BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039322
(708 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 148/288 (51%), Gaps = 16/288 (5%)
Query: 430 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKA 489
E+ A+++F + +G GG G VY+ L G +VA+K+ + +F EV+
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEE---RXQGGELQFQTEVEM 88
Query: 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-LGWSQRMNVIKGV 548
++ HRN+++ GFC LVY + GS+A+ L +Q L W +R + G
Sbjct: 89 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 148
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN-WTEFAGTYG 607
A L+YLH C P I+H+D+ + N+LLD E+EA V DFG+AK + + + GT G
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 608 YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS---------LNTDIA 658
++APE T K +EK DV+ +GV++LE I G+ D L + L +
Sbjct: 209 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 268
Query: 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
L+ ++D L + E++ +++VA C SP RP M V + +
Sbjct: 269 LEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 147/288 (51%), Gaps = 16/288 (5%)
Query: 430 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKA 489
E+ A+++F + +G GG G VY+ L G +VA+K+ + +F EV+
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQ---GGELQFQTEVEM 80
Query: 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-LGWSQRMNVIKGV 548
++ HRN+++ GFC LVY + GS+A+ L +Q L W +R + G
Sbjct: 81 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 140
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN-WTEFAGTYG 607
A L+YLH C P I+H+D+ + N+LLD E+EA V DFG+AK + + + G G
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIG 200
Query: 608 YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS---------LNTDIA 658
++APE T K +EK DV+ +GV++LE I G+ D L + L +
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 260
Query: 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
L+ ++D L + E++ +++VA C SP RP M V + +
Sbjct: 261 LEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 145/282 (51%), Gaps = 23/282 (8%)
Query: 430 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKA 489
++ ATN+FD ++ IG+G G VY+ L G VA+K+ +P + +EF E++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTP---ESSQGIEEFETEIET 88
Query: 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAA-ILSSDTAAQELGWSQRMNVIKGV 548
L+ RH ++V GFC L+Y+ +E G+L + SD + W QR+ + G
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF----AG 604
A L YLH I+H+D+ S N+LLD + + DFGI+K K + T G
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKG 203
Query: 605 TYGYVAPELAYTMKITEKCDVYSFGVLVLE------AIKGKHPRDFLSLIS-SSSLNTDI 657
T GY+ PE ++TEK DVYSFGV++ E AI PR+ ++L + + +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 658 ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTM 699
L++I+DP L R E L + A CL S E RP+M
Sbjct: 264 QLEQIVDPNLADKIRP--ESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 144/282 (51%), Gaps = 23/282 (8%)
Query: 430 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKA 489
++ ATN+FD ++ IG+G G VY+ L G VA+K+ +P + +EF E++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTP---ESSQGIEEFETEIET 88
Query: 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAA-ILSSDTAAQELGWSQRMNVIKGV 548
L+ RH ++V GFC L+Y+ +E G+L + SD + W QR+ + G
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----G 604
A L YLH I+H+D+ S N+LLD + + DFGI+K K T G
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKG 203
Query: 605 TYGYVAPELAYTMKITEKCDVYSFGVLVLE------AIKGKHPRDFLSLIS-SSSLNTDI 657
T GY+ PE ++TEK DVYSFGV++ E AI PR+ ++L + + +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 658 ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTM 699
L++I+DP L R E L + A CL S E RP+M
Sbjct: 264 QLEQIVDPNLADKIRP--ESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 173/410 (42%), Gaps = 70/410 (17%)
Query: 1 MRSLSILDLNQNQFKGVLPPSVSNLT-NLKELVLLYNNLSGFIPPSL-ENPMLTRPGLDF 58
MR L +LDL+ N+F G LP S++NL+ +L L L NN SG I P+L +NP T
Sbjct: 339 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT------ 392
Query: 59 NHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALG 118
LQ + N F G IP L NCS L+ + L+ N L+G I +LG
Sbjct: 393 ----------------LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG 436
Query: 119 IYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSL 178
L + L N GEI L TL + N++TG IP + N + L + LS
Sbjct: 437 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN 496
Query: 179 NHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPEXXX 238
N + GEIPK +G+L +L L L N F+G +P E+G L +LDL+ N FN ++P
Sbjct: 497 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Query: 239 XXXXXXXX----------------------XXXXXQFXXXXXXXXXXXXXXSELDASHNL 276
+F + + + +
Sbjct: 557 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 616
Query: 277 FGGEIPFQICSLKSLEKLNLSHNNLSG------------------------SIPNCFEGI 312
+GG + S+ L++S+N LSG SIP+ +
Sbjct: 617 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 676
Query: 313 RGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGGVKGMQPCKVF 362
RG++++D+S N+L G +P + + E N L G + M + F
Sbjct: 677 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETF 726
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 151/333 (45%), Gaps = 56/333 (16%)
Query: 4 LSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDF--NHF 61
L +L+++ NQF G +PP L +L+ L L N +G IP L T GLD NHF
Sbjct: 246 LKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHF 303
Query: 62 TSYLP-------------------------HNVCRGGALQYFGVSENHFQGTIPKILRNC 96
+P + + L+ +S N F G +P+ L N
Sbjct: 304 YGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 363
Query: 97 S-SLIRVRLNSNNLTGNISEALGIYPNLTFIDL--SRNDFYGEISSNWGKCPKLGTLNVS 153
S SL+ + L+SNN +G I L P T +L N F G+I C +L +L++S
Sbjct: 364 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 423
Query: 154 MNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEI 213
N ++G IP +G+ S+L+ L L LN + GEIP+EL + +L LIL N TG +P +
Sbjct: 424 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
Query: 214 GSLVDLEYLDLSANRFNNSVPEXXXXXXXXXXXXXXXXQFXXXXXXXXXXXXXXSELDAS 273
+ +L ++ LS NR +P+ L S
Sbjct: 484 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAI------------------------LKLS 519
Query: 274 HNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIP 306
+N F G IP ++ +SL L+L+ N +G+IP
Sbjct: 520 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 186/434 (42%), Gaps = 71/434 (16%)
Query: 3 SLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFT 62
+L LD++ N+ G ++S T LK L + N G IPP
Sbjct: 221 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP------------------ 262
Query: 63 SYLPHNVCRGGALQYFGVSENHFQGTIPKILRN-CSSLIRVRLNSNNLTGNISEALGIYP 121
LP +LQY ++EN F G IP L C +L + L+ N+ G + G
Sbjct: 263 --LPLK-----SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 315
Query: 122 NLTFIDLSRNDFYGEISSN-WGKCPKLGTLNVSMNNITGGIPREIGN-SSQLQALDLSLN 179
L + LS N+F GE+ + K L L++S N +G +P + N S+ L LDLS N
Sbjct: 316 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 375
Query: 180 HIVGEIPKELGK--LNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPEXX 237
+ G I L + N+L EL L+ N FTG++PP + + +L L LS N + ++P
Sbjct: 376 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Query: 238 XXXXXXXXXXXXXXQFXXXXXXXXXXXXXXSELDASHNLFGGEIPFQICSLKSLEKLNLS 297
+L N+ GEIP ++ +K+LE L L
Sbjct: 436 GSLSKLR------------------------DLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 298 HNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTA-FRNAPVEALKGNKGLCGGVKG- 355
N+L+G IP+ ++ I +S+N+L G +P N + L N G +
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS-NNSFSGNIPAE 530
Query: 356 MQPCKVFLSHKQNSRVKWFAIVFPVLGALFLSMALIAI-FILRKR----KSDSGDRQSSN 410
+ C+ + N+ + F P A+F IA FI KR K+D ++
Sbjct: 531 LGDCRSLIWLDLNTNL--FNGTIPA--AMFKQSGKIAANFIAGKRYVYIKNDGMKKEC-- 584
Query: 411 QNPHGLFSILNFEG 424
HG ++L F+G
Sbjct: 585 ---HGAGNLLEFQG 595
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 21/238 (8%)
Query: 104 LNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEIS--SNWGKCPKLGTLNVSMNNITGGI 161
L+++++ G++S +LT +DLSRN G ++ ++ G C L LNVS N +
Sbjct: 81 LSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--F 137
Query: 162 PREIGNS---SQLQALDLSLN-----HIVGEIPKELGKLNSLTELILRGNQFTGRLPPEI 213
P ++ + L+ LDLS N ++VG + + L L + GN+ +G + ++
Sbjct: 138 PGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSD--GCGELKHLAISGNKISGDV--DV 193
Query: 214 GSLVDLEYLDLSANRFNNSVPEXXXXXXXXXXXXXXXXQFXXXXXXXXXXXXXXSELDAS 273
V+LE+LD+S+N F+ +P + L+ S
Sbjct: 194 SRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 252
Query: 274 HNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEG-IRGISVIDISDNQLQGPVP 330
N F G IP LKSL+ L+L+ N +G IP+ G ++ +D+S N G VP
Sbjct: 253 SNQFVGPIP--PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 173/410 (42%), Gaps = 70/410 (17%)
Query: 1 MRSLSILDLNQNQFKGVLPPSVSNLT-NLKELVLLYNNLSGFIPPSL-ENPMLTRPGLDF 58
MR L +LDL+ N+F G LP S++NL+ +L L L NN SG I P+L +NP T
Sbjct: 342 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT------ 395
Query: 59 NHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALG 118
LQ + N F G IP L NCS L+ + L+ N L+G I +LG
Sbjct: 396 ----------------LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG 439
Query: 119 IYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSL 178
L + L N GEI L TL + N++TG IP + N + L + LS
Sbjct: 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN 499
Query: 179 NHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPEXXX 238
N + GEIPK +G+L +L L L N F+G +P E+G L +LDL+ N FN ++P
Sbjct: 500 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Query: 239 XXXXXXXX----------------------XXXXXQFXXXXXXXXXXXXXXSELDASHNL 276
+F + + + +
Sbjct: 560 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619
Query: 277 FGGEIPFQICSLKSLEKLNLSHNNLSG------------------------SIPNCFEGI 312
+GG + S+ L++S+N LSG SIP+ +
Sbjct: 620 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 679
Query: 313 RGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGGVKGMQPCKVF 362
RG++++D+S N+L G +P + + E N L G + M + F
Sbjct: 680 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETF 729
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 151/333 (45%), Gaps = 56/333 (16%)
Query: 4 LSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDF--NHF 61
L +L+++ NQF G +PP L +L+ L L N +G IP L T GLD NHF
Sbjct: 249 LKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHF 306
Query: 62 TSYLP-------------------------HNVCRGGALQYFGVSENHFQGTIPKILRNC 96
+P + + L+ +S N F G +P+ L N
Sbjct: 307 YGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 366
Query: 97 S-SLIRVRLNSNNLTGNISEALGIYPNLTFIDL--SRNDFYGEISSNWGKCPKLGTLNVS 153
S SL+ + L+SNN +G I L P T +L N F G+I C +L +L++S
Sbjct: 367 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426
Query: 154 MNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEI 213
N ++G IP +G+ S+L+ L L LN + GEIP+EL + +L LIL N TG +P +
Sbjct: 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
Query: 214 GSLVDLEYLDLSANRFNNSVPEXXXXXXXXXXXXXXXXQFXXXXXXXXXXXXXXSELDAS 273
+ +L ++ LS NR +P+ L S
Sbjct: 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAI------------------------LKLS 522
Query: 274 HNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIP 306
+N F G IP ++ +SL L+L+ N +G+IP
Sbjct: 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 186/434 (42%), Gaps = 71/434 (16%)
Query: 3 SLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFT 62
+L LD++ N+ G ++S T LK L + N G IPP
Sbjct: 224 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP------------------ 265
Query: 63 SYLPHNVCRGGALQYFGVSENHFQGTIPKILRN-CSSLIRVRLNSNNLTGNISEALGIYP 121
LP +LQY ++EN F G IP L C +L + L+ N+ G + G
Sbjct: 266 --LPLK-----SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318
Query: 122 NLTFIDLSRNDFYGEISSN-WGKCPKLGTLNVSMNNITGGIPREIGN-SSQLQALDLSLN 179
L + LS N+F GE+ + K L L++S N +G +P + N S+ L LDLS N
Sbjct: 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 378
Query: 180 HIVGEIPKELGK--LNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPEXX 237
+ G I L + N+L EL L+ N FTG++PP + + +L L LS N + ++P
Sbjct: 379 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Query: 238 XXXXXXXXXXXXXXQFXXXXXXXXXXXXXXSELDASHNLFGGEIPFQICSLKSLEKLNLS 297
+L N+ GEIP ++ +K+LE L L
Sbjct: 439 GSLSKLR------------------------DLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 298 HNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTA-FRNAPVEALKGNKGLCGGVKG- 355
N+L+G IP+ ++ I +S+N+L G +P N + L N G +
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS-NNSFSGNIPAE 533
Query: 356 MQPCKVFLSHKQNSRVKWFAIVFPVLGALFLSMALIAI-FILRKR----KSDSGDRQSSN 410
+ C+ + N+ + F P A+F IA FI KR K+D ++
Sbjct: 534 LGDCRSLIWLDLNTNL--FNGTIPA--AMFKQSGKIAANFIAGKRYVYIKNDGMKKEC-- 587
Query: 411 QNPHGLFSILNFEG 424
HG ++L F+G
Sbjct: 588 ---HGAGNLLEFQG 598
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 123 LTFIDLSRNDFYGEIS--SNWGKCPKLGTLNVSMNNITGGIPREIGNS---SQLQALDLS 177
LT +DLSRN G ++ ++ G C L LNVS N + P ++ + L+ LDLS
Sbjct: 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLS 159
Query: 178 LN-----HIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNS 232
N ++VG + + L L + GN+ +G + ++ V+LE+LD+S+N F+
Sbjct: 160 ANSISGANVVGWVLSD--GCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTG 215
Query: 233 VPEXXXXXXXXXXXXXXXXQFXXXXXXXXXXXXXXSELDASHNLFGGEIPFQICSLKSLE 292
+P + L+ S N F G IP LKSL+
Sbjct: 216 IP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP--PLPLKSLQ 272
Query: 293 KLNLSHNNLSGSIPNCFEG-IRGISVIDISDNQLQGPVP 330
L+L+ N +G IP+ G ++ +D+S N G VP
Sbjct: 273 YLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 141/290 (48%), Gaps = 24/290 (8%)
Query: 430 EIVRATNDFDAQYC------IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEF 483
E+ TN+FD + +G GG G VY+ + + VA+KK + + +++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 484 LIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN 543
E+K + + +H N+V+ GF S LVY + GSL LS L W R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 544 VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTE 601
+ +G A+ +++LH + +H+DI S N+LLD + A ++DFG+A+ + ++ +
Sbjct: 138 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR 194
Query: 602 FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKG-------KHPRDFLSLISSSSLN 654
GT Y+APE A +IT K D+YSFGV++LE I G + P+ L +
Sbjct: 195 IVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253
Query: 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D I S SV+ ++ VA CL+E RP +K V Q
Sbjct: 254 EKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 140/290 (48%), Gaps = 24/290 (8%)
Query: 430 EIVRATNDFDAQYC------IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEF 483
E+ TN+FD + +G GG G VY+ + + VA+KK + + +++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 484 LIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN 543
E+K + + +H N+V+ GF S LVY + GSL LS L W R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 544 VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTE 601
+ +G A+ +++LH + +H+DI S N+LLD + A ++DFG+A+ + ++
Sbjct: 138 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR 194
Query: 602 FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKG-------KHPRDFLSLISSSSLN 654
GT Y+APE A +IT K D+YSFGV++LE I G + P+ L +
Sbjct: 195 IVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253
Query: 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D I S SV+ ++ VA CL+E RP +K V Q
Sbjct: 254 EKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 144/296 (48%), Gaps = 30/296 (10%)
Query: 420 LNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIK-----KFHSPLPC 474
L F+G + D++ D + + IG G G+V+RAE G VA+K FH+
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA---- 75
Query: 475 DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQ 534
EFL EV + +RH NIV F G + + +V E L RGSL +L A +
Sbjct: 76 ---ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132
Query: 535 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594
+L +R+++ VA ++YLH+ PPIVH+D+ S NLL+D +Y V DFG+++
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS 191
Query: 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLS---LISSS 651
AGT ++APE+ EK DVYSFGV++ E + P L+ ++++
Sbjct: 192 XFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
Query: 652 SLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707
RL P R++ ++ +I+E C P RP+ + +R
Sbjct: 252 GFKCK---------RLEIP-RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 139/290 (47%), Gaps = 24/290 (8%)
Query: 430 EIVRATNDFDAQYC------IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEF 483
E+ TN+FD + +G GG G VY+ + + VA+KK + + +++F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 71
Query: 484 LIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN 543
E+K + + +H N+V+ GF S LVY + GSL LS L W R
Sbjct: 72 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 131
Query: 544 VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTE 601
+ +G A+ +++LH + +H+DI S N+LLD + A ++DFG+A+ + +
Sbjct: 132 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR 188
Query: 602 FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKG-------KHPRDFLSLISSSSLN 654
GT Y+APE A +IT K D+YSFGV++LE I G + P+ L +
Sbjct: 189 IVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 247
Query: 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D I S SV+ ++ VA CL+E RP +K V Q
Sbjct: 248 EKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQ 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 34/298 (11%)
Query: 420 LNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIK-----KFHSPLPC 474
L F+G + D++ D + + IG G G+V+RAE G VA+K FH+
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA---- 75
Query: 475 DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQ 534
EFL EV + +RH NIV F G + + +V E L RGSL +L A +
Sbjct: 76 ---ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132
Query: 535 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK---- 590
+L +R+++ VA ++YLH+ PPIVH+++ S NLL+D +Y V DFG+++
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191
Query: 591 -FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLIS 649
FL +S+ AGT ++APE+ EK DVYSFGV++ E + P L+
Sbjct: 192 TFLSSKSA-----AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
Query: 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707
+A RL P R++ ++ +I+E C P RP+ + +R
Sbjct: 247 V------VAAVGFKCKRLEIP-RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 135/290 (46%), Gaps = 24/290 (8%)
Query: 430 EIVRATNDFDAQYC------IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEF 483
E+ TN+FD + G GG G VY+ + + VA+KK + + +++F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 68
Query: 484 LIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN 543
E+K + +H N+V+ GF S LVY GSL LS L W R
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCK 128
Query: 544 VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTE 601
+ +G A+ +++LH + +H+DI S N+LLD + A ++DFG+A+ + + +
Sbjct: 129 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR 185
Query: 602 FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKG-------KHPRDFLSLISSSSLN 654
GT Y APE A +IT K D+YSFGV++LE I G + P+ L +
Sbjct: 186 IVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 244
Query: 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D I S SV+ + VA CL+E RP +K V Q
Sbjct: 245 EKTIEDYIDKKXNDADSTSVE----AXYSVASQCLHEKKNKRPDIKKVQQ 290
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 35/271 (12%)
Query: 444 IGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G + +G+V+ +K+ + D+ Q+ FL EVK + + H N++KF
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKEL---IRFDE-ETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G + + E ++ G+L I+ S + WSQR++ K +A ++YLH
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHS---MN 128
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFL--------------KPESSNWTEFAGTYGY 608
I+H+D++S N L+ VADFG+A+ + KP+ G +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 609 VAPELAYTMKITEKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALDEILDPRL 667
+APE+ EK DV+SFG+++ E I + D+L LN LD P
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNC 248
Query: 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPT 698
PP S + C + PE RP+
Sbjct: 249 PP----------SFFPITVRCCDLDPEKRPS 269
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 29/273 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQ--KEFLIEVKALTEIRHRNIVKF 501
IG GG G VYRA +V H P D+ Q + E K ++H NI+
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDP---DEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
G C + LV E G L +LS ++ +N +A ++YLH +
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI----LVNWAVQIARGMNYLHDEAIV 127
Query: 562 PIVHQDISSKNLLLDLEYE--------AHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
PI+H+D+ S N+L+ + E + DFG+A+ + + AG Y ++APE+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYAWMAPEV 185
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673
++ DV+S+GVL+ E + G+ P I ++ +A++++ LP PS +
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP---FRGIDGLAVAYGVAMNKL---ALPIPS-T 238
Query: 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
E +ME C N P SRP+ + Q+
Sbjct: 239 CPEPFAKLME---DCWNPDPHSRPSFTNILDQL 268
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 27/261 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G+G G V + VA+K + + EF E + + ++ H +VKFYG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-----EGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
CS ++V E + G L L S E SQ + + V + +++L F
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP--SQLLEMCYDVCEGMAFLESHQF--- 125
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPE---SSNWTEFAGTYGYVAPELAYTMKIT 620
+H+D++++N L+D + V+DFG+ +++ + SS T+F + APE+ + K +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS--APEVFHYFKYS 183
Query: 621 EKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679
K DV++FG+L+ E GK P D + N+++ L RL P +
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDLYT-------NSEVVLKVSQGHRLYRPHLASD---- 232
Query: 680 SIMEVAFSCLNESPESRPTMK 700
+I ++ +SC +E PE RPT +
Sbjct: 233 TIYQIMYSCWHELPEKRPTFQ 253
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 38/283 (13%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
+ + + +G G G V +A+ + VAIK+ S +++K F++E++ L+ + H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE------SERKAFIVELRQLSRVNH 60
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD------TAAQELGWSQRMNVIKGVA 549
NIVK YG C + LV E E GSL +L TAA + W + +GVA
Sbjct: 61 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGVA 116
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGY 608
YLH ++H+D+ NLLL + DFG A ++ +N G+ +
Sbjct: 117 ----YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAW 169
Query: 609 VAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+APE+ +EKCDV+S+G+++ E I + P D I + A+ + P
Sbjct: 170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVH---NGTRP 223
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTM----KVVTQQVR 707
P +++ + + S+M C ++ P RP+M K++T +R
Sbjct: 224 PLIKNLPKPIESLMT---RCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI-EVKALTEIRHRNIVKF 501
IG G G+VY A ++ +GQ VAI++ + Q +KE +I E+ + E ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELIINEILVMRENKNPNIVNY 82
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
++V E L GSL +++ +T E Q V + AL +LH +
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDE---GQIAAVCRECLQALEFLHSN--- 135
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
++H+DI S N+LL ++ + DFG + PE S +E GT ++APE+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 622 KCDVYSFGVLVLEAIKGKHP 641
K D++S G++ +E I+G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 38/283 (13%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
+ + + +G G G V +A+ + VAIK+ S +++K F++E++ L+ + H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE------SERKAFIVELRQLSRVNH 61
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD------TAAQELGWSQRMNVIKGVA 549
NIVK YG C + LV E E GSL +L TAA + W + +GVA
Sbjct: 62 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGVA 117
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGY 608
YLH ++H+D+ NLLL + DFG A ++ +N G+ +
Sbjct: 118 ----YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAW 170
Query: 609 VAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+APE+ +EKCDV+S+G+++ E I + P D I + A+ + P
Sbjct: 171 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVH---NGTRP 224
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTM----KVVTQQVR 707
P +++ + + S+M C ++ P RP+M K++T +R
Sbjct: 225 PLIKNLPKPIESLMT---RCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 24/283 (8%)
Query: 425 KLVYDEIVRATND-FDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKE 482
KL D + + + FD +G G +GSVY+A +GQ+VAIK+ +P + +D +E
Sbjct: 17 KLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQ----VPVE--SDLQE 70
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
+ E+ + + ++VK+YG ++V E GS++ I+ + L +
Sbjct: 71 IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR--LRNKTLTEDEIA 128
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
+++ L YLH F +H+DI + N+LL+ E A +ADFG+A L +
Sbjct: 129 TILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXV 185
Query: 603 AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662
GT ++APE+ + D++S G+ +E +GK P + + +
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI----------F 235
Query: 663 LDPRLPPPS-RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
+ P PPP+ R + + + CL +SPE R T + Q
Sbjct: 236 MIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 35/285 (12%)
Query: 429 DEIVRA-TNDFDAQYC-----IGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIA 478
+E VR + D Y IG G G V R L + VAIK Q
Sbjct: 3 NEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ-- 60
Query: 479 DQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW 538
++EFL E + + H NI++ G +++ ++ E +E G+L + L + +
Sbjct: 61 -RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--QFTV 117
Query: 539 SQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598
Q + +++G+A + YL + VH+D++++N+L++ V+DFG+++FL+ SS+
Sbjct: 118 IQLVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 599 WTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSS 652
TE + G + APE K T D +S+G+++ E + G+ P +S
Sbjct: 175 PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS------ 228
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRP 697
N D+ D RLPPP + S+ ++ C + +RP
Sbjct: 229 -NQDVINAIEQDYRLPPPP----DCPTSLHQLMLDCWQKDRNARP 268
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 46/286 (16%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G G G V+ AE +VA+K P +A +K+F E + LT ++H +
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEH 78
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQRMNV 544
IVKFYG C +V+E ++ G L L + A ELG SQ +++
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 545 IKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG 604
+A + YL F VH+D++++N L+ + DFG+++ + S+++ G
Sbjct: 139 ASQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRDVY--STDYYRVGG 193
Query: 605 T----YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIAL 659
++ PE K T + DV+SFGV++ E GK P +S++ + I
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP---WFQLSNTEVIECITQ 250
Query: 660 DEILD-PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
+L+ PR+ P + +V C P+ R +K + +
Sbjct: 251 GRVLERPRVCPK---------EVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI-EVKALTEIRHRNIVKF 501
IG G G+VY A ++ +GQ VAI++ + Q +KE +I E+ + E ++ NIV +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELIINEILVMRENKNPNIVNY 83
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
++V E L GSL +++ +T E Q V + AL +LH +
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDE---GQIAAVCRECLQALEFLHSN--- 136
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
++H+DI S N+LL ++ + DFG + PE S + GT ++APE+
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 622 KCDVYSFGVLVLEAIKGKHP 641
K D++S G++ +E I+G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI-EVKALTEIRHRNIVKF 501
IG G G+VY A ++ +GQ VAI++ + Q +KE +I E+ + E ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELIINEILVMRENKNPNIVNY 82
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
++V E L GSL +++ +T E Q V + AL +LH +
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDE---GQIAAVCRECLQALEFLHSN--- 135
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
++H+DI S N+LL ++ + DFG + PE S + GT ++APE+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 622 KCDVYSFGVLVLEAIKGKHP 641
K D++S G++ +E I+G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI-EVKALTEIRHRNIVKF 501
IG G G+VY A ++ +GQ VAI++ + Q +KE +I E+ + E ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELIINEILVMRENKNPNIVNY 82
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
++V E L GSL +++ +T E Q V + AL +LH +
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDE---GQIAAVCRECLQALEFLHSN--- 135
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
++H+DI S N+LL ++ + DFG + PE S + GT ++APE+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 622 KCDVYSFGVLVLEAIKGKHP 641
K D++S G++ +E I+G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 33/287 (11%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKF---HSPLPCDQIADQKEFLIEVKA 489
A N+ + + IG GG G V++ L + VVAIK S + I +EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVA 549
++ + H NIVK YG + +V E + G L L A + WS ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYE-----AHVADFGIAKFLKPESSNWTEFAG 604
+ Y+ + PPIVH+D+ S N+ L E A VADFG++ + + + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVHSVSGLLG 188
Query: 605 TYGYVAPEL--AYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662
+ ++APE A TEK D YSF +++ + G+ P D S +N + +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEG 246
Query: 663 LDPRLP---PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
L P +P PP +L +++E+ C + P+ RP + +++
Sbjct: 247 LRPTIPEDCPP------RLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A +L+ E G++ L + E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS TE GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEM 177
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A +L+ E RG + L + E + I +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANALS 127
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 33/287 (11%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKF---HSPLPCDQIADQKEFLIEVKA 489
A N+ + + IG GG G V++ L + VVAIK S + I +EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVA 549
++ + H NIVK YG + +V E + G L L A + WS ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYE-----AHVADFGIAKFLKPESSNWTEFAG 604
+ Y+ + PPIVH+D+ S N+ L E A VADFG + + + + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQSVHSVSGLLG 188
Query: 605 TYGYVAPEL--AYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662
+ ++APE A TEK D YSF +++ + G+ P D S +N + +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEG 246
Query: 663 LDPRLP---PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
L P +P PP +L +++E+ C + P+ RP + +++
Sbjct: 247 LRPTIPEDCPP------RLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 136/295 (46%), Gaps = 43/295 (14%)
Query: 436 NDFDAQYCIGNGGHGSVYRAE----LPS--GQVVAIKKFHSPLPCDQIADQKEFLIEVKA 489
D ++ +G G G V+ AE LP +VA+K + +++F E +
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAEL 96
Query: 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSS------------DTAAQELG 537
LT ++H++IV+F+G C+ R +V+E + G L L S D A LG
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
Q + V VA + YL F VH+D++++N L+ + DFG+++ + S+
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--ST 211
Query: 598 NWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSS 652
++ G ++ PE K T + DV+SFGV++ E GK P + L ++ +
Sbjct: 212 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--WYQLSNTEA 269
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707
++ E+ PR PP ++ +IM C P+ R ++K V +++
Sbjct: 270 IDCITQGRELERPRACPP------EVYAIMR---GCWQREPQQRHSIKDVHARLQ 315
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 43/290 (14%)
Query: 436 NDFDAQYCIGNGGHGSVYRAE----LPS--GQVVAIKKFHSPLPCDQIADQKEFLIEVKA 489
D ++ +G G G V+ AE LP +VA+K + +++F E +
Sbjct: 12 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAEL 67
Query: 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSS------------DTAAQELG 537
LT ++H++IV+F+G C+ R +V+E + G L L S D A LG
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
Q + V VA + YL F VH+D++++N L+ + DFG+++ + S+
Sbjct: 128 LGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--ST 182
Query: 598 NWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSS 652
++ G ++ PE K T + DV+SFGV++ E GK P + L ++ +
Sbjct: 183 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--WYQLSNTEA 240
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVV 702
++ E+ PR PP ++ +IM C P+ R ++K V
Sbjct: 241 IDCITQGRELERPRACPP------EVYAIMR---GCWQREPQQRHSIKDV 281
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 43/290 (14%)
Query: 436 NDFDAQYCIGNGGHGSVYRAE----LPS--GQVVAIKKFHSPLPCDQIADQKEFLIEVKA 489
D ++ +G G G V+ AE LP +VA+K + +++F E +
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAEL 73
Query: 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSS------------DTAAQELG 537
LT ++H++IV+F+G C+ R +V+E + G L L S D A LG
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
Q + V VA + YL F VH+D++++N L+ + DFG+++ + S+
Sbjct: 134 LGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--ST 188
Query: 598 NWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSS 652
++ G ++ PE K T + DV+SFGV++ E GK P + L ++ +
Sbjct: 189 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--WYQLSNTEA 246
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVV 702
++ E+ PR PP ++ +IM C P+ R ++K V
Sbjct: 247 IDCITQGRELERPRACPP------EVYAIMR---GCWQREPQQRHSIKDV 287
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI-EVKALTEIRHRNIVKF 501
IG G G+VY A ++ +GQ VAI++ + Q +KE +I E+ + E ++ NIV +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELIINEILVMRENKNPNIVNY 83
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
++V E L GSL +++ +T E Q V + AL +LH +
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDE---GQIAAVCRECLQALEFLHSN--- 136
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
++H++I S N+LL ++ + DFG + PE S + GT ++APE+
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 622 KCDVYSFGVLVLEAIKGKHP 641
K D++S G++ +E I+G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 137/291 (47%), Gaps = 29/291 (9%)
Query: 420 LNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIA 478
L F+G YD+ D ++ +G G +G VY + VA+K +
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTM 64
Query: 479 DQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW 538
+ +EFL E + EI+H N+V+ G C+ +++ E + G+L L + QE+
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNA 123
Query: 539 SQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598
+ + ++ A+ YL F +H+D++++N L+ + VADFG+++ + ++
Sbjct: 124 VVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-- 178
Query: 599 WTEFAGT---YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSL 653
+T AG + APE LAY K + K DV++FGVL+ E A G P + L L
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 237
Query: 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
L++ D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 238 -----LEK--DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 277
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G V R L + VAIK Q ++EFL E + + H NI+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ---RREFLSEASIMGQFEHPNII 78
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G +++ ++ E +E G+L + L + + Q + +++G+A + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--QFTVIQLVGMLRGIASGMRYLAEMS 136
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYG-----YVAPELA 614
+ VH+D++++N+L++ V+DFG+++FL+ SS+ T + G + APE
Sbjct: 137 Y---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 615 YTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673
K T D +S+G+++ E + G+ P +S N D+ D RLPPP
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS-------NQDVINAIEQDYRLPPPP-- 244
Query: 674 VQEKLISIMEVAFSCLNESPESRP 697
+ S+ ++ C + +RP
Sbjct: 245 --DCPTSLHQLMLDCWQKDRNARP 266
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 133/284 (46%), Gaps = 38/284 (13%)
Query: 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+D++ Q IG+G V A P + VAIK+ + C D E L E++A+++
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE-KCQTSMD--ELLKEIQAMSQCH 71
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-----LGWSQRMNVIKGVA 549
H NIV +Y +LV +LL GS+ I+ A E L S +++ V
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK-----PESSNWTEFAG 604
+ L YLH + +H+D+ + N+LL + +ADFG++ FL + F G
Sbjct: 132 EGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 605 TYGYVAPELAYTMKITE-KCDVYSFGVLVLEAIKGKHPRD--------FLSLISS-SSLN 654
T ++APE+ ++ + K D++SFG+ +E G P L+L + SL
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248
Query: 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPT 698
T + E+L +S + K+IS+ CL + PE RPT
Sbjct: 249 TGVQDKEMLKKY----GKSFR-KMISL------CLQKDPEKRPT 281
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 133/284 (46%), Gaps = 38/284 (13%)
Query: 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+D++ Q IG+G V A P + VAIK+ + C D E L E++A+++
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE-KCQTSMD--ELLKEIQAMSQCH 66
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-----LGWSQRMNVIKGVA 549
H NIV +Y +LV +LL GS+ I+ A E L S +++ V
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK-----PESSNWTEFAG 604
+ L YLH + +H+D+ + N+LL + +ADFG++ FL + F G
Sbjct: 127 EGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 605 TYGYVAPELAYTMKITE-KCDVYSFGVLVLEAIKGKHPRD--------FLSLISS-SSLN 654
T ++APE+ ++ + K D++SFG+ +E G P L+L + SL
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 243
Query: 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPT 698
T + E+L +S + K+IS+ CL + PE RPT
Sbjct: 244 TGVQDKEMLKKY----GKSFR-KMISL------CLQKDPEKRPT 276
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T+ GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T+ GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 182
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T+ GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 178
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V + VAIK + + EF+ E K + + H +V+ YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
C+ R F++ E + G L L Q + + K V +A+ YL F
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 141
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYG------YVAPELAYTM 617
+H+D++++N L++ + V+DFG+++++ + E+ + G + PE+
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 196
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
K + K D+++FGVL+ E GK P + + N++ A RL P + E
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPHLA-SE 248
Query: 677 KLISIMEVAFSCLNESPESRPTMKVVTQQV 706
K+ +IM +SC +E + RPT K++ +
Sbjct: 249 KVYTIM---YSCWHEKADERPTFKILLSNI 275
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T+ GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 33/287 (11%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKF---HSPLPCDQIADQKEFLIEVKA 489
A N+ + + IG GG G V++ L + VVAIK S + I +EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVA 549
++ + H NIVK YG + +V E + G L L A + WS ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYE-----AHVADFGIAKFLKPESSNWTEFAG 604
+ Y+ + PPIVH+D+ S N+ L E A VADF ++ + + + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQSVHSVSGLLG 188
Query: 605 TYGYVAPEL--AYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662
+ ++APE A TEK D YSF +++ + G+ P D S +N + +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEG 246
Query: 663 LDPRLP---PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
L P +P PP +L +++E+ C + P+ RP + +++
Sbjct: 247 LRPTIPEDCPP------RLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V + VAIK + + EF+ E K + + H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
C+ R F++ E + G L L Q + + K V +A+ YL F
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 126
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYG------YVAPELAYTM 617
+H+D++++N L++ + V+DFG+++++ + E+ + G + PE+
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 181
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
K + K D+++FGVL+ E GK P + + N++ A RL P + E
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPHLA-SE 233
Query: 677 KLISIMEVAFSCLNESPESRPTMKVV 702
K+ +IM +SC +E + RPT K++
Sbjct: 234 KVYTIM---YSCWHEKADERPTFKIL 256
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A +L+ E RG + L + E + I +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANALS 127
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEM 182
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 27/263 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V + VAIK + + EF+ E K + + H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
C+ R F++ E + G L L Q + + K V +A+ YL F
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 126
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPE---SSNWTEFAGTYGYVAPELAYTMKIT 620
+H+D++++N L++ + V+DFG+++++ + SS ++F + PE+ K +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWS--PPEVLMYSKFS 184
Query: 621 EKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679
K D+++FGVL+ E GK P + + N++ A RL P + EK+
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPHLA-SEKVY 236
Query: 680 SIMEVAFSCLNESPESRPTMKVV 702
+IM +SC +E + RPT K++
Sbjct: 237 TIM---YSCWHEKADERPTFKIL 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 92 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 203
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 125/267 (46%), Gaps = 27/267 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V + VAIK + + EF+ E K + + H +V+ YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
C+ R F++ E + G L L Q + + K V +A+ YL F
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 141
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFL---KPESSNWTEFAGTYGYVAPELAYTMKIT 620
+H+D++++N L++ + V+DFG+++++ + SS ++F + PE+ K +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWS--PPEVLMYSKFS 199
Query: 621 EKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679
K D+++FGVL+ E GK P + + N++ A RL P + EK+
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPHLA-SEKVY 251
Query: 680 SIMEVAFSCLNESPESRPTMKVVTQQV 706
+IM +SC +E + RPT K++ +
Sbjct: 252 TIM---YSCWHEKADERPTFKILLSNI 275
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V + VAIK + + EF+ E K + + H +V+ YG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
C+ R F++ E + G L L Q + + K V +A+ YL F
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 132
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYG------YVAPELAYTM 617
+H+D++++N L++ + V+DFG+++++ + E+ + G + PE+
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 187
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
K + K D+++FGVL+ E GK P + + N++ A RL P + E
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPHLA-SE 239
Query: 677 KLISIMEVAFSCLNESPESRPTMKVV 702
K+ +IM +SC +E + RPT K++
Sbjct: 240 KVYTIM---YSCWHEKADERPTFKIL 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 177
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L +T + L Q +++ +A ++Y+ +
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVERMNY--- 132
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + WT G + APE A + T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 239
Query: 679 ISIMEVAFSCLNESPESRPTMK 700
S+ ++ C + PE RPT +
Sbjct: 240 -SLHDLMCQCWRKEPEERPTFE 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V + VAIK + + EF+ E K + + H +V+ YG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
C+ R F++ E + G L L Q + + K V +A+ YL F
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 125
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYG------YVAPELAYTM 617
+H+D++++N L++ + V+DFG+++++ + E+ + G + PE+
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 180
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
K + K D+++FGVL+ E GK P + + N++ A RL P + E
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPHLA-SE 232
Query: 677 KLISIMEVAFSCLNESPESRPTMKVV 702
K+ +IM +SC +E + RPT K++
Sbjct: 233 KVYTIM---YSCWHEKADERPTFKIL 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A +L+ E G++ L + E + I +A+ALS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 126
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 181
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V + VAIK + + EF+ E K + + H +V+ YG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
C+ R F++ E + G L L Q + + K V +A+ YL F
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 121
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYG------YVAPELAYTM 617
+H+D++++N L++ + V+DFG+++++ + E+ + G + PE+
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 176
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
K + K D+++FGVL+ E GK P + + N++ A RL P + E
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPHLA-SE 228
Query: 677 KLISIMEVAFSCLNESPESRPTMKVV 702
K+ +IM +SC +E + RPT K++
Sbjct: 229 KVYTIM---YSCWHEKADERPTFKIL 251
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A +L+ E G++ L + E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEM 177
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 65 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 176
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 83 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 194
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + SS T +GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEM 178
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G V+ + VAIK + +++F+ E + + ++ H +V+ YG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCF 560
C LV+E +E G L+ L + AA+ L + + V + ++YL C
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 126
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFL---KPESSNWTEFAGTYGYVAPELAYTM 617
++H+D++++N L+ V+DFG+ +F+ + SS T+F + +PE+
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 182
Query: 618 KITEKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ + K DV+SFGVL+ E +GK P + S N+++ D RL P R
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPYENRS-------NSEVVEDISTGFRLYKP-RLAST 234
Query: 677 KLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ IM C E PE RP + +Q+
Sbjct: 235 HVYQIMN---HCWRERPEDRPAFSRLLRQL 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A +L+ E G++ L + E + I +A+ALS
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 119
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G V+ + VAIK + +++F+ E + + ++ H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCF 560
C LV+E +E G L+ L + AA+ L + + V + ++YL C
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 123
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFL---KPESSNWTEFAGTYGYVAPELAYTM 617
++H+D++++N L+ V+DFG+ +F+ + SS T+F + +PE+
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 179
Query: 618 KITEKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ + K DV+SFGVL+ E +GK P + S N+++ D RL P R
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRS-------NSEVVEDISTGFRLYKP-RLAST 231
Query: 677 KLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ IM C E PE RP + +Q+
Sbjct: 232 HVYQIMN---HCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G V+ + VAIK + +++F+ E + + ++ H +V+ YG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCF 560
C LV+E +E G L+ L + AA+ L + + V + ++YL C
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 121
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFL---KPESSNWTEFAGTYGYVAPELAYTM 617
++H+D++++N L+ V+DFG+ +F+ + SS T+F + +PE+
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 177
Query: 618 KITEKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ + K DV+SFGVL+ E +GK P + S N+++ D RL P R
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRS-------NSEVVEDISTGFRLYKP-RLAST 229
Query: 677 KLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ IM C E PE RP + +Q+
Sbjct: 230 HVYQIMN---HCWKERPEDRPAFSRLLRQL 256
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 92 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS + GT Y+ PE+
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 203
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A +L+ E G++ L + E + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 180
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 129/267 (48%), Gaps = 29/267 (10%)
Query: 441 QYCIGNGGHGSVYRA--ELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR 496
+ IG G G V +LP + VAIK S Q +++FL E + + H
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ---RRDFLSEASIMGQFDHP 94
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
N++ G + + ++ E +E GSL + L + + Q + +++G+A + YL
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLA 152
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYG-----YVAP 611
+ VH+D++++N+L++ V+DFG+++FL+ ++S+ T + G + AP
Sbjct: 153 DMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 612 ELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670
E K T DV+S+G+++ E + G+ P + + + +N A+++ D RLPPP
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQDVIN---AIEQ--DYRLPPP 262
Query: 671 SRSVQEKLISIMEVAFSCLNESPESRP 697
++ ++ C + RP
Sbjct: 263 MDCPS----ALHQLMLDCWQKDRNHRP 285
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEX 182
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G V+ + VAIK + + +F+ E + + ++ H +V+ YG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-----EGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCF 560
C LV+E +E G L+ L + AA+ L + + V + ++YL C
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 143
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFL---KPESSNWTEFAGTYGYVAPELAYTM 617
++H+D++++N L+ V+DFG+ +F+ + SS T+F + +PE+
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 199
Query: 618 KITEKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ + K DV+SFGVL+ E +GK P + S N+++ D RL P R
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPYENRS-------NSEVVEDISTGFRLYKP-RLAST 251
Query: 677 KLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ IM C E PE RP + +Q+
Sbjct: 252 HVYQIMN---HCWKERPEDRPAFSRLLRQL 278
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +A+FG + + SS T GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 64
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 123
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 232
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 233 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 59
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 118
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----- 227
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 228 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 64
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 123
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 232
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 233 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 59
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 118
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 227
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 228 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 63
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 122
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 123 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 177
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 178 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 231
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 232 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 268
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 8/206 (3%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D++ Y IG G +G + S G+++ K+ + A+++ + EV L E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLREL 62
Query: 494 RHRNIVKFYGFCSHARHS--FLVYELLERGSLAAILSSDTAA-QELGWSQRMNVIKGVAD 550
+H NIV++Y ++ ++V E E G LA++++ T Q L + V+ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 551 ALSYLHH--DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGY 608
AL H D ++H+D+ N+ LD + + DFG+A+ L + EF GT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYY 182
Query: 609 VAPELAYTMKITEKCDVYSFGVLVLE 634
++PE M EK D++S G L+ E
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 59
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 118
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 227
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 228 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 64
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 123
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 232
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 233 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 8/204 (3%)
Query: 437 DFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
D++ Y IG G +G + S G+++ K+ + A+++ + EV L E++H
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELKH 64
Query: 496 RNIVKFYGFCSHARHS--FLVYELLERGSLAAILSSDTAA-QELGWSQRMNVIKGVADAL 552
NIV++Y ++ ++V E E G LA++++ T Q L + V+ + AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 553 SYLHH--DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
H D ++H+D+ N+ LD + + DFG+A+ L ++S F GT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMS 184
Query: 611 PELAYTMKITEKCDVYSFGVLVLE 634
PE M EK D++S G L+ E
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 8/204 (3%)
Query: 437 DFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
D++ Y IG G +G + S G+++ K+ + A+++ + EV L E++H
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELKH 64
Query: 496 RNIVKFYGFCSHARHS--FLVYELLERGSLAAILSSDTAA-QELGWSQRMNVIKGVADAL 552
NIV++Y ++ ++V E E G LA++++ T Q L + V+ + AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 553 SYLHH--DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
H D ++H+D+ N+ LD + + DFG+A+ L ++S F GT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 184
Query: 611 PELAYTMKITEKCDVYSFGVLVLE 634
PE M EK D++S G L+ E
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 64
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 123
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 232
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 233 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 64
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 123
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAK 178
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 232
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 233 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A +L+ E G++ L + E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 177
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 68 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +A+FG + + SS T GT Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 179
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 59
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 118
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----- 227
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 228 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 59
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 118
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 227
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 228 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 59
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 118
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 227
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 228 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 180
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 60
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 119
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ T AG
Sbjct: 120 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAK 174
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L
Sbjct: 175 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----- 228
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 229 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 68 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS GT Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 179
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 61
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 120
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 121 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 175
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 176 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 229
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 230 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 266
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 8/206 (3%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
DFD +G G G+VY A + + K ++ + + EV+ + +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
NI++ YG+ A +L+ E G++ L + E + I +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYC 128
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
H ++H+DI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A +L+ E G++ L + E + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 180
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 61
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 120
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 121 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 175
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 176 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 229
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 230 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 266
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 263
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 322
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H++++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 323 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 377
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 378 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 431
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 432 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 468
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + K ++ + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ A VY +LE L + + + I +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEM 178
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+A+ L+ PE++ +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 223
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP-- 272
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 273 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 266
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 325
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H++++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 326 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 380
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 381 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 434
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 435 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 471
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
A DF+ +G G G+VY A + + + K ++ + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ YG+ S VY +LE L + + + I +A+ALS
Sbjct: 66 RHPNILRLYGYF---HDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL E +ADFG + + SS GT Y+ PE+
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + GK P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 305
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 364
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H++++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 365 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 419
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 420 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 473
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 474 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 510
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+GNG G V+ VAIK + FL E + + +++H +V+ Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP-----GTMSPESFLEEAQIMKKLKHDKLVQLYA 71
