Query 039322
Match_columns 708
No_of_seqs 549 out of 5473
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 08:33:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039322.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039322hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.9E-83 6.2E-88 763.5 51.1 679 1-707 235-949 (968)
2 KOG1187 Serine/threonine prote 100.0 9.6E-50 2.1E-54 412.3 24.2 280 423-707 62-350 (361)
3 KOG0581 Mitogen-activated prot 100.0 1.1E-47 2.3E-52 372.3 18.2 258 436-708 79-338 (364)
4 KOG0575 Polo-like serine/threo 100.0 4.6E-47 9.9E-52 389.1 20.5 251 436-705 18-269 (592)
5 KOG0615 Serine/threonine prote 100.0 1E-47 2.2E-52 374.3 14.3 261 434-708 170-440 (475)
6 KOG0192 Tyrosine kinase specif 100.0 1.2E-46 2.6E-51 385.7 22.9 255 436-707 41-301 (362)
7 KOG0197 Tyrosine kinases [Sign 100.0 1.3E-46 2.9E-51 382.2 17.1 251 436-706 206-458 (468)
8 KOG0591 NIMA (never in mitosis 100.0 4.4E-47 9.5E-52 351.5 9.2 259 436-706 19-282 (375)
9 KOG0595 Serine/threonine-prote 100.0 2.8E-45 6.1E-50 358.1 19.3 201 435-644 9-216 (429)
10 KOG0593 Predicted protein kina 100.0 2.4E-45 5.3E-50 343.4 14.5 262 436-705 2-284 (396)
11 KOG0598 Ribosomal protein S6 k 100.0 4.9E-45 1.1E-49 353.7 17.0 253 435-705 24-281 (357)
12 KOG1026 Nerve growth factor re 100.0 1.6E-44 3.5E-49 384.8 19.6 255 436-707 486-760 (774)
13 KOG0196 Tyrosine kinase, EPH ( 100.0 2.3E-44 5.1E-49 375.2 11.1 265 422-706 606-888 (996)
14 KOG0592 3-phosphoinositide-dep 100.0 2.1E-43 4.5E-48 355.8 17.2 255 433-706 70-339 (604)
15 KOG0193 Serine/threonine prote 100.0 1.4E-42 3.1E-47 353.9 17.4 262 429-707 385-651 (678)
16 KOG0659 Cdk activating kinase 100.0 2.7E-42 5.8E-47 317.8 17.5 262 436-705 2-281 (318)
17 KOG0578 p21-activated serine/t 100.0 6.2E-43 1.3E-47 355.8 14.6 250 436-705 273-523 (550)
18 KOG0661 MAPK related serine/th 100.0 5.8E-43 1.3E-47 347.0 13.3 262 434-705 8-291 (538)
19 KOG0600 Cdc2-related protein k 100.0 2.3E-42 5E-47 345.4 16.4 263 435-705 116-400 (560)
20 KOG0582 Ste20-like serine/thre 100.0 8.1E-42 1.7E-46 336.3 19.7 256 435-705 25-293 (516)
21 KOG4721 Serine/threonine prote 100.0 1.4E-42 3E-47 349.3 13.2 241 439-708 127-367 (904)
22 KOG0583 Serine/threonine prote 100.0 2.5E-41 5.5E-46 350.3 22.2 257 434-707 15-277 (370)
23 KOG0198 MEKK and related serin 100.0 6.8E-42 1.5E-46 339.3 15.9 253 436-707 17-278 (313)
24 KOG0611 Predicted serine/threo 100.0 1E-41 2.2E-46 330.2 14.9 252 436-708 53-306 (668)
25 KOG0580 Serine/threonine prote 100.0 6.3E-42 1.4E-46 310.8 11.3 255 435-708 21-276 (281)
26 KOG0597 Serine-threonine prote 100.0 5.8E-42 1.3E-46 345.1 12.2 249 436-705 2-251 (808)
27 KOG0616 cAMP-dependent protein 100.0 4.9E-41 1.1E-45 314.1 17.2 239 436-696 44-283 (355)
28 KOG4194 Membrane glycoprotein 100.0 1.4E-42 3E-47 350.8 5.8 348 5-353 81-456 (873)
29 KOG1095 Protein tyrosine kinas 100.0 1.3E-40 2.8E-45 368.2 21.6 253 436-706 692-958 (1025)
30 KOG0201 Serine/threonine prote 100.0 9.8E-42 2.1E-46 335.8 10.5 250 436-705 13-263 (467)
31 KOG0194 Protein tyrosine kinas 100.0 5.8E-41 1.3E-45 347.3 16.5 255 436-707 157-418 (474)
32 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.9E-40 8.5E-45 346.0 22.4 257 435-707 6-332 (338)
33 KOG0585 Ca2+/calmodulin-depend 100.0 1.2E-40 2.6E-45 330.0 16.2 260 433-708 94-375 (576)
34 PLN00113 leucine-rich repeat r 100.0 7E-40 1.5E-44 390.9 25.1 353 1-353 211-588 (968)
35 KOG0605 NDR and related serine 100.0 2.1E-40 4.5E-45 334.6 16.4 255 434-706 139-446 (550)
36 KOG0588 Serine/threonine prote 100.0 1.1E-40 2.5E-45 342.8 14.5 253 436-708 12-266 (786)
37 KOG1094 Discoidin domain recep 100.0 3.1E-40 6.8E-45 333.8 17.3 260 436-707 538-802 (807)
38 KOG3653 Transforming growth fa 100.0 5.9E-40 1.3E-44 325.5 17.9 258 436-706 210-500 (534)
39 KOG0589 Serine/threonine prote 100.0 1.8E-40 3.9E-45 336.8 14.5 254 435-705 3-258 (426)
40 cd05631 STKc_GRK4 Catalytic do 100.0 8.1E-40 1.8E-44 334.7 19.4 256 438-707 2-263 (285)
41 cd05571 STKc_PKB Catalytic dom 100.0 7.3E-40 1.6E-44 341.0 18.5 246 442-706 1-252 (323)
42 KOG0694 Serine/threonine prote 100.0 8.7E-40 1.9E-44 339.3 18.7 246 434-699 366-613 (694)
43 PHA02988 hypothetical protein; 100.0 2.9E-39 6.2E-44 329.7 22.2 246 442-707 26-277 (283)
44 cd05612 STKc_PRKX_like Catalyt 100.0 6.7E-40 1.5E-44 336.3 17.6 250 436-707 1-256 (291)
45 KOG0663 Protein kinase PITSLRE 100.0 1E-39 2.2E-44 309.8 17.0 262 436-705 76-361 (419)
46 cd05096 PTKc_DDR1 Catalytic do 100.0 5.1E-39 1.1E-43 332.3 22.7 262 436-707 5-303 (304)
47 cd06649 PKc_MEK2 Catalytic dom 100.0 6.9E-39 1.5E-43 334.9 23.2 261 436-708 5-304 (331)
48 PTZ00263 protein kinase A cata 100.0 1.7E-39 3.6E-44 339.1 18.0 250 436-707 18-273 (329)
49 KOG2345 Serine/threonine prote 100.0 8.4E-40 1.8E-44 298.3 13.5 259 435-706 20-297 (302)
50 KOG4194 Membrane glycoprotein 100.0 3.2E-41 7E-46 340.9 4.5 344 5-349 55-405 (873)
51 cd05595 STKc_PKB_beta Catalyti 100.0 3.6E-39 7.9E-44 335.6 19.7 246 442-706 1-252 (323)
52 KOG0033 Ca2+/calmodulin-depend 100.0 5.7E-41 1.2E-45 304.7 5.2 257 435-708 10-270 (355)
53 cd05593 STKc_PKB_gamma Catalyt 100.0 4.3E-39 9.4E-44 335.6 20.0 247 442-707 1-253 (328)
54 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.4E-38 3.1E-43 322.2 22.9 254 435-707 4-263 (266)
55 cd05584 STKc_p70S6K Catalytic 100.0 3.7E-39 8E-44 335.7 18.9 247 442-706 2-257 (323)
56 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2E-39 4.4E-44 339.6 16.7 257 436-707 1-259 (333)
57 cd05106 PTKc_CSF-1R Catalytic 100.0 7.9E-39 1.7E-43 339.1 21.4 259 433-707 35-370 (374)
58 cd05585 STKc_YPK1_like Catalyt 100.0 4.5E-39 9.9E-44 333.5 19.1 244 444-706 1-248 (312)
59 PTZ00426 cAMP-dependent protei 100.0 3.4E-39 7.4E-44 337.2 18.1 250 436-707 30-286 (340)
60 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.1E-39 1.5E-43 328.3 19.9 263 436-707 5-287 (288)
61 KOG0032 Ca2+/calmodulin-depend 100.0 1E-38 2.2E-43 330.2 21.2 257 435-708 34-296 (382)
62 cd05104 PTKc_Kit Catalytic dom 100.0 1.2E-38 2.6E-43 338.0 21.9 257 435-707 34-372 (375)
63 PLN00034 mitogen-activated pro 100.0 7.5E-39 1.6E-43 337.8 19.3 251 436-707 74-330 (353)
64 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.7E-38 5.9E-43 318.5 22.4 250 436-706 4-255 (256)
65 cd05608 STKc_GRK1 Catalytic do 100.0 1.1E-38 2.4E-43 325.5 19.7 252 444-707 1-259 (280)
66 cd05048 PTKc_Ror Catalytic Dom 100.0 3.3E-38 7.1E-43 323.0 23.2 255 436-707 5-281 (283)
67 KOG0599 Phosphorylase kinase g 100.0 1.8E-39 4E-44 299.3 12.3 259 433-706 14-284 (411)
68 PF07714 Pkinase_Tyr: Protein 100.0 4.7E-39 1E-43 324.1 16.4 249 440-706 3-259 (259)
69 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.7E-38 3.8E-43 320.9 20.5 256 433-707 3-259 (261)
70 KOG0610 Putative serine/threon 100.0 1.5E-38 3.2E-43 311.0 18.8 255 436-705 77-392 (459)
71 cd05589 STKc_PKN Catalytic dom 100.0 1.3E-38 2.8E-43 332.0 19.7 249 438-706 1-258 (324)
72 KOG0594 Protein kinase PCTAIRE 100.0 2.4E-38 5.1E-43 307.6 19.9 265 435-705 10-302 (323)
73 cd05588 STKc_aPKC Catalytic do 100.0 1.4E-38 2.9E-43 332.2 19.5 255 442-707 1-264 (329)
74 cd05594 STKc_PKB_alpha Catalyt 100.0 6.3E-39 1.4E-43 334.5 16.7 247 442-707 1-254 (325)
75 cd05590 STKc_nPKC_eta Catalyti 100.0 1.2E-38 2.6E-43 331.2 18.7 247 442-707 1-255 (320)
76 cd08228 STKc_Nek6 Catalytic do 100.0 4.9E-38 1.1E-42 318.8 22.4 260 436-707 2-263 (267)
77 cd05618 STKc_aPKC_iota Catalyt 100.0 1.7E-38 3.7E-43 331.3 19.4 254 442-706 1-263 (329)
78 cd06650 PKc_MEK1 Catalytic dom 100.0 5.4E-38 1.2E-42 328.1 23.2 263 435-707 4-301 (333)
79 KOG1989 ARK protein kinase fam 100.0 2E-38 4.4E-43 340.2 20.3 252 435-706 36-308 (738)
80 cd05062 PTKc_IGF-1R Catalytic 100.0 4E-38 8.8E-43 321.1 21.7 257 434-707 4-276 (277)
81 KOG0574 STE20-like serine/thre 100.0 3.4E-40 7.3E-45 307.9 5.7 251 436-706 33-284 (502)
82 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.7E-38 3.8E-43 328.1 19.1 264 435-707 4-290 (303)
83 cd05614 STKc_MSK2_N N-terminal 100.0 5.8E-39 1.3E-43 336.1 15.8 257 437-707 1-269 (332)
84 cd05596 STKc_ROCK Catalytic do 100.0 6.9E-39 1.5E-43 339.3 16.1 258 434-707 41-306 (370)
85 cd05591 STKc_nPKC_epsilon Cata 100.0 1.7E-38 3.8E-43 330.5 18.6 247 442-707 1-256 (321)
86 cd07848 STKc_CDKL5 Catalytic d 100.0 2.3E-38 5.1E-43 324.7 19.3 264 436-707 1-286 (287)
87 KOG4257 Focal adhesion tyrosin 100.0 2.1E-38 4.6E-43 322.4 18.5 250 437-706 390-646 (974)
88 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.4E-38 1.4E-42 315.6 22.1 251 436-707 4-256 (256)
89 cd05049 PTKc_Trk Catalytic dom 100.0 6.1E-38 1.3E-42 320.5 22.1 256 435-707 4-279 (280)
90 cd05587 STKc_cPKC Catalytic do 100.0 3.2E-38 7E-43 329.0 20.3 250 437-705 1-257 (324)
91 cd05072 PTKc_Lyn Catalytic dom 100.0 7.7E-38 1.7E-42 316.2 22.3 253 435-707 5-259 (261)
92 PTZ00267 NIMA-related protein 100.0 6.1E-38 1.3E-42 342.6 23.2 252 436-705 67-323 (478)
93 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.6E-39 1E-43 339.8 13.6 254 436-707 1-287 (350)
94 cd05033 PTKc_EphR Catalytic do 100.0 1.3E-37 2.9E-42 315.3 23.6 253 436-707 4-263 (266)
95 cd05605 STKc_GRK4_like Catalyt 100.0 2.9E-38 6.2E-43 323.3 18.7 257 437-707 1-263 (285)
96 cd05628 STKc_NDR1 Catalytic do 100.0 2.8E-38 6.1E-43 334.6 19.2 253 436-707 1-295 (363)
97 KOG0660 Mitogen-activated prot 100.0 8.4E-39 1.8E-43 309.0 13.6 263 434-705 20-310 (359)
98 cd08529 STKc_FA2-like Catalyti 100.0 9.6E-38 2.1E-42 314.6 22.0 254 437-707 1-255 (256)
99 cd06646 STKc_MAP4K5 Catalytic 100.0 8.6E-38 1.9E-42 317.0 21.8 253 436-706 9-266 (267)
100 cd05575 STKc_SGK Catalytic dom 100.0 2.3E-38 5E-43 329.9 17.9 246 442-706 1-252 (323)
101 cd05592 STKc_nPKC_theta_delta 100.0 4.1E-38 8.9E-43 326.6 19.6 245 442-705 1-248 (316)
102 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.9E-38 6.3E-43 332.2 18.6 262 437-707 1-292 (338)
103 cd05626 STKc_LATS2 Catalytic d 100.0 3.1E-38 6.7E-43 336.4 19.0 252 437-707 2-307 (381)
104 KOG4278 Protein tyrosine kinas 100.0 8.7E-39 1.9E-43 324.6 13.8 259 428-707 259-521 (1157)
105 cd05616 STKc_cPKC_beta Catalyt 100.0 4.7E-38 1E-42 327.6 19.8 250 437-705 1-257 (323)
106 cd05621 STKc_ROCK2 Catalytic d 100.0 1.9E-38 4E-43 335.4 16.9 258 434-707 41-306 (370)
107 KOG2052 Activin A type IB rece 100.0 6.9E-38 1.5E-42 308.5 19.4 258 433-706 208-500 (513)
108 cd05090 PTKc_Ror1 Catalytic do 100.0 1.8E-37 3.9E-42 317.4 23.3 255 436-707 5-281 (283)
109 cd05599 STKc_NDR_like Catalyti 100.0 1.6E-38 3.5E-43 337.2 16.1 254 436-707 1-298 (364)
110 PHA03212 serine/threonine kina 100.0 7.1E-38 1.5E-42 332.7 20.9 255 436-707 92-378 (391)
111 cd05105 PTKc_PDGFR_alpha Catal 100.0 1E-37 2.2E-42 331.6 22.1 257 435-707 36-395 (400)
112 cd05570 STKc_PKC Catalytic dom 100.0 5E-38 1.1E-42 326.5 19.3 246 442-706 1-253 (318)
113 cd07862 STKc_CDK6 Catalytic do 100.0 6.1E-38 1.3E-42 322.2 19.6 264 436-707 1-289 (290)
114 cd08229 STKc_Nek7 Catalytic do 100.0 1.3E-37 2.9E-42 315.6 21.5 260 436-707 2-263 (267)
115 cd05068 PTKc_Frk_like Catalyti 100.0 2.4E-37 5.1E-42 312.6 23.1 252 435-707 5-259 (261)
116 KOG0658 Glycogen synthase kina 100.0 9.3E-39 2E-43 309.3 12.2 257 436-705 24-306 (364)
117 cd05052 PTKc_Abl Catalytic dom 100.0 2.1E-37 4.5E-42 313.3 22.7 252 436-707 6-260 (263)
118 cd05582 STKc_RSK_N N-terminal 100.0 1.7E-38 3.8E-43 330.2 15.2 244 442-705 2-254 (318)
119 cd05629 STKc_NDR_like_fungal C 100.0 2.7E-38 5.8E-43 336.8 16.3 254 436-707 1-307 (377)
120 PTZ00283 serine/threonine prot 100.0 9.8E-38 2.1E-42 340.8 20.9 256 434-705 30-297 (496)
121 cd05093 PTKc_TrkB Catalytic do 100.0 2.8E-37 6E-42 316.7 23.0 254 436-707 5-277 (288)
122 cd05619 STKc_nPKC_theta Cataly 100.0 9.2E-38 2E-42 323.8 19.6 245 442-705 1-248 (316)
123 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.7E-37 1E-41 311.6 24.3 260 436-707 2-263 (267)
124 cd05622 STKc_ROCK1 Catalytic d 100.0 5.1E-38 1.1E-42 332.5 17.6 263 430-708 37-307 (371)
125 cd05601 STKc_CRIK Catalytic do 100.0 1.7E-38 3.7E-43 332.2 13.8 254 436-706 1-264 (330)
126 cd05603 STKc_SGK2 Catalytic do 100.0 5.7E-38 1.2E-42 326.8 17.6 246 442-706 1-252 (321)
127 cd05602 STKc_SGK1 Catalytic do 100.0 5.4E-38 1.2E-42 327.5 17.3 240 442-700 1-242 (325)
128 cd05598 STKc_LATS Catalytic do 100.0 2.4E-38 5.2E-43 337.2 15.0 254 436-707 1-303 (376)
129 cd05059 PTKc_Tec_like Catalyti 100.0 2.5E-37 5.3E-42 311.4 21.4 249 436-706 4-255 (256)
130 cd05091 PTKc_Ror2 Catalytic do 100.0 2.2E-37 4.7E-42 316.9 21.3 255 436-707 5-281 (283)
131 cd05108 PTKc_EGFR Catalytic do 100.0 2.6E-37 5.7E-42 321.2 22.2 250 436-707 7-266 (316)
132 cd05054 PTKc_VEGFR Catalytic d 100.0 1.9E-37 4E-42 324.2 21.2 256 435-707 6-331 (337)
133 cd06654 STKc_PAK1 Catalytic do 100.0 2.5E-37 5.4E-42 318.1 21.7 251 436-706 20-271 (296)
134 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-37 2.4E-42 323.4 19.2 246 442-706 1-249 (316)
135 cd05094 PTKc_TrkC Catalytic do 100.0 4.1E-37 8.9E-42 316.0 23.1 254 436-707 5-280 (291)
136 cd06625 STKc_MEKK3_like Cataly 100.0 3.2E-37 6.9E-42 312.1 21.8 257 436-708 2-263 (263)
137 cd05607 STKc_GRK7 Catalytic do 100.0 2.9E-37 6.4E-42 314.4 20.9 248 444-704 1-249 (277)
138 cd08221 STKc_Nek9 Catalytic do 100.0 5.8E-37 1.3E-41 308.9 22.8 255 437-708 1-256 (256)
139 cd05604 STKc_SGK3 Catalytic do 100.0 7.1E-38 1.5E-42 326.5 16.7 245 442-705 1-251 (325)
140 cd05625 STKc_LATS1 Catalytic d 100.0 7.2E-38 1.6E-42 334.1 17.1 252 437-706 2-306 (382)
141 cd05615 STKc_cPKC_alpha Cataly 100.0 1.6E-37 3.5E-42 323.3 19.3 250 437-705 1-257 (323)
142 cd08219 STKc_Nek3 Catalytic do 100.0 3.6E-37 7.7E-42 310.2 21.2 251 437-705 1-252 (255)
143 cd05061 PTKc_InsR Catalytic do 100.0 4.3E-37 9.4E-42 315.3 21.9 257 434-707 4-276 (288)
144 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.6E-37 5.5E-42 322.3 20.3 253 442-706 1-261 (327)
145 PRK13184 pknD serine/threonine 100.0 3.8E-37 8.2E-42 343.7 22.7 258 436-706 2-287 (932)
146 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.8E-37 1.3E-41 309.5 22.1 252 435-707 5-258 (260)
147 cd05084 PTKc_Fes Catalytic dom 100.0 8.4E-37 1.8E-41 306.9 23.1 246 443-707 2-251 (252)
148 PF00069 Pkinase: Protein kina 100.0 6E-38 1.3E-42 316.8 14.6 258 438-708 1-260 (260)
149 cd05036 PTKc_ALK_LTK Catalytic 100.0 8.2E-37 1.8E-41 311.4 23.0 256 434-707 4-276 (277)
150 cd05116 PTKc_Syk Catalytic dom 100.0 9.7E-37 2.1E-41 307.3 23.3 245 443-707 2-253 (257)
151 cd06645 STKc_MAP4K3 Catalytic 100.0 3.5E-37 7.5E-42 312.5 20.1 252 436-705 9-265 (267)
152 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-36 2.7E-41 306.3 23.8 245 443-707 2-253 (257)
153 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.3E-37 7.2E-42 319.5 20.1 263 436-707 6-288 (309)
154 cd06612 STKc_MST1_2 Catalytic 100.0 6.1E-37 1.3E-41 308.7 21.5 252 436-707 3-255 (256)
155 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.5E-37 1.8E-41 308.3 22.6 252 435-707 5-258 (260)
156 cd05032 PTKc_InsR_like Catalyt 100.0 7.5E-37 1.6E-41 311.9 22.2 256 435-707 5-276 (277)
157 cd06638 STKc_myosinIIIA Cataly 100.0 4.9E-37 1.1E-41 314.8 20.9 266 426-708 8-286 (286)
158 cd06624 STKc_ASK Catalytic dom 100.0 7.4E-37 1.6E-41 310.3 21.9 260 433-708 5-268 (268)
159 cd05071 PTKc_Src Catalytic dom 100.0 9.7E-37 2.1E-41 308.1 22.7 252 435-707 5-258 (262)
160 cd06637 STKc_TNIK Catalytic do 100.0 2.8E-37 6E-42 314.2 18.6 257 433-708 3-272 (272)
161 cd05092 PTKc_TrkA Catalytic do 100.0 8.9E-37 1.9E-41 311.6 22.2 254 436-707 5-279 (280)
162 cd05053 PTKc_FGFR Catalytic do 100.0 6.5E-37 1.4E-41 315.1 21.3 257 434-707 10-289 (293)
163 cd05066 PTKc_EphR_A Catalytic 100.0 1.4E-36 3E-41 308.0 23.4 253 436-707 4-264 (267)
164 cd06655 STKc_PAK2 Catalytic do 100.0 4.9E-37 1.1E-41 315.8 20.2 252 436-707 19-271 (296)
165 cd05630 STKc_GRK6 Catalytic do 100.0 4E-37 8.7E-42 314.7 19.3 257 437-707 1-263 (285)
166 cd06619 PKc_MKK5 Catalytic dom 100.0 1.3E-36 2.9E-41 310.1 23.1 254 436-707 1-255 (279)
167 cd06656 STKc_PAK3 Catalytic do 100.0 9.2E-37 2E-41 314.0 21.9 251 436-706 19-270 (297)
168 KOG0667 Dual-specificity tyros 100.0 3.7E-37 8.1E-42 320.1 18.8 196 436-644 186-390 (586)
169 cd05069 PTKc_Yes Catalytic dom 100.0 1.8E-36 4E-41 305.8 23.5 251 436-707 6-258 (260)
170 cd05051 PTKc_DDR Catalytic dom 100.0 9.1E-37 2E-41 314.5 21.7 262 435-707 4-295 (296)
171 KOG4717 Serine/threonine prote 100.0 2.8E-37 6E-42 307.7 17.0 252 436-707 18-272 (864)
172 cd07876 STKc_JNK2 Catalytic do 100.0 1E-36 2.2E-41 322.6 22.3 262 434-707 19-317 (359)
173 cd05075 PTKc_Axl Catalytic dom 100.0 2E-36 4.3E-41 307.9 23.7 254 438-707 1-269 (272)
174 cd05095 PTKc_DDR2 Catalytic do 100.0 1.5E-36 3.2E-41 312.6 23.0 262 436-707 5-295 (296)
175 cd06613 STKc_MAP4K3_like Catal 100.0 1.5E-36 3.2E-41 307.0 22.5 253 436-705 3-260 (262)
176 cd05050 PTKc_Musk Catalytic do 100.0 1.3E-36 2.9E-41 311.8 22.4 256 435-707 4-287 (288)
177 cd05089 PTKc_Tie1 Catalytic do 100.0 1.4E-36 3E-41 312.9 22.7 254 436-707 2-273 (297)
178 cd07861 STKc_CDK1_euk Catalyti 100.0 7E-37 1.5E-41 313.5 20.3 262 437-707 1-284 (285)
179 cd05045 PTKc_RET Catalytic dom 100.0 1.9E-36 4.2E-41 310.9 23.6 254 437-707 1-284 (290)
180 KOG1025 Epidermal growth facto 100.0 1.6E-38 3.4E-43 332.8 8.1 249 437-706 697-954 (1177)
181 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-36 2.3E-41 323.5 22.2 259 433-707 34-397 (401)
182 cd05111 PTK_HER3 Pseudokinase 100.0 2.1E-36 4.5E-41 308.6 23.5 251 436-707 7-266 (279)
183 cd05035 PTKc_Axl_like Catalyti 100.0 2.1E-36 4.6E-41 307.9 23.5 254 438-707 1-270 (273)
184 cd06640 STKc_MST4 Catalytic do 100.0 2.1E-36 4.5E-41 308.4 23.4 251 436-707 4-255 (277)
185 cd06644 STKc_STK10_LOK Catalyt 100.0 1.7E-36 3.7E-41 311.6 22.8 253 436-706 12-270 (292)
186 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-36 3E-41 312.7 22.1 262 436-707 5-294 (295)
187 cd06615 PKc_MEK Catalytic doma 100.0 1.8E-36 3.8E-41 313.7 22.9 260 436-707 1-289 (308)
188 cd05034 PTKc_Src_like Catalyti 100.0 1.6E-36 3.4E-41 306.6 22.1 252 435-707 5-259 (261)
189 cd05085 PTKc_Fer Catalytic dom 100.0 3.1E-36 6.6E-41 302.4 23.9 245 443-707 2-249 (250)
190 cd05632 STKc_GRK5 Catalytic do 100.0 7.6E-37 1.6E-41 312.8 19.9 254 438-705 2-261 (285)
191 cd06609 STKc_MST3_like Catalyt 100.0 1.4E-36 2.9E-41 309.4 21.6 252 436-707 1-253 (274)
192 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.7E-36 3.6E-41 313.9 22.5 256 435-707 17-297 (307)
193 cd05043 PTK_Ryk Pseudokinase d 100.0 1.9E-36 4.2E-41 309.3 22.6 256 435-707 5-274 (280)
194 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.9E-36 6.4E-41 308.4 24.0 258 438-707 6-279 (283)
195 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.1E-36 4.5E-41 312.8 23.0 256 435-707 14-294 (304)
196 cd05063 PTKc_EphR_A2 Catalytic 100.0 3E-36 6.5E-41 305.8 23.7 254 435-707 4-265 (268)
197 cd05627 STKc_NDR2 Catalytic do 100.0 1.7E-37 3.6E-42 328.5 15.0 253 436-706 1-294 (360)
198 cd06643 STKc_SLK Catalytic dom 100.0 1.5E-36 3.3E-41 310.4 21.5 252 438-707 7-264 (282)
199 cd05055 PTKc_PDGFR Catalytic d 100.0 1.9E-36 4.2E-41 312.3 22.4 256 435-707 34-299 (302)
200 KOG0607 MAP kinase-interacting 100.0 1.8E-37 3.8E-42 292.4 13.1 266 428-708 75-364 (463)
201 KOG0199 ACK and related non-re 100.0 1.8E-37 4E-42 319.5 14.5 251 436-705 110-368 (1039)
202 cd06611 STKc_SLK_like Catalyti 100.0 1.1E-36 2.4E-41 311.2 20.0 255 435-707 4-264 (280)
203 cd00192 PTKc Catalytic domain 100.0 2.6E-36 5.7E-41 305.1 22.5 249 442-707 1-262 (262)
204 cd08218 STKc_Nek1 Catalytic do 100.0 1.8E-36 3.8E-41 305.3 21.0 255 437-708 1-256 (256)
205 cd08223 STKc_Nek4 Catalytic do 100.0 2.8E-36 6E-41 304.1 22.4 254 437-707 1-256 (257)
206 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.9E-36 6.3E-41 305.8 22.5 258 436-707 1-266 (267)
207 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.6E-36 7.8E-41 312.4 23.7 256 435-707 11-291 (314)
208 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.1E-36 2.3E-41 312.2 19.6 257 436-707 1-264 (286)
209 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.9E-37 1.9E-41 311.2 18.8 251 436-707 4-255 (277)
210 cd07874 STKc_JNK3 Catalytic do 100.0 1.3E-36 2.8E-41 321.4 20.6 262 434-707 15-313 (355)
211 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.4E-36 9.6E-41 307.4 23.9 260 436-707 4-281 (284)
212 cd07853 STKc_NLK Catalytic dom 100.0 1.1E-36 2.4E-41 323.6 20.1 262 437-707 1-290 (372)
213 cd05112 PTKc_Itk Catalytic dom 100.0 3E-36 6.6E-41 303.6 22.2 251 436-707 4-256 (256)
214 cd05109 PTKc_HER2 Catalytic do 100.0 3.9E-36 8.5E-41 306.8 23.3 253 435-707 6-266 (279)
215 cd05039 PTKc_Csk_like Catalyti 100.0 4.2E-36 9.2E-41 302.5 23.2 249 435-707 5-254 (256)
216 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.1E-36 4.7E-41 306.8 21.2 254 437-707 1-266 (267)
217 cd06631 STKc_YSK4 Catalytic do 100.0 2.1E-36 4.6E-41 306.4 21.1 256 437-707 1-264 (265)
218 cd05040 PTKc_Ack_like Catalyti 100.0 2.2E-36 4.9E-41 304.8 21.1 246 442-707 1-256 (257)
219 cd05088 PTKc_Tie2 Catalytic do 100.0 2.3E-36 5E-41 312.0 21.5 255 435-707 6-278 (303)
220 cd05065 PTKc_EphR_B Catalytic 100.0 3.7E-36 7.9E-41 305.4 22.4 252 436-707 4-266 (269)
221 KOG0577 Serine/threonine prote 100.0 6.4E-38 1.4E-42 317.0 9.3 249 437-706 27-279 (948)
222 PTZ00036 glycogen synthase kin 100.0 9.9E-37 2.1E-41 329.2 19.1 260 435-707 65-353 (440)
223 PTZ00266 NIMA-related protein 100.0 6E-37 1.3E-41 343.3 17.8 260 433-707 10-297 (1021)
224 cd05586 STKc_Sck1_like Catalyt 100.0 3.2E-37 6.9E-42 322.5 14.7 245 444-706 1-254 (330)
225 cd05060 PTKc_Syk_like Catalyti 100.0 5.4E-36 1.2E-40 301.9 23.1 245 442-707 1-253 (257)
226 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-36 2.4E-41 318.1 18.4 255 436-707 1-268 (331)
227 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.1E-36 1.3E-40 302.1 23.2 239 443-707 2-262 (262)
228 cd05103 PTKc_VEGFR2 Catalytic 100.0 3E-36 6.6E-41 316.4 21.7 256 436-707 7-337 (343)
229 cd05082 PTKc_Csk Catalytic dom 100.0 5.3E-36 1.1E-40 301.8 22.6 247 436-707 6-254 (256)
230 cd08227 PK_STRAD_alpha Pseudok 100.0 2.6E-36 5.6E-41 315.2 21.0 262 440-707 2-309 (327)
231 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.9E-36 1.3E-40 303.7 22.5 253 442-707 1-268 (269)
232 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.3E-36 5.1E-41 312.0 19.8 263 436-707 6-288 (301)
233 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.2E-36 6.9E-41 308.1 20.4 262 427-707 7-281 (282)
234 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.8E-36 4E-41 310.1 18.6 259 436-706 5-267 (284)
235 cd07863 STKc_CDK4 Catalytic do 100.0 3.6E-36 7.8E-41 308.7 20.6 263 437-707 1-287 (288)
236 cd06639 STKc_myosinIIIB Cataly 100.0 3.5E-36 7.5E-41 309.2 20.5 263 428-707 14-289 (291)
237 cd07875 STKc_JNK1 Catalytic do 100.0 3.1E-36 6.8E-41 319.4 20.7 262 434-707 22-320 (364)
238 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.5E-36 1.2E-40 304.4 21.7 239 443-707 2-274 (274)
239 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.8E-36 1.7E-40 305.4 22.8 261 436-707 4-281 (284)
240 PHA03211 serine/threonine kina 100.0 3.1E-36 6.7E-41 323.5 20.3 256 436-707 169-457 (461)
241 cd05100 PTKc_FGFR3 Catalytic d 100.0 9.2E-36 2E-40 312.0 23.4 255 436-707 12-291 (334)
242 cd05073 PTKc_Hck Catalytic dom 100.0 8.1E-36 1.8E-40 301.1 22.1 252 435-707 5-258 (260)
243 cd06658 STKc_PAK5 Catalytic do 100.0 1.7E-36 3.6E-41 311.1 17.3 249 438-706 24-273 (292)
244 KOG0983 Mitogen-activated prot 100.0 5E-37 1.1E-41 283.5 11.8 253 436-705 92-349 (391)
245 cd06647 STKc_PAK_I Catalytic d 100.0 6.8E-36 1.5E-40 306.9 21.6 251 436-706 19-270 (293)
246 cd07868 STKc_CDK8 Catalytic do 100.0 6E-36 1.3E-40 311.5 21.4 194 441-644 6-218 (317)
247 cd07847 STKc_CDKL1_4 Catalytic 100.0 4E-36 8.6E-41 308.1 19.8 264 436-707 1-285 (286)
248 cd06608 STKc_myosinIII_like Ca 100.0 3.8E-36 8.1E-41 306.4 19.3 258 434-708 4-275 (275)
249 KOG4279 Serine/threonine prote 100.0 5.3E-37 1.1E-41 315.4 12.8 246 443-704 582-831 (1226)
250 cd06659 STKc_PAK6 Catalytic do 100.0 2.3E-36 4.9E-41 311.0 17.7 249 438-706 23-272 (297)
251 cd05041 PTKc_Fes_like Catalyti 100.0 1.6E-35 3.6E-40 297.3 23.4 247 442-707 1-250 (251)
252 cd05042 PTKc_Aatyk Catalytic d 100.0 6.1E-36 1.3E-40 303.7 20.5 248 443-706 2-267 (269)
253 KOG0579 Ste20-like serine/thre 100.0 1.6E-37 3.5E-42 316.0 8.7 254 436-707 32-291 (1187)
254 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-35 3.2E-40 301.0 23.3 247 443-707 2-266 (270)
255 cd06651 STKc_MEKK3 Catalytic d 100.0 8.5E-36 1.8E-40 302.1 21.4 253 436-705 2-261 (266)
256 cd05624 STKc_MRCK_beta Catalyt 100.0 1.7E-36 3.8E-41 316.6 16.8 257 436-707 1-268 (331)
257 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1E-35 2.2E-40 304.9 22.2 261 436-707 1-268 (287)
258 cd08217 STKc_Nek2 Catalytic do 100.0 1E-35 2.2E-40 301.3 21.8 253 437-705 1-262 (265)
259 cd05058 PTKc_Met_Ron Catalytic 100.0 1.3E-35 2.8E-40 300.1 22.4 247 442-707 1-257 (262)
260 PTZ00284 protein kinase; Provi 100.0 3.4E-36 7.3E-41 329.0 19.5 265 430-708 123-441 (467)
261 cd05574 STKc_phototropin_like 100.0 1E-35 2.2E-40 309.5 22.1 255 436-705 1-289 (316)
262 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.2E-36 9.1E-41 316.0 19.3 262 432-707 11-300 (343)
263 cd06917 STKc_NAK1_like Catalyt 100.0 1.4E-35 3E-40 302.6 22.4 251 437-707 2-257 (277)
264 KOG0596 Dual specificity; seri 100.0 1.5E-36 3.3E-41 306.1 14.8 252 435-705 360-627 (677)
265 cd05623 STKc_MRCK_alpha Cataly 100.0 3.2E-36 7E-41 314.9 17.8 256 436-706 1-267 (332)
266 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-35 2.9E-40 300.4 21.8 254 437-706 1-262 (264)
267 cd06641 STKc_MST3 Catalytic do 100.0 2.2E-35 4.7E-40 300.9 23.4 249 436-705 4-253 (277)
268 cd05057 PTKc_EGFR_like Catalyt 100.0 2.3E-35 5E-40 301.2 23.6 252 436-707 7-266 (279)
269 cd06623 PKc_MAPKK_plant_like C 100.0 1.7E-35 3.7E-40 299.6 22.4 255 436-706 1-257 (264)
270 cd05086 PTKc_Aatyk2 Catalytic 100.0 9.9E-36 2.2E-40 301.8 20.5 251 443-706 2-266 (268)
271 cd06605 PKc_MAPKK Catalytic do 100.0 4.4E-36 9.6E-41 304.1 17.9 257 436-707 1-259 (265)
272 cd07839 STKc_CDK5 Catalytic do 100.0 2.9E-36 6.3E-41 308.7 16.7 264 437-708 1-284 (284)
273 cd05580 STKc_PKA Catalytic dom 100.0 1.1E-35 2.4E-40 305.2 20.9 249 436-706 1-255 (290)
274 cd06652 STKc_MEKK2 Catalytic d 100.0 1.8E-35 3.9E-40 299.6 22.1 255 436-708 2-264 (265)
275 cd05083 PTKc_Chk Catalytic dom 100.0 1.6E-35 3.5E-40 297.9 21.6 246 436-707 6-252 (254)
276 cd05046 PTK_CCK4 Pseudokinase 100.0 1.4E-35 3.1E-40 302.1 21.5 256 436-707 5-274 (275)
277 cd08528 STKc_Nek10 Catalytic d 100.0 1.5E-35 3.2E-40 301.0 21.5 258 437-707 1-268 (269)
278 smart00219 TyrKc Tyrosine kina 100.0 2.6E-35 5.6E-40 297.2 23.0 251 438-706 1-258 (258)
279 cd06630 STKc_MEKK1 Catalytic d 100.0 1.6E-35 3.5E-40 300.5 21.1 257 437-706 1-265 (268)
280 cd06648 STKc_PAK_II Catalytic 100.0 1.6E-35 3.5E-40 302.9 21.2 250 437-706 20-270 (285)
281 cd05056 PTKc_FAK Catalytic dom 100.0 2.7E-35 5.9E-40 299.1 22.6 251 436-707 6-263 (270)
282 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.3E-35 5E-40 297.7 21.8 238 442-707 1-259 (259)
283 cd06614 STKc_PAK Catalytic dom 100.0 1.9E-35 4.1E-40 303.0 21.4 255 434-707 17-272 (286)
284 KOG0584 Serine/threonine prote 100.0 7.2E-37 1.6E-41 314.6 10.6 250 439-705 43-296 (632)
285 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.1E-35 4.6E-40 302.4 21.5 262 436-707 4-281 (284)
286 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.7E-35 3.7E-40 304.1 20.8 265 434-707 3-290 (291)
287 cd07846 STKc_CDKL2_3 Catalytic 100.0 8.2E-36 1.8E-40 305.8 18.4 264 436-707 1-285 (286)
288 cd07841 STKc_CDK7 Catalytic do 100.0 1.2E-35 2.6E-40 306.4 19.8 264 437-706 1-283 (298)
289 cd07867 STKc_CDC2L6 Catalytic 100.0 2.6E-35 5.6E-40 306.8 22.2 193 442-644 7-218 (317)
290 cd08220 STKc_Nek8 Catalytic do 100.0 2.5E-35 5.4E-40 297.0 21.4 252 437-706 1-254 (256)
291 PHA03207 serine/threonine kina 100.0 1.1E-35 2.3E-40 317.7 19.8 257 435-707 91-377 (392)
292 cd07844 STKc_PCTAIRE_like Cata 100.0 3.2E-35 6.9E-40 302.1 22.6 263 436-707 5-290 (291)
293 cd06632 STKc_MEKK1_plant Catal 100.0 1.8E-35 4E-40 298.3 20.4 253 437-707 1-257 (258)
294 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1E-35 2.2E-40 300.0 18.4 239 443-707 2-258 (258)
295 PHA03209 serine/threonine kina 100.0 3.8E-36 8.2E-41 317.2 15.7 191 434-641 64-255 (357)
296 cd05609 STKc_MAST Catalytic do 100.0 2.1E-35 4.5E-40 305.4 20.6 254 436-705 1-273 (305)
297 cd05110 PTKc_HER4 Catalytic do 100.0 3.7E-35 8E-40 303.1 22.4 252 436-707 7-266 (303)
298 cd05044 PTKc_c-ros Catalytic d 100.0 2.4E-35 5.1E-40 299.5 20.5 249 442-707 1-268 (269)
299 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.7E-35 7.9E-40 298.6 21.5 259 437-707 2-271 (272)
300 cd06607 STKc_TAO Catalytic dom 100.0 4.9E-35 1.1E-39 302.9 22.7 251 436-707 15-269 (307)
301 cd05577 STKc_GRK Catalytic dom 100.0 2E-35 4.4E-40 301.1 19.5 249 444-706 1-255 (277)
302 cd08225 STKc_Nek5 Catalytic do 100.0 2.4E-35 5.3E-40 297.2 19.0 254 437-707 1-256 (257)
303 cd05122 PKc_STE Catalytic doma 100.0 7.1E-35 1.5E-39 292.8 22.0 250 437-705 1-251 (253)
304 cd07860 STKc_CDK2_3 Catalytic 100.0 2.4E-35 5.1E-40 302.0 18.8 264 437-707 1-283 (284)
305 cd06617 PKc_MKK3_6 Catalytic d 100.0 4E-35 8.7E-40 300.2 20.4 256 436-707 1-263 (283)
306 KOG0986 G protein-coupled rece 100.0 2E-36 4.4E-41 298.1 10.0 257 434-705 183-446 (591)
307 cd07832 STKc_CCRK Catalytic do 100.0 5.1E-35 1.1E-39 299.9 20.8 263 437-707 1-284 (286)
308 cd07836 STKc_Pho85 Catalytic d 100.0 4.2E-35 9.1E-40 300.2 20.1 263 437-706 1-282 (284)
309 cd07843 STKc_CDC2L1 Catalytic 100.0 4E-35 8.6E-40 301.7 19.9 263 436-706 5-291 (293)
310 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.1E-34 2.5E-39 295.2 22.8 254 438-707 1-270 (273)
311 cd07833 STKc_CDKL Catalytic do 100.0 2.4E-35 5.2E-40 302.7 17.6 263 436-706 1-286 (288)
312 cd07835 STKc_CDK1_like Catalyt 100.0 2.6E-35 5.6E-40 301.6 17.4 263 438-707 1-282 (283)
313 cd06657 STKc_PAK4 Catalytic do 100.0 4.6E-35 1E-39 300.3 19.2 245 441-705 25-270 (292)
314 KOG1035 eIF-2alpha kinase GCN2 100.0 1E-35 2.2E-40 325.5 14.9 255 433-705 476-871 (1351)
315 cd05633 STKc_GRK3 Catalytic do 100.0 5.8E-35 1.3E-39 297.8 19.7 247 443-707 1-257 (279)
316 cd05578 STKc_Yank1 Catalytic d 100.0 1.7E-35 3.7E-40 298.5 15.4 253 437-706 1-256 (258)
317 KOG0690 Serine/threonine prote 100.0 5.1E-36 1.1E-40 283.0 10.5 253 434-705 166-424 (516)
318 cd07837 STKc_CdkB_plant Cataly 100.0 6.6E-35 1.4E-39 300.5 19.8 266 436-707 1-293 (295)
319 cd06606 STKc_MAPKKK Catalytic 100.0 2.2E-34 4.7E-39 290.6 23.1 254 437-708 1-260 (260)
320 cd05572 STKc_cGK_PKG Catalytic 100.0 1E-34 2.2E-39 293.5 20.7 246 444-707 1-254 (262)
321 cd08215 STKc_Nek Catalytic dom 100.0 2E-34 4.3E-39 290.6 22.2 255 437-707 1-257 (258)
322 cd06616 PKc_MKK4 Catalytic dom 100.0 8.5E-35 1.8E-39 298.5 19.4 257 436-706 4-268 (288)
323 KOG0604 MAP kinase-activated p 100.0 1.6E-35 3.4E-40 277.2 12.5 258 433-708 58-325 (400)
324 cd06635 STKc_TAO1 Catalytic do 100.0 3E-34 6.4E-39 298.3 23.3 251 436-707 25-279 (317)
325 cd07845 STKc_CDK10 Catalytic d 100.0 8.5E-35 1.8E-39 301.5 19.2 265 435-707 6-292 (309)
326 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-34 2.4E-39 292.2 19.0 252 437-706 1-254 (256)
327 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-34 2.9E-39 292.3 19.5 245 442-705 2-251 (260)
328 KOG0586 Serine/threonine prote 100.0 6.3E-35 1.4E-39 300.1 17.0 253 435-708 55-309 (596)
329 cd06627 STKc_Cdc7_like Catalyt 100.0 3.6E-34 7.8E-39 288.1 22.3 250 437-705 1-251 (254)
330 cd07850 STKc_JNK Catalytic dom 100.0 2.9E-34 6.3E-39 303.0 22.6 261 434-706 14-312 (353)
331 PLN00009 cyclin-dependent kina 100.0 2.1E-34 4.6E-39 296.4 21.0 264 436-706 2-285 (294)
332 KOG0666 Cyclin C-dependent kin 100.0 1.3E-35 2.9E-40 278.8 9.6 203 436-644 24-242 (438)
333 KOG0200 Fibroblast/platelet-de 100.0 2.1E-34 4.5E-39 320.1 20.8 257 435-707 295-577 (609)
334 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.6E-34 9.9E-39 289.0 21.2 254 436-706 2-262 (264)
335 KOG4250 TANK binding protein k 100.0 4.7E-35 1E-39 305.0 14.1 254 437-697 14-296 (732)
336 cd07842 STKc_CDK8_like Catalyt 100.0 5.3E-34 1.1E-38 296.9 22.2 266 437-707 1-315 (316)
337 PHA02882 putative serine/threo 100.0 4.2E-34 9.1E-39 293.6 20.9 259 436-706 12-293 (294)
338 cd06618 PKc_MKK7 Catalytic dom 100.0 2.7E-34 5.8E-39 295.9 19.5 256 435-707 14-275 (296)
339 PHA03210 serine/threonine kina 100.0 1.6E-34 3.4E-39 316.7 18.5 270 434-707 146-456 (501)
340 cd05579 STKc_MAST_like Catalyt 100.0 1.9E-34 4.2E-39 292.0 17.8 245 444-705 1-257 (265)
341 cd05613 STKc_MSK1_N N-terminal 100.0 2.3E-34 5E-39 295.5 18.6 255 437-705 1-268 (290)
342 cd07849 STKc_ERK1_2_like Catal 100.0 1.6E-34 3.5E-39 302.9 17.3 261 435-706 4-293 (336)
343 cd07840 STKc_CDK9_like Catalyt 100.0 3.8E-34 8.2E-39 293.6 19.6 262 438-707 1-286 (287)
344 cd08226 PK_STRAD_beta Pseudoki 100.0 7.3E-34 1.6E-38 296.9 22.0 258 442-707 4-310 (328)
345 cd07838 STKc_CDK4_6_like Catal 100.0 1.3E-33 2.7E-38 289.7 23.3 261 438-706 1-285 (287)
346 PHA03390 pk1 serine/threonine- 100.0 7.9E-34 1.7E-38 287.4 21.5 252 429-707 7-264 (267)
347 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.8E-34 4E-39 302.5 17.4 263 435-706 4-292 (337)
348 cd05118 STKc_CMGC Catalytic do 100.0 5.5E-34 1.2E-38 291.7 20.5 263 438-708 1-283 (283)
349 cd05583 STKc_MSK_N N-terminal 100.0 1.9E-34 4.2E-39 295.8 16.6 255 437-705 1-263 (288)
350 cd07831 STKc_MOK Catalytic dom 100.0 6.8E-34 1.5E-38 290.9 20.6 259 438-707 1-281 (282)
351 cd07855 STKc_ERK5 Catalytic do 100.0 1.7E-34 3.7E-39 302.4 16.5 265 435-708 4-297 (334)
352 cd08216 PK_STRAD Pseudokinase 100.0 3.8E-34 8.2E-39 297.5 18.9 261 440-707 6-297 (314)
353 cd05581 STKc_PDK1 Catalytic do 100.0 2.6E-34 5.6E-39 293.7 17.3 253 436-707 1-279 (280)
354 cd05606 STKc_beta_ARK Catalyti 100.0 6.3E-34 1.4E-38 290.1 20.1 247 443-707 1-257 (278)
355 KOG4645 MAPKKK (MAP kinase kin 100.0 6.2E-36 1.3E-40 328.6 5.6 254 434-705 1233-1494(1509)
356 cd07852 STKc_MAPK15 Catalytic 100.0 4.1E-34 8.9E-39 300.1 18.9 262 434-705 5-295 (337)
357 cd07864 STKc_CDK12 Catalytic d 100.0 5.4E-34 1.2E-38 294.7 19.4 267 433-707 4-301 (302)
358 cd06634 STKc_TAO2 Catalytic do 100.0 6.5E-34 1.4E-38 294.4 19.9 251 436-707 15-269 (308)
359 cd06633 STKc_TAO3 Catalytic do 100.0 1.4E-33 3.1E-38 292.5 22.0 248 438-706 23-274 (313)
360 PTZ00024 cyclin-dependent prot 100.0 8.9E-34 1.9E-38 297.4 20.1 265 436-707 8-315 (335)
361 cd07865 STKc_CDK9 Catalytic do 100.0 1.7E-33 3.7E-38 292.2 21.9 265 435-707 11-309 (310)
362 cd07834 STKc_MAPK Catalytic do 100.0 4.7E-34 1E-38 299.0 17.2 262 437-707 1-291 (330)
363 cd08222 STKc_Nek11 Catalytic d 100.0 4.8E-34 1E-38 288.3 16.4 256 437-707 1-259 (260)
364 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.4E-33 3E-38 294.1 19.7 262 432-706 6-289 (328)
365 cd05123 STKc_AGC Catalytic dom 100.0 2E-33 4.4E-38 281.9 19.8 245 444-707 1-249 (250)
366 cd07830 STKc_MAK_like Catalyti 100.0 2.4E-33 5.3E-38 287.0 19.8 261 438-707 1-282 (283)
367 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.9E-33 6.4E-38 294.0 20.4 265 429-706 10-301 (345)
368 cd07879 STKc_p38delta_MAPK13 C 100.0 2.5E-33 5.4E-38 294.4 19.1 257 435-705 14-297 (342)
369 KOG1024 Receptor-like protein 100.0 2.8E-33 6E-38 270.9 17.5 260 430-706 278-552 (563)
370 cd07829 STKc_CDK_like Catalyti 100.0 2.2E-33 4.7E-38 287.2 17.9 262 438-707 1-281 (282)
371 cd07866 STKc_BUR1 Catalytic do 100.0 2.3E-33 5E-38 291.3 17.8 265 435-707 7-310 (311)
372 cd07880 STKc_p38gamma_MAPK12 C 100.0 4E-33 8.7E-38 292.8 19.8 262 432-706 11-299 (343)
373 KOG0662 Cyclin-dependent kinas 100.0 1.3E-33 2.7E-38 244.9 12.5 261 437-705 3-283 (292)
374 cd05610 STKc_MASTL Catalytic d 100.0 6.4E-33 1.4E-37 313.3 22.1 149 435-590 3-152 (669)
375 KOG4236 Serine/threonine prote 100.0 2.4E-34 5.2E-39 287.5 9.0 249 441-707 569-821 (888)
376 cd07851 STKc_p38 Catalytic dom 100.0 1.8E-33 4E-38 295.5 16.3 261 434-707 13-300 (343)
377 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.3E-33 7.1E-38 293.5 15.9 259 436-706 5-301 (342)
378 KOG0696 Serine/threonine prote 100.0 7.6E-34 1.7E-38 276.2 10.0 244 435-697 348-593 (683)
379 KOG0612 Rho-associated, coiled 100.0 3.3E-34 7.2E-39 311.2 7.8 258 431-706 70-339 (1317)
380 cd07857 STKc_MPK1 Catalytic do 100.0 1.1E-32 2.5E-37 288.4 18.7 261 437-706 1-293 (332)
381 KOG1006 Mitogen-activated prot 100.0 4.9E-35 1.1E-39 269.4 0.6 255 437-705 65-327 (361)
382 KOG0587 Traf2- and Nck-interac 100.0 7.9E-33 1.7E-37 293.8 17.1 257 429-705 12-282 (953)
383 cd05576 STKc_RPK118_like Catal 100.0 3E-32 6.4E-37 270.8 18.6 225 447-705 4-234 (237)
384 KOG0671 LAMMER dual specificit 100.0 1.8E-33 3.8E-38 272.9 8.5 267 426-705 79-406 (415)
385 KOG0444 Cytoskeletal regulator 100.0 3.7E-35 8E-40 298.8 -3.8 349 1-356 31-382 (1255)
386 KOG0603 Ribosomal protein S6 k 100.0 7.8E-33 1.7E-37 286.4 13.2 242 435-707 321-565 (612)
387 KOG0695 Serine/threonine prote 100.0 7.7E-33 1.7E-37 262.4 11.9 252 435-697 249-502 (593)
388 KOG1151 Tousled-like protein k 100.0 7.9E-33 1.7E-37 271.3 10.4 257 436-704 463-740 (775)
389 KOG0669 Cyclin T-dependent kin 100.0 3.4E-33 7.3E-38 255.1 4.0 265 435-707 16-317 (376)
390 KOG0614 cGMP-dependent protein 100.0 6.8E-33 1.5E-37 276.3 4.7 255 435-707 419-679 (732)
391 smart00220 S_TKc Serine/Threon 100.0 7.4E-31 1.6E-35 261.8 18.4 241 448-706 1-242 (244)
392 KOG0444 Cytoskeletal regulator 100.0 9.1E-34 2E-38 288.7 -3.9 323 1-331 54-380 (1255)
393 PLN03224 probable serine/threo 100.0 1.3E-30 2.7E-35 279.2 19.2 270 434-708 143-503 (507)
394 PLN03225 Serine/threonine-prot 100.0 5.9E-31 1.3E-35 289.7 16.7 262 434-707 130-452 (566)
395 KOG0984 Mitogen-activated prot 100.0 4.7E-31 1E-35 234.4 9.5 204 433-643 43-253 (282)
396 KOG1027 Serine/threonine prote 100.0 2.7E-31 5.7E-36 280.9 9.1 245 438-705 511-767 (903)
397 KOG0472 Leucine-rich repeat pr 100.0 4.3E-34 9.3E-39 277.5 -11.8 340 1-349 67-541 (565)
398 KOG1290 Serine/threonine prote 100.0 4E-30 8.7E-35 256.2 16.0 261 436-708 78-553 (590)
399 KOG0668 Casein kinase II, alph 100.0 1.2E-30 2.5E-35 235.3 10.6 254 435-705 37-322 (338)
400 KOG0608 Warts/lats-like serine 100.0 3.4E-30 7.4E-35 263.1 13.2 210 428-644 618-873 (1034)
401 cd00180 PKc Catalytic domain o 100.0 4.8E-28 1E-32 235.9 21.7 212 444-706 1-215 (215)
402 KOG0670 U4/U6-associated splic 100.0 5.5E-30 1.2E-34 256.3 7.4 276 420-706 416-747 (752)
403 KOG0664 Nemo-like MAPK-related 100.0 1E-30 2.2E-35 241.5 1.6 261 437-706 54-344 (449)
404 KOG0472 Leucine-rich repeat pr 100.0 4.6E-32 1E-36 263.5 -7.8 269 50-327 184-542 (565)
405 KOG0665 Jun-N-terminal kinase 100.0 1.8E-29 3.9E-34 239.3 8.5 257 436-705 17-310 (369)
406 KOG0576 Mitogen-activated prot 100.0 1.2E-29 2.6E-34 261.5 3.5 252 436-705 15-271 (829)
407 KOG1152 Signal transduction se 100.0 1E-28 2.2E-33 250.5 9.1 201 435-643 560-770 (772)
408 KOG1345 Serine/threonine kinas 99.9 4.4E-28 9.4E-33 224.3 7.6 250 435-703 23-282 (378)
409 smart00221 STYKc Protein kinas 99.9 3.4E-26 7.5E-31 225.3 19.2 198 438-643 1-201 (225)
410 KOG1167 Serine/threonine prote 99.9 2.1E-26 4.5E-31 227.2 9.2 199 429-642 29-278 (418)
411 smart00750 KIND kinase non-cat 99.9 2.7E-25 5.8E-30 210.0 13.3 162 521-707 1-167 (176)
412 PLN00181 protein SPA1-RELATED; 99.9 3.7E-26 8E-31 265.2 8.1 199 491-708 27-268 (793)
413 KOG0618 Serine/threonine phosp 99.9 2.4E-27 5.2E-32 253.4 -2.6 222 122-350 242-490 (1081)
414 KOG4237 Extracellular matrix p 99.9 1.1E-27 2.4E-32 233.0 -5.7 299 49-347 67-380 (498)
415 KOG4237 Extracellular matrix p 99.9 4.1E-27 8.8E-32 229.0 -4.1 274 77-353 50-363 (498)
416 KOG0618 Serine/threonine phosp 99.9 2.1E-26 4.6E-31 246.3 -3.3 333 4-349 47-465 (1081)
417 PRK15387 E3 ubiquitin-protein 99.9 1.5E-23 3.3E-28 232.2 16.8 263 4-309 203-465 (788)
418 PLN03210 Resistant to P. syrin 99.9 6.4E-23 1.4E-27 245.2 21.5 331 1-345 557-902 (1153)
419 KOG1164 Casein kinase (serine/ 99.9 5.6E-23 1.2E-27 212.8 17.3 254 437-706 19-294 (322)
420 KOG1163 Casein kinase (serine/ 99.9 1.4E-23 3.1E-28 191.2 9.7 257 435-708 14-283 (341)
421 KOG0195 Integrin-linked kinase 99.9 4.8E-24 1E-28 197.4 6.4 249 436-707 190-444 (448)
422 PRK15387 E3 ubiquitin-protein 99.9 5.9E-23 1.3E-27 227.6 15.2 263 26-331 201-463 (788)
423 PRK09188 serine/threonine prot 99.9 1.2E-22 2.5E-27 208.8 15.4 170 432-617 14-195 (365)
424 KOG1165 Casein kinase (serine/ 99.9 2.4E-22 5.1E-27 191.7 15.9 250 436-702 28-292 (449)
425 PLN03210 Resistant to P. syrin 99.9 8.7E-22 1.9E-26 235.5 22.4 307 2-324 589-904 (1153)
426 KOG1240 Protein kinase contain 99.9 2.3E-23 5E-28 226.5 5.8 247 437-706 24-292 (1431)
427 COG0515 SPS1 Serine/threonine 99.9 2.1E-20 4.6E-25 196.3 21.2 260 438-704 2-274 (384)
428 KOG0590 Checkpoint kinase and 99.9 4.1E-22 8.9E-27 218.6 7.0 259 439-707 321-587 (601)
429 PRK15370 E3 ubiquitin-protein 99.9 2.7E-21 5.8E-26 216.1 13.1 264 27-327 179-446 (754)
430 PRK15370 E3 ubiquitin-protein 99.8 1.8E-21 3.9E-26 217.4 10.4 264 2-302 178-445 (754)
431 PRK10359 lipopolysaccharide co 99.8 5.2E-21 1.1E-25 182.2 10.5 185 423-636 16-216 (232)
432 PF14531 Kinase-like: Kinase-l 99.8 1E-20 2.2E-25 185.7 11.9 237 436-696 12-288 (288)
433 cd05147 RIO1_euk RIO kinase fa 99.8 2.2E-20 4.8E-25 176.7 13.3 144 441-593 2-168 (190)
434 PRK12274 serine/threonine prot 99.8 1.3E-19 2.9E-24 168.4 15.4 187 439-643 5-208 (218)
435 KOG1023 Natriuretic peptide re 99.8 3.2E-20 7E-25 193.7 11.4 209 490-707 1-222 (484)
436 cd05145 RIO1_like RIO kinase f 99.8 1.9E-19 4.2E-24 171.2 15.6 143 441-593 2-168 (190)
437 cd00116 LRR_RI Leucine-rich re 99.8 1.7E-21 3.8E-26 202.9 -4.2 260 66-325 16-319 (319)
438 KOG0603 Ribosomal protein S6 k 99.8 1.5E-20 3.3E-25 195.5 2.4 227 443-699 1-232 (612)
439 cd00116 LRR_RI Leucine-rich re 99.8 1.5E-21 3.3E-26 203.3 -6.6 277 6-301 2-319 (319)
440 KOG0617 Ras suppressor protein 99.8 8.9E-21 1.9E-25 164.1 -1.3 179 167-350 31-213 (264)
441 KOG4158 BRPK/PTEN-induced prot 99.8 7.1E-19 1.5E-23 171.9 11.6 195 494-706 274-511 (598)
442 KOG1166 Mitotic checkpoint ser 99.8 1.9E-18 4.1E-23 192.9 12.9 199 430-641 692-902 (974)
443 PRK10345 hypothetical protein; 99.8 7.6E-18 1.6E-22 160.6 14.1 138 438-590 4-158 (210)
444 KOG0617 Ras suppressor protein 99.7 4.4E-20 9.6E-25 159.8 -3.4 184 141-330 29-216 (264)
445 smart00090 RIO RIO-like kinase 99.7 2.6E-17 5.6E-22 161.2 13.8 147 436-593 28-199 (237)
446 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.2E-18 2.5E-23 178.1 3.4 176 510-705 330-512 (516)
447 PRK14879 serine/threonine prot 99.7 8.6E-17 1.9E-21 156.5 14.9 138 442-591 2-143 (211)
448 cd05144 RIO2_C RIO kinase fami 99.7 1.1E-16 2.3E-21 153.8 14.2 148 430-593 9-176 (198)
449 PRK09605 bifunctional UGMP fam 99.7 4.3E-16 9.3E-21 172.5 18.8 142 435-592 332-477 (535)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 2.1E-16 4.6E-21 152.2 14.2 135 443-592 1-139 (199)
451 KOG0606 Microtubule-associated 99.7 8.3E-17 1.8E-21 176.1 6.0 206 436-697 83-304 (1205)
452 cd05120 APH_ChoK_like Aminogly 99.6 4.8E-15 1E-19 136.0 13.0 135 440-591 2-138 (155)
453 cd05119 RIO RIO kinase family, 99.6 5.3E-15 1.1E-19 140.9 12.5 140 441-593 2-165 (187)
454 KOG0590 Checkpoint kinase and 99.6 1.4E-16 3.1E-21 175.1 0.3 255 436-704 20-285 (601)
455 PRK01723 3-deoxy-D-manno-octul 99.6 1.1E-14 2.4E-19 143.0 12.9 141 441-593 36-193 (239)
456 KOG0532 Leucine-rich repeat (L 99.5 1.2E-15 2.7E-20 156.1 -1.6 197 126-331 55-252 (722)
457 TIGR01982 UbiB 2-polyprenylphe 99.4 5.3E-13 1.2E-17 142.6 13.1 146 441-594 122-309 (437)
458 KOG1266 Protein kinase [Signal 99.4 1.2E-13 2.7E-18 132.5 7.1 201 490-706 121-332 (458)
459 PLN03150 hypothetical protein; 99.4 3.9E-13 8.5E-18 150.4 11.0 118 242-360 419-538 (623)
460 COG4886 Leucine-rich repeat (L 99.4 2.4E-13 5.2E-18 145.7 8.1 197 77-282 97-294 (394)
461 KOG0532 Leucine-rich repeat (L 99.4 8.2E-15 1.8E-19 150.1 -5.1 172 98-278 76-247 (722)
462 COG4886 Leucine-rich repeat (L 99.4 5.5E-13 1.2E-17 142.9 7.2 263 53-328 97-360 (394)
463 KOG1909 Ran GTPase-activating 99.4 1.8E-14 3.9E-19 139.7 -4.9 234 93-326 26-311 (382)
464 KOG1909 Ran GTPase-activating 99.4 1.1E-14 2.3E-19 141.2 -6.5 162 69-230 88-283 (382)
465 KOG0601 Cyclin-dependent kinas 99.3 1.2E-12 2.5E-17 137.4 7.0 250 436-705 114-379 (524)
466 PRK04750 ubiB putative ubiquin 99.3 6.7E-12 1.4E-16 135.5 12.2 148 435-593 119-315 (537)
467 KOG1259 Nischarin, modulator o 99.3 2.6E-13 5.7E-18 128.4 1.1 208 16-231 204-413 (490)
468 KOG3207 Beta-tubulin folding c 99.3 9.4E-14 2E-18 138.4 -2.8 161 94-254 118-284 (505)
469 KOG1259 Nischarin, modulator o 99.3 4.1E-13 8.8E-18 127.2 0.4 223 25-256 181-414 (490)
470 KOG3207 Beta-tubulin folding c 99.3 4.1E-13 9E-18 133.8 0.3 208 71-279 119-340 (505)
471 cd05146 RIO3_euk RIO kinase fa 99.3 6.4E-11 1.4E-15 110.7 14.1 141 441-593 2-175 (197)
472 cd05151 ChoK Choline Kinase (C 99.3 1.7E-11 3.7E-16 114.7 10.4 131 441-591 3-136 (170)
473 KOG1243 Protein kinase [Genera 99.3 4.6E-11 1E-15 126.4 13.6 168 456-639 33-200 (690)
474 KOG0531 Protein phosphatase 1, 99.3 5.8E-13 1.3E-17 142.8 -1.0 195 72-278 71-268 (414)
475 KOG0531 Protein phosphatase 1, 99.2 6.4E-13 1.4E-17 142.5 -1.7 244 49-306 72-322 (414)
476 COG3642 Mn2+-dependent serine/ 99.2 1.6E-10 3.4E-15 103.7 13.3 134 443-591 3-140 (204)
477 PF14580 LRR_9: Leucine-rich r 99.2 6.6E-12 1.4E-16 114.9 4.2 125 191-321 17-148 (175)
478 PF14580 LRR_9: Leucine-rich r 99.2 9.7E-12 2.1E-16 113.9 3.7 106 96-206 18-126 (175)
479 KOG0601 Cyclin-dependent kinas 99.2 2.6E-11 5.5E-16 127.4 5.6 248 433-706 262-515 (524)
480 COG4248 Uncharacterized protei 99.2 1.6E-09 3.4E-14 108.3 17.2 255 439-706 14-297 (637)
481 KOG3087 Serine/threonine prote 99.1 1E-09 2.2E-14 97.9 13.9 148 440-592 11-166 (229)
482 PLN03150 hypothetical protein; 99.1 1.2E-10 2.6E-15 130.5 8.5 113 218-330 419-532 (623)
483 cd05154 ACAD10_11_like Acyl-Co 99.1 7.9E-10 1.7E-14 108.4 12.9 143 442-591 4-206 (223)
484 PF13855 LRR_8: Leucine rich r 99.0 4.4E-10 9.6E-15 84.6 4.4 59 98-156 2-60 (61)
485 KOG4658 Apoptotic ATPase [Sign 99.0 3.2E-10 7E-15 129.7 5.2 132 23-156 520-653 (889)
486 KOG4658 Apoptotic ATPase [Sign 99.0 1.7E-10 3.8E-15 131.9 2.2 270 4-280 525-809 (889)
487 PF13855 LRR_8: Leucine rich r 99.0 6.7E-10 1.5E-14 83.6 4.3 61 121-181 1-61 (61)
488 KOG0606 Microtubule-associated 98.9 1.9E-10 4.2E-15 127.0 1.2 251 434-700 802-1084(1205)
489 PF01163 RIO1: RIO1 family; I 98.9 1.4E-08 3.1E-13 94.8 12.8 130 451-593 1-157 (188)
490 PRK15123 lipopolysaccharide co 98.9 2.3E-08 5E-13 99.3 15.0 144 443-591 29-194 (268)
491 KOG2982 Uncharacterized conser 98.9 1.8E-10 3.9E-15 109.4 -1.3 207 96-302 44-262 (418)
492 COG0478 RIO-like serine/threon 98.8 2.6E-08 5.7E-13 95.1 10.5 139 438-591 93-251 (304)
493 KOG3741 Poly(A) ribonuclease s 98.8 1.4E-07 3.1E-12 97.2 16.2 170 448-641 288-475 (655)
494 KOG1859 Leucine-rich repeat pr 98.8 8.1E-11 1.8E-15 124.3 -7.7 183 138-329 102-295 (1096)
495 PRK09902 hypothetical protein; 98.7 2.4E-07 5.2E-12 86.8 14.3 142 444-590 26-178 (216)
496 KOG1859 Leucine-rich repeat pr 98.7 4.8E-10 1E-14 118.6 -4.7 179 90-278 102-292 (1096)
497 COG5238 RNA1 Ran GTPase-activa 98.7 1.1E-09 2.3E-14 103.0 -2.6 231 96-326 29-316 (388)
498 KOG2982 Uncharacterized conser 98.7 3E-09 6.5E-14 101.3 -0.4 207 23-230 42-262 (418)
499 COG0661 AarF Predicted unusual 98.6 2.5E-07 5.5E-12 99.5 12.6 145 442-594 131-317 (517)
500 KOG2137 Protein kinase [Signal 98.6 8.9E-09 1.9E-13 109.9 1.4 150 545-704 105-264 (700)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.9e-83 Score=763.46 Aligned_cols=679 Identities=31% Similarity=0.515 Sum_probs=488.6
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEe
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFG 79 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 79 (708)
|++|++|+|++|++++..|..|+++++|++|+|++|++.+.+|..+.. ++|+.|++++|.+.+.+|..+..+++|++|+
T Consensus 235 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 314 (968)
T PLN00113 235 LTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILH 314 (968)
T ss_pred CCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEE
Confidence 467888888888888778888888888888888888887777766654 6788888888888777777777788888888
Q ss_pred ccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccc
Q 039322 80 VSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITG 159 (708)
Q Consensus 80 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 159 (708)
+++|.+++..|..+.++++|+.|+|++|.+++..+..+..+++|+.|++++|++.+..+..+..+++|+.|++++|.+.+
T Consensus 315 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~ 394 (968)
T PLN00113 315 LFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEG 394 (968)
T ss_pred CCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecc
Confidence 88888877777777777888888888887777777777777777777777777766655555555555555555555544
Q ss_pred cCCccc------------------------cCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCC
Q 039322 160 GIPREI------------------------GNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGS 215 (708)
Q Consensus 160 ~~~~~~------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 215 (708)
..|..+ ..+++|+.|++++|.+++..+..+..+++|+.|+|++|++.+..|..+ .