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L D + L +++ VA ++Y+ +
Sbjct: 72 VVSE-EPIYIVTEYMNKGSLLDFLK-DGEGRALKLPNLVDMAAQVAAGMAYIERMNY--- 126
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
+H+D+ S N+L+ +ADFG+A+ + E + T G + APE A + T
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 621 EKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E + KG+ P +N L+++ R+P P Q+
Sbjct: 185 IKSDVWSFGILLTELVTKGRVP--------YPGMNNREVLEQVERGYRMPCP----QDCP 232
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
IS+ E+ C + PE RPT + +
Sbjct: 233 ISLHELMIHCWKKDPEERPTFEYL 256
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G V+ + VAIK + +++F+ E + + ++ H +V+ YG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCF 560
C LV E +E G L+ L + AA+ L + + V + ++YL C
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 124
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFL---KPESSNWTEFAGTYGYVAPELAYTM 617
++H+D++++N L+ V+DFG+ +F+ + SS T+F + +PE+
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 180
Query: 618 KITEKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ + K DV+SFGVL+ E +GK P + S N+++ D RL P R
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRS-------NSEVVEDISTGFRLYKP-RLAST 232
Query: 677 KLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ IM C E PE RP + +Q+
Sbjct: 233 HVYQIMN---HCWRERPEDRPAFSRLLRQL 259
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
F VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 168 F---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 223
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP-- 272
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 273 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L +T + L Q +++ +A ++Y+ +
Sbjct: 330 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 384
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY---GYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P + +N ++ LD++ R+P P +
Sbjct: 443 IKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVERGYRMPCPPECPE--- 491
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
S+ ++ C + PE RPT + +
Sbjct: 492 -SLHDLMCQCWRKEPEERPTFEYL 514
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 60
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 119
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 120 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAK 174
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L L++
Sbjct: 175 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 228
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 229 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 265
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 97
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 155
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 156 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 211
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDE--GYRLPPP-- 260
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 261 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 288
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 29/283 (10%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIE 486
YD+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 61
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 120
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 121 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAK 175
Query: 606 --YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
+ APE LAY K + K DV++FGVL+ E A G P + L L
Sbjct: 176 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----- 229
Query: 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 230 --DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 266
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 73
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L +T + L Q +++ +A ++Y+ +
Sbjct: 74 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 128
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 187 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 235
Query: 679 ISIMEVAFSCLNESPESRPTMK 700
S+ ++ C + PE RPT +
Sbjct: 236 -SLHDLMCQCWRKEPEERPTFE 256
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 80
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 139 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 194
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDE--GYRLPPP-- 243
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 244 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 271
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 80
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 139 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 194
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDE--GYRLPPP-- 243
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 244 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 271
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L +T + L Q +++ +A ++Y+ +
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 301
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P + +N ++ LD++ R+P P +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVERGYRMPCPPECPE--- 408
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
S+ ++ C + PE RPT + +
Sbjct: 409 -SLHDLMCQCWRKEPEERPTFEYL 431
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L +T + L Q +++ +A ++Y+ +
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVERMNY--- 132
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 239
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
S+ ++ C + PE RPT + +
Sbjct: 240 -SLHDLMCQCWRKEPEERPTFEYL 262
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L +T + L Q +++ +A ++Y+ +
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 301
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P + +N ++ LD++ R+P P +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVERGYRMPCPPECPE--- 408
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
S+ ++ C + PE RPT + +
Sbjct: 409 -SLHDLMCQCWRKEPEERPTFEYL 431
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 223
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP-- 272
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 273 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 223
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP-- 272
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 273 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 223
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP-- 272
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 273 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G V+ + VAIK + +++F+ E + + ++ H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCF 560
C LV+E +E G L+ L + AA+ L + + V + ++YL
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEE--- 121
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFL---KPESSNWTEFAGTYGYVAPELAYTM 617
++H+D++++N L+ V+DFG+ +F+ + SS T+F + +PE+
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 179
Query: 618 KITEKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ + K DV+SFGVL+ E +GK P + S N+++ D RL P R
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRS-------NSEVVEDISTGFRLYKP-RLAST 231
Query: 677 KLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ IM C E PE RP + +Q+
Sbjct: 232 HVYQIMN---HCWKERPEDRPAFSRLLRQL 258
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 223
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP-- 272
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 273 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L +T + L Q +++ +A ++Y+ +
Sbjct: 247 VVSE-EPIYIVGEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 301
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P + +N ++ LD++ R+P P +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVERGYRMPCPPECPE--- 408
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
S+ ++ C + PE RPT + +
Sbjct: 409 -SLHDLMCQCWRKEPEERPTFEYL 431
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 223
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP-- 272
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 273 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 107
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 165
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 166 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 221
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 222 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP-- 270
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 271 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 298
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+ + L+ PE++ +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 223
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP-- 272
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 273 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + +IRH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L + + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 242
Query: 679 ISIMEVAFSCLNESPESRPTMK 700
S+ ++ C + PE RPT +
Sbjct: 243 -SLHDLMCQCWRKDPEERPTFE 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 8/206 (3%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
DFD +G G G+VY A + + K ++ + + EV+ + +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
NI++ YG+ A +L+ E G++ L + E + I +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYC 128
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
H ++H+DI +NLLL E +ADFG + + SS GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++S GVL E + G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 128/267 (47%), Gaps = 29/267 (10%)
Query: 441 QYCIGNGGHGSVYRA--ELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR 496
+ IG G G V +LP + VAIK S Q +++FL E + + H
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ---RRDFLSEASIMGQFDHP 68
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
N++ G + + ++ E +E GSL + L + + Q + +++G+A + YL
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLA 126
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYG-----YVAP 611
+ VH+ ++++N+L++ V+DFG+++FL+ ++S+ T + G + AP
Sbjct: 127 DMNY---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 612 ELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670
E K T DV+S+G+++ E + G+ P + + + +N A+++ D RLPPP
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQDVIN---AIEQ--DYRLPPP 236
Query: 671 SRSVQEKLISIMEVAFSCLNESPESRP 697
++ ++ C + RP
Sbjct: 237 MDCPS----ALHQLMLDCWQKDRNHRP 259
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 122/264 (46%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L + + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+++ N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 242
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
S+ ++ C + PE RPT + +
Sbjct: 243 -SLHDLMCQCWRKDPEERPTFEYL 265
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 112/262 (42%), Gaps = 23/262 (8%)
Query: 444 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
YG +V EL GSL L LG R V VA+ + YL F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 136
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT---EFAGTYGYVAPELAYTM 617
+H+D++++NLLL + DFG+ + L ++ + + APE T
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ D + FGV + E G+ P ++ L S L+ E RLP P Q+
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 247
Query: 677 KLISIMEVAFSCLNESPESRPT 698
I V C PE RPT
Sbjct: 248 ----IYNVMVQCWAHKPEDRPT 265
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L + + L Q +++ +A ++Y+ +
Sbjct: 72 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 126
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 184
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 185 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 233
Query: 679 ISIMEVAFSCLNESPESRPTMK 700
S+ ++ C + PE RPT +
Sbjct: 234 -SLHDLMCQCWRKDPEERPTFE 254
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKK--FHSPLPCDQIADQKEFLIEVKALTEI 493
+DFD +G G G+VY A + + K F S L + + Q IE++ + +
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ--SHL 72
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ Y + + +L+ E RG L L E + ++ +ADAL
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALH 129
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLL+ + E +ADFG + + S GT Y+ PE+
Sbjct: 130 YCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEM 184
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHPRD 643
EK D++ GVL E + G P D
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L + + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 242
Query: 679 ISIMEVAFSCLNESPESRPTMK 700
S+ ++ C + PE RPT +
Sbjct: 243 -SLHDLMCQCWRKDPEERPTFE 263
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 112/262 (42%), Gaps = 23/262 (8%)
Query: 444 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
YG +V EL GSL L LG R V VA+ + YL F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 142
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT---EFAGTYGYVAPELAYTM 617
+H+D++++NLLL + DFG+ + L ++ + + APE T
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ D + FGV + E G+ P ++ L S L+ E RLP P Q+
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 253
Query: 677 KLISIMEVAFSCLNESPESRPT 698
I V C PE RPT
Sbjct: 254 ----IYNVMVQCWAHKPEDRPT 271
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 33/270 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G + ++ +V E +E GSL + L A + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD-- 165
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + +PE
Sbjct: 166 -MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIA 223
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A+DE RLPPP
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP-- 272
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ ++ ++ C + +RP + +
Sbjct: 273 --MDCPAALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 69
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L + + L Q +++ +A ++Y+ +
Sbjct: 70 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 124
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 182
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 183 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 231
Query: 679 ISIMEVAFSCLNESPESRPTMK 700
S+ ++ C + PE RPT +
Sbjct: 232 -SLHDLMCQCWRKDPEERPTFE 252
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKK--FHSPLPCDQIADQKEFLIEVKALTEI 493
+DFD +G G G+VY A + + K F S L + + Q IE++ + +
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ--SHL 71
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ Y + + +L+ E RG L L E + ++ +ADAL
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALH 128
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLL+ + E +ADFG + + S GT Y+ PE+
Sbjct: 129 YCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEM 183
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHPRD 643
EK D++ GVL E + G P D
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKK--FHSPLPCDQIADQKEFLIEVKALTEI 493
+DFD +G G G+VY A + + K F S L + + Q IE++ + +
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ--SHL 71
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
RH NI++ Y + + +L+ E RG L L E + ++ +ADAL
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALH 128
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLL+ + E +ADFG + + S GT Y+ PE+
Sbjct: 129 YCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEM 183
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHPRD 643
EK D++ GVL E + G P D
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 112/262 (42%), Gaps = 23/262 (8%)
Query: 444 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
YG +V EL GSL L LG R V VA+ + YL F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT---EFAGTYGYVAPELAYTM 617
+H+D++++NLLL + DFG+ + L ++ + + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ D + FGV + E G+ P ++ L S L+ E RLP P Q+
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 243
Query: 677 KLISIMEVAFSCLNESPESRPT 698
I V C PE RPT
Sbjct: 244 ----IYNVMVQCWAHKPEDRPT 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L + + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 242
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
S+ ++ C + PE RPT + +
Sbjct: 243 -SLHDLMCQCWRKDPEERPTFEYL 265
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLI--EVKALTEIRHRNIVK 500
IG G G V A + SG++VA+KK D Q+ L+ EV + + +H N+V+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y ++V E LE G+L I++ +E Q V V ALS LH
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG- 267
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
++H+DI S ++LL + ++DFG + E GT ++APEL +
Sbjct: 268 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 325
Query: 621 EKCDVYSFGVLVLEAIKGKHP 641
+ D++S G++V+E + G+ P
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPP 346
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 112/262 (42%), Gaps = 23/262 (8%)
Query: 444 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
YG +V EL GSL L LG R V VA+ + YL F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 136
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT---EFAGTYGYVAPELAYTM 617
+H+D++++NLLL + DFG+ + L ++ + + APE T
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ D + FGV + E G+ P ++ L S L+ E RLP P Q+
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 247
Query: 677 KLISIMEVAFSCLNESPESRPT 698
I V C PE RPT
Sbjct: 248 ----IYNVMVQCWAHKPEDRPT 265
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L + + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVCEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 242
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
S+ ++ C + PE RPT + +
Sbjct: 243 -SLHDLMCQCWRKDPEERPTFEYL 265
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 112/262 (42%), Gaps = 23/262 (8%)
Query: 444 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
YG +V EL GSL L LG R V VA+ + YL F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT---EFAGTYGYVAPELAYTM 617
+H+D++++NLLL + DFG+ + L ++ + + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ D + FGV + E G+ P ++ L S L+ E RLP P Q+
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 243
Query: 677 KLISIMEVAFSCLNESPESRPT 698
I V C PE RPT
Sbjct: 244 ----IYNVMVQCWAHKPEDRPT 261
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLI--EVKALTEIRHRNIVK 500
IG G G V A + SG++VA+KK D Q+ L+ EV + + +H N+V+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y ++V E LE G+L I++ +E Q V V ALS LH
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG- 190
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
++H+DI S ++LL + ++DFG + E GT ++APEL +
Sbjct: 191 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 621 EKCDVYSFGVLVLEAIKGKHP 641
+ D++S G++V+E + G+ P
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPP 269
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLI--EVKALTEIRHRNIVK 500
IG G G V A + SG++VA+KK D Q+ L+ EV + + +H N+V+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y ++V E LE G+L I++ +E Q V V ALS LH
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG- 145
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
++H+DI S ++LL + ++DFG + E GT ++APEL +
Sbjct: 146 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 203
Query: 621 EKCDVYSFGVLVLEAIKGKHP 641
+ D++S G++V+E + G+ P
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPP 224
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 26/260 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G G V++ + + QVVAIK D+I D ++ E+ L++ + K+Y
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSSYVTKYY 87
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G +++ E L GS +L A Q ++K + L YLH +
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSE---K 140
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
+H+DI + N+LL + + +ADFG+A L F GT ++APE+ K
Sbjct: 141 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 623 CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI--LDPRLPPPSRSVQEKLIS 680
D++S G+ +E KG+ P N+D+ + L P+ PP+ V + S
Sbjct: 201 ADIWSLGITAIELAKGEPP------------NSDMHPMRVLFLIPKNNPPTL-VGDFTKS 247
Query: 681 IMEVAFSCLNESPESRPTMK 700
E +CLN+ P RPT K
Sbjct: 248 FKEFIDACLNKDPSFRPTAK 267
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 441 QYCIGNGGHGSVYRAELP--SGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
Q IG G G VY+ L SG+ VAIK + Q D FL E + + H
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD---FLGEAGIMGQFSH 105
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
NI++ G S + ++ E +E G+L L E Q + +++G+A + YL
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYL 163
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAP 611
+ + VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + AP
Sbjct: 164 ANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT-YTTSGGKIPIRWTAP 219
Query: 612 ELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
E K T DV+SFG+++ E + G+ P
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLI--EVKALTEIRHRNIVK 500
IG G G V A + SG++VA+KK D Q+ L+ EV + + +H N+V+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y ++V E LE G+L I++ +E Q V V ALS LH
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG- 136
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
++H+DI S ++LL + ++DFG + E GT ++APEL +
Sbjct: 137 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 194
Query: 621 EKCDVYSFGVLVLEAIKGKHP 641
+ D++S G++V+E + G+ P
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPP 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLI--EVKALTEIRHRNIVK 500
IG G G V A + SG++VA+KK D Q+ L+ EV + + +H N+V+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y ++V E LE G+L I++ +E Q V V ALS LH
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG- 147
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
++H+DI S ++LL + ++DFG + E GT ++APEL +
Sbjct: 148 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 205
Query: 621 EKCDVYSFGVLVLEAIKGKHP 641
+ D++S G++V+E + G+ P
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPP 226
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 33/265 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G V R ++P + VAIK + Q +++FL E + + H NI+
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDFLSEASIMGQFDHPNII 78
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
G + + ++ E +E GSL A L + + Q + +++G+ + YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMS 136
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + APE
Sbjct: 137 Y---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIA 192
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A++E RLPPP
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-------NQDVIKAIEE--GYRLPPP-- 241
Query: 673 SVQEKLISIMEVAFSCLNESPESRP 697
+ I++ ++ C + RP
Sbjct: 242 --MDCPIALHQLMLDCWQKERSDRP 264
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 33/265 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G V R ++P + VAIK + Q +++FL E + + H NI+
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDFLSEASIMGQFDHPNII 72
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
G + + ++ E +E GSL A L + + Q + +++G+ + YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMS 130
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + APE
Sbjct: 131 Y---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIA 186
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A++E RLPPP
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-------NQDVIKAIEE--GYRLPPP-- 235
Query: 673 SVQEKLISIMEVAFSCLNESPESRP 697
+ I++ ++ C + RP
Sbjct: 236 --MDCPIALHQLMLDCWQKERSDRP 258
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLI--EVKALTEIRHRNIVK 500
IG G G V A + SG++VA+KK D Q+ L+ EV + + +H N+V+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y ++V E LE G+L I++ +E Q V V ALS LH
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG- 140
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
++H+DI S ++LL + ++DFG + E GT ++APEL +
Sbjct: 141 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 198
Query: 621 EKCDVYSFGVLVLEAIKGKHP 641
+ D++S G++V+E + G+ P
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPP 219
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 114/263 (43%), Gaps = 25/263 (9%)
Query: 444 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
YG +V EL GSL L LG R V VA+ + YL F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 142
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG----TYGYVAPELAYT 616
+H+D++++NLLL + DFG+ + L P++ + + + APE T
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 617 MKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
+ D + FGV + E G+ P ++ L S L+ E RLP P Q
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQ 252
Query: 676 EKLISIMEVAFSCLNESPESRPT 698
+ I V C PE RPT
Sbjct: 253 D----IYNVMVQCWAHKPEDRPT 271
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 114/263 (43%), Gaps = 25/263 (9%)
Query: 444 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
YG +V EL GSL L LG R V VA+ + YL F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG----TYGYVAPELAYT 616
+H+D++++NLLL + DFG+ + L P++ + + + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 617 MKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
+ D + FGV + E G+ P ++ L S L+ E RLP P Q
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQ 242
Query: 676 EKLISIMEVAFSCLNESPESRPT 698
+ I V C PE RPT
Sbjct: 243 D----IYNVMVQCWAHKPEDRPT 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +G L L + + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVMEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 242
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
S+ ++ C + PE RPT + +
Sbjct: 243 -SLHDLMCQCWRKDPEERPTFEYL 265
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 29/262 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S +V E + +GSL L +T + L Q +++ +A ++Y+ +
Sbjct: 71 VVSE-EPIXIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 125
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + T G + APE A + T
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFT 183
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 184 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 232
Query: 679 ISIMEVAFSCLNESPESRPTMK 700
S+ ++ C + PE RPT +
Sbjct: 233 -SLHDLMCQCWRKEPEERPTFE 253
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 29/262 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +GSL L + + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFT 193
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 242
Query: 679 ISIMEVAFSCLNESPESRPTMK 700
S+ ++ C + PE RPT +
Sbjct: 243 -SLHDLMCQCWRKDPEERPTFE 263
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 29/264 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ VAIK + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
S ++V E + +G L L + + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
VH+D+ + N+L+ VADFG+A+ + E + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 621 EKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKL 678
K DV+SFG+L+ E KG+ P +N ++ LD++ R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREV-LDQVERGYRMPCPPECPE--- 242
Query: 679 ISIMEVAFSCLNESPESRPTMKVV 702
S+ ++ C + PE RPT + +
Sbjct: 243 -SLHDLMCQCWRKDPEERPTFEYL 265
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI--EVKALTEIRHRNIVK 500
IG G G V A E +G+ VA+KK D Q+ L+ EV + + H N+V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM------DLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y ++V E LE G+L I++ +E Q V V ALSYLH+
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIATVCLSVLRALSYLHNQG- 161
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
++H+DI S ++LL + ++DFG + E GT ++APE+ +
Sbjct: 162 --VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 621 EKCDVYSFGVLVLEAIKGKHP 641
+ D++S G++V+E I G+ P
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPP 240
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 37/268 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VAIK SP + FL E + + ++RH +V
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP---------EAFLQEAQVMKKLRHEKLV 243
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y S ++V E + +GSL L + + L Q +++ +A ++Y+
Sbjct: 244 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMN 301
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYT 616
+ VH+D+ + N+L+ VADFG+ + + E + +T G + APE A
Sbjct: 302 Y---VHRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALY 356
Query: 617 MKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI-LDPRLPPPSRSV 674
+ T K DV+SFG+L+ E KG+ P + +N ++ LD++ R+P P
Sbjct: 357 GRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVERGYRMPCPPECP 408
Query: 675 QEKLISIMEVAFSCLNESPESRPTMKVV 702
+ S+ ++ C + PE RPT + +
Sbjct: 409 E----SLHDLMCQCWRKDPEERPTFEYL 432
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 33/284 (11%)
Query: 429 DEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEV 487
D+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEA 58
Query: 488 KALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG 547
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQ 117
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT-- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ T AG
Sbjct: 118 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF 172
Query: 606 -YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI 662
+ APE LAY K + K DV++FGVL+ E A G P I S + E+
Sbjct: 173 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP---YPGIDPSQVY------EL 222
Query: 663 L--DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
L D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 223 LEKDYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 262
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 41/277 (14%)
Query: 444 IGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G G V+ L + +VA+K LP D A +FL E + L + H NIV+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA---KFLQEARILKQYSHPNIVRLI 178
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G C+ + ++V EL++ G L ++ A L + ++ A + YL C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYG-----------YVAP 611
+H+D++++N L+ + ++DFG+++ E G Y + AP
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR---------EEADGVYAASGGLRQVPVKWTAP 284
Query: 612 ELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670
E + + + DV+SFG+L+ E G P LS + RLP P
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG-------RLPCP 337
Query: 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707
+ + +ME C P RP+ + Q+++
Sbjct: 338 E-LCPDAVFRLME---QCWAYEPGQRPSFSTIYQELQ 370
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 129/268 (48%), Gaps = 25/268 (9%)
Query: 436 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+DF+ +G G G V++ + PSG V+A K H + + A + + + E++ L E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 65
Query: 495 HRNIVKFYG-FCSHARHSFLVYELLERGSLAAILS-SDTAAQELGWSQRMNVIKGVADAL 552
IV FYG F S S + E ++ GSL +L + +++ + VIKG L
Sbjct: 66 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 120
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
+YL I+H+D+ N+L++ E + DFG++ L E +N EF GT Y++PE
Sbjct: 121 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPE 176
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672
+ + D++S G+ ++E G++PR +++ LD I++ PPP
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFE--------LLDYIVNE--PPPKL 226
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMK 700
+ + CL ++P R +K
Sbjct: 227 PSAVFSLEFQDFVNKCLIKNPAERADLK 254
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 127/265 (47%), Gaps = 33/265 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G V R ++P + VAIK + Q +++FL E + + H NI+
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDFLSEASIMGQFDHPNII 93
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
G + + ++ E +E GSL A L + + Q + +++G+ + YL
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSD-- 149
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + APE
Sbjct: 150 -MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIA 207
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A++E RLPPP
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-------NQDVIKAIEEGY--RLPPP-- 256
Query: 673 SVQEKLISIMEVAFSCLNESPESRP 697
+ I++ ++ C + RP
Sbjct: 257 --MDCPIALHQLMLDCWQKERSDRP 279
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 33/284 (11%)
Query: 429 DEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEV 487
D+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEA 58
Query: 488 KALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG 547
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQ 117
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT-- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 118 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKF 172
Query: 606 -YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI 662
+ APE LAY K + K DV++FGVL+ E A G P I S + E+
Sbjct: 173 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP---YPGIDPSQVY------EL 222
Query: 663 L--DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
L D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 223 LEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 262
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 438 FDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI--EVKALTEIR 494
D+ IG G G V A E SG+ VA+K D Q+ L+ EV + + +
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMM------DLRKQQRRELLFNEVVIMRDYQ 100
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
H N+V+ Y +++ E L+ G+L I+S +E Q V + V AL+Y
Sbjct: 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE----QIATVCEAVLQALAY 156
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH ++H+DI S ++LL L+ ++DFG + + GT ++APE+
Sbjct: 157 LHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI 213
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ D++S G++V+E + G+ P
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 29/271 (10%)
Query: 444 IGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G G V+ L + +VA+K LP D A +FL E + L + H NIV+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA---KFLQEARILKQYSHPNIVRLI 178
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G C+ + ++V EL++ G L ++ A L + ++ A + YL C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG-----TYGYVAPELAYTM 617
+H+D++++N L+ + ++DFG++ + E+ +G + APE
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMS---REEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
+ + + DV+SFG+L+ E G P LS + RLP P +
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG-------RLPCPE-LCPD 342
Query: 677 KLISIMEVAFSCLNESPESRPTMKVVTQQVR 707
+ +ME C P RP+ + Q+++
Sbjct: 343 AVFRLME---QCWAYEPGQRPSFSTIYQELQ 370
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 33/284 (11%)
Query: 429 DEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEV 487
D+ D ++ +G G G VY + VA+K + + +EFL E
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEA 58
Query: 488 KALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG 547
+ EI+H N+V+ G C+ +++ E + G+L L + QE+ + +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQ 117
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT-- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ T AG
Sbjct: 118 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF 172
Query: 606 -YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI 662
+ APE LAY K + K DV++FGVL+ E A G P I S + E+
Sbjct: 173 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP---YPGIDPSQVY------EL 222
Query: 663 L--DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
L D R+ P EK+ +M +C +P RP+ + Q
Sbjct: 223 LEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 262
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
Query: 420 LNFEGKLVYDEIVRATNDFDAQYCIG---NGGHGSVYRAELPSGQVVAIKKFHSPLPCDQ 476
L F+ Y+ + R N D IG +G G VY+A+ V+A K ++
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 477 IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL 536
+ D +++E+ L H NIVK + + +++ E G++ A++ + L
Sbjct: 78 LED---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPL 132
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596
SQ V K DAL+YLH + I+H+D+ + N+L L+ + +ADFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 597 SNWTEFAGTYGYVAPELAYTMKITE-----KCDVYSFGVLVLEAIKGKHP 641
F GT ++APE+ + K DV+S G+ ++E + + P
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
Query: 420 LNFEGKLVYDEIVRATNDFDAQYCIG---NGGHGSVYRAELPSGQVVAIKKFHSPLPCDQ 476
L F+ Y+ + R N D IG +G G VY+A+ V+A K ++
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 477 IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL 536
+ D +++E+ L H NIVK + + +++ E G++ A++ + L
Sbjct: 78 LED---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPL 132
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596
SQ V K DAL+YLH + I+H+D+ + N+L L+ + +ADFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 597 SNWTEFAGTYGYVAPELAYTMKITE-----KCDVYSFGVLVLEAIKGKHP 641
F GT ++APE+ + K DV+S G+ ++E + + P
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
Query: 420 LNFEGKLVYDEIVRATNDFDAQYCIG---NGGHGSVYRAELPSGQVVAIKKFHSPLPCDQ 476
L F+ Y+ + R N D IG +G G VY+A+ V+A K ++
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 477 IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL 536
+ D +++E+ L H NIVK + + +++ E G++ A++ + L
Sbjct: 78 LED---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPL 132
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596
SQ V K DAL+YLH + I+H+D+ + N+L L+ + +ADFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 189
Query: 597 SNWTEFAGTYGYVAPELAYTMKITE-----KCDVYSFGVLVLEAIKGKHP 641
F GT ++APE+ + K DV+S G+ ++E + + P
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 43/263 (16%)
Query: 420 LNFEGKL----------VYDEIVRATNDFDAQY---------CIGNGGHGSVY--RAELP 458
L F+GKL Y+E RA F + IG+G G V R +P
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 459 SGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515
GQ VAIK + Q +++FL E + + H NI++ G + R + +V
Sbjct: 74 -GQRDVPVAIKALKAGYTERQ---RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVT 129
Query: 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL 575
E +E GSL L T + Q + +++GV + YL + VH+D++++N+L+
Sbjct: 130 EYMENGSLDTFLR--THDGQFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLV 184
Query: 576 DLEYEAHVADFGIAKFLKPE-SSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLV 632
D V+DFG+++ L+ + + +T G + APE + DV+SFGV++
Sbjct: 185 DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 633 LEAIK-GKHP------RDFLSLI 648
E + G+ P RD +S +
Sbjct: 245 WEVLAYGERPYWNMTNRDVISSV 267
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 443 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI--RHRNIVK 500
C+G G +G V+R G+ VA+K F S D+K + E + + RH NI+
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSS-------RDEKSWFRETELYNTVMLRHENILG 95
Query: 501 FYGFCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
F +RHS +L+ E GSL L T L + ++ +A L++LH
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLH 151
Query: 557 HDCF-----PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA-----GTY 606
+ F P I H+D+ SKN+L+ + +AD G+A + +S+N + GT
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTK 210
Query: 607 GYVAPE-LAYTMKIT-----EKCDVYSFGVLVLE--------AIKGKHPRDFLSLISSSS 652
Y+APE L T+++ ++ D+++FG+++ E I + F ++ +
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 270
Query: 653 LNTDIALDEILDPRLPP-PSRSVQE-KLISIMEVAFSCLNESPESRPT 698
D+ +D + P P+R + L S+ ++ C ++P +R T
Sbjct: 271 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 318
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 443 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI--RHRNIVK 500
C+G G +G V+R G+ VA+K F S D+K + E + + RH NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSS-------RDEKSWFRETELYNTVMLRHENILG 66
Query: 501 FYGFCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
F +RHS +L+ E GSL L T L + ++ +A L++LH
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLH 122
Query: 557 HDCF-----PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF-----AGTY 606
+ F P I H+D+ SKN+L+ + +AD G+A + +S+N + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTK 181
Query: 607 GYVAPE-LAYTMKIT-----EKCDVYSFGVLVLE--------AIKGKHPRDFLSLISSSS 652
Y+APE L T+++ ++ D+++FG+++ E I + F ++ +
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241
Query: 653 LNTDIALDEILDPRLPP-PSRSVQE-KLISIMEVAFSCLNESPESRPT 698
D+ +D + P P+R + L S+ ++ C ++P +R T
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 437 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLI-----EVKAL 490
DF +G G VYRAE + +G VAIK D+ A K ++ EVK
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI------DKKAMYKAGMVQRVQNEVKIH 65
Query: 491 TEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVAD 550
+++H +I++ Y + + + +LV E+ G + L + + ++ + + +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIIT 123
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK-PESSNWTEFAGTYGYV 609
+ YLH I+H+D++ NLLL +ADFG+A LK P ++T GT Y+
Sbjct: 124 GMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYI 179
Query: 610 APELAYTMKITEKCDVYSFGVLVLEAIKGKHPRD 643
+PE+A + DV+S G + + G+ P D
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 443 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI--RHRNIVK 500
C+G G +G V+R G+ VA+K F S D+K + E + + RH NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSS-------RDEKSWFRETELYNTVMLRHENILG 66
Query: 501 FYGFCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
F +RHS +L+ E GSL L T L + ++ +A L++LH
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLH 122
Query: 557 HDCF-----PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF-----AGTY 606
+ F P I H+D+ SKN+L+ + +AD G+A + +S+N + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTK 181
Query: 607 GYVAPE-LAYTMKIT-----EKCDVYSFGVLVLE--------AIKGKHPRDFLSLISSSS 652
Y+APE L T+++ ++ D+++FG+++ E I + F ++ +
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241
Query: 653 LNTDIALDEILDPRLPP-PSRSVQE-KLISIMEVAFSCLNESPESRPT 698
D+ +D + P P+R + L S+ ++ C ++P +R T
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 15/221 (6%)
Query: 428 YDEIVRATNDFDAQYCIGN-GGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIE 486
Y+ + R N D IG G G VY+A+ V+A K +++ D +++E
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVE 57
Query: 487 VKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ L H NIVK + + +++ E G++ A++ + L SQ V K
Sbjct: 58 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCK 115
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI-AKFLKPESSNWTEFAGT 605
DAL+YLH + I+H+D+ + N+L L+ + +ADFG+ AK + F GT
Sbjct: 116 QTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 606 YGYVAPELAYTMKITE-----KCDVYSFGVLVLEAIKGKHP 641
++APE+ + K DV+S G+ ++E + + P
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 41/278 (14%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G G G V+ AE +VA+K +K+F E + LT ++H +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEH 76
Query: 498 IVKFYGFCSHARHSFLVYELLERGSL----------AAILSSDTAAQELGWSQRMNVIKG 547
IVKFYG C +V+E ++ G L A +++ EL SQ +++ +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT-- 605
+A + YL F VH+D++++N L+ + DFG+++ + S+++ G
Sbjct: 137 IAAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMSRDVY--STDYYRVGGHTM 191
Query: 606 --YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEI 662
++ PE K T + DV+S GV++ E GK P L+ + ++ I
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP--------WYQLSNNEVIECI 243
Query: 663 LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
R+ R+ +++ +M C P R +K
Sbjct: 244 TQGRVLQRPRTCPQEVYELM---LGCWQREPHMRKNIK 278
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 43/263 (16%)
Query: 420 LNFEGKL----------VYDEIVRATNDFDAQY---------CIGNGGHGSVY--RAELP 458
L F+GKL Y+E RA F + IG+G G V R +P
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 459 SGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515
GQ VAIK + Q +++FL E + + H NI++ G + R + +V
Sbjct: 74 -GQRDVPVAIKALKAGYTERQ---RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVT 129
Query: 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL 575
E +E GSL L T + Q + +++GV + YL + VH+D++++N+L+
Sbjct: 130 EYMENGSLDTFLR--THDGQFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLV 184
Query: 576 DLEYEAHVADFGIAKFLK--PESSNWTEFAGT-YGYVAPELAYTMKITEKCDVYSFGVLV 632
D V+DFG+++ L+ P+++ T + APE + DV+SFGV++
Sbjct: 185 DSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 633 LEAIK-GKHP------RDFLSLI 648
E + G+ P RD +S +
Sbjct: 245 WEVLAYGERPYWNMTNRDVISSV 267
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 76
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + A+ + + + + + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA--HAERIDHIKLLQYTSQICKGMEYLG 134
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 190
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 250
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 251 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G GG +VY AE + VAIK P P ++ K F EV +++ H+NIV
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIP-PREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+LV E +E +L+ + S L +N + D + + H
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHD---MR 131
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA-GTYGYVAPELAYTMKITE 621
IVH+DI +N+L+D + DFGIAK L S T GT Y +PE A E
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 622 KCDVYSFGVLVLEAIKGKHP 641
D+YS G+++ E + G+ P
Sbjct: 192 CTDIYSIGIVLYEMLVGEPP 211
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
++ + Q +G G G V + +GQ A+K S Q D++ L EV+ L ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 107
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
H NI+K Y F + +LV E+ G L + S E+ ++ +I+ V ++
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 164
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAGTYGYVA 610
Y+H + IVH+D+ +NLLL+ + + + DFG++ + S + GT Y+A
Sbjct: 165 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIA 220
Query: 611 PELAYTMKITEKCDVYSFGVLV 632
PE+ + EKCDV+S GV++
Sbjct: 221 PEVLHGT-YDEKCDVWSTGVIL 241
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
++ + Q +G G G V + +GQ A+K S Q D++ L EV+ L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 83
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
H NI+K Y F + +LV E+ G L + S E+ ++ +I+ V ++
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 140
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
Y+H + IVH+D+ +NLLL+ + + + DFG++ + S + GT Y+A
Sbjct: 141 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIA 196
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + EKCDV+S GV++ + G P
Sbjct: 197 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
++ + Q +G G G V + +GQ A+K S Q D++ L EV+ L ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 89
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
H NI+K Y F + +LV E+ G L + S E+ ++ +I+ V ++
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 146
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
Y+H + IVH+D+ +NLLL+ + + + DFG++ + S + GT Y+A
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIA 202
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + EKCDV+S GV++ + G P
Sbjct: 203 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
++ + Q +G G G V + +GQ A+K S Q D++ L EV+ L ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 106
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
H NI+K Y F + +LV E+ G L + S E+ ++ +I+ V ++
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 163
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAGTYGYVA 610
Y+H + IVH+D+ +NLLL+ + + + DFG++ + S + GT Y+A
Sbjct: 164 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIA 219
Query: 611 PELAYTMKITEKCDVYSFGVLV 632
PE+ + EKCDV+S GV++
Sbjct: 220 PEVLHGT-YDEKCDVWSTGVIL 240
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 122/268 (45%), Gaps = 30/268 (11%)
Query: 444 IGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G+G G V+ E S + I K S +P +QI E++ L + H NI+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE------AEIEVLKSLDHPNII 83
Query: 500 KFYGFCSHARHSFLVYELLERGS-LAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
K + + ++V E E G L I+S+ + L ++K + +AL+Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 559 CFPPIVHQDISSKNLLLDLEYEAH----VADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
+VH+D+ +N+L + H + DFG+A+ K + + T AGT Y+APE+
Sbjct: 144 ---HVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEV- 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674
+ +T KCD++S GV++ + G P + +SL +P R +
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLP------FTGTSLEEVQQKATYKEPNYAVECRPL 251
Query: 675 QEKLISIMEVAFSCLNESPESRPTMKVV 702
+ + +++ L + PE RP+ V
Sbjct: 252 TPQAVDLLK---QMLTKDPERRPSAAQV 276
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G G V++ + + +VVAIK D+I D ++ E+ L++ + K+Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTKYY 91
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G +++ E L GS +L L +Q +++ + L YLH +
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---K 144
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
+H+DI + N+LL E +ADFG+A L F GT ++APE+ K
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 623 CDVYSFGVLVLEAIKGK------HPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
D++S G+ +E +G+ HP L LI ++ PP
Sbjct: 205 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---------------PPTLEGNYS 249
Query: 677 KLISIMEVAFSCLNESPESRPTMK 700
K + E +CLN+ P RPT K
Sbjct: 250 K--PLKEFVEACLNKEPSFRPTAK 271
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + V + +P P A F EV L + RH NI+ F G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA----FKNEVGVLRKTRHVNILLFMG 87
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L + E+ + +++ + A + YLH I
Sbjct: 88 YSTKPQLA-IVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---I 141
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFAGTYGYVAPELAYTM 617
+H+D+ S N+ L + + DFG+A E S W+ + +G+ ++APE+
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 618 K---ITEKCDVYSFGVLVLEAIKGKHP------RD-FLSLISSSSLNTDIALDEILDPRL 667
+ + DVY+FG+++ E + G+ P RD + ++ SL+ D++ R
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS-----KVRS 252
Query: 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P R + + CL + + RP+ + ++
Sbjct: 253 NCPKR--------MKRLMAECLKKKRDERPSFPRILAEI 283
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E ++++ H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKLNHQN 109
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 170 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 224
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 277
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 278 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 43/279 (15%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + V + +P P A F EV L + RH NI+ F G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA----FKNEVGVLRKTRHVNILLFMG 87
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ S A +V + E SL L + E+ + +++ + A + YLH I
Sbjct: 88 Y-STAPQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---I 141
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFAGTYGYVAPELAYTM 617
+H+D+ S N+ L + + DFG+A E S W+ + +G+ ++APE+
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 618 K---ITEKCDVYSFGVLVLEAIKGKHP------RD-FLSLISSSSLNTDIALDEILDPRL 667
+ + DVY+FG+++ E + G+ P RD + ++ SL+ D++ R
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS-----KVRS 252
Query: 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P R + + CL + + RP+ + ++
Sbjct: 253 NCPKR--------MKRLMAECLKKKRDERPSFPRILAEI 283
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPCDQIADQKEFLIEVKALTEI 493
+DF+ +G G G+VY A E S +VA+K F S + + + Q IE++A +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQA--HL 80
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
H NI++ Y + R +L+ E RG L L E + +++ +ADAL
Sbjct: 81 HHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE---QRTATIMEELADALM 137
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
Y H ++H+DI +NLLL L+ E +ADFG + + S GT Y+ PE+
Sbjct: 138 YCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEM 192
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EK D++ GVL E + G P
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E ++++ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKLNHQN 95
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 210
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 263
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 264 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 73
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 131
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + + APE
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAPE 187
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 248 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 76
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK--HKERIDHIKLLQYTSQICKGMEYLG 134
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 190
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 250
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 251 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 109
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 110 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 170 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 224
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 277
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 278 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 86
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 87 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 147 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 201
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 254
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 255 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 94
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 155 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 209
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 262
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 263 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 91
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 149
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 150 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 205
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 265
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 266 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 304
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 94
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 95 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 155 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 209
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 262
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 263 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 91
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 149
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 150 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 205
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 265
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 266 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 304
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 95
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 210
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 263
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 264 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 101
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 102 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 161
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 162 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 216
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 269
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 270 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 111
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 112 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 172 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 226
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 279
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 280 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 139/293 (47%), Gaps = 43/293 (14%)
Query: 445 GNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGF 504
G G V++A+L + + VA+K F P+ D+ + Q E+ EV +L ++H NI++F G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIF--PIQ-DKQSWQNEY--EVYSLPGMKHENILQFIG- 85
Query: 505 CSHARHS------FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
+ R + +L+ E+GSL+ L ++ + W++ ++ + +A L+YLH D
Sbjct: 86 -AEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS----WNELCHIAETMARGLAYLHED 140
Query: 559 C-------FPPIVHQDISSKNLLLDLEYEAHVADFGIA-KFLKPESSNWTEF-AGTYGYV 609
P I H+DI SKN+LL A +ADFG+A KF +S+ T GT Y+
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 610 APE-----LAYTMKITEKCDVYSFGVLVLE----AIKGKHPRDFLSLISSSSLNTDIALD 660
APE + + + D+Y+ G+++ E P D L + +L+
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLE 260
Query: 661 E----ILDPRLPPPSRSVQEK---LISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ ++ + P R +K + + E C + E+R + V +++
Sbjct: 261 DMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERI 313
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G G V++ + + +VVAIK D+I D ++ E+ L++ + K+Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTKYY 71
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G +++ E L GS +L L +Q +++ + L YLH +
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---K 124
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
+H+DI + N+LL E +ADFG+A L F GT ++APE+ K
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 623 CDVYSFGVLVLEAIKGK------HPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
D++S G+ +E +G+ HP L LI ++ PP
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---------------PPTLEGNYS 229
Query: 677 KLISIMEVAFSCLNESPESRPTMK 700
K + E +CLN+ P RPT K
Sbjct: 230 K--PLKEFVEACLNKEPSFRPTAK 251
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G G V++ + + +VVAIK D+I D ++ E+ L++ + K+Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTKYY 71
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G +++ E L GS +L L +Q +++ + L YLH +
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---K 124
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
+H+DI + N+LL E +ADFG+A L F GT ++APE+ K
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 623 CDVYSFGVLVLEAIKGK------HPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
D++S G+ +E +G+ HP L LI ++ PP
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---------------PPTLEGNYS 229
Query: 677 KLISIMEVAFSCLNESPESRPTMK 700
K + E +CLN+ P RPT K
Sbjct: 230 K--PLKEFVEACLNKEPSFRPTAK 251
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 22/258 (8%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G G VY+ + + +VVAIK D+I D ++ E+ L++ I +++
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYITRYF 83
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G + +++ E L GS +L + + +++ + L YLH +
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEE----TYIATILREILKGLDYLHSER--- 136
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
+H+DI + N+LL + + +ADFG+A L F GT ++APE+ K
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 623 CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIM 682
D++S G+ +E KG+ P +S L+ L L P+ PP+ Q
Sbjct: 197 ADIWSLGITAIELAKGEPP--------NSDLHPMRVL--FLIPKNSPPTLEGQHSK-PFK 245
Query: 683 EVAFSCLNESPESRPTMK 700
E +CLN+ P RPT K
Sbjct: 246 EFVEACLNKDPRFRPTAK 263
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 73
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 131
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 187
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 248 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G G V++ + + +VVAIK D+I D ++ E+ L++ + K+Y
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTKYY 86
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G +++ E L GS +L L +Q +++ + L YLH +
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---K 139
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
+H+DI + N+LL E +ADFG+A L F GT ++APE+ K
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 623 CDVYSFGVLVLEAIKGK------HPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
D++S G+ +E +G+ HP L LI ++ PP
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---------------PPTLEGNYS 244
Query: 677 KLISIMEVAFSCLNESPESRPTMK 700
K + E +CLN+ P RPT K
Sbjct: 245 K--PLKEFVEACLNKEPSFRPTAK 266
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G+G G VY+A+ +A K +++ D +++E++ L H IVK G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEILATCDHPYIVKLLG 75
Query: 504 FCSHARHSFLVYELLERGSLAAI-LSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
H +++ E G++ AI L D E Q V + + +AL++LH
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE---PQIQVVCRQMLEALNFLHSK---R 129
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGI-AKFLKPESSNWTEFAGTYGYVAPELAY--TMKI 619
I+H+D+ + N+L+ LE + +ADFG+ AK LK F GT ++APE+ TMK
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKD 188
Query: 620 TE---KCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
T K D++S G+ ++E + + P L + + + + + P L PS+ E
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHEL-----NPMRVLLKIAKSDPPTLLTPSKWSVE 243
Query: 677 KLISIMEVAFSCLNESPESRPT 698
+++A L+++PE+RP+
Sbjct: 244 -FRDFLKIA---LDKNPETRPS 261
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 73
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 131
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 187
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 248 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 95
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY--RASYYRKGGCAMLPV 210
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 263
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 264 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 135
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + + + G
Sbjct: 196 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLPV 250
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 303
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 304 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 112
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 113 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + + + G
Sbjct: 173 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLPV 227
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 280
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 281 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 76
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 134
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 190
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 250
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 251 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 79
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 137
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 138 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 193
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 194 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 253
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 254 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 292
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 80
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 138
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 139 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 194
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 195 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 254
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 255 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 293
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 77
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 135
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 136 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 191
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 192 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 251
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 252 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 290
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 104
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 162
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 163 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 218
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 279 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 317
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 72
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 130
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 131 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 186
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 187 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 246
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 247 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 285
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G+G G VY+A+ +A K +++ D +++E++ L H IVK G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEILATCDHPYIVKLLG 83
Query: 504 FCSHARHSFLVYELLERGSLAAI-LSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
H +++ E G++ AI L D E Q V + + +AL++LH
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE---PQIQVVCRQMLEALNFLHSK---R 137
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGI-AKFLKPESSNWTEFAGTYGYVAPELAY--TMKI 619
I+H+D+ + N+L+ LE + +ADFG+ AK LK F GT ++APE+ TMK
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKD 196
Query: 620 TE---KCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676
T K D++S G+ ++E + + P L + + + + + P L PS+ E
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHEL-----NPMRVLLKIAKSDPPTLLTPSKWSVE 251
Query: 677 KLISIMEVAFSCLNESPESRPT 698
+++A L+++PE+RP+
Sbjct: 252 -FRDFLKIA---LDKNPETRPS 269
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 78
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 136
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 137 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 192
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 193 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 252
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 253 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 291
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 29/282 (10%)
Query: 429 DEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEV 487
D+ D ++ +G G +G VY + VA+K + + +EFL E
Sbjct: 25 DKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEA 79
Query: 488 KALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG 547
+ EI+H N+V+ G C+ ++V E + G+L L + +E+ + +
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQ 138
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT-- 605
++ A+ YL F +H+D++++N L+ + VADFG+++ + ++ +T AG
Sbjct: 139 ISSAMEYLEKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKF 193
Query: 606 -YGYVAPE-LAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDEI 662
+ APE LAY + K DV++FGVL+ E A G P + L L E
Sbjct: 194 PIKWTAPESLAYN-TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRME- 251
Query: 663 LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
P PP + E+ +C SP RP+ Q
Sbjct: 252 -QPEGCPP---------KVYELMRACWKWSPADRPSFAETHQ 283
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 71
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 129
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H+D++++N+L++ E + DFG+ K L P+ + + APE
Sbjct: 130 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 185
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 245
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 246 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 284
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 33/268 (12%)
Query: 441 QYCIGNGGHGSVY--RAELPSGQV--VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR 496
+ IG G G V R +LP + VAIK Q +++FL E + + H
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHP 83
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
NI+ G + ++ +V E +E GSL L + + Q + +++G++ + YL
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG--QFTVIQLVGMLRGISAGMKYLS 141
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPE 612
+ VH+D++++N+L++ V+DFG+++ L+ PE++ +T G + APE
Sbjct: 142 DMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTAPE 197
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPP 669
K T DV+S+G+++ E + G+ P ++ N D+ A++E RLP
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT-------NQDVIKAVEE--GYRLPS 248
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRP 697
P + ++ ++ C + SRP
Sbjct: 249 P----MDCPAALYQLMLDCWQKERNSRP 272
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 49/287 (17%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G+G G VY ++ PS VA+K P C + D+ +FL+E +++ H+N
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSE-QDELDFLMEALIISKFNHQN 121
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALS 553
IV+ G + F++ EL+ G L + L + L ++V + +A
Sbjct: 122 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT----Y 606
YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 182 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 236
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLNTDIAL 659
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG------- 289
Query: 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 290 ------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 25/270 (9%)
Query: 436 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+DF+ +G G G V++ + PSG V+A K H + + A + + + E++ L E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 81
Query: 495 HRNIVKFYG-FCSHARHSFLVYELLERGSLAAILS-SDTAAQELGWSQRMNVIKGVADAL 552
IV FYG F S S + E ++ GSL +L + +++ + VIKG L
Sbjct: 82 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 136
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
+YL I+H+D+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 137 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 192
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL--PPP 670
+ + D++S G+ ++E G++P I S S +A+ E+LD + PPP
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP------IGSGS--GSMAIFELLDYIVNEPPP 244
Query: 671 SRSVQEKLISIMEVAFSCLNESPESRPTMK 700
+ + CL ++P R +K
Sbjct: 245 KLPSGVFSLEFQDFVNKCLIKNPAERADLK 274
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 34/283 (12%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G+VVA+KK ++F E++ L ++H NI
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----EHLRDFEREIEILKSLQHDNI 74
Query: 499 VKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
VK+ G C A R+ L+ E L GSL L + + + + + + YL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLG 132
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPE 612
+ +H++++++N+L++ E + DFG+ K L P+ + + + APE
Sbjct: 133 TKRY---IHRNLATRNILVENENRVKIGDFGLTKVL-PQDKEYYKVKEPGESPIFWYAPE 188
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKH-PRDFLSLISSSSLNTDIA--LDEIL-- 663
K + DV+SFGV++ E K K P +F+ +I + I L E+L
Sbjct: 189 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 248
Query: 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ RLP P E I + C N + RP+ + + +V
Sbjct: 249 NGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRV 287
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 35/275 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + V + +P P A F EV L + RH NI+ F G
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA----FKNEVGVLRKTRHVNILLFMG 75
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L + E+ + +++ + A + YLH I
Sbjct: 76 YSTKPQLA-IVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---I 129
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIA--KFLKPESSNWTEFAGTYGYVAPELAYTMK--- 618
+H+D+ S N+ L + + DFG+A K S + + +G+ ++APE+
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 619 ITEKCDVYSFGVLVLEAIKGKHP------RD-FLSLISSSSLNTDIALDEILDPRLPPPS 671
+ + DVY+FG+++ E + G+ P RD + ++ SL+ D++ R P
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS-----KVRSNCPK 244
Query: 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R + + CL + + RP+ + ++
Sbjct: 245 R--------MKRLMAECLKKKRDERPSFPRILAEI 271
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 9/196 (4%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG G +G VY+A+ G+ A+KK + I + E+ L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ LV+E L++ L +L D L + + + + ++Y H +
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAYTMKITEK 622
+H+D+ +NLL++ E E +ADFG+A+ +T T Y AP+ L + K +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 623 CDVYSFGVLVLEAIKG 638
D++S G + E + G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 9/196 (4%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG G +G VY+A+ G+ A+KK + I + E+ L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ LV+E L++ L +L D L + + + + ++Y H +
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAYTMKITEK 622
+H+D+ +NLL++ E E +ADFG+A+ +T T Y AP+ L + K +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 623 CDVYSFGVLVLEAIKG 638
D++S G + E + G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 29/268 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKF-HSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG+G G+VY A ++ + +VVAIKK +S ++ ++ + EV+ L ++RH N +++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE--KWQDIIKEVRFLQKLRHPNTIQY 119
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH-HDCF 560
G ++LV E GS + +L + + L + V G L+YLH H+
Sbjct: 120 RGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHSHN-- 174
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM--- 617
++H+D+ + N+LL + DFG A + P + F GT ++APE+ M
Sbjct: 175 --MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEG 228
Query: 618 KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
+ K DV+S G+ +E + K P L +++ S IA +E P L S E
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNE--SPAL--QSGHWSEY 281
Query: 678 LISIMEVAFSCLNESPESRPTMKVVTQQ 705
+ ++ SCL + P+ RPT +V+ +
Sbjct: 282 FRNFVD---SCLQKIPQDRPTSEVLLKH 306
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 27/263 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ A VA+K P + FL E + ++H +VK +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA--FLAEANVMKTLQHDKLVKLHA 77
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ +++ E + +GSL L SD +++ + ++ +A+ ++++ +
Sbjct: 78 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY--- 132
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
+H+D+ + N+L+ +ADFG+A+ + E + +T G + APE T
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 621 EKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679
K DV+SFG+L++E + G+ P +S N ++ R+P P + E+L
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGYRMPRPE-NCPEELY 242
Query: 680 SIMEVAFSCLNESPESRPTMKVV 702
+IM C PE RPT + +
Sbjct: 243 NIM---MRCWKNRPEERPTFEYI 262
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG G G V + G VA+K + A + FL E +T++RH N+V+ G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 504 FCSHARHS-FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+ ++V E + +GSL L S LG + V +A+ YL + F
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-- 123
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKIT 620
VH+D++++N+L+ + A V+DFG+ K E+S+ T+ G + APE K +
Sbjct: 124 -VHRDLAARNVLVSEDNVAKVSDFGLTK----EASS-TQDTGKLPVKWTAPEALREKKFS 177
Query: 621 EKCDVYSFGVLVLE 634
K DV+SFG+L+ E
Sbjct: 178 TKSDVWSFGILLWE 191
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 9/196 (4%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG G +G VY+A+ G+ A+KK + I + E+ L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ LV+E L++ L +L D L + + + + ++Y H +
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAYTMKITEK 622
+H+D+ +NLL++ E E +ADFG+A+ +T T Y AP+ L + K +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTT 181
Query: 623 CDVYSFGVLVLEAIKG 638
D++S G + E + G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 27/263 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ A VA+K P + FL E + ++H +VK +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA--FLAEANVMKTLQHDKLVKLHA 250
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ +++ E + +GSL L SD +++ + ++ +A+ ++++ +
Sbjct: 251 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY--- 305
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
+H+D+ + N+L+ +ADFG+A+ + E + +T G + APE T
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 621 EKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679
K DV+SFG+L++E + G+ P +S N ++ R+P P + E+L
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGYRMPRPE-NCPEELY 415
Query: 680 SIMEVAFSCLNESPESRPTMKVV 702
+IM C PE RPT + +
Sbjct: 416 NIM---MRCWKNRPEERPTFEYI 435
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG G G V + G VA+K + A + FL E +T++RH N+V+ G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 504 FCSHARHS-FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+ ++V E + +GSL L S LG + V +A+ YL + F
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-- 138
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKIT 620
VH+D++++N+L+ + A V+DFG+ K E+S+ T+ G + APE K +
Sbjct: 139 -VHRDLAARNVLVSEDNVAKVSDFGLTK----EASS-TQDTGKLPVKWTAPEALREKKFS 192
Query: 621 EKCDVYSFGVLVLE 634
K DV+SFG+L+ E
Sbjct: 193 TKSDVWSFGILLWE 206
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
++ + Q +G G G V + +GQ A+K S Q D++ L EV+ L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 83
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
H NI K Y F + +LV E+ G L + S E+ ++ +I+ V ++
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 140
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAGTYGYVA 610
Y H + IVH+D+ +NLLL+ + + + DFG++ + S + GT Y+A
Sbjct: 141 YXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKDKIGTAYYIA 196
Query: 611 PELAYTMKITEKCDVYSFGVLV 632
PE+ + EKCDV+S GV++
Sbjct: 197 PEVLHGT-YDEKCDVWSTGVIL 217
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 33/271 (12%)
Query: 444 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G V R +LP + VAIK Q +++FL E + + H N+V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ---RRDFLCEASIMGQFDHPNVV 107
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
G + + +V E +E G+L A L + Q + +++G+A + YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG--QFTVIQLVGMLRGIAAGMRYLADMG 165
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFAGT--YGYVAPELAY 615
+ VH+D++++N+L++ V+DFG+++ ++ PE+ +T G + APE
Sbjct: 166 Y---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV-YTTTGGKIPVRWTAPEAIQ 221
Query: 616 TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI--ALDEILDPRLPPPSR 672
K T DV+S+G+++ E + G+ P +S N D+ A++E RLP P
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-------NQDVIKAIEEGY--RLPAP-- 270
Query: 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVT 703
+ + ++ C + RP + +
Sbjct: 271 --MDCPAGLHQLMLDCWQKERAERPKFEQIV 299
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G +G VY+A+ G++VA+K+ L + + E+ L E+ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIR--LDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
R LV+E +E+ + + T Q+ SQ + + +++ H I
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQD---SQIKIYLYQLLRGVAHCHQH---RI 140
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAYTMKITEK 622
+H+D+ +NLL++ + +ADFG+A+ ++T T Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 623 CDVYSFGVLVLEAIKGK 639
D++S G + E I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G +G VY+A+ G++VA+K+ L + + E+ L E+ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIR--LDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
R LV+E +E+ + + T Q+ SQ + + +++ H I
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQD---SQIKIYLYQLLRGVAHCHQH---RI 140
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAYTMKITEK 622
+H+D+ +NLL++ + +ADFG+A+ ++T T Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 623 CDVYSFGVLVLEAIKGK 639
D++S G + E I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 29/268 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKF-HSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG+G G+VY A ++ + +VVAIKK +S ++ ++ + EV+ L ++RH N +++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE--KWQDIIKEVRFLQKLRHPNTIQY 80
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH-HDCF 560
G ++LV E GS + +L + + L + V G L+YLH H+
Sbjct: 81 RGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHSHN-- 135
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM--- 617
++H+D+ + N+LL + DFG A + P + F GT ++APE+ M
Sbjct: 136 --MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEG 189
Query: 618 KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
+ K DV+S G+ +E + K P L +++ S IA +E P L S E
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNE--SPAL--QSGHWSEY 242
Query: 678 LISIMEVAFSCLNESPESRPTMKVVTQQ 705
+ ++ SCL + P+ RPT +V+ +
Sbjct: 243 FRNFVD---SCLQKIPQDRPTSEVLLKH 267
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG G G V + G VA+K + A + FL E +T++RH N+V+ G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 504 FCSHARHS-FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+ ++V E + +GSL L S LG + V +A+ YL + F
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-- 310
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKIT 620
VH+D++++N+L+ + A V+DFG+ K E+S+ T+ G + APE K +
Sbjct: 311 -VHRDLAARNVLVSEDNVAKVSDFGLTK----EASS-TQDTGKLPVKWTAPEALREKKFS 364
Query: 621 EKCDVYSFGVLVLE 634
K DV+SFG+L+ E
Sbjct: 365 TKSDVWSFGILLWE 378
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 478 ADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
A + E L E + ++ + IV+ G C A LV E+ E G L L + ++
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 469
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ ++ V+ + YL F VH+D++++N+LL ++ A ++DFG++K L+ + +
Sbjct: 470 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525
Query: 598 NWTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
+ A T+G + APE K + K DV+SFGVL+ EA G+ P
Sbjct: 526 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 478 ADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
A + E L E + ++ + IV+ G C A LV E+ E G L L + ++
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 468
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ ++ V+ + YL F VH+D++++N+LL ++ A ++DFG++K L+ + +
Sbjct: 469 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524
Query: 598 NWTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
+ A T+G + APE K + K DV+SFGVL+ EA G+ P
Sbjct: 525 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 26/259 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ + VA+K Q FL E + ++H +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-----FLEEANLMKTLQHDKLVRLYA 75
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ +++ E + +GSL L SD + L + ++ +A+ ++Y+ +
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY--- 131
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
+H+D+ + N+L+ +ADFG+A+ + E + +T G + APE T
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 621 EKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679
K DV+SFG+L+ E + GK P N D+ R+ P + ++L
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIP-------YPGRTNADVMTALSQGYRM-PRVENCPDELY 241
Query: 680 SIMEVAFSCLNESPESRPT 698
IM++ C E E RPT
Sbjct: 242 DIMKM---CWKEKAEERPT 257
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 478 ADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
A + E L E + ++ + IV+ G C A LV E+ E G L L + ++
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 110
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ ++ V+ + YL F VH+D++++N+LL ++ A ++DFG++K L+ + +
Sbjct: 111 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
Query: 598 NWTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
+ A T+G + APE K + K DV+SFGVL+ EA G+ P
Sbjct: 167 XYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 59/292 (20%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIA-----------DQKEFLIEVKALTE 492
+G+G G VY GQV + SPL Q+A D+ +FL+E +++
Sbjct: 53 LGHGAFGEVYE-----GQVSGMPNDPSPL---QVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGV 548
H+NIV+ G + F++ EL+ G L + L + L ++V + +
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVA---DFGIAKFLKPESSNWTEFAGT 605
A YL + F +H+DI+++N LL VA DFG+A+ + +++ G
Sbjct: 165 ACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGC 219
Query: 606 ----YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-------GKHPRDFLSLISSSSLN 654
++ PE T K D +SFGVL+ E K ++ L ++S
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG-- 277
Query: 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PP + + C PE RP ++ +++
Sbjct: 278 -----------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 478 ADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
A + E L E + ++ + IV+ G C A LV E+ E G L L + ++
Sbjct: 48 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 104
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ ++ V+ + YL F VH+D++++N+LL ++ A ++DFG++K L+ + +
Sbjct: 105 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 160
Query: 598 NWTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
+ A T+G + APE K + K DV+SFGVL+ EA G+ P
Sbjct: 161 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + VA+K + P Q + F EV L + RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L E+ + +++ + A + YLH I
Sbjct: 72 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFAGTYGYVAPELAYTM 617
+H+D+ S N+ L + + DFG+A E S W+ + +G+ ++APE+ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV---I 178
Query: 618 KITEK------CDVYSFGVLVLEAIKGKHP 641
++ +K DVY+FG+++ E + G+ P
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 478 ADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
A + E L E + ++ + IV+ G C A LV E+ E G L L + ++
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 110
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ ++ V+ + YL F VH+D++++N+LL ++ A ++DFG++K L+ + +
Sbjct: 111 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
Query: 598 NWTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
+ A T+G + APE K + K DV+SFGVL+ EA G+ P
Sbjct: 167 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 478 ADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
A + E L E + ++ + IV+ G C A LV E+ E G L L + ++
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 116
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ ++ V+ + YL F VH+D++++N+LL ++ A ++DFG++K L+ + +
Sbjct: 117 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172
Query: 598 NWTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
+ A T+G + APE K + K DV+SFGVL+ EA G+ P
Sbjct: 173 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + VA+K + P Q + F EV L + RH NI+ F G
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L E+ + +++ + A + YLH I
Sbjct: 92 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 145
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFAGTYGYVAPELAYTM 617
+H+D+ S N+ L + + DFG+A E S W+ + +G+ ++APE+ +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---I 198
Query: 618 KITEK------CDVYSFGVLVLEAIKGKHP 641
++ +K DVY+FG+++ E + G+ P
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG G G V + G VA+K + A + FL E +T++RH N+V+ G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 504 FCSHARHS-FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+ ++V E + +GSL L S LG + V +A+ YL + F
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-- 129
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKIT 620
VH+D++++N+L+ + A V+DFG+ K E+S+ T+ G + APE +
Sbjct: 130 -VHRDLAARNVLVSEDNVAKVSDFGLTK----EASS-TQDTGKLPVKWTAPEALREAAFS 183
Query: 621 EKCDVYSFGVLVLE 634
K DV+SFG+L+ E
Sbjct: 184 TKSDVWSFGILLWE 197
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + VA+K + P Q + F EV L + RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L E+ + +++ + A + YLH I
Sbjct: 100 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 153
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFAGTYGYVAPELAYTM 617
+H+D+ S N+ L + + DFG+A E S W+ + +G+ ++APE+ +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---I 206
Query: 618 KITEK------CDVYSFGVLVLEAIKGKHP 641
++ +K DVY+FG+++ E + G+ P
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 478 ADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
A + E L E + ++ + IV+ G C A LV E+ E G L L + ++
Sbjct: 68 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 124
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ ++ V+ + YL F VH+D++++N+LL ++ A ++DFG++K L+ + +
Sbjct: 125 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 180
Query: 598 NWTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
+ A T+G + APE K + K DV+SFGVL+ EA G+ P
Sbjct: 181 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 478 ADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
A + E L E + ++ + IV+ G C A LV E+ E G L L + ++
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 126
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ ++ V+ + YL F VH+D++++N+LL ++ A ++DFG++K L+ + +
Sbjct: 127 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 598 NWTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
+ A T+G + APE K + K DV+SFGVL+ EA G+ P
Sbjct: 183 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 478 ADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
A + E L E + ++ + IV+ G C A LV E+ E G L L + ++
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 126
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ ++ V+ + YL F VH+D++++N+LL ++ A ++DFG++K L+ + +
Sbjct: 127 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 598 NWTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
+ A T+G + APE K + K DV+SFGVL+ EA G+ P
Sbjct: 183 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 478 ADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
A + E L E + ++ + IV+ G C A LV E+ E G L L + ++
Sbjct: 50 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 106
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ ++ V+ + YL F VH+D++++N+LL ++ A ++DFG++K L+ + +
Sbjct: 107 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 162
Query: 598 NWTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641
+ A T+G + APE K + K DV+SFGVL+ EA G+ P
Sbjct: 163 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G +G V + +G++VAIKKF D +K + E+K L ++RH N+V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLES--DDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 503 GFCSHARHSFLVYELLERGSLAAI-LSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
C + +LV+E ++ L + L + ++ +I G+ S+
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH------- 143
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY-TMKIT 620
I+H+DI +N+L+ + DFG A+ L + + T Y APEL +K
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 621 EKCDVYSFGVLVLEAIKGK 639
+ DV++ G LV E G+
Sbjct: 204 KAVDVWAIGCLVTEMFMGE 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 124/305 (40%), Gaps = 59/305 (19%)
Query: 432 VRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKF-HSPLPCDQIADQKEFLIEVKA 489
+R +DF+ +G G G V +A + AIKK H+ I L EV
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI------LSEVML 55
Query: 490 LTEIRHRNIVKFYGFCSHARHS-------------FLVYELLERGSLAAILSSDTAAQEL 536
L + H+ +V++Y R+ F+ E E G+L ++ S+ Q+
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK------ 590
R+ + + +ALSY+H I+H+D+ N+ +D + DFG+AK
Sbjct: 116 DEYWRL--FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 591 -FLKPE-------SSNWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAI----K 637
LK + S N T GT YVA E L T EK D+YS G++ E I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
Query: 638 GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRP 697
G + L + S S+ P V++K+I ++ ++ P RP
Sbjct: 231 GMERVNILKKLRSVSIE--------FPPDFDDNKMKVEKKIIRLL------IDHDPNKRP 276
Query: 698 TMKVV 702
+ +
Sbjct: 277 GARTL 281
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 11/231 (4%)
Query: 427 VYDEIVRATND-FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLI 485
V+DE D F+ IG G G V + + + K+ + C + + +
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
E++ + + H +V + F+V +LL G L L + +E + ++ +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE--TVKLFIC 122
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT 605
+ V AL YL + I+H+D+ N+LLD H+ DF IA L P + T AGT
Sbjct: 123 ELVM-ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGT 177
Query: 606 YGYVAPELAYTMK---ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL 653
Y+APE+ + K + D +S GV E ++G+ P S SS +
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI 228
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 31/260 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ A VA+K P + FL E + ++H +VK +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA--FLAEANVMKTLQHDKLVKLHA 244
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ +++ E + +GSL L SD +++ + ++ +A+ ++++ +
Sbjct: 245 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY--- 299
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKC 623
+H+D+ + N+L+ +ADFG+A+ WT APE T K
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGSFTIKS 350
Query: 624 DVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIM 682
DV+SFG+L++E + G+ P +S N ++ R+P P + E+L +IM
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGYRMPRPE-NCPEELYNIM 402
Query: 683 EVAFSCLNESPESRPTMKVV 702
C PE RPT + +
Sbjct: 403 ---MRCWKNRPEERPTFEYI 419
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 25/273 (9%)
Query: 436 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+DF+ +G G G V++ + PSG V+A K H + + A + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-SDTAAQELGWSQRMNVIKGVADALS 553
IV FYG + E ++ GSL +L + +++ + VIKG L+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
YL I+H+D+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 119 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD----IALDEILDPRL-- 667
+ + D++S G+ ++E G++P I D +A+ E+LD +
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP------IPPPDAKEDSRPPMAIFELLDYIVNE 228
Query: 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
PPP + + CL ++P R +K
Sbjct: 229 PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 261
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 121/286 (42%), Gaps = 52/286 (18%)
Query: 438 FDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLI-EVKALTEI-R 494
F+ +GNG +G VY+ + +GQ+ AIK D D++E + E+ L +
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVM------DVTGDEEEEIKQEINMLKKYSH 79
Query: 495 HRNIVKFYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
HRNI +YG +LV E GS+ ++ +T L + + +
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIK-NTKGNTLKEEWIAYICREI 138
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGY 608
LS+LH ++H+DI +N+LL E + DFG++ L F GT +
Sbjct: 139 LRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYW 195
Query: 609 VAPELAYTMKITE-----KCDVYSFGVLVLEAIKGK------HPRDFLSLISSSSLNTDI 657
+APE+ + + K D++S G+ +E +G HP L LI
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI--------- 246
Query: 658 ALDEILDPRLPPP---SRSVQEKLISIMEVAFSCLNESPESRPTMK 700
PR P P S+ +K S +E SCL ++ RP +
Sbjct: 247 -------PRNPAPRLKSKKWSKKFQSFIE---SCLVKNHSQRPATE 282
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 29/256 (11%)
Query: 459 SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL--VYE 516
+G++VA+K + + K+ E+ L + H +I+K+ G C A + L V E
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115
Query: 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576
+ GSL L + +G +Q + + + + ++YLH + +H+D++++N+LLD
Sbjct: 116 YVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLD 168
Query: 577 LEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPELAYTMKITEKCDVYSFGVLV 632
+ + DFG+AK + PE + APE K DV+SFGV +
Sbjct: 169 NDRLVKIGDFGLAKAV-PEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 227
Query: 633 LEAI-----KGKHPRDFLSLIS-SSSLNTDIALDEILD--PRLPPPSRSVQEKLISIMEV 684
E + P FL LI + T + L E+L+ RLP P + E + +
Sbjct: 228 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAE----VYHL 283
Query: 685 AFSCLNESPESRPTMK 700
+C RPT +
Sbjct: 284 MKNCWETEASFRPTFE 299
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 26/259 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+ + VA+K Q FL E + ++H +V+ Y
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-----FLEEANLMKTLQHDKLVRLYA 74
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ +++ E + +GSL L SD + L + ++ +A+ ++Y+ +
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY--- 130
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKIT 620
+H+D+ + N+L+ +ADFG+A+ + E + +T G + APE T
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 621 EKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679
K +V+SFG+L+ E + GK P N D+ + + P + ++L
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIP-------YPGRTNADV-MSALSQGYRMPRMENCPDELY 240
Query: 680 SIMEVAFSCLNESPESRPT 698
IM++ C E E RPT
Sbjct: 241 DIMKM---CWKEKAEERPT 256
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSG----QVVAIKKFHSPLPCDQIADQKEFLIEVKALT 491
+ F+ +G G G V+ + SG Q+ A+K ++ D+ +E L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA--TLKVRDRVRTKMERDILV 81
Query: 492 EIRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVAD 550
E+ H IVK Y F + + +L+ + L G L LS + E + +A
Sbjct: 82 EVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELAL 137
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL +LH I+++D+ +N+LLD E + DFG++K F GT Y+A
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ T+ D +SFGVL+ E + G P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSG----QVVAIKKFHSPLPCDQIADQKEFLIEVKALT 491
+ F+ +G G G V+ + SG Q+ A+K ++ D+ +E L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA--TLKVRDRVRTKMERDILV 82
Query: 492 EIRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVAD 550
E+ H IVK Y F + + +L+ + L G L LS + E + +A
Sbjct: 83 EVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELAL 138
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL +LH I+++D+ +N+LLD E + DFG++K F GT Y+A
Sbjct: 139 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ T+ D +SFGVL+ E + G P
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 11/215 (5%)
Query: 430 EIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVK 488
+I DF+ +G G G V+ AE + Q AIK + + D E + K
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL--MDDDVECTMVEK 69
Query: 489 ALTEIRHRNIVKFYGFCSHARHS--FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ + + + FC+ F V E L G L + S + S+
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAA 126
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY 606
+ L +LH IV++D+ N+LLD + +ADFG+ K + EF GT
Sbjct: 127 EIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTP 183
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
Y+APE+ K D +SFGVL+ E + G+ P
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 14/268 (5%)
Query: 437 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
+F + IG G VYRA L G VA+KK D A + + + E+ L ++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA-RADCIKEIDLLKQLNH 91
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
N++K+Y +V EL + G L+ ++ + L V K S L
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL--IPERTVWKYFVQLCSAL 149
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
H ++H+DI N+ + + D G+ +F +++ GT Y++PE +
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP-PSRSV 674
K D++S G L+ E + P +N +I PP PS
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSP------FYGDKMNLYSLCKKIEQCDYPPLPSDHY 263
Query: 675 QEKLISIMEVAFSCLNESPESRPTMKVV 702
E+L ++ + C+N PE RP + V
Sbjct: 264 SEELRQLVNM---CINPDPEKRPDVTYV 288
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 29/260 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKF-HSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V+ VA+K + D FL E + +++H+ +V+ Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRLY 69
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+ +++ E +E GSL L + + + L ++ +++ +A+ ++++ +
Sbjct: 70 AVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY-- 125
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKI 619
+H+D+ + N+L+ +ADFG+A+ + E + +T G + APE
Sbjct: 126 -IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 620 TEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKL 678
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P + E+L
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCPEEL 234
Query: 679 ISIMEVAFSCLNESPESRPT 698
+M + C E PE RPT
Sbjct: 235 YQLMRL---CWKERPEDRPT 251
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 438 FDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR 496
++ + +G GG G V R +G+ VAIK+ L +++ + +E++ + ++ H
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHP 72
Query: 497 NIVKFY----GFCSHARHSF--LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVAD 550
N+V G A + L E E G L L+ L ++ ++
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAGTYG 607
AL YLH + I+H+D+ +N++L + + D G AK L + TEF GT
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQ 188
Query: 608 YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
Y+APEL K T D +SFG L E I G P
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 438 FDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR 496
++ + +G GG G V R +G+ VAIK+ L +++ + +E++ + ++ H
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHP 73
Query: 497 NIVKFY----GFCSHARHSF--LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVAD 550
N+V G A + L E E G L L+ L ++ ++
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAGTYG 607
AL YLH + I+H+D+ +N++L + + D G AK L + TEF GT
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQ 189
Query: 608 YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
Y+APEL K T D +SFG L E I G P
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 35/263 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 71
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYT 616
+ +H+D+ + N+L+ +ADFG+A+ + E + +T G + APE
Sbjct: 130 Y---IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINY 184
Query: 617 MKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCP 236
Query: 676 EKLISIMEVAFSCLNESPESRPT 698
E+L +M + C E PE RPT
Sbjct: 237 EELYQLMRL---CWKERPEDRPT 256
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 35/263 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 77
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 78 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 135
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYT 616
+ +H+D+ + N+L+ +ADFG+A+ + E + +T G + APE
Sbjct: 136 Y---IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINY 190
Query: 617 MKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P +
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCP 242
Query: 676 EKLISIMEVAFSCLNESPESRPT 698
E+L +M + C E PE RPT
Sbjct: 243 EELYQLMRL---CWKERPEDRPT 262
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + VA+K + P Q + F EV L + RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ S A +V + E SL L E+ + +++ + A + YLH I
Sbjct: 72 Y-STAPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIA--KFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 182
Query: 622 K------CDVYSFGVLVLEAIKGKHP 641
K DVY+FG+++ E + G+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSG----QVVAIKKFHSPLPCDQIADQKEFLIEVKALT 491
+ F+ +G G G V+ + SG Q+ A+K ++ D+ +E L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA--TLKVRDRVRTKMERDILV 81
Query: 492 EIRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVAD 550
E+ H IVK Y F + + +L+ + L G L LS + E + +A
Sbjct: 82 EVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELAL 137
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL +LH I+++D+ +N+LLD E + DFG++K F GT Y+A
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ T+ D +SFGVL+ E + G P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 35/263 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 81
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 82 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 139
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYT 616
+ +H+D+ + N+L+ +ADFG+A+ + E + +T G + APE
Sbjct: 140 Y---IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINY 194
Query: 617 MKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P +
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCP 246
Query: 676 EKLISIMEVAFSCLNESPESRPT 698
E+L +M + C E PE RPT
Sbjct: 247 EELYQLMRL---CWKERPEDRPT 266
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 35/263 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 76
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 77 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 134
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYT 616
+ +H+D+ + N+L+ +ADFG+A+ + E + +T G + APE
Sbjct: 135 Y---IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINY 189
Query: 617 MKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P +
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCP 241
Query: 676 EKLISIMEVAFSCLNESPESRPT 698
E+L +M + C E PE RPT
Sbjct: 242 EELYQLMRL---CWKERPEDRPT 261
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + VA+K + P Q + F EV L + RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L E+ + +++ + A + YLH I
Sbjct: 100 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 153
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIA--KFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 210
Query: 622 K------CDVYSFGVLVLEAIKGKHP 641
K DVY+FG+++ E + G+ P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + VA+K + P Q + F EV L + RH NI+ F G
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L E+ + +++ + A + YLH I
Sbjct: 77 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 130
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIA--KFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 187
Query: 622 K------CDVYSFGVLVLEAIKGKHP 641
K DVY+FG+++ E + G+ P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + VA+K + P Q + F EV L + RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L E+ + +++ + A + YLH I
Sbjct: 72 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIA--KFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 182
Query: 622 K------CDVYSFGVLVLEAIKGKHP 641
K DVY+FG+++ E + G+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 80
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 81 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 138
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG-TYGYVAPELAYTMK 618
+ +H+D+ + N+L+ +ADFG+A+ ++ E A + APE
Sbjct: 139 Y---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 195
Query: 619 ITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P + E+
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCPEE 247
Query: 678 LISIMEVAFSCLNESPESRPT 698
L +M + C E PE RPT
Sbjct: 248 LYQLMRL---CWKERPEDRPT 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 79
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 80 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 137
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG-TYGYVAPELAYTMK 618
+ +H+D+ + N+L+ +ADFG+A+ ++ E A + APE
Sbjct: 138 Y---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 194
Query: 619 ITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P + E+
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCPEE 246
Query: 678 LISIMEVAFSCLNESPESRPT 698
L +M + C E PE RPT
Sbjct: 247 LYQLMRL---CWKERPEDRPT 264
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + VA+K + P Q + F EV L + RH NI+ F G
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L E+ + +++ + A + YLH I
Sbjct: 99 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 152
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIA--KFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 209
Query: 622 K------CDVYSFGVLVLEAIKGKHP 641
K DVY+FG+++ E + G+ P
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + VA+K + P Q + F EV L + RH NI+ F G
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L E+ + +++ + A + YLH I
Sbjct: 77 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 130
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIA--KFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 187
Query: 622 K------CDVYSFGVLVLEAIKGKHP 641
K DVY+FG+++ E + G+ P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + VA+K + P Q + F EV L + RH NI+ F G
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + + +V + E SL L E+ + +++ + A + YLH I
Sbjct: 74 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 127
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIA--KFLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 184
Query: 622 K------CDVYSFGVLVLEAIKGKHP 641
K DVY+FG+++ E + G+ P
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 71
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG-TYGYVAPELAYTMK 618
+ +H+D+ + N+L+ +ADFG+A+ ++ E A + APE
Sbjct: 130 Y---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 619 ITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P + E+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCPEE 238
Query: 678 LISIMEVAFSCLNESPESRPT 698
L +M + C E PE RPT
Sbjct: 239 LYQLMRL---CWKERPEDRPT 256
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 72
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 73 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 130
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG-TYGYVAPELAYTMK 618
+ +H+D+ + N+L+ +ADFG+A+ ++ E A + APE
Sbjct: 131 Y---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 187
Query: 619 ITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P + E+
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCPEE 239
Query: 678 LISIMEVAFSCLNESPESRPT 698
L +M + C E PE RPT
Sbjct: 240 LYQLMRL---CWKERPEDRPT 257
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 73
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 74 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 131
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG-TYGYVAPELAYTMK 618
+ +H+D+ + N+L+ +ADFG+A+ ++ E A + APE
Sbjct: 132 Y---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 188
Query: 619 ITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P + E+
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCPEE 240
Query: 678 LISIMEVAFSCLNESPESRPT 698
L +M + C E PE RPT
Sbjct: 241 LYQLMRL---CWKERPEDRPT 258
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 77
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 78 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 135
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG-TYGYVAPELAYTMK 618
+ +H+D+ + N+L+ +ADFG+A+ ++ E A + APE
Sbjct: 136 Y---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 192
Query: 619 ITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P + E+
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCPEE 244
Query: 678 LISIMEVAFSCLNESPESRPT 698
L +M + C E PE RPT
Sbjct: 245 LYQLMRL---CWKERPEDRPT 262
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 12 NQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDF--NHFTSYLPHNV 69
N G +PP+++ LT L L + + N+SG IP L + T LDF N + LP ++
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ-IKTLVTLDFSYNALSGTLPPSI 145
Query: 70 CRGGALQYFGVSENHFQGTIPKILRNCSSLIR-VRLNSNNLTGNISEALGIYPNLTFIDL 128
L N G IP + S L + ++ N LTG I NL F+DL
Sbjct: 146 SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDL 204
Query: 129 SRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKE 188
SRN G+ S +G ++++ N++ + + +G S L LDL N I G +P+
Sbjct: 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263
Query: 189 LGKLNSLTELILRGNQFTGRLP 210
L +L L L + N G +P
Sbjct: 264 LTQLKFLHSLNVSFNNLCGEIP 285
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 24/239 (10%)
Query: 137 ISSNWGKCPKLGTLNVS-MNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSL 195
I S+ P L L + +NN+ G IP I +QL L ++ ++ G IP L ++ +L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 196 TELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPEXXXXXXXXXXXXXXXXQFXX 255
L N +G LPP I SL +L + NR + ++P+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 256 XXXXXXXXXXXXSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLS------------- 302
+ +D S N+ G+ S K+ +K++L+ N+L+
Sbjct: 188 GKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLN 247
Query: 303 ----------GSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCG 351
G++P ++ + +++S N L G +P + V A NK LCG
Sbjct: 248 GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLE--NPMLTRPGLDF 58
+++L LD + N G LPPS+S+L NL + N +SG IP S + + T +
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Query: 59 NHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALG 118
N T +P L + +S N +G + + + ++ L N+L ++ + +G
Sbjct: 184 NRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VG 241
Query: 119 IYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLS 177
+ NL +DL N YG + + L +LNVS NN+ G IP+ LQ D+S
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ----GGNLQRFDVS 296
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 102/244 (41%), Gaps = 52/244 (21%)
Query: 20 PSVSNLTNLKELVLLY----NNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGAL 75
P S+L NL L LY NNL G IPP++ LT+ L
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAK--LTQ---------------------L 103
Query: 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYG 135
Y ++ + G IP L +L+ + + N L+G + ++ PNL I N G
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG 163
Query: 136 EISSNWGKCPKLGT-LNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGE---------- 184
I ++G KL T + +S N +TG IP N + L +DLS N + G+
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKN 222
Query: 185 ----------IPKELGKL---NSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNN 231
+ +LGK+ +L L LR N+ G LP + L L L++S N
Sbjct: 223 TQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282
Query: 232 SVPE 235
+P+
Sbjct: 283 EIPQ 286
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 4/189 (2%)
Query: 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFN 59
+ L L + G +P +S + L L YN LSG +PPS+ + P L D N
Sbjct: 100 LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159
Query: 60 HFTSYLPHNVCRGGAL-QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALG 118
+ +P + L +S N G IP N +L V L+ N L G+ S G
Sbjct: 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFG 218
Query: 119 IYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSL 178
N I L++N ++ G L L++ N I G +P+ + L +L++S
Sbjct: 219 SDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF 277
Query: 179 NHIVGEIPK 187
N++ GEIP+
Sbjct: 278 NNLCGEIPQ 286
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 71
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG-TYGYVAPELAYTMK 618
+ +H+D+ + N+L+ +ADFG+A+ ++ E A + APE
Sbjct: 130 Y---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 619 ITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P + E+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCPEE 238
Query: 678 LISIMEVAFSCLNESPESRPT 698
L +M + C E PE RPT
Sbjct: 239 LYQLMRL---CWKERPEDRPT 256
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G G V+ VA+K SP FL E + +++H+ +V
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLV 71
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ Y + +++ E +E GSL L + + + L ++ +++ +A+ ++++
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG-TYGYVAPELAYTMK 618
+ +H+D+ + N+L+ +ADFG+A+ ++ E A + APE
Sbjct: 130 Y---IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT 186
Query: 619 ITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P + E+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCPEE 238
Query: 678 LISIMEVAFSCLNESPESRPT 698
L +M + C E PE RPT
Sbjct: 239 LYQLMRL---CWKERPEDRPT 256
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 56 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + Y
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 166
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 167 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 276
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 277 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 309
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 57 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + Y
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 167
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 168 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 277
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 278 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 310
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 147
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS----NWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 148 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 257
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 258 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 443 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI--RHRNIVK 500
C+G G +G V+R L G+ VA+K F S D++ + E + + RH NI+
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSS-------RDEQSWFRETEIYNTVLLRHDNILG 66
Query: 501 FYGFCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
F +R+S +L+ E GSL L T L + + A L++LH
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLH 122
Query: 557 HDCF-----PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA-----GTY 606
+ F P I H+D S+N+L+ + +AD G+A + + S++ + GT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTK 181
Query: 607 GYVAPELAYTMKITEKC-------DVYSFGVLVLEAIK 637
Y+APE+ +I C D+++FG+++ E +
Sbjct: 182 RYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIAR 218
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 29/260 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKF-HSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V+ VA+K + D FL E + +++H+ +V+ Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEANLMKQLQHQRLVRLY 70
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+ +++ E +E GSL L + + + L ++ +++ +A+ ++++ +
Sbjct: 71 AVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY-- 126
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGYVAPELAYTMKI 619
+H+++ + N+L+ +ADFG+A+ + E + +T G + APE
Sbjct: 127 -IHRNLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 620 TEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKL 678
T K DV+SFG+L+ E + G+ P ++ N ++ + R+ P + E+L
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPD-NCPEEL 235
Query: 679 ISIMEVAFSCLNESPESRPT 698
+M + C E PE RPT
Sbjct: 236 YQLMRL---CWKERPEDRPT 252
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 29/273 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 30 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
G C + S +V ++ G L + ++T + + VA + YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 144
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVAPELA 614
F VH+D++++N +LD ++ VADFG+A+ + + N T ++A E
Sbjct: 145 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPPPSRS 673
T K T K DV+SFGVL+ E + P +NT DI + + RL P
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQPEYC 254
Query: 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ EV C + E RP+ + ++
Sbjct: 255 PD----PLYEVMLKCWHPKAEMRPSFSELVSRI 283
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 148
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 149 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 258
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 259 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+DF+ +G G G V++ + PSG V+A K H + + A + + + E++ L E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 124
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-SDTAAQELGWSQRMNVIKGVADALS 553
IV FYG + E ++ GSL +L + +++ + VIKG L+
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 180
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
YL I+H+D+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 181 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 236
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G+ ++E G++P
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 35 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + Y
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 145
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 146 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 255
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 256 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 288
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 13/183 (7%)
Query: 459 SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH--ARHSFLVYE 516
+G+ VA+K + IAD K+ E++ L + H NIVK+ G C+ L+ E