T Consensus 395 ~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~ 473 (968)
T PLN00113 395 EIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-G 473 (968)
T ss_pred cCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-c
Confidence 444444 444445555555555544444444455555555555555554444433 3
Q ss_pred CCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCcee
Q 039322 216 LVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLN 295 (708)
Q Consensus 216 ~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~ 295 (708)
.++|+.|++++|++++..|..+..+++|+.|+|++|++.+..|..+..+++|+.|+|++|.+++..|..+..+++|+.|+
T Consensus 474 ~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 553 (968)
T PLN00113 474 SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLD 553 (968)
T ss_pred cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEE
Confidence 45677777777777777787888888899999999999888888898899999999999999988888899999999999
Q ss_pred cccccccCCCCCcccccccccEEecCCCcCCCCCCCccccccCcccccccccCcCCCCC--CCCCccccccCCCCCccee
Q 039322 296 LSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGGVK--GMQPCKVFLSHKQNSRVKW 373 (708)
Q Consensus 296 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~--~~~~~~~~~~~~~~~~~~~ 373 (708)
|++|++++.+|..+..+++|+.+++++|++.+.+|....+..+...++.+|+..|+... ..++|... .....|
T Consensus 554 Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~-----~~~~~~ 628 (968)
T PLN00113 554 LSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV-----RKTPSW 628 (968)
T ss_pred CCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc-----ccccee
Confidence 99999998899999999999999999999999888877777788888999999998643 23455321 122334
Q ss_pred EeeehhhHHHHHHHH-HHHHHHHhhhcCCCCCCCCCCCCCCCCcceec-ccCCCchHHHHHHHhccccccceeccccCcc
Q 039322 374 FAIVFPVLGALFLSM-ALIAIFILRKRKSDSGDRQSSNQNPHGLFSIL-NFEGKLVYDEIVRATNDFDAQYCIGNGGHGS 451 (708)
Q Consensus 374 ~~i~~~~~~~~~~~~-~~~~~~~~r~R~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~ 451 (708)
..+++++++++++++ ++++++++++|+..+..+........+..... .......++++ ...|...+.||+|+||.
T Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~ 705 (968)
T PLN00113 629 WFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGA 705 (968)
T ss_pred eeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHH---HhhCCcccEEccCCCee
Confidence 444444444433333 33333333333222111111100000000000 01112333443 35677888999999999
Q ss_pred EEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCCHHHHhccc
Q 039322 452 VYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSD 530 (708)
Q Consensus 452 vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~ 530 (708)
||+|.. .+++.||||.+..... ....|++.+++++||||++++|++.+++..++||||+++|+|.++++
T Consensus 706 Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-- 775 (968)
T PLN00113 706 SYKGKSIKNGMQFVVKEINDVNS--------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR-- 775 (968)
T ss_pred EEEEEECCCCcEEEEEEccCCcc--------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh--
Confidence 999975 5789999999865211 11235788999999999999999999999999999999999999995
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccC
Q 039322 531 TAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610 (708)
Q Consensus 531 ~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~a 610 (708)
.++|.++.+++.|+|+|++|||..+.++|+|||+||+||+++.++..++. ||.+...... ....+++.|+|
T Consensus 776 ----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~a 846 (968)
T PLN00113 776 ----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVA 846 (968)
T ss_pred ----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC----CCccccccccC
Confidence 27899999999999999999996656699999999999999999888875 6655433211 22367899999
Q ss_pred ccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc------ccccccccccccCCCCCCCCchhHHHHHHHHHH
Q 039322 611 PELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS------SLNTDIALDEILDPRLPPPSRSVQEKLISIMEV 684 (708)
Q Consensus 611 PE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 684 (708)
||++.+..++.++|||||||++|||+||+.||+........ ..........+.++...........+..++.++
T Consensus 847 PE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 926 (968)
T PLN00113 847 PETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNL 926 (968)
T ss_pred cccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999998632111000 000111223344555443333344556678899
Q ss_pred HHhccCCCCCCCCCHHHHHHHhh
Q 039322 685 AFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 685 i~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+||+.||++||||+||++.|+
T Consensus 927 ~~~Cl~~~P~~RPt~~evl~~L~ 949 (968)
T PLN00113 927 ALHCTATDPTARPCANDVLKTLE 949 (968)
T ss_pred HHhhCcCCchhCcCHHHHHHHHH
Confidence 99999999999999999999875
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-50 Score=412.30 Aligned_cols=280 Identities=40% Similarity=0.703 Sum_probs=235.5
Q ss_pred CCCchHHHHHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEE
Q 039322 423 EGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502 (708)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~ 502 (708)
...++|+++..||++|...+.||+|+||.||+|...+|+.||||++...... . ..+|..|++++.+++|||+|+++
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~---~-~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ---G-EREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc---c-hhHHHHHHHHHhcCCCcCcccEE
Confidence 4568999999999999999999999999999999999999999987753211 1 45599999999999999999999
Q ss_pred EEEeeCC-eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 039322 503 GFCSHAR-HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA 581 (708)
Q Consensus 503 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 581 (708)
|||.+.+ +.++|||||++|+|.++++..... .++|.+|.+||.++|+||+|||+.+.|.|+|||||++|||+|+++++
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 9999988 599999999999999999876543 78999999999999999999999988889999999999999999999
Q ss_pred EEeecccccccCCCCCccccc-cccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccc-------ccccc
Q 039322 582 HVADFGIAKFLKPESSNWTEF-AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLI-------SSSSL 653 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-------~~~~~ 653 (708)
||+|||+|+............ .||.+|+|||+...+..+.|+||||||+++.|++||+.|.+..... +....
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 999999996544312222222 8999999999999999999999999999999999999987743211 11112
Q ss_pred ccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+....+++|+++.............+..++.+|++.+|++||+|.||++.|+
T Consensus 297 ~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 297 LEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred HHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 223367889998876322222256777999999999999999999999998874
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-47 Score=372.27 Aligned_cols=258 Identities=28% Similarity=0.397 Sum_probs=217.4
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC-eeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR-HSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~-~~~l 513 (708)
.+++..+.||+|..|+||++.++ +++.+|+|++... -+.+.++++.+|++++++.+||+||.++|.|..+. ...+
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~---~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI 155 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN---IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI 155 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc---CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence 46677788999999999999764 6889999999543 23456789999999999999999999999999998 5999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
+||||++|+|++++... +++++....+++.+|++||.|||+.+ +||||||||+|||++..|+|||||||.+....
T Consensus 156 ~mEYMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred ehhhcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 99999999999999765 34899999999999999999999742 99999999999999999999999999998775
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.. .....+||..|||||.+.+..|+.++||||||+.++|+.+|+.||... ..........+..+.+...+..+..
T Consensus 231 nS--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~---~~~~~~~~~Ll~~Iv~~ppP~lP~~ 305 (364)
T KOG0581|consen 231 NS--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP---NPPYLDIFELLCAIVDEPPPRLPEG 305 (364)
T ss_pred hh--hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc---CCCCCCHHHHHHHHhcCCCCCCCcc
Confidence 43 456789999999999999999999999999999999999999998743 1112223445566666444433332
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
....++..++..|+++||.+|||++|+++|-+|
T Consensus 306 --~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi 338 (364)
T KOG0581|consen 306 --EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFI 338 (364)
T ss_pred --cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHH
Confidence 344568888889999999999999999998654
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-47 Score=389.05 Aligned_cols=251 Identities=25% Similarity=0.445 Sum_probs=218.3
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|...+.||+|+|+.||.++. .+|+.||+|++.+..- ......+.+.+|+++.++++|||||+++++|++.+..|+|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l-~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL-KKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHh-cCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 5799999999999999999976 7899999999987322 2335577899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
.|+|+.++|..+++.+ +.+++++++.+++||+.|+.|||++ +|+|||||..|+|++++.++||+|||+|.....
T Consensus 97 LELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EEecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999999744 4599999999999999999999999 999999999999999999999999999999998
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
+++.....+|||.|.|||++.....+..+||||+||++|-|+.|++||+.. ...+....+.......+..
T Consensus 171 ~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk--------~vkety~~Ik~~~Y~~P~~-- 240 (592)
T KOG0575|consen 171 DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK--------TVKETYNKIKLNEYSMPSH-- 240 (592)
T ss_pred cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc--------hHHHHHHHHHhcCcccccc--
Confidence 888888899999999999999999999999999999999999999999832 1233344444333333321
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
...+-.+||.+++++||.+|||+++|++|
T Consensus 241 --ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 241 --LSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred --cCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 12235688899999999999999999986
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-47 Score=374.26 Aligned_cols=261 Identities=25% Similarity=0.352 Sum_probs=221.2
Q ss_pred HhccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchh---HhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQI---ADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
..+.|.+.+.+|+|+||.|-+| ..++|+.||||++++....... .......+|+++|++++||+||++.++|+.++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 3467888999999999999999 5568999999999874322211 12334579999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC---CcEEEeec
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE---YEAHVADF 586 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Df 586 (708)
..|+||||++||.|.+++-.++. +.+..-..+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 99999999999999999976654 66777889999999999999999 99999999999999766 67999999
Q ss_pred ccccccCCCCCccccccccccccCccccccCCCC---cchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT---EKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEIL 663 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 663 (708)
|+|...+ ........+||+.|.|||++.+..+. .++|+||+||++|-+++|.+||... .......+.+.
T Consensus 324 GlAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~-------~~~~sl~eQI~ 395 (475)
T KOG0615|consen 324 GLAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEE-------YTDPSLKEQIL 395 (475)
T ss_pred chhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccc-------cCCccHHHHHh
Confidence 9999876 45566788999999999999876533 3789999999999999999999732 22222455677
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 664 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.+++...+..+.....+..++|.+|+..||++|||++|+++|-|+
T Consensus 396 ~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~ 440 (475)
T KOG0615|consen 396 KGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWF 440 (475)
T ss_pred cCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhh
Confidence 778877777888888899999999999999999999999998774
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-46 Score=385.71 Aligned_cols=255 Identities=29% Similarity=0.518 Sum_probs=208.6
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC-eeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR-HSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~-~~~lv 514 (708)
.++.....+|+|+||+||+|.+.....||||.+........ ..++|.+|+.+|.+++|||||+++|++.++. ..++|
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~--~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDE--SRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChH--HHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEE
Confidence 44455666999999999999996444499999987543322 2779999999999999999999999999987 79999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEEccCCCCCeeeCCCC-cEEEeeccccccc
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP-IVHQDISSKNLLLDLEY-EAHVADFGIAKFL 592 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-ivH~dlk~~Nill~~~~-~~kl~Dfg~a~~~ 592 (708)
|||+++|+|.++++.. ....+++..+.++|.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++..
T Consensus 119 tEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred EEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence 9999999999999874 345699999999999999999999999 7 99999999999999997 9999999999876
Q ss_pred CCCCCccccccccccccCccccc--cCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc-CCCCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAY--TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEIL-DPRLPP 669 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 669 (708)
.......+...||+.|||||++. ...++.|+||||||+++|||+||+.||..... ......+. ....+.
T Consensus 195 ~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--------~~~~~~v~~~~~Rp~ 266 (362)
T KOG0192|consen 195 VISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--------VQVASAVVVGGLRPP 266 (362)
T ss_pred ccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhcCCCCC
Confidence 54333344478999999999999 56899999999999999999999999985432 11111111 112222
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.. ....+..++.+||+.||++||++.+++..|+
T Consensus 267 ~p~~---~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 267 IPKE---CPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred CCcc---CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 1121 3345778888999999999999999999875
No 7
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-46 Score=382.25 Aligned_cols=251 Identities=25% Similarity=0.473 Sum_probs=209.4
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+.+...+.||+|.||.||.|.++....||+|.++.. .-..+.|.+|+++|++|+|++||+++|+|..++..+|||
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-----~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-----SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-----ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 456778899999999999999987779999999863 234577889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
|||+.|+|.+||.... +..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+...++
T Consensus 281 E~m~~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDD 356 (468)
T ss_pred EecccCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCC
Confidence 9999999999998733 45689999999999999999999999 9999999999999999999999999999954433
Q ss_pred CCcc-ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 596 SSNW-TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 596 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.+.. ....-+..|+|||.+..+.++.|||||||||+||||+| |+.||+.+. ..+.+..+..+..-+.+..
T Consensus 357 ~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms--------n~ev~~~le~GyRlp~P~~ 428 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS--------NEEVLELLERGYRLPRPEG 428 (468)
T ss_pred ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC--------HHHHHHHHhccCcCCCCCC
Confidence 3322 22334689999999999999999999999999999998 999987432 2333444444433333444
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
+++ .+.+++..||+.+|++||||+.+...+
T Consensus 429 CP~---~vY~lM~~CW~~~P~~RPtF~~L~~~l 458 (468)
T KOG0197|consen 429 CPD---EVYELMKSCWHEDPEDRPTFETLREVL 458 (468)
T ss_pred CCH---HHHHHHHHHhhCCcccCCCHHHHHHHH
Confidence 444 477788899999999999999887665
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-47 Score=351.50 Aligned_cols=259 Identities=24% Similarity=0.340 Sum_probs=216.8
Q ss_pred ccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEE-EEeeCCe-eE
Q 039322 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG-FCSHARH-SF 512 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~-~~~~~~~-~~ 512 (708)
.+|++.++||+|.||+||++ ...+|..||.|.+.-. .-+....+....|+.+|++++|||||++++ .|.++.. .+
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~--~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG--MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh--hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 67889999999999999999 5678999999998843 234566788999999999999999999999 4545444 88
Q ss_pred EEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 513 LVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFP-PIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
||||+|..|+|.+.++..+ .++.++++.+|+++.|++.||..+|++..+ -|+||||||.||+++.+|.|||+|||+++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 9999999999999996543 456689999999999999999999995432 27899999999999999999999999999
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
.+..........+|||.||+||.+.+.+|+.+|||||+||++|||+.-+.||... ......+.+.+...++.
T Consensus 177 ~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--------n~~~L~~KI~qgd~~~~ 248 (375)
T KOG0591|consen 177 FLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--------NLLSLCKKIEQGDYPPL 248 (375)
T ss_pred HhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--------cHHHHHHHHHcCCCCCC
Confidence 9987777778899999999999999999999999999999999999999999743 22333445555555443
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
+ ..-.+.++.+||..|+..||+.||+...+++.+
T Consensus 249 p--~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 249 P--DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred c--HHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 2 133456788999999999999999865555544
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-45 Score=358.10 Aligned_cols=201 Identities=30% Similarity=0.491 Sum_probs=181.2
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
..+|...+.||.|+||+||+|+++ ++..||||.+.+.. -..+..+.+..|+.++++++|||||++++++..++..|+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~--l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKK--LNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhc--cCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 478999999999999999999764 58899999987632 134456778999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC------CcEEEeecc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE------YEAHVADFG 587 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg 587 (708)
|||||.||+|.+|++.++ .+++...+.++.|+|.||++||++ +||||||||+|||++.. -.+||+|||
T Consensus 87 VMEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 999999999999998765 489999999999999999999999 99999999999999765 458999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDF 644 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~ 644 (708)
+|+...+ .......+|++-|||||++...+|+.|+|+||+|+++|+|++|+.||+.
T Consensus 161 fAR~L~~-~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 161 FARFLQP-GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhhhCCc-hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 9998873 3455678999999999999999999999999999999999999999983
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.4e-45 Score=343.39 Aligned_cols=262 Identities=23% Similarity=0.360 Sum_probs=210.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+.|+...++|+|+||.||+++++ +|+.||||+|.... ++..-.+-.++|++++++++|+|+|.++++|.....+++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese--dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE--DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC--ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 56888899999999999999776 59999999997532 3445567789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+|||+. ++.+-+.... ..++.+.+.++++|++.|+.|+|++ +++||||||+|||++.+|.+||||||+|+....
T Consensus 80 FE~~dh-TvL~eLe~~p--~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYP--NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred eeecch-HHHHHHHhcc--CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 999988 5555565444 3378899999999999999999999 999999999999999999999999999999887
Q ss_pred CCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc----------------ccc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN----------------TDI 657 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~----------------~~~ 657 (708)
++..++..+.|.+|+|||.+.+ .+|+..+||||+||++.||++|.+-|...+..+..-.+ ...
T Consensus 154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 7778889999999999999887 78999999999999999999999998754432111000 001
Q ss_pred ccccccCCCCCCC---CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 658 ALDEILDPRLPPP---SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 658 ~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.+..+.-|....+ ....+....-+.++++.|++.||.+|++-+|++.|
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 1111111111110 01112223457799999999999999999999865
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-45 Score=353.73 Aligned_cols=253 Identities=25% Similarity=0.386 Sum_probs=213.9
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.++||+|+||.||.++. .+++.||+|++++... ....+.+....|..++.+++||.||+++..|++++.+|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~i-v~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKI-VEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHh-hhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 47899999999999999999954 4689999999988432 222456788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
|+||+.||.|..+|++.+ .+++..+.-++..|+.||.|||++ |||||||||+|||+|++|+++|+|||+++...
T Consensus 103 Vld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 999999999999997554 489999999999999999999999 99999999999999999999999999999665
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..+......+||+.|||||++.+..++.++|.||+|+++|||++|..||... ......+.+...+....+..
T Consensus 177 ~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~--------~~~~~~~~I~~~k~~~~p~~ 248 (357)
T KOG0598|consen 177 KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE--------DVKKMYDKILKGKLPLPPGY 248 (357)
T ss_pred cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc--------cHHHHHHHHhcCcCCCCCcc
Confidence 5555666789999999999999999999999999999999999999999842 23344455555554433332
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCC----CHHHHHHH
Q 039322 674 VQEKLISIMEVAFSCLNESPESRP----TMKVVTQQ 705 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RP----s~~evl~~ 705 (708)
... +..+++.+.++.||++|- .+.+|.+|
T Consensus 249 ls~---~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 249 LSE---EARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred CCH---HHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 333 366788899999999995 56665543
No 12
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-44 Score=384.80 Aligned_cols=255 Identities=25% Similarity=0.449 Sum_probs=214.8
Q ss_pred ccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
.+....+.||+|+||.||+|+.. +.+.||||.+++. .....+++|.+|++++..++|||||+++|+|.+++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~---a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK---AENQARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc---ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 45667788999999999999643 3567999999874 23346889999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhccccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC
Q 039322 510 HSFLVYELLERGSLAAILSSDTA-----------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE 578 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 578 (708)
..++|+|||..|+|.+||..+.+ ..+++..+.+.||.|||.||.||-++ .+|||||.++|+||.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccc
Confidence 99999999999999999965431 23488999999999999999999999 89999999999999999
Q ss_pred CcEEEeecccccccCCCCCcc-c-cccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccc
Q 039322 579 YEAHVADFGIAKFLKPESSNW-T-EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNT 655 (708)
Q Consensus 579 ~~~kl~Dfg~a~~~~~~~~~~-~-~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~ 655 (708)
..|||+|||+++..-..+++. . ...-+.+|||||.+..++++.+||||||||++||+++ |+.||.. ...
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~g--------lSn 711 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYG--------LSN 711 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccc--------cch
Confidence 999999999999654443332 1 2334689999999999999999999999999999998 9999873 334
Q ss_pred ccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 656 DIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
++.++.+.++++-+.++.++. ++++|+.+||+..|++||+++||-..|+
T Consensus 712 ~EVIe~i~~g~lL~~Pe~CP~---~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 712 QEVIECIRAGQLLSCPENCPT---EVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred HHHHHHHHcCCcccCCCCCCH---HHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 566666777776555554444 5777888999999999999999988774
No 13
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-44 Score=375.22 Aligned_cols=265 Identities=24% Similarity=0.459 Sum_probs=221.2
Q ss_pred cCCCchHHHHHHHhc---------cccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHH
Q 039322 422 FEGKLVYDEIVRATN---------DFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVK 488 (708)
Q Consensus 422 ~~~~~~~~~~~~~~~---------~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~ 488 (708)
+.+.++|++..++.. ...+.++||.|.||.||+|+++ ....||||.++... ..+.+..|+.|+.
T Consensus 606 YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy---tekqrrdFL~EAs 682 (996)
T KOG0196|consen 606 YIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY---TEKQRRDFLSEAS 682 (996)
T ss_pred ecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc---cHHHHhhhhhhhh
Confidence 445667776655544 3467889999999999999764 23469999998643 3456778999999
Q ss_pred HHHhccCCceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccC
Q 039322 489 ALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDI 568 (708)
Q Consensus 489 ~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl 568 (708)
||.++.||||+++.|+....+..+||+|||++|+|+.||+.+. .++++.++..++++||.|++||.+. ++|||||
T Consensus 683 IMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDL 757 (996)
T KOG0196|consen 683 IMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDL 757 (996)
T ss_pred hcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhc---Cchhhhh
Confidence 9999999999999999999999999999999999999998766 4599999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEeecccccccCCCCCcc-cccc--ccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCc
Q 039322 569 SSKNLLLDLEYEAHVADFGIAKFLKPESSNW-TEFA--GTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDF 644 (708)
Q Consensus 569 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~--~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~ 644 (708)
.++|||++.+..+|++|||+++..+++.... +... -+.+|+|||.+...+++.++|||||||+|||.++ |+.||+.
T Consensus 758 AARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd 837 (996)
T KOG0196|consen 758 AARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 837 (996)
T ss_pred hhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc
Confidence 9999999999999999999999887665332 2222 2589999999999999999999999999999996 9999884
Q ss_pred cccccccccccccccccccCC-CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 645 LSLISSSSLNTDIALDEILDP-RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
+. ..+.++++.++ +++++.. ++..|.+|+..||++|-.+||.|.|++..|
T Consensus 838 mS--------NQdVIkaIe~gyRLPpPmD----CP~aL~qLMldCWqkdR~~RP~F~qiV~~l 888 (996)
T KOG0196|consen 838 MS--------NQDVIKAIEQGYRLPPPMD----CPAALYQLMLDCWQKDRNRRPKFAQIVSTL 888 (996)
T ss_pred cc--------hHHHHHHHHhccCCCCCCC----CcHHHHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence 32 24445555444 4555433 334589999999999999999999999876
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-43 Score=355.76 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=214.5
Q ss_pred HHhccccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCe
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARH 510 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~ 510 (708)
+..++|.+++.||+|+|++|++|+ ..+++.||||++.+.... .....+-+..|-++|.+| .||.|++++.-|.++..
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Ii-ke~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYII-KEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHH-hhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 344899999999999999999994 457999999999763221 112345577889999999 79999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
+|+|+||+++|+|.++|++.+ .+++...+.++.+|+.||+|||++ |||||||||+|||+|.|+++||+|||.|.
T Consensus 149 LYFvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccc
Confidence 999999999999999998765 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-----------c--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccc
Q 039322 591 FLKPESS-----------N--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDI 657 (708)
Q Consensus 591 ~~~~~~~-----------~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~ 657 (708)
.+.+... . ....+||..|.+||++..+..+..+|+|+|||++|+|+.|++||.. .+...
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra--------~Neyl 294 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA--------ANEYL 294 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc--------ccHHH
Confidence 7653211 1 1458899999999999999999999999999999999999999973 23344
Q ss_pred ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 658 ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.+++++.-....+.... ....+||++.+..||.+|+|.+|+.+|.
T Consensus 295 iFqkI~~l~y~fp~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 295 IFQKIQALDYEFPEGFP----EDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred HHHHHHHhcccCCCCCC----HHHHHHHHHHHccCccccccHHHHhhCc
Confidence 55555555554443333 3477889999999999999999998873
No 15
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=353.88 Aligned_cols=262 Identities=24% Similarity=0.386 Sum_probs=212.0
Q ss_pred HHHHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 429 DEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 429 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
++++...+++.+...||+|.||+||+|.+. | .||||++....... +..+.|+.|+..+++-+|.||+-+.|||..+
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~--~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTP--EQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCH--HHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 455566678889999999999999999884 4 59999998754433 4788999999999999999999999999998
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
.. .||+.+|+|-+|+.+++... .+++..+.+.||+|||+|+.|||.+ +|||||||..|||+.++++|||+|||+
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred ce-eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccc
Confidence 87 99999999999999998655 5689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCC--CCCccccccccccccCcccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 039322 589 AKFLKP--ESSNWTEFAGTYGYVAPELAYT---MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEIL 663 (708)
Q Consensus 589 a~~~~~--~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 663 (708)
+..-.. .........|...|||||++.. .+|+.++||||||+++|||+||..||..... +.+-...-+-+.
T Consensus 535 atvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~----dqIifmVGrG~l 610 (678)
T KOG0193|consen 535 ATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR----DQIIFMVGRGYL 610 (678)
T ss_pred eeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh----hheEEEeccccc
Confidence 874332 2233455678899999999874 4688999999999999999999999973211 111111111111
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 664 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.++. .........++.+|+..||.+++++||.+.+|+..|+
T Consensus 611 ~pd~---s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 611 MPDL---SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred Cccc---hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 1222 2233445567888999999999999999999998654
No 16
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.7e-42 Score=317.79 Aligned_cols=262 Identities=24% Similarity=0.327 Sum_probs=210.0
Q ss_pred ccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|...+.+|+|.||.||+| ...+|+.||||+++.....++ -.-...+|++.++.++|+||+.++++|.+.+..-+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG--i~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG--INRTALREIKLLQELKHPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC--ccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEE
Confidence 46788899999999999999 556899999999987432222 134578999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+|||+. +|...++... ..++..++..++.++.+|++|||++ .|+|||+||.|+|++++|.+||+|||+|+.+.+
T Consensus 80 fEfm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred EEeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 999986 9999997544 4588999999999999999999999 999999999999999999999999999999988
Q ss_pred CCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-------------ccccccc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-------------NTDIALD 660 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-------------~~~~~~~ 660 (708)
.....+..+.|..|+|||.+.+. .|+..+|+||.||++.||+.|.+-|......+.... -....+.
T Consensus 154 p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 154 PNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred CCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence 87777777899999999988875 589999999999999999999888765432211100 0001111
Q ss_pred cccCCC-CCCC--CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 661 EILDPR-LPPP--SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 661 ~~~~~~-~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
+...-+ .+.+ .........+..+++..++..||.+|.|++|++++
T Consensus 234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111111 1111 11223334456899999999999999999999876
No 17
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-43 Score=355.78 Aligned_cols=250 Identities=25% Similarity=0.410 Sum_probs=212.3
Q ss_pred ccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
..|.....||+|+.|.||.| +..+++.||||++... .....+-+.+|+.+|+..+|+|||++++.|...+..|+|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~----~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR----KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEec----cCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 46777788999999999999 5567889999999752 223456688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||||+||+|.|.+.... +++.++..|++++++||+|||.+ ||+|||||.+|||++.+|.+||+|||++..+..
T Consensus 349 MEym~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred EeecCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 99999999999997654 89999999999999999999999 999999999999999999999999999999888
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
........+||+.|||||+.....|++++||||||++++||+-|+.||=...... .+..+.+ .-.+.....
T Consensus 422 ~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr--------AlyLIa~-ng~P~lk~~ 492 (550)
T KOG0578|consen 422 EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--------ALYLIAT-NGTPKLKNP 492 (550)
T ss_pred ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH--------HHHHHhh-cCCCCcCCc
Confidence 8778888999999999999999999999999999999999999999985322111 1111111 111222223
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
......+.+++.+|+..||++||++.|+++|
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 3344568889999999999999999999987
No 18
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-43 Score=347.05 Aligned_cols=262 Identities=23% Similarity=0.344 Sum_probs=212.4
Q ss_pred HhccccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCC-e
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHAR-H 510 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~-~ 510 (708)
..++|...++||.|+||+||+|+ ..+|+.||||++++.... .+.-.=.+|++.+++++ ||||+++.+++.+.+ .
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s---~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc---HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 45789999999999999999995 457899999999874322 12223468999999998 999999999999888 9
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
+++|||||+. +|++.++.+ .+.+++..+..|++||++||+|+|++ |+.|||+||+|||+.....+||+|||+|+
T Consensus 85 L~fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 85 LYFVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAR 158 (538)
T ss_pred EeeeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccc
Confidence 9999999976 999999876 46799999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccCcccc-ccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-------------ccccccc
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELA-YTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLIS-------------SSSLNTD 656 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~-------------~~~~~~~ 656 (708)
.+... ..++..+.|.+|+|||++ +.+-|+.+.|+||+|||++|+.+-+.-|.+....+ .......
T Consensus 159 ev~Sk-pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg 237 (538)
T KOG0661|consen 159 EVRSK-PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG 237 (538)
T ss_pred ccccC-CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhH
Confidence 77543 445777899999999965 56779999999999999999999999987644321 1111111
Q ss_pred cccccccCCCCCCCCch-----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 657 IALDEILDPRLPPPSRS-----VQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 657 ~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
..+...++-+++..... ......+..+++.+|+++||.+||||+|.+++
T Consensus 238 ~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 238 YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 23334444444433221 12244578899999999999999999999986
No 19
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-42 Score=345.37 Aligned_cols=263 Identities=26% Similarity=0.379 Sum_probs=206.2
Q ss_pred hccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--Cee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~ 511 (708)
.+.|+...+||+|+||.||+| +..+|+.||+|+++.+... ........+|+.+|+++.||||+++.+...+. ...
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~--~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK--EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC--CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 467888899999999999999 5668999999999864322 23345678999999999999999999999877 689
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
|+|+|||+. +|.-++.... -.+++.++..+++|++.||+|||++ ||+|||||.+|||++.+|.+||+|||+|++
T Consensus 194 YlVFeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~ 267 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARF 267 (560)
T ss_pred EEEEecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceee
Confidence 999999988 8988886543 4689999999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCc-cccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccc------------cccccc
Q 039322 592 LKPESSN-WTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS------------SLNTDI 657 (708)
Q Consensus 592 ~~~~~~~-~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~------------~~~~~~ 657 (708)
+...... ++..+.|.+|.|||++.+. .|+.++|+||.|||+.||++|+..|......+.. .+....
T Consensus 268 y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~ 347 (560)
T KOG0600|consen 268 YTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS 347 (560)
T ss_pred ccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence 8776544 7888999999999988764 5999999999999999999999998743211100 000000
Q ss_pred ccc--cccCCCCCCCC---chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 658 ALD--EILDPRLPPPS---RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 658 ~~~--~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.+. ..+.+..+... +.....+....+|+..++..||.+|.||.+++++
T Consensus 348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 000 11111111000 0011112345688889999999999999999864
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-42 Score=336.34 Aligned_cols=256 Identities=27% Similarity=0.386 Sum_probs=209.0
Q ss_pred hccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|+...+||.|..++||+| ..+.++.||||++.-+ .. ..+.+.+.+|+..|+.++||||++++..|..+...|+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLE--kc-~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLE--KC-NNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehh--hh-hhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence 378999999999999999999 5567899999999752 11 2236889999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||.||.+|++.+.++..-.. .+.+..+..|++++.+||.|||.+ |.||||||+.|||++.+|.|||+|||.+..+.
T Consensus 102 VmpfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred eehhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 99999999999999876543 389999999999999999999999 99999999999999999999999999877654
Q ss_pred CCCCcc----ccccccccccCcccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 594 PESSNW----TEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 594 ~~~~~~----~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
..+... ...+|++.|||||++.. ..|+.|+|||||||...||.+|..||..+.... .+-.-+....
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk--------vLl~tLqn~p 249 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK--------VLLLTLQNDP 249 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH--------HHHHHhcCCC
Confidence 443322 45689999999998543 468999999999999999999999998544321 1111111111
Q ss_pred C------CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 668 P------PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 668 ~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
+ .+..........+.+++..|+.+||++|||+++++++
T Consensus 250 p~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 250 PTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1 0111122233478999999999999999999999876
No 21
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=349.32 Aligned_cols=241 Identities=28% Similarity=0.492 Sum_probs=200.9
Q ss_pred cccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEec
Q 039322 439 DAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELL 518 (708)
Q Consensus 439 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~ 518 (708)
...+.+|.|+.|.||.|+.. ++.||||+++.- .+ .+++-|++|+|+||+.+.|+|.....+|||||||
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~el------kE-----TdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVREL------KE-----TDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhhh------hh-----hhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence 44567999999999999985 788999997631 11 3677799999999999999999999999999999
Q ss_pred cCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 039322 519 ERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598 (708)
Q Consensus 519 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 598 (708)
..|-|+..|+..+ .++......|..+||.|+.|||.+ .|||||||.-|||++.+..|||+|||-++....- ..
T Consensus 195 a~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-ST 267 (904)
T KOG4721|consen 195 AQGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-ST 267 (904)
T ss_pred ccccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-hh
Confidence 9999999997654 478899999999999999999999 9999999999999999999999999999865433 45
Q ss_pred cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHH
Q 039322 599 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKL 678 (708)
Q Consensus 599 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (708)
...++||+.|||||++...+.+.|+|||||||+||||+||..||..........-.....+ .++.+. .++
T Consensus 268 kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL------~LpvPs----tcP 337 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSL------HLPVPS----TCP 337 (904)
T ss_pred hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcc------cccCcc----cCc
Confidence 5678999999999999999999999999999999999999999975443221111111111 122221 223
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 679 ISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 679 ~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
..|.-|++.||+-.|..||+|++++.||.|
T Consensus 338 ~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 338 DGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred hHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 357888999999999999999999999976
No 22
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=350.27 Aligned_cols=257 Identities=22% Similarity=0.325 Sum_probs=212.6
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchh-HhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCe
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQI-ADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARH 510 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~ 510 (708)
..+.|.+.+.||+|.||+|+.|.+ .+++.||+|++.+....... ...+.+.+|+.++++++ ||||+++++++..+..
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 347899999999999999999954 57899999987663221111 23456678999999999 9999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEeecccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVADFGIA 589 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~a 589 (708)
.++||||+.||+|.+++... .++.+....++++|++.|++|||++ ||+||||||+||+++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~---g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNK---GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999763 3488899999999999999999999 99999999999999999 99999999999
Q ss_pred cccCCCCCccccccccccccCccccccCC-CC-cchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYTMK-IT-EKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~-~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
......+.......|++.|+|||++.+.. |+ .++||||+|+++|.|++|+.||+... .......+....+
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~--------~~~l~~ki~~~~~ 240 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN--------VPNLYRKIRKGEF 240 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc--------HHHHHHHHhcCCc
Confidence 97743445567789999999999999877 76 68999999999999999999998521 1222233444444
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.... ..+...++.+|+..||.+|+|+.+++++=|
T Consensus 241 ~~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w 277 (370)
T KOG0583|consen 241 KIPSYLL---SPEARSLIEKMLVPDPSTRITLLEILEHPW 277 (370)
T ss_pred cCCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHhhChh
Confidence 4333221 345788999999999999999999997654
No 23
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-42 Score=339.25 Aligned_cols=253 Identities=27% Similarity=0.412 Sum_probs=200.5
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC--eeE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR--HSF 512 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~ 512 (708)
.+|...+.||+|+||+||.+... +|+..|||.+... +....+.+.+|+++|++++|||||+++|...... .++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~----~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE----DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecc----cchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 46778889999999999999654 4899999998753 1122667899999999999999999999854444 689
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEeecccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL-EYEAHVADFGIAKF 591 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~a~~ 591 (708)
+.|||+++|+|.+++...+. +++++.+..+++||++||+|||++ |||||||||+|||++. ++.+||+|||++..
T Consensus 93 i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 99999999999999987663 599999999999999999999999 9999999999999999 79999999999987
Q ss_pred cCCC---CCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcc-ccccccccccccccccccCCC
Q 039322 592 LKPE---SSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFL-SLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 592 ~~~~---~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 666 (708)
.... ........||+.|||||++..+ ....++||||+||++.||+||+.||... .. ....+.......
T Consensus 168 ~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~-------~~~~~~ig~~~~ 240 (313)
T KOG0198|consen 168 LESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE-------AEALLLIGREDS 240 (313)
T ss_pred cccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch-------HHHHHHHhccCC
Confidence 6531 1223457899999999999854 3445999999999999999999998742 10 011111111111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.-+.. .+....+++.+|+..||++||||+++++|..
T Consensus 241 ~P~ip~~---ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 241 LPEIPDS---LSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred CCCCCcc---cCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 1111112 2234667888999999999999999999853
No 24
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-41 Score=330.17 Aligned_cols=252 Identities=23% Similarity=0.357 Sum_probs=215.3
Q ss_pred ccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|++.+.||+|.||.|-+| .+..|+.||||.++++.. .+..+.-.+.+|+++|+.++||||+.++++|+..+...+|
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkI-kdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKI-KDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhc-ccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 68899999999999999999 457899999999988533 3345566789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||..+|.|+||+..++ .+++.+.+.+++||+.|+.|+|++ +++|||||.+|||+|.++++||+|||++-.+..
T Consensus 132 MEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999999998765 489999999999999999999999 999999999999999999999999999987763
Q ss_pred CCCccccccccccccCccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKIT-EKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
....+.++|++-|.+||.+.+.+|. +.+|-||+|+++|-|+.|..||+... ....++.+-.+....+...
T Consensus 206 -~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D--------hk~lvrQIs~GaYrEP~~P 276 (668)
T KOG0611|consen 206 -KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD--------HKRLVRQISRGAYREPETP 276 (668)
T ss_pred -ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch--------HHHHHHHhhcccccCCCCC
Confidence 3456788999999999999988874 68999999999999999999998432 2333344444443333221
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
....-||++|+..+|++|.|..+|..|-|+
T Consensus 277 -----SdA~gLIRwmLmVNP~RRATieDiAsHWWv 306 (668)
T KOG0611|consen 277 -----SDASGLIRWMLMVNPERRATIEDIASHWWV 306 (668)
T ss_pred -----chHHHHHHHHHhcCcccchhHHHHhhhhee
Confidence 124568889999999999999999998764
No 25
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.3e-42 Score=310.83 Aligned_cols=255 Identities=27% Similarity=0.383 Sum_probs=216.0
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++++.||+|.||.||.|+. +++-.||+|++.+.. .....-..++.+|+++-+.|+||||+++|++|.+....|+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq-i~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ-ILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHH-HHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 37899999999999999999954 467789999987632 1122235689999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
++||...|.+...|..... .++++...+.+..|+|.|+.|+|.+ +|+||||||+|+|++..+..|++|||.+....
T Consensus 100 ilEya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEEecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 9999999999999975543 4588899999999999999999999 99999999999999999999999999996432
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.......+||..|.|||+..+...+..+|+|++|++.||++.|..||+... ..+..+++..-++..+.
T Consensus 176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--------~~etYkrI~k~~~~~p~-- 243 (281)
T KOG0580|consen 176 --SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--------HSETYKRIRKVDLKFPS-- 243 (281)
T ss_pred --CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--------hHHHHHHHHHccccCCc--
Confidence 456677899999999999999999999999999999999999999998422 34444444444443332
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.......++|.+|+.++|.+|.+..|+++|-+|
T Consensus 244 --~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 244 --TISGGAADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred --ccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence 223347789999999999999999999999876
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.8e-42 Score=345.12 Aligned_cols=249 Identities=28% Similarity=0.389 Sum_probs=213.6
Q ss_pred ccccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|-+.+.||+|.||.||+|+ ..+.+.||+|.+.+.. ...++.+.+.+|++++++++||||+.++++|+...+.|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g--r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG--RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcC--CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 577888899999999999995 4568899999998743 2335677899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+.| +|..++...+ .++++.+..++.+++.||.|||+. +|.|||+||+||+++.++.+|+||||+|+.+..
T Consensus 80 te~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred ehhhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 999988 9999997654 489999999999999999999999 999999999999999999999999999998887
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.....+...||+-|||||+..+..|+..+|.||+||++||+++|++||-..+. ....+.+......++.
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si--------~~Lv~~I~~d~v~~p~--- 221 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI--------TQLVKSILKDPVKPPS--- 221 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH--------HHHHHHHhcCCCCCcc---
Confidence 77777888999999999999999999999999999999999999999863221 1122233333333322
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.....+..++...+.+||.+|.|-.+++.|
T Consensus 222 -~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 222 -TASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred -cccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 344568888899999999999999998876
No 27
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-41 Score=314.11 Aligned_cols=239 Identities=25% Similarity=0.334 Sum_probs=207.4
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|+..+.||.|+||.|..++.+ +|..+|+|++.+.. .....+.+....|..+++.+.||+++++++.|.+.+..|+|
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-VVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHH-HHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 68899999999999999999665 58899999998732 22234556778899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||++||-|..++++.+ +++++..+.+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||+|..+..
T Consensus 123 meyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EeccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999997654 489999999999999999999999 999999999999999999999999999997753
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
. ..+.+||+.|+|||.+....+..++|.|||||++|||+.|..||... ......+.+...++..++...
T Consensus 197 r---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~--------~~~~iY~KI~~~~v~fP~~fs 265 (355)
T KOG0616|consen 197 R---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD--------NPIQIYEKILEGKVKFPSYFS 265 (355)
T ss_pred c---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC--------ChHHHHHHHHhCcccCCcccC
Confidence 2 45678999999999999999999999999999999999999998732 235556677777776665444
Q ss_pred HHHHHHHHHHHHhccCCCCCCC
Q 039322 675 QEKLISIMEVAFSCLNESPESR 696 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~R 696 (708)
. ++.+|++..++.|-.+|
T Consensus 266 ~----~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 266 S----DAKDLLKKLLQVDLTKR 283 (355)
T ss_pred H----HHHHHHHHHHhhhhHhh
Confidence 3 37788889999998888
No 28
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=350.83 Aligned_cols=348 Identities=23% Similarity=0.221 Sum_probs=272.7
Q ss_pred cEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-------------------------CCcccccccCC
Q 039322 5 SILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-------------------------PMLTRPGLDFN 59 (708)
Q Consensus 5 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-------------------------~~l~~l~l~~n 59 (708)
++||+++|++.++.+..|.++++|+++++..|.+. .+|...+. |.|+.||||.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 56888888888888888888888888888888876 44444333 34455555555
Q ss_pred CccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCC
Q 039322 60 HFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISS 139 (708)
Q Consensus 60 ~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 139 (708)
.|+.....+|..-.++++|+|++|.|+.....+|.++.+|.+|.|++|+|+.++...|.++++|+.|+|..|+|..+...
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~l 239 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGL 239 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhh
Confidence 55554445555555666666666666666666666666677777777777766666677777777777777777655566
Q ss_pred CCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCC
Q 039322 140 NWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDL 219 (708)
Q Consensus 140 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 219 (708)
.|.++++|+.|.|..|.|......+|..+.++++|+|+.|++......++.+++.|+.|+|++|.|..+.++.+...++|
T Consensus 240 tFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL 319 (873)
T KOG4194|consen 240 TFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKL 319 (873)
T ss_pred hhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccc
Confidence 67777777777777777777777788888888888888888887777788889999999999999988888888888999
Q ss_pred CeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCC---CchhhcCcccCCceec
Q 039322 220 EYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGE---IPFQICSLKSLEKLNL 296 (708)
Q Consensus 220 ~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~---~~~~~~~~~~L~~L~l 296 (708)
++|+|++|+|+...+..|..+..|+.|+|++|+|+.+....|.++.+|++|||++|.|+.. ....|..+++|+.|.|
T Consensus 320 ~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l 399 (873)
T KOG4194|consen 320 KELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRL 399 (873)
T ss_pred eeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheee
Confidence 9999999999988888899999999999999999877778899999999999999988753 3456778999999999
Q ss_pred ccccccCCCCCcccccccccEEecCCCcCCCCCCCccccccCcccccccccCcCCCC
Q 039322 297 SHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 297 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 353 (708)
.||+|..+...+|.++++|++|||.+|.+...-|+...-..++.+.+......|||.
T Consensus 400 ~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 400 TGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQ 456 (873)
T ss_pred cCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEecc
Confidence 999999888889999999999999999999877765444477888888888999984
No 29
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=368.23 Aligned_cols=253 Identities=27% Similarity=0.451 Sum_probs=208.6
Q ss_pred ccccccceeccccCccEEEEEeC--CCc----EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP--SGQ----VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
......+.||+|+||.||.|... +|. .||||.+++. ....+..+|.+|..+|++++|||||+++|++.+..
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~---~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL---SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc---CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 45667788999999999999654 343 4999998864 23467889999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhccccc----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 510 HSFLVYELLERGSLAAILSSDTA----AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
..++++|||++|+|..||++.+. ...++..+.+.++.|||+|+.||+++ ++|||||.++|+|++....|||+|
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcc
Confidence 99999999999999999987632 34589999999999999999999999 899999999999999999999999
Q ss_pred cccccccCCCCCcccc-c-cccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccc-c
Q 039322 586 FGIAKFLKPESSNWTE-F-AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALD-E 661 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~-~-~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~-~ 661 (708)
||+|+.....+++... . .-...|||||.+..+.++.|+|||||||++||++| |..||.... ..+.+. .
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~--------n~~v~~~~ 917 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS--------NFEVLLDV 917 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc--------hHHHHHHH
Confidence 9999954433333222 1 23579999999999999999999999999999998 999987322 222233 4
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
...+++.++.. +++ .+++++..||+.+|++||++..+++.+
T Consensus 918 ~~ggRL~~P~~-CP~---~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 918 LEGGRLDPPSY-CPE---KLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred HhCCccCCCCC-CCh---HHHHHHHHHccCChhhCccHHHHHhhh
Confidence 44455555543 333 477889999999999999999999865
No 30
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-42 Score=335.83 Aligned_cols=250 Identities=26% Similarity=0.418 Sum_probs=211.2
Q ss_pred ccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
..|.....||+|.||.||+| ....++.||+|++..... ..+.+.+.+|+.++.+++++||.++||.+..+..++++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~---~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA---EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhc---chhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHH
Confidence 45777789999999999999 456789999999986432 23456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||||.||++.+.++.... +.+..+.-+++++..|+.|||++ +.+|||||+.||++..+|.+|++|||.+.....
T Consensus 90 Mey~~gGsv~~lL~~~~~---~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNI---LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred HHHhcCcchhhhhccCCC---CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeec
Confidence 999999999999976542 47788888999999999999999 999999999999999999999999999998877
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
........+||+.|||||++....|+.|+||||||++++||.+|.+|+..... ...--.+....+|...
T Consensus 164 ~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP---------mrvlflIpk~~PP~L~-- 232 (467)
T KOG0201|consen 164 TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP---------MRVLFLIPKSAPPRLD-- 232 (467)
T ss_pred hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc---------ceEEEeccCCCCCccc--
Confidence 76666889999999999999988999999999999999999999999874322 1111122222222211
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
......+.+++..|+++||+.||+|.++++|
T Consensus 233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 233 GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 1445568899999999999999999999987
No 31
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-41 Score=347.27 Aligned_cols=255 Identities=27% Similarity=0.399 Sum_probs=203.9
Q ss_pred ccccccceeccccCccEEEEEeCC--C--cE-EEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS--G--QV-VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~--~--~~-vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
++....++||+|+||.||+|.+.. + .. ||||..+... ........+|++|+++|++++|||||++||++..+.+
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~-~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS-ELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccc-cccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 455666899999999999996542 2 23 8999987521 1234567899999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++|||+|.||+|.++|++... .++..++..++.+.|.||+|||++ +++||||.++|+|++.++.+||+|||+++
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccccc
Confidence 9999999999999999987653 589999999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccc-cCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEI-LDPRLP 668 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 668 (708)
.............-+.+|+|||.+..+.++.++|||||||++||+++ |..||...... .....+ .+....
T Consensus 311 ~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--------~v~~kI~~~~~r~ 382 (474)
T KOG0194|consen 311 AGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--------EVKAKIVKNGYRM 382 (474)
T ss_pred CCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--------HHHHHHHhcCccC
Confidence 54311111112235689999999999999999999999999999998 88898754321 222222 222222
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+...+ ..+..++.+||..+|++||+|.++.+.++
T Consensus 383 ~~~~~~p---~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 383 PIPSKTP---KELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CCCCCCH---HHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 2222222 34667777999999999999999998875
No 32
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.9e-40 Score=346.00 Aligned_cols=257 Identities=22% Similarity=0.384 Sum_probs=201.0
Q ss_pred hccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSH 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~ 507 (708)
.++|++.+.||+|+||.||+|.. .+++.||||+++... .......+.+|+++++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA---TASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc---chHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 46899999999999999999963 235689999987532 223456789999999999 89999999999876
Q ss_pred CC-eeEEEEEeccCCCHHHHhccccc------------------------------------------------------
Q 039322 508 AR-HSFLVYELLERGSLAAILSSDTA------------------------------------------------------ 532 (708)
Q Consensus 508 ~~-~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------ 532 (708)
++ ..++||||+++|+|.+++.....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 54 68899999999999999965321
Q ss_pred -----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc--ccccccc
Q 039322 533 -----AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGT 605 (708)
Q Consensus 533 -----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~ 605 (708)
...+++..+..++.|+++||+|||++ ||+||||||+||+++.++.+||+|||+++........ .....++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 13478889999999999999999999 9999999999999999999999999999865432221 1223456
Q ss_pred ccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHH
Q 039322 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEV 684 (708)
Q Consensus 606 ~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 684 (708)
..|+|||++.+..++.++||||||+++|||++ |..||...... ........++.....+. ..+..+.++
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~---~~~~~l~~l 309 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-------EEFCQRLKDGTRMRAPE---NATPEIYRI 309 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-------HHHHHHHhcCCCCCCCC---CCCHHHHHH
Confidence 78999999998889999999999999999997 99998743211 01111111111111111 123358899
Q ss_pred HHhccCCCCCCCCCHHHHHHHhh
Q 039322 685 AFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 685 i~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+||+.||++|||+.|+++.|+
T Consensus 310 i~~cl~~dp~~RPs~~el~~~l~ 332 (338)
T cd05102 310 MLACWQGDPKERPTFSALVEILG 332 (338)
T ss_pred HHHHccCChhhCcCHHHHHHHHH
Confidence 99999999999999999999875
No 33
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=330.01 Aligned_cols=260 Identities=23% Similarity=0.305 Sum_probs=209.2
Q ss_pred HHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCc----------chhHhHHHHHHHHHHHHhccCCceeeE
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPC----------DQIADQKEFLIEVKALTEIRHRNIVKF 501 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~----------~~~~~~~~~~~e~~~l~~l~h~~iv~l 501 (708)
+..++|++...||+|.||.|-+|+. .+++.||||++.+.... ......+...+|+.+|+++.|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 3458999999999999999999954 57999999999763111 011123578999999999999999999
Q ss_pred EEEEeeC--CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC
Q 039322 502 YGFCSHA--RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY 579 (708)
Q Consensus 502 ~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 579 (708)
+++..++ +..|||+|||..|.+... ...+..+++.+.++++++++.||+|||.+ ||+||||||+|+|++++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 9999875 579999999998877542 22223389999999999999999999999 999999999999999999
Q ss_pred cEEEeecccccccCCC-----CCccccccccccccCccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCccccccc
Q 039322 580 EAHVADFGIAKFLKPE-----SSNWTEFAGTYGYVAPELAYTMK----ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS 650 (708)
Q Consensus 580 ~~kl~Dfg~a~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslG~~l~elltg~~p~~~~~~~~~ 650 (708)
++||+|||.+...... +......+||+.|+|||++.++. .+.+.||||+||.+|.|+.|+.||-.