Sbjct: 37 TGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIME 93
Query: 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576
L GSL L + ++ Q++ + + YL + VH+D++++N+L++
Sbjct: 94 FLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVE 148
Query: 577 LEYEAHVADFGIAKFLKPESSNWT---EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVL 633
E++ + DFG+ K ++ + T + + APE K DV+SFGV +
Sbjct: 149 SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH 208
Query: 634 EAI 636
E +
Sbjct: 209 ELL 211
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIK-----KFHSPLPCDQIADQK 481
YDE+++ ++ IG GG V A + +G++VAIK S LP
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLP-------- 53
Query: 482 EFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSL-AAILSSDTAAQELGWSQ 540
E++AL +RH++I + Y A F+V E G L I+S D ++E +
Sbjct: 54 RIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE----E 109
Query: 541 RMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI-AKFLKPESSNW 599
V + + A++Y+H + H+D+ +NLL D ++ + DFG+ AK + +
Sbjct: 110 TRVVFRQIVSAVAYVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166
Query: 600 TEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRD 643
G+ Y APEL + + DV+S G+L+ + G P D
Sbjct: 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 13/183 (7%)
Query: 459 SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH--ARHSFLVYE 516
+G+ VA+K + IAD K+ E++ L + H NIVK+ G C+ L+ E
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105
Query: 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576
L GSL L + ++ Q++ + + YL + VH+D++++N+L++
Sbjct: 106 FLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVE 160
Query: 577 LEYEAHVADFGIAKFLKPESSNWT---EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVL 633
E++ + DFG+ K ++ + T + + APE K DV+SFGV +
Sbjct: 161 SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH 220
Query: 634 EAI 636
E +
Sbjct: 221 ELL 223
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 29/273 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 33 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
G C + S +V ++ G L + ++T + + VA + YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 147
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVAPELA 614
F VH+D++++N +LD ++ VADFG+A+ + + N T ++A E
Sbjct: 148 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPPPSRS 673
T K T K DV+SFGVL+ E + P +NT DI + + RL P
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQPEYC 257
Query: 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ EV C + E RP+ + ++
Sbjct: 258 PD----PLYEVMLKCWHPKAEMRPSFSELVSRI 286
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 29/273 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
G C + S +V ++ G L + ++T + + VA + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 151
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVAPELA 614
F VH+D++++N +LD ++ VADFG+A+ + + N T ++A E
Sbjct: 152 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPPPSRS 673
T K T K DV+SFGVL+ E + P +NT DI + + RL P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ EV C + E RP+ + ++
Sbjct: 262 PD----PLYEVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 482 EFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR 541
+ L EV L + H NI+K Y F R+ +LV E + G L + E+ +
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV- 140
Query: 542 MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD-LEYEA--HVADFGIAKFLKPESSN 598
+IK V ++YLH IVH+D+ +NLLL+ E +A + DFG++ + +
Sbjct: 141 --IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-KK 194
Query: 599 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E GT Y+APE+ K EKCDV+S GV++ + G P
Sbjct: 195 MKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 29/273 (10%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
G C + S +V ++ G L + ++T + + VA + YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 150
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVAPELA 614
F VH+D++++N +LD ++ VADFG+A+ + + N T ++A E
Sbjct: 151 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPPPSRS 673
T K T K DV+SFGVL+ E + P +NT DI + + RL P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+ EV C + E RP+ + ++
Sbjct: 261 PD----PLYEVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 148
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 149 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 258
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 259 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+DF+ +G G G V++ + PSG V+A K H + + A + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-SDTAAQELGWSQRMNVIKGVADALS 553
IV FYG + E ++ GSL +L + +++ + VIKG L+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
YL I+H+D+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G+ ++E G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+DF+ +G G G V++ + PSG V+A K H + + A + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-SDTAAQELGWSQRMNVIKGVADALS 553
IV FYG + E ++ GSL +L + +++ + VIKG L+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
YL I+H+D+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G+ ++E G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+DF+ +G G G V++ + PSG V+A K H + + A + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-SDTAAQELGWSQRMNVIKGVADALS 553
IV FYG + E ++ GSL +L + +++ + VIKG L+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
YL I+H+D+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G+ ++E G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+DF+ +G G G V++ + PSG V+A K H + + A + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-SDTAAQELGWSQRMNVIKGVADALS 553
IV FYG + E ++ GSL +L + +++ + VIKG L+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
YL I+H+D+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G+ ++E G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 112/253 (44%), Gaps = 53/253 (20%)
Query: 436 NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKA----- 489
DF +G G G V+ +G+ A+K +KE ++ +K
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL-----------KKEIVVRLKQVEHTN 54
Query: 490 -----LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN- 543
L+ + H I++ +G A+ F++ + +E G L ++L SQR
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK---------SQRFPN 105
Query: 544 -VIKGVAD----ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598
V K A AL YLH I+++D+ +N+LLD + DFG AK++ P+ +
Sbjct: 106 PVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT- 160
Query: 599 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIA 658
GT Y+APE+ T + D +SFG+L+ E + G P S+++ T
Sbjct: 161 -YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP-----FYDSNTMKT--- 211
Query: 659 LDEILDP--RLPP 669
++IL+ R PP
Sbjct: 212 YEKILNAELRFPP 224
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 436 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+DF+ +G G G V++ + PSG V+A K H + + A + + + E++ L E
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 89
Query: 495 HRNIVKFYG-FCSHARHSFLVYELLERGSLAAILS-SDTAAQELGWSQRMNVIKGVADAL 552
IV FYG F S S + E ++ GSL +L + +++ + VIKG L
Sbjct: 90 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 144
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
+YL I+H+D+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 145 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 200
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G+ ++E G++P
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG+G G+VY+ + V I K P P +Q + F EV L + RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTP-EQF---QAFRNEVAVLRKTRHVNILLFMG 99
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ + + +V + E SL L ++ Q +++ + A + YLH I
Sbjct: 100 YMTKDNLA-IVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAKN---I 153
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFAGTYGYVAPELAYTM 617
+H+D+ S N+ L + DFG+A S W+ + G+ ++APE+
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 618 K---ITEKCDVYSFGVLVLEAIKGKHP 641
+ + DVYS+G+++ E + G+ P
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 59/305 (19%)
Query: 432 VRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKF-HSPLPCDQIADQKEFLIEVKA 489
+R +DF+ +G G G V +A + AIKK H+ I L EV
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI------LSEVML 55
Query: 490 LTEIRHRNIVKFYGFCSHARHS-------------FLVYELLERGSLAAILSSDTAAQEL 536
L + H+ +V++Y R+ F+ E E +L ++ S+ Q+
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR 115
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK------ 590
R+ + + +ALSY+H I+H+D+ N+ +D + DFG+AK
Sbjct: 116 DEYWRL--FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 591 -FLKPE-------SSNWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAI----K 637
LK + S N T GT YVA E L T EK D+YS G++ E I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
Query: 638 GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRP 697
G + L + S S+ P V++K+I ++ ++ P RP
Sbjct: 231 GMERVNILKKLRSVSIE--------FPPDFDDNKMKVEKKIIRLL------IDHDPNKRP 276
Query: 698 TMKVV 702
+ +
Sbjct: 277 GARTL 281
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 29/256 (11%)
Query: 459 SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHSFLVYE 516
+G++VA+K + + K+ E+ L + H +I+K+ G C + LV E
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576
+ GSL L + +G +Q + + + + ++YLH + +H++++++N+LLD
Sbjct: 99 YVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLLD 151
Query: 577 LEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPELAYTMKITEKCDVYSFGVLV 632
+ + DFG+AK + PE + + APE K DV+SFGV +
Sbjct: 152 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 633 LEAI-----KGKHPRDFLSLIS-SSSLNTDIALDEILD--PRLPPPSRSVQEKLISIMEV 684
E + P FL LI + T + L E+L+ RLP P + E + +
Sbjct: 211 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCE----VYHL 266
Query: 685 AFSCLNESPESRPTMK 700
+C RPT +
Sbjct: 267 MKNCWETEASFRPTFE 282
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 29/256 (11%)
Query: 459 SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHSFLVYE 516
+G++VA+K + + K+ E+ L + H +I+K+ G C + LV E
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576
+ GSL L + +G +Q + + + + ++YLH + +H++++++N+LLD
Sbjct: 99 YVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLLD 151
Query: 577 LEYEAHVADFGIAKFLKPESSNWTEFA----GTYGYVAPELAYTMKITEKCDVYSFGVLV 632
+ + DFG+AK + PE + + APE K DV+SFGV +
Sbjct: 152 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 633 LEAI-----KGKHPRDFLSLIS-SSSLNTDIALDEILD--PRLPPPSRSVQEKLISIMEV 684
E + P FL LI + T + L E+L+ RLP P + E + +
Sbjct: 211 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCE----VYHL 266
Query: 685 AFSCLNESPESRPTMK 700
+C RPT +
Sbjct: 267 MKNCWETEASFRPTFE 282
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 433 RATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALT 491
R DF+ C+G GG G V+ A+ AIK+ LP ++A +K + EVKAL
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREK-VMREVKALA 58
Query: 492 EIRHRNIVKFYGF------------CSHARHSFLVYELLERGSLAAILSSDTAAQELGWS 539
++ H IV+++ S + ++ +L + +L ++ +E S
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK------ 593
+++ +A+A+ +LH ++H+D+ N+ ++ V DFG+ +
Sbjct: 119 VCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 594 ------PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
P + T GT Y++PE + + K D++S G+++ E +
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
++DF + +G G +G V A P+G++VAIKK P D+ L E+K L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHF 66
Query: 494 RHRNIVKFYGF-----CSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+H NI+ + + +++ EL++ L ++S+ Q L I
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQT 121
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP----------ESSN 598
A+ LH ++H+D+ NLL++ + V DFG+A+ + + S
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 599 WTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLE 634
TE+ T Y APE+ T K + DV+S G ++ E
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIE 486
+D ++++ IGNG +G V A +GQ VAIKK P D + + K L E
Sbjct: 47 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAKRTLRE 104
Query: 487 VKALTEIRHRNIVKF---------YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELG 537
+K L +H NI+ YG + ++V +L+E L I+ S +Q L
Sbjct: 105 LKILKHFKHDNIIAIKDILRPTVPYG---EFKSVYVVLDLME-SDLHQIIHS---SQPLT 157
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL--KPE 595
+ + L Y+H ++H+D+ NLL++ E + DFG+A+ L P
Sbjct: 158 LEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 214
Query: 596 SSNW--TEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKH 640
+ TE+ T Y APEL ++ + T+ D++S G + E + +
Sbjct: 215 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 438 FDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFH---SPLPCDQIADQKEFLI-EVKALTE 492
+D + IG G V R +G A+K L +Q+ + +E E L +
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 493 IR-HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADA 551
+ H +I+ + FLV++L+ +G L L+ A E + ++++ + +A
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE---KETRSIMRSLLEA 212
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
+S+LH + IVH+D+ +N+LLD + ++DFG + L+P E GT GY+AP
Sbjct: 213 VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLRELCGTPGYLAP 268
Query: 612 E-LAYTMKIT-----EKCDVYSFGVLVLEAIKGKHP 641
E L +M T ++ D+++ GV++ + G P
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 31/273 (11%)
Query: 444 IGNGGHGSVYRA--ELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G G GSV + + Q+ VAIK + AD +E + E + + ++ + IV+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG---TEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
G C A LV E+ G L L +E+ S ++ V+ + YL F
Sbjct: 75 LIGVC-QAEALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT-EFAGTY--GYVAPELAYTM 617
VH+D++++N+LL + A ++DFG++K L + S +T AG + + APE
Sbjct: 132 ---VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILD--PRLPPPSRSV 674
K + + DV+S+GV + EA+ G+ P + + I + ++ P PP
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKP---YKKMKGPEVMAFIEQGKRMECPPECPP----- 240
Query: 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707
+L ++M C E RP V Q++R
Sbjct: 241 --ELYALMS---DCWIYKWEDRPDFLTVEQRMR 268
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 149
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK-FLKPESSNWTEFAGT---YGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ L E + G ++A
Sbjct: 150 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 259
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 260 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 97 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 207
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 208 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 317
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 318 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 350
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 444 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G GG + E+ +G++V P +++ +E+ + H++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 78
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+V F+GF F+V EL R SL + A E + ++ + YLH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHR 135
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM 617
+ ++H+D+ NL L+ + E + DFG+A ++ + GT Y+APE+
Sbjct: 136 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 618 KITEKCDVYSFGVLVLEAIKGKHP 641
+ + DV+S G ++ + GK P
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIE 486
+D ++++ IGNG +G V A +GQ VAIKK P D + + K L E
Sbjct: 46 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAKRTLRE 103
Query: 487 VKALTEIRHRNIVKFYGFCSHA------RHSFLVYELLERGSLAAILSSDTAAQELGWSQ 540
+K L +H NI+ + ++V +L+E L I+ S +Q L
Sbjct: 104 LKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHS---SQPLTLEH 159
Query: 541 RMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL--KPESSN 598
+ + L Y+H ++H+D+ NLL++ E + DFG+A+ L P
Sbjct: 160 VRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 216
Query: 599 W--TEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKH 640
+ TE+ T Y APEL ++ + T+ D++S G + E + +
Sbjct: 217 YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 149
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 150 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 259
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 260 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 43 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + +
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 153
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 154 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 263
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 264 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 296
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 148
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 149 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 258
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 259 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
++DF + +G G +G V A P+G++VAIKK P D+ L E+K L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHF 66
Query: 494 RHRNIVKFYGF-----CSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+H NI+ + + +++ EL++ L ++S+ Q L I
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQT 121
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP----------ESSN 598
A+ LH ++H+D+ NLL++ + V DFG+A+ + + S
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 599 WTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLE 634
EF T Y APE+ T K + DV+S G ++ E
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E + F T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
ND Q IG G G V +A + + AIK+ D D ++F E++ L +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCK 81
Query: 493 IRHR-NIVKFYGFCSHARHSFLVYELLERGSL------AAILSSDTA-------AQELGW 538
+ H NI+ G C H + +L E G+L + +L +D A A L
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 539 SQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598
Q ++ VA + YL F +H+D++++N+L+ Y A +ADFG+++ +
Sbjct: 142 QQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 599 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
L Y++ T DV+S+GVL+ E +
Sbjct: 199 TMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIV 235
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 22/255 (8%)
Query: 444 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G GG + E+ +G++V P +++ +E+ + H++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 78
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+V F+GF F+V EL R SL + A E + ++ + YLH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHR 135
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM 617
+ ++H+D+ NL L+ + E + DFG+A ++ + GT Y+APE+
Sbjct: 136 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 618 KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPPPSRSVQE 676
+ + DV+S G ++ + GK P + S + + L I +E P+ + P + S+ +
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR--IKKNEYSIPKHINPVAASLIQ 249
Query: 677 KLISIMEVAFSCLNE 691
K++ A +NE
Sbjct: 250 KMLQTDPTARPTINE 264
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 146
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 147 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 256
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 257 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E + F T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
ND Q IG G G V +A + + AIK+ D D ++F E++ L +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCK 71
Query: 493 IRHR-NIVKFYGFCSHARHSFLVYELLERGSL------AAILSSDTA-------AQELGW 538
+ H NI+ G C H + +L E G+L + +L +D A A L
Sbjct: 72 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 539 SQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598
Q ++ VA + YL F +H+D++++N+L+ Y A +ADFG+++ +
Sbjct: 132 QQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 188
Query: 599 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
L Y++ T DV+S+GVL+ E +
Sbjct: 189 TMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIV 225
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLP----CDQIADQKEFLIEVKALTEIRHRNIV 499
IG G G VY L KK H + I + +FL E + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 500 KFYGFCSHARHS-FLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSY 554
G C + S +V ++ G L + ++T +G+ + VA + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 148
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES----SNWTEFAGTYGYVA 610
L F VH+D++++N +LD ++ VADFG+A+ + + N T ++A
Sbjct: 149 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLPP 669
E T K T K DV+SFGVL+ E + P +NT DI + + RL
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQ 258
Query: 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P + EV C + E RP+ + ++
Sbjct: 259 PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+DF+ +G G G V + + PSG ++A K H + + A + + + E++ L E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECN 72
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-SDTAAQELGWSQRMNVIKGVADALS 553
IV FYG + E ++ GSL +L + +E+ + V++G L+
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRG----LA 128
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
YL I+H+D+ N+L++ E + DFG++ L +N F GT Y+APE
Sbjct: 129 YLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPER 184
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G+ ++E G++P
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E + F T Y APE+
Sbjct: 139 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLN 192
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 444 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G GG + E+ +G++V P +++ +E+ + H++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 82
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+V F+GF F+V EL R SL + A E + ++ + YLH
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHR 139
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM 617
+ ++H+D+ NL L+ + E + DFG+A ++ + GT Y+APE+
Sbjct: 140 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 196
Query: 618 KITEKCDVYSFGVLVLEAIKGKHP 641
+ + DV+S G ++ + GK P
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 63
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 64 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 120 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 162 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 215
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 163 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 216
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKML 61
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKML 61
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 148 S---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 201
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 444 IGNGGHGSVYRAELPSG------QVVAIKKFHSPLPCDQIAD----QKEFLIEVKALTEI 493
+G+G +G V + +G +V+ +F D + +E E+ L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
H NI+K + ++ +LV E E G L + + E + N++K + +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA---NIMKQILSGIC 160
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLE---YEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH IVH+DI +N+LL+ + + DFG++ F + + GT Y+A
Sbjct: 161 YLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRLGTAYYIA 216
Query: 611 PELAYTMKITEKCDVYSFGVLV 632
PE+ K EKCDV+S GV++
Sbjct: 217 PEVL-KKKYNEKCDVWSCGVIM 237
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 444 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G GG + E+ +G++V P +++ +E+ + H++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 100
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+V F+GF F+V EL R SL + A E + ++ + YLH
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHR 157
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM 617
+ ++H+D+ NL L+ + E + DFG+A ++ + GT Y+APE+
Sbjct: 158 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 618 KITEKCDVYSFGVLVLEAIKGKHP 641
+ + DV+S G ++ + GK P
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 444 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G GG + E+ +G++V P +++ +E+ + H++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 102
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+V F+GF F+V EL R SL + A E + ++ + YLH
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHR 159
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM 617
+ ++H+D+ NL L+ + E + DFG+A ++ + GT Y+APE+
Sbjct: 160 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 618 KITEKCDVYSFGVLVLEAIKGKHP 641
+ + DV+S G ++ + GK P
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 59/305 (19%)
Query: 432 VRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKF-HSPLPCDQIADQKEFLIEVKA 489
+R +DF+ +G G G V +A + AIKK H+ I L EV
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI------LSEVXL 55
Query: 490 LTEIRHRNIVKFYGFCSHARHS-------------FLVYELLERGSLAAILSSDTAAQEL 536
L + H+ +V++Y R+ F+ E E +L ++ S+ Q+
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR 115
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK------ 590
R+ + + +ALSY+H I+H+++ N+ +D + DFG+AK
Sbjct: 116 DEYWRL--FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 591 -FLKPE-------SSNWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAI----K 637
LK + S N T GT YVA E L T EK D YS G++ E I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFST 230
Query: 638 GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRP 697
G + L + S S+ P V++K+I ++ ++ P RP
Sbjct: 231 GXERVNILKKLRSVSIE--------FPPDFDDNKXKVEKKIIRLL------IDHDPNKRP 276
Query: 698 TMKVV 702
+ +
Sbjct: 277 GARTL 281
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 63
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 64 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 120 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 63
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 64 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 120 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKML 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 120 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 63
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 64 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 120 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 139 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 192
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
H NIVK + H+FLV ELL G L + E ++ +++ + A+S+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSE---TEASYIMRKLVSAVSH 121
Query: 555 LHHDCFPPIVHQDISSKNLLLDLE---YEAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
+H +VH+D+ +NLL E E + DFG A+ P++ T Y AP
Sbjct: 122 MHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 612 ELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
EL E CD++S GV++ + G+ P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 20/251 (7%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSP--LPCDQIADQKEFLIEVKALTE 492
NDFD +G G G V E +G+ A+K + D++A + E + L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 61
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E +R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVS 116
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH +V++DI +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P F + L I ++EI PR L P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQ-DHERLFELILMEEIRFPRTLSP 230
Query: 670 PSRSVQEKLIS 680
++S+ L+
Sbjct: 231 EAKSLLAGLLK 241
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 11/215 (5%)
Query: 430 EIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVK 488
+I DF +G G G V+ AE + Q AIK + + D E + K
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL--MDDDVECTMVEK 68
Query: 489 ALTEIRHRNIVKFYGFCSHARHS--FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546
+ + + + FC+ F V E L G L + S + S+
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAA 125
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY 606
+ L +LH IV++D+ N+LLD + +ADFG+ K + F GT
Sbjct: 126 EIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTP 182
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
Y+APE+ K D +SFGVL+ E + G+ P
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 97
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 98 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 152
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 153 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 206
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 61
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 62 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 117
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 118 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 63
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 64 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 63
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 64 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 120 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 105/245 (42%), Gaps = 20/245 (8%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSP--LPCDQIADQKEFLIEVKALTE 492
NDFD +G G G V E +G+ A+K + D++A + E + L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 61
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E +R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVS 116
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH +V++DI +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P L I ++EI PR L P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSP 230
Query: 670 PSRSV 674
++S+
Sbjct: 231 EAKSL 235
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 105/245 (42%), Gaps = 20/245 (8%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSP--LPCDQIADQKEFLIEVKALTE 492
NDFD +G G G V E +G+ A+K + D++A + E + L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 61
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E +R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVS 116
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH +V++DI +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P L I ++EI PR L P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSP 230
Query: 670 PSRSV 674
++S+
Sbjct: 231 EAKSL 235
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 107/245 (43%), Gaps = 20/245 (8%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSP--LPCDQIADQKEFLIEVKALTE 492
NDFD +G G G V E +G+ A+K + D++A + E + L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 61
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E +R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVS 116
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH +V++DI +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P F + L I ++EI PR L P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQ-DHERLFELILMEEIRFPRTLSP 230
Query: 670 PSRSV 674
++S+
Sbjct: 231 EAKSL 235
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 105/245 (42%), Gaps = 20/245 (8%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSP--LPCDQIADQKEFLIEVKALTE 492
NDFD +G G G V E +G+ A+K + D++A + E + L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 61
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E +R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVS 116
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH +V++DI +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P L I ++EI PR L P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSP 230
Query: 670 PSRSV 674
++S+
Sbjct: 231 EAKSL 235
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 32/263 (12%)
Query: 444 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G GG + E+ +G++V P +++ +E+ + H++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 76
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+V F+GF F+V EL R SL + A E + ++ + YLH
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHR 133
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM 617
+ ++H+D+ NL L+ + E + DFG+A ++ + GT Y+APE+
Sbjct: 134 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 618 KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPPPSRSVQE 676
+ + DV+S G ++ + GK P + S + + L I +E P+ + P + S+ +
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR--IKKNEYSIPKHINPVAASLIQ 247
Query: 677 KLISIMEVAFSCLNESPESRPTM 699
K+ L P +RPT+
Sbjct: 248 KM----------LQTDPTARPTI 260
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 105/245 (42%), Gaps = 20/245 (8%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSP--LPCDQIADQKEFLIEVKALTE 492
NDFD +G G G V E +G+ A+K + D++A + E + L
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 66
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E +R +
Sbjct: 67 TRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVS 121
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH +V++DI +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 122 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 178
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P L I ++EI PR L P
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSP 235
Query: 670 PSRSV 674
++S+
Sbjct: 236 EAKSL 240
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
++DF + +G G +G V A P+G++VAIKK P D+ L E+K L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHF 66
Query: 494 RHRNIVKFYGF-----CSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+H NI+ + + +++ EL++ L ++S+ Q L I
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQT 121
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP----------ESSN 598
A+ LH ++H+D+ NLL++ + V DFG+A+ + + S
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 599 WTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLE 634
TE T Y APE+ T K + DV+S G ++ E
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 154 S---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 207
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 155 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 208
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 155 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 208
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ + K L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 148 S---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 201
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 155 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 208
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 105/245 (42%), Gaps = 20/245 (8%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSP--LPCDQIADQKEFLIEVKALTE 492
NDFD +G G G V E +G+ A+K + D++A + E + L
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 64
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E +R +
Sbjct: 65 TRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVS 119
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH +V++DI +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 120 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 176
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P L I ++EI PR L P
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSP 233
Query: 670 PSRSV 674
++S+
Sbjct: 234 EAKSL 238
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G +G V A + + VA+K D + K+ E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAML 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 162 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 215
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 24/237 (10%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIAD 479
V DE A +G G G VY + G V VAIK + + +
Sbjct: 1 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 56
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE---- 535
+ EFL E + E ++V+ G S + + ++ EL+ RG L + L S E
Sbjct: 57 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 116
Query: 536 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592
S+ + + +AD ++YL+ + F VH+D++++N ++ ++ + DFG+ + +
Sbjct: 117 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 173
Query: 593 KPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
G +++PE T DV+SFGV++ E A + P LS
Sbjct: 174 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 230
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 163 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 216
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 140 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 193
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 154 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 207
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY- 615
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 616 TMKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 166 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 219
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 140 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 193
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 139 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 192
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 145 S---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 198
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 149 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 202
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 145 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 198
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 140
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 141 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 194
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 145 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 198
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 150 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM---TGYVATRWYRAPEIMLN 203
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 150 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 203
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 149 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 202
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 148 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 201
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 149 S---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 202
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 148 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 201
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 141
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 142 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 195
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +G V + +G AIK ++ L EV L ++ H NI+K Y
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKS-SVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
F R+ +LV E+ G L Q+ ++K V +YLH
Sbjct: 88 EFFEDKRNYYLVMEVYRGGEL---FDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH---N 141
Query: 563 IVHQDISSKNLLLDLEYE---AHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKI 619
IVH+D+ +NLLL+ + + DFG++ + E GT Y+APE+ K
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEVL-RKKY 199
Query: 620 TEKCDVYSFGVLVLEAIKGKHP 641
EKCDV+S GV++ + G P
Sbjct: 200 DEKCDVWSCGVILYILLCGYPP 221
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
ND Q IG G G V +A + + AIK+ D D ++F E++ L +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCK 78
Query: 493 IRHR-NIVKFYGFCSHARHSFLVYELLERGSL------AAILSSDTA-------AQELGW 538
+ H NI+ G C H + +L E G+L + +L +D A A L
Sbjct: 79 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 539 SQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598
Q ++ VA + YL F +H++++++N+L+ Y A +ADFG+++ +
Sbjct: 139 QQLLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSRGQEVYVKK 195
Query: 599 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
L Y++ T DV+S+GVL+ E +
Sbjct: 196 TMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIV 232
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 150 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM---TGYVATRWYRAPEIMLN 203
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +G V + +G AIK ++ L EV L ++ H NI+K Y
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKS-SVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
F R+ +LV E+ G L Q+ ++K V +YLH
Sbjct: 71 EFFEDKRNYYLVMEVYRGGEL---FDEIILRQKFSEVDAAVIMKQVLSGTTYLHK---HN 124
Query: 563 IVHQDISSKNLLLDLEYE---AHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKI 619
IVH+D+ +NLLL+ + + DFG++ + E GT Y+APE+ K
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEV-LRKKY 182
Query: 620 TEKCDVYSFGVLV 632
EKCDV+S GV++
Sbjct: 183 DEKCDVWSCGVIL 195
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 150 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM---TGYVATRWYRAPEIMLN 203
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 145 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 198
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 31/273 (11%)
Query: 444 IGNGGHGSVYRA--ELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G G GSV + + Q+ VAIK + AD +E + E + + ++ + IV+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ---GTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
G C A LV E+ G L L +E+ S ++ V+ + YL F
Sbjct: 401 LIGVC-QAEALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT-EFAGTY--GYVAPELAYTM 617
VH++++++N+LL + A ++DFG++K L + S +T AG + + APE
Sbjct: 458 ---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILD--PRLPPPSRSV 674
K + + DV+S+GV + EA+ G+ P + + I + ++ P PP
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKP---YKKMKGPEVMAFIEQGKRMECPPECPP----- 566
Query: 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707
+L ++M C E RP V Q++R
Sbjct: 567 --ELYALMS---DCWIYKWEDRPDFLTVEQRMR 594
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 24/237 (10%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIAD 479
V DE A +G G G VY + G V VAIK + + +
Sbjct: 10 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 65
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE---- 535
+ EFL E + E ++V+ G S + + ++ EL+ RG L + L S E
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 536 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592
S+ + + +AD ++YL+ + F VH+D++++N ++ ++ + DFG+ + +
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 593 KPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
G +++PE T DV+SFGV++ E A + P LS
Sbjct: 183 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 239
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
D+D +G G G V A + + VA+K D + K+ + K L
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-- 62
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM--NVIKGVADA 551
H N+VKFYG +L E G L + D E +QR ++ GV
Sbjct: 63 -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYV 609
YLH I H+DI +NLLLD ++DFG+A + + + GT YV
Sbjct: 119 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 610 APELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRD 643
APEL + E DV+S G+++ + G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 149 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 202
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIAD 479
V DE A +G G G VY + G V VAIK + + +
Sbjct: 3 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 58
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE---- 535
+ EFL E + E ++V+ G S + + ++ EL+ RG L + L S E
Sbjct: 59 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 536 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592
S+ + + +AD ++YL+ + F VH+D++++N ++ ++ + DFG+ + +
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 175
Query: 593 KPESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
+++ G +++PE T DV+SFGV++ E A + P LS
Sbjct: 176 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 29/272 (10%)
Query: 437 DFDAQY-------CIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVK 488
++D +Y +G G +G VY S QV +AIK+ +P + E+
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKE----IPERDSRYSQPLHEEIA 57
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
++H+NIV++ G S + E + GSL+A+L S + K +
Sbjct: 58 LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI 117
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA--HVADFGIAKFLKPESSNWTEFAGTY 606
+ L YLH + IVH+DI N+L++ Y ++DFG +K L + F GT
Sbjct: 118 LEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTL 173
Query: 607 GYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD 664
Y+APE+ + D++S G ++E GK P F L + + + ++
Sbjct: 174 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP--FYELGEPQAAMFKVGMFKV-H 230
Query: 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESR 696
P +P + + I C P+ R
Sbjct: 231 PEIPESMSAEAKAFI------LKCFEPDPDKR 256
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V++ +GQ+VAIKKF D +K L E++ L +++H N+V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR---MNVIKGVA----DALSYL 555
R LV+E + T EL QR +++K + A+++
Sbjct: 69 EVFRRKRRLHLVFEYCDH----------TVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 556 H-HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
H H+C +H+D+ +N+L+ + DFG A+ L S + + T Y +PEL
Sbjct: 119 HKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELL 174
Query: 615 Y-TMKITEKCDVYSFGVLVLEAIKG 638
+ DV++ G + E + G
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIAD 479
V DE A +G G G VY + G V VAIK + + +
Sbjct: 9 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 64
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE---- 535
+ EFL E + E ++V+ G S + + ++ EL+ RG L + L S E
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 536 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592
S+ + + +AD ++YL+ + F VH+D++++N ++ ++ + DFG+ + +
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 593 KPESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
+++ G +++PE T DV+SFGV++ E A + P LS
Sbjct: 182 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 238
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 437 DFDAQY-------CIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVK 488
++D +Y +G G +G VY S QV +AIK+ +P + E+
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKE----IPERDSRYSQPLHEEIA 71
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTA-----AQELGWSQRMN 543
++H+NIV++ G S + E + GSL+A+L S Q +G+
Sbjct: 72 LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF----- 126
Query: 544 VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA--HVADFGIAKFLKPESSNWTE 601
K + + L YLH + IVH+DI N+L++ Y ++DFG +K L +
Sbjct: 127 YTKQILEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTET 182
Query: 602 FAGTYGYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKHP 641
F GT Y+APE+ + D++S G ++E GK P
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIAD 479
V DE A +G G G VY + G V VAIK + + +
Sbjct: 16 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 71
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE---- 535
+ EFL E + E ++V+ G S + + ++ EL+ RG L + L S E
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 536 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592
S+ + + +AD ++YL+ + F VH+D++++N ++ ++ + DFG+ + +
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 593 KPESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
+++ G +++PE T DV+SFGV++ E A + P LS
Sbjct: 189 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 28/240 (11%)
Query: 426 LVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIA 478
V DE A +G G G VY + G V VAIK + +
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMR 61
Query: 479 DQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE--- 535
++ EFL E + E ++V+ G S + + ++ EL+ RG L + L S E
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 536 ----LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591
S+ + + +AD ++YL+ + F VH+D++++N ++ ++ + DFG+ +
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 592 LKPESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
+ +++ G +++PE T DV+SFGV++ E A + P LS
Sbjct: 179 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 236
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 444 IGNGGHGSVYRAELPS------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
IG G G V++A P +VA+K D AD F E + E + N
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD---FQREAALMAEFDNPN 111
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSS--------------DTAAQ-------EL 536
IVK G C+ + L++E + G L L S T A+ L
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596
++++ + + VA ++YL F VH+D++++N L+ +ADFG+++ + S
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSRNIY--S 226
Query: 597 SNWTEFAGTYG----YVAPELAYTMKITEKCDVYSFGVLVLE 634
+++ + G ++ PE + + T + DV+++GV++ E
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 268
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
T+++ +G G V R ++P+GQ A K ++ + D ++ E + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR--DHQKLEREARICRLL 60
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
+H NIV+ + S +LV++L+ G L D A+E + + + L
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVARE--YYSEADASHCIQQILE 114
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAGTYGYVA 610
++H IVH+D+ +NLLL + + +ADFG+A ++ + W FAGT GY++
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + D+++ GV++ + G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 32/250 (12%)
Query: 438 FDAQYCIGNGGHGSVYRAE----LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
F+ +G GG+G V++ +G++ A+K + D E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 494 RHRNIVKF-YGFCSHARHSFLVYELLERGSL------AAILSSDTAAQELGWSQRMNVIK 546
+H IV Y F + + +L+ E L G L I DTA L
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFMEDTACFYLA--------- 128
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY 606
++ AL +LH I+++D+ +N++L+ + + DFG+ K + + F GT
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTI 185
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666
Y+APE+ D +S G L+ + + G P + N +D+IL +
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--------FTGENRKKTIDKILKCK 237
Query: 667 LPPPSRSVQE 676
L P QE
Sbjct: 238 LNLPPYLTQE 247
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 26/221 (11%)
Query: 432 VRATNDFDAQYCIGNGGHGSVYRA--ELPS----GQVVAIKKFHSPLPCDQIADQKEFLI 485
R T+D+ +G G V R + P+ +++ KK + D ++
Sbjct: 27 TRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA-------RDHQKLER 79
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL-GWSQRMNV 544
E + ++H NIV+ + S +LV++L+ G L D A+E + +
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVAREYYSEADASHC 135
Query: 545 IKGVADALSYLH-HDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWT 600
I + ++++++H HD IVH+D+ +NLLL + + +ADFG+A ++ E W
Sbjct: 136 IHQILESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF 191
Query: 601 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
FAGT GY++PE+ + D+++ GV++ + G P
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ +Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+ + E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E + T Y APE+
Sbjct: 166 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---YVATRWYRAPEIMLN 219
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 32/250 (12%)
Query: 438 FDAQYCIGNGGHGSVYRAE----LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
F+ +G GG+G V++ +G++ A+K + D E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 494 RHRNIVKF-YGFCSHARHSFLVYELLERGSL------AAILSSDTAAQELGWSQRMNVIK 546
+H IV Y F + + +L+ E L G L I DTA L
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFMEDTACFYLA--------- 128
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY 606
++ AL +LH I+++D+ +N++L+ + + DFG+ K + + F GT
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTI 185
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666
Y+APE+ D +S G L+ + + G P + N +D+IL +
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--------FTGENRKKTIDKILKCK 237
Query: 667 LPPPSRSVQE 676
L P QE
Sbjct: 238 LNLPPYLTQE 247
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 30/247 (12%)
Query: 421 NFEGKLVY--DEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSP 471
+F VY DE A +G G G VY + G V VAIK +
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE- 59
Query: 472 LPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDT 531
+ ++ EFL E + E ++V+ G S + + ++ EL+ RG L + L S
Sbjct: 60 --AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 117
Query: 532 AAQE-------LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVA 584
E S+ + + +AD ++YL+ + F VH+D++++N ++ ++ +
Sbjct: 118 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIG 174
Query: 585 DFGIAKFLKPESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGK 639
DFG+ + + +++ G +++PE T DV+SFGV++ E A +
Sbjct: 175 DFGMTRDIY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
Query: 640 HPRDFLS 646
P LS
Sbjct: 233 QPYQGLS 239
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
T+++ +G G V R ++P+GQ A K ++ + D ++ E + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR--DHQKLEREARICRLL 60
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
+H NIV+ + S +LV++L+ G L D A+E + + + L
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVARE--YYSEADASHCIQQILE 114
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAGTYGYVA 610
++H IVH+D+ +NLLL + + +ADFG+A ++ + W FAGT GY++
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + D+++ GV++ + G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIAD 479
V DE A +G G G VY + G V VAIK + + +
Sbjct: 16 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 71
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE---- 535
+ EFL E + E ++V+ G S + + ++ EL+ RG L + L S A
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 536 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592
S+ + + +AD ++YL+ + F VH+D++++N ++ ++ + DFG+ + +
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 593 KPESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
+++ G +++PE T DV+SFGV++ E A + P LS
Sbjct: 189 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + D+G+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIAD 479
V DE A +G G G VY + G V VAIK + + +
Sbjct: 9 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 64
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE---- 535
+ EFL E + E ++V+ G S + + ++ EL+ RG L + L S E
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 536 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592
S+ + + +AD ++YL+ + F VH+D++++N ++ ++ + DFG+ + +
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 593 KPESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
+++ G +++PE T DV+SFGV++ E A + P LS
Sbjct: 182 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 238
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGXVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIAD 479
V DE A +G G G VY + G V VAIK + + +
Sbjct: 38 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 93
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE---- 535
+ EFL E + E ++V+ G S + + ++ EL+ RG L + L S E
Sbjct: 94 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 153
Query: 536 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592
S+ + + +AD ++YL+ + F VH+D++++N ++ ++ + DFG+ + +
Sbjct: 154 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 210
Query: 593 KPESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
+++ G +++PE T DV+SFGV++ E A + P LS
Sbjct: 211 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 267
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN 543
E++ L + H +IVK+ G C + LV E + GSL L +G +Q +
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGLAQLLL 115
Query: 544 VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA 603
+ + + ++YLH + +H+ ++++N+LLD + + DFG+AK + PE +
Sbjct: 116 FAQQICEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVR 171
Query: 604 ----GTYGYVAPELAYTMKITEKCDVYSFGVLVLEAI------KGKHPRDFLSLISSSSL 653
+ APE K DV+SFGV + E + + H + F LI +
Sbjct: 172 EDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTK-FTELIGHTQG 230
Query: 654 N-TDIALDEILD--PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
T + L E+L+ RLP P R E I + +C RPT +
Sbjct: 231 QMTVLRLTELLERGERLPRPDRCPCE----IYHLMKNCWETEASFRPTFQ 276
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN 543
E++ L + H +IVK+ G C + LV E + GSL L +G +Q +
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGLAQLLL 116
Query: 544 VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA 603
+ + + ++YLH + +H+ ++++N+LLD + + DFG+AK + PE +
Sbjct: 117 FAQQICEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVR 172
Query: 604 ----GTYGYVAPELAYTMKITEKCDVYSFGVLVLEAI------KGKHPRDFLSLISSSSL 653
+ APE K DV+SFGV + E + + H + F LI +
Sbjct: 173 EDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTK-FTELIGHTQG 231
Query: 654 N-TDIALDEILD--PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
T + L E+L+ RLP P R E I + +C RPT +
Sbjct: 232 QMTVLRLTELLERGERLPRPDRCPCE----IYHLMKNCWETEASFRPTFQ 277
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 438 FDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLI-EVKALTEIRH 495
F+ + +G G V AE +G++ A+K +P + ++ + E+ L +I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVK----CIPKKALKGKESSIENEIAVLRKIKH 79
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR--MNVIKGVADALS 553
NIV H +LV +L+ G L D ++ ++++ +I+ V DA+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELF-----DRIVEKGFYTEKDASTLIRQVLDAVY 134
Query: 554 YLHHDCFPPIVHQDISSKNLLL---DLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH IVH+D+ +NLL D E + ++DFG++K ++ + + GT GYVA
Sbjct: 135 YLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGYVA 190
Query: 611 PELAYTMKITEKCDVYSFGVLV 632
PE+ ++ D +S GV+
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIA 212
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 146
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQK---EFLIEVKALTEIRHRNIV 499
+G+G G+VY+ +P G+ V I L ++ K EF+ E + + H ++V
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ G C LV +L+ G L + +G +N +A + YL
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEER- 159
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY--GYVAPELAYTM 617
+VH+D++++N+L+ + DFG+A+ L+ + + G ++A E +
Sbjct: 160 --RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 618 KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILD-----PRLPPPS 671
K T + DV+S+GV + E + G P D I EI D RLP P
Sbjct: 218 KFTHQSDVWSYGVTIWELMTFGGKPYD------------GIPTREIPDLLEKGERLPQPP 265
Query: 672 RSVQEKLISIMEVAFSCLNESPESRPTMK 700
I + V C +SRP K
Sbjct: 266 ICT----IDVYMVMVKCWMIDADSRPKFK 290
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+F IG G +G VY+A +G+VVA+KK + + + E+ L E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 67
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADAL 552
H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
S+ ++H+D+ +NLL++ E +ADFG+A+ +T T Y APE
Sbjct: 128 SHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
Query: 613 LAYTMK-ITEKCDVYSFGVLVLEAI 636
+ K + D++S G + E +
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMV 205
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKF---HSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G +VY+A + + Q+VAIKK H D I + L E+K L E+ H NI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI--NRTALREIKLLQELSHPNII 75
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
H + LV++ +E L I+ ++ L S + L YLH
Sbjct: 76 GLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLV--LTPSHIKAYMLMTLQGLEYLHQHW 132
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKI 619
I+H+D+ NLLLD +ADFG+AK + + T Y APEL + ++
Sbjct: 133 ---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM 189
Query: 620 TE-KCDVYSFGVLVLEAI 636
D+++ G ++ E +
Sbjct: 190 YGVGVDMWAVGCILAELL 207
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G GG V+ A +L + VA+K + L D + F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAVY 78
Query: 503 GFCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
+ ++V E ++ +L I+ ++ + + + VI AL++ H +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN 135
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA---GTYGYVAPELAY 615
I+H+D+ N+++ V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
+ + DVYS G ++ E + G+ P S +S +A + + +PP +R
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-------VAYQHVREDPIPPSAR--H 243
Query: 676 EKLISIME-VAFSCLNESPESR 696
E L + ++ V L ++PE+R
Sbjct: 244 EGLSADLDAVVLKALAKNPENR 265
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 124/287 (43%), Gaps = 33/287 (11%)
Query: 424 GKLVYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQ-- 480
G + I++ T +F +G+G G+VY+ +P G+ V I P+ ++ +
Sbjct: 1 GAMALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATS 54
Query: 481 ----KEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL 536
KE L E + + + ++ + G C + L+ +L+ G L + +
Sbjct: 55 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNI 111
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596
G +N +A+ ++YL +VH+D++++N+L+ + DFG+AK L E
Sbjct: 112 GSQYLLNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 168
Query: 597 SNWTEFAGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSL 653
+ G ++A E T + DV+S+GV V E + G P D I +S +
Sbjct: 169 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEI 225
Query: 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
++ + E RLP P I + + C +SRP +
Sbjct: 226 SSILEKGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 264
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSP--------LPCDQIADQKEFL 484
AT+ ++ IG G +G+VY+A P SG VA+K P LP I+ +E
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLP---ISTVREVA 63
Query: 485 IEVKALTEIRHRNIVKFYGFCSHARHS-----FLVYELLE---RGSLAAILSSDTAAQEL 536
+ ++ L H N+V+ C+ +R LV+E ++ R L A+ +
Sbjct: 64 L-LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596
++++ L +LH +C IVH+D+ +N+L+ +ADFG+A+ +
Sbjct: 123 K-----DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM 174
Query: 597 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGK 639
+ T T Y APE+ D++S G + E + K
Sbjct: 175 A-LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 443 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG G V A + +G+ VA++ + + QK F EV+ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKT-QLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
+ + +LV E G + L + +E + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT- 620
IVH+D+ ++NLLLD + +ADFG + + EF G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 621 EKCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ +L +I + L Y+H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH 138
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 139 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 192
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 42/272 (15%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQK------EFLIEVKALTEIRHR 496
+G+G G+VY+ +P G+ V I P+ + + EF+ E + + H
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKI-----PVAIKILNETTGPKANVEFMDEALIMASMDHP 77
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
++V+ G C LV +L+ G L + +G +N +A + YL
Sbjct: 78 HLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMYLE 134
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY--GYVAPELA 614
+VH+D++++N+L+ + DFG+A+ L+ + + G ++A E
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 615 YTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILD-----PRLP 668
+ K T + DV+S+GV + E + G P D I EI D RLP
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD------------GIPTREIPDLLEKGERLP 239
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
P I + V C +SRP K
Sbjct: 240 QPPICT----IDVYMVMVKCWMIDADSRPKFK 267
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T Y APE+
Sbjct: 163 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---XVATRWYRAPEIMLN 216
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIAD 479
V DE A +G G G VY + G V VAIK + + +
Sbjct: 6 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 61
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE---- 535
+ EFL E + E ++V+ G S + + ++ EL+ RG L + L S A
Sbjct: 62 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 536 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592
S+ + + +AD ++YL+ + F VH+D++++N ++ ++ + DFG+ + +
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
Query: 593 KPESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
+++ G +++PE T DV+SFGV++ E A + P LS
Sbjct: 179 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 235
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 75
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 76 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 130
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 131 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 188
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 189 STAVDIWSLGCIFAEMV 205
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 444 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPCDQIADQKEFL-IEVKALTEIRHR 496
+G GG Y E+ +G+VV P QKE + E+ + +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKP-------HQKEKMSTEIAIHKSLDNP 86
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
++V F+GF ++V E+ R SL + A E + ++ + YLH
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---PEARYFMRQTIQGVQYLH 143
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
++ ++H+D+ NL L+ + + + DFG+A ++ + + GT Y+APE+
Sbjct: 144 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 617 MKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G ++ + GK P
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF-LKPESSNWTEFAGTYGYV 609
AL+YLH I+++D+ N+LLD E + D+G+ K L+P + T F GT Y+
Sbjct: 165 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYI 220
Query: 610 APELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLP 668
APE+ D ++ GVL+ E + G+ P D + + NT D IL+ ++
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
P RS+ K S+++ S LN+ P+ R
Sbjct: 281 IP-RSLSVKAASVLK---SFLNKDPKER 304
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 444 IGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN---IV 499
IG G +GSV + PSGQ++A+K+ S + D+ +QK+ L+++ + +R + IV
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DE-KEQKQLLMDLDVV--MRSSDCPYIV 84
Query: 500 KFYGFCSHARHSFLVYELLERG------SLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
+FYG ++ EL+ + ++L + LG + AL+
Sbjct: 85 QFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-----KITLATVKALN 139
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
+L + I+H+DI N+LLD + DFGI+ L +S T AG Y+APE
Sbjct: 140 HLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMAPER 196
Query: 614 ----AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
A + DV+S G+ + E G+ P
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 28/239 (11%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPCDQIAD 479
V DE A +G G G VY + G V VAIK + + +
Sbjct: 3 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 58
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE---- 535
+ EFL E + E ++V+ G S + + ++ EL+ RG L + L S E
Sbjct: 59 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 536 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592
S+ + + +AD ++YL+ + F VH+D++++N + ++ + DFG+ + +
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDI 175
Query: 593 KPESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLS 646
+++ G +++PE T DV+SFGV++ E A + P LS
Sbjct: 176 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+F IG G +G VY+A +G+VVA+KK + + + E+ L E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADAL 552
H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
S+ ++H+D+ +NLL++ E +ADFG+A+ +T T Y APE
Sbjct: 121 SHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 613 LAYTMK-ITEKCDVYSFGVLVLEAI 636
+ K + D++S G + E +
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMV 198
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 142
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 72
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 73 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 127
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 128 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 186 STAVDIWSLGCIFAEMV 202
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKF 501
+G G +G V+++ + +G+VVA+KK D + E+ LTE+ H NIV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 502 YGF--CSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
+ R +LV++ +E A I A L + V+ + + YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVI-----RANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAK-FLK--------PESSN------------ 598
++H+D+ N+LL+ E VADFG+++ F+ P S N
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 599 WTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLVLEAIKGK 639
T++ T Y APE+ + K T+ D++S G ++ E + GK
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 142
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ +T T Y A
Sbjct: 120 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 172
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 71
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 128
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 238
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 239 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 269
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G GG V+ A +L + VA+K + L D + F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAVY 78
Query: 503 GFCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
+ ++V E ++ +L I+ ++ + + + VI AL++ H +
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN 135
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA---GTYGYVAPELAY 615
I+H+D+ N+++ V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
+ + DVYS G ++ E + G+ P S +S +A + + +PP +R
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-------VAYQHVREDPIPPSAR--H 243
Query: 676 EKLISIME-VAFSCLNESPESR 696
E L + ++ V L ++PE+R
Sbjct: 244 EGLSADLDAVVLKALAKNPENR 265
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 95
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 150
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 151 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 248
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 142
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DF +A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 89
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 144
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 123
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 182 STAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 181 STAVDIWSLGCIFAEMV 197
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 72
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 129
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 239
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 240 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 270
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 181 STAVDIWSLGCIFAEMV 197
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 70
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 127
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 237
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 238 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 268
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 142
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 73
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 130
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 131 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 240
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 241 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 271
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 123
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 182 STAVDIWSLGCIFAEMV 198
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G LS+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG----LSFCHSHR- 123
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 182 STAVDIWSLGCIFAEMV 198
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 142
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 70
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQI 127
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 237
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 238 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 268
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 69
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 126
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 236
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 237 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 267
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 443 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG G V A + +G+ VAIK + + QK F EV+ + + H NIVK
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKT-QLNPTSLQKLFR-EVRIMKILNHPNIVKL 76
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
+ + +L+ E G + L + +E + + + + A+ Y H
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSAVQYCHQ---K 130
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT- 620
IVH+D+ ++NLLLD + +ADFG + F G+ Y APEL K
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPPYAAPELFQGKKYDG 189
Query: 621 EKCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + G P D
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 146
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 437 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
++ Q IG G V A + +G+ VA+K + + QK F EV+ + + H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKII-DKTQLNPTSLQKLFR-EVRIMKILNH 73
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
NIVK + + +LV E G + L + +E + + + A+ Y
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYC 130
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
H IVH+D+ ++NLLLD + +ADFG + + F G+ Y APEL
Sbjct: 131 HQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGSPPYAAPELFQ 186
Query: 616 TMKIT-EKCDVYSFGVLVLEAIKGKHPRD 643
K + DV+S GV++ + G P D
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF-LKPESSNWTEFAGTYGYV 609
AL+YLH I+++D+ N+LLD E + D+G+ K L+P + + F GT Y+
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYI 188
Query: 610 APELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLP 668
APE+ D ++ GVL+ E + G+ P D + + NT D IL+ ++
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 248
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
P RS+ K S+++ S LN+ P+ R
Sbjct: 249 IP-RSMSVKAASVLK---SFLNKDPKER 272
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 76
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 133
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 243
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 244 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 274
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 162
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 163 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF-LKPESSNWTEFAGTYGYV 609
AL+YLH I+++D+ N+LLD E + D+G+ K L+P + + F GT Y+
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYI 177
Query: 610 APELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLP 668
APE+ D ++ GVL+ E + G+ P D + + NT D IL+ ++
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 237
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
P RS+ K S+++ S LN+ P+ R
Sbjct: 238 IP-RSLSVKAASVLK---SFLNKDPKER 261
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 444 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPCDQIADQKEFL-IEVKALTEIRHR 496
+G GG Y E+ +G+VV P QKE + E+ + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKP-------HQKEKMSTEIAIHKSLDNP 102
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM-NVIKGVADALSYL 555
++V F+GF ++V E+ R SL + A E M I+GV YL
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV----QYL 158
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
H++ ++H+D+ NL L+ + + + DFG+A ++ + + GT Y+APE+
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 215
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G ++ + GK P
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 71
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 128
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 238
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 239 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 269
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 69
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQI 126
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 236
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 237 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 267
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 144
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 72
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 129
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 239
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 240 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 270
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 144
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 443 CIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE-------IR 494
+G+G G+V++ +P G+ + I P+ C ++ + K +A+T+ +
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKI-----PV-CIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
H +IV+ G C + LV + L GSL + A LG +N +A + Y
Sbjct: 92 HAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYY 148
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPE 612
L +VH++++++N+LL + VADFG+A L P+ ++E ++A E
Sbjct: 149 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSL 653
+ K T + DV+S+GV V E + G P L L L
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL 247
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 94
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 151
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 152 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 208
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 261
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 262 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 292
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 72
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 129
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 239
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 240 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 270
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 69
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 126
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 236
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 237 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 267
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 75
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 132
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 133 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 242
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 243 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 273
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 147
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 148 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 148
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 149 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 246
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 139
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 140 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 237
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 146
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF-LKPESSNWTEFAGTYGYV 609
AL+YLH I+++D+ N+LLD E + D+G+ K L+P + + F GT Y+
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYI 173
Query: 610 APELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT-DIALDEILDPRLP 668
APE+ D ++ GVL+ E + G+ P D + + NT D IL+ ++
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 233
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
P RS+ K S+++ S LN+ P+ R
Sbjct: 234 IP-RSLSVKAASVLK---SFLNKDPKER 257
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 438 FDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPCDQIADQKEFLIE--VKALTEIR 494
+D + +G G V AE Q +VAIK + + KE +E + L +I+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-----AKEALEGKEGSMENEIAVLHKIK 74
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR--MNVIKGVADAL 552
H NIV H +L+ +L+ G L D ++ +++R +I V DA+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIFQVLDAV 129
Query: 553 SYLHHDCFPPIVHQDISSKNLL---LDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYV 609
YLH IVH+D+ +NLL LD + + ++DFG++K P S + GT GYV
Sbjct: 130 KYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYV 185
Query: 610 APELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
APE+ ++ D +S GV+ + G P
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G GG V+ A +L + VA+K + L D + F E + + H IV Y
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAVY 95
Query: 503 GFCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
+ ++V E ++ +L I+ ++ + + + VI AL++ H +
Sbjct: 96 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN 152
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA---GTYGYVAPELAY 615
I+H+D+ N+++ V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 153 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
+ + DVYS G ++ E + G+ P S +S +A + + +PP +R
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-------VAYQHVREDPIPPSAR--H 260
Query: 676 EKLISIME-VAFSCLNESPESR 696
E L + ++ V L ++PE+R
Sbjct: 261 EGLSADLDAVVLKALAKNPENR 282
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G GG V+ A +L + VA+K + L D + F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAVY 78
Query: 503 GFCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
+ ++V E ++ +L I+ ++ + + + VI AL++ H +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN 135
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA---GTYGYVAPELAY 615
I+H+D+ N+++ V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
+ + DVYS G ++ E + G+ P S +S +A + + +PP +R
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-------VAYQHVREDPIPPSAR--H 243
Query: 676 EKLISIME-VAFSCLNESPESR 696
E L + ++ V L ++PE+R
Sbjct: 244 EGLSADLDAVVLKALAKNPENR 265
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 140
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 141 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 140
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 141 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 25/262 (9%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G GG V+ A +L + VA+K + L D + F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAVY 78
Query: 503 GFCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
+ ++V E ++ +L I+ ++ + + + VI AL++ H +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN 135
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA---GTYGYVAPELAY 615
I+H+D+ N+L+ V DFGIA+ + ++ + A GT Y++PE A
Sbjct: 136 G---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
+ + DVYS G ++ E + G+ P S +S +A + + +PP +R
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-------VAYQHVREDPIPPSAR--H 243
Query: 676 EKLISIME-VAFSCLNESPESR 696
E L + ++ V L ++PE+R
Sbjct: 244 EGLSADLDAVVLKALAKNPENR 265
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 443 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG G V A + +G+ VA+K + + QK F EV+ + + H NIVK
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFR-EVRIMKVLNHPNIVKL 71
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNV---IKGVADALSYLHHD 558
+ + +LV E G + L + GW + + + A+ Y H
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAH------GWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK 618
IVH+D+ ++NLLLD + +ADFG + + F G+ Y APEL K
Sbjct: 126 F---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 619 IT-EKCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + G P D
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSP-----LPCDQIADQKEFLIEV 487
AT+ ++ IG G +G+VY+A P SG VA+K P LP I+ +E + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP---ISTVREVAL-L 57
Query: 488 KALTEIRHRNIVKFYGFCSHARHS-----FLVYELLE---RGSLAAILSSDTAAQELGWS 539
+ L H N+V+ C+ +R LV+E ++ R L A+ +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK-- 115
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599
++++ L +LH +C IVH+D+ +N+L+ +ADFG+A+ + + +
Sbjct: 116 ---DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF 169
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGK 639
T Y APE+ D++S G + E + K
Sbjct: 170 PVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 479 DQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL-G 537
D ++ E + ++H NIV+ + S H +L+++L+ G L D A+E
Sbjct: 64 DHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYS 119
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKP 594
+ + I+ + +A+ + H +VH+D+ +NLLL + + +ADFG+A ++
Sbjct: 120 EADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG 176
Query: 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E W FAGT GY++PE+ + D+++ GV++ + G P
Sbjct: 177 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL ++ D+++ G ++ + + G P F + I L+
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 256 KFFPKARDLVEKLLVL 271
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 438 FDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPCDQIADQKEFLIE--VKALTEIR 494
+D + +G G V AE Q +VAIK + + KE +E + L +I+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-----AKKALEGKEGSMENEIAVLHKIK 74
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR--MNVIKGVADAL 552
H NIV H +L+ +L+ G L D ++ +++R +I V DA+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIFQVLDAV 129
Query: 553 SYLHHDCFPPIVHQDISSKNLL---LDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYV 609
YLH IVH+D+ +NLL LD + + ++DFG++K P S + GT GYV
Sbjct: 130 KYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYV 185
Query: 610 APELAYTMKITEKCDVYSFGVLV 632
APE+ ++ D +S GV+
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIA 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 443 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG G V A + +G+ VAIK + + QK F EV+ + + H NIVK
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIKIIDKT-QLNPTSLQKLFR-EVRIMKILNHPNIVKL 79
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
+ + +L+ E G + L + +E + + + + A+ Y H
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSAVQYCHQ---K 133
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT- 620
IVH+D+ ++NLLLD + +ADFG + F G Y APEL K
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 621 EKCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + G P D
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSP-----LPCDQIADQKEFLIEV 487
AT+ ++ IG G +G+VY+A P SG VA+K P LP I+ +E + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP---ISTVREVAL-L 57
Query: 488 KALTEIRHRNIVKFYGFCSHARHS-----FLVYELLE---RGSLAAILSSDTAAQELGWS 539
+ L H N+V+ C+ +R LV+E ++ R L A+ +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK-- 115
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599
++++ L +LH +C IVH+D+ +N+L+ +ADFG+A+ + +
Sbjct: 116 ---DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-L 168
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGK 639
T Y APE+ D++S G + E + K
Sbjct: 169 APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 25/262 (9%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G GG V+ A +L + VA+K + L D + F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAVY 78
Query: 503 GFCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
+ ++V E ++ +L I+ ++ + + + VI AL++ H +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN 135
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA---GTYGYVAPELAY 615
I+H+D+ N+++ V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
+ + DVYS G ++ E + G+ P + S ++ +A + + +PP +R
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP------FTGDSPDS-VAYQHVREDPIPPSAR--H 243
Query: 676 EKLISIME-VAFSCLNESPESR 696
E L + ++ V L ++PE+R
Sbjct: 244 EGLSADLDAVVLKALAKNPENR 265
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLK----CQHLSNDHICYFLYQILRGLKYIHS 146
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 33/213 (15%)
Query: 445 GNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGF 504
G G V++A+L + VA+K F PL D+ + Q E E+ + ++H N+++F
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIF--PLQ-DKQSWQSER--EIFSTPGMKHENLLQF--I 75
Query: 505 CSHARHSFLVYELL------ERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
+ R S L EL ++GSL L + + W++ +V + ++ LSYLH D
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHED 131
Query: 559 C--------FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGTYGY 608
P I H+D SKN+LL + A +ADFG+A +P + GT Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 609 VAPE-----LAYTMKITEKCDVYSFGVLVLEAI 636
+APE + + + D+Y+ G+++ E +
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQ------KEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 69
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 126
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 236
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 237 RLPQPPICT----IDVYMIMRKCWMIDADSRPKFR 267
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 438 FDAQYCIGNGGHGSVY---RAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
F+ +G G G V+ + P SG + A+K ++ D+ +E L ++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKA--TLKVRDRVRTKMERDILADV 87
Query: 494 RHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
H +VK Y F + + +L+ + L G L LS + E + +A L
Sbjct: 88 NHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELALGL 143
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
+LH I+++D+ +N+LLD E + DFG++K F GT Y+APE
Sbjct: 144 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE 200
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D +S+GVL+ E + G P
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + FG+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQ------KEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 63
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 120
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 121 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 230
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 231 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 261
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 443 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG G V A + +G+ VA+K + + QK F EV+ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
+ + +LV E G + L + +E + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT- 620
IVH+D+ ++NLLLD + +ADFG + + F G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 621 EKCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 443 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG G V A + +G+ VA+K + + QK F EV+ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
+ + +LV E G + L + +E + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT- 620
IVH+D+ ++NLLLD + +ADFG + + F G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 621 EKCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 438 FDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPCDQIADQKEFLIE--VKALTEIR 494
+D + +G G V AE Q +VAIK + + KE +E + L +I+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-----AKEALEGKEGSMENEIAVLHKIK 74
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR--MNVIKGVADAL 552
H NIV H +L+ +L+ G L D ++ +++R +I V DA+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIFQVLDAV 129
Query: 553 SYLHHDCFPPIVHQDISSKNLL---LDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYV 609
YLH IVH+D+ +NLL LD + + ++DFG++K P S + GT GYV
Sbjct: 130 KYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYV 185
Query: 610 APELAYTMKITEKCDVYSFGVLV 632
APE+ ++ D +S GV+
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIA 208
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 438 FDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPCDQIADQKEFLIE--VKALTEIR 494
+D + +G G V AE Q +VAIK + + KE +E + L +I+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-----AKEALEGKEGSMENEIAVLHKIK 74
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR--MNVIKGVADAL 552
H NIV H +L+ +L+ G L D ++ +++R +I V DA+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIFQVLDAV 129
Query: 553 SYLHHDCFPPIVHQDISSKNLL---LDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYV 609
YLH IVH+D+ +NLL LD + + ++DFG++K P S + GT GYV
Sbjct: 130 KYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYV 185
Query: 610 APELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
APE+ ++ D +S GV+ + G P
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 443 CIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE-------IR 494
+G+G G+V++ +P G+ + I P+ C ++ + K +A+T+ +
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKI-----PV-CIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
H +IV+ G C + LV + L GSL + A LG +N +A + Y
Sbjct: 74 HAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYY 130
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPE 612
L +VH++++++N+LL + VADFG+A L P+ ++E ++A E
Sbjct: 131 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSL 653
+ K T + DV+S+GV V E + G P L L L
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL 229
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + D G+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ +LV L+ A L Q L + + L Y+H
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLM-----GADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 163 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 72
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 129
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 239
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 240 RLPQPPICT----IDVYMIMRKCWMIDADSRPKFR 270
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSP-----LPCDQIADQKEFLIEV 487
AT+ ++ IG G +G+VY+A P SG VA+K P LP I+ +E + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP---ISTVREVAL-L 57
Query: 488 KALTEIRHRNIVKFYGFCSHARHS-----FLVYELLERGSLAAILSSDTAAQELGWSQRM 542
+ L H N+V+ C+ +R LV+E +++ L L L
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDK-APPPGLPAETIK 115
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++++ L +LH +C IVH+D+ +N+L+ +ADFG+A+ + +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPV 171
Query: 603 AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGK 639
T Y APE+ D++S G + E + K
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + D G+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQ------KEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIMELREATSPKANKEILDEAY 103
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 160
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 161 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 217
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 270
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 271 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 301
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 52/269 (19%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
DF +G G +V A EL + + AIK I +++ + E K R
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIK----------ILEKRHIIKENKVPYVTR 86
Query: 495 HRNI---------VKFYGFC-----------SHARHSFLVYELLERGSLAAILSSDTAAQ 534
R++ VK Y FC S+A++ L+ + + GS + A+
Sbjct: 87 ERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 145
Query: 535 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L P
Sbjct: 146 -------------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 189
Query: 595 ES--SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS 652
ES + F GT YV+PEL + D+++ G ++ + + G P F +
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLI 247
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISI 681
I L+ + P +R + EKL+ +
Sbjct: 248 FQKIIKLEYDFPEKFFPKARDLVEKLLVL 276
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 36/261 (13%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
DF +G G +V A EL + + AIK I +++ + E K R
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIK----------ILEKRHIIKENKVPYVTR 58
Query: 495 HRNIVKFYGFCSHARHSFLV---YELLERGSLAAILSSDTAAQELGWSQRMN-------- 543
R+++ S H F V + + L LS + L + +++
Sbjct: 59 ERDVM------SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR 112
Query: 544 -VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWT 600
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES +
Sbjct: 113 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
Query: 601 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660
F GT YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLE 227
Query: 661 EILDPRLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 228 YDFPEKFFPKARDLVEKLLVL 248
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAI+K P + + L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 146
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + TE+ T Y APE+
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 36/261 (13%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
DF +G G +V A EL + + AIK I +++ + E K R
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIK----------ILEKRHIIKENKVPYVTR 59
Query: 495 HRNIVKFYGFCSHARHSFLV---YELLERGSLAAILSSDTAAQELGWSQRMN-------- 543
R+++ S H F V + + L LS + L + +++
Sbjct: 60 ERDVM------SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR 113
Query: 544 -VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWT 600
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES +
Sbjct: 114 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 170
Query: 601 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660
F GT YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLE 228
Query: 661 EILDPRLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 229 YDFPEKFFPKARDLVEKLLVL 249
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 444 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPCDQIADQKEFL-IEVKALTEIRHR 496
+G GG Y E+ +G+VV P QKE + E+ + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKP-------HQKEKMSTEIAIHKSLDNP 102
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM-NVIKGVADALSYL 555
++V F+GF ++V E+ R SL + A E M I+GV YL
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV----QYL 158
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
H++ ++H+D+ NL L+ + + + DFG+A ++ + GT Y+APE+
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC 215
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G ++ + GK P
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 115/286 (40%), Gaps = 47/286 (16%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQK--EFLIEVKALTEIRHRNIVKF 501
+G G GSV L ++K + D + ++ EFL E + + H N+++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 502 YGFCSHARHS-----FLVYELLERGSLAAIL---SSDTAAQELGWSQRMNVIKGVADALS 553
G C ++ ++ G L L +T + + + + +A +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY------- 606
YL + F +H+D++++N +L + VADFG++K + ++G Y
Sbjct: 162 YLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSKKI---------YSGDYYRQGRIA 209
Query: 607 ----GYVAPELAYTMKITEKCDVYSFGVLVLE-AIKGKHPRDFLSLISSSSLNTDIALDE 661
++A E T K DV++FGV + E A +G P + D
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP--------YPGVQNHEMYDY 261
Query: 662 ILD-PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
+L RL P + E + E+ +SC P RPT V+ Q+
Sbjct: 262 LLHGHRLKQPEDCLDE----LYEIMYSCWRTDPLDRPTFSVLRLQL 303
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 79
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 136
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 137 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 246
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 247 RLPQPPICT----IDVYMIMRKCWMIDADSRPKFR 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 444 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPCDQIADQKEFL-IEVKALTEIRHR 496
+G GG Y E+ +G+VV P QKE + E+ + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKP-------HQKEKMSTEIAIHKSLDNP 102
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM-NVIKGVADALSYL 555
++V F+GF ++V E+ R SL + A E M I+GV YL
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV----QYL 158
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
H++ ++H+D+ NL L+ + + + DFG+A ++ + GT Y+APE+
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLC 215
Query: 616 TMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G ++ + GK P
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 119/282 (42%), Gaps = 33/282 (11%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G +VA+K+ P DQ Q++F E++ L + I
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQ---QRDFQREIQILKALHSDFI 73
Query: 499 VKFYGFC-SHARHSF-LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL- 555
VK+ G R S LV E L G L L A L S+ + + + YL
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 131
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT---EFAGTYGYVAPE 612
C VH+D++++N+L++ E +ADFG+AK L + + + APE
Sbjct: 132 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 187
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKHPR-DFLSLISSSS---LNTDIALDEILD 664
+ + DV+SFGV++ E K P +FL ++ S + +
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEG 247
Query: 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
RLP P E + E+ C SP+ RP+ + Q+
Sbjct: 248 QRLPAPPACPAE----VHELMKLCWAPSPQDRPSFSALGPQL 285
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 36/261 (13%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
DF +G G +V A EL + + AIK I +++ + E K R
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIK----------ILEKRHIIKENKVPYVTR 56
Query: 495 HRNIVKFYGFCSHARHSFLV---YELLERGSLAAILSSDTAAQELGWSQRMN-------- 543
R+++ S H F V + + L LS + L + +++
Sbjct: 57 ERDVM------SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR 110
Query: 544 -VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWT 600
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES +
Sbjct: 111 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
Query: 601 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660
F GT YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLE 225
Query: 661 EILDPRLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 226 YDFPEKFFPKARDLVEKLLVL 246
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 12/161 (7%)
Query: 486 EVKALTEIRHRNIVKFYGFCS--HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN 543
E+ L ++ H N+VK + H ++V+EL+ +G + + + +++ +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQD 145
Query: 544 VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA 603
+IKG+ YLH + I+H+DI NLL+ + +ADFG++ K + +
Sbjct: 146 LIKGI----EYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV 198
Query: 604 GTYGYVAPE-LAYTMKI--TEKCDVYSFGVLVLEAIKGKHP 641
GT ++APE L+ T KI + DV++ GV + + G+ P
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + +G VA+KK P I K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ AR +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + D G+A+ E T + T Y APE+
Sbjct: 143 S---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM---TGYVATRWYRAPEIMLN 196
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 443 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG G V A + +G+ VA+K + + QK F EV+ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
+ + +LV E G + L + +E + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT- 620
IVH+D+ ++NLLLD + +ADFG + + F G Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 621 EKCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 256
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 257 KFFPKARDLVEKLLVL 272
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 256
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 257 KFFPKARDLVEKLLVL 272
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 36/261 (13%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
DF +G G +V A EL + + AIK I +++ + E K R
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIK----------ILEKRHIIKENKVPYVTR 57
Query: 495 HRNIVKFYGFCSHARHSFLV---YELLERGSLAAILSSDTAAQELGWSQRMN-------- 543
R+++ S H F V + + L LS + L + +++
Sbjct: 58 ERDVM------SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR 111
Query: 544 -VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWT 600
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES +
Sbjct: 112 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
Query: 601 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660
F GT YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLE 226
Query: 661 EILDPRLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 227 YDFPEKFFPKARDLVEKLLVL 247
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 256 KFFPKARDLVEKLLVL 271
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP--FRAGNEGLIFAKIIKLEYDFPE 255
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 256 KFFPKARDLVEKLLVL 271
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 256 KFFPKARDLVEKLLVL 271
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 62
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 123 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 175
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 254 KFFPKARDLVEKLLVL 269
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 434 ATNDFDAQY-------CIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKE 482
+T D++ Q CIG G G V++ S VAIK + C + +++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREK 57
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
FL E + + H +IVK G + +++ EL G L + L + +L + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--ASLI 114
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++ AL+YL F VH+DI+++N+L+ + DFG++++++ +S+ +
Sbjct: 115 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKAS 170
Query: 603 AGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
G ++APE + T DV+ FGV + E +
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEGLIFAKIIKLEYDFPE 255
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 256 KFFPKARDLVEKLLVL 271
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 121 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 71
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 128
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG AK L E + G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 238
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 239 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 269
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 254 KFFPKARDLVEKLLVL 269
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 254 KFFPKARDLVEKLLVL 269
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 256 KFFPKARDLVEKLLVL 271
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 441 QYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIV 499
QY IG G +G V A + VAIKK P + + L E++ L RH N++
Sbjct: 49 QY-IGEGAYGMVSSAYDHVRKTRVAIKKIS---PFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 500 KFYGFCSHA-----RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ R ++V +L+E L +L S Q+L + + L Y
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLME-TDLYKLLKS----QQLSNDHICYFLYQILRGLKY 159
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAP 611
+H ++H+D+ NLL++ + + DFG+A+ PE + TE T Y AP
Sbjct: 160 IHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 612 ELAYTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
E+ K T+ D++S G ++ E + GKH D L+ I
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 443 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG G V A + +G+ VA++ + + QK F EV+ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKT-QLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
+ + +LV E G + L + +E + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT- 620
IVH+D+ ++NLLLD + +ADFG + + F G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 621 EKCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 121 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 43/269 (15%)
Query: 398 KRKSDSGDRQSSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAEL 457
K+K G R + +I NFE L N ++ +G G G+V
Sbjct: 3 KKKRKRGSRGGKKGRKSRIANIPNFEQSL--------KNLVVSEKILGYGSSGTVVFQGS 54
Query: 458 PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFLVYE 516
G+ VA+K+ CD IA L+E+K LTE H N++++Y + R ++ E
Sbjct: 55 FQGRPVAVKRMLIDF-CD-IA-----LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 107
Query: 517 LLERGSLAAILSSDTAAQELGWSQRMN---VIKGVADALSYLHHDCFPPIVHQDISSKNL 573
L + S + + + L + N +++ +A +++LH I+H+D+ +N+
Sbjct: 108 LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNI 164
Query: 574 LL--------DLEYEAH-----VADFGIAKFLKPES----SNWTEFAGTYGYVAPEL--- 613
L+ D + A ++DFG+ K L N +GT G+ APEL
Sbjct: 165 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEE 224
Query: 614 AYTMKITEKCDVYSFGVLVLEAI-KGKHP 641
+ ++T D++S G + + KGKHP
Sbjct: 225 STKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 252
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 253 KFFPKARDLVEKLLVL 268
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 254 KFFPKARDLVEKLLVL 269
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 73
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 130
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG AK L E + G
Sbjct: 131 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 240
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 241 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 271
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 438 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
F+ + +G G VYR + Q K ++ + D+K E+ L + H N
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQ-----KPYALKVLKKTVDKKIVRTEIGVLLRLSHPN 109
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR--MNVIKGVADALSYL 555
I+K LV EL+ G L D ++ +S+R + +K + +A++YL
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELF-----DRIVEKGYYSERDAADAVKQILEAVAYL 164
Query: 556 HHDCFPPIVHQDISSKNLLLDL---EYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
H + IVH+D+ +NLL + +ADFG++K ++ + T GT GY APE
Sbjct: 165 HENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYCAPE 220
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + D++S G++ + G P
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 252
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 253 KFFPKARDLVEKLLVL 268
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 434 ATNDFDAQY-------CIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKE 482
+T D++ Q CIG G G V++ S VAIK + C + +++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREK 57
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
FL E + + H +IVK G + +++ EL G L + L + +L + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 114
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++ AL+YL F VH+DI+++N+L+ + DFG++++++ +S+ +
Sbjct: 115 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 170
Query: 603 AGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
G ++APE + T DV+ FGV + E +
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 434 ATNDFDAQY-------CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPCDQIADQKE 482
+T D++ Q CIG G G V++ S + VAIK + C + +++
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREK 85
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
FL E + + H +IVK G + +++ EL G L + L + +L + +
Sbjct: 86 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 142
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++ AL+YL F VH+DI+++N+L+ + DFG++++++ +S+ +
Sbjct: 143 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 198
Query: 603 AGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
G ++APE + T DV+ FGV + E +
Sbjct: 199 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 76
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 133
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG AK L E + G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 243
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 244 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 274
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V + + + Q A+K + ++ D L EV+ L ++ H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTILREVELLKKLDHPNIMKLF 87
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+ ++V EL G L + +IK V ++Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 563 IVHQDISSKNLLLD---LEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKI 619
IVH+D+ +N+LL+ + + + DFG++ + +++ + GT Y+APE+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRGT-Y 199
Query: 620 TEKCDVYSFGVLVLEAIKGKHP 641
EKCDV+S GV++ + G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 237
Query: 666 RLPPPSRSVQEKLISI 681
+ P +R + EKL+ +
Sbjct: 238 KFFPKARDLVEKLLVL 253
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 434 ATNDFDAQY-------CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPCDQIADQKE 482
+T D++ Q CIG G G V++ S + VAIK + C + +++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREK 57
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
FL E + + H +IVK G + +++ EL G L + L + +L + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 114
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++ AL+YL F VH+DI+++N+L+ + DFG++++++ +S+ +
Sbjct: 115 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 170
Query: 603 AGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
G ++APE + T DV+ FGV + E +
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 121 CHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 120 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 119 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 108/245 (44%), Gaps = 19/245 (7%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIK--KFHSPLPCDQIADQKEFLIEVKALTE 492
N+F+ +G G G V E +G+ A+K K + D++A L E + L
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQN 204
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E R +
Sbjct: 205 SRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE----DRARFYGAEIVS 259
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH + +V++D+ +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 260 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P F + L I ++EI PR L P
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQ-DHEKLFELILMEEIRFPRTLGP 374
Query: 670 PSRSV 674
++S+
Sbjct: 375 EAKSL 379
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 119 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 43/269 (15%)
Query: 398 KRKSDSGDRQSSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAEL 457
K+K G R + +I NFE L N ++ +G G G+V
Sbjct: 3 KKKRKRGSRGGKKGRKSRIANIPNFEQSL--------KNLVVSEKILGYGSSGTVVFQGS 54
Query: 458 PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFLVYE 516
G+ VA+K+ CD IA L+E+K LTE H N++++Y + R ++ E
Sbjct: 55 FQGRPVAVKRMLIDF-CD-IA-----LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 107
Query: 517 LLERGSLAAILSSDTAAQELGWSQRMN---VIKGVADALSYLHHDCFPPIVHQDISSKNL 573
L + S + + + L + N +++ +A +++LH I+H+D+ +N+
Sbjct: 108 LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNI 164
Query: 574 LL--------DLEYEAH-----VADFGIAKFLKPES----SNWTEFAGTYGYVAPEL--- 613
L+ D + A ++DFG+ K L N +GT G+ APEL
Sbjct: 165 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEE 224
Query: 614 AYTMKITEKCDVYSFGVLVLEAI-KGKHP 641
+ ++T D++S G + + KGKHP
Sbjct: 225 STKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 119 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 69
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 126
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG AK L E + G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 236
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 237 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 267
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 120 CHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ + T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 181 STAVDIWSLGCIFAEMV 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ + T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 181 STAVDIWSLGCIFAEMV 197
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+ K + + + E+ L E+ H NIVK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 123
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 182 STAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+ K + + + E+ L E+ H NIVK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 181 STAVDIWSLGCIFAEMV 197
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
T+++ IG G V R +L +G A K ++ + D ++ E + +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR--DHQKLEREARICRLL 60
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL-GWSQRMNVIKGVADAL 552
+H NIV+ + S +LV++L+ G L D A+E + + I+ + +A+
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAV 116
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAGTYGYV 609
+ H +VH+D+ +NLLL + + +ADFG+A ++ + W FAGT GY+
Sbjct: 117 LHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 610 APELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+PE+ + D+++ GV++ + G P
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 106/245 (43%), Gaps = 19/245 (7%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIK--KFHSPLPCDQIADQKEFLIEVKALTE 492
N+F+ +G G G V E +G+ A+K K + D++A L E + L
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQN 207
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E R +
Sbjct: 208 SRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE----DRARFYGAEIVS 262
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH + +V++D+ +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 263 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 320
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P L I ++EI PR L P
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLFELILMEEIRFPRTLGP 377
Query: 670 PSRSV 674
++S+
Sbjct: 378 EAKSL 382
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 124
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ + T Y APE+ K
Sbjct: 125 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 183 STAVDIWSLGCIFAEMV 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E L + + +S L S +++G+A S+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 123
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ + T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 182 STAVDIWSLGCIFAEMV 198
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G VY+A +G+VVA+KK + + + E+ L E+ H NIVK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVADALSYLHHDCF 560
+LV+E + + + +S L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-I 619
++H+D+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 620 TEKCDVYSFGVLVLEAI 636
+ D++S G + E +
Sbjct: 181 STAVDIWSLGCIFAEMV 197
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 434 ATNDFDAQY-------CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPCDQIADQKE 482
+T D++ Q CIG G G V++ S + VAIK + C + +++
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREK 62
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
FL E + + H +IVK G + +++ EL G L + L + +L + +
Sbjct: 63 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 119
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++ AL+YL F VH+DI+++N+L+ + DFG++++++ +S+ +
Sbjct: 120 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 175
Query: 603 AGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
G ++APE + T DV+ FGV + E +
Sbjct: 176 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 434 ATNDFDAQY-------CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPCDQIADQKE 482
+T D++ Q CIG G G V++ S + VAIK + C + +++
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREK 60
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
FL E + + H +IVK G + +++ EL G L + L + +L + +
Sbjct: 61 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 117
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++ AL+YL F VH+DI+++N+L+ + DFG++++++ +S+ +
Sbjct: 118 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 173
Query: 603 AGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
G ++APE + T DV+ FGV + E +
Sbjct: 174 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 434 ATNDFDAQY-------CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPCDQIADQKE 482
+T D++ Q CIG G G V++ S + VAIK + C + +++
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREK 59
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
FL E + + H +IVK G + +++ EL G L + L + +L + +
Sbjct: 60 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 116
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++ AL+YL F VH+DI+++N+L+ + DFG++++++ +S+ +
Sbjct: 117 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 172
Query: 603 AGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
G ++APE + T DV+ FGV + E +
Sbjct: 173 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 111/257 (43%), Gaps = 20/257 (7%)