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~------ 321 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD------ 321 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc------
Confidence 9999999999866322 22234578999999999988743 34588999999999999999999852
Q ss_pred cccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 651 SSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.......+.+.+..+..+... +....+.+||++++.+||+.|.+..+|..|.|+
T Consensus 322 --~~~~~l~~KIvn~pL~fP~~p--e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 322 --DFELELFDKIVNDPLEFPENP--EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred --chHHHHHHHHhcCcccCCCcc--cccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 223445566666665554332 334568899999999999999999999988764
No 34
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7e-40 Score=390.89 Aligned_cols=353 Identities=37% Similarity=0.511 Sum_probs=316.1
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEe
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFG 79 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 79 (708)
|++|++|+|++|+++...|..++++++|++|+|++|.+.+.+|..+.. ++|+.|++++|.+.+..|..+..+++|++|+
T Consensus 211 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 290 (968)
T PLN00113 211 MKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLD 290 (968)
T ss_pred cCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEE
Confidence 578999999999999999999999999999999999999888888876 8999999999999999999999999999999
Q ss_pred ccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccc
Q 039322 80 VSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITG 159 (708)
Q Consensus 80 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 159 (708)
+++|.+++..|..+.++++|+.|++++|.+++..+..+..+++|++|++++|.+.+..+..+..+++|+.|++++|++++
T Consensus 291 Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~ 370 (968)
T PLN00113 291 LSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTG 370 (968)
T ss_pred CcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEe
Confidence 99999999999999999999999999999999999999999999999999999998889899999999999999999999
Q ss_pred cCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCc
Q 039322 160 GIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGN 239 (708)
Q Consensus 160 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~ 239 (708)
..|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..|..|..+++|+.|++++|.+++..+..+..
T Consensus 371 ~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 450 (968)
T PLN00113 371 EIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWD 450 (968)
T ss_pred eCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhcc
Confidence 99999999999999999999998888888888888888888888888777777777777777777777776655543333
Q ss_pred -----------------------cccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceec
Q 039322 240 -----------------------LLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNL 296 (708)
Q Consensus 240 -----------------------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l 296 (708)
.++|+.|++++|++++..|..|..+++|+.|+|++|.+.+..|..+..+++|+.|+|
T Consensus 451 l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 530 (968)
T PLN00113 451 MPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDL 530 (968)
T ss_pred CCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEEC
Confidence 345677777777887788888999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccEEecCCCcCCCCCCC-ccccccCcccccccccCcCCCC
Q 039322 297 SHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN-STAFRNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 297 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~ 353 (708)
++|.+++.+|..+..+++|+.|++++|++++..|. ...+..+..+.+++|+..+..|
T Consensus 531 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 531 SHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 99999999999999999999999999999987776 4556778999999999877544
No 35
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.1e-40 Score=334.60 Aligned_cols=255 Identities=23% Similarity=0.307 Sum_probs=205.8
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..++|+..++||+|+||.||.|+- .+|..+|+|++++... ....+.+.++.|-.+|....+|.||+++..|.+++.+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M-~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEM-LKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHH-HhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 357999999999999999999954 5799999999998432 22345667889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
|||||++||++..+|...+ .+++..+..++.+.+-|+..+|+. |+|||||||+|+|+|..|++||+|||++...
T Consensus 218 LiMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 9999999999999997554 489999999999999999999999 9999999999999999999999999998532
Q ss_pred CC-----------------------CCC-----c-------------------cccccccccccCccccccCCCCcchhH
Q 039322 593 KP-----------------------ESS-----N-------------------WTEFAGTYGYVAPELAYTMKITEKCDV 625 (708)
Q Consensus 593 ~~-----------------------~~~-----~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv 625 (708)
.. +.. . ....+|||.|+|||++.+..|+..+|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 10 000 0 013579999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC--CCCCCchhHHHHHHHHHHHHhccCCCCCCCC---CHH
Q 039322 626 YSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR--LPPPSRSVQEKLISIMEVAFSCLNESPESRP---TMK 700 (708)
Q Consensus 626 wslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~ 700 (708)
||+|||+|||+.|.+||.... .....+.++.-+ +..+.. .....+..+||.+|+. ||++|- .++
T Consensus 372 WSLG~ImyEmLvGyPPF~s~t--------p~~T~rkI~nwr~~l~fP~~--~~~s~eA~DLI~rll~-d~~~RLG~~G~~ 440 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSET--------PQETYRKIVNWRETLKFPEE--VDLSDEAKDLITRLLC-DPENRLGSKGAE 440 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHHhhhccCCCc--CcccHHHHHHHHHHhc-CHHHhcCcccHH
Confidence 999999999999999997432 233333333322 221111 1112456788999999 999998 477
Q ss_pred HHHHHh
Q 039322 701 VVTQQV 706 (708)
Q Consensus 701 evl~~l 706 (708)
||.+|-
T Consensus 441 EIK~HP 446 (550)
T KOG0605|consen 441 EIKKHP 446 (550)
T ss_pred HHhcCC
Confidence 777663
No 36
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-40 Score=342.83 Aligned_cols=253 Identities=24% Similarity=0.353 Sum_probs=213.7
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+-|+.++.||.|+-|.|-.|++ .+|+.+|||++.+.... .......+.+|+-+|+-+.|||++++|++++...++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~-s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL-SSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeecccccc-ccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 5688899999999999999965 57999999999874221 223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
.||+++|-|.+++-..+ ++++.+..++++||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|..- .
T Consensus 91 lEyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe-~ 163 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLE-V 163 (786)
T ss_pred EEecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecc-c
Confidence 99999999999997654 489999999999999999999999 9999999999999999999999999999754 4
Q ss_pred CCCccccccccccccCccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKIT-EKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
++......+|++.|.|||++.+.+|+ .++||||.|||+|.|+||+.||++. +....+..+..+.+.-+
T Consensus 164 ~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd--------Nir~LLlKV~~G~f~MP--- 232 (786)
T KOG0588|consen 164 PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD--------NIRVLLLKVQRGVFEMP--- 232 (786)
T ss_pred CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc--------cHHHHHHHHHcCcccCC---
Confidence 55566778999999999999999875 5899999999999999999999832 22333344444443322
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
...+.+..+|+.+|+..||++|.|++||.+|.++
T Consensus 233 -s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l 266 (786)
T KOG0588|consen 233 -SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFL 266 (786)
T ss_pred -CcCCHHHHHHHHHHhccCccccccHHHHhhCchh
Confidence 2223357788999999999999999999998764
No 37
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=333.78 Aligned_cols=260 Identities=23% Similarity=0.348 Sum_probs=207.9
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
....++++||+|.||.|.......+..||||+++.. +....+.+|.+|+++|.+++||||++++|+|..++.+++|+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~---a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPD---ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcc---cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 456788899999999999998877899999999874 23345789999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
|||++|+|.+|+..+.... ..-....+|+.|||.|++||.+. ++||||+.++|+|++.++++||+|||+++..-..
T Consensus 615 EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccC
Confidence 9999999999998875422 45566778999999999999999 9999999999999999999999999999955444
Q ss_pred CCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCcccccccccccccccccccc-CCCCCCC
Q 039322 596 SSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK--GKHPRDFLSLISSSSLNTDIALDEIL-DPRLPPP 670 (708)
Q Consensus 596 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 670 (708)
+++. ...+-+.+|||||.+..++++.++|||+||+.+||+++ ...||+....... -+...++. ++.....
T Consensus 691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-----ven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-----VENAGEFFRDQGRQVV 765 (807)
T ss_pred CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-----HHhhhhhcCCCCccee
Confidence 4332 22344689999999999999999999999999999985 7888864321100 00111111 1111111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..++..+.+++.+||..|-++||+++++..+|.
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 1222334556889999999999999999999988764
No 38
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-40 Score=325.46 Aligned_cols=258 Identities=26% Similarity=0.458 Sum_probs=200.5
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc--cCCceeeEEEEEeeCC----
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI--RHRNIVKFYGFCSHAR---- 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~~iv~l~~~~~~~~---- 509 (708)
......++||+|.||.||+|.+. ++.||||+|.. .+.+.|..|-++++.. +|+||++++++-....
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~-------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ 281 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE-------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM 281 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCH-------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence 44566778999999999999884 68999999874 5678899999987654 7999999999887665
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCC------CCeEEccCCCCCeeeCCCCcEEE
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF------PPIVHQDISSKNLLLDLEYEAHV 583 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~------~~ivH~dlk~~Nill~~~~~~kl 583 (708)
.++||+||.+.|+|.+||+.+. ++|....+++..+++||+|||+... |+|+|||||++|||+.+|+++.|
T Consensus 282 eywLVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccI 357 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCI 357 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEe
Confidence 7899999999999999998876 8999999999999999999998653 78999999999999999999999
Q ss_pred eecccccccCCCCCc--cccccccccccCccccccCC-CC-----cchhHHHHHHHHHHHHhCCCCCC------cccccc
Q 039322 584 ADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMK-IT-----EKCDVYSFGVLVLEAIKGKHPRD------FLSLIS 649 (708)
Q Consensus 584 ~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~-~~-----~~~DvwslG~~l~elltg~~p~~------~~~~~~ 649 (708)
+|||+|..+.+.... ....+||.+|||||++.+.- +. .+.||||+|.++|||++.-..++ +.-.+.
T Consensus 358 aDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe 437 (534)
T KOG3653|consen 358 ADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFE 437 (534)
T ss_pred eccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchh
Confidence 999999988765432 23468999999999987642 22 36899999999999998443321 111110
Q ss_pred -------ccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 650 -------SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 650 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
..+......+++...|.++...... ..+..+.+.+..||..||+.|.|+.-|-+++
T Consensus 438 ~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 438 AEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred HHhcCCCCHHHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 0000111122333334443332222 4456788999999999999999999888765
No 39
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-40 Score=336.76 Aligned_cols=254 Identities=22% Similarity=0.341 Sum_probs=216.7
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe-eE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH-SF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~-~~ 512 (708)
.++|...+++|+|+||.++..+++ +++.||+|.+...... ...+....+|+.++++++|||||.+.+.|.+++. .+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t--~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT--EPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccC--chhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence 367899999999999999998654 5778999998764322 2334578899999999999999999999999988 99
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
|||+||+||++.+.+.+.+ +..++++.+.+|+.|+..|+.|||++ .|+|||||+.|||++.++.|||+|||+|+..
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred EEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhc
Confidence 9999999999999998766 46689999999999999999999998 9999999999999999999999999999998
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.++.......+||+.|+.||.+.+.+|..|+|||||||++|||++-+++|..... .....++......+.+.
T Consensus 157 ~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--------~~Li~ki~~~~~~Plp~ 228 (426)
T KOG0589|consen 157 NPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--------SELILKINRGLYSPLPS 228 (426)
T ss_pred CCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--------HHHHHHHhhccCCCCCc
Confidence 8777677788999999999999999999999999999999999999999984322 22233333333333333
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
. +..++..+++.|+.++|+.||++.+++.+
T Consensus 229 ~---ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 229 M---YSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred c---ccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 2 34468889999999999999999999875
No 40
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=8.1e-40 Score=334.74 Aligned_cols=256 Identities=20% Similarity=0.245 Sum_probs=201.8
Q ss_pred ccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|+..+.||+|+||.||+|.. .+|+.||+|.+..... ........+.+|++++++++|++|+++++++.+++..++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-KKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhh-hhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 67788999999999999965 5789999999875321 112234567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG- 155 (285)
T ss_pred ecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-
Confidence 999999998885433 23488999999999999999999999 9999999999999999999999999999865432
Q ss_pred CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHH
Q 039322 597 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (708)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||........ .......+.......+ ..
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~----~~ 227 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK----REEVDRRVKEDQEEYS----EK 227 (285)
T ss_pred CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh----HHHHHHHhhcccccCC----cc
Confidence 223445789999999999999999999999999999999999999974321100 0001111111111111 11
Q ss_pred HHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 039322 677 KLISIMEVAFSCLNESPESRPT-----MKVVTQQVR 707 (708)
Q Consensus 677 ~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~ 707 (708)
....+.+++.+||+.||++||+ ++++++|-+
T Consensus 228 ~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~ 263 (285)
T cd05631 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPI 263 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHh
Confidence 2345788999999999999997 899988743
No 41
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7.3e-40 Score=341.02 Aligned_cols=246 Identities=22% Similarity=0.268 Sum_probs=199.1
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccC
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLER 520 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 520 (708)
+.||+|+||.||+|.. .+|+.||+|++++... ........+.+|++++++++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI-IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999965 4789999999875211 1123345678899999999999999999999999999999999999
Q ss_pred CCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 039322 521 GSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600 (708)
Q Consensus 521 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 600 (708)
|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 153 (323)
T cd05571 80 GELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence 99999986543 489999999999999999999999 999999999999999999999999999975433333344
Q ss_pred cccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHH
Q 039322 601 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS 680 (708)
Q Consensus 601 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (708)
...|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. ....+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~~~~~~~~~p~----~~~~~ 221 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEIRFPR----TLSPE 221 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--------HHHHHHHHcCCCCCCC----CCCHH
Confidence 56799999999999998899999999999999999999999863221 1111112222221111 12335
Q ss_pred HHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 039322 681 IMEVAFSCLNESPESRP-----TMKVVTQQV 706 (708)
Q Consensus 681 l~~li~~cl~~dP~~RP-----s~~evl~~l 706 (708)
+.+++.+||+.||++|| ++.++++|-
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~ 252 (323)
T cd05571 222 AKSLLAGLLKKDPKQRLGGGPEDAKEIMEHR 252 (323)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHHcCC
Confidence 78899999999999999 899998763
No 42
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-40 Score=339.32 Aligned_cols=246 Identities=25% Similarity=0.353 Sum_probs=208.2
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCee
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~ 511 (708)
..++|.+.++||+|.||+|++|..+ +++.+|||++++.... ...+.+..+.|.+++... +||.+++++.+|..+++.
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il-~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDIL-QRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeecccee-ccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 4578999999999999999999654 6889999999985433 235677889999998877 599999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
|.||||+.||++..+.+. +.+++..+.-+|..|+.||+|||++ ||||||||.+|||+|.+|++||+|||+++.
T Consensus 445 ~fvmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccc
Confidence 999999999995544433 4489999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
.--.+......+||+.|+|||++.+..|+.++|.|||||++|||+.|..||.. ...++..+.++......+.
T Consensus 518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g--------ddEee~FdsI~~d~~~yP~ 589 (694)
T KOG0694|consen 518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG--------DDEEEVFDSIVNDEVRYPR 589 (694)
T ss_pred cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC--------CCHHHHHHHHhcCCCCCCC
Confidence 55445566778999999999999999999999999999999999999999983 3345556666655544433
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCH
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTM 699 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~ 699 (708)
.. +.+...++++++.++|++|.-+
T Consensus 590 ~l----s~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 590 FL----SKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred cc----cHHHHHHHHHHhccCcccccCC
Confidence 22 2346678889999999999955
No 43
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=329.73 Aligned_cols=246 Identities=21% Similarity=0.297 Sum_probs=196.4
Q ss_pred ceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee----CCeeEEEEEe
Q 039322 442 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH----ARHSFLVYEL 517 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----~~~~~lv~e~ 517 (708)
..||+|++|.||+|.. +|+.||||+++.... ......+.+.+|++++++++||||++++|++.+ ....++||||
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHK-GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEecccccc-ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6799999999999988 689999999976322 222235678899999999999999999999977 3467899999
Q ss_pred ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 039322 518 LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 597 (708)
+++|+|.+++...+ .+++....+++.|++.|++|||+.. +++||||||+||+++.++.+||+|||++.......
T Consensus 104 ~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 104 CTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 99999999997643 4889999999999999999999842 78899999999999999999999999998654322
Q ss_pred ccccccccccccCcccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 598 NWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 598 ~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+......... ..
T Consensus 178 --~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--------~~~~~~i~~~~~~~~~--~~ 245 (283)
T PHA02988 178 --FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--------KEIYDLIINKNNSLKL--PL 245 (283)
T ss_pred --ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhcCCCCCC--CC
Confidence 23467889999999876 6789999999999999999999999974321 1111122111111110 01
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 246 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 246 DCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 12345889999999999999999999999875
No 44
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6.7e-40 Score=336.30 Aligned_cols=250 Identities=23% Similarity=0.294 Sum_probs=203.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+.+|++++++++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPE-VIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHH-HhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence 36888999999999999999654 68999999986421 11123456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 80 MEYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999996543 488999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
. .....|++.|+|||++.+..++.++|||||||++|+|++|+.||..... ......+.......+..
T Consensus 154 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~~~~~~~-- 220 (291)
T cd05612 154 R---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--------FGIYEKILAGKLEFPRH-- 220 (291)
T ss_pred C---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCcCCCcc--
Confidence 2 2235689999999999988899999999999999999999999874221 11122222222222111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPT-----MKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~ 707 (708)
....+.+++++||+.||.+||+ ++|+++|-+
T Consensus 221 --~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 256 (291)
T cd05612 221 --LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRW 256 (291)
T ss_pred --CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcc
Confidence 1235789999999999999995 999998855
No 45
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-39 Score=309.85 Aligned_cols=262 Identities=23% Similarity=0.261 Sum_probs=204.7
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--CeeE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHSF 512 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~~ 512 (708)
++|+..+.|++|+||.||+|+. ++++.||+|+++-...... -...-.+|+.++.+++|||||.+-++.... +..|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G--FPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG--FPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC--CcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 6788999999999999999955 5788999999986432221 133467899999999999999999988654 5799
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+|||||+. +|...+..-. +++...++..+..|+.+|++|||++ .|+|||||++|+|+.+.|.+||+|||+|+.+
T Consensus 154 ~VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhh
Confidence 99999988 9999987654 6789999999999999999999999 8999999999999999999999999999999
Q ss_pred CCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccc----------------cccc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS----------------SLNT 655 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~----------------~~~~ 655 (708)
+.+...++..+.|..|+|||.+.+. .|+.+.|+||+|||+.||+++++-|...+..... ++..
T Consensus 228 gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 228 GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 8877778888999999999988765 5899999999999999999999998754322111 1111
Q ss_pred ccccccccCCCCCCCC--chhHH--HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 656 DIALDEILDPRLPPPS--RSVQE--KLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 656 ~~~~~~~~~~~~~~~~--~~~~~--~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
......+..+..+... ..... -...-.+|+...+.+||++|-||+|.++|
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1111001011100000 00000 11234577789999999999999999876
No 46
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.1e-39 Score=332.32 Aligned_cols=262 Identities=21% Similarity=0.308 Sum_probs=199.2
Q ss_pred ccccccceeccccCccEEEEEeCC-----------------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCce
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS-----------------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i 498 (708)
++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... .......+.+|++++.+++||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA---NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC---CHHHHHHHHHHHHHHhhcCCCCe
Confidence 678999999999999999996532 3369999987532 22346679999999999999999
Q ss_pred eeEEEEEeeCCeeEEEEEeccCCCHHHHhcccc----------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 039322 499 VKFYGFCSHARHSFLVYELLERGSLAAILSSDT----------------AAQELGWSQRMNVIKGVADALSYLHHDCFPP 562 (708)
Q Consensus 499 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ 562 (708)
+++++++.+.+..++||||+++|+|.+++.... ....+++..+++++.|++.||+|||+. |
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ 158 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---N 158 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---C
Confidence 999999999999999999999999999985432 113468889999999999999999999 9
Q ss_pred eEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh--C
Q 039322 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK--G 638 (708)
Q Consensus 563 ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt--g 638 (708)
++||||||+||+++.++.+||+|||+++........ .....++..|+|||++.++.++.++||||||+++|||++ +
T Consensus 159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 999999999999999999999999999865433221 122345778999999988889999999999999999997 5
Q ss_pred CCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 639 KHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 639 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..||............ ............... ....+..+.+++.+||+.||++|||++||.+.|+
T Consensus 239 ~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 239 EQPYGELTDEQVIENA-GEFFRDQGRQVYLFR---PPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCCcCCHHHHHHHH-HHHhhhccccccccC---CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 5666532211000000 000000000000000 0112345889999999999999999999998875
No 47
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.9e-39 Score=334.93 Aligned_cols=261 Identities=24% Similarity=0.343 Sum_probs=204.9
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||++... +|..||+|.+.... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 68999999999999999999654 68889999987532 223456799999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 82 MEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred eecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999996543 4789999999999999999999862 699999999999999999999999999876532
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccc-------c----------
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD-------I---------- 657 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~-------~---------- 657 (708)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||.............. .
T Consensus 157 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred c--ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccc
Confidence 2 22345689999999999988899999999999999999999999964321100000000 0
Q ss_pred ---------------------ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 658 ---------------------ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 658 ---------------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
....+.....+. ........++.+++.+||++||++|||++|+++|-++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPK--LPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCcC--CCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 000000000000 0001123468899999999999999999999998653
No 48
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=339.10 Aligned_cols=250 Identities=24% Similarity=0.272 Sum_probs=204.0
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+.+|++++++++||||+++++++.+++..++|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE-ILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-HhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 68999999999999999999664 68899999987521 11123356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EcCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999997543 478899999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.. ....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+..
T Consensus 171 ~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------~~~~~~i~~~~~~~p~~-- 237 (329)
T PTZ00263 171 RT---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--------FRIYEKILAGRLKFPNW-- 237 (329)
T ss_pred Cc---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--------HHHHHHHhcCCcCCCCC--
Confidence 22 235789999999999998899999999999999999999999864221 11122222222222211
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPT-----MKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~ 707 (708)
....+.+++.+||+.||++||+ ++++++|-+
T Consensus 238 --~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~ 273 (329)
T PTZ00263 238 --FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPY 273 (329)
T ss_pred --CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCc
Confidence 1234778999999999999997 788887743
No 49
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-40 Score=298.29 Aligned_cols=259 Identities=23% Similarity=0.337 Sum_probs=208.2
Q ss_pred hccccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR---- 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~---- 509 (708)
.++|++.+.+|+|||+-||.++ ..+++.||+|++.-. ..++.+..++|++..++++|||+++++++...+.
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~----~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH----SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeecc----chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 4789999999999999999995 567889999998753 3466788999999999999999999999875433
Q ss_pred -eeEEEEEeccCCCHHHHhccccccc-CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 510 -HSFLVYELLERGSLAAILSSDTAAQ-ELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 510 -~~~lv~e~~~~g~L~~~l~~~~~~~-~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
..|++++|...|+|.+.+.....++ .+++.++++|+.+|++||.+||+.. |+++||||||.||++.+++.+++.|||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEecc
Confidence 4899999999999999998765444 6899999999999999999999983 249999999999999999999999999
Q ss_pred cccccCCCCC---------ccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccc
Q 039322 588 IAKFLKPESS---------NWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT 655 (708)
Q Consensus 588 ~a~~~~~~~~---------~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~ 655 (708)
.++...-.-. .......|..|+|||.+. +...++++|||||||++|+|+.|..||+..-. ..
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~------~G 248 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ------QG 248 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh------cC
Confidence 9875431111 123345789999999875 34578899999999999999999999984321 11
Q ss_pred ccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 656 DIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
....-++..+.+..+.... .+..+.++|++|++.||.+||++.+++.++
T Consensus 249 gSlaLAv~n~q~s~P~~~~--yse~l~~lik~mlqvdP~qRP~i~~ll~~~ 297 (302)
T KOG2345|consen 249 GSLALAVQNAQISIPNSSR--YSEALHQLIKSMLQVDPNQRPTIPELLSKL 297 (302)
T ss_pred CeEEEeeeccccccCCCCC--ccHHHHHHHHHHhcCCcccCCCHHHHHHHH
Confidence 2222233333433332222 455789999999999999999999999876
No 50
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-41 Score=340.90 Aligned_cols=344 Identities=23% Similarity=0.220 Sum_probs=272.1
Q ss_pred cEEECCCCcccccCCccccCCCC--CCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEecc
Q 039322 5 SILDLNQNQFKGVLPPSVSNLTN--LKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVS 81 (708)
Q Consensus 5 ~~L~l~~n~i~~~~~~~~~~l~~--L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~ 81 (708)
..||++++.+..++...+.++-- -++|+|++|+++.+.+..|.+ ++|+++.+.+|.++. +|.......+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~-IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTR-IPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhh-cccccccccceeEEeee
Confidence 46899999999887777766544 455999999999877776655 999999999999988 78888888899999999
Q ss_pred CCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccC
Q 039322 82 ENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGI 161 (708)
Q Consensus 82 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 161 (708)
+|.|+.+-...++-++.|++|||+.|.|+.+....|..-.++++|+|++|.|+.+..+.|..+.+|..|.|+.|+|+...
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 99999888888999999999999999999999999988889999999999999999999999999999999999999888
Q ss_pred CccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccc
Q 039322 162 PREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLL 241 (708)
Q Consensus 162 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~ 241 (708)
+..|..++.|+.|+|.+|+|+-...-.|.++++|+.|.|..|.+.......|..+.++++|+|..|+++..-..++.+++
T Consensus 214 ~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt 293 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLT 293 (873)
T ss_pred HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccc
Confidence 88899899999999999999844355677788888888887777766666777777777777777777766666677777
Q ss_pred cceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecC
Q 039322 242 KLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDIS 321 (708)
Q Consensus 242 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 321 (708)
+|+.|+||+|.|..+.++.++...+|++|+|++|.|+...+..|..+..|+.|+|++|+++.+-..+|.++.+|+.|||+
T Consensus 294 ~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr 373 (873)
T KOG4194|consen 294 SLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLR 373 (873)
T ss_pred hhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCc
Confidence 77777777777776667777767777777777777776666677777777777777777776666667777777777777
Q ss_pred CCcCCCCCCCc----cccccCcccccccccCc
Q 039322 322 DNQLQGPVPNS----TAFRNAPVEALKGNKGL 349 (708)
Q Consensus 322 ~N~l~~~~~~~----~~~~~~~~~~~~~n~~~ 349 (708)
+|.+...+.+. ..++.++.+.+.||+..
T Consensus 374 ~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk 405 (873)
T KOG4194|consen 374 SNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK 405 (873)
T ss_pred CCeEEEEEecchhhhccchhhhheeecCceee
Confidence 77666554442 12344555566666543
No 51
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.6e-39 Score=335.60 Aligned_cols=246 Identities=22% Similarity=0.268 Sum_probs=198.2
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccC
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLER 520 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 520 (708)
+.||+|+||.||++.. .+|+.||+|+++.... ........+..|++++++++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 3689999999999965 4689999999875321 1123345678899999999999999999999999999999999999
Q ss_pred CCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 039322 521 GSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600 (708)
Q Consensus 521 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 600 (708)
|+|.+++.... .+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++...........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 153 (323)
T cd05595 80 GELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence 99999886543 488999999999999999999999 999999999999999999999999999875433333334
Q ss_pred cccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHH
Q 039322 601 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS 680 (708)
Q Consensus 601 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (708)
...|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.. ....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--------~~~~~~~~~~~~~~p~~----~~~~ 221 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEEIRFPRT----LSPE 221 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCCCCCCCC----CCHH
Confidence 56789999999999988899999999999999999999999863221 11111222222211111 2235
Q ss_pred HHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 039322 681 IMEVAFSCLNESPESRP-----TMKVVTQQV 706 (708)
Q Consensus 681 l~~li~~cl~~dP~~RP-----s~~evl~~l 706 (708)
+.+++.+||++||++|| ++.++++|-
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~ 252 (323)
T cd05595 222 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 252 (323)
T ss_pred HHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence 78899999999999998 899998764
No 52
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-41 Score=304.68 Aligned_cols=257 Identities=23% Similarity=0.348 Sum_probs=216.8
Q ss_pred hccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.+.|++...||+|.|+.||+. ..++|+.+|+|.+....- .....+++.+|+++-+.++||||+++.+.+......|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~--~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl 87 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 87 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhh--ccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence 467888889999999999999 456799999998864322 22367889999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---CCcEEEeeccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL---EYEAHVADFGIAK 590 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~a~ 590 (708)
|+|+|.|++|..-+-.+ .-.++..+-...+||.+|++|+|.+ +|||||+||+|+++.+ ..-+||+|||+|.
T Consensus 88 vFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred EEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEE
Confidence 99999999997766433 2367788889999999999999999 9999999999999954 3458999999999
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
... +.......+|||+|||||++...+++..+|||+-|+++|-|+.|..||+... .....+.++.+....+
T Consensus 162 ~l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--------~~rlye~I~~g~yd~~ 232 (355)
T KOG0033|consen 162 EVN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYEQIKAGAYDYP 232 (355)
T ss_pred EeC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--------HHHHHHHHhccccCCC
Confidence 887 6666777899999999999999999999999999999999999999998422 2334455555555555
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
+..+.....+-.+|+++|+..||++|.|+.|.++|-||
T Consensus 233 ~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi 270 (355)
T KOG0033|consen 233 SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWI 270 (355)
T ss_pred CcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchh
Confidence 55566666678899999999999999999999999876
No 53
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.3e-39 Score=335.60 Aligned_cols=247 Identities=22% Similarity=0.273 Sum_probs=199.2
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccC
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLER 520 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 520 (708)
+.||+|+||.||++.. .+|+.||+|++.+... ........+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI-IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 3689999999999965 4689999999875321 1223456788999999999999999999999999999999999999
Q ss_pred CCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 039322 521 GSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600 (708)
Q Consensus 521 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 600 (708)
|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...........
T Consensus 80 g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 153 (328)
T cd05593 80 GELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK 153 (328)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence 99999886543 489999999999999999999999 999999999999999999999999999875433333334
Q ss_pred cccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHH
Q 039322 601 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS 680 (708)
Q Consensus 601 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (708)
...|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.. ....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~--------~~~~~~~~~~~~~~p~~----~~~~ 221 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEDIKFPRT----LSAD 221 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH--------HHHHHHhccCCccCCCC----CCHH
Confidence 45789999999999988899999999999999999999999864221 11111111111111111 2235
Q ss_pred HHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 681 IMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 681 l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
+.+++.+||++||++|| ++.|+++|-+
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 253 (328)
T cd05593 222 AKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSF 253 (328)
T ss_pred HHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCC
Confidence 78899999999999997 8999998744
No 54
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.4e-38 Score=322.23 Aligned_cols=254 Identities=21% Similarity=0.326 Sum_probs=202.3
Q ss_pred hccccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.++|++.+.||+|+||.||+|.++ .+..||+|.++... .......+.+|+.++++++||||+++++++..++.
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 80 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC---SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNT 80 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCC
Confidence 367899999999999999999653 35689999988642 12335678999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++|+|.+++.... ..+++.+++.++.|++.|++|||++ +++||||||+||+++.++.++++|||.+.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~ 155 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQ 155 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccc
Confidence 999999999999999997543 3589999999999999999999999 99999999999999999999999999876
Q ss_pred ccCCCCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCC
Q 039322 591 FLKPESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 591 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
........ .....++..|+|||.+.+..++.++|||||||++||+++ |+.||...... ...+.+.+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~~~~ 227 (266)
T cd05064 156 EDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--------DVIKAVEDGFRL 227 (266)
T ss_pred cccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCCCC
Confidence 54322111 112234578999999998899999999999999999875 99998743221 111111121111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+. ..+..+.+++.+||+.+|++||+++|+.+.|+
T Consensus 228 ~~~~---~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~ 263 (266)
T cd05064 228 PAPR---NCPNLLHQLMLDCWQKERGERPRFSQIHSILS 263 (266)
T ss_pred CCCC---CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHH
Confidence 1111 23345888999999999999999999999874
No 55
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.7e-39 Score=335.74 Aligned_cols=247 Identities=23% Similarity=0.331 Sum_probs=199.1
Q ss_pred ceeccccCccEEEEEe----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEe
Q 039322 442 YCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
+.||+|+||.||++.. .+++.||+|+++.............+..|++++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999964 357899999987532111223345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 039322 518 LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 597 (708)
+++|+|.+++.... .+.+..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999986543 378889999999999999999999 999999999999999999999999999875443333
Q ss_pred ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHH
Q 039322 598 NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677 (708)
Q Consensus 598 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (708)
......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+.. .
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~--------~~~~~~~~~~~~~~~~~----~ 223 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR--------KKTIDKILKGKLNLPPY----L 223 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCC----C
Confidence 33445789999999999988899999999999999999999999974321 11222222332222211 1
Q ss_pred HHHHHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 039322 678 LISIMEVAFSCLNESPESRP-----TMKVVTQQV 706 (708)
Q Consensus 678 ~~~l~~li~~cl~~dP~~RP-----s~~evl~~l 706 (708)
...+.+++.+||++||++|| +++++++|-
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~ 257 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP 257 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence 23578999999999999999 899988764
No 56
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2e-39 Score=339.57 Aligned_cols=257 Identities=20% Similarity=0.274 Sum_probs=204.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +++.||+|++++... ........+..|++++..++||||+++++++..++..++|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL-FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence 36889999999999999999765 588999999875211 1123456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 80 MEYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999996543 478999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc-CCCCCCCCch
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEIL-DPRLPPPSRS 673 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 673 (708)
......|++.|+|||++.+..++.++||||+||++|||++|+.||............ ....... .+....+
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~--- 225 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENL--KYWKETLQRPVYDDP--- 225 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHH--HhccccccCCCCCcc---
Confidence 233457899999999999889999999999999999999999999743221100000 0000000 1111100
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......++.+++.+||..+|++||+++|+++|-+
T Consensus 226 ~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~ 259 (333)
T cd05600 226 RFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPF 259 (333)
T ss_pred ccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcc
Confidence 0122345788999999999999999999998754
No 57
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=7.9e-39 Score=339.07 Aligned_cols=259 Identities=22% Similarity=0.377 Sum_probs=201.9
Q ss_pred HHhccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC 505 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~ 505 (708)
-..++|++.+.||+|+||.||+|... ++..||+|+++... .....+.+.+|+++++.+ +|+||+++++++
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA---HTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC---CHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 34468999999999999999998632 34579999997532 223456788999999999 899999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhcccc------------------------------------------------------
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDT------------------------------------------------------ 531 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~------------------------------------------------------ 531 (708)
...+..++||||+++|+|.+++....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 99999999999999999999985421
Q ss_pred -------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 039322 532 -------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598 (708)
Q Consensus 532 -------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 598 (708)
....+++.++++++.|++.||+|||++ |++||||||+||+++.++.+||+|||+++........
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce
Confidence 112478899999999999999999999 9999999999999999999999999999865433221
Q ss_pred --cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 599 --WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 599 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ................. .
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~--------~~~~~~~~~~~~~~~~~--~ 338 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV--------NSKFYKMVKRGYQMSRP--D 338 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc--------cHHHHHHHHcccCccCC--C
Confidence 112234568999999988889999999999999999997 9999874221 00111111111110000 0
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.++.+++.+||+.||++|||+.+|++.|+
T Consensus 339 ~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~ 370 (374)
T cd05106 339 FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQ 370 (374)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11245889999999999999999999999875
No 58
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.5e-39 Score=333.50 Aligned_cols=244 Identities=22% Similarity=0.302 Sum_probs=196.6
Q ss_pred eccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCC
Q 039322 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGS 522 (708)
Q Consensus 444 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~ 522 (708)
||+|+||.||+|... +++.||+|++..... ........+.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI-VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 699999999999654 588999999864211 122345678889999999999999999999999999999999999999
Q ss_pred HHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 039322 523 LAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602 (708)
Q Consensus 523 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 602 (708)
|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.............
T Consensus 80 L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 153 (312)
T cd05585 80 LFHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTF 153 (312)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccc
Confidence 999996543 488999999999999999999999 99999999999999999999999999998644333334456
Q ss_pred cccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHH
Q 039322 603 AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIM 682 (708)
Q Consensus 603 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 682 (708)
.|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. .....+.
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~--------~~~~~~~~~~~~~~~~----~~~~~~~ 221 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV--------NEMYRKILQEPLRFPD----GFDRDAK 221 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH--------HHHHHHHHcCCCCCCC----cCCHHHH
Confidence 789999999999998899999999999999999999999864221 1111222222222111 1234578
Q ss_pred HHHHhccCCCCCCCC---CHHHHHHHh
Q 039322 683 EVAFSCLNESPESRP---TMKVVTQQV 706 (708)
Q Consensus 683 ~li~~cl~~dP~~RP---s~~evl~~l 706 (708)
+++.+||+.||++|| ++.|+++|-
T Consensus 222 ~li~~~L~~dp~~R~~~~~~~e~l~hp 248 (312)
T cd05585 222 DLLIGLLSRDPTRRLGYNGAQEIKNHP 248 (312)
T ss_pred HHHHHHcCCCHHHcCCCCCHHHHHcCC
Confidence 899999999999997 467777664
No 59
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.4e-39 Score=337.24 Aligned_cols=250 Identities=23% Similarity=0.273 Sum_probs=203.0
Q ss_pred ccccccceeccccCccEEEEEeCC--CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS--GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
++|.+.+.||+|+||.||+|.... +..||+|++..... ......+.+.+|+++++.++||||+++++++.+++..++
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI-IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 679999999999999999996533 36899999864211 112335678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. |++||||||+|||++.++.+||+|||++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999997543 488999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+..
T Consensus 183 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~p~~- 250 (340)
T PTZ00426 183 TR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP--------LLIYQKILEGIIYFPKF- 250 (340)
T ss_pred CC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH--------HHHHHHHhcCCCCCCCC-
Confidence 32 2345789999999999988899999999999999999999999974321 11122222222221111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
....+.+++++|++.||++|+ +++|+++|-+
T Consensus 251 ---~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~ 286 (340)
T PTZ00426 251 ---LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286 (340)
T ss_pred ---CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCC
Confidence 123467899999999999995 8999998754
No 60
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.1e-39 Score=328.32 Aligned_cols=263 Identities=19% Similarity=0.254 Sum_probs=201.3
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|.. .+++.||+|+++.... ......+.+|++++++++||||+++++++..++..++|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE---EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc---CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 6799999999999999999965 4688999999875321 12244677899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++ +|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 82 FEYLDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred EeCCCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 999975 9999886443 3478899999999999999999999 999999999999999999999999999976543
Q ss_pred CCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc----------------cccccc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS----------------SLNTDI 657 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~----------------~~~~~~ 657 (708)
.........+++.|+|||++.+ ..++.++||||+||++|||+||+.||......... ......
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 156 PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred CCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 3333344578899999998865 45889999999999999999999999643211000 000000
Q ss_pred ccccccCCCCCCCCc--hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPSR--SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+....... .......+..+++.+|++.||++|||++|+++|-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~ 287 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSY 287 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCC
Confidence 011111111100000 00111235779999999999999999999998854
No 61
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=330.20 Aligned_cols=257 Identities=26% Similarity=0.339 Sum_probs=223.3
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~ 512 (708)
...|++.+.||+|.||.||++..+ +|+.+|+|++.+..... ....+.+.+|+++|+++. |||||.+.++|++....+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~-~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG-KEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccc-cccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 367888899999999999999765 49999999998743322 224578999999999998 999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC----CcEEEeeccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE----YEAHVADFGI 588 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~ 588 (708)
+|||++.||.|.+.+... .+++.....++.|++.|++|||+. ||+|||+||+|+|+... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999765 289999999999999999999998 99999999999999654 4799999999
Q ss_pred ccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 589 AKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
|....+ .......+||+.|+|||++....++.++||||+|+++|.|++|..||.... .......+....+.
T Consensus 186 a~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~--------~~~~~~~i~~~~~~ 256 (382)
T KOG0032|consen 186 AKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET--------EFEIFLAILRGDFD 256 (382)
T ss_pred ceEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC--------hhHHHHHHHcCCCC
Confidence 998876 566778899999999999999999999999999999999999999998433 22333355566666
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.....+........++|+.|+..||.+|+|+.++++|-||
T Consensus 257 f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi 296 (382)
T KOG0032|consen 257 FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWI 296 (382)
T ss_pred CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccc
Confidence 6666677777788999999999999999999999999875
No 62
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.2e-38 Score=338.04 Aligned_cols=257 Identities=23% Similarity=0.368 Sum_probs=201.5
Q ss_pred hccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSH 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~ 507 (708)
.++|++.+.||+|+||.||+|.. .++..||||+++... .....+.+.+|+++++.+ +||||+++++++..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc---CcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 46799999999999999999953 235689999987532 223456788999999999 89999999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhccccc-------------------------------------------------------
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTA------------------------------------------------------- 532 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 532 (708)
++..++||||+++|+|.+++.....
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 9999999999999999999864321
Q ss_pred -----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 533 -----------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 533 -----------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
...+++..+.+++.||+.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 12478899999999999999999999 9999999999999999999999999999865433
Q ss_pred CCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 596 SSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 596 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.... ....++..|+|||++.+..++.++||||||+++|||++ |..||...... ....+.+.+......+.
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~ 340 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-------SKFYKMIKEGYRMLSPE 340 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-------HHHHHHHHhCccCCCCC
Confidence 2211 12334567999999999899999999999999999998 88898642210 00011111111111011
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.++.+++.+||+.||++|||+.||++.|+
T Consensus 341 ---~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~ 372 (375)
T cd05104 341 ---CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIE 372 (375)
T ss_pred ---CCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 11235889999999999999999999999886
No 63
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.5e-39 Score=337.78 Aligned_cols=251 Identities=24% Similarity=0.349 Sum_probs=196.2
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|+..+.||+|+||.||+|.. .+++.||||++.... .......+.+|+++++.++|+||+++++++..++..++|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence 5677888999999999999965 468999999986532 223456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+.. ...+..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 151 ~e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 151 LEFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred EecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 9999999986532 246678889999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCcccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
.........|+..|+|||++.. ...+.++|||||||++|||++|+.||........ ......+.......
T Consensus 221 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~ 295 (353)
T PLN00034 221 TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDW-----ASLMCAICMSQPPE 295 (353)
T ss_pred ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccH-----HHHHHHHhccCCCC
Confidence 3333345678999999998743 2234689999999999999999999873211000 00011111101111
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......++.+++.+||+.||++|||+.|+++|-+
T Consensus 296 ---~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~ 330 (353)
T PLN00034 296 ---APATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330 (353)
T ss_pred ---CCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 11122345889999999999999999999998854
No 64
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.7e-38 Score=318.48 Aligned_cols=250 Identities=24% Similarity=0.433 Sum_probs=201.9
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
++|++.+.||+|+||.||+|..+++..+|+|.+.... ...+.+..|++++++++||||+++++++..++..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 5688899999999999999988888899999976421 22456888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||.++.....
T Consensus 79 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05114 79 EFMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD 153 (256)
T ss_pred EcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence 9999999999986543 2478999999999999999999999 9999999999999999999999999998865432
Q ss_pred CCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 596 SSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 596 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
... .....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+........+..
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--------~~~~~~i~~~~~~~~~~~ 225 (256)
T cd05114 154 EYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--------YEVVEMISRGFRLYRPKL 225 (256)
T ss_pred ceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCCCCCCCC
Confidence 221 122234568999999988889999999999999999999 8999864321 111111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
....+.+++.+||+.+|++||+++|+++.|
T Consensus 226 ---~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 226 ---ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 123578999999999999999999999876
No 65
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.1e-38 Score=325.50 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=198.4
Q ss_pred eccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCC
Q 039322 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGS 522 (708)
Q Consensus 444 ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~ 522 (708)
||+|+||+||++.. .+++.||+|.+..... ......+.+..|++++++++|+||+++.+++..++..++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRL-KKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHH-hhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 69999999999965 4688999999865311 112234567889999999999999999999999999999999999999
Q ss_pred HHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 039322 523 LAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTE 601 (708)
Q Consensus 523 L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 601 (708)
|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++|+|||++............
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccc
Confidence 998875322 234589999999999999999999999 9999999999999999999999999999866544433444
Q ss_pred ccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHH
Q 039322 602 FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISI 681 (708)
Q Consensus 602 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 681 (708)
..|++.|+|||++.+..++.++||||+|+++|||++|+.||....... ................ ....+..+
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~ 228 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQRILNDSVTY----PDKFSPAS 228 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch----hHHHHHHhhcccCCCC----cccCCHHH
Confidence 578999999999999999999999999999999999999987432110 0011111111111111 11233457
Q ss_pred HHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 682 MEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 682 ~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
.+++.+||+.||++|| +++++++|-+
T Consensus 229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~ 259 (280)
T cd05608 229 KSFCEALLAKDPEKRLGFRDGNCDGLRTHPL 259 (280)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHhcChh
Confidence 8899999999999999 7888887643
No 66
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.3e-38 Score=323.02 Aligned_cols=255 Identities=25% Similarity=0.440 Sum_probs=204.6
Q ss_pred ccccccceeccccCccEEEEEeCC------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
++|++.+.||+|+||.||+|.... ...||+|.+.... .......+.+|++.+++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA---EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC---CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 578999999999999999996532 2579999987532 2234567899999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 039322 510 HSFLVYELLERGSLAAILSSDTA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 576 (708)
..+++|||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +++||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVG 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEc
Confidence 99999999999999999965421 13478899999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccc
Q 039322 577 LEYEAHVADFGIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSL 653 (708)
Q Consensus 577 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~ 653 (708)
+++.++|+|||++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~------ 232 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN------ 232 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH------
Confidence 999999999999976533221 1233456788999999988889999999999999999998 9999863221
Q ss_pred ccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+........+ ...+.++.+++.+||+.||++||+++||+++|+
T Consensus 233 --~~~~~~i~~~~~~~~~---~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 233 --QEVIEMIRSRQLLPCP---EDCPARVYALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred --HHHHHHHHcCCcCCCc---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHh
Confidence 1111122222221111 223456889999999999999999999999985
No 67
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=299.27 Aligned_cols=259 Identities=23% Similarity=0.356 Sum_probs=222.0
Q ss_pred HHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcch----hHhHHHHHHHHHHHHhc-cCCceeeEEEEEe
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQ----IADQKEFLIEVKALTEI-RHRNIVKFYGFCS 506 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~ 506 (708)
...+.|...+.+|.|..++|-+..+ ++|..+|+|++........ .+-.++-.+|+.+++++ .||+|+.+.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 3446788888999999999988844 4688999999865332222 22245677899999999 5999999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 507 HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
.+...++|+|.|+.|-|.|++... ..++++...+|++|+.+|++|||.. +||||||||+|||++++.++||+||
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~---VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSK---VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhh---eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 999999999999999999999654 4489999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccCcccccc------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYT------MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
|+|+...+ +......+||++|.|||.+.. ..|+..+|.||.|+++|.|+.|..||+.- .....++
T Consensus 168 GFa~~l~~-GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--------kQmlMLR 238 (411)
T KOG0599|consen 168 GFACQLEP-GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--------KQMLMLR 238 (411)
T ss_pred ceeeccCC-chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--------HHHHHHH
Confidence 99998864 456677899999999998753 35788999999999999999999999731 2234567
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 661 EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
-++.++....+..+.+......+||.+|++.||.+|.|++|+++|-
T Consensus 239 ~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 239 MIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred HHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 7788888888888888888999999999999999999999999874
No 68
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.7e-39 Score=324.11 Aligned_cols=249 Identities=33% Similarity=0.539 Sum_probs=193.0
Q ss_pred ccceeccccCccEEEEEeC-----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 440 AQYCIGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 440 ~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
..+.||.|.||.||+|.+. .+..|+||.++.. ......+.+.+|++.+++++||||++++|++...+..++|
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS---SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT---SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc---cccccceeeeeccccccccccccccccccccccccccccc
Confidence 4578999999999999765 3568999999652 2234578899999999999999999999999988889999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+++|+|.+++.... ...+++.++..|+.||++||+|||++ +++|+||+++||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EE--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTT
T ss_pred ccccccccccccccccc-cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 99999999999998762 24589999999999999999999999 999999999999999999999999999987632
Q ss_pred CCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 595 ESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 595 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
.... .........|+|||.+....++.++||||||+++||+++ |+.||..... ......+.+......+
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~ 227 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--------EEIIEKLKQGQRLPIP 227 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--------HHHHHHHHTTEETTSB
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccceec
Confidence 2221 233456789999999999889999999999999999999 7889764321 1112222222221111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.. .+..+.+++.+||+.||++|||++++++.|
T Consensus 228 ~~---~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 228 DN---CPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TT---SBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cc---hhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11 233477899999999999999999999876
No 69
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.7e-38 Score=320.93 Aligned_cols=256 Identities=28% Similarity=0.496 Sum_probs=209.2
Q ss_pred HHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
+...+|++.+.||+|+||.||+|...+++.+|+|.+... .......+..|+++++.++|+||+++++++...+..+
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 78 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSD----DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVY 78 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEecccc----chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeE
Confidence 445789999999999999999998878999999998763 2234567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++.... ...+++.++..++.|++.|++|||+. |++||||+|+||+++.++.+||+|||.+...
T Consensus 79 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~ 154 (261)
T cd05148 79 IITELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLI 154 (261)
T ss_pred EEEeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhc
Confidence 9999999999999997643 34589999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
...........++..|+|||...+..++.++||||||+++|+|++ |+.||..... ......+......+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~ 226 (261)
T cd05148 155 KEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--------HEVYDQITAGYRMPCP 226 (261)
T ss_pred CCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHHHHhCCcCCCC
Confidence 443333333445678999999988889999999999999999998 8999864321 1111112211111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||+.||++|||++++++.|+
T Consensus 227 ---~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 227 ---AKCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred ---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 122345789999999999999999999999885
No 70
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=310.96 Aligned_cols=255 Identities=22% Similarity=0.277 Sum_probs=213.4
Q ss_pred ccccccceeccccCccEEEEEeCC-CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
..|+..+.||+|.-|+||+++..+ +..+|+|++.+... .......+...|-+||+.+.||.++.+|+.|+.++..|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l-~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESL-ASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHH-hhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 678888999999999999997754 58999999987322 2234456788899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||||+||+|....+++. .+.+++..++.++..|+-||+|||-. |||+|||||+|||+.++|++.|+||.++.....
T Consensus 156 meyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999999887654 46699999999999999999999999 999999999999999999999999998753210
Q ss_pred ---------------------------------C-C----------------------CccccccccccccCccccccCC
Q 039322 595 ---------------------------------E-S----------------------SNWTEFAGTYGYVAPELAYTMK 618 (708)
Q Consensus 595 ---------------------------------~-~----------------------~~~~~~~~~~~y~aPE~~~~~~ 618 (708)
. . ......+||=.|.|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 0012356889999999999999
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC
Q 039322 619 ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPT 698 (708)
Q Consensus 619 ~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 698 (708)
.+.++|+|+|||++|||+.|..||.. ....+.+..++...+..+... ..+....+||++.+.+||++|..
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG--------~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKG--------SNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCC--------CCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhc
Confidence 99999999999999999999999973 334556666666555444332 44567889999999999999998
Q ss_pred ----HHHHHHH
Q 039322 699 ----MKVVTQQ 705 (708)
Q Consensus 699 ----~~evl~~ 705 (708)
+.||.+|
T Consensus 382 ~~rGA~eIK~H 392 (459)
T KOG0610|consen 382 SKRGAAEIKRH 392 (459)
T ss_pred cccchHHhhcC
Confidence 8888776
No 71
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.3e-38 Score=331.97 Aligned_cols=249 Identities=25% Similarity=0.329 Sum_probs=197.0
Q ss_pred ccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHH---HhccCCceeeEEEEEeeCCeeEE
Q 039322 438 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKAL---TEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l---~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
|++.+.||+|+||.||+|.. .+++.||||++++... ......+.+..|++++ +.++||||+++++++..++..|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDI-IARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 56788999999999999965 4689999999875211 1112344566666654 56679999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|..++.. ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++....
T Consensus 80 v~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 80 VMEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EEcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 9999999999988854 2489999999999999999999999 99999999999999999999999999987544
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+.......+..
T Consensus 153 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~--------~~~~~~i~~~~~~~p~~- 223 (324)
T cd05589 153 GFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE--------EEVFDSIVNDEVRYPRF- 223 (324)
T ss_pred CCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCCC-
Confidence 333334456789999999999988899999999999999999999999874321 11112222222211111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQV 706 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l 706 (708)
....+.+++.+||+.||++|| ++.+++++-
T Consensus 224 ---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 224 ---LSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred ---CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 123577899999999999999 678887764
No 72
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.4e-38 Score=307.55 Aligned_cols=265 Identities=23% Similarity=0.300 Sum_probs=205.3
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc-eeeEEEEEeeCC---
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN-IVKFYGFCSHAR--- 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~l~~~~~~~~--- 509 (708)
...|+..+.||+|+||+||+|+. .+|+.||+|+++-.... ........+|+.++++++|+| |+++++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc
Confidence 45677778899999999999954 57899999999864322 113456789999999999999 999999998877
Q ss_pred ---eeEEEEEeccCCCHHHHhcccccc-cCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 510 ---HSFLVYELLERGSLAAILSSDTAA-QELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 510 ---~~~lv~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
..++|+||++. +|.+++...... +.++...+..+.+|++.|++|||++ +|+||||||+||+++++|.+||+|
T Consensus 88 ~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 88 GIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred ccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeec
Confidence 78999999976 999999765532 3467788999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------cc--c
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS--------SL--N 654 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~--------~~--~ 654 (708)
||+|+-+.-+...++..++|..|.|||++.+. .|+...||||+||+++||++++.-|......... .. .
T Consensus 164 FGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 164 FGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred cchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence 99999776555557778899999999998876 6899999999999999999999998754322100 00 0
Q ss_pred cccccccccCCC-----CCCCCchhH---HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 655 TDIALDEILDPR-----LPPPSRSVQ---EKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 655 ~~~~~~~~~~~~-----~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.........+.+ ...+..... ....+..+++.+|++++|++|.|++.+++|
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 000011111111 110000111 111367889999999999999999999886
No 73
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.4e-38 Score=332.23 Aligned_cols=255 Identities=23% Similarity=0.330 Sum_probs=199.2
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|.. .+++.||+|++++... ........+..|..+++++ +||||+++++++..++..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV-NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 3699999999999965 4688999999975321 1223345688899999988 69999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (329)
T cd05588 80 GGDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT 153 (329)
T ss_pred CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCcc
Confidence 99999988644 3489999999999999999999999 99999999999999999999999999987533333333
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-cccccccccCCCCCCCCchhHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-TDIALDEILDPRLPPPSRSVQEKL 678 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 678 (708)
....|++.|+|||++.+..++.++||||+||++|||++|+.||+........... .......+.......+.. ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~ 229 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS----LS 229 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCC----CC
Confidence 4567899999999999988999999999999999999999999743321111100 111112222222222211 12
Q ss_pred HHHHHHHHhccCCCCCCCCC------HHHHHHHhh
Q 039322 679 ISIMEVAFSCLNESPESRPT------MKVVTQQVR 707 (708)
Q Consensus 679 ~~l~~li~~cl~~dP~~RPs------~~evl~~l~ 707 (708)
..+.+++.+|++.||++||+ ++++++|-+
T Consensus 230 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~ 264 (329)
T cd05588 230 VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPF 264 (329)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCC
Confidence 35788999999999999997 788887643
No 74
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6.3e-39 Score=334.49 Aligned_cols=247 Identities=22% Similarity=0.266 Sum_probs=198.3
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccC
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLER 520 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 520 (708)
+.||+|+||.||++.. .+|+.||+|++++... ........+..|+++++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3689999999999964 4789999999875321 1123345678899999999999999999999999999999999999
Q ss_pred CCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 521 GSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 521 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
|+|.+++.... .+++..+..++.|++.||+|||+ . ||+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (325)
T cd05594 80 GELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 153 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence 99999886543 48999999999999999999997 6 99999999999999999999999999987544333333
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~--------~~~~~~i~~~~~~~p~~----~~~ 221 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEIRFPRT----LSP 221 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH--------HHHHHHHhcCCCCCCCC----CCH
Confidence 445789999999999988999999999999999999999999863221 11111122222211111 123
Q ss_pred HHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 680 SIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
++.+++.+||++||++|+ +++++++|-+
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 254 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKF 254 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCC
Confidence 578899999999999996 8999998754
No 75
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.2e-38 Score=331.22 Aligned_cols=247 Identities=23% Similarity=0.339 Sum_probs=197.3
Q ss_pred ceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|..+ +++.||+|++.+... ......+.+..|.+++..+ +||||+++++++...+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHH-hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence 36999999999999664 688999999875211 1122345677888888876 69999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++.... .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~ 153 (320)
T cd05590 80 GGDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153 (320)
T ss_pred CchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc
Confidence 999999886543 488999999999999999999999 99999999999999999999999999987543333334
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--------~~~~~~i~~~~~~~~~~----~~~ 221 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDEVVYPTW----LSQ 221 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCCCCCCCC----CCH
Confidence 456789999999999988899999999999999999999999974321 11222222222222111 223
Q ss_pred HHHHHHHhccCCCCCCCCCH------HHHHHHhh
Q 039322 680 SIMEVAFSCLNESPESRPTM------KVVTQQVR 707 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~------~evl~~l~ 707 (708)
.+.+++.+|++.||++||++ +++++|-+
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~ 255 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPF 255 (320)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCC
Confidence 57889999999999999998 77777643
No 76
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.9e-38 Score=318.77 Aligned_cols=260 Identities=21% Similarity=0.312 Sum_probs=207.3
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|.. .+++.||||.++.... ........+..|+++++.++||||+++++++...+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM-MDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc-CCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 5789999999999999999965 4789999998764221 2234456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 515 YELLERGSLAAILSSDTA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
+||+++|+|.+++..... ...+++..+..++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 999999999998854322 23478899999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........++..|+|||.+.+..++.++|+||+|+++|||++|+.||..... ........+.....++ ..
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~--~~ 229 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLFSLCQKIEQCDYPP--LP 229 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc------cHHHHHHHHhcCCCCC--CC
Confidence 433333345688899999999888899999999999999999999999853211 0011111111111111 11
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.+++.+||+.+|++||++.+|++.++
T Consensus 230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~ 263 (267)
T cd08228 230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAK 263 (267)
T ss_pred hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHH
Confidence 2233456889999999999999999999999875
No 77
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.7e-38 Score=331.26 Aligned_cols=254 Identities=23% Similarity=0.325 Sum_probs=197.7
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|.. .+++.||+|++++... ........+..|+.++.++ +||||+++++++..++..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHh-cchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence 4699999999999965 4688999999976321 1223455678888888777 79999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~ 153 (329)
T cd05618 80 GGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 153 (329)
T ss_pred CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc
Confidence 99999988644 3489999999999999999999999 99999999999999999999999999997543333333
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-cccccccccCCCCCCCCchhHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-TDIALDEILDPRLPPPSRSVQEKL 678 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 678 (708)
....|+..|+|||++.+..++.++|||||||++|||++|+.||+........... .......+.......+. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~----~~~ 229 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLS 229 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCC----CCC
Confidence 4567899999999999989999999999999999999999999643221111111 01111122222222111 122
Q ss_pred HHHHHHHHhccCCCCCCCCC------HHHHHHHh
Q 039322 679 ISIMEVAFSCLNESPESRPT------MKVVTQQV 706 (708)
Q Consensus 679 ~~l~~li~~cl~~dP~~RPs------~~evl~~l 706 (708)
..+.+++.+||+.||++||+ +.++++|-
T Consensus 230 ~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05618 230 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 263 (329)
T ss_pred HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCC
Confidence 35778999999999999998 57887763
No 78
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.4e-38 Score=328.06 Aligned_cols=263 Identities=23% Similarity=0.330 Sum_probs=202.7
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... ++..+|+|.+.... .....+.+.+|++++++++|+||+++++++..++..++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence 368999999999999999999664 68889999887532 12345678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... .+++..+..++.|++.|++|||+.+ +++||||||+||+++.++.+||+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (333)
T ss_pred EEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence 999999999999996543 4788999999999999999999752 79999999999999999999999999987553
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc---------ccccc---cccc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS---------LNTDI---ALDE 661 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~---------~~~~~---~~~~ 661 (708)
.. ......++..|+|||++.+..++.++|||||||++|||++|+.||.......... ..... ....
T Consensus 156 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
T cd06650 156 DS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRP 233 (333)
T ss_pred hh--ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCC
Confidence 22 1233468899999999998889999999999999999999999987432110000 00000 0000
Q ss_pred ------ccCCCCCCC----------------CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ------ILDPRLPPP----------------SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ------~~~~~~~~~----------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+...+. .........++.+++.+||++||++|||++|+++|-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 000000000 0000011245789999999999999999999998754
No 79
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=340.20 Aligned_cols=252 Identities=22% Similarity=0.322 Sum_probs=206.7
Q ss_pred hccccccceeccccCccEEEEEeCCC-cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEE-ee----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSG-QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFC-SH---- 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~-~~---- 507 (708)
..++++.++|.+|||+.||.|....+ ..||+|++... +........+|+++|++|+ |+|||.+++.. ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~----de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN----DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN 111 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC----CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence 35788899999999999999976555 99999998752 4566788999999999996 99999999933 21
Q ss_pred --CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 508 --ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 508 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
..+.+|.||||.||.|-|++..+... .|++.++++|++++++|+++||.. .|+|||||||.+|||+..+++.||||
T Consensus 112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 112 NGVWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred CceeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence 13578999999999999999866543 399999999999999999999986 45799999999999999999999999
Q ss_pred cccccccCCCC-Ccc--------ccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc
Q 039322 586 FGIAKFLKPES-SNW--------TEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL 653 (708)
Q Consensus 586 fg~a~~~~~~~-~~~--------~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~ 653 (708)
||.|+...... ... -...-|+.|+|||++. +...++|+|||||||+||-|+....||+..+
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg------- 262 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG------- 262 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-------
Confidence 99998543322 111 1134689999999874 5678999999999999999999999998322
Q ss_pred ccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.-++++.++..++. +.....|..||+.||+.||.+||++-+|+..+
T Consensus 263 -----~laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 263 -----KLAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred -----ceeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 23455555554432 44566799999999999999999999998875
No 80
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4e-38 Score=321.13 Aligned_cols=257 Identities=21% Similarity=0.375 Sum_probs=203.1
Q ss_pred HhccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH 507 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~ 507 (708)
+.++|++.+.||+|+||.||+|... +++.||+|++.... ......++.+|+.+++.++|+||+++++++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 4578999999999999999998643 35679999986421 22345678999999999999999999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhccccc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTA-------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE 580 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 580 (708)
++..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~ 157 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 157 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCC
Confidence 9999999999999999999865321 12367889999999999999999998 9999999999999999999
Q ss_pred EEEeecccccccCCCCCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 039322 581 AHVADFGIAKFLKPESSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI 657 (708)
Q Consensus 581 ~kl~Dfg~a~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~ 657 (708)
++|+|||++.......... ....+++.|+|||.+.+..++.++||||||+++|||++ |..||..... ..
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--------~~ 229 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--------EQ 229 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HH
Confidence 9999999987554322211 12345678999999988889999999999999999999 7888863221 11
Q ss_pred ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+............. .+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 230 ~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 230 VLRFVMEGGLLDKPDN---CPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHcCCcCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1111122222111111 2235889999999999999999999999875
No 81
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-40 Score=307.92 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=215.3
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+-|++..++|+|+||+||+|.+ .+|..+|||++..+ .+.+++..|+.+|++++.|++|++||.+.....+|+|
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~------sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD------TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc------chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEee
Confidence 3477888999999999999955 46999999998753 4578899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||||-.|+..|.+..++ +.+++.++..+++.-.+||+|||.. .-+|||||+.|||+..+|.+||+|||.|....+
T Consensus 107 MEYCGAGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD 181 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD 181 (502)
T ss_pred hhhcCCCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhh
Confidence 99999999999997654 6699999999999999999999998 779999999999999999999999999987765
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.-.......||+.|||||++..-.|+.++||||+|+...||..|++||.....+.... .+....++.....
T Consensus 182 TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF---------MIPT~PPPTF~KP 252 (502)
T KOG0574|consen 182 TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF---------MIPTKPPPTFKKP 252 (502)
T ss_pred hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE---------eccCCCCCCCCCh
Confidence 5455667899999999999999999999999999999999999999987543221111 1122333333445
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
..+..++-+++++|+-+.|++|-|+-++++|-
T Consensus 253 E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 253 EEWSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred HhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 66677899999999999999999999999874
No 82
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.7e-38 Score=328.07 Aligned_cols=264 Identities=21% Similarity=0.290 Sum_probs=199.7
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||+|++..... ......+.+|+++++.++||||+++++++..++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE---EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc---cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEE
Confidence 368999999999999999999764 688999999875321 1223457789999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+. ++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 81 v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 81 VFEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred EEECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 999996 58888876543 3478899999999999999999999 99999999999999999999999999997554
Q ss_pred CCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc---------cccccc-----c
Q 039322 594 PESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS---------SLNTDI-----A 658 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~---------~~~~~~-----~ 658 (708)
..........+++.|+|||++.+ ..++.++||||+||++|||++|+.||......... ...... .
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 155 VPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred CCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 33333345678899999998765 45788999999999999999999999743211000 000000 0
Q ss_pred cccccCCCCC--CCCchhH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LDEILDPRLP--PPSRSVQ-----EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~~~~~--~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......... .+..... .....+.+++.+|++.||++|||++|+++|=+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~ 290 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEY 290 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcc
Confidence 0000000000 0000000 01235778999999999999999999998743
No 83
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.8e-39 Score=336.08 Aligned_cols=257 Identities=21% Similarity=0.270 Sum_probs=200.4
Q ss_pred cccccceeccccCccEEEEEe----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCee
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~ 511 (708)
+|++.+.||+|+||.||++.. .+++.||+|++.+..........+.+..|+++++.+ +|++|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999864 358899999987532212223355688899999999 499999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999986543 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-ccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 592 LKPESS-NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 592 ~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
+..... ......|+..|+|||++.+. .++.++|||||||++|||+||+.||........ .......+.......
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~ 230 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT----QSEVSRRILKCDPPF 230 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC----HHHHHHHHhcCCCCC
Confidence 543322 22345789999999998765 478899999999999999999999963221100 001111111111111
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
+. .....+.+++.+||+.||++|| +++++++|-+
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 269 (332)
T cd05614 231 PS----FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF 269 (332)
T ss_pred CC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence 11 1223577899999999999999 7889988754
No 84
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.9e-39 Score=339.26 Aligned_cols=258 Identities=22% Similarity=0.258 Sum_probs=202.6
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..++|++.+.||+|+||.||+|... +++.||+|++.+.. .......+.+..|+++++.++||||+++++++.+++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFE-MIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-hhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 3478999999999999999999654 68899999986421 011123455788999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++... .+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 999999999999998643 378888999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCC-ccccccccccccCccccccC----CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 593 KPESS-NWTEFAGTYGYVAPELAYTM----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 593 ~~~~~-~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
..... ......|++.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+.....
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~~~~ 264 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------VGTYSKIMDHKN 264 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH--------HHHHHHHHcCCC
Confidence 43322 22345789999999988653 378899999999999999999999974321 111122222111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPES--RPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~ 707 (708)
..........+..+.+++.+|++.+|++ |||++|+++|-+
T Consensus 265 ~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 265 SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 0000011112345788999999999998 999999998754
No 85
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.7e-38 Score=330.54 Aligned_cols=247 Identities=24% Similarity=0.315 Sum_probs=198.1
Q ss_pred ceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|... +++.||+|++++... ........+..|.+++..+ +||+|+++++++..++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVI-LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence 35899999999999654 578999999875311 1123345677888888866 79999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (321)
T cd05591 80 GGDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 153 (321)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCccc
Confidence 999999886543 488999999999999999999999 99999999999999999999999999997654333334
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++||||+||++|||++|+.||+.... ......+.......+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~--------~~~~~~i~~~~~~~p~~----~~~ 221 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE--------DDLFESILHDDVLYPVW----LSK 221 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCC----CCH
Confidence 456789999999999988899999999999999999999999974321 12222222222222111 123
Q ss_pred HHHHHHHhccCCCCCCCC-------CHHHHHHHhh
Q 039322 680 SIMEVAFSCLNESPESRP-------TMKVVTQQVR 707 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RP-------s~~evl~~l~ 707 (708)
++.+++.+|+++||++|| +++++++|-+
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~ 256 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPF 256 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCc
Confidence 577899999999999999 8889887743
No 86
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.3e-38 Score=324.75 Aligned_cols=264 Identities=23% Similarity=0.313 Sum_probs=202.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|..+ +++.||+|++..... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE--NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc--cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEE
Confidence 46889999999999999999764 688999999875322 123356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||++++.+..+.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 79 FEYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred EecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 9999987776554322 3488999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cccc---------cc
Q 039322 595 ESS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLNT---------DI 657 (708)
Q Consensus 595 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~~---------~~ 657 (708)
... ......++..|+|||++.+..++.++||||+||++|||++|+.||......... .... ..
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 153 GSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred cccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 322 223456899999999998888999999999999999999999999743211000 0000 00
Q ss_pred ccccccCCCCCCCC----chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPS----RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+...... ......+..+.+++++|+++||++|||++|+++|=+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~ 286 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPA 286 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 00000000000000 000112346889999999999999999999998754
No 87
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=322.38 Aligned_cols=250 Identities=24% Similarity=0.399 Sum_probs=204.4
Q ss_pred cccccceeccccCccEEEEEeC---CCc--EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP---SGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~---~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
.....+.||+|.||.||+|..- .|+ .||||.-+.+. ...+.+.|+.|..+|++++||||++++|.|.+ ...
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~---t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~ 465 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC---TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPM 465 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC---ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cce
Confidence 3445668999999999999542 233 48889987653 33458889999999999999999999999987 467
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
|+|||.++.|-|..|++.++ ..++......+++||+.||+|||++ .+|||||..+|||+.+...||++|||+++.
T Consensus 466 WivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred eEEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhh
Confidence 99999999999999998665 4688899999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcccc-ccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCC
Q 039322 592 LKPESSNWTE-FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 592 ~~~~~~~~~~-~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
++.+.++... ..-+..|||||.+.-.+++.++|||.||+++||++. |..||.+.. ....+..+.++...+
T Consensus 541 ~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk--------NsDVI~~iEnGeRlP 612 (974)
T KOG4257|consen 541 LEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK--------NSDVIGHIENGERLP 612 (974)
T ss_pred ccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc--------ccceEEEecCCCCCC
Confidence 8766554333 223579999999999999999999999999999996 999997432 223333444444433
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.+..++. .++.|+.+||++||.+||++.|+...|
T Consensus 613 ~P~nCPp---~LYslmskcWayeP~kRPrftei~~~l 646 (974)
T KOG4257|consen 613 CPPNCPP---ALYSLMSKCWAYEPSKRPRFTEIKAIL 646 (974)
T ss_pred CCCCCCh---HHHHHHHHHhccCcccCCcHHHHHHHH
Confidence 3333333 467788899999999999999988765
No 88
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.4e-38 Score=315.57 Aligned_cols=251 Identities=24% Similarity=0.423 Sum_probs=202.6
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
++|++.+.||+|+||.||.|...++..+|+|.+.... ...+.+.+|+.++++++||||+++++++...+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-----MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-----ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 5788899999999999999988777789999987532 12456899999999999999999999999989999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+.+|+|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+.....+
T Consensus 79 e~~~~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 79 EYMSNGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred EcCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence 9999999999997543 2589999999999999999999999 9999999999999999999999999998765433
Q ss_pred CCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 596 SSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 596 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
... .....++..|+|||+..+..++.++||||||+++|+|++ |+.||..... ......+...........
T Consensus 154 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 225 (256)
T cd05113 154 EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--------SETVEKVSQGLRLYRPHL 225 (256)
T ss_pred ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHHhcCCCCCCCCC
Confidence 221 112335678999999988889999999999999999998 9999863321 111111112111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.+|++||++.++++.++
T Consensus 226 ---~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 226 ---ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 2346889999999999999999999999874
No 89
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=6.1e-38 Score=320.48 Aligned_cols=256 Identities=27% Similarity=0.457 Sum_probs=205.5
Q ss_pred hccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
..+|.+.+.||+|+||.||+|... +++.||+|.++... ..+..+.+.+|++++++++|+||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA---SNDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC---CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 357888999999999999999653 34789999987632 123457899999999999999999999999999
Q ss_pred CeeEEEEEeccCCCHHHHhcccc-----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 039322 509 RHSFLVYELLERGSLAAILSSDT-----------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 577 (708)
+..++||||+++|+|.+++...+ ....+++.++..++.|++.|++|||++ +++||||||+||+++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~ 157 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGY 157 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcC
Confidence 99999999999999999997543 124578999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccc
Q 039322 578 EYEAHVADFGIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLN 654 (708)
Q Consensus 578 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~ 654 (708)
++.+||+|||++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~------- 230 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN------- 230 (280)
T ss_pred CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH-------
Confidence 99999999999975432221 1123345688999999999999999999999999999998 9999863221
Q ss_pred cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+.......... ..+..+.+++.+||+.||++||++.||++.|+
T Consensus 231 -~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 231 -EEVIECITQGRLLQRPR---TCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred -HHHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11122222222222111 12345889999999999999999999999875
No 90
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.2e-38 Score=328.98 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=198.7
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC-CceeeEEEEEeeCCeeEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH-RNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~l~~~~~~~~~~~lv 514 (708)
+|++.+.||+|+||.||+|... +++.||+|++.+... ......+.+..|.+++..++| ++|+++++++...+..|+|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence 5788899999999999999654 578999999875321 112345667889999999976 5688899999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 80 MEYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999999986543 478999999999999999999999 999999999999999999999999999875433
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........|++.|+|||++.+..++.++||||+||++|||+||+.||..... ......+.......+..
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~~~~~~~~-- 223 (324)
T cd05587 154 GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--------DELFQSIMEHNVSYPKS-- 223 (324)
T ss_pred CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCCC--
Confidence 33333455789999999999998899999999999999999999999974321 11122222222221111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTM-----KVVTQQ 705 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 705 (708)
....+.+++.+||++||++||+. +++.+|
T Consensus 224 --~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 224 --LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred --CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 22357789999999999999976 677665
No 91
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=7.7e-38 Score=316.20 Aligned_cols=253 Identities=21% Similarity=0.380 Sum_probs=204.1
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|++|.||+|...+++.||+|.+... ....+.+.+|+.++++++|+||+++++++...+..+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-----TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-----chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE
Confidence 3689999999999999999998888889999997642 12356789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 80 TEYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred EecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 99999999999997543 24578999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 595 ESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 595 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.... .....++..|+|||+..++.++.++||||||+++|+|+| |+.||..... ......+......+...
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~ 227 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN--------SDVMSALQRGYRMPRME 227 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH--------HHHHHHHHcCCCCCCCC
Confidence 2211 122345678999999988889999999999999999998 9999863221 11111111111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+..+.+++.+||+.+|++||+++++.+.|+
T Consensus 228 ---~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 228 ---NCPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred ---CCCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 12335788999999999999999999999875
No 92
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.1e-38 Score=342.60 Aligned_cols=252 Identities=20% Similarity=0.218 Sum_probs=202.6
Q ss_pred ccccccceeccccCccEEEEEe-CC-CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
..|.+.+.||+|++|.||+|.. .+ ++.||+|.+... .......+..|+++++.++||||+++++++..++..|+
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN----DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 4589999999999999999954 34 677888876542 23345567889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 514 VYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence 999999999999886432 234578999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 593 KPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 593 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+......+.
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--------~~~~~~~~~~~~~~~ 291 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--------REIMQQVLYGKYDPF 291 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 43322 12345689999999999988899999999999999999999999863221 112222222222211
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
+.. ....+.+++.+||+.||++||++++++++
T Consensus 292 ~~~---~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 292 PCP---VSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred Ccc---CCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 111 22358889999999999999999999864
No 93
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.6e-39 Score=339.80 Aligned_cols=254 Identities=24% Similarity=0.330 Sum_probs=204.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.+.+.||+|+||.||+|... +|+.||+|+++.... ........+..|++++..++|+||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDM-IKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHH-hhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence 46889999999999999999664 689999999875211 1113456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 80 MEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred EcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 9999999999999765 3488999999999999999999998 999999999999999999999999999986654
Q ss_pred CC-----------------------------CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 039322 595 ES-----------------------------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFL 645 (708)
Q Consensus 595 ~~-----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~ 645 (708)
.. .......|++.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 33 1223456899999999999999999999999999999999999998743
Q ss_pred ccccccccccccccccccC--CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHhh
Q 039322 646 SLISSSSLNTDIALDEILD--PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPT-MKVVTQQVR 707 (708)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~l~ 707 (708)
... .....+.. .....+... .....+.+++.+|+. ||++||+ ++|+++|-+
T Consensus 234 ~~~--------~~~~~i~~~~~~~~~p~~~--~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 234 TLQ--------ETYNKIINWKESLRFPPDP--PVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred CHH--------HHHHHHhccCCcccCCCCC--CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 211 11111111 111111111 023457889999997 9999999 999998754
No 94
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.3e-37 Score=315.32 Aligned_cols=253 Identities=24% Similarity=0.429 Sum_probs=203.5
Q ss_pred ccccccceeccccCccEEEEEeCC----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
++|++.+.||+|+||.||+|.++. ...||||.++... .......+.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS---SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 678999999999999999997642 4579999987532 233456788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++++|.+++.... ..+++..+++++.|++.|++|||+. +++||||+|+||++++++.++|+|||++..
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 81 MIITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred EEEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 99999999999999997644 3589999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCC
Q 039322 592 LKPESSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 592 ~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
........ ....++..|+|||.+.+..++.++||||||+++|+|++ |..||..... ....+.+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~ 227 (266)
T cd05033 156 LEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--------QDVIKAVEDGYRL 227 (266)
T ss_pred ccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--------HHHHHHHHcCCCC
Confidence 65222221 12334578999999998889999999999999999998 9999853221 1111112111111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+... ..+..+.+++.+||+.+|++||+++|++++|.
T Consensus 228 ~~~~---~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~ 263 (266)
T cd05033 228 PPPM---DCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263 (266)
T ss_pred CCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1111 22345889999999999999999999999874
No 95
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.9e-38 Score=323.30 Aligned_cols=257 Identities=21% Similarity=0.245 Sum_probs=202.1
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
.|+..+.||+|+||.||++.. .+++.||+|++..... ........+.+|++++++++|+||+++++++..++..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhh-hhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 377889999999999999965 4688999999865221 11223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||++......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 80 TLMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred eccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 9999999999886432 24589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
.......|+..|+|||++.+..++.++||||+|+++|||++|+.||....... ........+...... ...
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~----~~~ 226 (285)
T cd05605 156 -ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV----KREEVERRVKEDQEE----YSE 226 (285)
T ss_pred -CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh----HHHHHHHHhhhcccc----cCc
Confidence 22234568899999999988889999999999999999999999997422100 000011111111111 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 676 EKLISIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
.....+.+++.+||+.||++|| +++++++|-+
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~ 263 (285)
T cd05605 227 KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPF 263 (285)
T ss_pred ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcC
Confidence 2334578999999999999999 8999987643
No 96
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.8e-38 Score=334.55 Aligned_cols=253 Identities=22% Similarity=0.304 Sum_probs=195.2
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|.. .+++.||+|++++... ........+..|++++.+++|++|+++++++.+++..++|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM-LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence 4788999999999999999965 4688999999875211 1122345788899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 80 MEFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred EcCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999996543 489999999999999999999999 999999999999999999999999999875432
Q ss_pred CCC-----------------------------------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCC
Q 039322 595 ESS-----------------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGK 639 (708)
Q Consensus 595 ~~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~ 639 (708)
... ......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 110 012346899999999999988999999999999999999999
Q ss_pred CCCCccccccccccccccccccccC----CCCCCCCchhHHHHHHHHHHHHhccC--CCCCCCCCHHHHHHHhh
Q 039322 640 HPRDFLSLISSSSLNTDIALDEILD----PRLPPPSRSVQEKLISIMEVAFSCLN--ESPESRPTMKVVTQQVR 707 (708)
Q Consensus 640 ~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~evl~~l~ 707 (708)
.||..... ......+.. ..+++.. .. .....+++.+++. .++..||+++|+++|-+
T Consensus 234 ~Pf~~~~~--------~~~~~~i~~~~~~~~~p~~~-~~---s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~ 295 (363)
T cd05628 234 PPFCSETP--------QETYKKVMNWKETLIFPPEV-PI---SEKAKDLILRFCCEWEHRIGAPGVEEIKTNPF 295 (363)
T ss_pred CCCCCCCH--------HHHHHHHHcCcCcccCCCcC-CC---CHHHHHHHHHHcCChhhcCCCCCHHHHhCCCC
Confidence 99974321 111111111 1111111 11 1234556656433 34445799999998743
No 97
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-39 Score=309.04 Aligned_cols=263 Identities=25% Similarity=0.368 Sum_probs=203.3
Q ss_pred HhccccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee-----
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH----- 507 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----- 507 (708)
....|...+.||+|+||.|+.|. ..+|+.||||++..+. ......++..+|+++++.++|+||+.+.+.+.-
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F--~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPF--ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhh--hchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 34566667889999999999995 4579999999987543 334567789999999999999999999998865
Q ss_pred CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
-+..|+|+|+|+ .+|...++..+ .++......+.+|+.+||.|+|+. +|+|||+||+|++++.+..+||+|||
T Consensus 98 f~DvYiV~elMe-tDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 98 FNDVYLVFELME-TDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred cceeEEehhHHh-hHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccc
Confidence 346899999995 49999997654 388899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCC--CCccccccccccccCccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------c-----
Q 039322 588 IAKFLKPE--SSNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------S----- 652 (708)
Q Consensus 588 ~a~~~~~~--~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~----- 652 (708)
+|+..... ....+..+.|..|.|||.+. ...|+.+.||||.||++.||++|+.-|.+....... +
T Consensus 171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 99987542 33456778899999999654 567999999999999999999999999764322100 0
Q ss_pred ---cccccccccccCCCCCCCCch----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 653 ---LNTDIALDEILDPRLPPPSRS----VQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 653 ---~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
..........+......+... .+.......+|+.+|+..||.+|+|++|.++|
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 001111111111111111111 11122345688889999999999999999986
No 98
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=9.6e-38 Score=314.57 Aligned_cols=254 Identities=26% Similarity=0.385 Sum_probs=208.2
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|.+.+.||+|++|.||+|.. .+++.|++|.+.... ......+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK--MNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh--CCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEE
Confidence 477889999999999999965 468899999986422 12345678899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++.... ...+++..++.++.|++.|+.|||+. |++|+||+|+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 79 EYAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred EeCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 9999999999997643 24588999999999999999999998 9999999999999999999999999999876554
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
........+++.|+|||+..+..++.++|+||||+++|+|++|+.||..... ............+....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~--- 223 (256)
T cd08529 155 TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--------GALILKIIRGVFPPVSQ--- 223 (256)
T ss_pred cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCcc---
Confidence 4444445688999999999988899999999999999999999999874321 11112222222222111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+.+++.+||+.+|++||++.+++++-+
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 255 (256)
T cd08529 224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPS 255 (256)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHhhCCC
Confidence 23346889999999999999999999998744
No 99
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.6e-38 Score=316.98 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=201.7
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|++.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++++++..++..++|
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP----GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc----cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 6799999999999999999965 578899999986531 12345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.++++... .+++..+..++.|++.|++|||+. +++|||++|+||+++.++.++|+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 85 MEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 99999999999986433 478999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC-
Q 039322 595 ESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP- 670 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 670 (708)
.........++..|+|||.+. ...++.++||||+|+++|||++|+.||........ ...+......++
T Consensus 159 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~ 230 (267)
T cd06646 159 TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--------LFLMSKSNFQPPK 230 (267)
T ss_pred cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh--------heeeecCCCCCCC
Confidence 333333456888999999874 34477899999999999999999999853221100 001111111111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
..........+.+++.+||+.+|++|||++++++++
T Consensus 231 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 011112335688999999999999999999999886
No 100
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.3e-38 Score=329.91 Aligned_cols=246 Identities=23% Similarity=0.298 Sum_probs=193.0
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHH-HHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVK-ALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|.. .+|+.||+|++.+.... .......+..|.. +++.++||||+++++++..++..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL-KKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 3699999999999966 46899999998752111 1122344555554 5678899999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (323)
T cd05575 80 GGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT 153 (323)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc
Confidence 999999986543 478999999999999999999999 99999999999999999999999999987543333333
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ....+.+.......... ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~~~~~----~~~ 221 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT--------AEMYDNILNKPLRLKPN----ISV 221 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCC----CCH
Confidence 456789999999999998899999999999999999999999874221 11112222222211111 134
Q ss_pred HHHHHHHhccCCCCCCCCCH----HHHHHHh
Q 039322 680 SIMEVAFSCLNESPESRPTM----KVVTQQV 706 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~----~evl~~l 706 (708)
.+.+++.+|++.||++||++ .|++++-
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~~~~~il~~~ 252 (323)
T cd05575 222 SARHLLEGLLQKDRTKRLGAKDDFLEIKNHV 252 (323)
T ss_pred HHHHHHHHHhhcCHHhCCCCCCCHHHHHcCC
Confidence 57889999999999999987 4776653
No 101
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.1e-38 Score=326.62 Aligned_cols=245 Identities=26% Similarity=0.352 Sum_probs=192.1
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|.. .+++.||+|+++..... .....+.+..|..++... +||||+++++++..++..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL-EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 3699999999999965 45788999998753211 112344556677776654 79999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 gg~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~ 153 (316)
T cd05592 80 GGDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA 153 (316)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc
Confidence 999999986543 488999999999999999999999 99999999999999999999999999998654333344
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. . ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~-~---~~~ 221 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--------DELFDSILNDRPHFPR-W---ISK 221 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCC-C---CCH
Confidence 456789999999999988899999999999999999999999974321 1111112111111111 1 123
Q ss_pred HHHHHHHhccCCCCCCCCCHH-HHHHH
Q 039322 680 SIMEVAFSCLNESPESRPTMK-VVTQQ 705 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~~-evl~~ 705 (708)
.+.+++.+||+.||++||++. ++.+|
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 467889999999999999875 66554
No 102
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.9e-38 Score=332.16 Aligned_cols=262 Identities=25% Similarity=0.385 Sum_probs=196.5
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----Ce
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA-----RH 510 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-----~~ 510 (708)
+|++.+.||+|+||.||+|.. .+|+.||||++..... .......+.+|++++++++||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE--HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc--cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCce
Confidence 478889999999999999965 4689999999875321 223445788999999999999999999988543 24
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.|+||||+. ++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 79 IYVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 799999995 68999886543 489999999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCC---ccccccccccccCcccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cccccc-
Q 039322 591 FLKPESS---NWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLNTDI- 657 (708)
Q Consensus 591 ~~~~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~~~~- 657 (708)
....... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ......
T Consensus 152 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 231 (338)
T cd07859 152 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231 (338)
T ss_pred ccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 5432221 2234578999999998865 57889999999999999999999999643211000 000000
Q ss_pred -----------ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 -----------ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 -----------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+......+...........+.+++.+||+.||++|||++|+++|-+
T Consensus 232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~ 292 (338)
T cd07859 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPY 292 (338)
T ss_pred HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCch
Confidence 00000000000000001112345778999999999999999999998743
No 103
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.1e-38 Score=336.37 Aligned_cols=252 Identities=20% Similarity=0.264 Sum_probs=196.4
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
.|+..+.||+|+||.||+|.. .+++.||+|++..... ........+..|++++++++|+||+++++++.+++..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV-LNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 578889999999999999954 5688999999875211 11234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 81 DYIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999986543 478899999999999999999999 9999999999999999999999999997543110
Q ss_pred CC-----------------------------------------------ccccccccccccCccccccCCCCcchhHHHH
Q 039322 596 SS-----------------------------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628 (708)
Q Consensus 596 ~~-----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dvwsl 628 (708)
.. ......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 00 0123468999999999988889999999999
Q ss_pred HHHHHHHHhCCCCCCccccccccccccccccccccC----CCCCCCCchhHHHHHHHHHHHHh--ccCCCCCCCCCHHHH
Q 039322 629 GVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD----PRLPPPSRSVQEKLISIMEVAFS--CLNESPESRPTMKVV 702 (708)
Q Consensus 629 G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~ev 702 (708)
||++|||++|+.||...... .....+.. ...+... ....++.+++.+ |+..+|..||+++|+
T Consensus 235 G~il~elltG~~Pf~~~~~~--------~~~~~i~~~~~~~~~~~~~----~~s~~~~dli~~ll~~~~~~~~R~~~~~~ 302 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPT--------ETQLKVINWENTLHIPPQV----KLSPEAVDLITKLCCSAEERLGRNGADDI 302 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHH--------HHHHHHHccccccCCCCCC----CCCHHHHHHHHHHccCcccccCCCCHHHH
Confidence 99999999999999742211 11111111 1111111 112346677777 556677779999999
Q ss_pred HHHhh
Q 039322 703 TQQVR 707 (708)
Q Consensus 703 l~~l~ 707 (708)
++|-+
T Consensus 303 l~hp~ 307 (381)
T cd05626 303 KAHPF 307 (381)
T ss_pred hcCcc
Confidence 98743
No 104
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-39 Score=324.58 Aligned_cols=259 Identities=24% Similarity=0.390 Sum_probs=211.2
Q ss_pred HHHHHHHhccccccceeccccCccEEEEEeCC-CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe
Q 039322 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS 506 (708)
Q Consensus 428 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~ 506 (708)
+++++-.-.+..+.++||.|.||.||.|.|+. .-.||||.++. +.-+.++|..|..+|+.++|||+|+++|+|.
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-----DtMeveEFLkEAAvMKeikHpNLVqLLGVCT 333 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 333 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-----cchhHHHHHHHHHHHHhhcCccHHHHhhhhc
Confidence 34455455678889999999999999998764 55799999985 3456889999999999999999999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 507 HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
.+..+|||+|||.+|+|.+||.+... ..++.--.+.+|.||+.|++||.++ ++|||||.++|+|+.++..||++||
T Consensus 334 ~EpPFYIiTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADF 409 (1157)
T KOG4278|consen 334 HEPPFYIITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADF 409 (1157)
T ss_pred cCCCeEEEEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeecc
Confidence 99999999999999999999987653 4567778899999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCccc-cccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC
Q 039322 587 GIAKFLKPESSNWT-EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILD 664 (708)
Q Consensus 587 g~a~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 664 (708)
|+++++..+.+... ...-...|+|||-+....++.|+|||+||+++||+.| |-.||...+. ..+..++.
T Consensus 410 GLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl---------SqVY~LLE 480 (1157)
T KOG4278|consen 410 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---------SQVYGLLE 480 (1157)
T ss_pred chhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH---------HHHHHHHh
Confidence 99999875544321 1223679999999999999999999999999999998 8888875332 11111111
Q ss_pred CCC-CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 665 PRL-PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 665 ~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+ ...++ .++..+++|++.||++.|.+||+++|+-+.++
T Consensus 481 kgyRM~~Pe---GCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 481 KGYRMDGPE---GCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred ccccccCCC---CCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 111 11112 23345888899999999999999999988764
No 105
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.7e-38 Score=327.62 Aligned_cols=250 Identities=22% Similarity=0.313 Sum_probs=199.6
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv 514 (708)
+|++.+.||+|+||.||+|... +++.||+|++++... ........+..|..++..+ +|++|+++++++...+..++|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV-IQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence 5788899999999999999654 578999999876321 1122344567788888777 589999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 80 MEYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred EcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999999986543 488999999999999999999999 999999999999999999999999999975443
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........|++.|+|||++.+..++.++|||||||++|||+||+.||+.... ......+.......+.
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--------~~~~~~i~~~~~~~p~--- 222 (323)
T cd05616 154 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPK--- 222 (323)
T ss_pred CCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCC---
Confidence 33334456789999999999999999999999999999999999999974321 1222222222222221
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTM-----KVVTQQ 705 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 705 (708)
....++.+++.+|+++||++|++. .++.+|
T Consensus 223 -~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 223 -SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred -cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 123357889999999999999984 676654
No 106
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.9e-38 Score=335.45 Aligned_cols=258 Identities=21% Similarity=0.259 Sum_probs=201.1
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..++|++.+.||+|+||.||+|... +++.||+|++.+... ........+.+|+.+++.++||||+++++++..++..+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 3578999999999999999999764 588999999864211 11223456788999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 999999999999999643 378899999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC-ccccccccccccCccccccC----CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 593 KPESS-NWTEFAGTYGYVAPELAYTM----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 593 ~~~~~-~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
..... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+.+...
T Consensus 193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~--------~~~~~~i~~~~~ 264 (370)
T cd05621 193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL--------VGTYSKIMDHKN 264 (370)
T ss_pred ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCc
Confidence 43322 22355799999999998654 367899999999999999999999974321 111222222111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPES--RPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~ 707 (708)
.............+.+++.+|+..+|.+ ||+++|+++|-+
T Consensus 265 ~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 265 SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 1110011122335678888999866654 899999998854
No 107
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-38 Score=308.46 Aligned_cols=258 Identities=26% Similarity=0.396 Sum_probs=198.8
Q ss_pred HHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc--cCCceeeEEEEEeeCC-
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI--RHRNIVKFYGFCSHAR- 509 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~~iv~l~~~~~~~~- 509 (708)
....+....+.||+|.||.||+|.+. |+.||||+|... +...+.+|.++++.+ +|+||+.+++.-..+.
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr-------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g 279 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR-------DERSWFRETEIYQTVMLRHENILGFIAADNKDNG 279 (513)
T ss_pred hhhheeEEEEEecCccccceeecccc-CCceEEEEeccc-------chhhhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence 34567889999999999999999995 889999999762 345677788887765 9999999998875543
Q ss_pred ---eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEccCCCCCeeeCCCCcE
Q 039322 510 ---HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD-----CFPPIVHQDISSKNLLLDLEYEA 581 (708)
Q Consensus 510 ---~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-----~~~~ivH~dlk~~Nill~~~~~~ 581 (708)
.+|||++|++.|||.|||.... ++....++++..+|.||++||.. ..|.|+|||||+.|||+..++.+
T Consensus 280 s~TQLwLvTdYHe~GSL~DyL~r~t----v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 280 SWTQLWLVTDYHEHGSLYDYLNRNT----VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred ceEEEEEeeecccCCcHHHHHhhcc----CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 5799999999999999998754 89999999999999999999964 34789999999999999999999
Q ss_pred EEeecccccccCCCCC----ccccccccccccCccccccCC----C--CcchhHHHHHHHHHHHHh----C------CCC
Q 039322 582 HVADFGIAKFLKPESS----NWTEFAGTYGYVAPELAYTMK----I--TEKCDVYSFGVLVLEAIK----G------KHP 641 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~----~--~~~~DvwslG~~l~ellt----g------~~p 641 (708)
-|+|+|+|........ .....+||.+|||||++...- + -..+||||||.++||+.- | +.|
T Consensus 356 ~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P 435 (513)
T KOG2052|consen 356 CIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP 435 (513)
T ss_pred EEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence 9999999987765532 245678999999999986532 1 136999999999999984 2 345
Q ss_pred CCccccccccccccccccc----cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 642 RDFLSLISSSSLNTDIALD----EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
|...-. .+...++..+ +...|.++..+ ...+.+..+.++++.||..+|..|-|+--+.+.|
T Consensus 436 yyd~Vp---~DPs~eeMrkVVCv~~~RP~ipnrW-~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl 500 (513)
T KOG2052|consen 436 YYDVVP---SDPSFEEMRKVVCVQKLRPNIPNRW-KSDPALRVMAKLMKECWYANPAARLTALRIKKTL 500 (513)
T ss_pred cccCCC---CCCCHHHHhcceeecccCCCCCccc-ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHH
Confidence 542211 1111112112 22223333322 2235567899999999999999999987776654
No 108
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.8e-37 Score=317.41 Aligned_cols=255 Identities=22% Similarity=0.384 Sum_probs=201.7
Q ss_pred ccccccceeccccCccEEEEEe-----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.+|++.+.||+|+||.||+|.. .+++.||+|.+.... .......+.+|++++++++||||+++++++..++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN---NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 5788899999999999999964 246789999987532 22345678899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccccc--------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 039322 511 SFLVYELLERGSLAAILSSDTA--------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 576 (708)
.++||||+++|+|.+++..... ...+++.++..++.|++.||+|||++ +++||||||+||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~ 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIG 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEc
Confidence 9999999999999999853321 23478899999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccc
Q 039322 577 LEYEAHVADFGIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSL 653 (708)
Q Consensus 577 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~ 653 (708)
+++.+||+|||++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~------ 232 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN------ 232 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH------
Confidence 999999999999986543321 1223345678999999988889999999999999999998 9989863221
Q ss_pred ccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.............+... ..+..+.+++.+||+.||++||++.++.++|+
T Consensus 233 --~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 233 --QEVIEMVRKRQLLPCSE---DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred --HHHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 11111111111111111 12335788999999999999999999999885
No 109
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.6e-38 Score=337.22 Aligned_cols=254 Identities=22% Similarity=0.281 Sum_probs=199.7
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +|+.||||++..... ........+.+|+++++.++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM-LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence 46889999999999999999654 689999999875211 1123345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 80 MEYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred ECCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999996543 489999999999999999999999 999999999999999999999999999875432
Q ss_pred CCC--------------------------------------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHH
Q 039322 595 ESS--------------------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAI 636 (708)
Q Consensus 595 ~~~--------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ell 636 (708)
... ......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 110 001235899999999999888999999999999999999
Q ss_pred hCCCCCCccccccccccccccccccccCC--CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHHhh
Q 039322 637 KGKHPRDFLSLISSSSLNTDIALDEILDP--RLPPPSRSVQEKLISIMEVAFSCLNESPESRPT---MKVVTQQVR 707 (708)
Q Consensus 637 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~l~ 707 (708)
+|..||...... .....+... .+..+.. ......+.+++.+|+. +|.+|++ ++|+++|-+
T Consensus 234 ~G~~Pf~~~~~~--------~~~~~i~~~~~~~~~~~~--~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~ 298 (364)
T cd05599 234 VGYPPFCSDNPQ--------ETYRKIINWKETLQFPDE--VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPF 298 (364)
T ss_pred cCCCCCCCCCHH--------HHHHHHHcCCCccCCCCC--CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCC
Confidence 999999743221 111111111 1111110 0112356788889996 9999998 999988643
No 110
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.1e-38 Score=332.69 Aligned_cols=255 Identities=20% Similarity=0.296 Sum_probs=197.4
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|++.+.||+|+||.||+|.. .+++.||+|... ...+.+|++++++++||||+++++++..++..++|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 5799999999999999999954 568899999743 23467899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+|++. ++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|.....
T Consensus 162 ~e~~~-~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 162 LPRYK-TDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred EecCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 99995 6888888653 3478999999999999999999999 999999999999999999999999999975432
Q ss_pred CC-CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc---------------------c
Q 039322 595 ES-SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS---------------------S 652 (708)
Q Consensus 595 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~---------------------~ 652 (708)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||-........ .
T Consensus 235 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 235 INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred ccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 21 2233457899999999999888999999999999999999999886321110000 0
Q ss_pred cccccccccc---------cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 653 LNTDIALDEI---------LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 653 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......... ..+...+........+.++.+++.+||+.||++|||++|++++-+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 0000000000 000001111111233457889999999999999999999998754
No 111
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1e-37 Score=331.55 Aligned_cols=257 Identities=21% Similarity=0.346 Sum_probs=201.9
Q ss_pred hccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSH 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~ 507 (708)
.++|.+.+.||+|+||.||+|... .+..||||+++... .....+.+.+|+++++++. ||||+++++++.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA---RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC---ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 468899999999999999999652 13469999987532 2234567999999999996 9999999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhccccc-------------------------------------------------------
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTA------------------------------------------------------- 532 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 532 (708)
.+..++||||+++|+|.+++.....
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 9999999999999999998864310
Q ss_pred --------------------------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCee
Q 039322 533 --------------------------------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLL 574 (708)
Q Consensus 533 --------------------------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nil 574 (708)
...+++..+..++.|++.||+|||+. +++||||||+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence 12478888999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccc
Q 039322 575 LDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSS 651 (708)
Q Consensus 575 l~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~ 651 (708)
++.++.+||+|||++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~--- 346 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD--- 346 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh---
Confidence 999999999999999865433221 122346778999999988889999999999999999997 99998642110
Q ss_pred ccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 652 SLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+........ ....+..+.+++.+||+.||++|||+.+|.+.|+
T Consensus 347 ----~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~ 395 (400)
T cd05105 347 ----STFYNKIKSGYRMAK---PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVE 395 (400)
T ss_pred ----HHHHHHHhcCCCCCC---CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHH
Confidence 000111111111111 1122346889999999999999999999999875
No 112
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5e-38 Score=326.48 Aligned_cols=246 Identities=23% Similarity=0.300 Sum_probs=196.9
Q ss_pred ceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|... +++.||+|++++... ........+..|.+++..+ +||||+++++++...+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVI-LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36999999999999664 578999999875311 1123345677888888887 69999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (318)
T cd05570 80 GGDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT 153 (318)
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence 999999886543 489999999999999999999999 99999999999999999999999999987543333333
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+.......+. ....
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--------~~~~~~i~~~~~~~~~----~~~~ 221 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--------DELFQSILEDEVRYPR----WLSK 221 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--------HHHHHHHHcCCCCCCC----cCCH
Confidence 445689999999999999999999999999999999999999974321 1111122222221111 1223
Q ss_pred HHHHHHHhccCCCCCCCCCH-----HHHHHHh
Q 039322 680 SIMEVAFSCLNESPESRPTM-----KVVTQQV 706 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~-----~evl~~l 706 (708)
.+.+++.+||+.||++||++ .+++++-
T Consensus 222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~ 253 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGCLPTGEQDIKGHP 253 (318)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHhcCC
Confidence 57889999999999999999 8888763
No 113
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.1e-38 Score=322.16 Aligned_cols=264 Identities=20% Similarity=0.305 Sum_probs=195.9
Q ss_pred ccccccceeccccCccEEEEEe-C-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc---cCCceeeEEEEEee---
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-P-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI---RHRNIVKFYGFCSH--- 507 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~iv~l~~~~~~--- 507 (708)
.+|++.+.||+|+||.||+|.. . +++.||+|.++...... .....+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~ 78 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 78 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC--CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccC
Confidence 3688899999999999999965 2 46789999987533211 1234456677776665 69999999999852
Q ss_pred --CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 508 --ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 508 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
....++||||+. ++|.+++..... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|
T Consensus 79 ~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 79 DRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred CCCCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcc
Confidence 356899999996 599999865432 3478999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc--------ccc
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN--------TDI 657 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~--------~~~ 657 (708)
||++...... .......+++.|+|||.+.+..++.++||||+||++|||++|+.||............ ...
T Consensus 154 fg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 154 FGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 232 (290)
T ss_pred ccceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhh
Confidence 9999865433 2334456899999999998888999999999999999999999999743221100000 000
Q ss_pred c-----c-ccccCCCCCCCC-chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 A-----L-DEILDPRLPPPS-RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~-----~-~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. . ..........+. .........+.+++.+|++.||++|||+.|+++|-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~ 289 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCC
Confidence 0 0 000000000000 001122345779999999999999999999998754
No 114
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.3e-37 Score=315.58 Aligned_cols=260 Identities=22% Similarity=0.324 Sum_probs=207.7
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.+.+.||+|++|.||+|.. .+++.||||.+.... .......+.+.+|+++++.++|+||+++++++..++..+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFD-LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehh-hhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 4688899999999999999964 578999999876521 12234456889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 515 YELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
|||+++++|.+++.... ....+++..++.++.|++.|++|||+. |++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 99999999999986422 234589999999999999999999999 99999999999999999999999999988665
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........++..|+|||++.+..++.++||||||+++|+|++|..||...... .......+.....++. .
T Consensus 158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~--~ 229 (267)
T cd08229 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQCDYPPL--P 229 (267)
T ss_pred cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch------HHHHhhhhhcCCCCCC--C
Confidence 4433334456888999999998888999999999999999999999998632110 0111111111111111 1
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.+++.+||+.||++||||.+|++.++
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 230 SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 1123446889999999999999999999988764
No 115
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.4e-37 Score=312.60 Aligned_cols=252 Identities=25% Similarity=0.478 Sum_probs=203.7
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|++|.||+|...+++.||+|.++... ...+++.+|++++++++|+||+++++++...+..++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-----MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-----ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeee
Confidence 36789999999999999999987778889999987532 2346688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.... ...+++..+..++.|++.|++|||+. |++||||||+||++++++.++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 80 TELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred eecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 99999999999996544 34589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCcc-ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCC
Q 039322 595 ESSNW-TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RLPPPS 671 (708)
Q Consensus 595 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 671 (708)
..... .....+..|+|||+..+..++.++||||||+++|||++ |+.||..... ......+... ..+.+
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~- 226 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--------AEVLQQVDQGYRMPCP- 226 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCC-
Confidence 22111 11223458999999988889999999999999999999 9999863221 1111111111 11111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 227 ---~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 227 ---PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred ---CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 122346889999999999999999999999875
No 116
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.3e-39 Score=309.29 Aligned_cols=257 Identities=26% Similarity=0.308 Sum_probs=196.4
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC-----
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR----- 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 509 (708)
-.|...+++|.|+||.||+|... +++.||||+...+... --+|+++|+.+.|||||++..+|....
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~--------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY--------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc--------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchh
Confidence 46778899999999999999654 5789999998754322 225999999999999999999886432
Q ss_pred eeEEEEEeccCCCHHHHhccc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEeecc
Q 039322 510 HSFLVYELLERGSLAAILSSD-TAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVADFG 587 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg 587 (708)
...+|||||+. +|.++++.. ...++++...++-+.+||.+||+|||+. ||+||||||.|+|+|.+ |.+||||||
T Consensus 96 ~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFG 171 (364)
T KOG0658|consen 96 YLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFG 171 (364)
T ss_pred HHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCC
Confidence 34589999988 999998742 1235578888999999999999999998 99999999999999987 899999999
Q ss_pred cccccCCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------ccccccc-
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLNTDIA- 658 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~~~~~- 658 (708)
.|+...++... .....|..|+|||.+.+. .|+.+.||||.||++.||+.|+.-|...+..... +.-..+.
T Consensus 172 SAK~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 172 SAKVLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred cceeeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99988765444 556788999999988875 5999999999999999999999999864432110 0000000
Q ss_pred ------cccccCCCCCCCCc---hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 659 ------LDEILDPRLPPPSR---SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 659 ------~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
..+...+.+..... .......+..+++.+++.++|.+|.++.|++.|
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 00111122221110 112233467899999999999999999999875
No 117
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.1e-37 Score=313.35 Aligned_cols=252 Identities=23% Similarity=0.387 Sum_probs=201.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|.+.+.||+|++|.||+|... .++.||+|.+... ....+.+.+|++++++++|+||+++++++..++..+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEE
Confidence 56888999999999999999654 5889999998752 22356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 81 TEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred EEeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 99999999999996543 24579999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCcc-ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 595 ESSNW-TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 595 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
..... .....+..|+|||.+.+..++.++||||||+++|||++ |..||+..... .....+........+
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~- 227 (263)
T cd05052 157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLEKGYRMERP- 227 (263)
T ss_pred ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCCCCCCC-
Confidence 32211 11223568999999988889999999999999999998 99998642211 111111110000111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||+.||++|||+.++.+.|+
T Consensus 228 --~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 228 --EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred --CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 112345888999999999999999999999875
No 118
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.7e-38 Score=330.21 Aligned_cols=244 Identities=25% Similarity=0.340 Sum_probs=196.1
Q ss_pred ceeccccCccEEEEEe----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEe
Q 039322 442 YCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
+.||+|+||.||++.. .+|+.||+|++.... ........+..|++++++++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKAT--LKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHH--hhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 5699999999999854 358899999987521 1122345677899999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 039322 518 LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 597 (708)
+++|+|.+++.... .+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 80 ~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 80 LRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 99999999986543 489999999999999999999999 999999999999999999999999999986554433
Q ss_pred ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHH
Q 039322 598 NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677 (708)
Q Consensus 598 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (708)
......|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+.......+.. .
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--------~~~~~~i~~~~~~~p~~----~ 221 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--------KETMTMILKAKLGMPQF----L 221 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH--------HHHHHHHHcCCCCCCCC----C
Confidence 34456789999999999888889999999999999999999999874321 11112222222221111 1
Q ss_pred HHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 039322 678 LISIMEVAFSCLNESPESRPT-----MKVVTQQ 705 (708)
Q Consensus 678 ~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 705 (708)
...+.+++.+||++||++||+ +++++++
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 235778999999999999999 4556654
No 119
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.7e-38 Score=336.76 Aligned_cols=254 Identities=20% Similarity=0.269 Sum_probs=197.4
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.+.+.||+|+||.||+|.. .+++.||||++.+.. .......+.+.+|++++++++||||+++++++.+++..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE-MFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHH-HHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence 4688899999999999999954 578999999986521 11123356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.+..
T Consensus 80 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 80 MEFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999996543 478899999999999999999999 999999999999999999999999999964321
Q ss_pred CCC-----------------------------------------------ccccccccccccCccccccCCCCcchhHHH
Q 039322 595 ESS-----------------------------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYS 627 (708)
Q Consensus 595 ~~~-----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws 627 (708)
... ......||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 100 001246899999999999888999999999
Q ss_pred HHHHHHHHHhCCCCCCccccccccccccccccccccC--CCCCCCCchhHHHHHHHHHHHHhccCCCCCCC---CCHHHH
Q 039322 628 FGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD--PRLPPPSRSVQEKLISIMEVAFSCLNESPESR---PTMKVV 702 (708)
Q Consensus 628 lG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~ev 702 (708)
+||++|||++|+.||...... .....+.. ..+..+. .......+.+++.+|+. +|.+| |++.|+
T Consensus 234 lGvil~elltG~~Pf~~~~~~--------~~~~~i~~~~~~~~~p~--~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~ 302 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSH--------ETYRKIINWRETLYFPD--DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI 302 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHH--------HHHHHHHccCCccCCCC--CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence 999999999999999643211 11111111 1111110 00112357788889997 66665 699999
Q ss_pred HHHhh
Q 039322 703 TQQVR 707 (708)
Q Consensus 703 l~~l~ 707 (708)
++|-+
T Consensus 303 l~hp~ 307 (377)
T cd05629 303 KSHPF 307 (377)
T ss_pred hcCCC
Confidence 98754
No 120
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.8e-38 Score=340.81 Aligned_cols=256 Identities=24% Similarity=0.291 Sum_probs=204.1
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC---
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR--- 509 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--- 509 (708)
..++|.+.+.||+|+||.||+|.. .+|+.||||++..... .......+.+|+..+..++|+|++++.+.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM--SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 457999999999999999999954 5789999999875322 2344567889999999999999999988775432
Q ss_pred -----eeEEEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 039322 510 -----HSFLVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHV 583 (708)
Q Consensus 510 -----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 583 (708)
..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 3679999999999999986532 234588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCC--CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 039322 584 ADFGIAKFLKPES--SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDE 661 (708)
Q Consensus 584 ~Dfg~a~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 661 (708)
+|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~--------~~~~~~ 256 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM--------EEVMHK 256 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHH
Confidence 9999998654321 122345789999999999998999999999999999999999999974221 111122
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.......+.+. .....+.+++.+||+.||++||++.+++++
T Consensus 257 ~~~~~~~~~~~---~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 TLAGRYDPLPP---SISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HhcCCCCCCCC---CCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 22222211111 123458889999999999999999999876
No 121
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.8e-37 Score=316.72 Aligned_cols=254 Identities=25% Similarity=0.436 Sum_probs=202.2
Q ss_pred ccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
.+|.+.+.||+|+||.||++.. .++..+|+|.+... .....+.+.+|++++++++|+||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 6788999999999999999964 23456899998752 2234567899999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccc----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC
Q 039322 510 HSFLVYELLERGSLAAILSSDT----------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY 579 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 579 (708)
..++||||+++++|.+++.... ....+++.+++.++.|++.||+|||++ |++||||||+||++++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 9999999999999999996443 123489999999999999999999999 999999999999999999
Q ss_pred cEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccc
Q 039322 580 EAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTD 656 (708)
Q Consensus 580 ~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 656 (708)
.+||+|||++......... .....++..|+|||++.+..++.++||||||+++|+|++ |..||..... .
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~--------~ 229 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------N 229 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------H
Confidence 9999999999865432211 122345678999999998889999999999999999998 8999863221 1
Q ss_pred cccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 IALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+........... .+.++.+++.+||+.||.+|||+.|+.+.|+
T Consensus 230 ~~~~~i~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 230 EVIECITQGRVLQRPRT---CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred HHHHHHHcCCcCCCCCC---CCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 11122222221111111 2235889999999999999999999988764
No 122
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=9.2e-38 Score=323.81 Aligned_cols=245 Identities=25% Similarity=0.338 Sum_probs=192.4
Q ss_pred ceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|... +++.||||+++..... .......+..|..++... +||||+++++++.+++..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 36999999999999764 5789999998753211 112344566777777764 89999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05619 80 GGDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT 153 (316)
T ss_pred CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCce
Confidence 99999998653 3478999999999999999999999 99999999999999999999999999987543333333
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|+..|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--------~~~~~~i~~~~~~~~~----~~~~ 221 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--------EELFQSIRMDNPCYPR----WLTR 221 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCc----cCCH
Confidence 455789999999999988899999999999999999999999874221 1111111111111111 1223
Q ss_pred HHHHHHHhccCCCCCCCCCHH-HHHHH
Q 039322 680 SIMEVAFSCLNESPESRPTMK-VVTQQ 705 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~~-evl~~ 705 (708)
.+.+++.+||+.||++||++. ++.+|
T Consensus 222 ~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 222 EAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred HHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 577889999999999999997 77654
No 123
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.7e-37 Score=311.59 Aligned_cols=260 Identities=23% Similarity=0.340 Sum_probs=208.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|++|.||+|... +|+.||+|.++.... ......+.+.+|++++++++|++++++++++...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM-MDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccc-cchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 57899999999999999999765 789999998864221 2233467889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 515 YELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
|||+++|+|.+++.... ....+++.+++.++.|++.|++|||+. |++||||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 99999999999986432 234578999999999999999999999 99999999999999999999999999988654
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+.......++.+
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~-- 229 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEKCDYPPLP-- 229 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc------cHHHHHhhhhcCCCCCCC--
Confidence 433333445678899999999888899999999999999999999999853221 000111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.+++.+||+.+|++|||+.++++.++
T Consensus 230 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~ 263 (267)
T cd08224 230 ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263 (267)
T ss_pred hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHH
Confidence 1123446889999999999999999999998874
No 124
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.1e-38 Score=332.50 Aligned_cols=263 Identities=20% Similarity=0.259 Sum_probs=202.7
Q ss_pred HHHHHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 430 EIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 430 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
+.....++|++.+.||+|+||.||+|..+ +++.||+|++.+.. .......+.+.+|+.+++.++||||+++++++..+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE-MIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHH-hhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 34445689999999999999999999664 68899999986421 11122345678899999999999999999999999
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
+..++||||+++|+|.+++... .++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 9999999999999999998643 378889999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-ccccccccccccCccccccC----CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 039322 589 AKFLKPESS-NWTEFAGTYGYVAPELAYTM----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEIL 663 (708)
Q Consensus 589 a~~~~~~~~-~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 663 (708)
+........ ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+.
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~ 260 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------VGTYSKIM 260 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH--------HHHHHHHH
Confidence 986643322 22345789999999998653 377899999999999999999999974321 11112222
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhhC
Q 039322 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPES--RPTMKVVTQQVRI 708 (708)
Q Consensus 664 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~~ 708 (708)
.................+.+++.+|+..++.+ ||+++|+++|.++
T Consensus 261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~ 307 (371)
T cd05622 261 NHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 307 (371)
T ss_pred cCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence 21100000011122345778888999854443 7899999998653
No 125
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.7e-38 Score=332.22 Aligned_cols=254 Identities=22% Similarity=0.256 Sum_probs=201.2
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.+.+.||+|+||.||+|.. .+|+.||+|+++.... ......+.+.+|+.+++.++|+||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL-LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence 3688899999999999999965 4688999999875321 1123456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 80 MEYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred ECCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 99999999999997652 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCc-cccccccccccCccccc------cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC-
Q 039322 595 ESSN-WTEFAGTYGYVAPELAY------TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR- 666 (708)
Q Consensus 595 ~~~~-~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 666 (708)
.... .....|++.|+|||++. ...++.++|||||||++|||++|+.||...... .....+....
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~~~~~ 226 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA--------KTYNNIMNFQR 226 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH--------HHHHHHHcCCC
Confidence 3322 23356899999999986 455778999999999999999999999743211 1111111110
Q ss_pred -CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 667 -LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 667 -~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
...+. .......+.+++.+|++ +|++|||++++++|-
T Consensus 227 ~~~~~~--~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~ 264 (330)
T cd05601 227 FLKFPE--DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHP 264 (330)
T ss_pred ccCCCC--CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence 00000 01123357788899998 999999999999864
No 126
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.7e-38 Score=326.84 Aligned_cols=246 Identities=23% Similarity=0.318 Sum_probs=191.6
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHH-HHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVK-ALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|.. .+++.||+|++.+... ........+..|.. +++.++||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTI-LKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 3699999999999966 4688999999865211 11122344555554 5788999999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (321)
T cd05603 80 GGELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT 153 (321)
T ss_pred CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc
Confidence 99999888643 3478899999999999999999999 99999999999999999999999999987543333333
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~~~----~~~~ 221 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--------SQMYDNILHKPLQLPG----GKTV 221 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--------HHHHHHHhcCCCCCCC----CCCH
Confidence 455789999999999988899999999999999999999999864221 1112222222222111 1233
Q ss_pred HHHHHHHhccCCCCCCCCCHH----HHHHHh
Q 039322 680 SIMEVAFSCLNESPESRPTMK----VVTQQV 706 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~~----evl~~l 706 (708)
.+.+++.+|++.||++||++. |++++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~ 252 (321)
T cd05603 222 AACDLLVGLLHKDQRRRLGAKADFLEIKNHV 252 (321)
T ss_pred HHHHHHHHHccCCHhhcCCCCCCHHHHhCCC
Confidence 577899999999999999753 666554
No 127
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.4e-38 Score=327.46 Aligned_cols=240 Identities=23% Similarity=0.273 Sum_probs=187.8
Q ss_pred ceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHH-HHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVK-ALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|... +++.||+|++.+..... ......+..|.. +++.++|+||+++++++..++..++||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh-hhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 36999999999999654 57889999987521111 112234444444 5678899999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++.... .+.+..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~ 153 (325)
T cd05602 80 GGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT 153 (325)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc
Confidence 999999986543 377888999999999999999999 99999999999999999999999999997543333334
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+......... ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~~~----~~~~ 221 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--------AEMYDNILNKPLQLKP----NITN 221 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH--------HHHHHHHHhCCcCCCC----CCCH
Confidence 456789999999999998999999999999999999999999864221 1111222222211111 1233
Q ss_pred HHHHHHHhccCCCCCCCCCHH
Q 039322 680 SIMEVAFSCLNESPESRPTMK 700 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~~ 700 (708)
.+.+++.+|+++||.+||++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (325)
T cd05602 222 SARHLLEGLLQKDRTKRLGAK 242 (325)
T ss_pred HHHHHHHHHcccCHHHCCCCC
Confidence 578899999999999999876
No 128
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.4e-38 Score=337.16 Aligned_cols=254 Identities=19% Similarity=0.238 Sum_probs=197.0
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|++.+.||+|+||.||+|.. .+++.||||++.+... ......+.+.+|++++++++|+||+++++.+.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV-LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH-HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence 3688999999999999999965 4689999999865211 1112345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|..+..
T Consensus 80 ~E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 80 MDYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999996543 478899999999999999999999 999999999999999999999999999753210
Q ss_pred CC-------------------------------------------CccccccccccccCccccccCCCCcchhHHHHHHH
Q 039322 595 ES-------------------------------------------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVL 631 (708)
Q Consensus 595 ~~-------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~ 631 (708)
.. .......||+.|+|||++.+..++.++||||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 00 00112468999999999999889999999999999
Q ss_pred HHHHHhCCCCCCccccccccccccccccccccC--CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC---CHHHHHHHh
Q 039322 632 VLEAIKGKHPRDFLSLISSSSLNTDIALDEILD--PRLPPPSRSVQEKLISIMEVAFSCLNESPESRP---TMKVVTQQV 706 (708)
Q Consensus 632 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~~l 706 (708)
+|||++|+.||....... ....+.. .....+. .......+.+++.+|+ .+|++|+ ++.|+++|-
T Consensus 234 lyell~G~~Pf~~~~~~~--------~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~ 302 (376)
T cd05598 234 LYEMLVGQPPFLADTPAE--------TQLKVINWETTLHIPS--QAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHP 302 (376)
T ss_pred eeehhhCCCCCCCCCHHH--------HHHHHhccCccccCCC--CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCC
Confidence 999999999997433211 0011111 0111110 0112234667777876 5999999 999999874
Q ss_pred h
Q 039322 707 R 707 (708)
Q Consensus 707 ~ 707 (708)
+
T Consensus 303 ~ 303 (376)
T cd05598 303 F 303 (376)
T ss_pred C
Confidence 3
No 129
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.5e-37 Score=311.44 Aligned_cols=249 Identities=27% Similarity=0.477 Sum_probs=200.2
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
.+|++.+.||+|+||.||+|..+++..+|+|.+.... .....+.+|++++++++|+||+++++++...+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-----MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEE
Confidence 4688999999999999999988777889999986532 12356888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 79 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~ 153 (256)
T cd05059 79 EYMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD 153 (256)
T ss_pred ecCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccc
Confidence 9999999999997543 2579999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCcc-ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCCc
Q 039322 596 SSNW-TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RLPPPSR 672 (708)
Q Consensus 596 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 672 (708)
.... ....++..|+|||...+..++.++||||||+++|||++ |+.||+...... ....+... ....+
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~-- 223 (256)
T cd05059 154 QYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--------VVESVSAGYRLYRP-- 223 (256)
T ss_pred cccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--------HHHHHHcCCcCCCC--
Confidence 2111 11223457999999998889999999999999999999 899986432111 11111111 11111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
...+..+.+++.+||+.+|++|||+.|+++.|
T Consensus 224 --~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 224 --KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred --CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 11234688999999999999999999999986
No 130
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.2e-37 Score=316.86 Aligned_cols=255 Identities=20% Similarity=0.328 Sum_probs=202.6
Q ss_pred ccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
.+|++.+.||+|+||.||+|... +++.||+|.++... .......+.+|+.++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA---EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ 81 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence 46788899999999999999653 25789999987532 1233567889999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccc-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 039322 510 HSFLVYELLERGSLAAILSSDT-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 576 (708)
..++++||+.+++|.+++.... ....+++..+..++.|++.||+|+|++ |++||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~ 158 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVF 158 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEec
Confidence 9999999999999999985321 123478889999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccc
Q 039322 577 LEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSL 653 (708)
Q Consensus 577 ~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~ 653 (708)
+++.+||+|||+++........ .....+++.|+|||.+.++.++.++||||||+++|||++ |..||.....