Query: 431 IVRAT-NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIK--KFHSPLPCDQIADQKEFLIE 486
+ R T N+F+ +G G G V E +G+ A+K K + D++A L E
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTE 59
Query: 487 VKALTEIRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
+ L RH + Y F +H R F V E G L LS + E R
Sbjct: 60 NRVLQNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE----DRARFY 114
Query: 546 KG-VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG 604
+ AL YLH + +V++D+ +NL+LD + + DFG+ K + + F G
Sbjct: 115 GAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG 172
Query: 605 TYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD 664
T Y+APE+ D + GV++ E + G+ P L I ++EI
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLFELILMEEIRF 229
Query: 665 PR-LPPPSRSVQEKLIS 680
PR L P ++S+ L+
Sbjct: 230 PRTLGPEAKSLLSGLLK 246
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 108/251 (43%), Gaps = 19/251 (7%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIK--KFHSPLPCDQIADQKEFLIEVKALTE 492
N+F+ +G G G V E +G+ A+K K + D++A L E + L
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQN 64
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E R +
Sbjct: 65 SRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE----DRARFYGAEIVS 119
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH + +V++D+ +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 120 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P L I ++EI PR L P
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLFELILMEEIRFPRTLGP 234
Query: 670 PSRSVQEKLIS 680
++S+ L+
Sbjct: 235 EAKSLLSGLLK 245
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F + +G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 76
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 133
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 243
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 244 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 274
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 71
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 128
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG AK L E + G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 238
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 239 RLPQPPICT----IDVYMIMRKCWMIDADSRPKFR 269
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV + ++ SG +A+KK P I K E++ L ++H N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 503 GFCSHA------RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ A +LV L+ A L++ Q+L +I + L Y+H
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 171
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT 616
I+H+D+ NL ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 172 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 225
Query: 617 -MKITEKCDVYSFGVLVLEAIKGK 639
M D++S G ++ E + G+
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 479 DQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL-G 537
D ++ E + ++H NIV+ + S H +L+++L+ G L D A+E
Sbjct: 53 DHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF----EDIVAREYYS 108
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKP 594
+ + I+ + +A+ + H +VH+++ +NLLL + + +ADFG+A ++
Sbjct: 109 EADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165
Query: 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E W FAGT GY++PE+ + D+++ GV++ + G P
Sbjct: 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + + +S L S +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 119 CHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 434 ATNDFDAQY-------CIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKE 482
+T D++ Q CIG G G V++ S VAIK + C + +++
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREK 437
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
FL E + + H +IVK G + +++ EL G L + L + +L + +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--ASLI 494
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++ AL+YL F VH+DI+++N+L+ + DFG++++++ +S+ +
Sbjct: 495 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKAS 550
Query: 603 AGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
G ++APE + T DV+ FGV + E +
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 108/251 (43%), Gaps = 19/251 (7%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIK--KFHSPLPCDQIADQKEFLIEVKALTE 492
N+F+ +G G G V E +G+ A+K K + D++A L E + L
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQN 66
Query: 493 IRHRNIVKF-YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-VAD 550
RH + Y F +H R F V E G L LS + E R +
Sbjct: 67 SRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE----DRARFYGAEIVS 121
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
AL YLH + +V++D+ +NL+LD + + DFG+ K + + F GT Y+A
Sbjct: 122 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-LPP 669
PE+ D + GV++ E + G+ P L I ++EI PR L P
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLFELILMEEIRFPRTLGP 236
Query: 670 PSRSVQEKLIS 680
++S+ L+
Sbjct: 237 EAKSLLSGLLK 247
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F + +G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 76
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 133
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 243
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 244 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 274
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S +VY + + A Q L + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F +G+G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 71
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 128
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG AK L E + G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 238
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 239 RLPQPPICT----IDVYMIMRKCWMIDADSRPKFR 269
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + +S L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES--SNWTEFAGT 605
+ AL YLH I+H+D+ +N+LL+ + + DFG AK L PES + F GT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
YV+PEL + D+++ G ++ + + G P F + I L+
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPA 258
Query: 666 RLPPPSRSVQEKLISI 681
P +R + EKL+ +
Sbjct: 259 AFFPKARDLVEKLLVL 274
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 33/282 (11%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G +VA+K+ P DQ Q++F E++ L + I
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQ---QRDFQREIQILKALHSDFI 86
Query: 499 VKFYGFC-SHARHSF-LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL- 555
VK+ G R S LV E L G L L A L S+ + + + YL
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 144
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT---EFAGTYGYVAPE 612
C VH+D++++N+L++ E +ADFG+AK L + + + APE
Sbjct: 145 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKHPR-DFLSLISSSS---LNTDIALDEILD 664
+ + DV+SFGV++ E K P +FL ++ + +
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260
Query: 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
RLP P E + E+ C SP+ RP+ + Q+
Sbjct: 261 QRLPAPPACPAE----VHELMKLCWAPSPQDRPSFSALGPQL 298
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + +S L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%), Gaps = 25/217 (11%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAELPS------GQVVAIKKFHSPLPCDQIADQKEFLIEVK 488
++++D + +G G V R + +++ KK + D ++ E +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLEREAR 80
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL-GWSQRMNVIKG 547
+++H NIV+ + +LV++L+ G L D A+E + + I+
Sbjct: 81 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQ 136
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAG 604
+ ++++Y H + IVH+++ +NLLL + + +ADFG+A + +S W FAG
Sbjct: 137 ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAG 192
Query: 605 TYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
T GY++PE+ ++ D+++ GV++ + G P
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD------QKEFLIEVK 488
+F + +G G+VY+ +P G+ V I P+ ++ + KE L E
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI-----PVAIKELREATSPKANKEILDEAY 69
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
+ + + ++ + G C + L+ +L+ G L + +G +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQI 126
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY-- 606
A ++YL +VH+D++++N+L+ + DFG+AK L E + G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665
++A E T + DV+S+GV V E + G P D I +S +++ + E
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---IPASEISSILEKGE---- 236
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
RLP P I + + C +SRP +
Sbjct: 237 RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 267
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 33/282 (11%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G +VA+K+ P DQ Q++F E++ L + I
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQ---QRDFQREIQILKALHSDFI 74
Query: 499 VKFYGFC-SHARHSF-LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL- 555
VK+ G R S LV E L G L L A L S+ + + + YL
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 132
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT---EFAGTYGYVAPE 612
C VH+D++++N+L++ E +ADFG+AK L + + + APE
Sbjct: 133 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 188
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKHPR-DFLSLISSSSLNTDIA---LDEILD 664
+ + DV+SFGV++ E K P +FL ++ +
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEG 248
Query: 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
RLP P E + E+ C SP+ RP+ + Q+
Sbjct: 249 QRLPAPPACPAE----VHELMKLCWAPSPQDRPSFSALGPQL 286
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + +S L S +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 120 CHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 434 ATNDFDAQY-------CIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKE 482
+T D++ Q CIG G G V++ S VAIK + C + +++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREK 57
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
FL E + + H +IVK G + +++ EL G L + L + +L + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--ASLI 114
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++ AL+YL F VH+DI+++N+L+ + DFG++++++ +S+
Sbjct: 115 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKAS 170
Query: 603 AGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
G ++APE + T DV+ FGV + E +
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 434 ATNDFDAQY-------CIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKE 482
+T D++ Q CIG G G V++ S VAIK + C + +++
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREK 437
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
FL E + + H +IVK G + +++ EL G L + L + +L + +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--ASLI 494
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
++ AL+YL F VH+DI+++N+L+ + DFG++++++ +S+ +
Sbjct: 495 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 550
Query: 603 AGTY--GYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
G ++APE + T DV+ FGV + E +
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E L + +S L S +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 121 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 443 CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
CIG G G V++ S + VAIK + C + +++FL E + + H +I
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMRQFDHPHI 70
Query: 499 VKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
VK G + +++ EL G L + L + +L + + ++ AL+YL
Sbjct: 71 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESK 127
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY--GYVAPELAYT 616
F VH+DI+++N+L+ + DFG++++++ +S+ + G ++APE
Sbjct: 128 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 183
Query: 617 MKITEKCDVYSFGVLVLEAI 636
+ T DV+ FGV + E +
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 27/238 (11%)
Query: 478 ADQKEFLI-EVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAA-- 533
AD+KE L+ E+K ++ + +H NIV G C+H ++ E G L L A
Sbjct: 82 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 141
Query: 534 -----QELGWSQRMNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587
+ L ++ VA +++L +C +H+D++++N+LL + A + DFG
Sbjct: 142 DKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFG 197
Query: 588 IAKFLKPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDF 644
+A+ + +S+ + ++APE + T + DV+S+G+L+ E G +P
Sbjct: 198 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 257
Query: 645 LSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ L++S ++ P P + + SIM+ +C P RPT + +
Sbjct: 258 I-LVNSKFYKLVKDGYQMAQPAFAP------KNIYSIMQ---ACWALEPTHRPTFQQI 305
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 443 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF 501
IG G V A + +G+ VA+K + + QK F EV+ + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFR-EVRIXKVLNHPNIVKL 78
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
+ + +LV E G + L + +E + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT- 620
IVH+D+ ++NLLLD + +ADFG + + F G Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 621 EKCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + SG+ VAIKK P + A K E+ L ++H N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFA--KRAYRELLLLKHMQHENVIGLL 107
Query: 503 GFCSHAR-----HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ A + F + + L I+ + + +++ + ++ + L Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHS 162
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT- 616
+VH+D+ NL ++ + E + DFG+A+ E T + T Y APE+ +
Sbjct: 163 AG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEM---TGYVVTRWYRAPEVILSW 216
Query: 617 MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + GK
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V + + + Q A+K + ++ D L EV+ L ++ H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTILREVELLKKLDHPNIMKLF 87
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+ ++V EL G L + +IK V ++Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 563 IVHQDISSKNLLLD---LEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKI 619
IVH+D+ +N+LL+ + + + DFG++ + +++ + GT Y+APE+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRGT-Y 199
Query: 620 TEKCDVYSFGVLVLEAIKGKHP 641
EKCDV+S GV++ + G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492
+ +F IG G +G VY+A +G+VVA+KK + + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGW--SQRMNVIKGVAD 550
+ H NIVK +LV+E +++ + +S L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
S+ ++H+D+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 611 PELAYTMK-ITEKCDVYSFGVLVLEAI 636
PE+ K + D++S G + E +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V + + + Q A+K + ++ D L EV+ L ++ H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTILREVELLKKLDHPNIMKLF 87
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+ ++V EL G L + +IK V ++Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 563 IVHQDISSKNLLLD---LEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKI 619
IVH+D+ +N+LL+ + + + DFG++ + +++ + GT Y+APE+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRGT-Y 199
Query: 620 TEKCDVYSFGVLVLEAIKGKHP 641
EKCDV+S GV++ + G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
E++ L RH +I+K Y S F+V E + G L + +E+ + +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLF 117
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT 605
+ + A+ Y H +VH+D+ +N+LLD A +ADFG++ + + + G+
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGS 173
Query: 606 YGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHPRD 643
Y APE ++ + + D++S GV++ + G P D
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 114/270 (42%), Gaps = 31/270 (11%)
Query: 444 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G G G VY ++ G+ VA+K + + ++ EFL E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-------LGWSQRMNVIKGVAD 550
+V+ G S + + +V EL+ G L + L S E + + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG--TYGY 608
++YL+ F VH+D++++N ++ ++ + DFG+ + + G +
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 609 VAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+APE T D++SFGV++ E L+ L+ + L ++D
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESRPT 698
+ E++ +M + C +P+ RPT
Sbjct: 252 DQPDNCPERVTDLMRM---CWQFNPKMRPT 278
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 27/238 (11%)
Query: 478 ADQKEFLI-EVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAA-- 533
AD+KE L+ E+K ++ + +H NIV G C+H ++ E G L L A
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 149
Query: 534 -----QELGWSQRMNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587
+ L ++ VA +++L +C +H+D++++N+LL + A + DFG
Sbjct: 150 DKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFG 205
Query: 588 IAKFLKPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDF 644
+A+ + +S+ + ++APE + T + DV+S+G+L+ E G +P
Sbjct: 206 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 265
Query: 645 LSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVV 702
+ L++S ++ P P + + SIM+ +C P RPT + +
Sbjct: 266 I-LVNSKFYKLVKDGYQMAQPAFAP------KNIYSIMQ---ACWALEPTHRPTFQQI 313
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 432 VRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIK--KFHSPLPCDQIADQKEFLIEVK 488
+ +++ F +GNG + +VY+ +G VA+K K S A + E+
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA-----IREIS 55
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK-- 546
+ E++H NIV+ Y LV+E ++ L + S T +N++K
Sbjct: 56 LMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPR-GLELNLVKYF 113
Query: 547 --GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG 604
+ L++ H + I+H+D+ +NLL++ + + DFG+A+ + ++
Sbjct: 114 QWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV 170
Query: 605 TYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGK 639
T Y AP+ L + + D++S G ++ E I GK
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 48/279 (17%)
Query: 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
DF IG+GG G V++A+ G+ IK+ ++ A++ EVKAL ++ H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---NEKAER-----EVKALAKLDH 63
Query: 496 RNIVKFYGFC-----------------SHARHSFLVYELLERGSLAAILSSDTAAQELGW 538
NIV + G C S + F+ E ++G+L + ++L
Sbjct: 64 VNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK-RRGEKLDK 121
Query: 539 SQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598
+ + + + + Y+H ++++D+ N+ L + + DFG+ LK +
Sbjct: 122 VLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 599 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIA 658
GT Y++PE + ++ D+Y+ G+++ E + H D + +S TD+
Sbjct: 179 -XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCD--TAFETSKFFTDLR 232
Query: 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRP 697
D I+ +++ +KL+S + PE RP
Sbjct: 233 -DGIISDIFDKKEKTLLQKLLS----------KKPEDRP 260
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 31/242 (12%)
Query: 478 ADQKEFLI-EVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLERGSL-------AAILS 528
AD+KE L+ E+K ++ + +H NIV G C+H ++ E G L + +L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLE 149
Query: 529 SD----TAAQELGWSQRMNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHV 583
+D A L ++ VA +++L +C +H+D++++N+LL + A +
Sbjct: 150 TDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKI 205
Query: 584 ADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKH 640
DFG+A+ + +S+ + ++APE + T + DV+S+G+L+ E G +
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265
Query: 641 PRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700
P + L++S ++ P P + + SIM+ +C P RPT +
Sbjct: 266 PYPGI-LVNSKFYKLVKDGYQMAQPAFAP------KNIYSIMQ---ACWALEPTHRPTFQ 315
Query: 701 VV 702
+
Sbjct: 316 QI 317
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 21/236 (8%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +G+V A + +G VAIKK + P + A K E++ L +RH N++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA--KRAYRELRLLKHMRHENVIGLL 90
Query: 503 GFCS--HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
+ F + L+ + L ++LG + ++ + L Y+H
Sbjct: 91 DVFTPDETLDDFTDFYLV-MPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA--- 146
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT-MKI 619
I+H+D+ NL ++ + E + DFG+A+ E T Y APE+ M+
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXG---XVVTRWYRAPEVILNWMRY 203
Query: 620 TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675
T+ D++S G ++ E I GK +L S + D L EI+ PP+ VQ
Sbjct: 204 TQTVDIWSVGCIMAEMITGK------TLFKGSD-HLD-QLKEIMKVTGTPPAEFVQ 251
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN--VIKGVADA 551
+H NI+ +H +LV EL+ G L D ++ +S+R V+ +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELL-----DKILRQKFFSEREASFVLHTIGKT 133
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYE----AHVADFGIAKFLKPESSNWTEFAGTYG 607
+ YLH +VH+D+ N+L E + DFG AK L+ E+ T
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 608 YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+VAPE+ E CD++S G+L+ + G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 35/272 (12%)
Query: 444 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G G G VY ++ G+ VA+K + + ++ EFL E + +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 80
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-------LGWSQRMNVIKGVAD 550
+V+ G S + + +V EL+ G L + L S E + + + +AD
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT----Y 606
++YL+ F VH+D++++N ++ ++ + DFG+ + + +++ G
Sbjct: 141 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 195
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666
++APE T D++SFGV++ E L+ L+ + L ++D
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGG 248
Query: 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPT 698
+ E++ +M + C +P+ RPT
Sbjct: 249 YLDQPDNCPERVTDLMRM---CWQFNPKMRPT 277
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 114/270 (42%), Gaps = 31/270 (11%)
Query: 444 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G G G VY ++ G+ VA+K + + ++ EFL E + +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 78
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-------LGWSQRMNVIKGVAD 550
+V+ G S + + +V EL+ G L + L S E + + + +AD
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG--TYGY 608
++YL+ F VH+D++++N ++ ++ + DFG+ + + G +
Sbjct: 139 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 609 VAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+APE T D++SFGV++ E L+ L+ + L ++D
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGYL 248
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESRPT 698
+ E++ +M + C +P+ RPT
Sbjct: 249 DQPDNCPERVTDLMRM---CWQFNPKMRPT 275
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 37/273 (13%)
Query: 444 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G G G VY ++ G+ VA+K + + ++ EFL E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-------LGWSQRMNVIKGVAD 550
+V+ G S + + +V EL+ G L + L S E + + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYG--- 607
++YL+ F VH+D++++N ++ ++ + DFG+ + + E++ + + G G
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY-ETAYYRK--GGKGLLP 195
Query: 608 --YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665
++APE T D++SFGV++ E L+ L+ + L ++D
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDG 248
Query: 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPT 698
+ E++ +M + C +P+ RPT
Sbjct: 249 GYLDQPDNCPERVTDLMRM---CWQFNPKMRPT 278
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 436 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
+ +D +G G G V+R E +G A K +P D+ +KE ++ ++ +R
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKE----IQTMSVLR 212
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
H +V + ++YE + G L ++ + ++ + + ++ V L +
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCH 270
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEY--EAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
+H + + VH D+ +N++ + E + DFG+ L P+ S GT + APE
Sbjct: 271 MHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-TGTAEFAAPE 326
Query: 613 LAYTMKITEKCDVYSFGVLV------LEAIKGKHPRDFLSLISSSSLNTD 656
+A + D++S GVL L G++ + L + S N D
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 131/292 (44%), Gaps = 53/292 (18%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
+D + +G G +G V + +PSGQ++A+K+ + + +QK L+++ +I
Sbjct: 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQEQKRLLMDL----DI 102
Query: 494 RHRNI-----VKFYGFCSHARHSFLVYEL----LERGSLAAILSSDTAAQELGWSQRMNV 544
R + V FYG ++ EL L++ I T +++ +++
Sbjct: 103 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 545 IKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG 604
+K AL +LH ++H+D+ N+L++ + + DFGI+ +L +S T AG
Sbjct: 163 VK----ALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAG 215
Query: 605 TYGYVAPEL--------AYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD 656
Y+APE Y++ K D++S G+ ++E + P D S T
Sbjct: 216 CKPYMAPERINPELNQKGYSV----KSDIWSLGITMIELAILRFPYD--------SWGTP 263
Query: 657 I-ALDEILD---PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704
L ++++ P+LP S + ++ CL ++ + RPT + Q
Sbjct: 264 FQQLKQVVEEPSPQLPADKFSAE-----FVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 35/272 (12%)
Query: 444 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G G G VY ++ G+ VA+K + + ++ EFL E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-------LGWSQRMNVIKGVAD 550
+V+ G S + + +V EL+ G L + L S E + + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT----Y 606
++YL+ F VH+D++++N ++ ++ + DFG+ + + +++ G
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 196
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666
++APE T D++SFGV++ E L+ L+ + L ++D
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGG 249
Query: 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPT 698
+ E++ +M + C +P+ RPT
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPKMRPT 278
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 412 NPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSP 471
+P+ + +L +GK + TN IGNG G V++A+L VAIKK
Sbjct: 20 DPNKVIKVLASDGKTGEQREIAYTN----CKVIGNGSFGVVFQAKLVESDEVAIKKV--- 72
Query: 472 LPCDQIADQKEFLIEVKALTEIRHRNIV--KFYGFCSHARHSFLVYELLERGSLAAILSS 529
+ D++ E++ + ++H N+V K + + + + + L+ + +
Sbjct: 73 -----LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRA 127
Query: 530 DTAAQELGWSQRMNVIK----GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA-HVA 584
+L + M +IK + +L+Y+H I H+DI +NLLLD +
Sbjct: 128 SRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLI 184
Query: 585 DFGIAKFLKPESSNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLVLEAIKGK 639
DFG AK L N + Y Y APEL + T D++S G ++ E ++G+
Sbjct: 185 DFGSAKILIAGEPNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 33/244 (13%)
Query: 478 ADQKEFLI-EVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILS------- 528
AD+KE L+ E+K ++ + +H NIV G C+H ++ E G L L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGL 149
Query: 529 ------SDTAAQELGWSQRMNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEA 581
S ++L ++ VA +++L +C +H+D++++N+LL + A
Sbjct: 150 EYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVA 205
Query: 582 HVADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-G 638
+ DFG+A+ + +S+ + ++APE + T + DV+S+G+L+ E G
Sbjct: 206 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 265
Query: 639 KHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPT 698
+P + L++S ++ P P + + SIM+ +C P RPT
Sbjct: 266 LNPYPGI-LVNSKFYKLVKDGYQMAQPAFAP------KNIYSIMQ---ACWALEPTHRPT 315
Query: 699 MKVV 702
+ +
Sbjct: 316 FQQI 319
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 98
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 214
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 146
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + E T Y APE+
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 27/221 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G V A +V VAIKK P + + L E+K L RH NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 503 GFC-----SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ ++V +L+E L +L + Q L + + L Y+H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS 147
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN---WTEFAGTYGYVAPELA 614
++H+D+ NLLL+ + + DFG+A+ P+ + E T Y APE+
Sbjct: 148 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 615 YTMK-ITEKCDVYSFGVLVLEAIK------GKHPRDFLSLI 648
K T+ D++S G ++ E + GKH D L+ I
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 87
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 203
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 19/228 (8%)
Query: 438 FDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR 496
+D +G G G V+R E +G A K +P D+ +KE ++ ++ +RH
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKE----IQTMSVLRHP 108
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+V + ++YE + G L ++ + ++ + + ++ V L ++H
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 557 HDCFPPIVHQDISSKNLLLDLEY--EAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
+ + VH D+ +N++ + E + DFG+ L P+ S GT + APE+A
Sbjct: 167 ENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-TGTAEFAAPEVA 222
Query: 615 YTMKITEKCDVYSFGVLV------LEAIKGKHPRDFLSLISSSSLNTD 656
+ D++S GVL L G++ + L + S N D
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 207
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 80
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 196
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 113/270 (41%), Gaps = 31/270 (11%)
Query: 444 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G G G VY ++ G+ VA+K + + ++ EFL E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-------LGWSQRMNVIKGVAD 550
+V+ G S + + +V EL+ G L + L S E + + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG--TYGY 608
++YL+ F VH+D++++N ++ ++ + DFG+ + + G +
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 609 VAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+APE T D++SFGV++ E L+ L+ + L ++D
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESRPT 698
+ E++ +M + C +P RPT
Sbjct: 252 DQPDNCPERVTDLMRM---CWQFNPNMRPT 278
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 83
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 199
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
E++ L RH +I+K Y S F+V E + G L + +E+ + +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLF 117
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT 605
+ + A+ Y H +VH+D+ +N+LLD A +ADFG++ + T G+
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS-CGS 173
Query: 606 YGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHPRD 643
Y APE ++ + + D++S GV++ + G P D
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 229
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN--VIKGVADA 551
+H NI+ +H +LV EL+ G L D ++ +S+R V+ +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELL-----DKILRQKFFSEREASFVLHTIGKT 133
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYE----AHVADFGIAKFLKPESSNWTEFAGTYG 607
+ YLH +VH+D+ N+L E + DFG AK L+ E+ T
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 608 YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+VAPE+ E CD++S G+L+ + G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 207
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 117
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 233
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%), Gaps = 25/217 (11%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAELPS------GQVVAIKKFHSPLPCDQIADQKEFLIEVK 488
++++D + +G G V R + +++ KK + D ++ E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLEREAR 57
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL-GWSQRMNVIKG 547
+++H NIV+ + +LV++L+ G L D A+E + + I+
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQ 113
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAG 604
+ ++++Y H + IVH+++ +NLLL + + +ADFG+A + +S W FAG
Sbjct: 114 ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAG 169
Query: 605 TYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
T GY++PE+ ++ D+++ GV++ + G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 26/220 (11%)
Query: 429 DEIVRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEV 487
+E+ AT+ Q +G G G V+R E +G A+KK + + E L+
Sbjct: 90 EEVHWATH----QLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV------FRAEELMAC 139
Query: 488 KALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG 547
LT R IV YG + ELLE GSL ++ E + + +
Sbjct: 140 AGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQ 193
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVADFGIAKFLKPESSNWTEFAGTY 606
+ L YLH I+H D+ + N+LL + A + DFG A L+P+ + G Y
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 607 -----GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
++APE+ K DV+S ++L + G HP
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%), Gaps = 25/217 (11%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAELPS------GQVVAIKKFHSPLPCDQIADQKEFLIEVK 488
++++D + +G G V R + +++ KK + D ++ E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLEREAR 57
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL-GWSQRMNVIKG 547
+++H NIV+ + +LV++L+ G L D A+E + + I+
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQ 113
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAG 604
+ ++++Y H + IVH+++ +NLLL + + +ADFG+A + +S W FAG
Sbjct: 114 ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAG 169
Query: 605 TYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
T GY++PE+ ++ D+++ GV++ + G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G +V+R +G + AIK F++ + Q + E + L ++ H+NIVK +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ---MREFEVLKKLNHKNIVKLF 73
Query: 503 GFC--SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
+ RH L+ E GSL +L + A L S+ + V++ V +++L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 561 PPIVHQDISSKNLLL----DLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA-- 614
IVH++I N++ D + + DFG A+ L+ + + GT Y+ P++
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDMYER 189
Query: 615 ------YTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ K D++S GV A G P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 115
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 231
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 19/229 (8%)
Query: 479 DQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAA--QEL 536
+++E EV L ++H NIV++ ++V + E G L +++ QE
Sbjct: 66 EREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE- 124
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596
Q ++ + AL ++H I+H+DI S+N+ L + + DFGIA+ L
Sbjct: 125 --DQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179
Query: 597 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD 656
GT Y++PE+ K D+++ G ++ E KH + S+ +
Sbjct: 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-------KN 232
Query: 657 IALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705
+ L +I+ PP S L S++ F +P RP++ + ++
Sbjct: 233 LVL-KIISGSFPPVSLHYSYDLRSLVSQLF---KRNPRDRPSVNSILEK 277
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 195
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 92
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 208
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 41/247 (16%)
Query: 478 ADQKEFLI-EVKALTEI-RHRNIVKFYGFCSHARHSFLVYE----------------LLE 519
AD+KE L+ E+K ++ + +H NIV G C+H ++ E +LE
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLE 149
Query: 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLE 578
AI +S + ++L ++ VA +++L +C +H+D++++N+LL
Sbjct: 150 TDPAFAIANSTASTRDL-----LHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNG 200
Query: 579 YEAHVADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAI 636
+ A + DFG+A+ + +S+ + ++APE + T + DV+S+G+L+ E
Sbjct: 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
Query: 637 K-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPES 695
G +P + L++S ++ P P + + SIM+ +C P
Sbjct: 261 SLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAFAP------KNIYSIMQ---ACWALEPTH 310
Query: 696 RPTMKVV 702
RPT + +
Sbjct: 311 RPTFQQI 317
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%), Gaps = 25/217 (11%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAELPS------GQVVAIKKFHSPLPCDQIADQKEFLIEVK 488
++++D + +G G V R + +++ KK + D ++ E +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLEREAR 56
Query: 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQEL-GWSQRMNVIKG 547
+++H NIV+ + +LV++L+ G L D A+E + + I+
Sbjct: 57 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQ 112
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA---HVADFGIAKFLKPESSNWTEFAG 604
+ ++++Y H + IVH+++ +NLLL + + +ADFG+A + +S W FAG
Sbjct: 113 ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAG 168
Query: 605 TYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
T GY++PE+ ++ D+++ GV++ + G P
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 229
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 158
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 274
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 84
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 200
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 440 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNI 498
++ +G G G+V G+ VA+K+ CD IA L+E+K LTE H N+
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CD-IA-----LMEIKLLTESDDHPNV 71
Query: 499 VKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN---VIKGVADALSYL 555
+++Y + R ++ EL + S + + + L + N +++ +A +++L
Sbjct: 72 IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 556 HHDCFPPIVHQDISSKNLLL--------DLEYEAH-----VADFGIAKFLKPESS----N 598
H I+H+D+ +N+L+ D + A ++DFG+ K L S N
Sbjct: 132 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 599 WTEFAGTYGYVAPE-------LAYTMKITEKCDVYSFGVLVLEAI-KGKHP 641
+GT G+ APE L ++T D++S G + + KGKHP
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
IGNG G VY+A+L SG++VAIKK + D++ E++ + ++ H NIV+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 107
Query: 502 YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
Y F S VY + + A Q L + + +L+Y+H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615
I H+DI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 223
Query: 616 -TMKITEKCDVYSFGVLVLEAIKGK 639
T DV+S G ++ E + G+
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G+G +GSV A + SG+ VAIKK P + A K E+ L ++H N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFA--KRAYRELLLLKHMQHENVIGLL 89
Query: 503 GFCSHAR-----HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+ A + F + + L I+ + +++ + ++ + L Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHS 144
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT- 616
+VH+D+ NL ++ + E + DFG+A+ E T + T Y APE+ +
Sbjct: 145 ---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM---TGYVVTRWYRAPEVILSW 198
Query: 617 MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E + GK
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 123/301 (40%), Gaps = 46/301 (15%)
Query: 429 DEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIA--DQKEFLIE 486
++++ F +G G GSV A+L +K L D IA D +EFL E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 487 VKALTEIRHRNIVKFYGFCSHARHS------FLVYELLERGSLAAILSSDTAAQE---LG 537
+ E H ++ K G +R ++ ++ G L A L + + L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
+ + +A + YL F +H+D++++N +L + VADFG+++ +
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSRKI----- 187
Query: 598 NWTEFAGTY-----------GYVAPELAYTMKITEKCDVYSFGVLVLEAI-KGKHPRDFL 645
++G Y ++A E T DV++FGV + E + +G+ P +
Sbjct: 188 ----YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243
Query: 646 SLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705
N +I I RL P ++E + ++ + C + P+ RP+ + +
Sbjct: 244 E-------NAEIYNYLIGGNRLKQPPECMEE----VYDLMYQCWSADPKQRPSFTCLRME 292
Query: 706 V 706
+
Sbjct: 293 L 293
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSP---LPCDQIADQKEFLIEVKALTEIRHRNIV 499
+G G +V+R +G + AIK F++ P D +EF + L ++ H+NIV
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD--VQMREF----EVLKKLNHKNIV 70
Query: 500 KFYGFC--SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
K + + RH L+ E GSL +L + A L S+ + V++ V +++L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 558 DCFPPIVHQDISSKNLLL----DLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
+ IVH++I N++ D + + DFG A+ L+ + + GT Y+ P++
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPDM 186
Query: 614 A--------YTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ K D++S GV A G P
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 128/315 (40%), Gaps = 74/315 (23%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIE--VKALTEIRHRNIVKF 501
IG G +G+VY+ L + VA+K F A+++ F+ E + + + H NI +F
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVF-------SFANRQNFINEKNIYRVPLMEHDNIARF 72
Query: 502 Y----GFCSHARHSFL-VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ R +L V E GSL LS T+ W + V L+YLH
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLH 128
Query: 557 HDC------FPPIVHQDISSKNLLLDLEYEAHVADFGIA------KFLKP--ESSNWTEF 602
+ P I H+D++S+N+L+ + ++DFG++ + ++P E +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 603 AGTYGYVAPEL---AYTMKITE----KCDVYSFGVLVLEAIK------------------ 637
GT Y+APE+ A ++ E + D+Y+ G++ E
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF 248
Query: 638 ----GKHP--RDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNE 691
G HP D L+S E P+ P + + S+ E C ++
Sbjct: 249 QTEVGNHPTFEDMQVLVSR----------EKQRPKFPEAWKENSLAVRSLKETIEDCWDQ 298
Query: 692 SPESRPTMKVVTQQV 706
E+R T + +++
Sbjct: 299 DAEARLTAQXAEERM 313
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
E+ L +I+H NIV H +LV +L+ G L + E S VI
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VI 112
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKNLLL---DLEYEAHVADFGIAKFLKPESSNWTEF 602
+ V A+ YLH + IVH+D+ +NLL + + + DFG++K ++ +
Sbjct: 113 QQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTA 167
Query: 603 AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
GT GYVAPE+ ++ D +S GV+ + G P
Sbjct: 168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 131/293 (44%), Gaps = 53/293 (18%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
+D + +G G +G V + +PSGQ++A+K+ + + + QK L+++ +I
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE---QKRLLMDL----DI 58
Query: 494 RHRNI-----VKFYGFCSHARHSFLVYEL----LERGSLAAILSSDTAAQELGWSQRMNV 544
R + V FYG ++ EL L++ I T +++ +++
Sbjct: 59 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 545 IKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG 604
+K AL +LH ++H+D+ N+L++ + + DFGI+ +L + + + AG
Sbjct: 119 VK----ALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AG 171
Query: 605 TYGYVAPEL--------AYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD 656
Y+APE Y++ K D++S G+ ++E + P D S T
Sbjct: 172 CKPYMAPERINPELNQKGYSV----KSDIWSLGITMIELAILRFPYD--------SWGTP 219
Query: 657 I-ALDEILD---PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705
L ++++ P+LP S + ++ CL ++ + RPT + Q
Sbjct: 220 FQQLKQVVEEPSPQLPADKFSAE-----FVDFTSQCLKKNSKERPTYPELMQH 267
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 122/292 (41%), Gaps = 61/292 (20%)
Query: 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
DF IG+GG G V++A+ G+ I++ ++ A++ EVKAL ++ H
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYN---NEKAER-----EVKALAKLDH 64
Query: 496 RNIVKFYGFC------------------------------SHARHSFLVYELLERGSLAA 525
NIV + G C S + F+ E ++G+L
Sbjct: 65 VNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQ 123
Query: 526 ILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585
+ ++L + + + + + Y+H ++H+D+ N+ L + + D
Sbjct: 124 WIEK-RRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFL 645
FG+ LK + T GT Y++PE + ++ D+Y+ G+++ E + H D
Sbjct: 180 FGLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCD-- 233
Query: 646 SLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRP 697
+ +S TD+ D I+ +++ +KL+S + PE RP
Sbjct: 234 TAFETSKFFTDLR-DGIISDIFDKKEKTLLQKLLS----------KKPEDRP 274
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 444 IGNGGHGSVYRA-ELPSGQ----VVAIKKFH---SPLPCDQIADQKEFLIEVKALTEIRH 495
+G+G G+VY+ +P G+ VAIK SP KE L E + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP------KANKEILDEAYVMAGVGS 78
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
+ + G C + LV +L+ G L + + LG +N +A +SYL
Sbjct: 79 PYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRG--RLGSQDLLNWCMQIAKGMSYL 135
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY--GYVAPEL 613
+VH+D++++N+L+ + DFG+A+ L + + + G ++A E
Sbjct: 136 ED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 614 AYTMKITEKCDVYSFGVLVLEAIK-GKHPRD 643
+ T + DV+S+GV V E + G P D
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 25/206 (12%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G+G +GSV Y A L Q VA+KK P + + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPF--QSLIHARRTYRELRLLKHLKHENVIG 91
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ A +LV L+ A L++ +Q L ++ + L Y
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM-----GADLNNIVKSQALSDEHVQFLVYQLLRGLKY 146
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
+H I+H+D+ N+ ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 147 IHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM---TGYVATRWYRAPEIM 200
Query: 615 YT-MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E ++GK
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 126/315 (40%), Gaps = 72/315 (22%)
Query: 424 GKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEF 483
G+ + ++V+AT A + G G+ +V V +K+ SP ++ ++
Sbjct: 32 GEGEFGKVVKAT----AFHLKGRAGYTTV--------AVKMLKENASP------SELRDL 73
Query: 484 LIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSS-------------- 529
L E L ++ H +++K YG CS L+ E + GSL L
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 530 ---------DTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE 580
D A +G ++ ++ + YL +VH+D++++N+L+ +
Sbjct: 134 RNSSSLDHPDERALTMG--DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRK 188
Query: 581 AHVADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK- 637
++DFG+++ + E S G ++A E + T + DV+SFGVL+ E +
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
Query: 638 ------GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNE 691
G P +L+ + R+ P +E + + C +
Sbjct: 249 GGNPYPGIPPERLFNLLKTGH-------------RMERPDNCSEE----MYRLMLQCWKQ 291
Query: 692 SPESRPTMKVVTQQV 706
P+ RP +++ +
Sbjct: 292 EPDKRPVFADISKDL 306
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFL-IEVKALTEIRHRNIVKF 501
IGNG G VY+A+L SG++VAIKK + K F E++ + ++ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 502 -YGFCSHARHSFLVYELLERGSLAAILSS-----DTAAQELGWSQRMNVIKGVADALSYL 555
Y F S VY L + A + A Q L + + +L+Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
H I H+DI +NLLLD + + DFG AK L N + Y Y APEL
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 194
Query: 615 Y-TMKITEKCDVYSFGVLVLEAIKGK 639
+ T DV+S G ++ E + G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK-FLKPESSNWTEFAGT- 605
VA + YL F VH+D++++N +LD + VADFG+A+ L E + +
Sbjct: 133 VARGMEYLAEQKF---VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189
Query: 606 --YGYVAPELAYTMKITEKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALDEI 662
+ A E T + T K DV+SFGVL+ E + +G P I L +A
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP---YRHIDPFDLTHFLAQGR- 245
Query: 663 LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
RLP P S+ +V C P RPT +V+ +V
Sbjct: 246 ---RLPQPEYCPD----SLYQVMQQCWEADPAVRPTFRVLVGEV 282
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 126/315 (40%), Gaps = 72/315 (22%)
Query: 424 GKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEF 483
G+ + ++V+AT A + G G+ +V V +K+ SP ++ ++
Sbjct: 32 GEGEFGKVVKAT----AFHLKGRAGYTTV--------AVKMLKENASP------SELRDL 73
Query: 484 LIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSS-------------- 529
L E L ++ H +++K YG CS L+ E + GSL L
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 530 ---------DTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE 580
D A +G ++ ++ + YL +VH+D++++N+L+ +
Sbjct: 134 RNSSSLDHPDERALTMG--DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRK 188
Query: 581 AHVADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK- 637
++DFG+++ + E S G ++A E + T + DV+SFGVL+ E +
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
Query: 638 ------GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNE 691
G P +L+ + R+ P +E + + C +
Sbjct: 249 GGNPYPGIPPERLFNLLKTGH-------------RMERPDNCSEE----MYRLMLQCWKQ 291
Query: 692 SPESRPTMKVVTQQV 706
P+ RP +++ +
Sbjct: 292 EPDKRPVFADISKDL 306
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 429 DEIVRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEV 487
+E+ AT+ Q +G G G V+R E +G A+KK + + E L+
Sbjct: 71 EEVHWATH----QLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV------FRAEELMAC 120
Query: 488 KALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG 547
LT R IV YG + ELLE GSL ++ E + + +
Sbjct: 121 AGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQ 174
Query: 548 VADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVADFGIAKFLKPESSNWTEFAGTY 606
+ L YLH I+H D+ + N+LL + A + DFG A L+P+ G Y
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 607 -----GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
++APE+ K DV+S ++L + G HP
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 115/282 (40%), Gaps = 33/282 (11%)
Query: 444 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G GSV +G +VA+K+ P DQ Q++F E++ L + I
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQ---QRDFQREIQILKALHSDFI 70
Query: 499 VKFYG--FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL- 555
VK+ G + LV E L G L L A L S+ + + + YL
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 128
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL---KPESSNWTEFAGTYGYVAPE 612
C VH+D++++N+L++ E +ADFG+AK L K + APE
Sbjct: 129 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 613 LAYTMKITEKCDVYSFGVLVLEAI----KGKHPR-DFLSLISSSSLNTDIA---LDEILD 664
+ + DV+SFGV++ E K P +FL ++ +
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEG 244
Query: 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
RLP P E + E+ C SP+ RP+ + Q+
Sbjct: 245 QRLPAPPACPAE----VHELMKLCWAPSPQDRPSFSALGPQL 282
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G+G +GSV Y A L Q VA+KK P + + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPF--QSLIHARRTYRELRLLKHLKHENVIG 91
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ A +LV L+ A L++ Q L ++ + L Y
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM-----GADLNNIVKCQALSDEHVQFLVYQLLRGLKY 146
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
+H I+H+D+ N+ ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 147 IHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM---TGYVATRWYRAPEIM 200
Query: 615 YT-MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E ++GK
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
+G+G +GSV Y A L Q VA+KK P + + E++ L ++H N++
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPF--QSLIHARRTYRELRLLKHLKHENVIG 83
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ A +LV L+ A L++ Q L ++ + L Y
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLM-----GADLNNIVKCQALSDEHVQFLVYQLLRGLKY 138
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
+H I+H+D+ N+ ++ + E + DFG+A+ E T + T Y APE+
Sbjct: 139 IHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEM---TGYVATRWYRAPEIM 192
Query: 615 YT-MKITEKCDVYSFGVLVLEAIKGK 639
M + D++S G ++ E ++GK
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 126/315 (40%), Gaps = 72/315 (22%)
Query: 424 GKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEF 483
G+ + ++V+AT A + G G+ +V V +K+ SP ++ ++
Sbjct: 32 GEGEFGKVVKAT----AFHLKGRAGYTTV--------AVKMLKENASP------SELRDL 73
Query: 484 LIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSS-------------- 529
L E L ++ H +++K YG CS L+ E + GSL L
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 530 ---------DTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE 580
D A +G ++ ++ + YL +VH+D++++N+L+ +
Sbjct: 134 RNSSSLDHPDERALTMG--DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRK 188
Query: 581 AHVADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK- 637
++DFG+++ + E S G ++A E + T + DV+SFGVL+ E +
Sbjct: 189 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
Query: 638 ------GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNE 691
G P +L+ + R+ P +E + + C +
Sbjct: 249 GGNPYPGIPPERLFNLLKTGH-------------RMERPDNCSEE----MYRLMLQCWKQ 291
Query: 692 SPESRPTMKVVTQQV 706
P+ RP +++ +
Sbjct: 292 EPDKRPVFADISKDL 306
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 15/222 (6%)
Query: 437 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR 496
DF+ IG G G V +L + V K + + A+ F E L +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILS--SDTAAQELGWSQRMNVIKGVADALSY 554
I + + +LV + G L +LS D +E+ ++ + D++
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI-DSVHQ 193
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG-IAKFLKPESSNWTEFAGTYGYVAPEL 613
LH+ VH+DI N+L+D+ +ADFG K ++ + + GT Y++PE+
Sbjct: 194 LHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI 247
Query: 614 AYTM-----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS 650
M + +CD +S GV + E + G+ P SL+ +
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G+V++A+ + ++VA+K+ L D L E+ L E++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQ-ELGWSQRMNVIKGVADALSYLHHDCFP 561
+ LV+E ++ S + E+ S ++KG L + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG----LGFCHSR--- 120
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKI-T 620
++H+D+ +NLL++ E +ADFG+A+ ++ T Y P++ + K+ +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 621 EKCDVYSFGVLVLEAIKGKHP 641
D++S G + E P
Sbjct: 181 TSIDMWSAGCIFAELANAARP 201
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 116/272 (42%), Gaps = 35/272 (12%)
Query: 444 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G G G VY ++ G+ VA+K + + ++ EFL E + +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 82
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-------LGWSQRMNVIKGVAD 550
+V+ G S + + +V EL+ G L + L S E + + + +AD
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT----Y 606
++YL+ F VH++++++N ++ ++ + DFG+ + + +++ G
Sbjct: 143 GMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 197
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666
++APE T D++SFGV++ E L+ L+ + L ++D
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGG 250
Query: 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPT 698
+ E++ +M + C +P RPT
Sbjct: 251 YLDQPDNCPERVTDLMRM---CWQFNPNMRPT 279
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 116/272 (42%), Gaps = 35/272 (12%)
Query: 444 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
+G G G VY ++ G+ VA+K + + ++ EFL E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE-------LGWSQRMNVIKGVAD 550
+V+ G S + + +V EL+ G L + L S E + + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT----Y 606
++YL+ F VH++++++N ++ ++ + DFG+ + + +++ G
Sbjct: 142 GMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 196
Query: 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666
++APE T D++SFGV++ E L+ L+ + L ++D
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGG 249
Query: 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPT 698
+ E++ +M + C +P RPT
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPNMRPT 278
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS 539
++E EV L EIRH NI+ + + L+ EL+ G L L+ + E +
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPE 595
Q +K + D + YLH I H D+ +N +LLD + DFGIA K E
Sbjct: 133 Q---FLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIE 184
Query: 596 SSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ N EF +G +VAPE+ + + D++S GV+ + G P
Sbjct: 185 AGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 12/221 (5%)
Query: 437 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR 496
D++ IG G G V S + V K S + +D F E +
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 497 NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+V+ + R+ ++V E + G L ++S+ ++ W++ V AL +H
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALDAIH 190
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA-GTYGYVAPELAY 615
F +H+D+ N+LLD +ADFG + E + A GT Y++PE+
Sbjct: 191 SMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 616 TM----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS 652
+ +CD +S GV + E + G P SL+ + S
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS 539
++E EV L EIRH NI+ + + L+ EL+ G L L+ + E +
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 111
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPE 595
Q +K + D + YLH I H D+ +N +LLD + DFGIA K E
Sbjct: 112 Q---FLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIE 163
Query: 596 SSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ N EF +G +VAPE+ + + D++S GV+ + G P
Sbjct: 164 AGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 437 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR 496
D++ IG G G V S + V K S + +D F E +
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 497 NIVK-FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
+V+ FY F R+ ++V E + G L ++S+ ++ W++ V AL +
Sbjct: 130 WVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALDAI 184
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA-GTYGYVAPELA 614
H F +H+D+ N+LLD +ADFG + E + A GT Y++PE+
Sbjct: 185 HSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 241
Query: 615 YTM----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS 652
+ +CD +S GV + E + G P SL+ + S
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 283
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 22/258 (8%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V+R S + + KF DQ+ +KE I L RHRNI+ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISI----LNIARHRNILHLHE 68
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH-HDCFPP 562
+++E + L +T+A EL + ++ + V +AL +LH H+
Sbjct: 69 SFESMEELVMIFEFI--SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---- 122
Query: 563 IVHQDISSKNLLLDLEYEA--HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
I H DI +N++ + + +FG A+ LKP N+ Y APE+ ++
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-GDNFRLLFTAPEYYAPEVHQHDVVS 181
Query: 621 EKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS 680
D++S G LV + G +P FL + N I ++ I++ + +E I
Sbjct: 182 TATDMWSLGTLVYVLLSGINP--FL-----AETNQQI-IENIMNAEYTFDEEAFKEISIE 233
Query: 681 IMEVAFSCLNESPESRPT 698
M+ L + +SR T
Sbjct: 234 AMDFVDRLLVKERKSRMT 251
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 92/206 (44%), Gaps = 23/206 (11%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFL-IEVKALTEIRHRNIVKF 501
IGNG G VY+A+L SG++VAIKK + K F E++ + ++ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 502 -YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
Y F S VY + + A Q L + + +L+Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
H I H+DI +NLLLD + + DFG AK L N + Y Y APEL
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 194
Query: 615 Y-TMKITEKCDVYSFGVLVLEAIKGK 639
+ T DV+S G ++ E + G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 92/206 (44%), Gaps = 23/206 (11%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFL-IEVKALTEIRHRNIVKF 501
IGNG G VY+A+L SG++VAIKK + K F E++ + ++ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 502 -YGFCSHARHSFLVY-----ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
Y F S VY + + A Q L + + +L+Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEA-HVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
H I H+DI +NLLLD + + DFG AK L N + Y Y APEL
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 194
Query: 615 Y-TMKITEKCDVYSFGVLVLEAIKGK 639
+ T DV+S G ++ E + G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 39/231 (16%)
Query: 440 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNI 498
++ +G G G+V G+ VA+K+ CD IA L+E+K LTE H N+
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CD-IA-----LMEIKLLTESDDHPNV 71
Query: 499 VKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN---VIKGVADALSYL 555
+++Y + R ++ EL + S + + + L + N +++ +A +++L
Sbjct: 72 IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 556 HHDCFPPIVHQDISSKNLLL--------DLEYEAH-----VADFGIAKFLKPES----SN 598