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------ 232 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------ 232 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH------
Confidence 9999999999998865432221 123345679999999988889999999999999999998 8888763221
Q ss_pred ccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+.++...+.... .+..+.+++.+||+.+|++||++++|++.|+
T Consensus 233 --~~~~~~i~~~~~~~~~~~---~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 233 --QDVIEMIRNRQVLPCPDD---CPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred --HHHHHHHHcCCcCCCCCC---CCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 222233333332222122 2334788999999999999999999999885
No 131
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.6e-37 Score=321.22 Aligned_cols=250 Identities=24% Similarity=0.449 Sum_probs=198.6
Q ss_pred ccccccceeccccCccEEEEEeC-CCc----EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQ----VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.+|+..+.||+|+||.||+|.+. +++ .||+|+++... .....+++..|+.+++.++||||++++|++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence 57999999999999999999653 333 38999987421 223456788999999999999999999999765 5
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++++||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred ceeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccc
Confidence 679999999999999997543 3478999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC--C
Q 039322 591 FLKPESSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILD--P 665 (708)
Q Consensus 591 ~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 665 (708)
......... ....++..|+|||++.+..++.++||||||+++|||++ |+.||+...... ...+.. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---------~~~~~~~~~ 228 (316)
T cd05108 158 LLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---------ISSILEKGE 228 (316)
T ss_pred cccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---------HHHHHhCCC
Confidence 765433222 22234678999999999899999999999999999998 999987432111 011111 1
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.+.. ....+.+++.+||+.+|++||++.++++.+.
T Consensus 229 ~~~~~~~----~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 229 RLPQPPI----CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred CCCCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111 2235788999999999999999999998764
No 132
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.9e-37 Score=324.18 Aligned_cols=256 Identities=23% Similarity=0.375 Sum_probs=199.7
Q ss_pred hccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSH 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~ 507 (708)
.++|++.+.||+|+||.||+|... +++.||+|+++... .....+.+..|+++++++ +|+||+++++++..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA---TASEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC---CHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 357999999999999999999532 35789999987532 123456788899999999 79999999998865
Q ss_pred C-CeeEEEEEeccCCCHHHHhccccc------------------------------------------------------
Q 039322 508 A-RHSFLVYELLERGSLAAILSSDTA------------------------------------------------------ 532 (708)
Q Consensus 508 ~-~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------ 532 (708)
+ ...+++|||+++|+|.+++.....
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 4 568899999999999999854221
Q ss_pred ----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc--cccccccc
Q 039322 533 ----AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTY 606 (708)
Q Consensus 533 ----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~ 606 (708)
...+++..+.+++.||+.||+|||+. ||+||||||+||+++.++.++|+|||++..+...... .....++.
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 12579999999999999999999999 9999999999999999999999999999876433221 12334567
Q ss_pred cccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccccccccc-CCCCCCCCchhHHHHHHHHHH
Q 039322 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEIL-DPRLPPPSRSVQEKLISIMEV 684 (708)
Q Consensus 607 ~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l 684 (708)
.|+|||++.+..++.++|||||||++|||++ |..||...... ......+ .......+ .....++.++
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~~~l 308 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--------EEFCRRLKEGTRMRAP---EYATPEIYSI 308 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--------HHHHHHHhccCCCCCC---ccCCHHHHHH
Confidence 8999999999999999999999999999998 99998632110 0010111 11110000 1123458899
Q ss_pred HHhccCCCCCCCCCHHHHHHHhh
Q 039322 685 AFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 685 i~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+||+.+|++||++.|++++|+
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~ 331 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILG 331 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHH
Confidence 99999999999999999999985
No 133
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-37 Score=318.09 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=203.4
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|+..+.||+|++|.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++..++..++|
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC----cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 6788999999999999999964 468899999987532 23356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++... .+++.++..++.|++.|++|||+. |++||||||+||+++.++.++|+|||.+.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (296)
T ss_pred ecccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence 9999999999998643 378899999999999999999999 999999999999999999999999999886544
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........+++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ........+... ....
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-------~~~~~~~~~~~~--~~~~ 239 (296)
T cd06654 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-------ALYLIATNGTPE--LQNP 239 (296)
T ss_pred cccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-------hHHHHhcCCCCC--CCCc
Confidence 3333344568899999999988888999999999999999999999986432110 000011111110 0111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
......+.+++.+||.++|++|||++|++++-
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~ 271 (296)
T cd06654 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ 271 (296)
T ss_pred cccCHHHHHHHHHHCcCCcccCcCHHHHhhCh
Confidence 12334578899999999999999999999863
No 134
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.1e-37 Score=323.39 Aligned_cols=246 Identities=23% Similarity=0.312 Sum_probs=193.4
Q ss_pred ceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|..+ +|+.||+|.++..... .......+..|.+++... +||+|+++++++.+++..|+||||+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence 36999999999999664 6889999998753211 112345567778877754 89999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05620 80 GGDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA 153 (316)
T ss_pred CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce
Confidence 99999998654 3478999999999999999999999 99999999999999999999999999987543333334
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. . ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--------~~~~~~~~~~~~~~~~-~---~~~ 221 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--------DELFESIRVDTPHYPR-W---ITK 221 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCC-C---CCH
Confidence 456789999999999998999999999999999999999999974321 1111111111111111 1 223
Q ss_pred HHHHHHHhccCCCCCCCCCH-HHHHHHh
Q 039322 680 SIMEVAFSCLNESPESRPTM-KVVTQQV 706 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~-~evl~~l 706 (708)
++.+++.+||+.||++||++ +++.+|-
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~~~~~~h~ 249 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVVGNIRGHP 249 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHHcCC
Confidence 57789999999999999998 4676553
No 135
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.1e-37 Score=315.98 Aligned_cols=254 Identities=28% Similarity=0.475 Sum_probs=203.2
Q ss_pred ccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
.+|.+.+.||+|+||.||+|... ++..+++|.+... .....+.+.+|++++++++|+||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 57888999999999999999642 3456899998652 2344567899999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccc-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 039322 510 HSFLVYELLERGSLAAILSSDT-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 576 (708)
..++||||+++++|.+++.... ....+++..++.++.|++.|++|||++ +++||||||+||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~ 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVG 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc
Confidence 9999999999999999996543 123489999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccc
Q 039322 577 LEYEAHVADFGIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSL 653 (708)
Q Consensus 577 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~ 653 (708)
.++.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------ 231 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN------ 231 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------
Confidence 999999999999975543221 1223446788999999998889999999999999999999 9999863221
Q ss_pred ccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+.......... ..+..+.+++.+||+.||++|||+++|++.|+
T Consensus 232 --~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 232 --TEVIECITQGRVLERPR---VCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred --HHHHHHHhCCCCCCCCc---cCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 11111122222211111 12345889999999999999999999999874
No 136
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.2e-37 Score=312.11 Aligned_cols=257 Identities=22% Similarity=0.322 Sum_probs=203.9
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcc-hhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCD-QIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
++|+..+.||+|++|.||.|.. .+++.||+|.+....... .....+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5688999999999999999965 468999999987532211 12234678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++....
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999986543 378899999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCcc---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 594 PESSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 594 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
...... ....++..|+|||++.+..++.++||||+|+++|||++|+.||....... ............
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~- 226 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA--------AIFKIATQPTNP- 226 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH--------HHHHHhccCCCC-
Confidence 322111 23457789999999999889999999999999999999999986322110 000111110000
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.........+.+++.+||+.+|++|||+.|++++.++
T Consensus 227 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 227 -QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred -CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 0011223357889999999999999999999998653
No 137
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.9e-37 Score=314.43 Aligned_cols=248 Identities=23% Similarity=0.289 Sum_probs=192.8
Q ss_pred eccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCC
Q 039322 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGS 522 (708)
Q Consensus 444 ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~ 522 (708)
||+|+||.||++.. .+|+.||+|.+...... .......+..|++++++++||||+++++++..+...++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLK-KKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhh-cchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 69999999999965 46899999998642111 11223456679999999999999999999999999999999999999
Q ss_pred HHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 039322 523 LAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602 (708)
Q Consensus 523 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 602 (708)
|.+++.... ...+++..+..++.|++.|++|||+. |++||||||+||+++.++.++|+|||++...... ......
T Consensus 80 L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~-~~~~~~ 154 (277)
T cd05607 80 LKYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG-KTITQR 154 (277)
T ss_pred HHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-ceeecc
Confidence 998886443 23478999999999999999999999 9999999999999999999999999999866432 222345
Q ss_pred cccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHH
Q 039322 603 AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIM 682 (708)
Q Consensus 603 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 682 (708)
.++..|+|||++.+..++.++||||+||++|||++|+.||...... ................... .....++.
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 227 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK----VAKEELKRRTLEDEVKFEH---QNFTEESK 227 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch----hhHHHHHHHhhcccccccc---ccCCHHHH
Confidence 6889999999999888999999999999999999999998632110 0011111112222221111 11234578
Q ss_pred HHHHhccCCCCCCCCCHHHHHH
Q 039322 683 EVAFSCLNESPESRPTMKVVTQ 704 (708)
Q Consensus 683 ~li~~cl~~dP~~RPs~~evl~ 704 (708)
+++.+||++||++||+++|+++
T Consensus 228 ~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 228 DICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred HHHHHHhccCHhhCCCCccchh
Confidence 9999999999999999966553
No 138
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.8e-37 Score=308.87 Aligned_cols=255 Identities=23% Similarity=0.315 Sum_probs=208.3
Q ss_pred cccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|+..+.||+|+||.||.++ ..+++.+++|.+.... ........+.+|++++++++|+||+++++++.+.+..+++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTR--LSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecc--cchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEE
Confidence 47888999999999999995 4568899999986432 12344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++|+|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 79 EYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred EecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 9999999999997653 24579999999999999999999998 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
........+++.|+|||+..+..++.++||||+|+++|||++|+.||+.... ......+......+.. .
T Consensus 155 ~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~---~ 223 (256)
T cd08221 155 YSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--------LNLVVKIVQGNYTPVV---S 223 (256)
T ss_pred cccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCCc---c
Confidence 4334456688999999999888889999999999999999999999863221 1122222222222221 2
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.....+.+++.+||+.+|++||+++|++++..+
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 224 VYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 223457889999999999999999999998753
No 139
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=7.1e-38 Score=326.52 Aligned_cols=245 Identities=23% Similarity=0.321 Sum_probs=192.2
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHH-HHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVK-ALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|.. .+|+.||+|++.+.... .......+..|.. +++.++||||+++++++..++..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL-NRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC
Confidence 3589999999999965 46899999998753211 1223345555555 4677899999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++... ..+++..+..++.||+.||+|||+. |++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 153 (325)
T cd05604 80 GGELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT 153 (325)
T ss_pred CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc
Confidence 99999988643 3488999999999999999999999 99999999999999999999999999987543333334
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+........+. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--------~~~~~~~~~~~~~~~~~----~~~ 221 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV--------AEMYDNILHKPLVLRPG----ASL 221 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH--------HHHHHHHHcCCccCCCC----CCH
Confidence 456789999999999998899999999999999999999999874321 11112222222211111 223
Q ss_pred HHHHHHHhccCCCCCCCCCHH----HHHHH
Q 039322 680 SIMEVAFSCLNESPESRPTMK----VVTQQ 705 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~~----evl~~ 705 (708)
.+.+++.+|++++|++||+++ ++++|
T Consensus 222 ~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h 251 (325)
T cd05604 222 TAWSILEELLEKDRQRRLGAKEDFLEIQEH 251 (325)
T ss_pred HHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence 477889999999999999875 55554
No 140
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.2e-38 Score=334.06 Aligned_cols=252 Identities=19% Similarity=0.255 Sum_probs=194.5
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
.|+..+.||+|+||.||+|.. .+++.||+|++.+.. .........+.+|++++++++|+||+++++++.+++..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKD-VLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHH-hhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 578899999999999999965 568899999987521 111233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 81 DYIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999999986543 478899999999999999999999 9999999999999999999999999997532100
Q ss_pred C-----------------------------------------------CccccccccccccCccccccCCCCcchhHHHH
Q 039322 596 S-----------------------------------------------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 628 (708)
Q Consensus 596 ~-----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvwsl 628 (708)
. .......||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 00112468999999999999899999999999
Q ss_pred HHHHHHHHhCCCCCCccccccccccccccccccccC--CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC---HHHHH
Q 039322 629 GVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD--PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPT---MKVVT 703 (708)
Q Consensus 629 G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl 703 (708)
||++|||++|+.||...... .....+.. .....+. ......+..+++.+++ .+|++|++ ++|++
T Consensus 235 Gvil~elltG~~Pf~~~~~~--------~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 303 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPL--------ETQMKVINWQTSLHIPP--QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIK 303 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHH--------HHHHHHHccCCCcCCCC--cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHh
Confidence 99999999999999743211 11111111 1111110 0111223556666765 59999997 99988
Q ss_pred HHh
Q 039322 704 QQV 706 (708)
Q Consensus 704 ~~l 706 (708)
+|-
T Consensus 304 ~hp 306 (382)
T cd05625 304 AHP 306 (382)
T ss_pred cCC
Confidence 763
No 141
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.6e-37 Score=323.27 Aligned_cols=250 Identities=22% Similarity=0.315 Sum_probs=197.7
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~lv 514 (708)
+|+..+.||+|+||.||+|.. .+|+.||+|++.+... ......+.+..|.+++..+. |++|+++.+++..++..++|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV-IQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence 467789999999999999965 4688999999875211 11223456778888888885 57888899999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++.++..++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 80 ~Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 80 MEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999999986543 489999999999999999999999 999999999999999999999999999875443
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+..
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~~~~~p~~-- 223 (323)
T cd05615 154 DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--------DELFQSIMEHNVSYPKS-- 223 (323)
T ss_pred CCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCcc--
Confidence 33333445689999999999988899999999999999999999999874321 12222222222221111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTM-----KVVTQQ 705 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 705 (708)
....+.+++.+|++++|++|++. +++.+|
T Consensus 224 --~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 224 --LSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred --CCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 12357789999999999999974 556554
No 142
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.6e-37 Score=310.18 Aligned_cols=251 Identities=22% Similarity=0.332 Sum_probs=203.8
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|++.+.||+|+||.||++... +++.||+|.++... .....+.+..|+.++++++|+||+++++++..++..++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK---SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc---chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEE
Confidence 4778899999999999999654 68899999986432 1234567888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++|+|.+++.... ...+++..++.++.|++.|++|||++ +++|+||+|+||++++++.++++|||.+......
T Consensus 78 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 78 EYCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred eeCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 9999999999886433 23478999999999999999999999 9999999999999999999999999999866544
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
........++..|+|||++.+..++.++|+||+|+++|+|++|+.||..... ......+......+.+.
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~--- 222 (255)
T cd08219 154 GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW--------KNLILKVCQGSYKPLPS--- 222 (255)
T ss_pred ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH--------HHHHHHHhcCCCCCCCc---
Confidence 3333456688999999999888899999999999999999999999873221 11111111222211111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.....+.+++.+||+.||++|||+.|++..
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 123357889999999999999999999875
No 143
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.3e-37 Score=315.30 Aligned_cols=257 Identities=21% Similarity=0.357 Sum_probs=202.2
Q ss_pred HhccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH 507 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~ 507 (708)
..++|++.+.||+|+||.||+|..+ .+..||+|.+.... .......+.+|+.++++++|+||+++++++..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK 80 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 4578999999999999999999543 24579999986532 22345568899999999999999999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhccccc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTA-------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE 580 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 580 (708)
.+..++||||+++|+|.+++..... ....++..+..++.|++.||+|||++ +++||||||+||+++.++.
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~ 157 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFT 157 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCc
Confidence 9999999999999999999965321 23457788999999999999999999 9999999999999999999
Q ss_pred EEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 039322 581 AHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI 657 (708)
Q Consensus 581 ~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~ 657 (708)
++|+|||+++........ .....++..|+|||.+.++.++.++|||||||++|||++ |..||..... ..
T Consensus 158 ~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--------~~ 229 (288)
T cd05061 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQ 229 (288)
T ss_pred EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--------HH
Confidence 999999998855432221 122344678999999988889999999999999999998 7888763211 11
Q ss_pred ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.+.+........ .....+.+++.+||+.||++|||+.++++.++
T Consensus 230 ~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 276 (288)
T cd05061 230 VLKFVMDGGYLDQPD---NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276 (288)
T ss_pred HHHHHHcCCCCCCCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 222222222211111 11246889999999999999999999998764
No 144
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.6e-37 Score=322.32 Aligned_cols=253 Identities=22% Similarity=0.300 Sum_probs=196.6
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|.. .+++.||+|++++... ......+.+..|+.++.++ +||+|+++++++...+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV-HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 3699999999999965 4678999999976321 1223456688899999888 69999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++.... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (327)
T cd05617 80 GGDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT 153 (327)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce
Confidence 999999886443 489999999999999999999999 99999999999999999999999999987543333333
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....|++.|+|||++.+..++.++||||||+++|||++|+.||+........ .........+.......+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~----~~~ 228 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM-NTEDYLFQVILEKPIRIPRF----LSV 228 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc-ccHHHHHHHHHhCCCCCCCC----CCH
Confidence 4567899999999999989999999999999999999999999632211000 00011111222222211111 123
Q ss_pred HHHHHHHhccCCCCCCCCC------HHHHHHHh
Q 039322 680 SIMEVAFSCLNESPESRPT------MKVVTQQV 706 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs------~~evl~~l 706 (708)
.+.+++.+|+++||++||+ ++++.+|-
T Consensus 229 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 229 KASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 4678999999999999998 46777663
No 145
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.8e-37 Score=343.71 Aligned_cols=258 Identities=26% Similarity=0.388 Sum_probs=200.0
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +|+.||+|+++.... ......+++.+|++++++++||||+++++++.+++..++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~-~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS-ENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc-cCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 57999999999999999999654 689999999976332 2223456799999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccc--------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 515 YELLERGSLAAILSSDT--------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
|||++||+|.+++.... .....++..++.++.||++||+|||++ ||+||||||+||+++.++.++|+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEec
Confidence 99999999999986421 123356778899999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCC------------------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 039322 587 GIAKFLKPESS------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLI 648 (708)
Q Consensus 587 g~a~~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~ 648 (708)
|++........ ......||+.|+|||++.+..++.++||||+||++|||+||+.||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 99986521110 011246899999999999989999999999999999999999998642211
Q ss_pred cccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHh
Q 039322 649 SSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRP-TMKVVTQQV 706 (708)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~l 706 (708)
.. ........+.... .....+..+.+++.+|++.||++|| +++++.+.|
T Consensus 238 ki------~~~~~i~~P~~~~---p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~L 287 (932)
T PRK13184 238 KI------SYRDVILSPIEVA---PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDL 287 (932)
T ss_pred hh------hhhhhccChhhcc---ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 00 0000111111000 1112334578899999999999997 556665544
No 146
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.8e-37 Score=309.54 Aligned_cols=252 Identities=21% Similarity=0.387 Sum_probs=202.1
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|+||.||+|..++++.||+|.+.... ...+.+.+|+.++++++|+||+++++++. .+..+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-----MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII 78 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-----CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence 46789999999999999999988889999999987532 23457889999999999999999999874 4568999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++..... ..+++.++..++.|++.||+|||+. |++||||+|+||+++.++.++|+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 79 TEYMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EEcCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 999999999999865442 4589999999999999999999998 999999999999999999999999999976653
Q ss_pred CCC-ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 595 ESS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 595 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
... ......++..|+|||++.+..++.++||||||+++||+++ |+.||...... .....+......+...
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 226 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--------EVIQNLERGYRMPRPD 226 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHHcCCCCCCCC
Confidence 221 1123345678999999988889999999999999999999 99998633211 1111111111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.++.+++.+||+.+|++|||++++.+.|+
T Consensus 227 ---~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 227 ---NCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred ---CCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 12335889999999999999999999999875
No 147
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=8.4e-37 Score=306.87 Aligned_cols=246 Identities=24% Similarity=0.396 Sum_probs=194.9
Q ss_pred eeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCC
Q 039322 443 CIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERG 521 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g 521 (708)
.||+|+||.||+|.. .+++.||+|.+.... .......+.+|++++++++||||+++++++...+..++||||++++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 589999999999965 478899999886532 2234567899999999999999999999999999999999999999
Q ss_pred CHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc--
Q 039322 522 SLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW-- 599 (708)
Q Consensus 522 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-- 599 (708)
+|.+++.... ..+++..++.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++..........
T Consensus 79 ~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 79 DFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred cHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9999996543 3478999999999999999999999 99999999999999999999999999987544221111
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCchhHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKL 678 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (708)
.....+..|+|||.+.++.++.++||||||+++|||++ |..||...... .....+........ ....+
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~ 222 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------QTREAIEQGVRLPC---PELCP 222 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------HHHHHHHcCCCCCC---cccCC
Confidence 11223467999999998889999999999999999998 88888632211 00011101000011 11123
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 679 ISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 679 ~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.+++.+||+.+|++|||+.++.+.|+
T Consensus 223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 223 DAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 46888999999999999999999999886
No 148
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=6e-38 Score=316.83 Aligned_cols=258 Identities=30% Similarity=0.473 Sum_probs=203.0
Q ss_pred ccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|++.+.||+|+||+||++... +++.||+|.+.... ...........|+.++++++||||+++++++.+.+..++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSE--IEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTT--HHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccc--ccccccchhhhhhhcccccccccccccccccccccccccccc
Confidence 677899999999999999665 56789999998642 122223344569999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+++++|.+++.. ...+++..++.++.|+++||++||+. +++|+||||+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~ 152 (260)
T PF00069_consen 79 YCPGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN 152 (260)
T ss_dssp EETTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT
T ss_pred ccccccccccccc---cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999999972 24479999999999999999999999 99999999999999999999999999998653334
Q ss_pred CccccccccccccCccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 597 SNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
.......++..|+|||+.. +..++.++||||+|+++|+|++|..||...... ......................
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD-----DQLEIIEKILKRPLPSSSQQSR 227 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-----HHHHHHHHHHHTHHHHHTTSHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccch-----hhhhhhhhcccccccccccccc
Confidence 4455667899999999988 788999999999999999999999998743110 0011111111100000000000
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.....+.+++.+||+.||++||++.+++++-++
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred hhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 012568999999999999999999999987653
No 149
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=8.2e-37 Score=311.44 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=200.6
Q ss_pred HhccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH 507 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~ 507 (708)
..++|.+.+.||+|++|.||+|.+. .+..||+|.+.... .......+..|+.++++++|+||+++++++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC---SEQDESDFLMEALIMSKFNHQNIVRLIGVSFE 80 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence 3477999999999999999999664 35679999886422 12334678899999999999999999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhccccc----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC---c
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTA----AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY---E 580 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~ 580 (708)
.+..++||||+++++|.+++..... ...+++..+.+++.||+.|++|||++ +++||||||+||+++.++ .
T Consensus 81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcc
Confidence 9999999999999999999975532 12489999999999999999999999 999999999999998754 5
Q ss_pred EEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 039322 581 AHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI 657 (708)
Q Consensus 581 ~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~ 657 (708)
+||+|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||+..... .
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--------~ 229 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--------E 229 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------H
Confidence 999999999865322211 112233568999999998889999999999999999997 99998742211 1
Q ss_pred ccccccC-CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILD-PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.. .+...+. ..+..+.+++.+||+.+|++|||+.+|+++|+
T Consensus 230 ~~~~~~~~~~~~~~~----~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 230 VMEFVTGGGRLDPPK----GCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHcCCcCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111111 1111111 12345788999999999999999999999985
No 150
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=9.7e-37 Score=307.29 Aligned_cols=245 Identities=26% Similarity=0.389 Sum_probs=193.5
Q ss_pred eeccccCccEEEEEe---CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 443 CIGNGGHGSVYRAEL---PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
.||+|+||.||+|.+ .++..+|+|+++... ......+++..|+.+++.++|+||+++++++. .+..++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN--NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC--CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCC
Confidence 589999999999954 357889999987532 22334677899999999999999999999885 456789999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++.... .+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||++..........
T Consensus 79 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 79 LGPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 999999996543 488999999999999999999999 99999999999999999999999999998664333221
Q ss_pred ---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 600 ---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 600 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
....++..|+|||.+....++.++||||||+++|||++ |+.||...... .....+......+.+.
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~i~~~~~~~~~~--- 221 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--------EVTQMIESGERMECPQ--- 221 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHCCCCCCCCC---
Confidence 12233578999999888888999999999999999998 99998743221 1111111111111111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+..+.++|.+||+.||++||++++|.+.|+
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 12345789999999999999999999999875
No 151
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.5e-37 Score=312.53 Aligned_cols=252 Identities=26% Similarity=0.376 Sum_probs=200.3
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.+.+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+.+++.++||||+++++++..++..++|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP----GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 5788899999999999999964 568899999987531 23345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++...+ .+++.+++.++.|++.|++|||+. |++|+||||+||+++.++.++|+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 85 MEFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred EeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 99999999999986543 488999999999999999999999 999999999999999999999999999876544
Q ss_pred CCCccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC-
Q 039322 595 ESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP- 670 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 670 (708)
.........|+..|+|||++. ...++.++||||+||++|+|++|+.||........ ..........++
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~--------~~~~~~~~~~~~~ 230 (267)
T cd06645 159 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--------LFLMTKSNFQPPK 230 (267)
T ss_pred cccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh--------HHhhhccCCCCCc
Confidence 333334557899999999874 45578899999999999999999999753221100 000000011000
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.......+..+.+++.+||+.+|++||+++++++|
T Consensus 231 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 231 LKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred ccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 00011123357889999999999999999999876
No 152
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.2e-36 Score=306.26 Aligned_cols=245 Identities=24% Similarity=0.366 Sum_probs=192.1
Q ss_pred eeccccCccEEEEEeC---CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 443 CIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
.||+|+||.||+|.+. .+..||+|++.... .....+.+.+|+.++++++|+||+++++++.. +..++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN---EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc---ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 3899999999999653 35579999987532 22345679999999999999999999998854 57899999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++.... ..+++..+++++.|++.|++|||++ |++||||||+||+++.++.+||+|||++..........
T Consensus 78 ~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 78 GGPLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred CCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccce
Confidence 999999986433 3589999999999999999999999 99999999999999999999999999998654332221
Q ss_pred ---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 600 ---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 600 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
....++..|+|||.+.+..++.++||||||+++||+++ |+.||...... .....+........+ .
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~---~ 221 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------EVMSFIEQGKRLDCP---A 221 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCCCCCCC---C
Confidence 11223578999999888889999999999999999996 99998743221 111111111111111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....++.+++.+||..+|++||++.+|.+.|+
T Consensus 222 ~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~ 253 (257)
T cd05115 222 ECPPEMYALMKDCWIYKWEDRPNFAKVEERMR 253 (257)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 12345788999999999999999999999886
No 153
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.3e-37 Score=319.47 Aligned_cols=263 Identities=17% Similarity=0.268 Sum_probs=200.1
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.+.+.||+|+||.||+|..+ +++.||+|.++.... ......+.+|++++++++||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE---EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc---CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 67899999999999999999654 678899999875321 12234577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++ +|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 83 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 156 (309)
T cd07872 83 FEYLDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSV 156 (309)
T ss_pred EeCCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence 999975 8888876443 3478899999999999999999999 999999999999999999999999999976544
Q ss_pred CCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc----------------ccccc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS----------------LNTDI 657 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~----------------~~~~~ 657 (708)
.........++..|+|||.+.+ ..++.++||||+|+++|||+||+.||.......... .....
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 157 PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred CccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 3333344567899999998765 457889999999999999999999996432110000 00000
Q ss_pred ccccccCCCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+...+.. ........++.+++.+|++.||++|||++|+++|-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 288 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChh
Confidence 00000001100000 001112345789999999999999999999998754
No 154
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.1e-37 Score=308.70 Aligned_cols=252 Identities=28% Similarity=0.421 Sum_probs=205.8
Q ss_pred ccccccceeccccCccEEEEEeCC-CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|+..+.||+|+||.||+|...+ ++.||+|.+... ...+++.+|++++++++|+||+++++++..++..+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~------~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE------EDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH------HHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence 678999999999999999997654 789999998652 1267899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+.+++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 77 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 77 MEYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred EecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 99999999999986433 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........++..|+|||++.+..++.++||||||+++|+|++|+.||......... ..... .........
T Consensus 152 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~--------~~~~~-~~~~~~~~~ 222 (256)
T cd06612 152 TMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI--------FMIPN-KPPPTLSDP 222 (256)
T ss_pred CccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh--------hhhcc-CCCCCCCch
Confidence 433334456788999999998888999999999999999999999998743221100 00000 001111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+.+++.+||+.||++|||++|++++=+
T Consensus 223 ~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~ 255 (256)
T cd06612 223 EKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPF 255 (256)
T ss_pred hhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCC
Confidence 122346889999999999999999999998754
No 155
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.5e-37 Score=308.33 Aligned_cols=252 Identities=25% Similarity=0.433 Sum_probs=201.8
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|+||.||+|..+++..||+|.++... ...+.+.+|+.++++++|++++++++++. .+..+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv 78 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-----MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIV 78 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-----CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEE
Confidence 36789999999999999999988888889999987532 12456899999999999999999999885 4567899
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 79 TEYMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIED 154 (260)
T ss_pred EEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence 99999999999997543 24579999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 595 ESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 595 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.... .....++..|+|||...+..++.++||||||+++|+|++ |..||..... ......+......+.+
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~- 225 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--------REVLEQVERGYRMPCP- 225 (260)
T ss_pred cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCC-
Confidence 3221 122335668999999988889999999999999999999 8899864221 1111112111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||+++|++|||+.++.+.|+
T Consensus 226 --~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 226 --QDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred --CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 122346889999999999999999999998875
No 156
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=7.5e-37 Score=311.91 Aligned_cols=256 Identities=23% Similarity=0.360 Sum_probs=203.8
Q ss_pred hccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
.++|.+.+.||+|+||.||+|... .+..||+|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence 367889999999999999999653 24689999986532 234456788999999999999999999999999
Q ss_pred CeeEEEEEeccCCCHHHHhccccc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 039322 509 RHSFLVYELLERGSLAAILSSDTA-------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA 581 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 581 (708)
+..++||||+++|+|.+++..... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCE
Confidence 999999999999999999965432 12468899999999999999999998 99999999999999999999
Q ss_pred EEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccc
Q 039322 582 HVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIA 658 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 658 (708)
||+|||+++........ .....++..|+|||.+.++.++.++||||||+++||+++ |+.||..... ...
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--------~~~ 230 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--------EEV 230 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--------HHH
Confidence 99999999765433221 123346788999999988889999999999999999998 9999863221 111
Q ss_pred cccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+..........+... +..+.+++.+||+.+|++|||+.++++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 231 LKFVIDGGHLDLPENC---PDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHhcCCCCCCCCCC---CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1111122111111111 346889999999999999999999999874
No 157
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.9e-37 Score=314.80 Aligned_cols=266 Identities=24% Similarity=0.378 Sum_probs=205.4
Q ss_pred chHHHHHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEE
Q 039322 426 LVYDEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYG 503 (708)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~ 503 (708)
..++++..+.++|++.+.||+|+||.||+|.. .+++.+|+|.+.... .....+..|+.+++++ +|+||+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~ 82 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYG 82 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeee
Confidence 34556667789999999999999999999955 468899999876421 1235677899999999 6999999999
Q ss_pred EEe-----eCCeeEEEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 039322 504 FCS-----HARHSFLVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 504 ~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 577 (708)
++. .++..++||||+++++|.+++.... ....+++..+..++.|++.|+.|||+. +++||||||+||+++.
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~ 159 (286)
T cd06638 83 MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTT 159 (286)
T ss_pred eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECC
Confidence 884 3456899999999999999875322 234578999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccccccCCCCCccccccccccccCcccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc
Q 039322 578 EYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS 652 (708)
Q Consensus 578 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~ 652 (708)
++.+||+|||++..............|+..|+|||++.. ..++.++||||+|+++|||++|+.||.........
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~- 238 (286)
T cd06638 160 EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL- 238 (286)
T ss_pred CCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH-
Confidence 999999999999876543333344568899999998753 44788999999999999999999998643211100
Q ss_pred cccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
........+....+ ......+.+++.+||+.||++|||+.|++++..+
T Consensus 239 ----~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 239 ----FKIPRNPPPTLHQP----ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred ----hhccccCCCcccCC----CCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 00000000111111 1112358889999999999999999999998764
No 158
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=7.4e-37 Score=310.27 Aligned_cols=260 Identities=23% Similarity=0.311 Sum_probs=201.0
Q ss_pred HHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
.+++.+.....||+|+||.||+|.. .+++.||+|.+... .....+.+.+|++++++++|+||+++++++..++..
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER----DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC----CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 3455666667899999999999964 46788999988653 223456789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEeeccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL-EYEAHVADFGIAK 590 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~a~ 590 (708)
++|+||+++++|.+++.........++..+..++.|++.|++|||+. +++||||||+||+++. ++.++|+|||.+.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999999997543222237888999999999999999999 9999999999999976 6799999999997
Q ss_pred ccCCCCCccccccccccccCccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
.............++..|+|||++.+.. ++.++||||+|+++|+|++|+.||........ ...........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~ 231 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA------AMFKVGMFKIHP 231 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh------hHhhhhhhccCC
Confidence 6644333333456789999999986643 77899999999999999999999863221000 000000000111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
. ........+.+++.+||+.+|++|||+.|++++-+|
T Consensus 232 ~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 232 E---IPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred C---CCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 0 011223457889999999999999999999988553
No 159
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9.7e-37 Score=308.08 Aligned_cols=252 Identities=25% Similarity=0.418 Sum_probs=201.2
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|+||.||+|...++..||+|.++... ...+.+.+|++++++++|+||+++++++.. +..++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv 78 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 78 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-----cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEE
Confidence 36799999999999999999987777789999987522 124578899999999999999999998754 567999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 79 TEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 154 (262)
T ss_pred EEcCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccc
Confidence 99999999999997543 23478999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 595 ESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 595 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.... .....++..|+|||+..+..++.++||||||+++|||+| |+.||..... .............+
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~--------~~~~~~~~~~~~~~--- 223 (262)
T cd05071 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYRMP--- 223 (262)
T ss_pred cccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh--------HHHHHHHhcCCCCC---
Confidence 3322 122345678999999988889999999999999999999 8888863221 11111111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+..+.+++.+|+++||++||+++++++.|+
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 11223456889999999999999999999999875
No 160
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.8e-37 Score=314.22 Aligned_cols=257 Identities=25% Similarity=0.392 Sum_probs=200.9
Q ss_pred HHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeC--
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHA-- 508 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~-- 508 (708)
.+.+.|++.+.||+|+||.||+|.. .+++.||+|.+.... .....+..|+.+++++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 77 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC
Confidence 3567889999999999999999965 468899999986521 2345678899999998 699999999998753
Q ss_pred ----CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEe
Q 039322 509 ----RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVA 584 (708)
Q Consensus 509 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 584 (708)
...++||||+.+|+|.+++.... ...+++..+..++.|++.|++|||++ +++|+||+|+||+++.++.++|+
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~ 153 (272)
T cd06637 78 PGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 153 (272)
T ss_pred CCCCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEc
Confidence 46899999999999999987543 24578999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCccccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 039322 585 DFGIAKFLKPESSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659 (708)
Q Consensus 585 Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 659 (708)
|||++..............|+..|+|||++. ...++.++||||+||++|||++|+.||.......... ..
T Consensus 154 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~-----~~ 228 (272)
T cd06637 154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-----LI 228 (272)
T ss_pred cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-----HH
Confidence 9999986543333344567889999999876 3357789999999999999999999986322111000 00
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.......... ...+..+.+++.+||+.+|.+|||++|++++=++
T Consensus 229 ~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 229 PRNPAPRLKS-----KKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred hcCCCCCCCC-----CCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 0000011111 1122357889999999999999999999987543
No 161
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=8.9e-37 Score=311.59 Aligned_cols=254 Identities=25% Similarity=0.441 Sum_probs=201.3
Q ss_pred ccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
.+|...+.||+|+||.||+|... ++..+|+|.+... .....+.+.+|+++++.++|+||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC----CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 57888999999999999999532 3567999987652 2344568999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhccccc------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 039322 510 HSFLVYELLERGSLAAILSSDTA------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 577 (708)
..+++|||+++|+|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQ 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcC
Confidence 99999999999999999975432 13478999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccc
Q 039322 578 EYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLN 654 (708)
Q Consensus 578 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~ 654 (708)
++.+||+|||++......... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------- 230 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN------- 230 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH-------
Confidence 999999999999755432211 122334678999999988889999999999999999998 8999853221
Q ss_pred cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...............+. ..+..+.+++.+||+.||++||+++||++.|+
T Consensus 231 -~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 231 -TEAIECITQGRELERPR---TCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -HHHHHHHHcCccCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11111111111111111 12235789999999999999999999999875
No 162
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.5e-37 Score=315.05 Aligned_cols=257 Identities=22% Similarity=0.375 Sum_probs=202.7
Q ss_pred HhccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEe
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCS 506 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~ 506 (708)
..++|+..+.||+|+||.||+|... ....+|+|.+.... .......+.+|+++++++ +|+||+++++++.
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 3467899999999999999999653 23679999987532 223456788999999999 7999999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhccc-------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCe
Q 039322 507 HARHSFLVYELLERGSLAAILSSD-------------TAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNL 573 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Ni 573 (708)
.++..+++|||+++|+|.+++... .....+++..++.++.|++.|++|||+. +++||||||+||
T Consensus 87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Ni 163 (293)
T cd05053 87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNV 163 (293)
T ss_pred CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeE
Confidence 999999999999999999999643 2235689999999999999999999998 999999999999
Q ss_pred eeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccc
Q 039322 574 LLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISS 650 (708)
Q Consensus 574 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~ 650 (708)
+++.++.+||+|||+++.+...... .....++..|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-- 241 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-- 241 (293)
T ss_pred EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH--
Confidence 9999999999999999866433221 112234578999999988889999999999999999997 99998632211
Q ss_pred cccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 651 SSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..............+. .....+.+++.+||+.||++|||+.|+++.|.
T Consensus 242 ------~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~ 289 (293)
T cd05053 242 ------ELFKLLKEGYRMEKPQ---NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLD 289 (293)
T ss_pred ------HHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcccCcccCcCHHHHHHHHH
Confidence 1111111111111111 12335889999999999999999999999874
No 163
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.4e-36 Score=308.04 Aligned_cols=253 Identities=23% Similarity=0.404 Sum_probs=201.4
Q ss_pred ccccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
.+|++.+.||+|+||.||+|... .+..+|+|.++... .....+.+..|+.++++++||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 57889999999999999999653 23479999987532 123456889999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 99999999999999997543 3579999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcc---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 039322 592 LKPESSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 592 ~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
........ ....++..|+|||++.+..++.++||||||+++||+++ |+.||...... .....+.+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~~~ 227 (267)
T cd05066 156 LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--------DVIKAIEEGYR 227 (267)
T ss_pred cccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--------HHHHHHhCCCc
Confidence 65432221 11223568999999998889999999999999999886 99998643211 11111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.. ...+..+.+++.+||+++|++||++.++++.|.
T Consensus 228 ~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 264 (267)
T cd05066 228 LPAP---MDCPAALHQLMLDCWQKDRNERPKFEQIVSILD 264 (267)
T ss_pred CCCC---CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHH
Confidence 1111 112345789999999999999999999998874
No 164
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.9e-37 Score=315.76 Aligned_cols=252 Identities=26% Similarity=0.402 Sum_probs=203.6
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|+..+.||.|++|.||+|.. .+++.||+|.+... .....+.+.+|+++++.++|+|++++++++..++..++|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ----KQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc----cCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 5689999999999999999954 57899999998653 223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+++++|.+++... .+++.++..++.|++.|++|||+. |++||||+|+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 95 MEYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EEecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 9999999999998643 379999999999999999999999 999999999999999999999999999886654
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ....+..... +.....
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~--------~~~~~~~~~~-~~~~~~ 238 (296)
T cd06655 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--------ALYLIATNGT-PELQNP 238 (296)
T ss_pred ccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhcCC-cccCCc
Confidence 4333344568889999999988889999999999999999999999987432110 0000100000 000011
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+.+++.+||..||++||++++++++=+
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~ 271 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPF 271 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 122335788999999999999999999998643
No 165
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4e-37 Score=314.71 Aligned_cols=257 Identities=20% Similarity=0.258 Sum_probs=201.0
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... ........+..|+.++++++|++++++++.+...+..++||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-KKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhc-cchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEE
Confidence 366778899999999999955 4688999999865321 11223456778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 80 e~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 80 TLMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred EecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 9999999999985433 23588999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
. ......|+..|+|||++.+..++.++||||+|+++|+|++|+.||....... ............... ...
T Consensus 156 ~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-----~~~~~~~~~~~~~~~---~~~ 226 (285)
T cd05630 156 Q-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-----KREEVERLVKEVQEE---YSE 226 (285)
T ss_pred c-cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-----hHHHHHhhhhhhhhh---cCc
Confidence 2 2234578999999999998889999999999999999999999997421100 000111111100000 001
Q ss_pred HHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 039322 676 EKLISIMEVAFSCLNESPESRPT-----MKVVTQQVR 707 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~ 707 (708)
.....+.+++.+||+.||++||| ++|+++|-+
T Consensus 227 ~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 227 KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence 12335788999999999999999 899988754
No 166
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.3e-36 Score=310.10 Aligned_cols=254 Identities=23% Similarity=0.348 Sum_probs=199.9
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|.. .+++.||+|.+.... ......++..|++++++++||||+++++++..++..++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 77 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI---TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISIC 77 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC---ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEE
Confidence 3678889999999999999964 578899999986532 223456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|..+. .+++..+..++.|++.|++|||+. |++|+||||+||+++.++.++|+|||++.....
T Consensus 78 ~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~ 147 (279)
T cd06619 78 TEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN 147 (279)
T ss_pred EecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence 9999999997652 367888999999999999999999 999999999999999999999999999976543
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
. ......++..|+|||++.+..++.++||||||+++|+|++|+.||......... .........+.++..+.. ..
T Consensus 148 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~ 222 (279)
T cd06619 148 S--IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS-LMPLQLLQCIVDEDPPVL--PV 222 (279)
T ss_pred c--cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc-cchHHHHHHHhccCCCCC--CC
Confidence 2 223457889999999999888999999999999999999999998642211100 000011111111111110 01
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+.+++.+||+.+|++||+++|++++-+
T Consensus 223 ~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~ 255 (279)
T cd06619 223 GQFSEKFVHFITQCMRKQPKERPAPENLMDHPF 255 (279)
T ss_pred CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence 112335789999999999999999999998764
No 167
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.2e-37 Score=314.01 Aligned_cols=251 Identities=24% Similarity=0.368 Sum_probs=203.6
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|++.+.||+|++|.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++..++..++|
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 7899999999999999999965 578999999986532 23356688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++... .+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 95 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred ecccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 9999999999998643 378899999999999999999999 999999999999999999999999999986654
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........+++.|+|||...+..++.++||||+|+++|+|++|+.||....... ........+.. .....
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~-------~~~~~~~~~~~--~~~~~ 238 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGTP--ELQNP 238 (297)
T ss_pred CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch-------heeeeccCCCC--CCCCc
Confidence 4433344568889999999988889999999999999999999999986322110 00000011110 10111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
......+.+++.+||+.+|++||++++++++=
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (297)
T cd06656 239 ERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP 270 (297)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 12234577899999999999999999999864
No 168
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.7e-37 Score=320.11 Aligned_cols=196 Identities=25% Similarity=0.393 Sum_probs=172.0
Q ss_pred ccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-C-----CceeeEEEEEeeC
Q 039322 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-H-----RNIVKFYGFCSHA 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~~iv~l~~~~~~~ 508 (708)
.+|.+.+.||+|+||.|.+| +.++++.||||+++.. ..-..+...|+.+|..++ | -|+|+++++|...
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence 38899999999999999999 5567999999999863 233456677999999996 4 4899999999999
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC--CcEEEeec
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE--YEAHVADF 586 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~--~~~kl~Df 586 (708)
++.|||+|.+.. +|.++++.+.. ..++...++.++.||+.||.+||+. +|||+||||+|||+.+. ..+||+||
T Consensus 261 ~HlciVfELL~~-NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDF 335 (586)
T KOG0667|consen 261 NHLCIVFELLST-NLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDF 335 (586)
T ss_pred cceeeeehhhhh-hHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEec
Confidence 999999999966 99999988775 4489999999999999999999999 99999999999999654 36999999
Q ss_pred ccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDF 644 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~ 644 (708)
|.|++....-. ....+..|+|||++.+.+|+.+.||||||||++||++|.+-|..
T Consensus 336 GSSc~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 336 GSSCFESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred ccccccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 99997654322 55678899999999999999999999999999999999887764
No 169
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.8e-36 Score=305.82 Aligned_cols=251 Identities=24% Similarity=0.408 Sum_probs=200.3
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
++|++.+.||+|++|.||+|...++..+|+|.+.... ...+.+.+|++++++++|+|++++++++. .+..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence 5788999999999999999988777789999876521 22456888999999999999999999875 45678999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++|+|.+++.... ...+++..+..++.|++.||+|||+. |++|+||+|+||++++++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 80 EFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 9999999999997543 24478999999999999999999999 9999999999999999999999999999765433
Q ss_pred CCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 596 SSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 596 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
... .....++..|+|||...+..++.++||||||+++|||+| |+.||..... ......+......+.+
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~-- 225 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN--------REVLEQVERGYRMPCP-- 225 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCC--
Confidence 221 122345678999999988889999999999999999999 8999864221 1111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||++||++||++++|++.|+
T Consensus 226 -~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 226 -QGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred -cccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 123346889999999999999999999999875
No 170
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9.1e-37 Score=314.47 Aligned_cols=262 Identities=23% Similarity=0.347 Sum_probs=201.7
Q ss_pred hccccccceeccccCccEEEEEeCC-----------------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPS-----------------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~ 497 (708)
..+|++.+.||+|+||.||+|...+ +..||+|.+.... .....+.+.+|++++++++|+|
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA---SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhcCCCC
Confidence 3689999999999999999986532 2458999987642 2245678899999999999999
Q ss_pred eeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccc--------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCC
Q 039322 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDT--------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDIS 569 (708)
Q Consensus 498 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 569 (708)
|+++++++..++..+++|||+++++|.+++.... ....+++..++.++.|++.||+|||+. +++|||||
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlk 157 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLA 157 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccc
Confidence 9999999999999999999999999999996543 122589999999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCcc
Q 039322 570 SKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK--GKHPRDFL 645 (708)
Q Consensus 570 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt--g~~p~~~~ 645 (708)
|+||+++.++.++|+|||+++........ .....++..|+|||++.++.++.++||||||+++|||++ |..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 158 TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred hhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 99999999999999999998765332211 223345678999999988889999999999999999998 66777532
Q ss_pred ccccccccccccccccc-cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 646 SLISSSSLNTDIALDEI-LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 646 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..... ....... ...............+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 238 TDQQV-----IENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred ChHHH-----HHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 21100 0000000 000000000001112246889999999999999999999999885
No 171
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-37 Score=307.71 Aligned_cols=252 Identities=22% Similarity=0.343 Sum_probs=216.8
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+=|+..+.||+|.|+.|-.|++ =+|+.||||++.+.. -+......+.+|++.|+-++|||||++|++.......|+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTK--lD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTK--LDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccc--cchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 5677888899999999999954 479999999998732 2334567889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEeecccccccC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL-EYEAHVADFGIAKFLK 593 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~a~~~~ 593 (708)
+|.-.+|+|.||+-++.. .+.+....+++.||+.|+.|+|+. .||||||||+||.+-+ -|-|||.|||++-.+.
T Consensus 96 LELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 999999999999977653 478899999999999999999999 8999999999998754 5889999999999887
Q ss_pred CCCCccccccccccccCccccccCCCCc-chhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITE-KCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~-~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
++ ...+..+|+..|-|||.+.+..|+. ++||||+|+|+|.|++|+.||+- .+..+.+-.++|-+...+..
T Consensus 171 PG-~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqe--------ANDSETLTmImDCKYtvPsh 241 (864)
T KOG4717|consen 171 PG-KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQE--------ANDSETLTMIMDCKYTVPSH 241 (864)
T ss_pred Cc-chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccc--------ccchhhhhhhhcccccCchh
Confidence 54 4567789999999999999988874 79999999999999999999972 33456677788877765533
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+||.+|+..||++|.+.+||..+-|
T Consensus 242 ----vS~eCrdLI~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 242 ----VSKECRDLIQSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred ----hhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence 3445889999999999999999999987655
No 172
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1e-36 Score=322.56 Aligned_cols=262 Identities=22% Similarity=0.310 Sum_probs=198.0
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC---
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR--- 509 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--- 509 (708)
..++|++.+.||+|+||.||+|.. .+|+.||+|++..... .......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ--NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc--chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence 357899999999999999999965 4688999999875432 2234567889999999999999999999986543
Q ss_pred ---eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 510 ---HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 510 ---~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecC
Confidence 47999999976 66666532 378899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cccc----
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLNT---- 655 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~~---- 655 (708)
|+++..... .......++..|+|||++.+..++.++||||+||++|+|++|+.||......... ....
T Consensus 168 g~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 168 GLARTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred CCccccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 999754322 2233457889999999999989999999999999999999999999743211000 0000
Q ss_pred ---ccccccccCCC--CC--------------CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 656 ---DIALDEILDPR--LP--------------PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 656 ---~~~~~~~~~~~--~~--------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........... .+ ............+.+++.+||+.||++|||+.|+++|-+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00000000000 00 000000011245789999999999999999999999864
No 173
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2e-36 Score=307.89 Aligned_cols=254 Identities=22% Similarity=0.350 Sum_probs=195.9
Q ss_pred ccccceeccccCccEEEEEeCC-Cc--EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC------
Q 039322 438 FDAQYCIGNGGHGSVYRAELPS-GQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA------ 508 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~------ 508 (708)
|.+.+.||+|+||.||+|...+ +. .||+|.++.... .....+.+..|+++++.++|+||+++++++...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC--TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCC
Confidence 3567889999999999997643 32 689999875322 234467789999999999999999999987432
Q ss_pred CeeEEEEEeccCCCHHHHhcccc---cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 509 RHSFLVYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
...+++|||+++|+|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECC
Confidence 24689999999999999884322 223478999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccc
Q 039322 586 FGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 586 fg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
||++......... .....+++.|+|||...+..++.++||||||+++|||++ |+.||...... ...+.+
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~ 227 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--------EIYDYL 227 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHH
Confidence 9999876433221 122345678999999998889999999999999999999 88898642211 111111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 663 LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......... .....+.+++.+||+.||++|||+.++++.|+
T Consensus 228 ~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 269 (272)
T cd05075 228 RQGNRLKQPP---DCLDGLYSLMSSCWLLNPKDRPSFETLRCELE 269 (272)
T ss_pred HcCCCCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1111111111 12335789999999999999999999999875
No 174
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.5e-36 Score=312.65 Aligned_cols=262 Identities=21% Similarity=0.327 Sum_probs=199.6
Q ss_pred ccccccceeccccCccEEEEEeC-----------------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCce
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-----------------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI 498 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i 498 (708)
++|++.+.||+|+||.||++... ++..||+|+++... .......+.+|++++++++|+||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA---NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCc
Confidence 57999999999999999998532 23469999987532 22345688999999999999999
Q ss_pred eeEEEEEeeCCeeEEEEEeccCCCHHHHhccccc--------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCC
Q 039322 499 VKFYGFCSHARHSFLVYELLERGSLAAILSSDTA--------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISS 570 (708)
Q Consensus 499 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~ 570 (708)
+++++++..++..++||||+++|+|.+++..... ...+++.++..++.|++.|++|||+. +++||||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp 158 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLAT 158 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCh
Confidence 9999999999999999999999999999965431 12477889999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCccc
Q 039322 571 KNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK--GKHPRDFLS 646 (708)
Q Consensus 571 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt--g~~p~~~~~ 646 (708)
+||+++.++.++|+|||++..+...... .....++..|+|||...++.++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05095 159 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS 238 (296)
T ss_pred heEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC
Confidence 9999999999999999999865433211 112234678999999888889999999999999999998 777875322
Q ss_pred cccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 647 LISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........ .............+... ..+..+.+++.+||+.||++||++.||++.|+
T Consensus 239 ~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 239 DEQVIENT-GEFFRDQGRQVYLPKPA---LCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred hHHHHHHH-HHHHhhccccccCCCCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11100000 00000000000001111 12245889999999999999999999999875
No 175
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.5e-36 Score=307.04 Aligned_cols=253 Identities=29% Similarity=0.423 Sum_probs=204.9
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|++|.||+|.. .+++.+++|.+.... ....+.+.+|++++++++||||+++++++..++..+++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP----GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc----hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 6789999999999999999965 457889999987532 22467889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 ~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 79 MEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred EeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 99999999999986542 3488999999999999999999998 999999999999999999999999999986654
Q ss_pred CCCccccccccccccCccccccC---CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC-C
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTM---KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP-P 670 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 670 (708)
.........++..|+|||.+.+. .++.++||||+|+++|||++|+.||....... .........+.+ .
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~--------~~~~~~~~~~~~~~ 225 (262)
T cd06613 154 TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR--------ALFLISKSNFPPPK 225 (262)
T ss_pred hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhccCCCcc
Confidence 33333445678899999998776 78899999999999999999999986422110 000011110111 1
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.......+.++.+++.+||+.+|.+|||+++++.+
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 226 LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11122344568899999999999999999999875
No 176
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.3e-36 Score=311.82 Aligned_cols=256 Identities=23% Similarity=0.410 Sum_probs=203.4
Q ss_pred hccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
.++|+..+.||+|+||.||+|..+ ++..||+|++.... .......+.+|+.++++++||||+++++++.++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc---CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 467999999999999999999753 46789999987532 223456789999999999999999999999999
Q ss_pred CeeEEEEEeccCCCHHHHhcccc-------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCC
Q 039322 509 RHSFLVYELLERGSLAAILSSDT-------------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDIS 569 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 569 (708)
+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +++|||||
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~ 157 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLA 157 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccccc
Confidence 99999999999999999996432 123478899999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccc
Q 039322 570 SKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLS 646 (708)
Q Consensus 570 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~ 646 (708)
|+||+++.++.++|+|||++......... ......+..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 158 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~ 237 (288)
T cd05050 158 TRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA 237 (288)
T ss_pred HhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999998755332211 122334678999999988889999999999999999997 888875322
Q ss_pred cccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 647 LISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ......+.+....+... ..+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~--------~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 238 H--------EEVIYYVRDGNVLSCPD---NCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred H--------HHHHHHHhcCCCCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 1 11222222222221111 12346889999999999999999999999875
No 177
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.4e-36 Score=312.91 Aligned_cols=254 Identities=24% Similarity=0.362 Sum_probs=197.4
Q ss_pred ccccccceeccccCccEEEEEeCC-Cc--EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS-GQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~ 511 (708)
++|++.+.||+|+||.||+|...+ +. .+++|.++... .....+.+.+|++++.++ +||||+++++++...+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA---SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC---CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence 578899999999999999996643 33 47888876421 123356789999999999 799999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccc-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC
Q 039322 512 FLVYELLERGSLAAILSSDT-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE 578 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 578 (708)
++|+||+++|+|.+++.... ....+++..++.++.|++.|++|||++ |++||||||+||+++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~ 155 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGEN 155 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCC
Confidence 99999999999999996533 113478999999999999999999998 99999999999999999
Q ss_pred CcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 039322 579 YEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI 657 (708)
Q Consensus 579 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~ 657 (708)
+.+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||..... ..
T Consensus 156 ~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~--------~~ 226 (297)
T cd05089 156 LASKIADFGLSRGEEVY-VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC--------AE 226 (297)
T ss_pred CeEEECCcCCCccccce-eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HH
Confidence 99999999998643211 11112233567999999988889999999999999999997 9999864321 11
Q ss_pred ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.............+. .....+.+++.+||+.+|.+|||++++++.|+
T Consensus 227 ~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 227 LYEKLPQGYRMEKPR---NCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHHhcCCCCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111111111111 12345789999999999999999999998864
No 178
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7e-37 Score=313.54 Aligned_cols=262 Identities=22% Similarity=0.261 Sum_probs=200.1
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|++.+.||+|++|.||+|... +++.||+|.++.... .....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE--EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc--cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence 4788899999999999999654 688999999875321 1223467888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||++ ++|.+++........+++..++.++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 9997 58998886654445689999999999999999999999 9999999999999999999999999999765433
Q ss_pred CCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------ccc--------cccc
Q 039322 596 SSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS--------SLN--------TDIA 658 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~--------~~~--------~~~~ 658 (708)
........+++.|+|||.+.+. .++.++||||||+++|+|+||+.||......... ... ....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 3333344678899999987654 4688999999999999999999998632210000 000 0000
Q ss_pred cc----cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LD----EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .+....... .......++.+++.+||+.||++|||+.+++++=+
T Consensus 235 ~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~ 284 (285)
T cd07861 235 YKNTFPKWKKGSLRS---AVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284 (285)
T ss_pred HHhhccccCcchhHH---hcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCC
Confidence 00 000000000 00112345778999999999999999999998743
No 179
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.9e-36 Score=310.92 Aligned_cols=254 Identities=22% Similarity=0.387 Sum_probs=199.0
Q ss_pred cccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
+|++.+.||+|+||.||+|... ....+++|.+.... .......+.+|+.+++.++||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA---SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC---CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCC
Confidence 4778899999999999999642 23568899887532 12345678899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccc---------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCC
Q 039322 511 SFLVYELLERGSLAAILSSDT---------------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDIS 569 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 569 (708)
.++++||+.+|+|.+++.... ....+++..++.++.|++.|++|||+. +++|||||
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dik 154 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLA 154 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhh
Confidence 999999999999999986432 123478999999999999999999998 99999999
Q ss_pred CCCeeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccc
Q 039322 570 SKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLS 646 (708)
Q Consensus 570 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~ 646 (708)
|+||++++++.+||+|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||+...
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999865433221 122345678999999888889999999999999999998 999986322
Q ss_pred cccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 647 LISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. . ............ .......++.+++.+||+.+|++||+++|+++.|+
T Consensus 235 ~~--------~-~~~~~~~~~~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~ 284 (290)
T cd05045 235 PE--------R-LFNLLKTGYRME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELE 284 (290)
T ss_pred HH--------H-HHHHHhCCCCCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 11 0 011111111000 00112346889999999999999999999999875
No 180
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=332.83 Aligned_cols=249 Identities=27% Similarity=0.461 Sum_probs=205.2
Q ss_pred cccccceeccccCccEEEEE-eCCCc----EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 437 DFDAQYCIGNGGHGSVYRAE-LPSGQ----VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~-~~~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
..+..++||+|+||+||+|. .+.|+ +||+|++... ...+..+++..|+-+|.+++|||+++++|+|.... .
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~---t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ 772 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF---TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-L 772 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeecc---CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-H
Confidence 34566789999999999994 45544 6899998763 23345788999999999999999999999998876 7
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
.||++|++.|+|.|+++.++ ..+..+..+.|..|||+||.|||++ .+|||||.++|||+++...+||.|||+|+.
T Consensus 773 qlvtq~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~l 847 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKL 847 (1177)
T ss_pred HHHHHhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhc
Confidence 79999999999999998766 4588899999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCccccc--cccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CC
Q 039322 592 LKPESSNWTEF--AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RL 667 (708)
Q Consensus 592 ~~~~~~~~~~~--~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 667 (708)
..++...+... .-.+.|||=|.+....++.++|||||||.+||++| |..|++.....+.. +-+..+ ++
T Consensus 848 l~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~--------dlle~geRL 919 (1177)
T KOG1025|consen 848 LAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP--------DLLEKGERL 919 (1177)
T ss_pred cCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh--------HHHhccccC
Confidence 87765544333 33578999999999999999999999999999998 99999865432221 111121 23
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
+.++ ....+++.++.+||..|+..||+|+++...+
T Consensus 920 sqPp----iCtiDVy~~mvkCwmid~~~rp~fkel~~~f 954 (1177)
T KOG1025|consen 920 SQPP----ICTIDVYMVMVKCWMIDADSRPTFKELAEEF 954 (1177)
T ss_pred CCCC----CccHHHHHHHHHHhccCcccCccHHHHHHHH
Confidence 3332 3445688888999999999999999998765
No 181
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-36 Score=323.48 Aligned_cols=259 Identities=22% Similarity=0.356 Sum_probs=202.1
Q ss_pred HHhccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEE
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFC 505 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~ 505 (708)
...++|.+.+.||+|+||.||+|.+. .++.||+|+++... .....+.+..|++++.++. ||||+++++++
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA---RSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC---ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 34467888999999999999999753 34679999997632 1223457889999999997 99999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhccccc-----------------------------------------------------
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDTA----------------------------------------------------- 532 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------- 532 (708)
..++..++||||+++|+|.++++..+.
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 999999999999999999999965321
Q ss_pred ------------------------------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCC
Q 039322 533 ------------------------------------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISS 570 (708)
Q Consensus 533 ------------------------------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~ 570 (708)
...+++..++.++.|++.||+|||+. +++||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCc
Confidence 12367788899999999999999998 999999999
Q ss_pred CCeeeCCCCcEEEeecccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccc
Q 039322 571 KNLLLDLEYEAHVADFGIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSL 647 (708)
Q Consensus 571 ~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~ 647 (708)
+||+++.++.+||+|||+++....... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 999999999999999999986533221 1122356788999999988889999999999999999998 8999863221
Q ss_pred ccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 648 ISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ......+........ .......+.+++.+||+.+|++||+++|+++.|+
T Consensus 348 ~--------~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~ 397 (401)
T cd05107 348 N--------EQFYNAIKRGYRMAK--PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVG 397 (401)
T ss_pred h--------HHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 111111111111000 0112346889999999999999999999999875
No 182
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.1e-36 Score=308.64 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=196.0
Q ss_pred ccccccceeccccCccEEEEEeC-CCc----EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQ----VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.+|++.+.||+|+||.||+|.+. +++ .+++|.+.... ......++..|+..+++++||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS---GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc---chHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Cc
Confidence 57888999999999999999653 444 47778875321 12334577888889999999999999998864 45
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++++||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||.++
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVAD 157 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccce
Confidence 678999999999999997543 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CC
Q 039322 591 FLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILD-PR 666 (708)
Q Consensus 591 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~ 666 (708)
...+... ......++..|+|||.+.++.++.++||||||+++||+++ |+.||....... ...++. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---------~~~~~~~~~ 228 (279)
T cd05111 158 LLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---------VPDLLEKGE 228 (279)
T ss_pred eccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---------HHHHHHCCC
Confidence 6543322 1233456778999999988889999999999999999998 999986432111 011111 11
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.... ....+.+++.+||..||++|||+.|+++.|.
T Consensus 229 ~~~~~~~---~~~~~~~li~~c~~~~p~~Rps~~el~~~l~ 266 (279)
T cd05111 229 RLAQPQI---CTIDVYMVMVKCWMIDENVRPTFKELANEFT 266 (279)
T ss_pred cCCCCCC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1111111 1234678899999999999999999998774
No 183
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.1e-36 Score=307.90 Aligned_cols=254 Identities=22% Similarity=0.380 Sum_probs=199.3
Q ss_pred ccccceeccccCccEEEEEeCC----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe---
Q 039322 438 FDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH--- 510 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~--- 510 (708)
|.+.+.||+|+||.||+|.... +..||+|.++.... .......+..|++.++.++|+||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH--TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 5678899999999999996532 36799999875321 22345678999999999999999999998866554
Q ss_pred ---eEEEEEeccCCCHHHHhcccc---cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEe
Q 039322 511 ---SFLVYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVA 584 (708)
Q Consensus 511 ---~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 584 (708)
.++++||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEEC
Confidence 799999999999999985432 224589999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccccccc
Q 039322 585 DFGIAKFLKPESSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDE 661 (708)
Q Consensus 585 Dfg~a~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 661 (708)
|||+++......... ....++..|+|||.+.+..++.++||||||+++|||++ |..||..... ....+.
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--------~~~~~~ 227 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--------HEIYDY 227 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHH
Confidence 999998664433221 12234678999999988889999999999999999999 8888864221 111222
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.........+. .....+.+++.+||+.||++|||+.|++++|+
T Consensus 228 ~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~ 270 (273)
T cd05035 228 LRHGNRLKQPE---DCLDELYDLMYSCWRADPKDRPTFTKLREVLE 270 (273)
T ss_pred HHcCCCCCCCc---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 22222111111 22346889999999999999999999999874
No 184
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.1e-36 Score=308.44 Aligned_cols=251 Identities=27% Similarity=0.389 Sum_probs=204.3
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
..|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+..|++++++++|+||+++++++.+++..++|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc---cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 45778889999999999999754 58899999987531 123456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++... .+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 81 MEYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred EecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence 9999999999998643 378899999999999999999999 999999999999999999999999999976654
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........++..|+|||++.+..++.++||||||+++|||++|+.||....... ..... ....+ ....
T Consensus 154 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~-~~~~~--~~~~ 222 (277)
T cd06640 154 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--------VLFLI-PKNNP--PTLT 222 (277)
T ss_pred CccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--------Hhhhh-hcCCC--CCCc
Confidence 3333334567889999999988889999999999999999999999986322110 00101 00101 1122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||+.+|++||++++++++-.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred hhhhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 234567889999999999999999999998743
No 185
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.7e-36 Score=311.65 Aligned_cols=253 Identities=23% Similarity=0.378 Sum_probs=201.3
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+.|++.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|++++++++|+||+++++++..++..++|
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 67899999999999999999664 5889999998752 334567788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|..++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 88 IEFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred EecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 99999999998875433 3478999999999999999999998 999999999999999999999999999875443
Q ss_pred CCCccccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 595 ESSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
.........++..|+|||++. ...++.++||||||+++|||++|+.||..... ......+.....+.
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~~~~~~ 234 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSEPPT 234 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH--------HHHHHHHhcCCCcc
Confidence 333334556788999999885 34467799999999999999999999863221 11111111111110
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.........++.+++.+||+.+|++||+++|++++-
T Consensus 235 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 270 (292)
T cd06644 235 -LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHP 270 (292)
T ss_pred -CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 001112234578899999999999999999998863
No 186
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.4e-36 Score=312.68 Aligned_cols=262 Identities=21% Similarity=0.328 Sum_probs=198.7
Q ss_pred ccccccceeccccCccEEEEEeCC---------------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS---------------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK 500 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~ 500 (708)
++|++.+.||+|+||.||++.... ...||+|.++... .......+.+|++++++++|+|+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV---TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 689999999999999999986532 2358999987532 1234567899999999999999999
Q ss_pred EEEEEeeCCeeEEEEEeccCCCHHHHhcccc---------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCC
Q 039322 501 FYGFCSHARHSFLVYELLERGSLAAILSSDT---------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSK 571 (708)
Q Consensus 501 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~ 571 (708)
+++++...+..++||||+++++|.+++.... ....+++..++.++.|++.|++|||+. +++||||||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ 158 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATR 158 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChh
Confidence 9999999999999999999999999986432 112368899999999999999999999 9999999999
Q ss_pred CeeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCcccc
Q 039322 572 NLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK--GKHPRDFLSL 647 (708)
Q Consensus 572 Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt--g~~p~~~~~~ 647 (708)
||+++.++.+||+|||++......... .....++..|+|||...++.++.++||||||+++|+|++ |..||+....
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 999999999999999999765332211 122334678999999988889999999999999999998 5667653221
Q ss_pred ccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 648 ISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........ .............. ....+..+.+++.+||+.||++|||+++|++.|+
T Consensus 239 ~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 239 EQVIENTG-EFFRNQGRQIYLSQ---TPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHH-HhhhhccccccCCC---CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11000000 00000000000000 0012246889999999999999999999999885
No 187
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.8e-36 Score=313.66 Aligned_cols=260 Identities=24% Similarity=0.341 Sum_probs=201.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... ++..+|+|.+.... ......++.+|++++++++||||+++++++..++..++|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI---KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISIC 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEE
Confidence 36889999999999999999654 68889999986532 223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++... ..+++..+..++.|+++||+|||+.+ +++||||+|+||+++.++.+||+|||++.....
T Consensus 78 ~ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (308)
T cd06615 78 MEHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152 (308)
T ss_pred eeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence 9999999999999754 34789999999999999999999732 899999999999999999999999999875532
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccc------------------
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD------------------ 656 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~------------------ 656 (708)
. ......++..|+|||...+..++.++||||||+++|+|++|+.||..............
T Consensus 153 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 153 S--MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred c--ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCC
Confidence 2 22345678999999998888899999999999999999999999863221100000000
Q ss_pred ----------cccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 ----------IALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ----------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+.......+ .........++.+++.+||+.+|++|||++|++++-+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPP--KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCc--cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 000000000000 0000112345889999999999999999999998865
No 188
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.6e-36 Score=306.63 Aligned_cols=252 Identities=25% Similarity=0.487 Sum_probs=204.3
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|.+.+.||+|++|.||+|..++++.||||.+.... ...+.+.+|+.++++++|+||+++++++......++|
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-----MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-----cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence 46899999999999999999988788899999987532 2346788999999999999999999999998999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.... ...+++..+..++.|++.|++|||++ +++|+||+|+||++++++.+||+|||.+.....
T Consensus 80 ~e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 80 TEYMSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred EeccCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 99999999999997643 24589999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCC
Q 039322 595 ESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RLPPPS 671 (708)
Q Consensus 595 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 671 (708)
.... ......+..|+|||.+.+..++.++||||+|+++|++++ |+.||..... ......+... ..+.+.
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~ 227 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--------REVLEQVERGYRMPRPP 227 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCC
Confidence 2111 122234568999999998889999999999999999998 9999863221 1111111111 111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. .+..+.+++.+||+.+|++||+++++.+.|+
T Consensus 228 -~---~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 228 -N---CPEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred -C---CCHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 1 1345889999999999999999999998875
No 189
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.1e-36 Score=302.43 Aligned_cols=245 Identities=24% Similarity=0.409 Sum_probs=196.4
Q ss_pred eeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCC
Q 039322 443 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGS 522 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~ 522 (708)
.||+|+||.||+|...+++.||+|.++... .......+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDL---PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 689999999999988888999999987532 12334568899999999999999999999999999999999999999
Q ss_pred HHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc-cc
Q 039322 523 LAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW-TE 601 (708)
Q Consensus 523 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~ 601 (708)
|.+++.... ..+++..+..++.|++.||.|+|+. |++||||+|+||+++.++.+||+|||++.......... ..
T Consensus 79 L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 79 FLSFLRKKK--DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 999986543 3478999999999999999999998 99999999999999999999999999987543221111 12
Q ss_pred ccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCCchhHHHHH
Q 039322 602 FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RLPPPSRSVQEKLI 679 (708)
Q Consensus 602 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 679 (708)
..++..|+|||+..++.++.++||||||+++|++++ |..||....... ....+... ....+ ...+.
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~----~~~~~ 221 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--------AREQVEKGYRMSCP----QKCPD 221 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--------HHHHHHcCCCCCCC----CCCCH
Confidence 234568999999988889999999999999999998 999986432111 00111111 11111 11234
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 680 SIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.+++.+||+.+|++||++.|+++.|.
T Consensus 222 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 222 DVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 6889999999999999999999999875
No 190
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=7.6e-37 Score=312.76 Aligned_cols=254 Identities=19% Similarity=0.246 Sum_probs=198.7
Q ss_pred ccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|+..+.||+|+||+||+|.. .+++.||+|.+..... ........+.+|++++++++|++|+++.+++..++..++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRI-KKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhh-hhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 56678899999999999965 4688999999865321 112234557889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+++++|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~- 155 (285)
T cd05632 81 IMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG- 155 (285)
T ss_pred eccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCC-
Confidence 999999999886433 23589999999999999999999999 9999999999999999999999999999765332
Q ss_pred CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHH
Q 039322 597 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (708)
.......|+..|+|||++.+..++.++|+||+|+++|||++|+.||........ ................ ..
T Consensus 156 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~----~~~~~~~~~~~~~~~~----~~ 227 (285)
T cd05632 156 ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK----REEVDRRVLETEEVYS----AK 227 (285)
T ss_pred CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHhhhccccccC----cc
Confidence 222345789999999999888899999999999999999999999874221000 0001111111111111 11
Q ss_pred HHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 039322 677 KLISIMEVAFSCLNESPESRPT-----MKVVTQQ 705 (708)
Q Consensus 677 ~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 705 (708)
....+.+++.+||+.||++||+ +++++++
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 228 FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred CCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 2235778999999999999999 7788775
No 191
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.4e-36 Score=309.41 Aligned_cols=252 Identities=28% Similarity=0.411 Sum_probs=204.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||.|++|.||+|... +++.||+|.+.... .......+.+|++++++++|+||+++++++.++...++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE---AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWII 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc---cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEE
Confidence 36788899999999999999654 68899999987532 123456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+++++|.+++... .+++..++.++.|++.|+.|||+. +++||||+|+||++++++.++|+|||.+.....
T Consensus 78 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 150 (274)
T cd06609 78 MEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTS 150 (274)
T ss_pred EEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence 9999999999999754 489999999999999999999999 999999999999999999999999999987764
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........++..|+|||.+.+..++.++||||||+++|+|+||+.||...... .....+.....+.....
T Consensus 151 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~- 221 (274)
T cd06609 151 TMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--------RVLFLIPKNNPPSLEGN- 221 (274)
T ss_pred cccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--------HHHHHhhhcCCCCCccc-
Confidence 433344556788999999999888999999999999999999999998632210 11111111111110000
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+..+.+++.+||..+|++|||+++++++-+
T Consensus 222 -~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~ 253 (274)
T cd06609 222 -KFSKPFKDFVSLCLNKDPKERPSAKELLKHKF 253 (274)
T ss_pred -ccCHHHHHHHHHHhhCChhhCcCHHHHhhChh
Confidence 03345888999999999999999999998743
No 192
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-36 Score=313.92 Aligned_cols=256 Identities=22% Similarity=0.371 Sum_probs=200.7
Q ss_pred hccccccceeccccCccEEEEEeC--------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP--------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC 505 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~ 505 (708)
.++|.+.+.||+|+||.||+|... ++..+|+|.++... .......+..|+++++++ +|+||+++++++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC---ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 367999999999999999999642 23569999987532 223456788899999999 799999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDTA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 572 (708)
...+..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. |++||||||+|
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 170 (307)
T cd05098 94 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 170 (307)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHh
Confidence 999999999999999999999975431 23488999999999999999999998 99999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccc
Q 039322 573 LLLDLEYEAHVADFGIAKFLKPESSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLIS 649 (708)
Q Consensus 573 ill~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~ 649 (708)
|+++.++.+||+|||.+.......... ....++..|+|||.+.+..++.++||||+|+++|||++ |+.||.....
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-- 248 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-- 248 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--
Confidence 999999999999999987654322111 11223468999999988889999999999999999998 8888863221
Q ss_pred ccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+........+ ......+.+++.+||+.+|++|||+.+|++.|+
T Consensus 249 ------~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~ 297 (307)
T cd05098 249 ------EELFKLLKEGHRMDKP---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 297 (307)
T ss_pred ------HHHHHHHHcCCCCCCC---CcCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 1111111111111111 112346788999999999999999999999874
No 193
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.9e-36 Score=309.34 Aligned_cols=256 Identities=21% Similarity=0.311 Sum_probs=203.1
Q ss_pred hccccccceeccccCccEEEEEeCC-----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee-C
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPS-----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH-A 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~ 508 (708)
.++|.+.+.||+|+||.||+|...+ +..|++|.+... ......+.+.+|+.++++++|+||+++++++.. +
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH---ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 4688999999999999999997655 678999998643 233456778899999999999999999998766 4
Q ss_pred CeeEEEEEeccCCCHHHHhcccccc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAA-----QELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHV 583 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 583 (708)
...++++||+++|+|.+++...... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEE
Confidence 6789999999999999999764432 4589999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccc
Q 039322 584 ADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 584 ~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
+|||+++.+.+.... .....++..|+|||++.+..++.++||||||+++||+++ |+.||....... ...
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------~~~ 230 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE--------MAA 230 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH--------HHH
Confidence 999999865433221 122345678999999988889999999999999999999 999987432111 011
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.+....... ...+..+.+++.+||+.||++|||+.|+++.|.
T Consensus 231 ~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 231 YLKDGYRLAQP---INCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred HHHcCCCCCCC---CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11111000011 112335789999999999999999999999874
No 194
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.9e-36 Score=308.44 Aligned_cols=258 Identities=23% Similarity=0.348 Sum_probs=197.2
Q ss_pred ccccceeccccCccEEEEEe-----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--Ce
Q 039322 438 FDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RH 510 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~ 510 (708)
|...+.||+|+||.||.+.. .+++.||+|.++... .....+.+.+|++++++++||||+++++++... ..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC---GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 38889999999999988642 367889999987532 123456788999999999999999999988654 46
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++|+|.+++... .+++.+++.++.|++.|++|||++ +++||||||+||+++.++.++|+|||++.
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 155 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 155 (283)
T ss_pred EEEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccc
Confidence 78999999999999999653 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc------ccccccccc
Q 039322 591 FLKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS------LNTDIALDE 661 (708)
Q Consensus 591 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~------~~~~~~~~~ 661 (708)
........ .....++..|+|||...+..++.++||||||+++|||+||..||.......... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05080 156 AVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIE 235 (283)
T ss_pred ccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhh
Confidence 66533221 122335667999999988889999999999999999999999976422110000 000001111
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.....+ .....+..+.+++.+||+.+|++|||++++++.|+
T Consensus 236 ~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~ 279 (283)
T cd05080 236 LLERGMRLP--CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279 (283)
T ss_pred hhhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 111111110 01112346889999999999999999999999874
No 195
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-36 Score=312.83 Aligned_cols=256 Identities=21% Similarity=0.367 Sum_probs=202.0
Q ss_pred hccccccceeccccCccEEEEEe--------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL--------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC 505 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~ 505 (708)
..+|.+.+.||+|+||.||+|.. .++..||+|.+.... .......+.+|+.+++.+ +||||+++++++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc---chHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 47889999999999999999963 134579999987532 223456789999999999 899999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDTA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 572 (708)
...+..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||++ |++||||||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 167 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARN 167 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccce
Confidence 999999999999999999999975421 23578899999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccc
Q 039322 573 LLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLIS 649 (708)
Q Consensus 573 ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~ 649 (708)
|+++.++.+||+|||.+......... .....++..|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~- 246 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE- 246 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-
Confidence 99999999999999999866433222 122335678999999988889999999999999999998 78887632211
Q ss_pred ccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+........+ ...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 247 -------~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~ 294 (304)
T cd05101 247 -------ELFKLLKEGHRMDKP---ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLD 294 (304)
T ss_pred -------HHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 111111111111111 122345888999999999999999999999874
No 196
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3e-36 Score=305.83 Aligned_cols=254 Identities=24% Similarity=0.439 Sum_probs=201.6
Q ss_pred hccccccceeccccCccEEEEEeC-CC---cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SG---QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.++|+..+.||+|+||.||+|... ++ ..+|+|.++... .....+.+..|++++++++|+|++++.+++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY---TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 357888999999999999999764 23 379999987532 22345678899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++.
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 155 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSR 155 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccce
Confidence 999999999999999996543 3589999999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCCcc---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC
Q 039322 591 FLKPESSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 591 ~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
......... .....+..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--------~~~~~~i~~~~ 227 (268)
T cd05063 156 VLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--------HEVMKAINDGF 227 (268)
T ss_pred ecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--------HHHHHHHhcCC
Confidence 654322211 11223457999999988889999999999999999997 9999863221 11112221111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+... ..+..+.+++.+||+.+|++||++.+|++.|+
T Consensus 228 ~~~~~~---~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~ 265 (268)
T cd05063 228 RLPAPM---DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLD 265 (268)
T ss_pred CCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111111 22346889999999999999999999999874
No 197
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.7e-37 Score=328.46 Aligned_cols=253 Identities=22% Similarity=0.304 Sum_probs=196.4
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|+..+.||+|+||.||+|.. .+++.||+|+++.... ........+..|++++.+++|++|+++++++.+++..++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM-LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 3688899999999999999965 4688999999874211 1123356788899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 80 MEFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred EeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999996543 488999999999999999999999 999999999999999999999999999875422
Q ss_pred CCC-----------------------------------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCC
Q 039322 595 ESS-----------------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGK 639 (708)
Q Consensus 595 ~~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~ 639 (708)
... ......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 100 011346899999999999989999999999999999999999
Q ss_pred CCCCccccccccccccccccccccC--CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHHh
Q 039322 640 HPRDFLSLISSSSLNTDIALDEILD--PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPT---MKVVTQQV 706 (708)
Q Consensus 640 ~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~l 706 (708)
.||...... .....+.. .....+... .......+++.+++ .||++|++ ++|+++|-
T Consensus 234 ~Pf~~~~~~--------~~~~~i~~~~~~~~~p~~~--~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp 294 (360)
T cd05627 234 PPFCSETPQ--------ETYRKVMNWKETLVFPPEV--PISEKAKDLILRFC-TDSENRIGSNGVEEIKSHP 294 (360)
T ss_pred CCCCCCCHH--------HHHHHHHcCCCceecCCCC--CCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCC
Confidence 999743221 11111111 111111100 01224667777766 49999984 78888764
No 198
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.5e-36 Score=310.42 Aligned_cols=252 Identities=24% Similarity=0.367 Sum_probs=199.1
Q ss_pred ccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|++.+.||+|+||.||+|... ++..+++|.+... .....+.+.+|+++++.++|||++++++++..++..++|+|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK----SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC----CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 677888999999999999654 5778899988642 23446678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. |++||||+|+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 83 FCAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred ecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc
Confidence 999999999876432 3589999999999999999999999 99999999999999999999999999997654333
Q ss_pred CccccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 597 SNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
.......++..|+|||++. +..++.++||||+||++|||++|+.||...... ...........+..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~- 228 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSEPPTL- 228 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--------HHHHHHhhcCCCCC-
Confidence 3334456889999999874 345678999999999999999999998642211 11111111000000
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.........+.+++.+||+.||.+||++.+++++-+
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 229 AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence 001112345889999999999999999999998743
No 199
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.9e-36 Score=312.26 Aligned_cols=256 Identities=21% Similarity=0.369 Sum_probs=202.2
Q ss_pred hccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSH 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~ 507 (708)
.++|.+.+.||+|+||.||+|.. ..+..||+|+++... .....+.+.+|+++++++ +|+||+++++++..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA---HSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC---ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 36899999999999999999963 134579999987532 223456789999999999 79999999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
.+..++||||+.+|+|.++++.... ..+++.++..++.|++.|++|||++ +++|+||||+||+++.++.++++|||
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCc
Confidence 9999999999999999999965332 3379999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC
Q 039322 588 IAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILD 664 (708)
Q Consensus 588 ~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 664 (708)
++......... .....++..|+|||.+.+..++.++||||+|+++|||++ |+.||...... ........
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~--------~~~~~~~~ 258 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD--------SKFYKLIK 258 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch--------HHHHHHHH
Confidence 99865433221 122345678999999998889999999999999999998 99998632211 11111111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....... .......+.+++.+||+++|++|||+.|+++.|+
T Consensus 259 ~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~ 299 (302)
T cd05055 259 EGYRMAQ--PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIG 299 (302)
T ss_pred cCCcCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1111100 0111345889999999999999999999999875
No 200
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=292.35 Aligned_cols=266 Identities=19% Similarity=0.335 Sum_probs=219.9
Q ss_pred HHHHHHHhccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEE
Q 039322 428 YDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFC 505 (708)
Q Consensus 428 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~ 505 (708)
|++..+.+++ .||+|+|+.|-.+ ...+|..||||++.+. ....++++.+|++++.+.+ |+||+.++++|
T Consensus 75 F~d~YkLt~e-----~LGeGAyasVqtcv~i~t~~EYAVKiidKq----~gHsR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 75 FEDMYKLTSE-----LLGEGAYASVQTCVSIQTGKEYAVKIIDKQ----PGHSRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred HHHHHHhHHH-----HhcCccceeeeeeeeeccchhhhhhhhhcC----CchHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 5666666654 4999999999988 5678999999999873 4467889999999999995 99999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc---EE
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AH 582 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~k 582 (708)
+++...|+|||-|.||+|.+++.++.. +++.+..++.++||.||.|||++ ||.|||+||+|||...... +|
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~~~~~---F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQKRKH---FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred cccceEEEEEecccCchHHHHHHHhhh---ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCcee
Confidence 999999999999999999999976653 89999999999999999999999 9999999999999977654 79
Q ss_pred EeecccccccCCCC-------CccccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCcccc---
Q 039322 583 VADFGIAKFLKPES-------SNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSL--- 647 (708)
Q Consensus 583 l~Dfg~a~~~~~~~-------~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~--- 647 (708)
|+||.++....... ......+|+..|||||+.. ...|+.+.|.||||+++|-|++|..||...=.
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 99999886543211 1234578999999999753 23578899999999999999999999974321
Q ss_pred ccccc----cccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 648 ISSSS----LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 648 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.|..+ ......++.+.++.+..+...|...+.+-.+++...+..||.+|.++.++++|-++
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~ 364 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWV 364 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence 11111 11234567788888888888888888888899999999999999999999987653
No 201
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=319.46 Aligned_cols=251 Identities=24% Similarity=0.386 Sum_probs=204.8
Q ss_pred ccccccceeccccCccEEEEEeC--CCc--EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP--SGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
++....+.||+|.||.|++|.|. +|+ .||||.++.+... .....|.+|+.+|.+++|+|++++||+..+ ...
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~---~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN---AIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc---hhHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 44556678999999999999664 344 5999999875322 257889999999999999999999999988 678
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
.+|+|.++.|+|.+.|++ .....+-......++.|||.||.||.++ ++|||||..+|+++.....|||+|||+.+-
T Consensus 186 mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRa 261 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRA 261 (1039)
T ss_pred hHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceec
Confidence 899999999999999987 3335578889999999999999999999 999999999999999999999999999997
Q ss_pred cCCCCCcccc---ccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 039322 592 LKPESSNWTE---FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 592 ~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
.......+.+ ......|.|||.+...+++.++|||+|||.+|||+| |+.||..... ...++.+-++..
T Consensus 262 Lg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------~qIL~~iD~~er 333 (1039)
T KOG0199|consen 262 LGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------IQILKNIDAGER 333 (1039)
T ss_pred cCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--------HHHHHhcccccc
Confidence 7655554432 224579999999999999999999999999999998 8899864332 233333333333
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
-+.+..+ +++++++++.||..+|++||||..+.+.
T Consensus 334 LpRPk~c---sedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 334 LPRPKYC---SEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred CCCCCCC---hHHHHHHHHHhccCCccccccHHHHHHh
Confidence 3333333 4468888999999999999999998643
No 202
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.1e-36 Score=311.17 Aligned_cols=255 Identities=25% Similarity=0.410 Sum_probs=203.8
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||+|.+... .....+.+..|++++++++|+||+++++++..++..++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE----SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Confidence 367999999999999999999664 6889999998642 23445678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.+++.... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+....
T Consensus 80 v~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 80 LIEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNK 154 (280)
T ss_pred EeeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhc
Confidence 999999999999986543 3589999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCCccccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 594 PESSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
..........++..|+|||.+. ...++.++||||||+++|||++|+.||...... .....+.....+
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~ 226 (280)
T cd06611 155 STLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--------RVLLKILKSEPP 226 (280)
T ss_pred ccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--------HHHHHHhcCCCC
Confidence 4433344556889999999875 334677999999999999999999998743211 111111111100
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...........+.+++.+||+.+|++||++.+++++-+
T Consensus 227 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (280)
T cd06611 227 -TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPF 264 (280)
T ss_pred -CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChh
Confidence 00011122345788999999999999999999998754
No 203
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.6e-36 Score=305.10 Aligned_cols=249 Identities=26% Similarity=0.444 Sum_probs=201.4
Q ss_pred ceeccccCccEEEEEeCC----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEe
Q 039322 442 YCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
+.||+|+||.||+|.... +..|++|.+...... ...+.+.+|++.++.++|+|++++++++...+..++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE---EERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch---hHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEe
Confidence 368999999999996643 788999998864321 2467889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccccc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 518 LERGSLAAILSSDTA------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
+++++|.+++..... ...+++.+++.++.|++.|++|||++ +++||||+|+||+++.++.++|+|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccc
Confidence 999999999976521 25589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCC
Q 039322 592 LKPES--SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 592 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
..... .......++..|+|||.+....++.++||||+|+++|||++ |..||+.... .............
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~ 226 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--------EEVLEYLRKGYRL 226 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCC
Confidence 65432 12233456789999999988889999999999999999999 6999874321 1111111111111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+ ...+.++.+++.+||+.+|++|||+.|++++|+
T Consensus 227 ~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 PKP---EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCC---ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111 112346889999999999999999999999874
No 204
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.8e-36 Score=305.33 Aligned_cols=255 Identities=22% Similarity=0.329 Sum_probs=206.1
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|++.+.||+|+||.+|.+.. .+|+.||+|.+..... .....+++.+|++++++++||||+++++++...+..++|+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEE
Confidence 478889999999999999954 4688999999864211 1234567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 79 DYCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST 154 (256)
T ss_pred ecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence 99999999999865432 3478899999999999999999998 9999999999999999999999999999866543
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
........++..|+|||+..+..++.++|+||||+++|+|++|+.||..... ......+..+..+....
T Consensus 155 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~--- 223 (256)
T cd08218 155 VELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM--------KNLVLKIIRGSYPPVSS--- 223 (256)
T ss_pred hhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH--------HHHHHHHhcCCCCCCcc---
Confidence 3333345678899999999888899999999999999999999999863221 11122222222221111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
....++.+++.+||+.+|++||++.||+++-++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 223458899999999999999999999987543
No 205
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.8e-36 Score=304.12 Aligned_cols=254 Identities=26% Similarity=0.361 Sum_probs=203.3
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-CeeEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA-RHSFLV 514 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-~~~~lv 514 (708)
+|++.+.||+|++|.||++..+ +++.||+|.+..... .....+.+..|++++++++|+|++++++.+... ...+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA--SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEE
Confidence 4788999999999999999654 578899999865321 223456788999999999999999999988644 467899
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.... ...+++.+++.++.|++.|+++||+. |++||||+|+||+++.++.++|+|||++.....
T Consensus 79 ~e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 79 MGFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred ecccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 99999999999997543 24589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........+++.|+|||+..+..++.++||||+|+++|+|++|+.||+.... ............+...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~--- 223 (257)
T cd08223 155 QCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM--------NSLVYRIIEGKLPPMP--- 223 (257)
T ss_pred cCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhcCCCCCc---
Confidence 33334455688999999999998899999999999999999999999873221 1111112222221111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+.+++.+||+.+|++|||+.+++++-+
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 256 (257)
T cd08223 224 KDYSPELGELIATMLSKRPEKRPSVKSILRQPY 256 (257)
T ss_pred cccCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 123346889999999999999999999998744
No 206
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.9e-36 Score=305.82 Aligned_cols=258 Identities=28% Similarity=0.403 Sum_probs=205.9
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|++|.||+|.. .++..+|+|++..... ....+.+.+|++.++.++|+|++++++.+..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC---QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc---chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEE
Confidence 4688999999999999999964 4688999999875321 12567789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+|++++++|.+++........+++..+..++.|++.|++|||+. |++||||+|+||++++++.++|+|||++..+..
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLAD 154 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence 99999999999997654334689999999999999999999999 999999999999999999999999999886654
Q ss_pred CCCc----cccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 595 ESSN----WTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 595 ~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
.... .....++..|+|||++... .++.++|+||||+++|+|++|+.||...... ...........+.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~ 226 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--------KVLMLTLQNDPPS 226 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--------hhHHHHhcCCCCC
Confidence 3322 1334678899999998776 7889999999999999999999998643211 1111111111100
Q ss_pred CC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ......+..+.+++.+||+.||++||+++++++|-+
T Consensus 227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~ 266 (267)
T cd06610 227 LETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKF 266 (267)
T ss_pred cCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCC
Confidence 00 001123456789999999999999999999998754
No 207
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.6e-36 Score=312.36 Aligned_cols=256 Identities=21% Similarity=0.371 Sum_probs=200.4
Q ss_pred hccccccceeccccCccEEEEEeC--------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP--------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC 505 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~ 505 (708)
.++|.+.+.||+|+||.||+|... ++..||+|.++... .......+..|+++++++ +||||+++++++
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA---TDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC---ChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 368899999999999999999642 24579999987532 223456788999999999 699999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhcccc-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDT-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 572 (708)
...+..++||||+++|+|.+++.... ....+++.++.+++.|++.||+|||++ |++||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 164 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARN 164 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccccee
Confidence 99999999999999999999996532 123588999999999999999999998 99999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccc
Q 039322 573 LLLDLEYEAHVADFGIAKFLKPESSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLIS 649 (708)
Q Consensus 573 ill~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~ 649 (708)
|+++.++.+||+|||.++......... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~- 243 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE- 243 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 999999999999999998654322211 12234467999999988889999999999999999999 88898643211
Q ss_pred ccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
............... .....++.+++.+||+.+|++|||+.|+++.|+
T Consensus 244 -------~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 291 (314)
T cd05099 244 -------ELFKLLREGHRMDKP---SNCTHELYMLMRECWHAVPTQRPTFKQLVEALD 291 (314)
T ss_pred -------HHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111111111111111 112235778999999999999999999998774
No 208
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-36 Score=312.24 Aligned_cols=257 Identities=23% Similarity=0.360 Sum_probs=203.0
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +++.||+|.++... .......+.+|++++++++|+||+++++++..++..++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEE
Confidence 36888999999999999999764 78999999986532 223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++........+++..+..++.|++.|+.|||+.+ +++||||+|+||+++.++.++|+|||.+..+..
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence 999999999999876433346899999999999999999999742 899999999999999999999999999976532
Q ss_pred CCCccccccccccccCccccccCC------CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMK------ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~------~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
. ......++..|+|||.+.+.. ++.++|+||+||++|+|++|+.||...... ........+.....+
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~ 228 (286)
T cd06622 156 S--LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----NIFAQLSAIVDGDPP 228 (286)
T ss_pred C--ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----hHHHHHHHHhhcCCC
Confidence 2 223345788999999886543 477999999999999999999998632110 001111222222211
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .......+.+++.+||+.+|++||++++++++-+
T Consensus 229 ~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 229 TL---PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred CC---CcccCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence 11 1123456788999999999999999999998754
No 209
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8.9e-37 Score=311.24 Aligned_cols=251 Identities=26% Similarity=0.382 Sum_probs=201.9
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+.|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+..|++++++++||||+++++++..++..++|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc---chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEE
Confidence 4566778899999999999965 457889999987532 123456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.. ..+++..+..++.|++.|+.|||++ +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 81 MEYLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred EEccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccC
Confidence 999999999999864 3478999999999999999999998 999999999999999999999999999986654
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........++..|+|||++.+..++.++||||||+++|||++|+.||...... .....+.....+. ..
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~~~~~~~~~~---~~ 222 (277)
T cd06642 154 TQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--------RVLFLIPKNSPPT---LE 222 (277)
T ss_pred cchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--------hHHhhhhcCCCCC---CC
Confidence 333333446788999999999888999999999999999999999998632211 0011111111111 11
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||+.+|++||++.+++++-+
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 223 GQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence 123345889999999999999999999998754
No 210
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.3e-36 Score=321.38 Aligned_cols=262 Identities=21% Similarity=0.291 Sum_probs=198.5
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC----
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA---- 508 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~---- 508 (708)
..++|+..+.||+|+||.||+|.. ..++.||||.+..... .......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc--ChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 457899999999999999999965 4688999999875332 223456788899999999999999999988643
Q ss_pred --CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 509 --RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 509 --~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeC
Confidence 357999999976 67766642 378899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------c-c----
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------L-N---- 654 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~-~---- 654 (708)
|+++..... .......++..|+|||++.+..++.++|||||||++|+|++|+.||.......... . .
T Consensus 164 g~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 164 GLARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242 (355)
T ss_pred cccccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 999865432 22334578999999999998889999999999999999999999997432110000 0 0
Q ss_pred --cccccccccC----------------CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 --TDIALDEILD----------------PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 --~~~~~~~~~~----------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.. ...+............+.+++.+|++.||++|||+.|+++|-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~ 313 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcc
Confidence 0000000000 0000000011112345789999999999999999999999854
No 211
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.4e-36 Score=307.36 Aligned_cols=260 Identities=27% Similarity=0.410 Sum_probs=198.1
Q ss_pred ccccccceeccccCccEEEEEe-----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA-- 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-- 508 (708)
.+|++.+.||+|+||.||+|.. .+++.||+|.+... .....+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS----TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 5788899999999999999964 35789999998753 233456789999999999999999999987543
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
...++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~ 154 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGL 154 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcc
Confidence 46889999999999999996543 3479999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcc---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccc-------cc
Q 039322 589 AKFLKPESSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD-------IA 658 (708)
Q Consensus 589 a~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~-------~~ 658 (708)
+.......... ....++..|+|||+..+..++.++||||||+++|||++|..|+.............. ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 155 TKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH 234 (284)
T ss_pred cccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH
Confidence 98764333221 112234569999999888899999999999999999998877543221100000000 00
Q ss_pred cccccCCC-CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LDEILDPR-LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+..... ..+... ..+..+.+++.+||+.+|++|||+.||++.|+
T Consensus 235 ~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05081 235 LIELLKNNGRLPAPP---GCPAEIYAIMKECWNNDPSQRPSFSELALQVE 281 (284)
T ss_pred HHHHHhcCCcCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 00111111 111111 12335889999999999999999999999875
No 212
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.1e-36 Score=323.64 Aligned_cols=262 Identities=25% Similarity=0.322 Sum_probs=198.3
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC-----e
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR-----H 510 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~-----~ 510 (708)
+|+..+.||+|+||.||+|.. .+|+.||+|++.... ......+.+.+|+++++.++|+||+++++++..++ .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF--QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc--cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccce
Confidence 478889999999999999965 478999999986532 22334567889999999999999999999998776 7
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++|+||+. ++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred EEEEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEecccccee
Confidence 899999997 4788877543 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-ccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------cc-----
Q 039322 591 FLKPESS-NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------TD----- 656 (708)
Q Consensus 591 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------~~----- 656 (708)
....... ......++..|+|||++.+. .++.++||||+||++|||++|+.||............ ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 152 VEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred ecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 6543322 22334678899999998764 4788999999999999999999999743321100000 00
Q ss_pred ---cccccccCCCCCCCCc-----hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 ---IALDEILDPRLPPPSR-----SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ---~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+......++.. ........+.+++.+|++.||++|||++|+++|-+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 0000000000000000 00111345788999999999999999999998754
No 213
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3e-36 Score=303.60 Aligned_cols=251 Identities=25% Similarity=0.432 Sum_probs=200.8
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
.+|++.+.||+|+||.||+|...+++.+|+|.+.... .....+.+|++++++++||+++++++++......++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-----MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-----CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence 5788889999999999999987778899999987532 12456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++.... ..++++.++.++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 153 (256)
T cd05112 79 EFMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD 153 (256)
T ss_pred EcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccC
Confidence 9999999999986543 3478999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 596 SSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 596 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
... .....++.+|+|||+..++.++.++||||+|+++|||++ |+.||...... ..............+..
T Consensus 154 ~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~ 225 (256)
T cd05112 154 QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--------EVVETINAGFRLYKPRL 225 (256)
T ss_pred cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHhCCCCCCCCCC
Confidence 211 112234678999999988889999999999999999998 99998632211 11111111000000011
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 226 ---~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 ---ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1245889999999999999999999999874
No 214
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.9e-36 Score=306.82 Aligned_cols=253 Identities=23% Similarity=0.404 Sum_probs=198.2
Q ss_pred hccccccceeccccCccEEEEEe-CCCc----EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQ----VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
..+|+..+.||+|+||.||+|.+ .+|+ .||+|+++... .......+..|+.+++.++|+||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~- 81 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT---SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS- 81 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC---CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-
Confidence 36788999999999999999964 3444 48999987532 223456788999999999999999999999754
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
..++++||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++
T Consensus 82 ~~~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~ 156 (279)
T cd05109 82 TVQLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLA 156 (279)
T ss_pred CcEEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCce
Confidence 4679999999999999997543 3589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC
Q 039322 590 KFLKPESSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 590 ~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
+......... ....++..|+|||...+..++.++|||||||++|||++ |..||+...... ....+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~~~~~~~ 228 (279)
T cd05109 157 RLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--------IPDLLEKGE 228 (279)
T ss_pred eecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--------HHHHHHCCC
Confidence 8664332221 12234678999999988889999999999999999998 899986422110 000011111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.. ......+.+++.+||+.||++||++.++++.++
T Consensus 229 ~~~~~---~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 229 RLPQP---PICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred cCCCC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 112345788999999999999999999998764
No 215
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.2e-36 Score=302.54 Aligned_cols=249 Identities=26% Similarity=0.425 Sum_probs=202.2
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|+||.||+|... |+.||+|.++... ...+++.+|+.++++++|+||+++++++...+..++|
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDS-----TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccch-----hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEE
Confidence 367899999999999999999875 7899999997632 1467789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.++....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ 154 (256)
T ss_pred EEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccc
Confidence 999999999999975442 3589999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.. .....+..|+|||++.++.++.++||||||+++|||++ |..||...... ........ ..... .
T Consensus 155 ~~---~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~-~~~~~--~ 220 (256)
T cd05039 155 GQ---DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------DVVPHVEK-GYRME--A 220 (256)
T ss_pred cc---ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHhc-CCCCC--C
Confidence 21 12334668999999988889999999999999999997 99998632211 00011000 10000 0
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+..+.+++.+||..+|++|||++|+++.|+
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 221 PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 0112346889999999999999999999999874
No 216
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.1e-36 Score=306.76 Aligned_cols=254 Identities=27% Similarity=0.396 Sum_probs=201.5
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcch-----hHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQ-----IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
+|.+...||+|++|.||+|.. .+++.||+|.+........ ....+.+.+|++++++++||||+++++++..++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367788999999999999965 4688999999876433221 1123568899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999996543 478899999999999999999999 99999999999999999999999999988
Q ss_pred ccCCCCC------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC
Q 039322 591 FLKPESS------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD 664 (708)
Q Consensus 591 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 664 (708)
....... ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~ 226 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL--------QAIFKIGE 226 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH--------HHHHHHhc
Confidence 6642211 112235788999999998888999999999999999999999998742211 11111111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+.. .......+.+++.+||+.||++||++.|++++=.
T Consensus 227 ~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 266 (267)
T cd06628 227 NASPEI---PSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266 (267)
T ss_pred cCCCcC---CcccCHHHHHHHHHHccCCchhCcCHHHHhhCCC
Confidence 111111 1122345788999999999999999999998643
No 217
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.1e-36 Score=306.41 Aligned_cols=256 Identities=23% Similarity=0.357 Sum_probs=202.3
Q ss_pred cccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCc--chhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPC--DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+|...+.||+|+||.||+|...+++.+|+|.+...... ........+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47788999999999999998878999999998753221 1123346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999996543 478999999999999999999999 999999999999999999999999999875432
Q ss_pred CC------CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 595 ES------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 595 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
.. .......++..|+|||++.+..++.++||||+|+++|+|++|+.||......... ..... .....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~-----~~~~~-~~~~~~ 228 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM-----FYIGA-HRGLMP 228 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH-----HHhhh-ccCCCC
Confidence 11 1122345788999999999888999999999999999999999998642211100 00000 000011
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.... .....+.+++.+||+.+|++||++.|++++=+
T Consensus 229 ~~~~---~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 229 RLPD---SFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264 (265)
T ss_pred CCCC---CCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 1111 12345788999999999999999999998643
No 218
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.2e-36 Score=304.76 Aligned_cols=246 Identities=26% Similarity=0.437 Sum_probs=197.2
Q ss_pred ceeccccCccEEEEEeCC--C--cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEe
Q 039322 442 YCIGNGGHGSVYRAELPS--G--QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
+.||+|++|.||+|.+.+ + ..||+|.+...... ...+.+..|++.+++++|+||+++++++.. ...++|+||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS---DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH---HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEe
Confidence 358999999999996543 3 36999998864321 456789999999999999999999999988 889999999
Q ss_pred ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 039322 518 LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 597 (708)
+++|+|.+++..... ..+++..++.++.|++.||+|||++ +++|+||+|+||+++.++.+||+|||++........
T Consensus 77 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 77 APLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred cCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccccc
Confidence 999999999976543 4589999999999999999999999 999999999999999999999999999987654322
Q ss_pred cc---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccccccccc--CCCCCCCC
Q 039322 598 NW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEIL--DPRLPPPS 671 (708)
Q Consensus 598 ~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 671 (708)
.. ....++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+. ......+
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~- 223 (257)
T cd05040 153 HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--------QILKKIDKEGERLERP- 223 (257)
T ss_pred ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHhcCCcCCCC-
Confidence 21 12346788999999988889999999999999999998 99998632211 1111111 0111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 224 ---~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 ---EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ---ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 112346889999999999999999999999874
No 219
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.3e-36 Score=311.99 Aligned_cols=255 Identities=25% Similarity=0.376 Sum_probs=197.8
Q ss_pred hccccccceeccccCccEEEEEeC-CCc--EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~ 510 (708)
.++|++.+.||+|+||.||+|... ++. .+|+|.++... .......+.+|++++.++ +|+||+++++++..++.
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~ 82 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 82 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC---CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC
Confidence 468899999999999999999754 444 45777765421 223456788999999999 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 039322 511 SFLVYELLERGSLAAILSSDTA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 577 (708)
.++||||+++|+|.+++..... ...+++.+++.++.|++.|++|||+. |++||||||+||+++.
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~ 159 (303)
T cd05088 83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGE 159 (303)
T ss_pred ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecC
Confidence 9999999999999999965431 23578999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccc
Q 039322 578 EYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTD 656 (708)
Q Consensus 578 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 656 (708)
++.+||+|||++...... ........+..|+|||.+.+..++.++||||||+++|||+| |..||......
T Consensus 160 ~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------- 230 (303)
T cd05088 160 NYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------- 230 (303)
T ss_pred CCcEEeCccccCcccchh-hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--------
Confidence 999999999998643211 11112234568999999888888999999999999999998 99998632211
Q ss_pred cccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 IALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
............... ......+.+++.+||+.+|++||+++++++.++
T Consensus 231 ~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 231 ELYEKLPQGYRLEKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred HHHHHHhcCCcCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111111000001 112335789999999999999999999998764
No 220
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.7e-36 Score=305.36 Aligned_cols=252 Identities=27% Similarity=0.499 Sum_probs=200.3
Q ss_pred ccccccceeccccCccEEEEEeC-CC---cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SG---QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
.+|++.+.||+|+||.||+|... ++ ..||+|.+.... .......|..|+.++++++||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 56888999999999999999754 23 369999987532 234467899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++|+|.+++.... ..+++.+++.++.|++.|++|||++ |++||||||+||+++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~ 155 (269)
T cd05065 81 MIITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRF 155 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccc
Confidence 99999999999999997543 3579999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCcc--cc-c--cccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccccccccc-C
Q 039322 592 LKPESSNW--TE-F--AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEIL-D 664 (708)
Q Consensus 592 ~~~~~~~~--~~-~--~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~-~ 664 (708)
........ .. . ..+..|+|||.+.+..++.++||||+|+++||+++ |..||...... .....+. +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--------~~~~~i~~~ 227 (269)
T cd05065 156 LEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVINAIEQD 227 (269)
T ss_pred cccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcC
Confidence 54322211 11 1 12457999999998889999999999999999986 99998643211 1111111 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+.+. +.+..+.+++.+||+.+|.+||+++++++.|+
T Consensus 228 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 228 YRLPPPM----DCPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred CcCCCcc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 22345788999999999999999999999875
No 221
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-38 Score=317.01 Aligned_cols=249 Identities=29% Similarity=0.405 Sum_probs=202.2
Q ss_pred cccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
-|.-.+.||.|+||.||-|+ ..+.+.||||++.... ....+....+..|++.+++++|||++.+-|+|..+...|+||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySG-KQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG-KQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccc-cccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 35556779999999999995 4578899999998643 233456778999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
|||-| +-.|.+.-++ +++.+-++..|..+...||+|||+. +.||||||+.|||+++.|.|||+|||.|....+.
T Consensus 106 EYClG-SAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 106 EYCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA 179 (948)
T ss_pred HHHhc-cHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence 99965 7777776554 5688899999999999999999999 9999999999999999999999999999877654
Q ss_pred CCccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 596 SSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
..++|||.|||||++. .+.|+-++||||+||...||.-.++|+=.+..+ ..+..+-...- +.-
T Consensus 180 ----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM--------SALYHIAQNes--PtL 245 (948)
T KOG0577|consen 180 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNES--PTL 245 (948)
T ss_pred ----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH--------HHHHHHHhcCC--CCC
Confidence 4578999999999885 578999999999999999999999995322221 11111111111 111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
...++...|..++..|+++-|.+|||.+++++|-
T Consensus 246 qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 246 QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 1234555688888899999999999999998873
No 222
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=9.9e-37 Score=329.17 Aligned_cols=260 Identities=22% Similarity=0.250 Sum_probs=191.5
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA----- 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 508 (708)
..+|++.+.||+|+||.||+|.. .+++.||||++... .....+|+.++++++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~--------~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD--------PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC--------cchHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence 46799999999999999999965 46889999988642 12234699999999999999999887432
Q ss_pred ---CeeEEEEEeccCCCHHHHhccc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEE
Q 039322 509 ---RHSFLVYELLERGSLAAILSSD-TAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHV 583 (708)
Q Consensus 509 ---~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl 583 (708)
...++||||+++ ++.+++... .....+++..++.++.|++.||+|||++ +|+||||||+||+++.++ .+||
T Consensus 137 ~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred CCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceee
Confidence 246799999985 777776432 2234589999999999999999999999 999999999999998665 7999
Q ss_pred eecccccccCCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------ccc
Q 039322 584 ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------LNT 655 (708)
Q Consensus 584 ~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~~~ 655 (708)
+|||+|+...... ......+++.|+|||++.+. .++.++||||+||++|||++|..||.......... ...
T Consensus 213 ~DFGla~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 213 CDFGSAKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPT 291 (440)
T ss_pred eccccchhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9999998664332 22345679999999987654 68999999999999999999999997432110000 000
Q ss_pred ccccc----cccCCCCCCCC-chh-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 656 DIALD----EILDPRLPPPS-RSV-----QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 656 ~~~~~----~~~~~~~~~~~-~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..... .+.+..++... ... ...+.++.+++.+||.+||++|||+.|+++|-+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 00000 00000011000 000 012346789999999999999999999998754
No 223
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6e-37 Score=343.32 Aligned_cols=260 Identities=22% Similarity=0.333 Sum_probs=200.1
Q ss_pred HHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--C
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--R 509 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~ 509 (708)
...++|.+.+.||+|+||.||+|... +++.||+|.+.... ........+..|+.++++++||||++++++|... .
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~--l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG--LKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccc--cCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 34578999999999999999999654 57789999987532 1223467789999999999999999999988653 5
Q ss_pred eeEEEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCC----CCeEEccCCCCCeeeCCC------
Q 039322 510 HSFLVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCF----PPIVHQDISSKNLLLDLE------ 578 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~----~~ivH~dlk~~Nill~~~------ 578 (708)
.+|+||||+++|+|.+++.... ....+++..++.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 6899999999999999997532 22458999999999999999999998521 259999999999999642
Q ss_pred -----------CcEEEeecccccccCCCCCccccccccccccCcccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 039322 579 -----------YEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKHPRDFL 645 (708)
Q Consensus 579 -----------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~ 645 (708)
+.+||+|||++....... ......|++.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 348999999998654322 2234578999999998854 45788999999999999999999999632
Q ss_pred ccccccccccccccccccC-CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 646 SLISSSSLNTDIALDEILD-PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
... ......+.. +.++. ......+.++|..||+.+|++||++.|++++-+
T Consensus 247 ~~~-------~qli~~lk~~p~lpi-----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ 297 (1021)
T PTZ00266 247 NNF-------SQLISELKRGPDLPI-----KGKSKELNILIKNLLNLSAKERPSALQCLGYQI 297 (1021)
T ss_pred CcH-------HHHHHHHhcCCCCCc-----CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence 211 011111111 11111 112345889999999999999999999987543
No 224
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.2e-37 Score=322.51 Aligned_cols=245 Identities=23% Similarity=0.251 Sum_probs=189.6
Q ss_pred eccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc---cCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI---RHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 444 ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
||+|+||.||+|.. .+++.||||++.+... ........+..|..++... +||+|+++++++..++..++||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEI-VAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHH-hhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence 69999999999965 4689999999864211 1112234455677776655 69999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~ 153 (330)
T cd05586 80 GGELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTT 153 (330)
T ss_pred CChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCc
Confidence 99999998653 3489999999999999999999999 99999999999999999999999999997543333333
Q ss_pred ccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHH
Q 039322 600 TEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKL 678 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (708)
....|+..|+|||++.+. .++.++||||+||++|||++|+.||..... ......+.......+... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~---~~ 222 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--------QQMYRNIAFGKVRFPKNV---LS 222 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--------HHHHHHHHcCCCCCCCcc---CC
Confidence 456789999999988754 478899999999999999999999864221 111112222111111111 12
Q ss_pred HHHHHHHHhccCCCCCCCC----CHHHHHHHh
Q 039322 679 ISIMEVAFSCLNESPESRP----TMKVVTQQV 706 (708)
Q Consensus 679 ~~l~~li~~cl~~dP~~RP----s~~evl~~l 706 (708)
..+.+++.+||+.||++|| ++.++++|-
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~ 254 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKEHP 254 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCc
Confidence 3467889999999999998 678887764
No 225
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.4e-36 Score=301.89 Aligned_cols=245 Identities=29% Similarity=0.422 Sum_probs=192.8
Q ss_pred ceeccccCccEEEEEeC--C--CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEe
Q 039322 442 YCIGNGGHGSVYRAELP--S--GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
+.||+|+||.||+|... + +..||+|.+..... ....+++..|+++++++.|+||+++++++. .+..++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI---AAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccc---hHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEe
Confidence 36999999999999542 2 36899999876422 135667899999999999999999999876 4567999999
Q ss_pred ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 039322 518 LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 597 (708)
+++|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.......
T Consensus 77 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 77 APLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred CCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 99999999997544 479999999999999999999999 999999999999999999999999999986654332
Q ss_pred cccc---ccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 598 NWTE---FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 598 ~~~~---~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.... ..++..|+|||...+..++.++||||||+++|+|++ |..||....... ....+......+.+
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~-- 220 (257)
T cd05060 151 YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE--------VIAMLESGERLPRP-- 220 (257)
T ss_pred ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH--------HHHHHHcCCcCCCC--
Confidence 2211 223467999999988889999999999999999998 999986432110 11111111110111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 221 -~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~ 253 (257)
T cd05060 221 -EECPQEIYSIMLSCWKYRPEDRPTFSELESTFR 253 (257)
T ss_pred -CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 112245889999999999999999999999875
No 226
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.1e-36 Score=318.10 Aligned_cols=255 Identities=23% Similarity=0.289 Sum_probs=196.7
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||++.. .+++.||+|++.+.. .......+.+.+|..++..++|+||+++++++..++..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE-MLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-HhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence 4788999999999999999965 468899999986411 11123355688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred EecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999996532 3488999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCc-cccccccccccCcccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC----
Q 039322 595 ESSN-WTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD---- 664 (708)
Q Consensus 595 ~~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 664 (708)
.... .....|++.|+|||++.. ..++.++||||+||++|||++|+.||...... .....+..
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~--------~~~~~i~~~~~~ 226 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--------ETYGKIMNHKEH 226 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH--------HHHHHHHcCCCc
Confidence 3322 223468999999999863 45678999999999999999999998643211 11111111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCC--CCCCHHHHHHHhh
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPE--SRPTMKVVTQQVR 707 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~~l~ 707 (708)
..++... ...+..+.+++.+|+..+++ .||+++++++|-+
T Consensus 227 ~~~~~~~---~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 227 FQFPPDV---TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred ccCCCcc---CCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 0111111 11233567778887765444 3889999998754
No 227
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6.1e-36 Score=302.07 Aligned_cols=239 Identities=23% Similarity=0.385 Sum_probs=186.9
Q ss_pred eeccccCccEEEEEeCC-------------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 443 CIGNGGHGSVYRAELPS-------------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
.||+|+||.||+|.... ...|++|++... .......+.+|+.+++.++||||+++++++..+.
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS----HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 58999999999996532 225888987652 2334567888999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc-------EE
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE-------AH 582 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-------~k 582 (708)
..++||||+++|+|..++.... ..+++..+++++.||+.|++|||++ +++||||||+||+++.++. ++
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeE
Confidence 9999999999999999886533 3489999999999999999999999 9999999999999987654 89
Q ss_pred EeecccccccCCCCCccccccccccccCccccc-cCCCCcchhHHHHHHHHHHHH-hCCCCCCccccccccccccccccc
Q 039322 583 VADFGIAKFLKPESSNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 583 l~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
++|||.+...... ....++..|+|||.+. +..++.++||||||+++|||+ +|..||....... ..
T Consensus 153 l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---------~~ 219 (262)
T cd05077 153 LSDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE---------KE 219 (262)
T ss_pred eCCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH---------HH
Confidence 9999998754322 2345778899999876 456888999999999999998 5888876322110 00
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........... ....++.+++.+||+.||++||++.++++++.
T Consensus 220 ~~~~~~~~~~~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 220 RFYEGQCMLVT----PSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHhcCccCCC----CChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 11111111111 11235789999999999999999999999863
No 228
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3e-36 Score=316.43 Aligned_cols=256 Identities=21% Similarity=0.367 Sum_probs=197.8
Q ss_pred ccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHA 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~ 508 (708)
++|++.+.||+|+||.||+|.. .+++.||||+++... .......+.+|+.++.++ +|+||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC---ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 6899999999999999999953 357789999987532 123356788999999999 689999999988654
Q ss_pred -CeeEEEEEeccCCCHHHHhccccc-------------------------------------------------------
Q 039322 509 -RHSFLVYELLERGSLAAILSSDTA------------------------------------------------------- 532 (708)
Q Consensus 509 -~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 532 (708)
...++||||+++|+|.+++.....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 467899999999999999864320
Q ss_pred ---------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc--ccc
Q 039322 533 ---------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTE 601 (708)
Q Consensus 533 ---------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~ 601 (708)
...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++......... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 12368888999999999999999999 9999999999999999999999999999865332221 122
Q ss_pred ccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHH
Q 039322 602 FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS 680 (708)
Q Consensus 602 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (708)
..++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ...............+.. ...+
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~ 310 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPE 310 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-------HHHHHHHhccCCCCCCCC---CCHH
Confidence 335678999999988889999999999999999997 99998642211 001111111111111111 1235
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 681 IMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 681 l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+++.+||+.||++|||+.|++++|+
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~ 337 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLG 337 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 788899999999999999999999985
No 229
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.3e-36 Score=301.81 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=197.3
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe-eCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS-HARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~~~lv 514 (708)
.+|.+.+.||+|+||.||+|... |+.||+|.++.. ...+.+.+|+.++++++|++++++++++. .++..++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 57889999999999999999774 788999998642 22457889999999999999999999764 45678999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+++++|.+++..... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred EECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 999999999999975442 3478999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.. ....++..|+|||+..+..++.++||||||+++|||++ |+.||....... ....+.. ..... .
T Consensus 155 ~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~--------~~~~~~~-~~~~~--~ 220 (256)
T cd05082 155 TQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------VVPRVEK-GYKMD--A 220 (256)
T ss_pred cC---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHhc-CCCCC--C
Confidence 22 22334568999999988889999999999999999998 999986322110 0011100 00000 0
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 221 PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 1112345788999999999999999999999875
No 230
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.6e-36 Score=315.19 Aligned_cols=262 Identities=16% Similarity=0.227 Sum_probs=193.7
Q ss_pred ccceeccc--cCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 440 AQYCIGNG--GHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 440 ~~~~ig~G--~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
+..+||+| +|++||++.. .+|+.||+|.+..... .......+.+|+++++.++||||+++++++..++..++|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC--TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc--cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEe
Confidence 45679999 6789999954 5789999999875321 12334567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+++|+|.+++..+.. ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.++++||+.+.......
T Consensus 80 ~~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 80 FMAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred ccCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 9999999999965432 3488999999999999999999999 99999999999999999999999998654332111
Q ss_pred C-------ccccccccccccCcccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc-----
Q 039322 597 S-------NWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI----- 662 (708)
Q Consensus 597 ~-------~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~----- 662 (708)
. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||....................
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTT 235 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccc
Confidence 1 1122346778999999876 3588999999999999999999999974321100000000000000
Q ss_pred --------------cCCCC---------CC------CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 663 --------------LDPRL---------PP------PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 663 --------------~~~~~---------~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+... .+ ...........+.+++.+||+.||++|||++|++++-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~ 309 (327)
T cd08227 236 IPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309 (327)
T ss_pred hhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence 00000 00 00011122346889999999999999999999998643
No 231
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5.9e-36 Score=303.75 Aligned_cols=253 Identities=25% Similarity=0.335 Sum_probs=189.0
Q ss_pred ceeccccCccEEEEEeCC---CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEec
Q 039322 442 YCIGNGGHGSVYRAELPS---GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELL 518 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~ 518 (708)
+.||+|+||.||+|...+ +..+|+|.++... .......+.+|+.++++++||||+++++++.+....++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA---SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECC
Confidence 358999999999996543 4579999887532 1233457889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccccc--ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 519 ERGSLAAILSSDTA--AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 519 ~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
++|+|.+++..... ....++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcc
Confidence 99999999975432 23457788889999999999999999 99999999999999999999999999997543222
Q ss_pred Cc--cccccccccccCccccccC-------CCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC
Q 039322 597 SN--WTEFAGTYGYVAPELAYTM-------KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 597 ~~--~~~~~~~~~y~aPE~~~~~-------~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
.. .....++..|+|||++.+. .++.++||||||+++|||++ |+.||......................+.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR 234 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence 11 1234567889999987642 35779999999999999996 99998643211100000000000111111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ......+.+++.+|| .+|++|||++||.+.|.
T Consensus 235 ~~------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 235 LK------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cC------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11 111234677888999 58999999999998874
No 232
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.3e-36 Score=311.98 Aligned_cols=263 Identities=17% Similarity=0.227 Sum_probs=199.6
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.+.+.||+|+||.||+|... +++.||+|.++.... ......+.+|++++++++|+||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE---EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc---cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 67899999999999999999654 688999999875321 12244577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+. ++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 83 ~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 156 (301)
T cd07873 83 FEYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 156 (301)
T ss_pred Eeccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence 99997 58998886543 3478999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------ccccccccc-----
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------LNTDIALDE----- 661 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~~~~~~~~~----- 661 (708)
.........+++.|+|||.+.+. .++.++||||||+++|||++|+.||.......... .........