H I+H+D+ +N+L+ D + A ++DFG+ K L N
Sbjct: 132 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 188
Query: 599 WTEFAGTYGYVAPE-------LAYTMKITEKCDVYSFGVLVLEAI-KGKHP 641
+GT G+ APE L ++T D++S G + + KGKHP
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 437 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR 496
D++ IG G G V S + V K S + +D F E +
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 497 NIVK-FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
+V+ FY F R+ ++V E + G L ++S+ ++ W++ V AL +
Sbjct: 135 WVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALDAI 189
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA-GTYGYVAPELA 614
H F +H+D+ N+LLD +ADFG + E + A GT Y++PE+
Sbjct: 190 HSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 615 YTM----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS 652
+ +CD +S GV + E + G P SL+ + S
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS 539
++E EV L EIRH NI+ + + L+ EL+ G L L+ + E
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---D 115
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPE 595
+ +K + D + YLH I H D+ +N +LLD + DFGIA K E
Sbjct: 116 EATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIE 170
Query: 596 SSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ N EF +G +VAPE+ + + D++S GV+ + G P
Sbjct: 171 AGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
I+++D+ N++LD E +ADFG+ K + EF GT Y+APE+ +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKS 200
Query: 623 CDVYSFGVLVLEAIKGKHPRD 643
D +++GVL+ E + G+ P D
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFD 221
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 19/237 (8%)
Query: 428 YDEIVRA-------TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQ 480
Y++IV+ D+D IG G G V + Q V K S + +D
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 481 KEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQ 540
F E + +V+ + ++ ++V E + G L ++S+ ++ W++
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK--WAK 177
Query: 541 RMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
V AL +H ++H+D+ N+LLD +ADFG +
Sbjct: 178 FYTA--EVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC 232
Query: 601 EFA-GTYGYVAPELAYTM----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS 652
+ A GT Y++PE+ + +CD +S GV + E + G P SL+ + S
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYS 289
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
E++ L RH +I+K Y S F+V E + G L + + E + +
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE---KESRRLF 122
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT 605
+ + + Y H +VH+D+ +N+LLD A +ADFG++ + + G+
Sbjct: 123 QQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGS 178
Query: 606 YGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHPRD 643
Y APE ++ + + D++S GV++ + G P D
Sbjct: 179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 40/251 (15%)
Query: 478 ADQKEFLI-EVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAA-- 533
AD+KE L+ E+K ++ + +H NIV G C+H ++ E G L L A
Sbjct: 75 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAML 134
Query: 534 ------------------QELGWSQRMNVIKGVADALSYL-HHDCFPPIVHQDISSKNLL 574
+ L ++ VA +++L +C +H+D++++N+L
Sbjct: 135 GPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVL 190
Query: 575 LDLEYEAHVADFGIAKFLKPESSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLV 632
L + A + DFG+A+ + +S+ + ++APE + T + DV+S+G+L+
Sbjct: 191 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 250
Query: 633 LEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNE 691
E G +P + L++S ++ P P + + SIM+ +C
Sbjct: 251 WEIFSLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAFAP------KNIYSIMQ---ACWAL 300
Query: 692 SPESRPTMKVV 702
P RPT + +
Sbjct: 301 EPTHRPTFQQI 311
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFL--IEVKALTEIRHRNI 498
Q IG G G V+R + G+ VA+K F S +++ + E+ +RH NI
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSS-------REERSWFREAEIYQTVMLRHENI 98
Query: 499 VKFYGFCSHARHSF----LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ F + ++ LV + E GSL L+ T E + + A L++
Sbjct: 99 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 154
Query: 555 LHHDCF-----PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFA 603
LH + P I H+D+ SKN+L+ +AD G+A ++ +S+ T
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRV 212
Query: 604 GTYGYVAPEL---AYTMKITE---KCDVYSFGVLVLE 634
GT Y+APE+ + MK E + D+Y+ G++ E
Sbjct: 213 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 249
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 12/209 (5%)
Query: 437 DFDAQYCIGNG-GHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
D + Y + N G GS ++ + I++ +P + D F E++ + + H
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH 82
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
NI++ Y +LV EL G L + +E S ++K V A++Y
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE---SDAARIMKDVLSAVAYC 139
Query: 556 HHDCFPPIVHQDISSKNLLL---DLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
H + H+D+ +N L + + DFG+A KP T+ GT YV+P+
Sbjct: 140 HK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQ 195
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + E CD +S GV++ + G P
Sbjct: 196 VLEGLYGPE-CDEWSAGVMMYVLLCGYPP 223
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 12/209 (5%)
Query: 437 DFDAQYCIGNG-GHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
D + Y + N G GS ++ + I++ +P + D F E++ + + H
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH 65
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
NI++ Y +LV EL G L + +E S ++K V A++Y
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE---SDAARIMKDVLSAVAYC 122
Query: 556 HHDCFPPIVHQDISSKNLLL---DLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
H + H+D+ +N L + + DFG+A KP T+ GT YV+P+
Sbjct: 123 HK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQ 178
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ + E CD +S GV++ + G P
Sbjct: 179 VLEGLYGPE-CDEWSAGVMMYVLLCGYPP 206
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 9/208 (4%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
++F+ +G G G V A + +G + A+K + Q D + + E + L+ R
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL-QDDDVECTMTEKRILSLAR 81
Query: 495 -HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALS 553
H + + + F V E + G L + E ++ + AL
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE---ARARFYAAEIISALM 138
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPEL 613
+LH I+++D+ N+LLD E +ADFG+ K F GT Y+APE+
Sbjct: 139 FLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI 195
Query: 614 AYTMKITEKCDVYSFGVLVLEAIKGKHP 641
M D ++ GVL+ E + G P
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 63/298 (21%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIK----KFHSPLPCDQIADQKEFLIEVKALTEI 493
+G G VY+ L Q VAIK K PL ++EF E +
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL-------REEFRHEAMLRARL 86
Query: 494 RHRNIVKFYG-------------FCSHAR-HSFLVYELLERGSLAAILSSD---TAAQEL 536
+H N+V G +CSH H FLV R + + S+D T L
Sbjct: 87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVM----RSPHSDVGSTDDDRTVKSAL 142
Query: 537 GWSQRMNVIKGVADALSYL--HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594
++++ +A + YL HH +VH+D++++N+L+ + ++D G+ F +
Sbjct: 143 EPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREV 195
Query: 595 ESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLIS 649
++++ + G ++APE K + D++S+GV++ E G P S
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--- 252
Query: 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707
N D+ ++ I + ++ P + ++M C NE P RP K + ++R
Sbjct: 253 ----NQDV-VEMIRNRQVLPCPDDCPAWVYALM---IECWNEFPSRRPRFKDIHSRLR 302
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFL--IEVKALTEIRHRNI 498
Q IG G G V+R + G+ VA+K F S +++ + E+ +RH NI
Sbjct: 34 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 85
Query: 499 VKFYGFCSHARHSF----LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ F + ++ LV + E GSL L+ T E + + A L++
Sbjct: 86 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 141
Query: 555 LHHDCF-----PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFA 603
LH + P I H+D+ SKN+L+ +AD G+A ++ +S+ T
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRV 199
Query: 604 GTYGYVAPEL---AYTMKITE---KCDVYSFGVLVLE 634
GT Y+APE+ + MK E + D+Y+ G++ E
Sbjct: 200 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 236
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 63/298 (21%)
Query: 444 IGNGGHGSVYRAEL------PSGQVVAIK----KFHSPLPCDQIADQKEFLIEVKALTEI 493
+G G VY+ L Q VAIK K PL ++EF E +
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL-------REEFRHEAMLRARL 69
Query: 494 RHRNIVKFYG-------------FCSHAR-HSFLVYELLERGSLAAILSSD---TAAQEL 536
+H N+V G +CSH H FLV R + + S+D T L
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVM----RSPHSDVGSTDDDRTVKSAL 125
Query: 537 GWSQRMNVIKGVADALSYL--HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594
++++ +A + YL HH +VH+D++++N+L+ + ++D G+ F +
Sbjct: 126 EPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREV 178
Query: 595 ESSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLIS 649
++++ + G ++APE K + D++S+GV++ E G P S
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--- 235
Query: 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707
N D+ ++ I + ++ P + ++M C NE P RP K + ++R
Sbjct: 236 ----NQDV-VEMIRNRQVLPCPDDCPAWVYALM---IECWNEFPSRRPRFKDIHSRLR 285
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
DF+ IG G G V ++ + + + K + + A+ F E L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILS--SDTAAQELGWSQRMNVIKGVADALS 553
+ I + H +LV + G L +LS D +++ ++ + D++
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-DSIH 192
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA-GTYGYVAPE 612
LH+ VH+DI N+LLD+ +ADFG + + + + A GT Y++PE
Sbjct: 193 QLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPE 246
Query: 613 LAYTM-----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS 650
+ M K +CD +S GV + E + G+ P SL+ +
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH 495
DF+ IG G G V ++ + + + K + + A+ F E L
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILS--SDTAAQELGWSQRMNVIKGVADALS 553
+ I + H +LV + G L +LS D +++ ++ + D++
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-DSIH 208
Query: 554 YLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA-GTYGYVAPE 612
LH+ VH+DI N+LLD+ +ADFG + + + + A GT Y++PE
Sbjct: 209 QLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPE 262
Query: 613 LAYTM-----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS 650
+ M K +CD +S GV + E + G+ P SL+ +
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 305
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 100/245 (40%), Gaps = 50/245 (20%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQI--ADQKEFLIEVKALTEIRHRNIVKF 501
IG G +G V A + + K + QI D + EV+ + ++ H NI +
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 502 YGFCSHARHSFLVYELLERGSLAAILS---SDTAA------------------------- 533
Y ++ LV EL G L L+ D+
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 534 -----QELGWSQR----MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL--DLEYEAH 582
+ L + QR N+++ + AL YLH+ I H+DI +N L + +E
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIK 210
Query: 583 VADFGIAK-FLKPESSNW---TEFAGTYGYVAPELAYTMKITE--KCDVYSFGVLVLEAI 636
+ DFG++K F K + + T AGT +VAPE+ T + KCD +S GVL+ +
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
Query: 637 KGKHP 641
G P
Sbjct: 271 MGAVP 275
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG G +G V+ + G+ VA+K F + + E+ +RH NI+ F
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE-----TEIYQTVLMRHENILGFIA 98
Query: 504 FCSHARHS----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC 559
S +L+ + E GSL L S T L + + L +LH +
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKSTT----LDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 560 F-----PPIVHQDISSKNLLLDLEYEAHVADFGIA-KFLKPESSNWTEF-----AGTYGY 608
F P I H+D+ SKN+L+ +AD G+A KF+ +N + GT Y
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI--SDTNEVDIPPNTRVGTKRY 212
Query: 609 VAPEL-----------AYTMKITEKCDVYSFGVLVLEAIK 637
+ PE+ +Y M D+YSFG+++ E +
Sbjct: 213 MPPEVLDESLNRNHFQSYIM-----ADMYSFGLILWEVAR 247
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFL--IEVKALTEIRHRNI 498
Q IG G G V+R + G+ VA+K F S +++ + E+ +RH NI
Sbjct: 11 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 62
Query: 499 VKFYGFCSHARHSF----LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ F + ++ LV + E GSL L+ T E + + A L++
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 118
Query: 555 LHHDCF-----PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFA 603
LH + P I H+D+ SKN+L+ +AD G+A ++ +S+ T
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRV 176
Query: 604 GTYGYVAPEL---AYTMKITE---KCDVYSFGVLVLE 634
GT Y+APE+ + MK E + D+Y+ G++ E
Sbjct: 177 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 213
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFL--IEVKALTEIRHRNI 498
Q IG G G V+R + G+ VA+K F S +++ + E+ +RH NI
Sbjct: 9 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 60
Query: 499 VKFYGFCSHARHSF----LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ F + ++ LV + E GSL L+ T E + + A L++
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 116
Query: 555 LHHDCF-----PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFA 603
LH + P I H+D+ SKN+L+ +AD G+A ++ +S+ T
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRV 174
Query: 604 GTYGYVAPEL---AYTMKITE---KCDVYSFGVLVLE 634
GT Y+APE+ + MK E + D+Y+ G++ E
Sbjct: 175 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFL--IEVKALTEIRHRNI 498
Q IG G G V+R + G+ VA+K F S +++ + E+ +RH NI
Sbjct: 14 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 65
Query: 499 VKFYGFCSHARHSF----LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ F + ++ LV + E GSL L+ T E + + A L++
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 121
Query: 555 LHHDCF-----PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFA 603
LH + P I H+D+ SKN+L+ +AD G+A ++ +S+ T
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRV 179
Query: 604 GTYGYVAPEL---AYTMKITE---KCDVYSFGVLVLE 634
GT Y+APE+ + MK E + D+Y+ G++ E
Sbjct: 180 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 7/207 (3%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE-IR 494
+DF IG G G V A + +V K + ++K + E L + ++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
H +V + A + V + + G L L + E + +A AL Y
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE---PRARFYAAEIASALGY 154
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH IV++D+ +N+LLD + + DFG+ K +S + F GT Y+APE+
Sbjct: 155 LHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ D + G ++ E + G P
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFL--IEVKALTEIRHRNI 498
Q IG G G V+R + G+ VA+K F S +++ + E+ +RH NI
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 59
Query: 499 VKFYGFCSHARHSF----LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ F + ++ LV + E GSL L+ T E + + A L++
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 115
Query: 555 LHHDCF-----PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT------EFA 603
LH + P I H+D+ SKN+L+ +AD G+A ++ +S+ T
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRV 173
Query: 604 GTYGYVAPEL---AYTMKITE---KCDVYSFGVLVLE 634
GT Y+APE+ + MK E + D+Y+ G++ E
Sbjct: 174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG G +G+V++A+ + ++VA+K+ L D L E+ L E++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQ-ELGWSQRMNVIKGVADALSYLHHDCFP 561
+ LV+E ++ S + E+ S ++KG L + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG----LGFCHSR--- 120
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKI-T 620
++H+D+ +NLL++ E +A+FG+A+ ++ T Y P++ + K+ +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 621 EKCDVYSFGVLVLEAIKGKHP 641
D++S G + E P
Sbjct: 181 TSIDMWSAGCIFAELANAGRP 201
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V A +GQ VA+K + + Q E+ L +RH +I+K Y
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHIIKLY 79
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+V E I+ D +++ + + + A+ Y H
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 132
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAYTMKITE 621
IVH+D+ +NLLLD +ADFG++ + + + G+ Y APE ++ +
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 191
Query: 622 KCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + + P D
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFD 213
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 484 LIEVKALTEIR-HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
L EV L ++ H NI++ FLV++L+++G L L+ E + M
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
+ V AL L+ IVH+D+ +N+LLD + + DFG + L P E
Sbjct: 118 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 170
Query: 603 AGTYGYVAPELAYTMK------ITEKCDVYSFGVLVLEAIKGKHP 641
GT Y+APE+ ++ D++S GV++ + G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 54/294 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P+ VA+K S ++D + E++ + I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-------------SDTAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L S ++L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 542 MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNW 599
++ VA + YL +H+D++++N+L+ + +ADFG+A+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP------RDFLSLISSSS 652
T ++APE + T + DV+SFGVL+ E G P + L+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PS E + + + C + P RPT K + + +
Sbjct: 270 -------------RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 306
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V A +GQ VA+K + + Q E+ L +RH +I+K Y
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHIIKLY 80
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+V E I+ D +++ + + + A+ Y H
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 133
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAYTMKITE 621
IVH+D+ +NLLLD +ADFG++ + + + G+ Y APE ++ +
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 192
Query: 622 KCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + + P D
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V A +GQ VA+K + + Q E+ L +RH +I+K Y
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHIIKLY 74
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+V E I+ D +++ + + + A+ Y H
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 127
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAYTMKITE 621
IVH+D+ +NLLLD +ADFG++ + + + G+ Y APE ++ +
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 186
Query: 622 KCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + + P D
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFD 208
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 438 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497
FD + IG G +VY+ L + V + ++++ F E + L ++H N
Sbjct: 30 FDIE--IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 498 IVKFY----GFCSHARHSFLVYELLERGSLAAILSSDTAAQ-ELGWSQRMNVIKGVADAL 552
IV+FY + LV EL G+L L + ++ S ++KG L
Sbjct: 87 IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKG----L 142
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
+LH PPI+H+D+ N+ + + D G+A + +S GT + AP
Sbjct: 143 QFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTPEFXAP 199
Query: 612 ELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E Y K E DVY+FG LE ++P
Sbjct: 200 E-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V A +GQ VA+K + + Q E+ L +RH +I+K Y
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHIIKLY 70
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
+V E I+ D +++ + + + A+ Y H
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 123
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAYTMKITE 621
IVH+D+ +NLLLD +ADFG++ + + + G+ Y APE ++ +
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 182
Query: 622 KCDVYSFGVLVLEAIKGKHPRD 643
+ DV+S GV++ + + P D
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFD 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSN 598
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 599 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLE 634
T ++APE + T + DV+SFGVL+ E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 435 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI 493
+D + +G G +G V + +PSGQ+ A+K+ + + + QK L ++ +I
Sbjct: 33 ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQE---QKRLLXDL----DI 85
Query: 494 RHRNI-----VKFYGFCSHARHSFLVYEL----LERGSLAAILSSDTAAQELGWSQRMNV 544
R + V FYG ++ EL L++ I T +++ +++
Sbjct: 86 SXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 145
Query: 545 IKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG 604
+K AL +LH ++H+D+ N+L++ + DFGI+ +L + + + AG
Sbjct: 146 VK----ALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-AG 198
Query: 605 TYGYVAPEL--------AYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD 656
Y APE Y++ K D++S G+ +E + P D S T
Sbjct: 199 CKPYXAPERINPELNQKGYSV----KSDIWSLGITXIELAILRFPYD--------SWGTP 246
Query: 657 I-ALDEILD---PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705
L ++++ P+LP S + ++ CL ++ + RPT + Q
Sbjct: 247 FQQLKQVVEEPSPQLPADKFSAE-----FVDFTSQCLKKNSKERPTYPELXQH 294
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 20/258 (7%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
+G GG G V+ ++ +G++ A KK + + Q ++E K L ++ R IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA-MVEKKILAKVHSRFIVSLA 251
Query: 502 YGFCSHARHSFLVYELLERGSLAA-ILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y F + LV ++ G + I + D + + + L +LH
Sbjct: 252 YAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-- 308
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
I+++D+ +N+LLD + ++D G+A LK + +AGT G++APEL +
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 621 EKCDVYSFGVLVLEAIKGKHP-RDFLSLISSSSLNTDIALDEILDP-RLPPPSRSVQEKL 678
D ++ GV + E I + P R + + L + + P + P S+ E L
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 679 ISIMEVAFSCLNESPESR 696
L + PE R
Sbjct: 428 ----------LQKDPEKR 435
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 117/295 (39%), Gaps = 56/295 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P+ VA+K S ++D + E++ + I +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 133
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-------------SDTAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L S ++L
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ VA + YL C +H+D++++N+L+ + +ADFG+A+ +
Sbjct: 194 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 601 EFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP------RDFLSLISSS 651
G ++APE + T + DV+SFGVL+ E G P + L+
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 309
Query: 652 SLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PS E + + + C + P RPT K + + +
Sbjct: 310 H-------------RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 347
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 36/282 (12%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G GG V E L G A+K+ + C + D++E E H NI++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKR----ILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 503 GFCSHAR----HSFLVYELLERGSLA-AILSSDTAAQELGWSQRMNVIKGVADALSYLHH 557
+C R ++L+ +RG+L I L Q + ++ G+ L +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 558 DCFPPIVHQDISSKNLLLDLEYEAHVADFGI--AKFLKPESS-------NWTEFAGTYGY 608
+ H+D+ N+LL E + + D G + E S +W T Y
Sbjct: 153 KGY---AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 609 VAPELAYTMK---ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD- 664
APEL I E+ DV+S G ++ + G+ P D ++ + +A+ L
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD---MVFQKGDSVALAVQNQLSI 266
Query: 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
P+ P S ++ + L S+M V P RP + ++ Q+
Sbjct: 267 PQSPRHSSALWQLLNSMMTV-------DPHQRPHIPLLLSQL 301
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 20/258 (7%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
+G GG G V+ ++ +G++ A KK + + Q ++E K L ++ R IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA-MVEKKILAKVHSRFIVSLA 251
Query: 502 YGFCSHARHSFLVYELLERGSLAA-ILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y F + LV ++ G + I + D + + + L +LH
Sbjct: 252 YAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-- 308
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
I+++D+ +N+LLD + ++D G+A LK + +AGT G++APEL +
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 621 EKCDVYSFGVLVLEAIKGKHP-RDFLSLISSSSLNTDIALDEILDP-RLPPPSRSVQEKL 678
D ++ GV + E I + P R + + L + + P + P S+ E L
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 679 ISIMEVAFSCLNESPESR 696
L + PE R
Sbjct: 428 ----------LQKDPEKR 435
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 484 LIEVKALTEIR-HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
L EV L ++ H NI++ FLV++L+++G L L+ E + M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
+ V AL L+ IVH+D+ +N+LLD + + DFG + L P E
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 183
Query: 603 AGTYGYVAPELAYTMK------ITEKCDVYSFGVLVLEAIKGKHP 641
GT Y+APE+ ++ D++S GV++ + G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 40/220 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K + ++D + E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSD---LVSEMEMMKMIGK 99
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 601 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLVLE 634
+ T ++APE + T + DV+SFGVL+ E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 20/258 (7%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
+G GG G V+ ++ +G++ A KK + + Q ++E K L ++ R IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA-MVEKKILAKVHSRFIVSLA 251
Query: 502 YGFCSHARHSFLVYELLERGSLAA-ILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y F + LV ++ G + I + D + + + L +LH
Sbjct: 252 YAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-- 308
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
I+++D+ +N+LLD + ++D G+A LK + +AGT G++APEL +
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 621 EKCDVYSFGVLVLEAIKGKHP-RDFLSLISSSSLNTDIALDEILDP-RLPPPSRSVQEKL 678
D ++ GV + E I + P R + + L + + P + P S+ E L
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 679 ISIMEVAFSCLNESPESR 696
L + PE R
Sbjct: 428 ----------LQKDPEKR 435
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 444 IGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V+R + +G A+KK + + E L+ L+ R IV Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPR---IVPLY 116
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G + ELLE GSL ++ E + + + + L YLH
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 170
Query: 563 IVHQDISSKNLLLDLE-YEAHVADFGIAKFLKPESSNWTEFAGTY-----GYVAPELAYT 616
I+H D+ + N+LL + A + DFG A L+P+ + G Y ++APE+
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 617 MKITEKCDVYSFGVLVLEAIKGKHP 641
K D++S ++L + G HP
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 20/258 (7%)
Query: 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKF- 501
+G GG G V+ ++ +G++ A KK + + Q ++E K L ++ R IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA-MVEKKILAKVHSRFIVSLA 251
Query: 502 YGFCSHARHSFLVYELLERGSLAA-ILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF 560
Y F + LV ++ G + I + D + + + L +LH
Sbjct: 252 YAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-- 308
Query: 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT 620
I+++D+ +N+LLD + ++D G+A LK + +AGT G++APEL +
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 621 EKCDVYSFGVLVLEAIKGKHP-RDFLSLISSSSLNTDIALDEILDP-RLPPPSRSVQEKL 678
D ++ GV + E I + P R + + L + + P + P S+ E L
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 679 ISIMEVAFSCLNESPESR 696
L + PE R
Sbjct: 428 ----------LQKDPEKR 435
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSN 598
++ +A + YL C +H+D++++N+L+ +ADFG+A+ +
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 599 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLE 634
T ++APE + T + DV+SFGVL+ E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR--MNVIKGVADA 551
+H NI+ ++ ++V EL++ G L D ++ +S+R V+ +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELL-----DKILRQKFFSEREASAVLFTITKT 128
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEY----EAHVADFGIAKFLKPESSNWTEFAGTYG 607
+ YLH +VH+D+ N+L E + DFG AK L+ E+ T
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN 185
Query: 608 YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+VAPE+ CD++S GVL+ + G P
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 444 IGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V+R + +G A+KK + + E L+ L+ R IV Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPR---IVPLY 130
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G + ELLE GSL ++ E + + + + L YLH
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 184
Query: 563 IVHQDISSKNLLLDLE-YEAHVADFGIAKFLKPESSNWTEFAGTY-----GYVAPELAYT 616
I+H D+ + N+LL + A + DFG A L+P+ + G Y ++APE+
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 617 MKITEKCDVYSFGVLVLEAIKGKHP 641
K D++S ++L + G HP
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
I+++D+ N++LD E +ADFG+ K + F GT Y+APE+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 623 CDVYSFGVLVLEAIKGKHP 641
D ++FGVL+ E + G+ P
Sbjct: 523 VDWWAFGVLLYEMLAGQAP 541
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLAR----DINNID 211
Query: 601 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLVLE 634
+ T ++APE + T + DV+SFGVL+ E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSN 598
++ +A + YL C +H+D++++N+L+ +ADFG+A+ +
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 599 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLE 634
T ++APE + T + DV+SFGVL+ E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 444 IGNGGHGSVYR-AELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V+R + +G A+KK + + E L+ L+ R IV Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPR---IVPLY 132
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562
G + ELLE GSL ++ E + + + + L YLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 186
Query: 563 IVHQDISSKNLLLDLE-YEAHVADFGIAKFLKPESSNWTEFAGTY-----GYVAPELAYT 616
I+H D+ + N+LL + A + DFG A L+P+ + G Y ++APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 617 MKITEKCDVYSFGVLVLEAIKGKHP 641
K D++S ++L + G HP
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 54/294 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P+ VA+K S ++D + E++ + I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-------------SDTAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L S ++L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 542 MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTE 601
++ VA + YL +H+D++++N+L+ + +ADFG+A+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 602 FAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP------RDFLSLISSSS 652
G ++APE + T + DV+SFGVL+ E G P + L+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PS E + + + C + P RPT K + + +
Sbjct: 270 -------------RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 306
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 54/294 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P+ VA+K S ++D + E++ + I +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 77
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-------------SDTAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L S ++L
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 542 MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTE 601
++ VA + YL +H+D++++N+L+ + +ADFG+A+ +
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 602 FAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP------RDFLSLISSSS 652
G ++APE + T + DV+SFGVL+ E G P + L+
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 254
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PS E + + + C + P RPT K + + +
Sbjct: 255 -------------RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 291
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 54/294 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P+ VA+K S ++D + E++ + I +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 84
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-------------SDTAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L S ++L
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 542 MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTE 601
++ VA + YL +H+D++++N+L+ + +ADFG+A+ +
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 602 FAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP------RDFLSLISSSS 652
G ++APE + T + DV+SFGVL+ E G P + L+
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 261
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PS E + + + C + P RPT K + + +
Sbjct: 262 -------------RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 298
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 54/294 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P+ VA+K S ++D + E++ + I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-------------SDTAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L S ++L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 542 MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTE 601
++ VA + YL +H+D++++N+L+ + +ADFG+A+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 602 FAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP------RDFLSLISSSS 652
G ++APE + T + DV+SFGVL+ E G P + L+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PS E + + + C + P RPT K + + +
Sbjct: 270 -------------RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 306
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 54/294 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P+ VA+K S ++D + E++ + I +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 81
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-------------SDTAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L S ++L
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 542 MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTE 601
++ VA + YL +H+D++++N+L+ + +ADFG+A+ +
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 602 FAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP------RDFLSLISSSS 652
G ++APE + T + DV+SFGVL+ E G P + L+
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 258
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PS E + + + C + P RPT K + + +
Sbjct: 259 -------------RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 295
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 113/284 (39%), Gaps = 38/284 (13%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 91
Query: 497 NIVKFYGFCSHARHSFLV-YELLERGSLAAILSS---------DTAAQELGWSQRMNVIK 546
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNWTEFAG 604
VA + +L +H+D++++N+LL + + DFG+A+ + P+ +
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 605 TYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD 664
++APE + T + DV+SFGVL+ E SL +S + +DE
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKIDEEFX 257
Query: 665 PRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
RL +R + + + C + P RPT + + +
Sbjct: 258 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 601 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLVLE 634
+ T ++APE + T + DV+SFGVL+ E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
I+++D+ N++LD E +ADFG+ K + F GT Y+APE+ +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 623 CDVYSFGVLVLEAIKGKHP 641
D ++FGVL+ E + G+ P
Sbjct: 202 VDWWAFGVLLYEMLAGQAP 220
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 54/294 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P+ VA+K S ++D + E++ + I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-------------SDTAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L S ++L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 542 MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTE 601
++ VA + YL +H+D++++N+L+ + +ADFG+A+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 602 FAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP------RDFLSLISSSS 652
G ++APE + T + DV+SFGVL+ E G P + L+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PS E + + + C + P RPT K + + +
Sbjct: 270 -------------RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 306
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 145
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + +N
Sbjct: 206 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 257
Query: 601 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLVLE 634
+ T ++APE + T + DV+SFGVL+ E
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 297
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 54/294 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P+ VA+K S ++D + E++ + I +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 85
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILS-------------SDTAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L S ++L
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 542 MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTE 601
++ VA + YL +H+D++++N+L+ + +ADFG+A+ +
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 602 FAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP------RDFLSLISSSS 652
G ++APE + T + DV+SFGVL+ E G P + L+
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 262
Query: 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
R+ PS E + + + C + P RPT K + + +
Sbjct: 263 -------------RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 299
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 601 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLVLE 634
+ T ++APE + T + DV+SFGVL+ E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 429 DEIVRATNDFDAQYCIGNGGHGSVYRAE--LPSGQVVAIKKFH-----SPLPCDQIADQK 481
D + RA ++ IG G +G V++A G+ VA+K+ +P I +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-- 61
Query: 482 EFLIEVKALTEIRHRNIVKFYGFCSHARHS-----FLVYELLERGSLAAI--LSSDTAAQ 534
+ ++ L H N+V+ + C+ +R LV+E +++ + +
Sbjct: 62 --VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 535 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594
E +++G L +LH +VH+D+ +N+L+ + +ADFG+A+
Sbjct: 120 ETIKDMMFQLLRG----LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGK 639
+ + T T Y APE+ D++S G + E + K
Sbjct: 173 QMA-LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 121/302 (40%), Gaps = 51/302 (16%)
Query: 429 DEIVRATNDFDAQYCIGNGGHGSVYRAE--LPSGQVVAIKKFH-----SPLPCDQIADQK 481
D + RA ++ IG G +G V++A G+ VA+K+ +P I +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-- 61
Query: 482 EFLIEVKALTEIRHRNIVKFYGFCSHARHS-----FLVYELLERGSLAAI--LSSDTAAQ 534
+ ++ L H N+V+ + C+ +R LV+E +++ + +
Sbjct: 62 --VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 535 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594
E +++G L +LH +VH+D+ +N+L+ + +ADFG+A+
Sbjct: 120 ETIKDMMFQLLRG----LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGK-------------HP 641
+ + T T Y APE+ D++S G + E + K
Sbjct: 173 QMA-LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 231
Query: 642 RDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ--EKLISIM-----EVAFSCLNESPE 694
D + L D+AL PR S+S Q EK ++ + ++ CL +P
Sbjct: 232 LDVIGLPGEEDWPRDVAL-----PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPA 286
Query: 695 SR 696
R
Sbjct: 287 KR 288
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 86
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + +N
Sbjct: 147 VSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLAR----DINNID 198
Query: 601 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLVLE 634
+ T ++APE + T + DV+SFGVL+ E
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 238
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 121/302 (40%), Gaps = 51/302 (16%)
Query: 429 DEIVRATNDFDAQYCIGNGGHGSVYRAE--LPSGQVVAIKKFH-----SPLPCDQIADQK 481
D + RA ++ IG G +G V++A G+ VA+K+ +P I +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-- 61
Query: 482 EFLIEVKALTEIRHRNIVKFYGFCSHARHS-----FLVYELLERGSLAAI--LSSDTAAQ 534
+ ++ L H N+V+ + C+ +R LV+E +++ + +
Sbjct: 62 --VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 535 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594
E +++G L +LH +VH+D+ +N+L+ + +ADFG+A+
Sbjct: 120 ETIKDMMFQLLRG----LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGK-------------HP 641
+ + T T Y APE+ D++S G + E + K
Sbjct: 173 QMA-LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 231
Query: 642 RDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ--EKLISIM-----EVAFSCLNESPE 694
D + L D+AL PR S+S Q EK ++ + ++ CL +P
Sbjct: 232 LDVIGLPGEEDWPRDVAL-----PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPA 286
Query: 695 SR 696
R
Sbjct: 287 KR 288
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
IV++D+ +N+LLD ++D G+A + PE GT GY+APE+ + T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 623 CDVYSFGVLVLEAIKGKHP 641
D ++ G L+ E I G+ P
Sbjct: 366 PDWWALGCLLYEMIAGQSP 384
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 88
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + +N
Sbjct: 149 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 200
Query: 601 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLVLE 634
+ T ++APE + T + DV+SFGVL+ E
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 240
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 91
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ E +G+L L + +++ +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + +N
Sbjct: 152 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 203
Query: 601 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLVLE 634
+ T ++APE + T + DV+SFGVL+ E
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 113/284 (39%), Gaps = 38/284 (13%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 91
Query: 497 NIVKFYGFCSHARHSFLV-YELLERGSLAAILSS---------DTAAQELGWSQRMNVIK 546
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 547 GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNWTEFAG 604
VA + +L +H+D++++N+LL + + DFG+A+ + P+ +
Sbjct: 152 QVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 605 TYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD 664
++APE + T + DV+SFGVL+ E SL +S + +DE
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKIDEEFC 257
Query: 665 PRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
RL +R + + + C + P RPT + + +
Sbjct: 258 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR--MNVIKGVADA 551
+H NI+ ++ ++V EL + G L D ++ +S+R V+ +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELL-----DKILRQKFFSEREASAVLFTITKT 128
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEY----EAHVADFGIAKFLKPESSNWTEFAGTYG 607
+ YLH +VH+D+ N+L E + DFG AK L+ E+ T
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN 185
Query: 608 YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+VAPE+ CD++S GVL+ + G P
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 55/295 (18%)
Query: 444 IGNGGHGSVYRA------ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A + + VA+K P + +++ + E+K L+ + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 110
Query: 497 NIVKFYGFCSHARHSFLVYE---------LLERGSLAAILSSDTAA----------QELG 537
NIV G C+ + ++ E L R + I S + A E
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
S V KG+A S +C +H+D++++N+LL + DFG+A+ +K +S+
Sbjct: 171 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
Query: 598 NWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS--SSL 653
+ ++APE + T + DV+S+G+ + E SL SS +
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE---------LFSLGSSPYPGM 274
Query: 654 NTDIALDEILDP--RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
D +++ R+ P + E + IM+ +C + P RPT K + Q +
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAPAE-MYDIMK---TCWDADPLKRPTFKQIVQLI 325
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEK 622
IV++D+ +N+LLD ++D G+A + PE GT GY+APE+ + T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 623 CDVYSFGVLVLEAIKGKHP 641
D ++ G L+ E I G+ P
Sbjct: 366 PDWWALGCLLYEMIAGQSP 384
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKVVNHKNIIG 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L+ ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLVGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S GV++ E IKG
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 484 LIEVKALTEIR-HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
L EV L ++ H NI++ FLV++L+++G L L+ E + M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602
+ V AL L+ IVH+D+ +N+LLD + + DFG + L P
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSV 183
Query: 603 AGTYGYVAPELAYTMK------ITEKCDVYSFGVLVLEAIKGKHP 641
GT Y+APE+ ++ D++S GV++ + G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKVVNHKNIIG 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L+ ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLVGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S GV++ E IKG
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--IVKF 501
IG+GG V++ Q+ AIK + +Q D + E+ L +++ + I++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 77
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
Y + ++ +Y ++E G++ + S + + +R + K + +A+ +H
Sbjct: 78 YDYEITDQY---IYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 131
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA--GTYGYVAPELAYTMKI 619
IVH D+ N L+ ++ + DFGIA ++P++++ + + GT Y+ PE M
Sbjct: 132 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 620 TEK-----------CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+ + DV+S G ++ GK P F +I+ S L I+DP
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQIS-----KLHAIIDPNHE 242
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
+ EK + +V CL P+ R
Sbjct: 243 IEFPDIPEK--DLQDVLKCCLKRDPKQR 268
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 32/234 (13%)
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
F ++++ H+++V YG C + LV E ++ GSL L + + W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA--------HVADFGIAKFLKP 594
V K +A A+ +L + ++H ++ +KN+LL E + ++D GI+ + P
Sbjct: 117 EVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 595 ESSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL 653
+ +V PE K + D +SFG + E G S+L
Sbjct: 174 KDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK-------PLSAL 222
Query: 654 NTDIALDEILDP-RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
++ L D +LP P + LI+ +C++ P+ RP+ + + + +
Sbjct: 223 DSQRKLQFYEDRHQLPAPKAAELANLIN------NCMDYEPDHRPSFRAIIRDL 270
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS 539
++E EV L ++ H N++ + + L+ EL+ G L L+ + E
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---E 115
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPE 595
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A E
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----E 168
Query: 596 SSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP------RDFLS 646
+ EF +G +VAPE+ + + D++S GV+ + G P ++ L+
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 647 LISSSSLNTD 656
I+S S + D
Sbjct: 229 NITSVSYDFD 238
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 55/295 (18%)
Query: 444 IGNGGHGSVYRA------ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A + + VA+K P + +++ + E+K L+ + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 87
Query: 497 NIVKFYGFCSHARHSFLVYE---------LLERGSLAAILSSDTAA----------QELG 537
NIV G C+ + ++ E L R + I S + A E
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
S V KG+A S +C +H+D++++N+LL + DFG+A+ +K +S+
Sbjct: 148 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 598 NWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS--SSL 653
+ ++APE + T + DV+S+G+ + E SL SS +
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE---------LFSLGSSPYPGM 251
Query: 654 NTDIALDEILDP--RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
D +++ R+ P + E + IM+ +C + P RPT K + Q +
Sbjct: 252 PVDSKFYKMIKEGFRMLSPEHAPAE-MYDIMK---TCWDADPLKRPTFKQIVQLI 302
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--IVKF 501
IG+GG V++ Q+ AIK + +Q D + E+ L +++ + I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 93
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
Y + ++ +Y ++E G++ + S + + +R + K + +A+ +H
Sbjct: 94 YDYEITDQY---IYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 147
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA--GTYGYVAPELAYTMKI 619
IVH D+ N L+ ++ + DFGIA ++P++++ + + GT Y+ PE M
Sbjct: 148 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 620 TEK-----------CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+ + DV+S G ++ GK P F +I+ S L I+DP
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQIS-----KLHAIIDPNHE 258
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
+ EK + +V CL P+ R
Sbjct: 259 IEFPDIPEK--DLQDVLKCCLKRDPKQR 284
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS 539
++E EV L ++ H N++ + + L+ EL+ G L L+ + E
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---E 115
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPE 595
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A E
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----E 168
Query: 596 SSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP------RDFLS 646
+ EF +G +VAPE+ + + D++S GV+ + G P ++ L+
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 647 LISSSSLNTD 656
I+S S + D
Sbjct: 229 NITSVSYDFD 238
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--IVKF 501
IG+GG V++ Q+ AIK + +Q D + E+ L +++ + I++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 73
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
Y + ++ +Y ++E G++ + S + + +R + K + +A+ +H
Sbjct: 74 YDYEITDQY---IYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 127
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA--GTYGYVAPELAYTMKI 619
IVH D+ N L+ ++ + DFGIA ++P++++ + + GT Y+ PE M
Sbjct: 128 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 620 TEK-----------CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+ + DV+S G ++ GK P F +I+ S L I+DP
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQIS-----KLHAIIDPNHE 238
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
+ EK + +V CL P+ R
Sbjct: 239 IEFPDIPEK--DLQDVLKCCLKRDPKQR 264
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS 539
++E EV L ++ H N++ + + L+ EL+ G L L+ + E
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---E 115
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPE 595
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A E
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----E 168
Query: 596 SSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP------RDFLS 646
+ EF +G +VAPE+ + + D++S GV+ + G P ++ L+
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 647 LISSSSLNTD 656
I+S S + D
Sbjct: 229 NITSVSYDFD 238
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 31/188 (16%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKE-----FLIEVKALTEIRHRN 497
IG G G V++A +GQ VA+KK + ++KE L E+K L ++H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 78
Query: 498 IVKFYGFCSHARHSF--------LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVA 549
+V C + LV++ E LA +LS+ L +R V++ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLL 135
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK----PESSNWTEFAGT 605
+ L Y+H + I+H+D+ + N+L+ + +ADFG+A+ + + + T
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 606 YGYVAPEL 613
Y PEL
Sbjct: 193 LWYRPPEL 200
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K + WT GT Y+A
Sbjct: 174 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLA 227
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 31/188 (16%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKE-----FLIEVKALTEIRHRN 497
IG G G V++A +GQ VA+KK + ++KE L E+K L ++H N
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 77
Query: 498 IVKFYGFCSHARHSF--------LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVA 549
+V C + LV++ E LA +LS+ L +R V++ +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLL 134
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK----PESSNWTEFAGT 605
+ L Y+H + I+H+D+ + N+L+ + +ADFG+A+ + + + T
Sbjct: 135 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 606 YGYVAPEL 613
Y PEL
Sbjct: 192 LWYRPPEL 199
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 31/188 (16%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKE-----FLIEVKALTEIRHRN 497
IG G G V++A +GQ VA+KK + ++KE L E+K L ++H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 78
Query: 498 IVKFYGFC-------SHARHS-FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVA 549
+V C + + S +LV++ E LA +LS+ L +R V++ +
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLL 135
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK----PESSNWTEFAGT 605
+ L Y+H + I+H+D+ + N+L+ + +ADFG+A+ + + + T
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 606 YGYVAPEL 613
Y PEL
Sbjct: 193 LWYRPPEL 200
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 55/295 (18%)
Query: 444 IGNGGHGSVYRA------ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A + + VA+K P + +++ + E+K L+ + H
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 105
Query: 497 NIVKFYGFCSHARHSFLVYE---------LLERGSLAAILSSDTAA----------QELG 537
NIV G C+ + ++ E L R + I S + A E
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
S V KG+A S +C +H+D++++N+LL + DFG+A+ +K +S+
Sbjct: 166 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 218
Query: 598 NWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS--SSL 653
+ ++APE + T + DV+S+G+ + E SL SS +
Sbjct: 219 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE---------LFSLGSSPYPGM 269
Query: 654 NTDIALDEILDP--RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
D +++ R+ P + E + IM+ +C + P RPT K + Q +
Sbjct: 270 PVDSKFYKMIKEGFRMLSPEHAPAE-MYDIMK---TCWDADPLKRPTFKQIVQLI 320
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS 539
++E EV L ++ H N++ + + L+ EL+ G L L+ + E
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---E 115
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPE 595
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A E
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----E 168
Query: 596 SSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ EF +G +VAPE+ + + D++S GV+ + G P
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 55/295 (18%)
Query: 444 IGNGGHGSVYRA------ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A + + VA+K P + +++ + E+K L+ + H
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 103
Query: 497 NIVKFYGFCSHARHSFLVYE---------LLERGSLAAILSSDTAA----------QELG 537
NIV G C+ + ++ E L R + I S + A E
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
S V KG+A S +C +H+D++++N+LL + DFG+A+ +K +S+
Sbjct: 164 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
Query: 598 NWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS--SSL 653
+ ++APE + T + DV+S+G+ + E SL SS +
Sbjct: 217 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE---------LFSLGSSPYPGM 267
Query: 654 NTDIALDEILDP--RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
D +++ R+ P + E + IM+ +C + P RPT K + Q +
Sbjct: 268 PVDSKFYKMIKEGFRMLSPEHAPAE-MYDIMK---TCWDADPLKRPTFKQIVQLI 318
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 31/188 (16%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKE-----FLIEVKALTEIRHRN 497
IG G G V++A +GQ VA+KK + ++KE L E+K L ++H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 78
Query: 498 IVKFYGFCSHARHSF--------LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVA 549
+V C + LV++ E LA +LS+ L +R V++ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLL 135
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK----PESSNWTEFAGT 605
+ L Y+H + I+H+D+ + N+L+ + +ADFG+A+ + + + T
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 606 YGYVAPEL 613
Y PEL
Sbjct: 193 LWYRPPEL 200
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 44/289 (15%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 128
Query: 497 NIVKFYGFCSHARHSFLV-YELLERGSLAAILSS-------------DTAAQELGWSQRM 542
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 543 NVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNW 599
VA + +L C +H+D++++N+LL + + DFG+A+ + P+
Sbjct: 189 CYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659
+ ++APE + T + DV+SFGVL+ E SL +S + +
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKI 293
Query: 660 DEILDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
DE RL +R + + + C + P RPT + + +
Sbjct: 294 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 55/295 (18%)
Query: 444 IGNGGHGSVYRA------ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A + + VA+K P + +++ + E+K L+ + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 110
Query: 497 NIVKFYGFCSHARHSFLVYE---------LLERGSLAAILSSDTAA----------QELG 537
NIV G C+ + ++ E L R + I S + A E
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 538 WSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597
S V KG+A S +C +H+D++++N+LL + DFG+A+ +K +S+
Sbjct: 171 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
Query: 598 NWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS--SSL 653
+ ++APE + T + DV+S+G+ + E SL SS +
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE---------LFSLGSSPYPGM 274
Query: 654 NTDIALDEILDP--RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
D +++ R+ P + E + IM+ +C + P RPT K + Q +
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAPAE-MYDIMK---TCWDADPLKRPTFKQIVQLI 325
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS 539
++E EV L ++ H N++ + + L+ EL+ G L L+ + E
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---E 115
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPE 595
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A E
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----E 168
Query: 596 SSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ EF +G +VAPE+ + + D++S GV+ + G P
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 44/289 (15%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 91
Query: 497 NIVKFYGFCSHARHSFLV-YELLERGSLAAILSS-------------DTAAQELGWSQRM 542
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 543 NVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNW 599
VA + +L C +H+D++++N+LL + + DFG+A+ + P+
Sbjct: 152 CYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659
+ ++APE + T + DV+SFGVL+ E SL +S + +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKI 256
Query: 660 DEILDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
DE RL +R + + + C + P RPT + + +
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 41/255 (16%)
Query: 408 SSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIK 466
S ++N +F L + + VY + +R +++ +G+G G V A E + + VAI+
Sbjct: 123 SLSRNKVFVFFDLTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIR 180
Query: 467 KFHSPLPCDQIADQKEFLI--------------EVKALTEIRHRNIVKFYGFCSHARHSF 512
I +++F I E++ L ++ H I+K F A +
Sbjct: 181 ----------IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYY 229
Query: 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572
+V EL+E G L + + +E + ++ + + A+ YLH + I+H+D+ +N
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPEN 283
Query: 573 LLLDLEYE---AHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY---TMKITEKCDVY 626
+LL + E + DFG +K L E+S GT Y+APE+ T D +
Sbjct: 284 VLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 342
Query: 627 SFGVLVLEAIKGKHP 641
S GV++ + G P
Sbjct: 343 SLGVILFICLSGYPP 357
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 41/255 (16%)
Query: 408 SSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIK 466
S ++N +F L + + VY + +R +++ +G+G G V A E + + VAI+
Sbjct: 109 SLSRNKVFVFFDLTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIR 166
Query: 467 KFHSPLPCDQIADQKEFLI--------------EVKALTEIRHRNIVKFYGFCSHARHSF 512
I +++F I E++ L ++ H I+K F A +
Sbjct: 167 ----------IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYY 215
Query: 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572
+V EL+E G L + + +E + ++ + + A+ YLH + I+H+D+ +N
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPEN 269
Query: 573 LLLDLEYE---AHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY---TMKITEKCDVY 626
+LL + E + DFG +K L E+S GT Y+APE+ T D +