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 157 PTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred CCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence 33333445678899999987654 47889999999999999999999997432110000 000000000
Q ss_pred -ccCCCCCCCC-----chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 -ILDPRLPPPS-----RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 -~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+... .........+.+++.+|++.||.+|||++|+++|-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~ 288 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 0000000000 000112335789999999999999999999998754
No 233
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.2e-36 Score=308.06 Aligned_cols=262 Identities=24% Similarity=0.376 Sum_probs=204.0
Q ss_pred hHHHHHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEE
Q 039322 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGF 504 (708)
Q Consensus 427 ~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~ 504 (708)
+..++..+.+.|++.+.||+|+||.||+|.. .+++.||+|.+... .....++..|+.+++++ +|+||++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~ 81 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----EDEEEEIKLEINMLKKYSHHRNIATYYGA 81 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-----hHHHHHHHHHHHHHHHhcCCCcEEEEeee
Confidence 3445555678999999999999999999965 46889999998642 12345678899999998 69999999999
Q ss_pred Eee------CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC
Q 039322 505 CSH------ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE 578 (708)
Q Consensus 505 ~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 578 (708)
+.. .+..+++|||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +++|+||+|+||+++.+
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred hhcccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 853 457899999999999999986543 23478888999999999999999999 99999999999999999
Q ss_pred CcEEEeecccccccCCCCCccccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc
Q 039322 579 YEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL 653 (708)
Q Consensus 579 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~ 653 (708)
+.++|+|||++..............++..|+|||.+. ...++.++||||||+++|||++|+.||.......
T Consensus 158 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~---- 233 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR---- 233 (282)
T ss_pred CCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh----
Confidence 9999999999876543333334456889999999875 3457789999999999999999999986322110
Q ss_pred ccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......... ........+..+.+++.+||+.||.+|||+.|++++=+
T Consensus 234 ----~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~ 281 (282)
T cd06636 234 ----ALFLIPRNPP--PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPF 281 (282)
T ss_pred ----hhhhHhhCCC--CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence 0001111111 10111123446889999999999999999999998754
No 234
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-36 Score=310.07 Aligned_cols=259 Identities=26% Similarity=0.382 Sum_probs=203.5
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||+||+|.. .+|+.||+|++.... .....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 6788899999999999999965 468899999876531 123467789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++...+ .+++..+..++.+++.|+.|||+.+ +++||||+|+||+++.++.++|+|||++.....
T Consensus 82 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~ 156 (284)
T cd06620 82 MEFMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN 156 (284)
T ss_pred EecCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhh
Confidence 99999999999986543 4899999999999999999999742 899999999999999999999999999865432
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccc---ccccccccCCCCCCCC
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNT---DIALDEILDPRLPPPS 671 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 671 (708)
. ......++..|+|||++.++.++.++|||||||++|+|++|+.||+............ ............+..
T Consensus 157 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (284)
T cd06620 157 S--IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL- 233 (284)
T ss_pred h--ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCC-
Confidence 2 1223568899999999988889999999999999999999999997432211000000 011112221111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.....+..+.+++.+||++||++|||++|++++.
T Consensus 234 -~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 234 -PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred -CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0112334688999999999999999999999874
No 235
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.6e-36 Score=308.74 Aligned_cols=263 Identities=25% Similarity=0.327 Sum_probs=194.1
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc---cCCceeeEEEEEee-----
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI---RHRNIVKFYGFCSH----- 507 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~iv~l~~~~~~----- 507 (708)
+|++.+.||+|+||.||+|... +++.||+|.++...... .....+.+|+++++.+ +||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~ 78 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED--GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR 78 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC--CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence 4788899999999999999654 68899999987532211 1123455677766655 69999999998864
Q ss_pred CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
....++||||+.+ +|.+++..... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||
T Consensus 79 ~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 79 ETKVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred CceEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccC
Confidence 3457999999985 89888865432 4489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------ccccccc-
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------LNTDIAL- 659 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~~~~~~~- 659 (708)
++...... .......++..|+|||++.+..++.++||||+||++|+|++|+.||.......... .......
T Consensus 154 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 154 LARIYSCQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred ccccccCc-ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 99865432 22234567899999999988889999999999999999999999986432110000 0000000
Q ss_pred ------ccccCCCCCCC-CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 660 ------DEILDPRLPPP-SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 660 ------~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+..... ..........+.+++.+|+++||++|||+.|+++|-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~ 287 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 00000000000 0011122345789999999999999999999998754
No 236
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.5e-36 Score=309.25 Aligned_cols=263 Identities=25% Similarity=0.367 Sum_probs=203.8
Q ss_pred HHHHHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 039322 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC 505 (708)
Q Consensus 428 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~ 505 (708)
++++..++++|.+.+.||+|+||.||+|.. .+++.+|+|.+.... ...+.+.+|+.+++++ +|||++++++++
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 345556778999999999999999999965 468899999986421 2245677899999998 799999999998
Q ss_pred eeC-----CeeEEEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC
Q 039322 506 SHA-----RHSFLVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY 579 (708)
Q Consensus 506 ~~~-----~~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 579 (708)
... +..++||||+++|+|.++++... ....+++..++.++.|++.||+|||+. +++||||||+||+++.++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 754 35899999999999999886422 234589999999999999999999998 999999999999999999
Q ss_pred cEEEeecccccccCCCCCccccccccccccCccccccCC-----CCcchhHHHHHHHHHHHHhCCCCCCccccccccccc
Q 039322 580 EAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-----ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN 654 (708)
Q Consensus 580 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~ 654 (708)
.+||+|||++..............++..|+|||.+.... ++.++||||+|+++|||++|+.||......
T Consensus 166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~------ 239 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV------ 239 (291)
T ss_pred CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH------
Confidence 999999999986654333334456788999999875433 578999999999999999999998642211
Q ss_pred cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+..... +...........+.+++.+||+.+|++||++.|+++|=+
T Consensus 240 --~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~ 289 (291)
T cd06639 240 --KTLFKIPRNPP-PTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPF 289 (291)
T ss_pred --HHHHHHhcCCC-CCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcc
Confidence 01111111100 000011122345889999999999999999999998754
No 237
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.1e-36 Score=319.42 Aligned_cols=262 Identities=21% Similarity=0.281 Sum_probs=198.2
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC----
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA---- 508 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~---- 508 (708)
..++|.+.+.||+|+||.||+|.. ..++.||||++..... .......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc--CchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence 357899999999999999999964 4688999999875332 223456788899999999999999999987543
Q ss_pred --CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 509 --RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 509 --~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
...|+||||+++ ++.+++.. .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeC
Confidence 357999999975 77777642 378899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------c----
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------T---- 655 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------~---- 655 (708)
|+++..... .......++..|+|||++.+..++.++|||||||++|||++|+.||............ .
T Consensus 171 G~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 171 GLARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred CCccccCCC-CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 999865432 2223457899999999999989999999999999999999999999743211000000 0
Q ss_pred ---ccccccccCC--------------C--CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 656 ---DIALDEILDP--------------R--LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 656 ---~~~~~~~~~~--------------~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......... . .+............+.+++.+|++.||++|||+.|+++|-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~ 320 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 0000000000 0 00000000111235789999999999999999999998754
No 238
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.5e-36 Score=304.40 Aligned_cols=239 Identities=21% Similarity=0.356 Sum_probs=185.5
Q ss_pred eeccccCccEEEEEeCC-------------------------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc
Q 039322 443 CIGNGGHGSVYRAELPS-------------------------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~ 497 (708)
.||+|+||.||+|.... ...||+|++... .......+.+|+.++++++|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS----HRDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH----HHHHHHHHHHHHHHHhcCCCCC
Confidence 58999999999996421 135888987642 2233567888999999999999
Q ss_pred eeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 039322 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 498 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 577 (708)
|+++++++..+...++||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +++||||||+||+++.
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~ 152 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLAR 152 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEec
Confidence 9999999999999999999999999999986533 3578999999999999999999999 9999999999999976
Q ss_pred CC-------cEEEeecccccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHH-hCCCCCCccccc
Q 039322 578 EY-------EAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAI-KGKHPRDFLSLI 648 (708)
Q Consensus 578 ~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell-tg~~p~~~~~~~ 648 (708)
.+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||......
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred cCcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 43 3899999988644322 22356788999998865 55789999999999999995 699998643211
Q ss_pred cccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 649 SSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ...........+... ...+.+++.+||+.+|++|||+.++++.|.
T Consensus 229 ~---------~~~~~~~~~~~~~~~----~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 229 E---------KERFYEKKHRLPEPS----CKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H---------HHHHHHhccCCCCCC----ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1 011111111111111 124788999999999999999999999873
No 239
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7.8e-36 Score=305.39 Aligned_cols=261 Identities=20% Similarity=0.339 Sum_probs=199.6
Q ss_pred ccccccceeccccCccEEEEEe-----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA-- 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-- 508 (708)
.-|++.+.||+|+||.||.+.. .+++.||+|.++... .......+.+|++++++++|||++++.+++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 4578889999999999999963 357889999987532 223456799999999999999999999998775
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
...++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++.++|+|||+
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~ 155 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 155 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcc
Confidence 56889999999999999986543 3479999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-------ccccccccc
Q 039322 589 AKFLKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLIS-------SSSLNTDIA 658 (708)
Q Consensus 589 a~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~-------~~~~~~~~~ 658 (708)
++........ .....++..|+|||++.+..++.++||||||+++|||+++..|+....... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 156 TKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 9866433221 123446678999999988889999999999999999999877643211000 000000000
Q ss_pred cccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+....+.. ...+..+.+++.+||+.+|++|||++++++.++
T Consensus 236 ~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 281 (284)
T cd05079 236 VRVLEEGKRLPRP---PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFE 281 (284)
T ss_pred HHHHHcCccCCCC---CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 0111111111111 112346889999999999999999999999875
No 240
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.1e-36 Score=323.51 Aligned_cols=256 Identities=21% Similarity=0.245 Sum_probs=193.9
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
..|.+.+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+||+++++++..++..++|
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY----------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc----------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 46999999999999999999664 578899996432 2356799999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||++. ++|.+++.... ..+++.+++.++.|++.||+|||++ ||+||||||+|||++.++.+||+|||+++....
T Consensus 239 ~e~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 239 LPKYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EEccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 99995 68988886432 3589999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC-----CCC
Q 039322 595 ESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD-----PRL 667 (708)
Q Consensus 595 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 667 (708)
.... .....||..|+|||++.+..++.++|||||||++|||++|..|+-................+.+.. ..+
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 392 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEF 392 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccC
Confidence 2221 223568999999999999899999999999999999999876542111000000000000000000 000
Q ss_pred C----------------------CCCchhH---HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 P----------------------PPSRSVQ---EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~----------------------~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+ .....+. .....+.+++.+||+.||++|||+.|+++|-+
T Consensus 393 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~ 457 (461)
T PHA03211 393 PQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL 457 (461)
T ss_pred CCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence 0 0000011 11235778999999999999999999999854
No 241
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.2e-36 Score=312.04 Aligned_cols=255 Identities=22% Similarity=0.371 Sum_probs=200.4
Q ss_pred ccccccceeccccCccEEEEEeC--------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP--------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCS 506 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~ 506 (708)
.+|.+.+.||+|+||.||+|... .+..||+|.++... .....+++.+|+++++++ +|+||+++++++.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 46889999999999999999642 12368999887532 223456889999999999 7999999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccc-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCe
Q 039322 507 HARHSFLVYELLERGSLAAILSSDT-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNL 573 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Ni 573 (708)
.++..++++||+++|+|.+++.... ....+++.++..++.|++.||+|||++ |++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceE
Confidence 9999999999999999999996532 223578999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEeecccccccCCCCCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccc
Q 039322 574 LLDLEYEAHVADFGIAKFLKPESSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISS 650 (708)
Q Consensus 574 ll~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~ 650 (708)
+++.++.+||+|||+++......... ....++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--- 242 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--- 242 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH---
Confidence 99999999999999998654322211 12233567999999998889999999999999999998 8888863221
Q ss_pred cccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 651 SSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+........+. .....+.+++.+||+.+|++|||+.|+++.|+
T Consensus 243 -----~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~ 291 (334)
T cd05100 243 -----EELFKLLKEGHRMDKPA---NCTHELYMIMRECWHAVPSQRPTFKQLVEDLD 291 (334)
T ss_pred -----HHHHHHHHcCCCCCCCC---CCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 11111111111111111 12335889999999999999999999999875
No 242
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=8.1e-36 Score=301.12 Aligned_cols=252 Identities=21% Similarity=0.399 Sum_probs=201.6
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|+||.||+|...++..+|+|.+... ....+.+.+|++++++++|+||+++.+++.+ +..+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 78 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence 4789999999999999999998777888999988752 1235678899999999999999999999887 778999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... ...+++.++..++.|++.||+|||+. |++|+||+|+||+++.++.+||+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 79 TEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EEeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 99999999999997643 24578899999999999999999998 999999999999999999999999999976543
Q ss_pred CCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 595 ESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 595 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.... .....++..|+|||++....++.++|+||||+++|+++| |+.||...... .....+.. ....+
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~-~~~~~-- 223 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIRALER-GYRMP-- 223 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHhC-CCCCC--
Confidence 2211 122345678999999988889999999999999999999 89998642211 00111111 11100
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+..+.+++.+||+.+|++||++.++.+.|+
T Consensus 224 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 224 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 01122345889999999999999999999998875
No 243
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.7e-36 Score=311.12 Aligned_cols=249 Identities=26% Similarity=0.388 Sum_probs=199.2
Q ss_pred ccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|.....||+|+||.||++.. .+++.||||.+... .....+.+.+|+.+++.++|+||+++++.+..++..++|||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR----KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc----hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence 44446699999999999965 46889999998642 23445678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+++++|.+++... .+++.++..++.|++.|++|||++ +++||||||+||+++.++.++|+|||++.......
T Consensus 100 ~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~ 172 (292)
T cd06658 100 FLEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 172 (292)
T ss_pred CCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence 99999999988542 378999999999999999999999 99999999999999999999999999987654333
Q ss_pred CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHH
Q 039322 597 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (708)
.......++..|+|||...+..++.++||||||+++|||++|+.||........ .........+.... ...
T Consensus 173 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~----~~~ 243 (292)
T cd06658 173 PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-----MRRIRDNLPPRVKD----SHK 243 (292)
T ss_pred ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhcCCCcccc----ccc
Confidence 333445688999999999888899999999999999999999999864321110 00111111111111 111
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 677 KLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 677 ~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
....+.+++.+||..||++|||++|++++-
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~~ 273 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQHP 273 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 233577889999999999999999999873
No 244
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5e-37 Score=283.48 Aligned_cols=253 Identities=22% Similarity=0.361 Sum_probs=201.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~l 513 (708)
++.+....||.|..|.|++++.. +|...|||.+++. .+.++.+++...++++..-. +|.||+.+|||..+...++
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt---~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I 168 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT---GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI 168 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc---CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence 55667778999999999999765 5899999999874 45567888999999876664 9999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
.||.|.. ..+..++.-. +++++.-+-++...++.||.||.++| +|+|||+||+|||+|+.|++|+||||.+.++.
T Consensus 169 cMelMs~-C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlv 243 (391)
T KOG0983|consen 169 CMELMST-CAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLV 243 (391)
T ss_pred HHHHHHH-HHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceee
Confidence 9999854 5566654333 45788888899999999999999997 99999999999999999999999999998775
Q ss_pred CCCCccccccccccccCcccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 594 PESSNWTEFAGTYGYVAPELAYT---MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
+. ...+..+|-+.|||||.+.- ..|+.++||||||+.++||.||+.||.... ...+.+..+.+...+ .
T Consensus 244 dS-kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~-------tdFe~ltkvln~ePP-~ 314 (391)
T KOG0983|consen 244 DS-KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK-------TDFEVLTKVLNEEPP-L 314 (391)
T ss_pred cc-cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC-------ccHHHHHHHHhcCCC-C
Confidence 43 33355678899999998864 358889999999999999999999997421 122333344442221 1
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
-.........+.+++..|+.+|+.+||.+.++++|
T Consensus 315 L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 315 LPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11111134568889999999999999999999986
No 245
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=6.8e-36 Score=306.92 Aligned_cols=251 Identities=27% Similarity=0.410 Sum_probs=203.5
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|.+.+.||+|+||.||+|.. .+++.||+|.+... .....+.+..|+.++++++||||+++++++..++..++|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ----QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc----cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 6889999999999999999964 46889999998642 223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+++++|.+++... .+++.++..++.|++.|++|||+. |++|+||+|+||+++.++.++|+|||++....+
T Consensus 95 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 95 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (293)
T ss_pred EecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence 9999999999998653 378899999999999999999999 999999999999999999999999999876654
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........+++.|+|||.+....++.++||||||+++|++++|+.||....... ......... .+.....
T Consensus 168 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~--------~~~~~~~~~-~~~~~~~ 238 (293)
T cd06647 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--------ALYLIATNG-TPELQNP 238 (293)
T ss_pred cccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh--------heeehhcCC-CCCCCCc
Confidence 4444444568889999999988888999999999999999999999987432110 000010000 0111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
......+.+++.+||+.+|++||++++++.|-
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 239 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 12334588899999999999999999999873
No 246
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6e-36 Score=311.46 Aligned_cols=194 Identities=21% Similarity=0.354 Sum_probs=159.3
Q ss_pred cceeccccCccEEEEEeC---CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee--CCeeEEEE
Q 039322 441 QYCIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH--ARHSFLVY 515 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~ 515 (708)
.+.||+|+||.||+|... +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...+++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC------CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEE
Confidence 457999999999999754 46789999987531 13446789999999999999999999854 45688999
Q ss_pred EeccCCCHHHHhcccc------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee----CCCCcEEEee
Q 039322 516 ELLERGSLAAILSSDT------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL----DLEYEAHVAD 585 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl~D 585 (708)
||+.+ +|.+++.... ....+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 80 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 99865 8888875332 123488999999999999999999999 99999999999999 4567899999
Q ss_pred cccccccCCCCC---ccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCc
Q 039322 586 FGIAKFLKPESS---NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDF 644 (708)
Q Consensus 586 fg~a~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~ 644 (708)
||+++....... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 999987643321 22345789999999988764 578899999999999999999999963
No 247
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4e-36 Score=308.12 Aligned_cols=264 Identities=22% Similarity=0.333 Sum_probs=201.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|+..+.||+|++|.||+|... +|+.||+|.+..... .....+.+.+|++++++++|+|++++++++..++..++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED--DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc--CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEE
Confidence 36888899999999999999765 689999999865321 112345678999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||++++++..++... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 79 FEYCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred EeccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 9999998888876543 2489999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc--------c--------ccc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL--------N--------TDI 657 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~--------~--------~~~ 657 (708)
.........++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||........... . ...
T Consensus 153 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07847 153 PGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ 232 (286)
T ss_pred CcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccc
Confidence 4433344567889999998876 4578899999999999999999999864321100000 0 000
Q ss_pred ccccccCCCCCCCC---chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPS---RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+...... .........+.+++.+||+.+|++||++.|+++|-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~ 285 (286)
T cd07847 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285 (286)
T ss_pred ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCC
Confidence 00000000000000 001122356889999999999999999999998743
No 248
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.8e-36 Score=306.38 Aligned_cols=258 Identities=28% Similarity=0.418 Sum_probs=203.6
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCC--
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHAR-- 509 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~-- 509 (708)
++++|++.+.||+|++|.||+|..+ +++.+++|++.... ...+.+.+|+++++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 5689999999999999999999764 67899999987531 2356789999999999 6999999999997644
Q ss_pred ----eeEEEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEe
Q 039322 510 ----HSFLVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVA 584 (708)
Q Consensus 510 ----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 584 (708)
..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 79 GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEEC
Confidence 4899999999999999986532 234589999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCccccccccccccCcccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 039322 585 DFGIAKFLKPESSNWTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659 (708)
Q Consensus 585 Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 659 (708)
|||.+..............++..|+|||++.. ..++.++||||||+++|+|++|+.||...... ...
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~ 227 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM--------RAL 227 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH--------HHH
Confidence 99999866543333445668899999998753 34677899999999999999999998632211 111
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
..+.... .+...........+.+++.+||+.||++|||++|++++=++
T Consensus 228 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 228 FKIPRNP-PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHhhccC-CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 1111111 11111112234568899999999999999999999987543
No 249
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-37 Score=315.41 Aligned_cols=246 Identities=26% Similarity=0.378 Sum_probs=198.7
Q ss_pred eeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCC
Q 039322 443 CIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERG 521 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g 521 (708)
++|+|.||+||.|+.. +...+|||-+.. .+....+-+.+|+...++++|+|||+++|.+.+++..-|.||-++||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpe----kdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPE----KDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccc----ccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 6999999999999765 456799998765 23345567889999999999999999999999999999999999999
Q ss_pred CHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-CCCcEEEeecccccccCCCCCccc
Q 039322 522 SLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD-LEYEAHVADFGIAKFLKPESSNWT 600 (708)
Q Consensus 522 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~ 600 (708)
+|.+.+...-..-+-.+.++-.+.+||.+||.|||++ .|||||||-+|||+. -.|.+||+|||-++....-+....
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TE 734 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTE 734 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCcccc
Confidence 9999997655333337788889999999999999999 999999999999994 579999999999988776666667
Q ss_pred cccccccccCccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHH
Q 039322 601 EFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKL 678 (708)
Q Consensus 601 ~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (708)
...||..|||||++..++ |+.++|||||||.+.||.||++||-..+.... ..++.-+...-++- +.+..
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA------AMFkVGmyKvHP~i---Peels 805 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA------AMFKVGMYKVHPPI---PEELS 805 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH------hhhhhcceecCCCC---cHHHH
Confidence 789999999999998764 78899999999999999999999864332111 11111111112222 22333
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHH
Q 039322 679 ISIMEVAFSCLNESPESRPTMKVVTQ 704 (708)
Q Consensus 679 ~~l~~li~~cl~~dP~~RPs~~evl~ 704 (708)
.+...+|.+|+.+||.+||++.++++
T Consensus 806 aeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHhcc
Confidence 45677888999999999999999986
No 250
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.3e-36 Score=310.96 Aligned_cols=249 Identities=25% Similarity=0.409 Sum_probs=198.4
Q ss_pred ccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|+....||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++|||++++++++..++..++|+|
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc----cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence 44455799999999999965 468999999986421 2235668899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+++++|.+++.. ..+++..++.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~ 171 (297)
T cd06659 99 FLQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 171 (297)
T ss_pred cCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc
Confidence 9999999998754 2378999999999999999999999 99999999999999999999999999987654443
Q ss_pred CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHH
Q 039322 597 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (708)
.......++..|+|||++.+..++.++||||||+++|||++|+.||....... ....+.. ...........
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~-~~~~~~~~~~~ 242 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--------AMKRLRD-SPPPKLKNAHK 242 (297)
T ss_pred ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhc-cCCCCccccCC
Confidence 33344668899999999988889999999999999999999999986322111 0111100 00000011111
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 677 KLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 677 ~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
....+.+++.+||+.+|++||++++++++-
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~ 272 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLDHP 272 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence 233578899999999999999999999863
No 251
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.6e-35 Score=297.31 Aligned_cols=247 Identities=26% Similarity=0.429 Sum_probs=196.8
Q ss_pred ceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCC
Q 039322 442 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERG 521 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g 521 (708)
+.||+|++|.||+|...+++.||+|.+..... ....+.+.+|++++++++|+||+++++++...+..++||||++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP---PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 36899999999999876699999999876432 135678999999999999999999999999999999999999999
Q ss_pred CHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc--
Q 039322 522 SLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW-- 599 (708)
Q Consensus 522 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-- 599 (708)
+|.+++.... ..+++..+..++.+++.|++|||++ +++||||+|+||+++.++.+||+|||++..........
T Consensus 78 ~l~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (251)
T cd05041 78 SLLTFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152 (251)
T ss_pred cHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence 9999996543 3478899999999999999999999 99999999999999999999999999997654222111
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCchhHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKL 678 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (708)
.....+..|+|||.+.++.++.++|+||||+++|||+| |..||........ ....... .....+ ...+
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~-----~~~~~~~--~~~~~~----~~~~ 221 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT-----RERIESG--YRMPAP----QLCP 221 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH-----HHHHhcC--CCCCCC----ccCC
Confidence 11233567999999988889999999999999999999 8888863221100 0001000 011111 1123
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 679 ISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 679 ~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 45888999999999999999999999886
No 252
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=6.1e-36 Score=303.70 Aligned_cols=248 Identities=28% Similarity=0.369 Sum_probs=186.5
Q ss_pred eeccccCccEEEEEeCC---CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 443 CIGNGGHGSVYRAELPS---GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
.||+|+||.||+|...+ ...+|+|.+.... .......+.+|++.++.++|+||+++++++...+..++||||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA---TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC---ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 58999999999996543 3468888876422 22345678899999999999999999999999999999999999
Q ss_pred CCCHHHHhccccc--ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 039322 520 RGSLAAILSSDTA--AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597 (708)
Q Consensus 520 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 597 (708)
+|+|.+++..... ....++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchh
Confidence 9999999976542 22346788899999999999999999 999999999999999999999999999875433221
Q ss_pred c--cccccccccccCcccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccc-c--C
Q 039322 598 N--WTEFAGTYGYVAPELAYT-------MKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEI-L--D 664 (708)
Q Consensus 598 ~--~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~-~--~ 664 (708)
. .....++..|+|||+... ..++.++||||+|+++|||++ |..||...... ...... . .
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--------~~~~~~~~~~~ 227 (269)
T cd05042 156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE--------QVLKQVVREQD 227 (269)
T ss_pred eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH--------HHHHHHhhccC
Confidence 1 122345678999998643 346789999999999999999 78887633211 001110 0 0
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
..++.+ .........+.+++..|| .||++|||++||++.|
T Consensus 228 ~~~~~~-~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 228 IKLPKP-QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred ccCCCC-cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 111111 111122344667788898 5999999999999876
No 253
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=316.01 Aligned_cols=254 Identities=25% Similarity=0.372 Sum_probs=206.6
Q ss_pred ccccccceeccccCccEEEEEeCCC-cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSG-QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+-|.+...||.|+||.||+|..++. -..|.|++.. ...++.+.++-|++||..+.||+||++++.|..++.+|+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet----kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET----KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc----cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEE
Confidence 3567788899999999999976643 3455677654 3446788899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
.|||.||-.+..+-.-+ ..+++.++.-+++|++.||.|||++ .|||||||+.|||++-+|.++|+|||.+.....
T Consensus 108 iEFC~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS 182 (1187)
T ss_pred EeecCCchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh
Confidence 99999999988875433 5589999999999999999999999 999999999999999999999999999876544
Q ss_pred CCCccccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 595 ESSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
.......+.||+.|||||+.. ..+|+.++||||||+.+.||..+.+|-..... ...+-.+.. .-++
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp--------MRVllKiaK-SePP 253 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAK-SEPP 253 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch--------HHHHHHHhh-cCCC
Confidence 444566789999999999864 35789999999999999999999999542211 111111111 1122
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+..+...+.+++++|+.+||..||+++++++|-+
T Consensus 254 TLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpf 291 (1187)
T KOG0579|consen 254 TLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPF 291 (1187)
T ss_pred cccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcc
Confidence 22234456677999999999999999999999999854
No 254
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.5e-35 Score=300.96 Aligned_cols=247 Identities=24% Similarity=0.382 Sum_probs=191.1
Q ss_pred eeccccCccEEEEEeCC-Cc--EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEEEec
Q 039322 443 CIGNGGHGSVYRAELPS-GQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVYELL 518 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~ 518 (708)
.||+|+||.||+|...+ +. .+++|.++... .....+.+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC---CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 58999999999997643 43 46888876421 223456788999999999 7999999999999999999999999
Q ss_pred cCCCHHHHhcccc-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 519 ERGSLAAILSSDT-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 519 ~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
++|+|.+++.... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECC
Confidence 9999999996543 123478999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILD 664 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 664 (708)
||++...... ........+..|+|||++....++.++||||||+++|||++ |..||...... .....+..
T Consensus 156 fgl~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~~~~ 226 (270)
T cd05047 156 FGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEKLPQ 226 (270)
T ss_pred CCCccccchh-hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--------HHHHHHhC
Confidence 9998632211 11112233567999999988889999999999999999997 99998632211 11111111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........ .....+.+++.+||+.+|.+|||+.|+++.|+
T Consensus 227 ~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 266 (270)
T cd05047 227 GYRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 266 (270)
T ss_pred CCCCCCCC---cCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 10000111 12235789999999999999999999999874
No 255
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=8.5e-36 Score=302.09 Aligned_cols=253 Identities=23% Similarity=0.344 Sum_probs=196.2
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCc-chhHhHHHHHHHHHHHHhccCCceeeEEEEEee--CCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPC-DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH--ARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~--~~~~ 511 (708)
.+|...+.||+|+||.||+|.. .+++.||+|.+...... ........+.+|+.++++++||||+++++++.+ .+..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688899999999999999965 46889999998653221 122345678899999999999999999999875 3577
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++++||+++++|.+++.... .+++...+.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999996543 378899999999999999999998 999999999999999999999999999875
Q ss_pred cCCCC---CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 592 LKPES---SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 592 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
..... .......++..|+|||.+.+..++.++||||+|+++|||++|+.||...... ............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~--------~~~~~~~~~~~~ 227 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM--------AAIFKIATQPTN 227 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH--------HHHHHHhcCCCC
Confidence 53211 1122345788999999998888999999999999999999999998732211 101111100000
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
+ .........+.+++ +||..+|++||+++|+++|
T Consensus 228 ~--~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 228 P--QLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred C--CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 0 11111223456666 7888999999999999986
No 256
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.7e-36 Score=316.61 Aligned_cols=257 Identities=21% Similarity=0.273 Sum_probs=198.9
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.+.+.||+|+||.||++... +++.||+|.+.+.. .........+.+|..++..++|++|+++++++.+++..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE-MLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-HHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 47889999999999999999654 67889999986421 11123345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred EeCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999997532 3478899999999999999999999 999999999999999999999999999986654
Q ss_pred CCCc-cccccccccccCcccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC--C
Q 039322 595 ESSN-WTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP--R 666 (708)
Q Consensus 595 ~~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 666 (708)
.... .....|++.|+|||++.+ +.++.++||||+|+++|||++|+.||...... .....+... +
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~ 226 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV--------ETYGKIMNHEER 226 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH--------HHHHHHHcCCCc
Confidence 3322 223568999999998865 45788999999999999999999999643211 111111111 1
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPES--RPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~ 707 (708)
.+.+ ......+..+.+++.+|+..++++ |++++++++|-+
T Consensus 227 ~~~p-~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~ 268 (331)
T cd05624 227 FQFP-SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAF 268 (331)
T ss_pred ccCC-CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence 1111 111122345778888999876655 568999987743
No 257
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-35 Score=304.92 Aligned_cols=261 Identities=26% Similarity=0.329 Sum_probs=201.9
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--CeeE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHSF 512 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~~ 512 (708)
++|+..+.||.|++|.||+|.. .+++.+|+|.+.... ......++.+|++++++++||||+++++++... +..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP---NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC---chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEE
Confidence 3678889999999999999976 468899999987532 224467789999999999999999999998653 4789
Q ss_pred EEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 513 LVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
+||||+++++|.+++.... ....++...+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 154 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGE 154 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccc
Confidence 9999999999999875322 234578899999999999999999999 999999999999999999999999999875
Q ss_pred cCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC---CCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD---PRLP 668 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 668 (708)
..... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||+...... ...........+ +.+.
T Consensus 155 ~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd06621 155 LVNSL--AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP---LGPIELLSYIVNMPNPELK 229 (287)
T ss_pred ccccc--cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC---CChHHHHHHHhcCCchhhc
Confidence 43221 123456789999999988889999999999999999999999987442200 000111111111 1111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
............+.+++.+||+.+|++|||+.|++++-+
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~ 268 (287)
T cd06621 230 DEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW 268 (287)
T ss_pred cCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence 111111123456889999999999999999999998754
No 258
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1e-35 Score=301.34 Aligned_cols=253 Identities=25% Similarity=0.374 Sum_probs=203.5
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee--CCeeEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH--ARHSFL 513 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~--~~~~~l 513 (708)
+|++.+.||.|+||.||+|.. .+++.||+|.+..... .....+++..|++++++++|+||+++++++.. +...++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM--TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEE
Confidence 477889999999999999954 5688999999865321 23446678899999999999999999998864 456799
Q ss_pred EEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 514 VYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLH-----HDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh-----~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
+|||+++++|.+++.... ....+++..++.++.|++.|++||| +. +++|+||+|+||+++.++.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccc
Confidence 999999999999996542 2346899999999999999999999 76 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
++..............++..|+|||.+.+..++.++||||||+++|+|++|+.||+.... ....+.+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~ 227 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--------LQLASKIKEGKF 227 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--------HHHHHHHhcCCC
Confidence 998765544333445688999999999988899999999999999999999999874321 111112222222
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
+..+ ......+.+++.+|++.+|++||++.+|+++
T Consensus 228 ~~~~---~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 RRIP---YRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCCc---cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1111 1233468899999999999999999999986
No 259
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.3e-35 Score=300.14 Aligned_cols=247 Identities=26% Similarity=0.391 Sum_probs=189.6
Q ss_pred ceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe-eCCeeEEEEE
Q 039322 442 YCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS-HARHSFLVYE 516 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~~~lv~e 516 (708)
+.||+|+||.||+|... ++..||+|.+... ......+.+.+|+.+++.++||||+++++++. .++..++|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI---TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc---CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEe
Confidence 35899999999999653 2457999987542 22344677889999999999999999999875 4556889999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+.+|+|.+++.... ...++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 78 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~ 152 (262)
T cd05058 78 YMKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152 (262)
T ss_pred cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCc
Confidence 999999999996543 3367788899999999999999998 99999999999999999999999999997553221
Q ss_pred C----ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhC-CCCCCccccccccccccccccccccCCCCCCCC
Q 039322 597 S----NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKG-KHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 597 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
. ......++..|+|||...+..++.++||||||+++|||++| ..||..... ................
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 224 (262)
T cd05058 153 YYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--------FDITVYLLQGRRLLQP 224 (262)
T ss_pred ceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHhcCCCCCCC
Confidence 1 11123456789999999888899999999999999999995 556653211 1111112221111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .+..+.+++.+||+.+|++||++.|+++.|+
T Consensus 225 ~~---~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 225 EY---CPDPLYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred Cc---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11 1235889999999999999999999999874
No 260
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.4e-36 Score=329.02 Aligned_cols=265 Identities=17% Similarity=0.240 Sum_probs=193.3
Q ss_pred HHHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC------CceeeEE
Q 039322 430 EIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH------RNIVKFY 502 (708)
Q Consensus 430 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~l~ 502 (708)
++....++|++.+.||+|+||.||+|.. ..++.||||+++... .....+..|+++++.++| .++++++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~ 197 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQ 197 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHHHHHHHHHHHHHhhcCcccCcceeeeE
Confidence 3444568899999999999999999965 467889999986421 223345567777777654 4589999
Q ss_pred EEEeeC-CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC--
Q 039322 503 GFCSHA-RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-- 579 (708)
Q Consensus 503 ~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-- 579 (708)
+++..+ ++.++|||++ +++|.+++.... .+++..+..++.||+.||+|||++. ||+||||||+|||++.++
T Consensus 198 ~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 198 RYFQNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEEEcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCcc
Confidence 988765 5788999988 678998886543 4899999999999999999999732 999999999999998765
Q ss_pred --------------cEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 039322 580 --------------EAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFL 645 (708)
Q Consensus 580 --------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~ 645 (708)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+..
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 49999999886432 2234567899999999999999999999999999999999999999743
Q ss_pred ccccccccc-------cc--------cccccccC------CCCCCC---------CchhHHHHHHHHHHHHhccCCCCCC
Q 039322 646 SLISSSSLN-------TD--------IALDEILD------PRLPPP---------SRSVQEKLISIMEVAFSCLNESPES 695 (708)
Q Consensus 646 ~~~~~~~~~-------~~--------~~~~~~~~------~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~ 695 (708)
......... .. .....+.+ +...+. ..........+.+||.+||++||++
T Consensus 349 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 349 DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred ChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 211000000 00 00000000 000000 0000011235779999999999999
Q ss_pred CCCHHHHHHHhhC
Q 039322 696 RPTMKVVTQQVRI 708 (708)
Q Consensus 696 RPs~~evl~~l~~ 708 (708)
|||++|+++|-++
T Consensus 429 R~ta~e~L~Hp~~ 441 (467)
T PTZ00284 429 RLNARQMTTHPYV 441 (467)
T ss_pred CCCHHHHhcCccc
Confidence 9999999998553
No 261
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1e-35 Score=309.50 Aligned_cols=255 Identities=23% Similarity=0.288 Sum_probs=204.3
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|+..+.||+|++|.||+|... +++.||+|.+..... ......+.+..|+++++.++|+||+++++.+...+..++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEM-IKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEecccc-chHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEE
Confidence 36888899999999999999664 589999999976322 2223556789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+.+++|.+++.... ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 80 MDYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EEecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 99999999999987543 34589999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCc-----------------------------cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 039322 595 ESSN-----------------------------WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFL 645 (708)
Q Consensus 595 ~~~~-----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~ 645 (708)
.... .....|+..|+|||++.+..++.++||||||+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 2110 11235788999999999888999999999999999999999998633
Q ss_pred ccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC----HHHHHHH
Q 039322 646 SLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPT----MKVVTQQ 705 (708)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~~ 705 (708)
.. ......+.......+.. ......+.+++.+||+.||++||| ++|++++
T Consensus 236 ~~--------~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 236 NR--------DETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred ch--------HHHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 21 11122222222221111 113456889999999999999999 8888876
No 262
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4.2e-36 Score=315.98 Aligned_cols=262 Identities=22% Similarity=0.335 Sum_probs=197.0
Q ss_pred HHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--
Q 039322 432 VRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA-- 508 (708)
Q Consensus 432 ~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-- 508 (708)
....++|.+.+.||+|+||.||+|.. .+++.||||.+.... ........+.+|++++++++|+||+++++++...
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF--QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS 88 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh--hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc
Confidence 34557899999999999999999964 568899999987532 1223345677899999999999999999987543
Q ss_pred ----CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEe
Q 039322 509 ----RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVA 584 (708)
Q Consensus 509 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 584 (708)
...++++|++ +++|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 89 IENFNEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred ccccCcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEc
Confidence 3568999988 6799988753 2489999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------ccccc
Q 039322 585 DFGIAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLNTD 656 (708)
Q Consensus 585 Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~~~ 656 (708)
|||++...... .....++..|+|||++.+ ..++.++||||+||++|+|++|+.||......... .....
T Consensus 161 Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07878 161 DFGLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSP 237 (343)
T ss_pred CCccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99999865432 234568999999999876 46888999999999999999999998643211000 00000
Q ss_pred ccc--------ccccCCCCCCCCc-hh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 IAL--------DEILDPRLPPPSR-SV----QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~~~--------~~~~~~~~~~~~~-~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
... ..... .++.... .. ......+.+++.+|++.||++|||++|+++|-+
T Consensus 238 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~ 300 (343)
T cd07878 238 EVLKKISSEHARKYIQ-SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY 300 (343)
T ss_pred HHHHhcchhhHHHHhh-ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 000 00000 0000000 00 011224678999999999999999999998743
No 263
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.4e-35 Score=302.58 Aligned_cols=251 Identities=27% Similarity=0.443 Sum_probs=201.0
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc---CCceeeEEEEEeeCCeeE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR---HRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~l~~~~~~~~~~~ 512 (708)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+++.+|++++++++ |||++++++++..+...+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP---DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC---chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE
Confidence 467788999999999999965 5789999999875322 234567888999999996 999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++++|.+++... .+++..++.++.|++.|++|||+. |++||||+|+||+++.++.++|+|||.+...
T Consensus 79 lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALL 151 (277)
T ss_pred EEEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence 999999999999998643 488999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
...........|+..|+|||.+.++ .++.++||||||+++|+|++|+.||.......... .......+.+..
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~-- 224 (277)
T cd06917 152 NQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-----LIPKSKPPRLED-- 224 (277)
T ss_pred CCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-----ccccCCCCCCCc--
Confidence 6544434445688899999987654 46889999999999999999999987432111000 000000111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+.+++.+||+.||++||++.|++++-+
T Consensus 225 ---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~ 257 (277)
T cd06917 225 ---NGYSKLLREFVAACLDEEPKERLSAEELLKSKW 257 (277)
T ss_pred ---ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChH
Confidence 113346889999999999999999999988644
No 264
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-36 Score=306.10 Aligned_cols=252 Identities=25% Similarity=0.409 Sum_probs=204.8
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~l 513 (708)
...|++.++||+||.+.||++...+.+.||+|++.... .+......|..|+..|.+++ |..|+++++|-..++..|+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~--~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE--ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh--cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 36799999999999999999988888899998876422 33455678999999999995 9999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||=+ .+|..+|+...... .+| .++.++.|+..|+.++|.+ ||||.||||.|+|+- .|.+||+|||.|..+.
T Consensus 438 vmE~Gd-~DL~kiL~k~~~~~-~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 438 VMECGD-IDLNKILKKKKSID-PDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQ 510 (677)
T ss_pred Eeeccc-ccHHHHHHhccCCC-chH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccC
Confidence 999764 49999998765322 234 7889999999999999999 999999999999985 5899999999999887
Q ss_pred CCCCc--cccccccccccCccccccCC-----------CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 039322 594 PESSN--WTEFAGTYGYVAPELAYTMK-----------ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 594 ~~~~~--~~~~~~~~~y~aPE~~~~~~-----------~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
++... ....+||+.||+||.+.... .++++||||+|||+|+|+.|+.||.... .....+.
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-------n~~aKl~ 583 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-------NQIAKLH 583 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-------HHHHHHH
Confidence 66543 35678999999999886432 5578999999999999999999987322 1344566
Q ss_pred cccCCCC--CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 661 EILDPRL--PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 661 ~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
++.++.. ..+...... ++.++++.|+..||++|||..|+++|
T Consensus 584 aI~~P~~~Iefp~~~~~~---~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 584 AITDPNHEIEFPDIPEND---ELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred hhcCCCccccccCCCCch---HHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 6777643 222111111 27889999999999999999999986
No 265
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.2e-36 Score=314.89 Aligned_cols=256 Identities=22% Similarity=0.280 Sum_probs=196.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||++..+ +++.||+|++.+.. .........+..|+.++..++|++|+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-MLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH-HHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence 46889999999999999999764 57889999986411 11122344578899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred EeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 99999999999997532 3478999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCc-cccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC--
Q 039322 595 ESSN-WTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR-- 666 (708)
Q Consensus 595 ~~~~-~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 666 (708)
.... .....|++.|+|||++. ...++.++|||||||++|||++|+.||...... .....+....
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~ 226 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV--------ETYGKIMNHKER 226 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH--------HHHHHHhCCCcc
Confidence 3222 23356899999999886 345788999999999999999999999743211 1111111111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPES--RPTMKVVTQQV 706 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l 706 (708)
...+ .........+.+++.+|+..+|.+ ||+++|+++|-
T Consensus 227 ~~~p-~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~ 267 (332)
T cd05623 227 FQFP-AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP 267 (332)
T ss_pred ccCC-CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence 1111 111122345778888988665544 78999999874
No 266
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.3e-35 Score=300.40 Aligned_cols=254 Identities=28% Similarity=0.393 Sum_probs=201.9
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|...+.||+|++|.||+|.. .+++.||+|.++..... ......+..|++++++++|+||+++++++...+..++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEE
Confidence 477889999999999999965 46889999998764322 345678999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 79 EYCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred ecCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 9999999999997543 378899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcc----ccccccccccCccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 596 SSNW----TEFAGTYGYVAPELAYTMK---ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 596 ~~~~----~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
.... ....++..|+|||++.+.. .+.++||||||+++|++++|+.||......... .........+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~ 228 (264)
T cd06626 153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQI----MFHVGAGHKPPIP 228 (264)
T ss_pred CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHH----HHHHhcCCCCCCC
Confidence 3222 1345788999999988766 788999999999999999999998632110000 0000000111111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
. .......+.+++.+||+.+|++|||++|++.+=
T Consensus 229 ~----~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~ 262 (264)
T cd06626 229 D----SLQLSPEGKDFLDRCLESDPKKRPTASELLQHP 262 (264)
T ss_pred c----ccccCHHHHHHHHHHccCCcccCCCHHHHhcCC
Confidence 1 111234577899999999999999999998763
No 267
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.2e-35 Score=300.95 Aligned_cols=249 Identities=27% Similarity=0.403 Sum_probs=201.1
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+-|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|++.+++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEE
Confidence 3467788999999999999965 468899999976431 223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 81 MEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 153 (277)
T ss_pred EEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceeccc
Confidence 9999999999998643 378999999999999999999998 999999999999999999999999999876544
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........++..|+|||.+.+..++.++||||||+++|+|++|..||...... .....+.....+. ..
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~---~~ 222 (277)
T cd06641 154 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--------KVLFLIPKNNPPT---LE 222 (277)
T ss_pred chhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--------HHHHHHhcCCCCC---CC
Confidence 333333456788999999998888899999999999999999999998632211 1111111111111 11
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
...+..+.+++.+||+.+|.+||++++++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 223 GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1223457889999999999999999999986
No 268
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.3e-35 Score=301.15 Aligned_cols=252 Identities=25% Similarity=0.407 Sum_probs=199.5
Q ss_pred ccccccceeccccCccEEEEEeC-CCc----EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQ----VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.+|++.+.||+|+||.||+|..+ +|+ .||+|...... .......+.+|++++++++|+||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET---SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 67889999999999999999653 233 58999887542 23445678899999999999999999999987 78
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++|+||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.++
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred eEEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccc
Confidence 899999999999999997543 3489999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCccc--cccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 039322 591 FLKPESSNWT--EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 591 ~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
.......... ...++..|+|||.+....++.++|+||||+++||+++ |+.||+.... ......+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~ 229 (279)
T cd05057 158 LLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--------VEIPDLLEKGER 229 (279)
T ss_pred cccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhCCCC
Confidence 7653332221 1223568999999988889999999999999999998 9999874321 111111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.+.. ....+.+++.+||..+|++||++.++++.|+
T Consensus 230 ~~~~~~---~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~ 266 (279)
T cd05057 230 LPQPPI---CTIDVYMVLVKCWMIDAESRPTFKELINEFS 266 (279)
T ss_pred CCCCCC---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111111 1235778899999999999999999998774
No 269
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.7e-35 Score=299.57 Aligned_cols=255 Identities=27% Similarity=0.410 Sum_probs=208.0
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|++|.||+|... +++.||+|.+..... ......+..|++.+.+++|+|++++++++..++..++|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD---EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIV 77 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc---hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEE
Confidence 36888999999999999999665 589999999876422 14567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
+||+++++|.+++... ..+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+....
T Consensus 78 ~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~ 151 (264)
T cd06623 78 LEYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLE 151 (264)
T ss_pred EEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 9999999999999754 348999999999999999999999 8 99999999999999999999999999998765
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........++..|+|||...+..++.++|+||||+++|+|++|+.||..... .........+...........
T Consensus 152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 226 (264)
T cd06623 152 NTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-----PSFFELMQAICDGPPPSLPAE 226 (264)
T ss_pred cCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----cCHHHHHHHHhcCCCCCCCcc
Confidence 444443455678999999999888899999999999999999999999874321 011111122222211111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
..+..+.+++.+||+.+|++||++.|++++=
T Consensus 227 --~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~ 257 (264)
T cd06623 227 --EFSPEFRDFISACLQKDPKKRPSAAELLQHP 257 (264)
T ss_pred --cCCHHHHHHHHHHccCChhhCCCHHHHHhCH
Confidence 0344688999999999999999999999863
No 270
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=9.9e-36 Score=301.79 Aligned_cols=251 Identities=24% Similarity=0.325 Sum_probs=185.2
Q ss_pred eeccccCccEEEEEeCCC---cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 443 CIGNGGHGSVYRAELPSG---QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
.||+|+||.||+|...++ ..+++|.+.... .....+.+.+|+.+++.++||||+++++++......++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA---SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC---ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 589999999999965433 346677765421 22346789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC--
Q 039322 520 RGSLAAILSSDTA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES-- 596 (708)
Q Consensus 520 ~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 596 (708)
+|+|.+++..... ....++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence 9999999975432 23456778889999999999999998 99999999999999999999999999986432211
Q ss_pred CccccccccccccCcccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCC
Q 039322 597 SNWTEFAGTYGYVAPELAYT-------MKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
.......++..|+|||+... ..++.++||||||+++|||++ |..||.....................++...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE 235 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence 11233467889999998743 235678999999999999997 5678753221100000000001111122221
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
. .....+.+++..|| .+|++||+++||++.|
T Consensus 236 ~------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 236 L------PYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred C------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 1 12235777888999 6799999999999876
No 271
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.4e-36 Score=304.11 Aligned_cols=257 Identities=24% Similarity=0.347 Sum_probs=205.4
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|+..+.||+|++|.||+|..+ +++.||+|.+.... .....+++.+|++++++++||||+++++++..++..+++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI---NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISIC 77 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc---ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEE
Confidence 36788899999999999999665 68899999987632 124567789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
+||+++++|.+++.... ..+++..+..++.|++.|++|||+ . +++|+||+|+||+++.++.++|+|||.+....
T Consensus 78 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~ 152 (265)
T cd06605 78 MEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV 152 (265)
T ss_pred EEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence 99999999999997543 458899999999999999999999 7 99999999999999999999999999987553
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.... ....++..|+|||...+..++.++||||+|+++|+|++|+.||....... .......+.......+....
T Consensus 153 ~~~~--~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~- 226 (265)
T cd06605 153 NSLA--KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP---DGIFELLQYIVNEPPPRLPS- 226 (265)
T ss_pred HHHh--hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc---ccHHHHHHHHhcCCCCCCCh-
Confidence 2221 12567889999999988889999999999999999999999986432100 00111122222221111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+.++|.+||..||++|||+.+++++-+
T Consensus 227 -~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 259 (265)
T cd06605 227 -GKFSPDFQDFVNLCLIKDPRERPSYKELLEHPF 259 (265)
T ss_pred -hhcCHHHHHHHHHHcCCCchhCcCHHHHhhCch
Confidence 113446889999999999999999999998744
No 272
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.9e-36 Score=308.74 Aligned_cols=264 Identities=20% Similarity=0.277 Sum_probs=198.2
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|++.+.||+|++|.||+|... +|+.||+|.++.... .......+.+|++++++++|+||+++++++.+.+..++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc--cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEE
Confidence 4778889999999999999654 689999999875321 1122356778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+.+ +|.+++.... ..+++..++.++.||++||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 79 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 79 EYCDQ-DLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred ecCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 99974 8888876433 3489999999999999999999999 9999999999999999999999999999865543
Q ss_pred CCccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------c-cc--ccccccccc
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS--------S-LN--TDIALDEIL 663 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~--------~-~~--~~~~~~~~~ 663 (708)
........++..|+|||++.+.. ++.++||||+|+++|+|+||+.|+......... . .. .........
T Consensus 153 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 153 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 33334456788999999887644 688999999999999999999986321110000 0 00 000000000
Q ss_pred CCC-CCCCC--c----hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 664 DPR-LPPPS--R----SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 664 ~~~-~~~~~--~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
+.. ..... . ........+.+++.+||+.||.+|||++|+++|-++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 000 00000 0 001123467889999999999999999999988653
No 273
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.1e-35 Score=305.22 Aligned_cols=249 Identities=25% Similarity=0.316 Sum_probs=202.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.+.+.||+|++|.||+|... +++.||+|++..... ......+.+.+|++++++++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI-VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence 36888999999999999999654 689999999865211 1123456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++... ..++...+..++.|++.||+|||+. |++||||+|+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 80 MEYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred EecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 9999999999999654 3488999999999999999999998 999999999999999999999999999986643
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
. .....+++.|+|||.+.+...+.++||||||+++|+|++|+.||..... ..............+..
T Consensus 154 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~-- 220 (290)
T cd05580 154 R---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--------IQIYEKILEGKVRFPSF-- 220 (290)
T ss_pred C---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCCccCCcc--
Confidence 3 2334678999999999888889999999999999999999999864321 11112222222221111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 039322 675 QEKLISIMEVAFSCLNESPESRP-----TMKVVTQQV 706 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l 706 (708)
....+.+++.+||..||.+|| +++|++++-
T Consensus 221 --~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~ 255 (290)
T cd05580 221 --FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHP 255 (290)
T ss_pred --CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCc
Confidence 134578899999999999999 888888764
No 274
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.8e-35 Score=299.59 Aligned_cols=255 Identities=22% Similarity=0.328 Sum_probs=199.1
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCc-chhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--Cee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPC-DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~ 511 (708)
++|++.+.||+|+||.||.|.. .+++.||+|.+...... ......+.+.+|++++++++|+||+++++++.++ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 5788999999999999999965 45899999988643222 1223456788999999999999999999998764 467
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
+++|||+++++|.+++.... .+++....+++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999986543 378889999999999999999999 999999999999999999999999999875
Q ss_pred cCCCC---CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc-CCCC
Q 039322 592 LKPES---SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEIL-DPRL 667 (708)
Q Consensus 592 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 667 (708)
..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ....... .+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~~ 227 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM--------AAIFKIATQPTN 227 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH--------HHHHHHhcCCCC
Confidence 53211 1123345788999999998888999999999999999999999998632111 0111111 1111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
+. ........+.+++.+|+. +|++||+++|++++-++
T Consensus 228 ~~---~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 228 PV---LPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264 (265)
T ss_pred CC---CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence 11 112233457788889995 99999999999987553
No 275
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.6e-35 Score=297.90 Aligned_cols=246 Identities=26% Similarity=0.446 Sum_probs=197.1
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
++|++.+.||+|+||.||+|.. +++.||+|.++.+ ...+.+.+|+.++++++|||++++++++..+ ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD------VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc------chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 6789999999999999999975 5788999998652 1245788999999999999999999998764 478999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++.... ...+++..++.++.|++.|++|||+. |++||||||+||+++.++.+||+|||.+......
T Consensus 78 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 78 ELMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred ECCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc
Confidence 9999999999997543 23578999999999999999999998 9999999999999999999999999998754322
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
......+..|+|||.+.++.++.++|+||||+++|||++ |+.||....... ..............
T Consensus 154 ---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~--- 219 (254)
T cd05083 154 ---VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE--------VKECVEKGYRMEPP--- 219 (254)
T ss_pred ---CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--------HHHHHhCCCCCCCC---
Confidence 122334578999999988889999999999999999998 999986432211 01111111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||+.+|++||+++++++.|+
T Consensus 220 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 220 EGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 122345789999999999999999999999875
No 276
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.4e-35 Score=302.06 Aligned_cols=256 Identities=22% Similarity=0.379 Sum_probs=201.8
Q ss_pred ccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
++|+..+.||+|+||.||+|..+ +.+.|++|.+... ......+.+..|++++++++|+||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT---KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc---cchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 67889999999999999999753 3467999987652 12224567899999999999999999999999989
Q ss_pred eeEEEEEeccCCCHHHHhcccccc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 039322 510 HSFLVYELLERGSLAAILSSDTAA------QELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHV 583 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 583 (708)
..++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+++
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEE
Confidence 999999999999999999755422 1589999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCC-CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccccccc
Q 039322 584 ADFGIAKFLKPES-SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDE 661 (708)
Q Consensus 584 ~Dfg~a~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 661 (708)
+|||++....... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||..... ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--------~~~~~~ 230 (275)
T cd05046 159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--------EEVLNR 230 (275)
T ss_pred cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--------HHHHHH
Confidence 9999987543221 12233456778999999988888999999999999999998 7888853211 111111
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......... ....+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 231 ~~~~~~~~~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 LQAGKLELPV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHcCCcCCCC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111111000 0112235889999999999999999999999875
No 277
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.5e-35 Score=300.99 Aligned_cols=258 Identities=26% Similarity=0.438 Sum_probs=201.6
Q ss_pred cccccceeccccCccEEEEEeCC--CcEEEEEEcCCCCCc------chhHhHHHHHHHHHHHHh-ccCCceeeEEEEEee
Q 039322 437 DFDAQYCIGNGGHGSVYRAELPS--GQVVAIKKFHSPLPC------DQIADQKEFLIEVKALTE-IRHRNIVKFYGFCSH 507 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~~--~~~vavK~~~~~~~~------~~~~~~~~~~~e~~~l~~-l~h~~iv~l~~~~~~ 507 (708)
+|++.+.||+|+||.||+|.... ++.+|+|.+...... .......++..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999997654 688999988642211 112334567788888765 699999999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhccc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 508 ARHSFLVYELLERGSLAAILSSD-TAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
++..+++|||+++++|.+++... .....+++..+++++.|++.|+.|||+.. +++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999988542 12345889999999999999999999631 8999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
|.+....... ......++..|+|||+..+..++.++||||||+++|+|++|+.||...... ..........
T Consensus 159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~--------~~~~~~~~~~ 229 (269)
T cd08528 159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--------SLATKIVEAV 229 (269)
T ss_pred cceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--------HHHHHHhhcc
Confidence 9998655433 334556889999999999888999999999999999999999998632211 1111111221
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+... ......+.+++.+||+.||++||++.|+..+++
T Consensus 230 ~~~~~~--~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 YEPLPE--GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCcCCc--ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111111 112345888999999999999999999999875
No 278
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.6e-35 Score=297.18 Aligned_cols=251 Identities=27% Similarity=0.438 Sum_probs=199.8
Q ss_pred ccccceeccccCccEEEEEeCC-----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 438 FDAQYCIGNGGHGSVYRAELPS-----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
+++.+.||+|+||.||++...+ +..||+|++.... .....+.+..|++++++++|+||+++++++.+.+..+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA---DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC---ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeE
Confidence 3567889999999999997653 3789999987532 1225678899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
++|||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++...
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred EEEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceec
Confidence 99999999999999975442 2289999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCccc-cccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCC
Q 039322 593 KPESSNWT-EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 593 ~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
........ ...++..|+|||.+.+..++.++||||+|+++|+|++ |..||+.... ...............
T Consensus 154 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~ 225 (258)
T smart00219 154 YDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--------EEVLEYLKKGYRLPK 225 (258)
T ss_pred ccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCCCCC
Confidence 54322211 2336789999999988889999999999999999998 7888763211 111111111111111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
... .+..+.+++.+|++.||++|||+.|+++.|
T Consensus 226 ~~~---~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 PEN---CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCc---CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111 334588899999999999999999999864
No 279
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.6e-35 Score=300.54 Aligned_cols=257 Identities=23% Similarity=0.372 Sum_probs=201.9
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcc--hhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCD--QIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
+|+..+.||+|++|.||+|.. .+++.||+|++....... .....+.+..|++++++++|+||+++++++.+++..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477888999999999999964 578999999987533221 12245788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEEeeccccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFL 592 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~a~~~ 592 (708)
|+||+++++|.+++.... .+++..+..++.|++.||+|||++ |++|+||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999996533 478999999999999999999999 999999999999998776 5999999999876
Q ss_pred CCCCC----ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 593 KPESS----NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 593 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
..... ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||........ ............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~- 228 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-----LALIFKIASATT- 228 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-----HHHHHHHhccCC-
Confidence 54321 11234578899999999888889999999999999999999999863221100 011111100000
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
...........+.+++.+||..+|++||++.|++++-
T Consensus 229 -~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~ 265 (268)
T cd06630 229 -APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHP 265 (268)
T ss_pred -CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCc
Confidence 1111122345688899999999999999999999863
No 280
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.6e-35 Score=302.94 Aligned_cols=250 Identities=26% Similarity=0.392 Sum_probs=199.5
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
.|...+.||+|++|.||+|.. .+++.+|+|++... .....+.+.+|+.+++.++|+||+++++++..++..++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR----KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc----chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEE
Confidence 455567899999999999964 47889999987642 2234566889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++.. .++++..+..++.|++.|++|||++ +++||||+|+||+++.++.++|+|||.+......
T Consensus 96 e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~ 168 (285)
T cd06648 96 EFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE 168 (285)
T ss_pred eccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccC
Confidence 99999999999865 2378999999999999999999999 9999999999999999999999999988755433
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
........++..|+|||...+..++.++||||+|+++|||++|+.||...... .......... .+......
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~~~~ 239 (285)
T cd06648 169 VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--------QAMKRIRDNL-PPKLKNLH 239 (285)
T ss_pred CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--------HHHHHHHhcC-CCCCcccc
Confidence 33333456889999999998888999999999999999999999998632211 1111111110 00000111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.....+.+++.+||+.+|++|||+.+++++-
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 270 (285)
T cd06648 240 KVSPRLRSFLDRMLVRDPAQRATAAELLNHP 270 (285)
T ss_pred cCCHHHHHHHHHHcccChhhCcCHHHHccCc
Confidence 1234588999999999999999999999763
No 281
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.7e-35 Score=299.11 Aligned_cols=251 Identities=26% Similarity=0.398 Sum_probs=197.9
Q ss_pred ccccccceeccccCccEEEEEeCC----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
.+|.+.+.||+|+||.||+|...+ ...||||...... .....+.+.+|+.++++++||||+++++++.+ +..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT---SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 568889999999999999996533 3468999886532 13456689999999999999999999999875 457
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++|+|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeee
Confidence 89999999999999997543 3479999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCcc-ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCC
Q 039322 592 LKPESSNW-TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RLP 668 (708)
Q Consensus 592 ~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 668 (708)
........ ....++..|+|||.+....++.++||||||+++||+++ |+.||...... .....+... ..+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~~~~~~~~~ 228 (270)
T cd05056 157 LEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--------DVIGRIENGERLP 228 (270)
T ss_pred cccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHcCCcCC
Confidence 54332211 22234568999999888889999999999999999996 99998643211 111111111 111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+ . ..+..+.+++.+||..+|.+|||+.++++.|.