Sbjct: 270 VLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 328
Query: 627 SFGVLVLEAIKGKHP 641
S GV++ + G P
Sbjct: 329 SLGVILFICLSGYPP 343
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--IVKF 501
IG+GG V++ Q+ AIK + +Q D + E+ L +++ + I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 121
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
Y + ++ +Y ++E G++ + S + + +R + K + +A+ +H
Sbjct: 122 YDYEITDQY---IYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 175
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA--GTYGYVAPELAYTMKI 619
IVH D+ N L+ ++ + DFGIA ++P++++ + + GT Y+ PE M
Sbjct: 176 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 620 TEK-----------CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+ + DV+S G ++ GK P F +I+ S L I+DP
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQIS-----KLHAIIDPNHE 286
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
+ EK + +V CL P+ R
Sbjct: 287 IEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--IVKF 501
IG+GG V++ Q+ AIK + +Q D + E+ L +++ + I++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 74
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
Y + ++ +Y ++E G++ + S + + +R + K + +A+ +H
Sbjct: 75 YDYEITDQY---IYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 128
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA--GTYGYVAPELAYTMKI 619
IVH D+ N L+ ++ + DFGIA ++P++++ + + GT Y+ PE M
Sbjct: 129 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 620 TEK-----------CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+ + DV+S G ++ GK P F +I+ S L I+DP
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQIS-----KLHAIIDPNHE 239
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
+ EK + +V CL P+ R
Sbjct: 240 IEFPDIPEK--DLQDVLKCCLKRDPKQR 265
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 436 NDFDAQYCIGNGGHGSVYRAELPSG----QVVAIKKFHSPLPCDQIADQKEFLIEVKALT 491
+F+ +G G +G V+ SG ++ A+K + + E + L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 492 EIRHRN--IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKG-V 548
IR + Y F + + L+ + + G L LS +E + + G +
Sbjct: 114 HIRQSPFLVTLHYAFQTETK-LHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEI 168
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK-FLKPESSNWTEFAGTYG 607
AL +LH I+++DI +N+LLD + DFG++K F+ E+ +F GT
Sbjct: 169 VLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 608 YVAPELAY--TMKITEKCDVYSFGVLVLEAIKGKHP 641
Y+AP++ + D +S GVL+ E + G P
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 32/234 (13%)
Query: 483 FLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRM 542
F ++++ H+++V YG C + LV E ++ GSL L + + W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 543 NVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA--------HVADFGIAKFLKP 594
V K +A A+ +L + ++H ++ +KN+LL E + ++D GI+ + P
Sbjct: 117 EVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 595 ESSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL 653
+ +V PE K + D +SFG + E G S+L
Sbjct: 174 KDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK-------PLSAL 222
Query: 654 NTDIALDEILDP-RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706
++ L D +LP P + LI+ +C++ P+ RP+ + + + +
Sbjct: 223 DSQRKLQFYEDRHQLPAPKAAELANLIN------NCMDYEPDHRPSFRAIIRDL 270
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 26/270 (9%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKE-FLIEVKALTE 492
A D +G G G VY + + I D D KE F+ E +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+ H +IVK G ++++ EL G L L + + ++ ++ + A+
Sbjct: 82 LDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAM 138
Query: 553 SYLHH-DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGY 608
+YL +C VH+DI+ +N+L+ + DFG+++++ E ++ + + T +
Sbjct: 139 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIKW 192
Query: 609 VAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667
++PE + T DV+ F V + E + GK P F L + + D + P L
Sbjct: 193 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQP--FFWLENKDVIGVLEKGDRLPKPDL 250
Query: 668 PPPSRSVQEKLISIMEVAFSCLNESPESRP 697
PP L ++M C + P RP
Sbjct: 251 CPPV------LYTLMT---RCWDYDPSDRP 271
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E +E + I +EL S V++ V
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 130
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 131 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 182
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 40/220 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ +G+L L + +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 601 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLVLE 634
+ T ++APE + T + DV+SFGVL+ E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 44/289 (15%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 93
Query: 497 NIVKFYGFCSHARHSFLV-YELLERGSLAAILSS-------------DTAAQELGWSQRM 542
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 543 NVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNW 599
VA + +L C +H+D++++N+LL + + DFG+A+ + P+
Sbjct: 154 CYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659
+ ++APE + T + DV+SFGVL+ E SL +S + +
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKI 258
Query: 660 DEILDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
DE RL +R + + + C + P RPT + + +
Sbjct: 259 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 92
Query: 497 NIVKFYGFCSHARHSFLV-YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
N+V G C+ +V E + G+L+ L S + + + ++ K D L+
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS-KRNEFVPYKTPEDLYK---DFLTLE 148
Query: 556 HHDCFP-------------PIVHQDISSKNLLLDLEYEAHVADFGIAKFL--KPESSNWT 600
H C+ +H+D++++N+LL + + DFG+A+ + P+
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 601 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660
+ ++APE + T + DV+SFGVL+ E SL +S + +D
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKID 257
Query: 661 EILDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
E RL +R + + + C + P RPT + + +
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 40/286 (13%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 93
Query: 497 NIVKFYGFCSHARHSFLV-YELLERGSLAAILSS-----------DTAAQELGWSQRMNV 544
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 545 IKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL--KPESSNWTEF 602
VA + +L +H+D++++N+LL + + DFG+A+ + P+ +
Sbjct: 154 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 603 AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662
++APE + T + DV+SFGVL+ E SL +S + +DE
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKIDEE 259
Query: 663 LDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
RL +R + + + C + P RPT + + +
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 26/270 (9%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKE-FLIEVKALTE 492
A D +G G G VY + + I D D KE F+ E +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+ H +IVK G ++++ EL G L L + + ++ ++ + A+
Sbjct: 70 LDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAM 126
Query: 553 SYLHH-DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGY 608
+YL +C VH+DI+ +N+L+ + DFG+++++ E ++ + + T +
Sbjct: 127 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIKW 180
Query: 609 VAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667
++PE + T DV+ F V + E + GK P F L + + D + P L
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQP--FFWLENKDVIGVLEKGDRLPKPDL 238
Query: 668 PPPSRSVQEKLISIMEVAFSCLNESPESRP 697
PP L ++M C + P RP
Sbjct: 239 CPPV------LYTLMT---RCWDYDPSDRP 259
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G G V++ E +G +A K + + D++E E+ + ++ H N+++ Y
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAK----IIKTRGMKDKEEVKNEISVMNQLDHANLIQLY 152
Query: 503 GFCSHARHSFLVYELLERGSL-AAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
LV E ++ G L I+ EL + +K + + + ++H
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL---DTILFMKQICEGIRHMHQ---M 206
Query: 562 PIVHQDISSKNLLL---DLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK 618
I+H D+ +N+L D + + + DFG+A+ KP F GT ++APE+
Sbjct: 207 YILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDF 264
Query: 619 ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIA 658
++ D++S GV+ + G P FL + +LN +A
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSP--FLGDNDAETLNNILA 302
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 44/289 (15%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 91
Query: 497 NIVKFYGFCSHARHSFLV-YELLERGSLAAILSS-------------DTAAQELGWSQRM 542
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 543 NVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNW 599
VA + +L C +H+D++++N+LL + + DFG+A+ + P+
Sbjct: 152 CYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659
+ ++APE + T + DV+SFGVL+ E SL +S + +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKI 256
Query: 660 DEILDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
DE RL +R + + + C + P RPT + + +
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 44/289 (15%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 82
Query: 497 NIVKFYGFCSHARHSFLVY-ELLERGSLAAILSS-------------DTAAQELGWSQRM 542
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 543 NVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNW 599
VA + +L C +H+D++++N+LL + + DFG+A+ + P+
Sbjct: 143 CYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659
+ ++APE + T + DV+SFGVL+ E SL +S + +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKI 247
Query: 660 DEILDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
DE RL +R + + + C + P RPT + + +
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K WT GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 480 QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS 539
++E EV L ++ H NI+ + + L+ EL+ G L L+ + E
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---E 115
Query: 540 QRMNVIKGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPE 595
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A E
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----E 168
Query: 596 SSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ EF +G +VAPE+ + + D++S GV+ + G P
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--IVKF 501
IG+GG V++ Q+ AIK + +Q D + E+ L +++ + I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 121
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
Y + ++ +Y ++E G++ + S + + +R + K + +A+ +H
Sbjct: 122 YDYEITDQY---IYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 175
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA--GTYGYVAPELAYTMKI 619
IVH D+ N L+ ++ + DFGIA ++P++++ + + GT Y+ PE M
Sbjct: 176 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 620 TEK-----------CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+ + DV+S G ++ GK P F +I+ S L I+DP
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQIS-----KLHAIIDPNHE 286
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
+ EK + +V CL P+ R
Sbjct: 287 IEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K WT GT Y+A
Sbjct: 139 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLA 192
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 44/289 (15%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 82
Query: 497 NIVKFYGFCSHARHSFLVY-ELLERGSLAAILSS-------------DTAAQELGWSQRM 542
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 543 NVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNW 599
VA + +L C +H+D++++N+LL + + DFG+A+ + P+
Sbjct: 143 CYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659
+ ++APE + T + DV+SFGVL+ E SL +S + +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKI 247
Query: 660 DEILDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
DE RL +R + + + C + P RPT + + +
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 26/270 (9%)
Query: 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKE-FLIEVKALTE 492
A D +G G G VY + + I D D KE F+ E +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+ H +IVK G ++++ EL G L L + + ++ ++ + A+
Sbjct: 66 LDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAM 122
Query: 553 SYLHH-DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT---YGY 608
+YL +C VH+DI+ +N+L+ + DFG+++++ E ++ + + T +
Sbjct: 123 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIKW 176
Query: 609 VAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667
++PE + T DV+ F V + E + GK P F L + + D + P L
Sbjct: 177 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQP--FFWLENKDVIGVLEKGDRLPKPDL 234
Query: 668 PPPSRSVQEKLISIMEVAFSCLNESPESRP 697
PP L ++M C + P RP
Sbjct: 235 CPPV------LYTLMT---RCWDYDPSDRP 255
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W AGT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 40/220 (18%)
Query: 444 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-R 494
+G G G V AE P V VA+K ++D + E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 495 HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQR 541
H+NI+ G C+ +++ +G+L L + +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 542 MNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600
++ +A + YL C +H+D++++N+L+ +ADFG+A+ + +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 601 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLVLE 634
+ T ++APE + T + DV+SFGVL+ E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKXVNHKNIIS 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 44/289 (15%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 91
Query: 497 NIVKFYGFCSHARHSFLV-YELLERGSLAAILSS-------------DTAAQELGWSQRM 542
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 543 NVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL--KPESSNW 599
VA + +L C +H+D++++N+LL + + DFG+A+ + P+
Sbjct: 152 CYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659
+ ++APE + T + DV+SFGVL+ E SL +S + +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKI 256
Query: 660 DEILDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
DE RL +R + + + C + P RPT + + +
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 3 SLSILDLNQN--QFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTR-PGLDFN 59
SL LDL++N FKG S T+LK L L +N G I S L + LDF
Sbjct: 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN---GVITMSSNFLGLEQLEHLDFQ 404
Query: 60 H--------FTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTG 111
H F+ +L L Y +S H + I SSL +++ N+
Sbjct: 405 HSNLKQMSEFSVFLSLR-----NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 459
Query: 112 N-ISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNI--TGGIPREIGNS 168
N + + NLTF+DLS+ + + L LN+S NN P + NS
Sbjct: 460 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 519
Query: 169 SQLQALDLSLNHIVGEIPKELGKL-NSLTELILRGNQF 205
LQ LD SLNHI+ +EL +SL L L N F
Sbjct: 520 --LQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 555
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 120 YPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLN 179
+P L +DLSR + + L TL ++ N I S LQ L
Sbjct: 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110
Query: 180 HIVGEIPKELGKLNSLTELILRGNQFTG-RLPPEIGSLVDLEYLDLSANR 228
++ +G L +L EL + N +LP +L +LE+LDLS+N+
Sbjct: 111 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 283 FQICSLKSLEKLNLSHNNL-SGSIPNCFEGIRGISVIDISDNQLQG 327
F I LK+L++LN++HN + S +P F + + +D+S N++Q
Sbjct: 118 FPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 62/164 (37%), Gaps = 29/164 (17%)
Query: 98 SLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRN--DFYGEISSNWGKCPKLGTLNVSMN 155
SL R+ SN SE P+L F+DLSRN F G S + L L++S N
Sbjct: 326 SLKRLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN 383
Query: 156 NITGGIPREIG------------NSSQLQA------------LDLSLNHIVGEIPKELGK 191
+ +G N Q+ LD+S H
Sbjct: 384 GVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 443
Query: 192 LNSLTELILRGNQFTGRLPPEIGS-LVDLEYLDLSANRFNNSVP 234
L+SL L + GN F P+I + L +L +LDLS + P
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 444 IGNGGHGSVYRAELP--SGQVVAIKKFHSPLPCDQIADQKEFLI-EVKALTEI-RHRNIV 499
+G+G G V A S V+I+ L + ++E L+ E+K +T++ H NIV
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 500 KFYGFCSHARHSFLVYELLERGSLAAILSSDTAA-----------QELGWSQRMNVIK-- 546
G C+ + +L++E G L L S + L + +NV+
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 547 -------GVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599
VA + +L F VH+D++++N+L+ + DFG+A+ + +S+
Sbjct: 173 DLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 600 TEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLVLE 634
++APE + T K DV+S+G+L+ E
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE 266
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + ++K + +A+ YLH I H+D+ +
Sbjct: 89 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S TE T YVAPE+ K + CD++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 629 GVLVLEAIKGKHP 641
GV++ + G P
Sbjct: 204 GVIMYILLCGYPP 216
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKVVNHKNIIG 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L+ ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLVGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S G ++ E IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 44/289 (15%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 82
Query: 497 NIVKFYGFCSHARHSFLVY-ELLERGSLAAILSS-------------DTAAQELGWSQRM 542
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 543 NVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL--KPESSNW 599
VA + +L C +H+D++++N+LL + + DFG+A+ + P+
Sbjct: 143 CYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659
+ ++APE + T + DV+SFGVL+ E SL +S + +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKI 247
Query: 660 DEILDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
DE RL +R + + + C + P RPT + + +
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + ++K + +A+ YLH I H+D+ +
Sbjct: 105 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 160
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S T Y YVAPE+ K + CD++S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 219
Query: 629 GVLVLEAIKGKHP 641
GV++ + G P
Sbjct: 220 GVIMYILLCGYPP 232
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 41/236 (17%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI 485
VY + +R +++ +G+G G V A E + + VAIK I +++F I
Sbjct: 9 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIK----------IISKRKFAI 56
Query: 486 --------------EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDT 531
E++ L ++ H I+K F A ++V EL+E G L + +
Sbjct: 57 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK 115
Query: 532 AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGI 588
+E + ++ + + A+ YLH + I+H+D+ +N+LL + E + DFG
Sbjct: 116 RLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 169
Query: 589 AKFLKPESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHP 641
+K L E+S GT Y+APE+ T D +S GV++ + G P
Sbjct: 170 SKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 44/289 (15%)
Query: 444 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHR 496
+G G G V A+ + + VA+K ++ + + E+K L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHL 82
Query: 497 NIVKFYGFCSHARHSFLV-YELLERGSLAAILSS-------------DTAAQELGWSQRM 542
N+V G C+ +V E + G+L+ L S D L +
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 543 NVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL--KPESSNW 599
VA + +L C +H+D++++N+LL + + DFG+A+ + P+
Sbjct: 143 CYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659
+ ++APE + T + DV+SFGVL+ E SL +S + +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE---------IFSL--GASPYPGVKI 247
Query: 660 DEILDPRLPPPSRSVQEKLIS--IMEVAFSCLNESPESRPTMKVVTQQV 706
DE RL +R + + + C + P RPT + + +
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + VADFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + VADFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKVVNHKNIIG 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L+ ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLCGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S G ++ E IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + VADFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + VADFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 481 KEFLIEVKALTEIRHRNIVKFYGFCSH--ARHSFLVYELLERGSLAAILSSDTAAQELGW 538
++F E L H N++ G C A H L+ + GSL +L T +
Sbjct: 52 RDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFV-VDQ 110
Query: 539 SQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHV--ADFGIAKFLKPES 596
SQ + +A +++LH P I ++S+++++D + A + AD + F P
Sbjct: 111 SQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS-FQSPGR 168
Query: 597 SNWTEFAGTYGYVAPE-LAYTMKITEK--CDVYSFGVLVLEAIKGKHPRDFLSLISSSSL 653
+VAPE L + T + D++SF VL+ E + + P + +S+ +
Sbjct: 169 ------MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP---FADLSNMEI 219
Query: 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVT 703
+AL E L P +PP KL+ I C+NE P RP ++
Sbjct: 220 GMKVAL-EGLRPTIPPGISPHVSKLMKI------CMNEDPAKRPKFDMIV 262
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKXVNHKNIIS 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 41/236 (17%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI 485
VY + +R +++ +G+G G V A E + + VAIK I +++F I
Sbjct: 3 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIK----------IISKRKFAI 50
Query: 486 --------------EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDT 531
E++ L ++ H I+K F A ++V EL+E G L + +
Sbjct: 51 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK 109
Query: 532 AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGI 588
+E + ++ + + A+ YLH + I+H+D+ +N+LL + E + DFG
Sbjct: 110 RLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 589 AKFLKPESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHP 641
+K L E+S GT Y+APE+ T D +S GV++ + G P
Sbjct: 164 SKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 41/236 (17%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI 485
VY + +R +++ +G+G G V A E + + VAIK I +++F I
Sbjct: 3 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIK----------IISKRKFAI 50
Query: 486 --------------EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDT 531
E++ L ++ H I+K F A ++V EL+E G L + +
Sbjct: 51 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK 109
Query: 532 AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGI 588
+E + ++ + + A+ YLH + I+H+D+ +N+LL + E + DFG
Sbjct: 110 RLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 589 AKFLKPESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHP 641
+K L E+S GT Y+APE+ T D +S GV++ + G P
Sbjct: 164 SKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + ++K + +A+ YLH I H+D+ +
Sbjct: 97 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 152
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S T Y YVAPE+ K + CD++S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 211
Query: 629 GVLVLEAIKGKHP 641
GV++ + G P
Sbjct: 212 GVIMYILLCGYPP 224
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 432 VRATNDFDAQY----CIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL-- 484
++ ++QY +G+GG GSVY S + VAIK D+I+D E
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNG 56
Query: 485 ----IEVKALTEIRH--RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQEL 536
+EV L ++ +++ + L+ E E + I +EL
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPE 595
S V++ V H+C ++H+DI +N+L+DL E + DFG LK
Sbjct: 117 ARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-- 167
Query: 596 SSNWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ +T+F GT Y PE + Y V+S G+L+ + + G P
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 497 NIVKFYGFCSHARHSFL-VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL 555
IV Y R L V E L+ G L + + D Q + ++K + +A+ YL
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYL 177
Query: 556 HHDCFPPIVHQDISSKNLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPE 612
H I H+D+ +NLL + + DFG AK +S T Y YVAPE
Sbjct: 178 HS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPE 233
Query: 613 LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ K + CD++S GV++ + G P
Sbjct: 234 VLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 432 VRATNDFDAQY----CIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL-- 484
++ ++QY +G+GG GSVY S + VAIK D+I+D E
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNG 78
Query: 485 ----IEVKALTEIR--HRNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQEL 536
+EV L ++ +++ + L+ E E + I +EL
Sbjct: 79 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 138
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPE 595
S V++ V H+C ++H+DI +N+L+DL E + DFG LK
Sbjct: 139 ARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-- 189
Query: 596 SSNWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ +T+F GT Y PE + Y V+S G+L+ + + G P
Sbjct: 190 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 41/236 (17%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI 485
VY + +R +++ +G+G G V A E + + VAIK I +++F I
Sbjct: 2 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIK----------IISKRKFAI 49
Query: 486 --------------EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDT 531
E++ L ++ H I+K F A ++V EL+E G L + +
Sbjct: 50 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK 108
Query: 532 AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGI 588
+E + ++ + + A+ YLH + I+H+D+ +N+LL + E + DFG
Sbjct: 109 RLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 162
Query: 589 AKFLKPESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHP 641
+K L E+S GT Y+APE+ T D +S GV++ + G P
Sbjct: 163 SKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + ++K + +A+ YLH I H+D+ +
Sbjct: 96 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 151
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S T Y YVAPE+ K + CD++S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 210
Query: 629 GVLVLEAIKGKHP 641
GV++ + G P
Sbjct: 211 GVIMYILLCGYPP 223
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 34/268 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--IVKF 501
IG+GG V++ Q+ AIK + +Q D + E+ L +++ + I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 93
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
Y + ++ +Y ++E G++ + S + + +R + K + +A+ +H
Sbjct: 94 YDYEITDQY---IYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 147
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA--GTYGYVAPELAYTMKI 619
IVH D+ N L+ ++ + DFGIA ++P+ + + GT Y+ PE M
Sbjct: 148 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 620 TEK-----------CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+ + DV+S G ++ GK P F +I+ S L I+DP
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQIS-----KLHAIIDPNHE 258
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
+ EK + +V CL P+ R
Sbjct: 259 IEFPDIPEK--DLQDVLKCCLKRDPKQR 284
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + ++K + +A+ YLH I H+D+ +
Sbjct: 95 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 150
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S T Y YVAPE+ K + CD++S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 209
Query: 629 GVLVLEAIKGKHP 641
GV++ + G P
Sbjct: 210 GVIMYILLCGYPP 222
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 159
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 160 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 211
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 158
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 159 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 210
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 173
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 174 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 225
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 159
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 160 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 211
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
IG+G G V A + G VA+KK P A K E+ L + H+NI+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA--KRAYRELVLLKCVNHKNIISLL 87
Query: 503 GFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH 556
+ + +LV EL++ +L ++ + + + + ++ + + +LH
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIHMELDHERMSY-----LLYQMLCGIKHLH 141
Query: 557 HDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW--TEFAGTYGYVAPELA 614
I+H+D+ N+++ + + DFG+A+ S+N+ T + T Y APE+
Sbjct: 142 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVI 195
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S G ++ E +KG
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 159
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 160 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 211
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 41/236 (17%)
Query: 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLI 485
VY + +R +++ +G+G G V A E + + VAIK I +++F I
Sbjct: 3 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIK----------IISKRKFAI 50
Query: 486 --------------EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDT 531
E++ L ++ H I+K F A ++V EL+E G L + +
Sbjct: 51 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK 109
Query: 532 AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGI 588
+E + ++ + + A+ YLH + I+H+D+ +N+LL + E + DFG
Sbjct: 110 RLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 589 AKFLKPESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHP 641
+K L E+S GT Y+APE+ T D +S GV++ + G P
Sbjct: 164 SKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + ++K + +A+ YLH I H+D+ +
Sbjct: 90 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 145
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S T Y YVAPE+ K + CD++S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 204
Query: 629 GVLVLEAIKGKHP 641
GV++ + G P
Sbjct: 205 GVIMYILLCGYPP 217
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + ++K + +A+ YLH I H+D+ +
Sbjct: 141 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 196
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S T Y YVAPE+ K + CD++S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 255
Query: 629 GVLVLEAIKGKHP 641
GV++ + G P
Sbjct: 256 GVIMYILLCGYPP 268
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 119
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 120 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 178
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 179 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 230
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 158
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 159 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 210
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 159
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 160 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 211
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKXVNHKNIIS 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLCGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + ++K + +A+ YLH I H+D+ +
Sbjct: 89 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 144
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S T Y YVAPE+ K + CD++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 203
Query: 629 GVLVLEAIKGKHP 641
GV++ + G P
Sbjct: 204 GVIMYILLCGYPP 216
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 173
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 174 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 225
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 158
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 159 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 210
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIG 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L+ ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLCGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S G ++ E IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 145
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 146 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 197
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 22/172 (12%)
Query: 486 EVKALTEIR-HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNV 544
EV+ L + + ++NI++ F +LV+E L+ GS+ A + E + V
Sbjct: 60 EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNE---REASRV 116
Query: 545 IKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGIAKFLKPESS---- 597
++ VA AL +LH I H+D+ +N+L + + + DF + +K +S
Sbjct: 117 VRDVAAALDFLHT---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPI 173
Query: 598 ---NWTEFAGTYGYVAPEL--AYTMKIT---EKCDVYSFGVLVLEAIKGKHP 641
T G+ Y+APE+ +T + T ++CD++S GV++ + G P
Sbjct: 174 TTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 146
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 147 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 198
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + ++K + +A+ YLH I H+D+ +
Sbjct: 91 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S T Y YVAPE+ K + CD++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 205
Query: 629 GVLVLEAIKGKHP 641
GV++ + G P
Sbjct: 206 GVIMYILLCGYPP 218
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 158
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 159 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 210
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 9/201 (4%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
+G G G V A Q KF S + E+ L +RH +I+K Y
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
+ +V E I+ ++ G + + A+ Y H I
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG----RRFFQQIICAIEYCHRH---KI 129
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY-TMKITEK 622
VH+D+ +NLLLD +ADFG++ + + + G+ Y APE+ + +
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVINGKLYAGPE 188
Query: 623 CDVYSFGVLVLEAIKGKHPRD 643
DV+S G+++ + G+ P D
Sbjct: 189 VDVWSCGIVLYVMLVGRLPFD 209
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + ++K + +A+ YLH I H+D+ +
Sbjct: 91 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S T Y YVAPE+ K + CD++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 205
Query: 629 GVLVLEAIKGKHP 641
GV++ + G P
Sbjct: 206 GVIMYILLCGYPP 218
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 432 VRATNDFDAQY----CIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL-- 484
++ ++QY +G+GG GSVY S + VAIK D+I+D E
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNG 56
Query: 485 ----IEVKALTEIRH--RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQEL 536
+EV L ++ +++ + L+ E E + I +EL
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPE 595
S V++ V H+C ++H+DI +N+L+DL E + DFG LK
Sbjct: 117 ARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-- 167
Query: 596 SSNWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ +T+F GT Y PE + Y V+S G+L+ + + G P
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 106
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 165
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 166 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 217
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 145
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 146 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 197
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 80
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKH 134
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 190
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIG 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L+ ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLCGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S G ++ E IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 146
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 147 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 198
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 130
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 131 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 182
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIR-- 494
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 495 HRNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 126
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 127 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 178
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIR-- 494
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 495 HRNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 126
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 127 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 178
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIG 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S G ++ E IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 444 IGNGGHGSVYRAELP-SGQVVAIKKFH----SPLPCDQIADQKEFLIEVKALTEIRHRNI 498
+G G + +VY+ + + +VA+K+ PC I EV L +++H NI
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-------EVSLLKDLKHANI 62
Query: 499 VKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
V + + LV+E L++ L L D + + + L+Y H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYL--DDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAYTM 617
++H+D+ +NLL++ E +ADFG+A+ + + T Y P+ L +
Sbjct: 120 ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 618 KITEKCDVYSFGVLVLEAIKGK 639
+ + D++ G + E G+
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGR 198
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIRH- 495
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 496 -RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 146
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 147 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 198
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIG 88
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L ++ + + + + ++ + + +
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 142
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 143 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 198
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S G ++ E IKG
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 432 VRATNDFDAQY----CIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL-- 484
++ ++QY +G+GG GSVY S + VAIK D+I+D E
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNG 56
Query: 485 ----IEVKALTEIRH--RNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQEL 536
+EV L ++ +++ + L+ E E + I +EL
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPE 595
S V++ V H+C ++H+DI +N+L+DL E + DFG LK
Sbjct: 117 ARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-- 167
Query: 596 SSNWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
+ +T+F GT Y PE + Y V+S G+L+ + + G P
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIR-- 494
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 70
Query: 495 HRNIVKFYGFCSHARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552
+++ + L+ E E + I +EL S V++ V
Sbjct: 71 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 129
Query: 553 SYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAP 611
H+C ++H+DI +N+L+DL E + DFG LK + +T+F GT Y P
Sbjct: 130 ----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPP 181
Query: 612 E-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
E + Y V+S G+L+ + + G P
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIG 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S G ++ E IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIG 89
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L ++ + + + + ++ + + +
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 143
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S F T Y APE+
Sbjct: 144 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMVPFVVTRYYRAPEVI 199
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S G ++ E IKG
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 174 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 227
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 174 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 227
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 148 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 201
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G GG+G V+ A + + VAIKK P K L E+K + + H NIVK +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP----QSVKHALREIKIIRRLDHDNIVKVF 74
Query: 503 --------------GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGV 548
G + ++V E +E LA +L +E +++G
Sbjct: 75 EILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQLLRG- 132
Query: 549 ADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVADFGIAKFLKPESS---NWTEFAG 604
L Y+H ++H+D+ NL ++ E + DFG+A+ + P S + +E
Sbjct: 133 ---LKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 605 TYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGK 639
T Y +P L + T+ D+++ G + E + GK
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 34/268 (12%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--IVKF 501
IG+GG V++ Q+ AIK + +Q D + E+ L +++ + I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 121
Query: 502 YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFP 561
Y + ++ +Y ++E G++ + S + + +R + K + +A+ +H
Sbjct: 122 YDYEITDQY---IYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 175
Query: 562 PIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFA--GTYGYVAPELAYTMKI 619
IVH D+ N L+ ++ + DFGIA ++P++++ + + G Y+ PE M
Sbjct: 176 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 620 TEK-----------CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668
+ + DV+S G ++ GK P F +I+ S L I+DP
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQIS-----KLHAIIDPNHE 286
Query: 669 PPSRSVQEKLISIMEVAFSCLNESPESR 696
+ EK + +V CL P+ R
Sbjct: 287 IEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 146 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 199
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 146 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 199
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NL++D + V DFG+AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 3 SLSILDLNQN--QFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTR-PGLDFN 59
SL LDL++N FKG S +LK L L +N G I S L + LDF
Sbjct: 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFN---GVITMSSNFLGLEQLEHLDFQ 428
Query: 60 H--------FTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTG 111
H F+ +L L Y +S H + I SSL +++ N+
Sbjct: 429 HSNLKQMSEFSVFLSLR-----NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 483
Query: 112 N-ISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNI--TGGIPREIGNS 168
N + + NLTF+DLS+ + + L LN+S NN P + NS
Sbjct: 484 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 543
Query: 169 SQLQALDLSLNHIVGEIPKELGKL-NSLTELILRGNQF 205
LQ LD SLNHI+ +EL +SL L L N F
Sbjct: 544 --LQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 120 YPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLN 179
+P L +DLSR + + L TL ++ N I S LQ L
Sbjct: 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 134
Query: 180 HIVGEIPKELGKLNSLTELILRGNQFTG-RLPPEIGSLVDLEYLDLSANR 228
++ +G L +L EL + N +LP +L +LE+LDLS+N+
Sbjct: 135 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 184
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 283 FQICSLKSLEKLNLSHNNL-SGSIPNCFEGIRGISVIDISDNQLQG 327
F I LK+L++LN++HN + S +P F + + +D+S N++Q
Sbjct: 142 FPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 62/164 (37%), Gaps = 29/164 (17%)
Query: 98 SLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRN--DFYGEISSNWGKCPKLGTLNVSMN 155
SL R+ SN SE P+L F+DLSRN F G S + L L++S N
Sbjct: 350 SLKRLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFN 407
Query: 156 NITGGIPREIG------------NSSQLQA------------LDLSLNHIVGEIPKELGK 191
+ +G N Q+ LD+S H
Sbjct: 408 GVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 467
Query: 192 LNSLTELILRGNQFTGRLPPEIGS-LVDLEYLDLSANRFNNSVP 234
L+SL L + GN F P+I + L +L +LDLS + P
Sbjct: 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 511
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 140 TFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 193
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 125
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 179
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 180 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 235
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 444 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKF 501
+ GG VY A+ + SG+ A+K+ S ++ + + EV + ++ H NIV+F
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLS----NEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 502 YGFCSHA----------RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADA 551
CS A + FL+ L +G L L + L + + A
Sbjct: 92 ---CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 552 LSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK--PESSNWTEFA------ 603
+ ++H PPI+H+D+ +NLLL + + DFG A + P+ S W+
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS-WSAQRRALVEE 206
Query: 604 -----GTYGYVAPE---LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
T Y PE L I EK D+++ G ++ +HP
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 88
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 142
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 143 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 198
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A + + +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKN 176
Query: 602 FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
GT +VAPE+ + + D++S GV+ + G P
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 88
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 142
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 143 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 198
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 42/225 (18%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
NDF IG GG G VY + +G++ A+K D+K ++ +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----------CLDKKRIKMKQGETLALN 237
Query: 495 HRNIVKF-------------YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS-Q 540
R ++ Y F + + SF++ +L+ G L LS E
Sbjct: 238 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 296
Query: 541 RMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA---KFLKPESS 597
+I G L ++H+ +V++D+ N+LLD ++D G+A KP +S
Sbjct: 297 AAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 349
Query: 598 NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
GT+GY+APE L + D +S G ++ + ++G P
Sbjct: 350 -----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 86
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 140
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 141 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 196
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 80
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 134
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 135 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 190
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 42/225 (18%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
NDF IG GG G VY + +G++ A+K D+K ++ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----------CLDKKRIKMKQGETLALN 238
Query: 495 HRNIVKF-------------YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS-Q 540
R ++ Y F + + SF++ +L+ G L LS E
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 541 RMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA---KFLKPESS 597
+I G L ++H+ +V++D+ N+LLD ++D G+A KP +S
Sbjct: 298 AAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 598 NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
GT+GY+APE L + D +S G ++ + ++G P
Sbjct: 351 -----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 24/217 (11%)
Query: 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
ND + +G+G G V++ +G V+A+K+ + K L+++ + +
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRR---SGNKEENKRILMDLDVVLKSH 81
Query: 495 H-RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAA----QELGWSQRMNVIKGVA 549
IV+ +G F+ EL+ G+ A L + LG +M V +
Sbjct: 82 DCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILG---KMTV--AIV 134
Query: 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYV 609
AL YL ++H+D+ N+LLD + + DFGI+ L + + AG Y+
Sbjct: 135 KALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK-DRSAGCAAYM 191
Query: 610 APELAYTMKITE-----KCDVYSFGVLVLEAIKGKHP 641
APE T+ + DV+S G+ ++E G+ P
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NL++D + V DFG+AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 81
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 135
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 136 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 191
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 81
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 135
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 136 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 191
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIS 125
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + +LV EL++ +L ++ + + + + ++ + + +
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 179
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 180 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 235
Query: 615 YTMKITEKCDVYSFGVLVLEAIKGK 639
M E D++S G ++ E ++ K
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D++++N+LL + + DFG+A+ + P+ + ++APE + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 622 KCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS- 680
+ DV+SFGVL+ E SL +S + +DE RL +R +
Sbjct: 273 QSDVWSFGVLLWE---------IFSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP 321
Query: 681 -IMEVAFSCLNESPESRPTMKVVTQQV 706
+ + C + P RPT + + +
Sbjct: 322 EMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 42/225 (18%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
NDF IG GG G VY + +G++ A+K D+K ++ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----------CLDKKRIKMKQGETLALN 238
Query: 495 HRNIVKF-------------YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS-Q 540
R ++ Y F + + SF++ +L+ G L LS E
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 541 RMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA---KFLKPESS 597
+I G L ++H+ +V++D+ N+LLD ++D G+A KP +S
Sbjct: 298 AAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 598 NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
GT+GY+APE L + D +S G ++ + ++G P
Sbjct: 351 -----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 42/225 (18%)
Query: 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR 494
NDF IG GG G VY + +G++ A+K D+K ++ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----------CLDKKRIKMKQGETLALN 238
Query: 495 HRNIVKF-------------YGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWS-Q 540
R ++ Y F + + SF++ +L+ G L LS E
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 541 RMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA---KFLKPESS 597
+I G L ++H+ +V++D+ N+LLD ++D G+A KP +S
Sbjct: 298 AAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 598 NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
GT+GY+APE L + D +S G ++ + ++G P
Sbjct: 351 -----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D++++N+LL + + DFG+A+ + P+ + ++APE + T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 622 KCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS- 680
+ DV+SFGVL+ E SL +S + +DE RL +R +
Sbjct: 280 QSDVWSFGVLLWE---------IFSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP 328
Query: 681 -IMEVAFSCLNESPESRPTMKVVTQQV 706
+ + C + P RPT + + +
Sbjct: 329 EMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D++++N+LL + + DFG+A+ + P+ + ++APE + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 622 KCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS- 680
+ DV+SFGVL+ E SL +S + +DE RL +R +
Sbjct: 282 QSDVWSFGVLLWE---------IFSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP 330
Query: 681 -IMEVAFSCLNESPESRPTMKVVTQQV 706
+ + C + P RPT + + +
Sbjct: 331 EMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D++++N+LL + + DFG+A+ + P+ + ++APE + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 622 KCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS- 680
+ DV+SFGVL+ E SL +S + +DE RL +R +
Sbjct: 275 QSDVWSFGVLLWE---------IFSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP 323
Query: 681 -IMEVAFSCLNESPESRPTMKVVTQQV 706
+ + C + P RPT + + +
Sbjct: 324 EMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571
+V E L+ G L + + D Q + + K + +A+ YLH I H+D+ +
Sbjct: 135 LIVXECLDGGELFSRIQ-DRGDQAFTEREASEIXKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 572 NLLLDLEYEAHV---ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628
NLL + + DFG AK +S T Y YVAPE+ K + CD +S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWSL 249
Query: 629 GVL 631
GV+
Sbjct: 250 GVI 252
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 44/220 (20%)
Query: 444 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPCDQIADQKEFL------IEVKALTEIR-- 494
+G+GG GSVY S + VAIK D+I+D E +EV L ++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEK----DRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 495 HRNIVKFYGFCSHARHSFLVYE-----------LLERGSLAAILSSDTAAQELGWSQRMN 543
+++ + L+ E + ERG+L L A+ W
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-----ARSFFWQ---- 118
Query: 544 VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPESSNWTEF 602
V +A+ + H+ ++H+DI +N+L+DL E + DFG LK + +T+F
Sbjct: 119 ----VLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF 169
Query: 603 AGTYGYVAPE-LAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
GT Y PE + Y V+S G+L+ + + G P
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502
+G G +G VY+A + + + VAIK+ L ++ + EV L E++HRNI++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIR--LEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH-HDCFP 561
H L++E E + + + + S +I GV ++ H C
Sbjct: 100 SVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGV----NFCHSRRC-- 153
Query: 562 PIVHQDISSKNLLLDLEYEAH-----VADFGIAKFLKPESSNWTEFAGTYGYVAPE-LAY 615
+H+D+ +NLLL + + + DFG+A+ +T T Y PE L
Sbjct: 154 --LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG 211
Query: 616 TMKITEKCDVYSFGVLVLEAI 636
+ + D++S + E +
Sbjct: 212 SRHYSTSVDIWSIACIWAEML 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503
IG G G VY G+V AI+ + D K F EV A + RH N+V F G
Sbjct: 41 IGKGRFGQVYHGRW-HGEV-AIRLI--DIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563
C H ++ L + +L +++ ++ ++ + + + + YLH I
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDV--NKTRQIAQEIVKGMGYLHAKG---I 151
Query: 564 VHQDISSKNLLLDLEYEAHVADFGI 588
+H+D+ SKN+ D + + DFG+
Sbjct: 152 LHKDLKSKNVFYD-NGKVVITDFGL 175
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ + G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 119
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 120 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 172
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 173 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
PE+ + + D ++ GVL+ E G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 444 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500
IG+G G V Y A L VAIKK P A K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHA--KRAYRELVLMKCVNHKNIIG 87
Query: 501 FYGFCSHAR------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY 554
+ + ++V EL++ +L ++ + + + + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKH 141
Query: 555 LHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA 614
LH I+H+D+ N+++ + + DFG+A+ E Y Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-YRAPEVI 197
Query: 615 YTMKITEKCDVYSFGVLVLEAIKG 638
M E D++S G ++ E IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 31/267 (11%)
Query: 444 IGNGGHGSVYRA---ELPSGQVVAIKKFHSPLPCDQIADQK--EFLIEVKALTEIRHRNI 498
+G+G G V+ A E VV K L I D K + +E+ L+ + H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 499 VKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD 558
+K + LV E + GS + + L + + + A+ YL
Sbjct: 92 IKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR-- 147
Query: 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK 618
I+H+DI +N+++ ++ + DFG A +L+ +T F GT Y APE+
Sbjct: 148 -LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FCGTIEYCAPEVLMGNP 205
Query: 619 IT-EKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677
+ +++S GV + + ++P L+E ++ + PP +E
Sbjct: 206 YRGPELEMWSLGVTLYTLVFEENPF--------------CELEETVEAAIHPPYLVSKE- 250
Query: 678 LISIMEVAFSCLNESPESRPTM-KVVT 703
+M + L PE R T+ K+VT
Sbjct: 251 ---LMSLVSGLLQPVPERRTTLEKLVT 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 119
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 120 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 172
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 173 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 486 EVKALTEIRHRNIVKFYG--FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMN 543
E++ L +RH+N+++ + + ++V E G + +L S + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDS-VPEKRFPVCQAHG 113
Query: 544 VIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT--E 601
+ D L YLH IVH+DI NLLL ++ G+A+ L P +++ T
Sbjct: 114 YFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 602 FAGTYGYVAPELAYTMKITE--KCDVYSFGVLVLEAIKGKHP 641
G+ + PE+A + K D++S GV + G +P
Sbjct: 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 23/162 (14%)
Query: 482 EFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQR 541
+F E++ +T+I++ + G ++ +++YE +E S IL D L +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS---ILKFDEYFFVLDKNYT 145
Query: 542 --------MNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593
+IK V ++ SY+H++ I H+D+ N+L+D ++DFG ++++
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 594 PESSNWTEFAGTYGYVAPEL-----AYTMKITEKCDVYSFGV 630
+ + GTY ++ PE +Y K D++S G+
Sbjct: 204 DKKIKGSR--GTYEFMPPEFFSNESSYN---GAKVDIWSLGI 240
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 486 EVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVI 545
EV L EI+H N++ + + L+ EL+ G L L+ + E + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 546 KGVADALSYLHHDCFPPIVHQDISSKN-LLLDLEY---EAHVADFGIAKFLKPESSNWTE 601
K + + + YLH I H D+ +N +LLD + DFG+A K + N E
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN--E 173
Query: 602 FAGTYG---YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
F +G +VAPE+ + + D++S GV+ + G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 551 ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610
YLH ++++D+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641
P + + + D ++ GVL+ E G P
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 13/146 (8%)
Query: 564 VHQDISSKNLLLDLEYEAHVADFGIAK--FLKPESSNWTEFAGTYGYVAPELAYTMKITE 621
+H+D++++N+LL + DFG+A+ + P+ + ++APE + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 622 KCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS 680
K DV+S+GVL+ E G P ++ D R+ P S E
Sbjct: 281 KSDVWSYGVLLWEIFSLGGSP------YPGVQMDEDFCSRLREGMRMRAPEYSTPE---- 330
Query: 681 IMEVAFSCLNESPESRPTMKVVTQQV 706
I ++ C + P+ RP + +++
Sbjct: 331 IYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 22/172 (12%)
Query: 486 EVKALTEIR-HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNV 544
EV+ L + + HRN+++ F +LV+E + GS+ + + EL S V
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---V 116
Query: 545 IKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGIAKFLK------PE 595
++ VA AL +LH+ I H+D+ +N+L + + + DFG+ +K P
Sbjct: 117 VQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPI 173
Query: 596 SS-NWTEFAGTYGYVAPEL--AYTMKIT---EKCDVYSFGVLVLEAIKGKHP 641
S+ G+ Y+APE+ A++ + + ++CD++S GV++ + G P
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,096,328
Number of Sequences: 62578
Number of extensions: 828236
Number of successful extensions: 4898
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 447
Number of HSP's that attempted gapping in prelim test: 2431
Number of HSP's gapped (non-prelim): 1472
length of query: 708
length of database: 14,973,337
effective HSP length: 106
effective length of query: 602
effective length of database: 8,340,069
effective search space: 5020721538
effective search space used: 5020721538
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)