T Consensus 229 ~~-~---~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 229 MP-P---NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263 (270)
T ss_pred CC-C---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 1 12345888999999999999999999998874
No 282
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.3e-35 Score=297.73 Aligned_cols=238 Identities=24% Similarity=0.391 Sum_probs=187.6
Q ss_pred ceeccccCccEEEEEeCCCc-----------EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 442 YCIGNGGHGSVYRAELPSGQ-----------VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
+.||+|+||.||+|...+.. .|++|.+.... .....+.+|+.++++++||||+++++++.. +.
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CC
Confidence 35899999999999765432 47788766421 126778899999999999999999999988 77
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-------cEEE
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-------EAHV 583 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-------~~kl 583 (708)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +++||||||+||+++.++ .+||
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEe
Confidence 8999999999999999976442 588999999999999999999998 999999999999999887 7999
Q ss_pred eecccccccCCCCCccccccccccccCccccccC--CCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccc
Q 039322 584 ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM--KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 584 ~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
+|||++..... .....++..|+|||++.+. .++.++||||||+++|||++ |..||..... .....
T Consensus 150 ~Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--------~~~~~ 217 (259)
T cd05037 150 SDPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--------SEKER 217 (259)
T ss_pred CCCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--------hhHHH
Confidence 99999986543 2234466789999998776 78899999999999999999 5777653221 01111
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+... ...+.+++.+||..+|.+|||+.|+++.|.
T Consensus 218 ~~~~~~~~~~~~-----~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 218 FYQDQHRLPMPD-----CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHhcCCCCCCCC-----chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111111111111 146889999999999999999999999874
No 283
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.9e-35 Score=302.96 Aligned_cols=255 Identities=28% Similarity=0.428 Sum_probs=206.3
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..+.|+..+.||+|++|.||+|... +++.||+|++..... ..+.+..|++.+++++|+|++++++++..++..+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEE
Confidence 4467888899999999999999765 688999999875321 4567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+|+||+++++|.+++.... ..+++..+..++.|++.||+|||+. |++|+||+|+||+++.++.++|+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred EEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 9999999999999997654 3589999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
...........++..|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+.....+. ..
T Consensus 167 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~-~~ 237 (286)
T cd06614 167 TKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--------RALFLITTKGIPP-LK 237 (286)
T ss_pred ccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcCCCC-Cc
Confidence 43333333445778999999998888999999999999999999999998643211 0011111111111 11
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+.+++.+||+.+|.+||++.+++++-.
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred chhhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 11113346889999999999999999999998643
No 284
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.2e-37 Score=314.62 Aligned_cols=250 Identities=23% Similarity=0.356 Sum_probs=196.2
Q ss_pred cccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC--eeEEEE
Q 039322 439 DAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR--HSFLVY 515 (708)
Q Consensus 439 ~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~ 515 (708)
+...+||+|+|-+||+|.+ .+|..||==.++...-.......++|..|+.+|+.|+||||++++.++.+.. ..-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 4556799999999999944 4566665322211111123355688999999999999999999999998765 477999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEeecccccccCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVADFGIAKFLKP 594 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~a~~~~~ 594 (708)
|.+..|+|..|.++++. ...+.+..|++||.+||.|||++ .|+|+|||||-+|||++.+ |.|||+|.|+|.....
T Consensus 123 EL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 99999999999987763 78899999999999999999997 4799999999999999765 8999999999997754
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
. .....+|||.|||||+.. ..|+..+||||||+++.||+|+..||.- -.......+++..+..+....
T Consensus 199 s--~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE-------C~n~AQIYKKV~SGiKP~sl~-- 266 (632)
T KOG0584|consen 199 S--HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE-------CTNPAQIYKKVTSGIKPAALS-- 266 (632)
T ss_pred c--ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh-------hCCHHHHHHHHHcCCCHHHhh--
Confidence 3 334589999999999876 6799999999999999999999999862 112233344444433322111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.-...++.++|.+|+.. .++|||+.|++++
T Consensus 267 kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 267 KVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 11134588999999999 8999999999875
No 285
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.1e-35 Score=302.36 Aligned_cols=262 Identities=23% Similarity=0.354 Sum_probs=202.3
Q ss_pred ccccccceeccccCccEEEEEeC-----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee--C
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH--A 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~--~ 508 (708)
.+|++.+.||+|+||.||+|... +++.||||.+...... ...+.+.+|+++++.++|+||+++++++.. +
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE---QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch---HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 56788899999999999999643 3678999999764221 356789999999999999999999999977 5
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
...++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. |++|+||||+||+++.++.++|+|||.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 155 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGL 155 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccc
Confidence 57899999999999999997544 2489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcc---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc------cccccccc
Q 039322 589 AKFLKPESSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS------SLNTDIAL 659 (708)
Q Consensus 589 a~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~------~~~~~~~~ 659 (708)
+.......... ....++..|+|||...+..++.++||||||+++|||++|+.|+......... ........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05038 156 AKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235 (284)
T ss_pred ccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence 98765332221 1223456799999998888999999999999999999999997642211100 00000111
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+......+. ....+.++.+++.+||+.+|++|||+.||++.|+
T Consensus 236 ~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05038 236 LELLKEGERLPR--PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281 (284)
T ss_pred HHHHHcCCcCCC--CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHh
Confidence 111111111110 1112346889999999999999999999999874
No 286
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.7e-35 Score=304.10 Aligned_cols=265 Identities=21% Similarity=0.254 Sum_probs=198.2
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
++++|.+.+.||+|+||.||+|.. .+|+.||+|.+..... ......+.+|+++++.++|+||+++.+++..++..+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 79 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE---EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLT 79 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc---CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEE
Confidence 357899999999999999999964 4688999999875321 122345678999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+|+||+. +++.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++..
T Consensus 80 lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 80 FVFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAK 153 (291)
T ss_pred EEEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccccccc
Confidence 9999996 67877765433 3467888999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------ccccc------c
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS--------SLNTD------I 657 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~--------~~~~~------~ 657 (708)
...........++..|+|||++.+. .++.++||||+|+++|||++|+.||+........ ..... .
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 4333333444578899999988754 4788999999999999999999999743211000 00000 0
Q ss_pred cc----ccccCCCCCCCCc---hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 AL----DEILDPRLPPPSR---SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~----~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ..+.....+.... ........+.+++.+|++.||++|||++|++.|=+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~ 290 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence 00 0000000000000 00011345778999999999999999999998744
No 287
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=8.2e-36 Score=305.79 Aligned_cols=264 Identities=23% Similarity=0.360 Sum_probs=201.6
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +++.||+|.+...... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD--KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc--chhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEE
Confidence 46888999999999999999764 5899999998753321 13356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||++++++.++.... ..+++.++..++.|++.|++|||+. +++|||++|+||++++++.++|+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 79 FEFVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred EecCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 9999999998877543 2389999999999999999999999 999999999999999999999999999986654
Q ss_pred CCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------cccc--------cc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS--------SLNT--------DI 657 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~--------~~~~--------~~ 657 (708)
.........++..|+|||+..+ ..++.++||||||+++|||++|+.||......... .... ..
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 153 PGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred CccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccch
Confidence 4433344567899999998865 34678999999999999999999998632211000 0000 00
Q ss_pred ccccccCCCCCCCC---chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPS---RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+...... .........+.+++.+||+.+|++||++++++++-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 285 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCC
Confidence 00000000000000 001122456889999999999999999999998743
No 288
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.2e-35 Score=306.42 Aligned_cols=264 Identities=23% Similarity=0.277 Sum_probs=200.2
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcch-hHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQ-IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+|++.+.||+|++|.||+|.. .+++.||||.++....... ......+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477788999999999999965 4689999999976432211 12345677899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+ +|+|.+++.... ..+++..++.++.|+++||+|||++ +++||||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 889999996543 3589999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------------cccccc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------------TDIALD 660 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------------~~~~~~ 660 (708)
.........++..|+|||.+.+ ..++.++||||||+++|||++|..||............ ......
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 4333344456788999998765 45788999999999999999998777532211000000 000000
Q ss_pred cccCCCCCCC---CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 661 EILDPRLPPP---SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 661 ~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.......... ..........+.+++.+||++||++|||++|++++=
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~ 283 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHP 283 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCc
Confidence 0000000000 001112235688999999999999999999999873
No 289
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.6e-35 Score=306.78 Aligned_cols=193 Identities=22% Similarity=0.361 Sum_probs=158.3
Q ss_pred ceeccccCccEEEEEeC---CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee--CCeeEEEEE
Q 039322 442 YCIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH--ARHSFLVYE 516 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e 516 (708)
..||+|+||.||+|... ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++|+|
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 57999999999999754 45789999986521 23457789999999999999999999854 457899999
Q ss_pred eccCCCHHHHhcccc------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee----CCCCcEEEeec
Q 039322 517 LLERGSLAAILSSDT------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL----DLEYEAHVADF 586 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl~Df 586 (708)
|+.+ +|.+++.... ....+++..++.++.|++.||+|||+. +++||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9875 7877775322 123478999999999999999999999 99999999999999 55678999999
Q ss_pred ccccccCCCCC---ccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCc
Q 039322 587 GIAKFLKPESS---NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDF 644 (708)
Q Consensus 587 g~a~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~ 644 (708)
|+++....... ......+++.|+|||++.+. .++.++||||+||++|||+||+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 99986643322 12345678999999988764 578899999999999999999999863
No 290
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.5e-35 Score=296.96 Aligned_cols=252 Identities=23% Similarity=0.349 Sum_probs=201.7
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|+..+.||+|++|.||+|.. .+++.+|+|.+..... .......+..|++++++++|||++++++.+..++..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM--TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc--ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEE
Confidence 478889999999999999955 4688999999875321 2234678899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEeecccccccCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVADFGIAKFLKP 594 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~a~~~~~ 594 (708)
||+++++|.+++.... ...+++..+.+++.|++.|++|||++ +++||||+|+||+++.+ +.+||+|||.+.....
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 79 EYAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred ecCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 9999999999997543 23478999999999999999999999 99999999999999865 4589999999986643
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.. ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||+.... .............+...
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-- 223 (256)
T cd08220 155 KS-KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL--------PALVLKIMSGTFAPISD-- 223 (256)
T ss_pred Cc-cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch--------HHHHHHHHhcCCCCCCC--
Confidence 32 22335678899999999888889999999999999999999999864221 11111111111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.....+.+++.+||+.+|++|||++|++++=
T Consensus 224 -~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p 254 (256)
T cd08220 224 -RYSPDLRQLILSMLNLDPSKRPQLSQIMAQP 254 (256)
T ss_pred -CcCHHHHHHHHHHccCChhhCCCHHHHhhCC
Confidence 1234588999999999999999999999863
No 291
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-35 Score=317.67 Aligned_cols=257 Identities=21% Similarity=0.256 Sum_probs=196.7
Q ss_pred hccccccceeccccCccEEEEEeC---CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
..+|.+.+.||+|+||.||++... .++.||+|.+... ....+|++++++++||||+++++++......
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 357999999999999999999643 3578999987642 2345799999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++|||++. ++|.+++... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.++|+|||++..
T Consensus 162 ~lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~ 234 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACK 234 (392)
T ss_pred EEEehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccc
Confidence 99999996 5888888432 4589999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc---------------ccc
Q 039322 592 LKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS---------------SLN 654 (708)
Q Consensus 592 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~---------------~~~ 654 (708)
....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......... ...
T Consensus 235 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 235 LDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred cCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence 5443222 23456899999999999888999999999999999999999998642211000 000
Q ss_pred cc------cccccc---cCCCCCCCCc-hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 TD------IALDEI---LDPRLPPPSR-SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 ~~------~~~~~~---~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ...... ..+....+.. .......++.+++.+|+..||++|||+.|++.+-+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 00 000000 0000000000 00112345778999999999999999999998743
No 292
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.2e-35 Score=302.14 Aligned_cols=263 Identities=19% Similarity=0.274 Sum_probs=197.5
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|++|.||+|..+ +++.||+|.+...... .....+.+|++++++++|+||+++++++..++..++|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE---GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc---CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 67899999999999999999664 6889999998753211 1234567899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+.+ +|.+++.... ..+++..++.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||+++....
T Consensus 82 ~e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 82 FEYLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred EecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 999985 9999886543 3578999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------cccccccc------
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS--------SLNTDIAL------ 659 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~--------~~~~~~~~------ 659 (708)
.........++..|+|||+..+ ..++.++||||+|+++|+|++|+.||......... ........
T Consensus 156 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 156 PSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred CCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 2222233356789999998865 45788999999999999999999998643210000 00000000
Q ss_pred ccccCCCCCCC--Cc---h--hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 660 DEILDPRLPPP--SR---S--VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 660 ~~~~~~~~~~~--~~---~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........... .. . .......+.+++.+|++.+|++|||+.|++++-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~ 290 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 00000000000 00 0 0001145678999999999999999999998754
No 293
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.8e-35 Score=298.28 Aligned_cols=253 Identities=27% Similarity=0.362 Sum_probs=201.3
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCc-chhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPC-DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+|+..+.||+|++|.||+|... +++.|++|.+...... ...+..+.+.+|++++++++|+||+++++++..++..+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999765 7899999998653211 1123456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+++++|.+++.... .+++..+..++.|++.|++|||+. |++|+||+|+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999996543 478999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC-CCCCCCCc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD-PRLPPPSR 672 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 672 (708)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||...... ........ ...+..
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~-- 223 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV--------AAVFKIGRSKELPPI-- 223 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH--------HHHHHHHhcccCCCc--
Confidence 32 223456788999999987766 889999999999999999999998632210 00000000 111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.+++.+||+.+|++||++++++++-.
T Consensus 224 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 257 (258)
T cd06632 224 -PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPF 257 (258)
T ss_pred -CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCC
Confidence 1112345788999999999999999999998643
No 294
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1e-35 Score=299.97 Aligned_cols=239 Identities=22% Similarity=0.392 Sum_probs=186.9
Q ss_pred eeccccCccEEEEEeCC--------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 443 CIGNGGHGSVYRAELPS--------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.||+|+||.||+|.... ...||+|.+... .....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcch----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 58999999999996532 234888887542 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc--------EEEeec
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE--------AHVADF 586 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--------~kl~Df 586 (708)
|||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++. ++++||
T Consensus 78 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccc
Confidence 99999999999997654 3578999999999999999999999 9999999999999987765 699999
Q ss_pred ccccccCCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCC-CCCCccccccccccccccccccccC
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGK-HPRDFLSLISSSSLNTDIALDEILD 664 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 664 (708)
|.+....+. ....++..|+|||++.+. .++.++||||||+++|||++|. .||....... . .....
T Consensus 153 g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--------~-~~~~~ 219 (258)
T cd05078 153 GISITVLPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--------K-LQFYE 219 (258)
T ss_pred ccccccCCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--------H-HHHHH
Confidence 998754322 234577899999998764 4788999999999999999985 5554221110 0 00111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+.. ...++.+++.+||+.||++|||++++++.|.
T Consensus 220 ~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 DRHQLPAP----KWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccccCCCC----CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11111111 1235789999999999999999999999874
No 295
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-36 Score=317.17 Aligned_cols=191 Identities=23% Similarity=0.357 Sum_probs=163.7
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
...+|++.+.||+|+||.||+|... +++.||+|..... ....|+.++++++|+||+++++++..++..+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITC 133 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----------ccHHHHHHHHhCCCCCCcChhheEEeCCeeE
Confidence 3457999999999999999999654 5778999985432 2345899999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+|+|++. ++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 134 lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred EEEEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 9999995 58888886433 4589999999999999999999999 9999999999999999999999999999753
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p 641 (708)
... .......|+..|+|||++.+..++.++|||||||++|||+++..|
T Consensus 208 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 208 VVA-PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred ccC-cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 322 222345689999999999998999999999999999999985554
No 296
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.1e-35 Score=305.43 Aligned_cols=254 Identities=23% Similarity=0.276 Sum_probs=196.9
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||++... +++.||+|.+..... ......+.+.+|+++++.++||||+++++.+..++..++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL-ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh-hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence 36888999999999999999654 578999999875321 1123356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++....
T Consensus 80 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 80 MEYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999999996543 478999999999999999999999 999999999999999999999999999863211
Q ss_pred CCC---------------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 039322 595 ESS---------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659 (708)
Q Consensus 595 ~~~---------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 659 (708)
... ......++..|+|||.+.+..++.++|+||||+++|||++|+.||..... ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--------~~~~ 225 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELF 225 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHH
Confidence 000 01123467889999999888899999999999999999999999863211 1111
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHH
Q 039322 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPT---MKVVTQQ 705 (708)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 705 (708)
..........+... ...+..+.+++.+||+.||++||+ +.+++++
T Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 226 GQVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHhcccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 11111111111110 122345789999999999999998 4555554
No 297
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.7e-35 Score=303.15 Aligned_cols=252 Identities=25% Similarity=0.417 Sum_probs=196.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCc----EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQ----VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
++|+..+.||+|+||.||+|... +|+ .||+|.+.... ......++.+|+.++++++||||+++++++..+ .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT---GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence 67888899999999999999653 444 57889876532 223345688999999999999999999998764 4
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++++||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccc
Confidence 678999999999999987543 3478999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 039322 591 FLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 591 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
........ .....++..|+|||++.+..++.++||||||+++|||++ |+.||......... .... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~-----~~~~--~~~~~ 230 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP-----DLLE--KGERL 230 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHH--CCCCC
Confidence 65433221 122345678999999988889999999999999999997 99998642211100 0000 01111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+. .....+.+++.+||..+|++||+++++++.++
T Consensus 231 ~~~~----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 231 PQPP----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred CCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 12245788999999999999999999998875
No 298
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.4e-35 Score=299.46 Aligned_cols=249 Identities=25% Similarity=0.407 Sum_probs=194.6
Q ss_pred ceeccccCccEEEEEeCC-------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 442 YCIGNGGHGSVYRAELPS-------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+.||+|+||.||+|...+ ++.+|+|.+.... .......+.+|+++++.++||||+++++++...+..++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA---TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc---chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEE
Confidence 358999999999997542 2579999886532 123456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccc----cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-----cEEEee
Q 039322 515 YELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-----EAHVAD 585 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-----~~kl~D 585 (708)
|||+++++|.+++.... ....+++.++..++.|++.|++|||+. +++|+||+|+||+++.++ .++++|
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECC
Confidence 99999999999996532 123478899999999999999999998 999999999999999877 899999
Q ss_pred cccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccc
Q 039322 586 FGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 586 fg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
||++......... .....++..|+|||.+.++.++.++||||||+++|||++ |+.||....... ....+
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--------~~~~~ 226 (269)
T cd05044 155 FGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--------VLQHV 226 (269)
T ss_pred cccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--------HHHHH
Confidence 9998755332211 122345678999999999899999999999999999998 999986322111 11111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 663 LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........ ....+..+.+++.+||..+|++||+++++++.|+
T Consensus 227 ~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 227 TAGGRLQK---PENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred hcCCccCC---cccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11111111 1122346789999999999999999999999874
No 299
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.7e-35 Score=298.56 Aligned_cols=259 Identities=24% Similarity=0.362 Sum_probs=199.7
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcch------hHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQ------IADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
+|...+.||+|++|.||+|.. .+|+.||+|.++....... ....+.+..|++++++++|+|++++++++..++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999954 4688999998864221111 112356888999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
..++||||+++++|.+++... ..+++..+..++.|++.|+.|||++ +++||||+|+||+++.++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999999765 3488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC--ccccccccccccCccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 039322 590 KFLKPESS--NWTEFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665 (708)
Q Consensus 590 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 665 (708)
........ ......++..|+|||.+.... ++.++||||+|+++|++++|..||.......... .......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~-- 229 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMF----KLGNKRS-- 229 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHH----Hhhcccc--
Confidence 76532211 122345788999999887654 7889999999999999999999986322110000 0000000
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+..........+.+++.+||+.+|++|||+++|++|-+
T Consensus 230 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (272)
T cd06629 230 APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271 (272)
T ss_pred CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence 111111111223456889999999999999999999998854
No 300
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.9e-35 Score=302.93 Aligned_cols=251 Identities=29% Similarity=0.411 Sum_probs=198.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
..|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+.+|+++++.++||||+++.+++.+++..++|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc-CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 56888899999999999999654 688999999864321 2223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+. |++.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 94 MEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 99997 57777775433 3489999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 595 ESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
. ....++..|+|||++. .+.++.++||||||+++|||+||+.||....... ..........+ .
T Consensus 168 ~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~--------~~~~~~~~~~~--~ 233 (307)
T cd06607 168 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--------ALYHIAQNDSP--T 233 (307)
T ss_pred C----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH--------HHHHHhcCCCC--C
Confidence 2 2345778999999874 3567889999999999999999999986432111 00000000000 0
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.........+.+++.+||+.+|++||++.+++++.+
T Consensus 234 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 269 (307)
T cd06607 234 LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRF 269 (307)
T ss_pred CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 111223456889999999999999999999998754
No 301
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2e-35 Score=301.13 Aligned_cols=249 Identities=22% Similarity=0.270 Sum_probs=194.9
Q ss_pred eccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCC
Q 039322 444 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGS 522 (708)
Q Consensus 444 ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~ 522 (708)
||+|+||+||+|.. .+|+.||+|.+..... ........+..|++++++++||||+++++++...+..|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRL-KKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhh-hhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 69999999999954 4688999999865321 112234567789999999999999999999999999999999999999
Q ss_pred HHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 039322 523 LAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602 (708)
Q Consensus 523 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 602 (708)
|.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+..... .......
T Consensus 80 L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~ 154 (277)
T cd05577 80 LKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-GKKIKGR 154 (277)
T ss_pred HHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhcc-CCccccc
Confidence 9999975442 4589999999999999999999999 999999999999999999999999999876543 2222345
Q ss_pred cccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHH
Q 039322 603 AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIM 682 (708)
Q Consensus 603 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 682 (708)
.++..|+|||+..+..++.++||||+|+++|+|++|+.||....... ............... ........+.
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~ 226 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV----EKEELKRRTLEMAVE----YPDKFSPEAK 226 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc----cHHHHHhcccccccc----CCccCCHHHH
Confidence 67889999999988889999999999999999999999986432100 000001111111111 1111234578
Q ss_pred HHHHhccCCCCCCCC-----CHHHHHHHh
Q 039322 683 EVAFSCLNESPESRP-----TMKVVTQQV 706 (708)
Q Consensus 683 ~li~~cl~~dP~~RP-----s~~evl~~l 706 (708)
+++.+||+.||++|| ++.++++|-
T Consensus 227 ~li~~~l~~~p~~R~~~~~~~~~~ll~h~ 255 (277)
T cd05577 227 DLCEALLQKDPEKRLGCRGGSADEVREHP 255 (277)
T ss_pred HHHHHHccCChhHccCCCcccHHHHHhCh
Confidence 999999999999999 777788764
No 302
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.4e-35 Score=297.21 Aligned_cols=254 Identities=23% Similarity=0.336 Sum_probs=203.1
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|.+.+.||+|+||.||+|..+ +|..||+|.+.... ......+.+.+|++++++++|+||+++++++...+..++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTK--MPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhh--ccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEE
Confidence 4778889999999999999654 58899999986521 11234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc-EEEeecccccccCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE-AHVADFGIAKFLKP 594 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfg~a~~~~~ 594 (708)
||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++. +|++|||.+.....
T Consensus 79 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 79 EYCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred ecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 99999999999965432 3478999999999999999999999 9999999999999998864 69999999987654
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........++..|+|||+..+..++.++||||||+++|||++|+.||..... .............+..
T Consensus 155 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~--- 223 (257)
T cd08225 155 SMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL--------HQLVLKICQGYFAPIS--- 223 (257)
T ss_pred CcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHhcccCCCCC---
Confidence 43333445688999999999888899999999999999999999999863221 1111111111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+.+++.+||..+|++|||+.|++++-+
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~ 256 (257)
T cd08225 224 PNFSRDLRSLISQLFKVSPRDRPSITSILKRPF 256 (257)
T ss_pred CCCCHHHHHHHHHHhccChhhCcCHHHHhhCCC
Confidence 112235889999999999999999999998754
No 303
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=7.1e-35 Score=292.82 Aligned_cols=250 Identities=30% Similarity=0.454 Sum_probs=203.6
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|+..+.||+|++|.||++... +++.+++|++..... ...+.+.+|++++++++|++++++++++..++..++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 4778889999999999999764 688999999876321 35678999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++.... ..+++..+..++.|++.|+++||+. +++||||+|+||+++.++.++|+|||.+......
T Consensus 77 e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 77 EFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred ecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence 9999999999987643 4589999999999999999999998 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||.......... .......+.... ..
T Consensus 152 ~~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~----~~ 221 (253)
T cd05122 152 KA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF-----KIATNGPPGLRN----PE 221 (253)
T ss_pred cc-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH-----HHHhcCCCCcCc----cc
Confidence 32 344568899999999988888999999999999999999999987432110000 000000011111 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.....+.+++.+||+.||++|||+.|++++
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 222 KWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 113458899999999999999999999986
No 304
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.4e-35 Score=301.99 Aligned_cols=264 Identities=22% Similarity=0.310 Sum_probs=198.6
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|+..+.||+|++|.||+|.. .+|+.||||.++..... ....+.+..|++++++++||||+++++++.+++..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc--cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEe
Confidence 478889999999999999965 46889999998753321 123457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+. ++|.+++.... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 79 EFLH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred eccc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 9996 58998886543 24589999999999999999999999 9999999999999999999999999998765443
Q ss_pred CCccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------ccccc---cccccc-
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------LNTDI---ALDEIL- 663 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~~~~~---~~~~~~- 663 (708)
........++..|+|||...+.. ++.++||||||+++|||+||+.||.......... ..... ......
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 154 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHH
Confidence 33333445678999999877654 5789999999999999999999986432110000 00000 000000
Q ss_pred ----CCCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 664 ----DPRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 664 ----~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+...... .........+.+++.+||+.||++|||++|++++-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 283 (284)
T cd07860 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283 (284)
T ss_pred HHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCC
Confidence 00000000 000111235778999999999999999999998744
No 305
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4e-35 Score=300.16 Aligned_cols=256 Identities=21% Similarity=0.370 Sum_probs=194.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHH-HHhccCCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKA-LTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
++|++.+.||+|+||.||+|... +|+.||+|.++..... ....++..|+.. ++..+||||+++++++..++..++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~l 77 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS---QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWI 77 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc---HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEE
Confidence 46888999999999999999654 6999999998764321 233455566665 666789999999999999999999
Q ss_pred EEEeccCCCHHHHhccc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 514 VYELLERGSLAAILSSD-TAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+|||++ |+|.+++... .....+++..++.++.|++.||+|||++. +++||||||+||+++.++.+||+|||.+...
T Consensus 78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 78 CMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred Ehhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 999997 5888887542 22346899999999999999999999853 8999999999999999999999999999865
Q ss_pred CCCCCccccccccccccCcccccc----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYT----MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
.... ......++..|+|||.+.+ ..++.++|+||+|+++|+|++|+.||..... .............+
T Consensus 155 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~ 226 (283)
T cd06617 155 VDSV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT-------PFQQLKQVVEEPSP 226 (283)
T ss_pred cccc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc-------CHHHHHHHHhcCCC
Confidence 4221 2233467889999998765 3467899999999999999999999863211 00111111111111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+ ....+..+.+++.+||+.+|++||++.+++++-+
T Consensus 227 ~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 263 (283)
T cd06617 227 QLP--AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPF 263 (283)
T ss_pred CCC--ccccCHHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence 000 0112346889999999999999999999998643
No 306
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=298.05 Aligned_cols=257 Identities=23% Similarity=0.276 Sum_probs=203.0
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..+.|+..++||+|+||.||.... .+|+.||.|.+.+.. ............|-.++++++.+.||.+-.+|+.++.+|
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKR-iKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKR-IKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHH-HHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 346789999999999999999854 469999999886521 112223445778999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+|+..|.||+|.-+|...+. ..++++.+..+|.+|+.||++||+. +||+||+||+|||+|+.|+++|+|.|+|..+
T Consensus 262 lVLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEec
Confidence 99999999999999977664 4589999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC-CCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL-PPPS 671 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 671 (708)
.... .....+||.+|||||++.++.|+...|.||+||++|||+.|+.||..... .. -.+-++.+. ..+.
T Consensus 338 ~~g~-~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke--------Kv-k~eEvdrr~~~~~~ 407 (591)
T KOG0986|consen 338 PEGK-PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE--------KV-KREEVDRRTLEDPE 407 (591)
T ss_pred CCCC-ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh--------hh-hHHHHHHHHhcchh
Confidence 6443 33455999999999999999999999999999999999999999863211 00 011111111 1111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQ 705 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 705 (708)
........+..++.+..+++||++|. .+++|.+|
T Consensus 408 ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 408 EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 12222334466667788999999997 44455443
No 307
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.1e-35 Score=299.91 Aligned_cols=263 Identities=23% Similarity=0.317 Sum_probs=201.2
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|++.+.||+|++|.||+|.. .+|+.||+|++...... ....+.+.+|+.++++++||||+++++++..++..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE--GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc--chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEe
Confidence 478889999999999999965 46899999998763211 233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+ +++|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 79 e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 79 EYM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred ccc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 999 999999986543 4589999999999999999999999 9999999999999999999999999999866543
Q ss_pred CC-ccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------ccc---ccc---ccc
Q 039322 596 SS-NWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLN---TDI---ALD 660 (708)
Q Consensus 596 ~~-~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~---~~~---~~~ 660 (708)
.. ......++..|+|||++.+.. ++.++||||+|+++|||++|..||......... ... ... ...
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 153 EPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred CCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcc
Confidence 22 233456889999999886544 688999999999999999998887532210000 000 000 000
Q ss_pred cccCCCCCCCC-----chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPS-----RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.....+... ....+....+.+++.+|++.+|++|||++++++|-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~ 284 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcC
Confidence 00000000000 000122357889999999999999999999998754
No 308
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.2e-35 Score=300.17 Aligned_cols=263 Identities=19% Similarity=0.300 Sum_probs=200.5
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|+..+.||+|++|.||+|... +|+.||||.++.... ....+.+.+|++++++++|+||+++++++...+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE---EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc---ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEE
Confidence 4788899999999999999764 688999999876422 123456778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++ +|.+++........+++..+..++.|++.||+|||+. +++||||+|+||++++++.++++|||++......
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence 99985 8999887655445689999999999999999999999 9999999999999999999999999999765433
Q ss_pred CCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-------cccccccc-----c
Q 039322 596 SSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-------NTDIALDE-----I 662 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-------~~~~~~~~-----~ 662 (708)
........++..|+|||++.+. .++.++||||+|+++|+|++|+.||........... ........ .
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 3333344578899999987654 468899999999999999999999874321100000 00000000 0
Q ss_pred cCCCCCCCCc-----hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 663 LDPRLPPPSR-----SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 663 ~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.....+.... ..+.....+.+++.+|++.||.+||+++|++++=
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~ 282 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHP 282 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCC
Confidence 0011111000 0011234678999999999999999999999763
No 309
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=4e-35 Score=301.70 Aligned_cols=263 Identities=22% Similarity=0.256 Sum_probs=199.0
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--CeeE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHSF 512 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~~ 512 (708)
++|++.+.||+|+||.||+|..+ +++.+|+|.++..... ......+.+|+.++++++||||+++++++..+ +..+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 57899999999999999999765 6889999998753221 12234577899999999999999999999877 8899
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+.+ +|.+++.... ..+++..++.++.|++.||+|||++ +++||||+|+||+++.++.++|+|||.+...
T Consensus 83 lv~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~ 156 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREY 156 (293)
T ss_pred EEehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence 99999975 9999886543 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------cc------cc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------TD------IA 658 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------~~------~~ 658 (708)
...........++..|+|||.+.+.. ++.++|+||+|+++|+|++|+.||............ .. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 157 GSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred cCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence 54433334456788999999887644 688999999999999999999998643211000000 00 00
Q ss_pred ccccc-----CCCCCCCCchhHH--HHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 659 LDEIL-----DPRLPPPSRSVQE--KLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 659 ~~~~~-----~~~~~~~~~~~~~--~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
+.... ............. ....+.+++.+||+.||++|||+.|++++=
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~ 291 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHP 291 (293)
T ss_pred cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCC
Confidence 00000 0000000000001 234578899999999999999999999864
No 310
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.1e-34 Score=295.16 Aligned_cols=254 Identities=23% Similarity=0.373 Sum_probs=195.6
Q ss_pred ccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC----
Q 039322 438 FDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR---- 509 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~---- 509 (708)
|.+.+.||+|+||.||+|... +++.||||++.... ......+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI--FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc--CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence 567788999999999999643 46889999987533 22334667889999999999999999999886542
Q ss_pred --eeEEEEEeccCCCHHHHhcccc---cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEe
Q 039322 510 --HSFLVYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVA 584 (708)
Q Consensus 510 --~~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 584 (708)
..++++||+.+|+|.+++.... ....+++..+.+++.|++.|++|||+. +++||||||+||+++.++.+|++
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEEC
Confidence 2478999999999998875322 123478899999999999999999998 99999999999999999999999
Q ss_pred ecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccccccc
Q 039322 585 DFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDE 661 (708)
Q Consensus 585 Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 661 (708)
|||+++........ .....++..|++||......++.++||||||+++|||++ |+.||..... ......
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--------~~~~~~ 227 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--------SEIYNY 227 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--------HHHHHH
Confidence 99999865432211 122345678999999988888999999999999999999 8888763221 111111
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+......... ......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 228 ~~~~~~~~~~---~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~ 270 (273)
T cd05074 228 LIKGNRLKQP---PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLE 270 (273)
T ss_pred HHcCCcCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111100 112346889999999999999999999999874
No 311
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.4e-35 Score=302.65 Aligned_cols=263 Identities=27% Similarity=0.373 Sum_probs=201.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|++|.||+|..+ +++.||+|.++.... .....+.+.+|++++++++|+||+++++++..++..++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 78 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED--DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLV 78 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc--cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEE
Confidence 36888999999999999999765 588999999875321 223457789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||++++.+..+.... ..+++.+++.++.|++.|++|||+. +++|+|++|+||++++++.+||+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 79 FEYVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRA 152 (288)
T ss_pred EecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence 9999987777665432 3478999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-ccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------cccc----ccccc
Q 039322 595 ESS-NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS--------SLNT----DIALD 660 (708)
Q Consensus 595 ~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~--------~~~~----~~~~~ 660 (708)
... ......++..|+|||++.+. .++.++||||||+++|+|++|+.||......... .... .....
T Consensus 153 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 153 RPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred CccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccC
Confidence 432 23345678899999999887 7889999999999999999999998643211000 0000 00000
Q ss_pred cccCC-CCCCCC--ch-----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 661 EILDP-RLPPPS--RS-----VQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 661 ~~~~~-~~~~~~--~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
..... ..+... .. .......+.+++++||+.+|++|||+++++++=
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 286 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286 (288)
T ss_pred ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCC
Confidence 00000 000000 00 001145688999999999999999999998763
No 312
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.6e-35 Score=301.57 Aligned_cols=263 Identities=23% Similarity=0.289 Sum_probs=198.7
Q ss_pred ccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|++.+.||.|++|.||+|.. .+|+.||+|++..... .......+.+|++++++++|+|++++++++.+++..+++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE--DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc--cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEe
Confidence 56778899999999999965 4799999999875321 11234567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|++ ++|.+++..... ..+++..+..++.|+++||+|||++ +++||||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 79 FLD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred ccC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 995 699999865442 3589999999999999999999998 99999999999999999999999999997654333
Q ss_pred CccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-------ccc------ccc---
Q 039322 597 SNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-------NTD------IAL--- 659 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-------~~~------~~~--- 659 (708)
.......++..|+|||++.+. .++.++||||||+++|+|++|+.||........... ... ...
T Consensus 154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhh
Confidence 333334568899999987664 468899999999999999999999864321100000 000 000
Q ss_pred -ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 660 -DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 660 -~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....................+.+++.+||+.||++|||++|++++-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~ 282 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCC
Confidence 000000000000111112346889999999999999999999998754
No 313
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.6e-35 Score=300.33 Aligned_cols=245 Identities=26% Similarity=0.397 Sum_probs=196.3
Q ss_pred cceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 441 QYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
...||+|+||.||+|.. .+++.||+|++... .......+.+|+.+++.++|+|++++++++..++..++||||++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 100 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 100 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc----chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCC
Confidence 35799999999999966 47889999987542 22345678899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+++|.+++... .+++..+..++.|++.|++|||+. |++||||+|+||+++.++.++|+|||++..........
T Consensus 101 ~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~ 173 (292)
T cd06657 101 GGALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 173 (292)
T ss_pred CCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccccc
Confidence 99999987542 378999999999999999999999 99999999999999999999999999987654333333
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....++..|+|||.+.+..++.++|+||+|+++|+|++|..||......... ........+.... ......
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~ 244 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-----KMIRDNLPPKLKN----LHKVSP 244 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHHHhhCCcccCC----cccCCH
Confidence 4456789999999988888899999999999999999999998642211100 0011111111111 111233
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 680 SIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.+.+++.+||+.+|.+||++.+++++
T Consensus 245 ~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 245 SLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 57788999999999999999999986
No 314
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1e-35 Score=325.53 Aligned_cols=255 Identities=27% Similarity=0.427 Sum_probs=200.3
Q ss_pred HHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC---
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--- 508 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--- 508 (708)
+-..+|+....||+||||.||+++.+ ||+.||||++.... .......+.+|++.+.+++|||||+++..+.+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 34578889999999999999999765 89999999998632 334567789999999999999999997443100
Q ss_pred --------------------------------------------------------------------------------
Q 039322 509 -------------------------------------------------------------------------------- 508 (708)
Q Consensus 509 -------------------------------------------------------------------------------- 508 (708)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred ------------------------------------CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHH
Q 039322 509 ------------------------------------RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADAL 552 (708)
Q Consensus 509 ------------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l 552 (708)
-.+||-||||+..++.++++.+.... .....|+++++|++||
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGL 710 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHH
Confidence 01478899999988888876554211 4678899999999999
Q ss_pred HHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC------------------CCCCccccccccccccCcccc
Q 039322 553 SYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK------------------PESSNWTEFAGTYGYVAPELA 614 (708)
Q Consensus 553 ~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~------------------~~~~~~~~~~~~~~y~aPE~~ 614 (708)
+|+|++ |+|||||||.|||+++++.|||+|||+|+... .+....+..+||.-|+|||++
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999998721 111134567899999999998
Q ss_pred ccCC---CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCC
Q 039322 615 YTMK---ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNE 691 (708)
Q Consensus 615 ~~~~---~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 691 (708)
.+.. |+.|+|+||+||+++||+. ||.- ...+...+..+.++.++.++....+....=..+|++++++
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T-------sMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~h 857 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGT-------SMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSH 857 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCc-------hHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcC
Confidence 7654 9999999999999999984 4541 2223444555666777666444444444556889999999
Q ss_pred CCCCCCCHHHHHHH
Q 039322 692 SPESRPTMKVVTQQ 705 (708)
Q Consensus 692 dP~~RPs~~evl~~ 705 (708)
||.+||||.|+++.
T Consensus 858 dP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 858 DPSKRPTATELLNS 871 (1351)
T ss_pred CCccCCCHHHHhhc
Confidence 99999999999864
No 315
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=5.8e-35 Score=297.76 Aligned_cols=247 Identities=19% Similarity=0.210 Sum_probs=187.2
Q ss_pred eeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHH---hccCCceeeEEEEEeeCCeeEEEEEec
Q 039322 443 CIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALT---EIRHRNIVKFYGFCSHARHSFLVYELL 518 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~---~l~h~~iv~l~~~~~~~~~~~lv~e~~ 518 (708)
.||+|+||.||++.. .+++.||+|.+.+..... ......+.+|..+++ ..+|++|+.+++++..++..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEcccccc-chHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence 489999999999965 468899999987532211 112233444444333 347999999999999999999999999
Q ss_pred cCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 039322 519 ERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598 (708)
Q Consensus 519 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 598 (708)
++|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 80 ~~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 80 NGGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 9999999986543 489999999999999999999999 99999999999999999999999999987553322
Q ss_pred cccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHH
Q 039322 599 WTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677 (708)
Q Consensus 599 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (708)
.....++..|+|||...+ ..++.++||||+||++|+|++|+.||....... ......... . .........
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~-~--~~~~~~~~~ 222 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD------KHEIDRMTL-T--VNVELPDSF 222 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC------HHHHHHHhh-c--CCcCCcccc
Confidence 223468999999998864 457899999999999999999999986322110 000111000 0 000111123
Q ss_pred HHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 678 LISIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 678 ~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
..++.+++.+||+.||++|| |++|+++|-.
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~ 257 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVF 257 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCcc
Confidence 34688999999999999999 6999998754
No 316
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.7e-35 Score=298.46 Aligned_cols=253 Identities=26% Similarity=0.337 Sum_probs=203.6
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|++.+.||+|+||.||+|... +++.||+|.+..... ......+.+.+|++++++++||||+++++++..++..++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC-VEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhh-cchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 4788899999999999999664 689999999875321 12234578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+.+++|.+++... ..+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 80 DLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred eCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 999999999999754 3488999999999999999999999 9999999999999999999999999999865433
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
. ......++..|+|||.+.+..++.++|+||+|+++|+|++|+.||....... ...............+ .
T Consensus 154 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~----~ 223 (258)
T cd05578 154 T-LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI-----RDQIRAKQETADVLYP----A 223 (258)
T ss_pred c-cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH-----HHHHHHHhccccccCc----c
Confidence 2 2234567889999999988889999999999999999999999987433210 0111111111111111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH--HHHHHHh
Q 039322 676 EKLISIMEVAFSCLNESPESRPTM--KVVTQQV 706 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~--~evl~~l 706 (708)
..+..+.+++.+||+.||.+||++ +|++++=
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~ 256 (258)
T cd05578 224 TWSTEAIDAINKLLERDPQKRLGDNLKDLKNHP 256 (258)
T ss_pred cCcHHHHHHHHHHccCChhHcCCccHHHHhcCC
Confidence 123568899999999999999999 8888763
No 317
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-36 Score=282.97 Aligned_cols=253 Identities=24% Similarity=0.291 Sum_probs=207.1
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..++|+..+++|+|.||.|-.++- .+|+.||+|++++....+ ..+.+.-..|-++++..+||.+..+-..|...++.|
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviia-kdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIA-KDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheee-hHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence 468999999999999999999954 479999999999854332 344556678999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
.||||+.||.|.-+++..+ .+++...+.+-..|+.||.|||++ +||+||+|.+|.++|.||++||+|||++..-
T Consensus 245 FVMeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred EEEEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc
Confidence 9999999999998886543 488888999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
-..+......+||+.|.|||++....|+.++|.|.+|+++|||++|+.||.... .+..+.-++-..+..+..
T Consensus 319 I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d--------h~kLFeLIl~ed~kFPr~ 390 (516)
T KOG0690|consen 319 IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD--------HEKLFELILMEDLKFPRT 390 (516)
T ss_pred ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc--------hhHHHHHHHhhhccCCcc
Confidence 555566678899999999999999999999999999999999999999997322 122222222233333222
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQ 705 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 705 (708)
..+ +...|+...+.+||++|. .+.||.+|
T Consensus 391 ls~----eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 391 LSP----EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred CCH----HHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 222 245667788999999997 56666554
No 318
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6.6e-35 Score=300.46 Aligned_cols=266 Identities=21% Similarity=0.264 Sum_probs=197.7
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCe---
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARH--- 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~--- 510 (708)
++|+..+.||+|+||.||+|.. .+++.||+|.++..... ......+.+|+.++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 78 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE--EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK 78 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc--cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC
Confidence 3688899999999999999965 46899999998753211 123456888999999995 6999999999977665
Q ss_pred --eEEEEEeccCCCHHHHhccccc--ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEee
Q 039322 511 --SFLVYELLERGSLAAILSSDTA--AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL-EYEAHVAD 585 (708)
Q Consensus 511 --~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~D 585 (708)
.|+||||+++ ++.+++..... ...+++..++.++.||+.||+|||++ +++||||+|+||+++. ++.+||+|
T Consensus 79 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 79 PSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred ceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEee
Confidence 8999999986 89888865432 24579999999999999999999999 9999999999999998 88999999
Q ss_pred cccccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------ccccc
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------LNTDI 657 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~~~~~ 657 (708)
||++..+...........+++.|+|||.+.+ ..++.++||||||+++|+|++|..||.......... .....
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
T cd07837 155 LGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQ 234 (295)
T ss_pred cccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 9999865443333334456889999998765 457889999999999999999999986432111000 00000
Q ss_pred cc------cccc-CCCCCCC--CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 AL------DEIL-DPRLPPP--SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~------~~~~-~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .... .+...+. ..........+.++|.+||++||++||+++|+++|=+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~ 293 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCC
Confidence 00 0000 0000000 0001123456889999999999999999999998743
No 319
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.2e-34 Score=290.57 Aligned_cols=254 Identities=27% Similarity=0.378 Sum_probs=206.6
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--CeeEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHSFL 513 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~~l 513 (708)
+|...+.||+|++|.||+|... +++.|++|++...... ....+.+.+|++++++++|+||+++++.+... +..++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS--EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEE
Confidence 4677889999999999999765 6899999998764321 34567889999999999999999999999988 88999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
|+||+++++|.+++.... .+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+....
T Consensus 79 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred EEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 999999999999997543 589999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC-CCCCCC
Q 039322 594 PESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD-PRLPPP 670 (708)
Q Consensus 594 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 670 (708)
.... ......++..|+|||...+...+.++||||||+++|+|++|..||..... .......... ......
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~ 225 (260)
T cd06606 153 DIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-------PMAALYKIGSSGEPPEI 225 (260)
T ss_pred cccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------hHHHHHhccccCCCcCC
Confidence 5433 13445688999999999888899999999999999999999999874330 0011111111 111111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
+ ......+.+++.+|++.+|++||++.|++++-++
T Consensus 226 ~---~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 226 P---EHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred C---cccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 1 1124568899999999999999999999987553
No 320
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1e-34 Score=293.49 Aligned_cols=246 Identities=26% Similarity=0.340 Sum_probs=198.0
Q ss_pred eccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCC
Q 039322 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGS 522 (708)
Q Consensus 444 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~ 522 (708)
||.|++|.||+|... +++.||+|++.+... ......+.+.+|++++++++||||+++++++.+++..++++||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHI-VETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcc-hhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 699999999999764 488999999875322 122345679999999999999999999999999999999999999999
Q ss_pred HHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 039322 523 LAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602 (708)
Q Consensus 523 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 602 (708)
|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+....... .....
T Consensus 80 L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~ 152 (262)
T cd05572 80 LWTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTF 152 (262)
T ss_pred HHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccc
Confidence 999996543 378999999999999999999998 99999999999999999999999999998665432 22334
Q ss_pred cccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC--CCCCCCCchhHHHHHH
Q 039322 603 AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD--PRLPPPSRSVQEKLIS 680 (708)
Q Consensus 603 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 680 (708)
.++..|+|||.+.+..++.++|+||+|+++|+|++|+.||..... ........+.. .....+ ... ...
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~---~~~ 222 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE------DPMEIYNDILKGNGKLEFP-NYI---DKA 222 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC------CHHHHHHHHhccCCCCCCC-ccc---CHH
Confidence 678899999998888899999999999999999999999874321 01111222221 111111 111 346
Q ss_pred HHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 039322 681 IMEVAFSCLNESPESRPT-----MKVVTQQVR 707 (708)
Q Consensus 681 l~~li~~cl~~dP~~RPs-----~~evl~~l~ 707 (708)
+.+++.+||+.+|++||+ ++|++++-+
T Consensus 223 ~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~ 254 (262)
T cd05572 223 AKDLIKQLLRRNPEERLGNLKGGIKDIKKHKW 254 (262)
T ss_pred HHHHHHHHccCChhhCcCCcccCHHHHhcChh
Confidence 889999999999999999 899988643
No 321
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2e-34 Score=290.63 Aligned_cols=255 Identities=26% Similarity=0.381 Sum_probs=207.3
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|.+.+.||.|++|.||++... +++.||+|.+.... ......+.+.+|++++++++|+|++++.+.+..++..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN--MSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeeccc--CChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEE
Confidence 4778899999999999999654 68899999987532 12345667889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 516 ELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||+++++|.+++.... ....+++..+..++.+++.|++|||+. |++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 9999999999997643 135589999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........+++.|+|||...+..++.++||||+|+++|+|++|+.||+.... .............+.+.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~-- 225 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL--------LELALKILKGQYPPIPS-- 225 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH--------HHHHHHHhcCCCCCCCC--
Confidence 44333445688899999998888899999999999999999999999874321 11111111221221111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+.+++.+||+.+|++|||+.|++++-.
T Consensus 226 -~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 257 (258)
T cd08215 226 -QYSSELRNLVSSLLQKDPEERPSIAQILQSPF 257 (258)
T ss_pred -CCCHHHHHHHHHHcCCChhhCcCHHHHhcCCC
Confidence 12345788999999999999999999998744
No 322
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=8.5e-35 Score=298.50 Aligned_cols=257 Identities=25% Similarity=0.358 Sum_probs=195.3
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~l 513 (708)
++|...+.||+|+||.||++.. .+++.||+|.+..... ......+.+|+.++.++. |+||+++++++..++..++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD---EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC---hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 4566778899999999999965 4689999999875321 244667889999999996 9999999999999999999
Q ss_pred EEEeccCCCHHHHhccc--ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 514 VYELLERGSLAAILSSD--TAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
+|||+.. ++.++.... .....+++..+..++.|++.||+|||+.. +++||||||+||+++.++.+||+|||++..
T Consensus 81 ~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 157 (288)
T cd06616 81 CMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQ 157 (288)
T ss_pred EEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHH
Confidence 9999865 655543211 11245899999999999999999999742 899999999999999999999999999976
Q ss_pred cCCCCCccccccccccccCccccccC---CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTM---KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
...... .....++..|+|||++.+. .++.++||||+|+++|||++|+.||..... .............+
T Consensus 158 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~ 229 (288)
T cd06616 158 LVDSIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-------VFDQLTQVVKGDPP 229 (288)
T ss_pred hccCCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-------HHHHHhhhcCCCCC
Confidence 543222 2334678899999998766 688899999999999999999999863221 00111111111110
Q ss_pred C-CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 669 P-PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 669 ~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
. ........+..+.+++.+||+++|++|||+++|+++-
T Consensus 230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~ 268 (288)
T cd06616 230 ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHP 268 (288)
T ss_pred cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0 1111122345688999999999999999999999864
No 323
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=277.15 Aligned_cols=258 Identities=22% Similarity=0.253 Sum_probs=214.3
Q ss_pred HHhccccccc-eeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEee--
Q 039322 433 RATNDFDAQY-CIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSH-- 507 (708)
Q Consensus 433 ~~~~~~~~~~-~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~-- 507 (708)
..+++|.+.. +||-|-.|.|-...+ .+|+.+|+|++.. .....+|++..-.. .|||||.+++++..
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D---------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~ 128 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD---------SPKARREVELHWMASGHPHIVSIIDVYENSY 128 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc---------CHHHHhHhhhhhhhcCCCceEEeehhhhhhc
Confidence 3466776654 689999999998855 4789999999864 34567788875555 69999999998853
Q ss_pred --CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC---CcEE
Q 039322 508 --ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE---YEAH 582 (708)
Q Consensus 508 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~k 582 (708)
.+.+.+|||.|+||.|.+.++.++. +.+++.++..|..||+.|+.|||+. +|+||||||+|+|.+.. ..+|
T Consensus 129 ~~rkcLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lK 204 (400)
T KOG0604|consen 129 QGRKCLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLK 204 (400)
T ss_pred cCceeeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceE
Confidence 4578899999999999999987653 6699999999999999999999999 99999999999999653 5689
Q ss_pred EeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 039322 583 VADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 583 l~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
|+|||+|..-.. .......+-|+.|.|||++...+|+...|+||+|+++|-|++|.+||..... ..........+
T Consensus 205 LtDfGFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg----~aispgMk~rI 279 (400)
T KOG0604|consen 205 LTDFGFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG----LAISPGMKRRI 279 (400)
T ss_pred ecccccccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC----ccCChhHHhHh
Confidence 999999986543 3345667889999999999999999999999999999999999999974332 22223334556
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 663 LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
..+.+..+...|.+.+....++|+.++..+|.+|.|+.|+++|-||
T Consensus 280 ~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi 325 (400)
T KOG0604|consen 280 RTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWI 325 (400)
T ss_pred hccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchh
Confidence 6677777777888888999999999999999999999999998775
No 324
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3e-34 Score=298.30 Aligned_cols=251 Identities=28% Similarity=0.392 Sum_probs=197.6
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+.|...+.||+|+||.||+|.. .+++.||+|.+..... ........+..|++++++++|+|++++++++.+++..++|
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK-QSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-CchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence 3477788999999999999965 4688999999875322 1223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+.+ ++.+.+.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 104 ~e~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 104 MEYCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP 177 (317)
T ss_pred EeCCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence 999975 8888775433 4489999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 595 ESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
. ....++..|+|||++. .+.++.++||||||+++|||++|+.||..... ......+........
T Consensus 178 ~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--------~~~~~~~~~~~~~~~- 244 (317)
T cd06635 178 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQNESPTL- 244 (317)
T ss_pred c----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHhccCCCC-
Confidence 2 2345788999999874 45688899999999999999999999863211 111111111111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+.+++.+||+.+|++||++.+++++..
T Consensus 245 -~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 245 -QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred -CCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 11123345789999999999999999999998764
No 325
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=8.5e-35 Score=301.54 Aligned_cols=265 Identities=27% Similarity=0.298 Sum_probs=198.2
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--Cee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~ 511 (708)
.++|++.+.||+|+||.||+|.. .+|+.||+|.++...... .....+.+|++++++++|+||+++++++... +..
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD--GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC--CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 46899999999999999999965 468999999986432111 1233466799999999999999999998765 568
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+.+ +|.+++.... ..+++.+++.++.|++.|++|||+. |++||||+|+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred EEEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeee
Confidence 999999975 8888886543 4589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------cccc---c-
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------TDIA---L- 659 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------~~~~---~- 659 (708)
............++..|+|||.+.+ ..++.++||||+|+++|||++|+.||............ .... .
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 158 YGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred cCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 6544333334456788999998865 45788999999999999999999998643221100000 0000 0
Q ss_pred -----ccccCCCCCCC--CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 660 -----DEILDPRLPPP--SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 660 -----~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+..+.. ..........+.+++.+|++.||++|||++|+++|-+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~ 292 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSY 292 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 00000000000 0000112345778999999999999999999998754
No 326
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.1e-34 Score=292.20 Aligned_cols=252 Identities=23% Similarity=0.305 Sum_probs=205.0
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|++.+.||+|++|.||++.. .+++.+|+|.+..... .......+.+|++++++++|+||+++.+++......++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM--SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc--cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEe
Confidence 477889999999999999954 4688999999875321 2234567888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 516 ELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||+++++|.+++.... ....+++..++.++.|++.|++|||+. |++|+||+|+||+++.++.+|++|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 9999999999986532 124578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
. ......++..|+|||...+..++.++|+||+|+++|+|++|+.||+..... .....+.....+....
T Consensus 156 ~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~-- 223 (256)
T cd08530 156 N--MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--------DLRYKVQRGKYPPIPP-- 223 (256)
T ss_pred C--CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCCCCCch--
Confidence 3 223345788999999998888999999999999999999999998743211 1111122222222211
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
....++.+++.+|++.+|++||++.|++++-
T Consensus 224 -~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p 254 (256)
T cd08530 224 -IYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254 (256)
T ss_pred -hhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence 3345688999999999999999999999874
No 327
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.3e-34 Score=292.33 Aligned_cols=245 Identities=24% Similarity=0.286 Sum_probs=186.7
Q ss_pred ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHH-HHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKA-LTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.||+|+||.||+|.. .+|+.||+|.+++.... .......+..|..+ ....+|+|++++++++..++..++|+||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI-AKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh-HHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence 4689999999999965 46889999998753111 11222334455544 445589999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW 599 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 599 (708)
+++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++..... .
T Consensus 81 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~ 150 (260)
T cd05611 81 GGDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----N 150 (260)
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----c
Confidence 999999996543 478999999999999999999999 999999999999999999999999999875432 2
Q ss_pred ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHH
Q 039322 600 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLI 679 (708)
Q Consensus 600 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (708)
....++..|+|||...+..++.++||||+|+++|+|++|..||..... ..............+.........
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 222 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--------DAVFDNILSRRINWPEEVKEFCSP 222 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhcccCCCCcccccCCH
Confidence 234578899999999888889999999999999999999999863221 111111111111111111112234
Q ss_pred HHHHHHHhccCCCCCCCCCH---HHHHHH
Q 039322 680 SIMEVAFSCLNESPESRPTM---KVVTQQ 705 (708)
Q Consensus 680 ~l~~li~~cl~~dP~~RPs~---~evl~~ 705 (708)
.+.+++.+||+.+|++||++ +|++.|
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 68899999999999999966 566554
No 328
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.3e-35 Score=300.10 Aligned_cols=253 Identities=24% Similarity=0.329 Sum_probs=210.9
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
...|.+...||+|.|+.|..|.+ .++..||||.+.+.. -+......+.+|+++|+.++|||||+++.+.+.+..+|+
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~--ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQ--LNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcc--cChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 46789999999999999999965 469999999998743 233445568999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+.+|.+.+++..++. ........++.|+.+|++|||++ .|||||||++||+++.+.++||+|||++.++.
T Consensus 133 V~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec
Confidence 9999999999999987764 44588889999999999999999 99999999999999999999999999999887
Q ss_pred CCCCccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.........|++.|.|||+..+.++ .+++|+||+|+++|-|+.|..||+...... .-+..+.+++..+..
T Consensus 207 -~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--------Lr~rvl~gk~rIp~~ 277 (596)
T KOG0586|consen 207 -YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--------LRPRVLRGKYRIPFY 277 (596)
T ss_pred -ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc--------ccchheeeeecccce
Confidence 3455577899999999999998776 468999999999999999999999533211 112222233322221
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
. ..+..+++++++-.+|.+|++.+++.++-|+
T Consensus 278 m----s~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 278 M----SCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred e----echhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 1 1236688899999999999999999988764
No 329
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.6e-34 Score=288.08 Aligned_cols=250 Identities=27% Similarity=0.411 Sum_probs=203.8
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|++.+.||+|++|.||+|... +++.|++|.+...... ....+.+.+|++++++++|+|++++++++..++..+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEE
Confidence 4778899999999999999654 6789999999864321 245678999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++... ..+++..++.++.|++.|+.|||+. |++||||+|+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 79 EYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred ecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 999999999998654 3489999999999999999999999 9999999999999999999999999999877654
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
........++..|+|||...+..++.++||||+|+++|+|++|+.||...... ...........+..+.
T Consensus 153 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~--- 221 (254)
T cd06627 153 SKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM--------AALFRIVQDDHPPLPE--- 221 (254)
T ss_pred cccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHhccCCCCCCC---
Confidence 44334456889999999988877889999999999999999999998632210 0000111111111111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.....+.+++.+||+.+|++|||+.+++.+
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 123457889999999999999999999875
No 330
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.9e-34 Score=303.01 Aligned_cols=261 Identities=24% Similarity=0.349 Sum_probs=197.7
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC----
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA---- 508 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~---- 508 (708)
..++|+..+.||+|+||.||+|.. .+++.||+|.+..... .......+.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ--NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc--ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence 457899999999999999999965 4789999999875322 223455677899999999999999999988643
Q ss_pred --CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 509 --RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 509 --~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
...++||||+.+ +|.+.+... ++...+..++.|++.||+|||+. |++||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~lv~e~~~~-~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 92 EFQDVYLVMELMDA-NLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred ccCcEEEEEeccCC-CHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 357999999965 888877532 78899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------ccc-----
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLN----- 654 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~----- 654 (708)
|++....... ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||......... ...
T Consensus 163 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 163 GLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred ccceeCCCCC-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9998654322 223346788999999999989999999999999999999999998643211000 000
Q ss_pred -----------------cccccccccCCCC-CCCCc-hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 655 -----------------TDIALDEILDPRL-PPPSR-SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 655 -----------------~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
............. +.... ........+.+++.+||+.||++|||+.|++++=
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~ 312 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP 312 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence 0000000000000 00000 0112234578999999999999999999999874
No 331
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.1e-34 Score=296.42 Aligned_cols=264 Identities=22% Similarity=0.301 Sum_probs=197.0
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|++|.||+|... +|+.||+|.+..... .......+.+|++++++++|+||+++++++..++..++|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc--cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 57889999999999999999654 688999999865321 112345688899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEeecccccccC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL-EYEAHVADFGIAKFLK 593 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~a~~~~ 593 (708)
|||++ +++.+++..... ..+++..++.++.||+.||+|||++ +++||||+|+||+++. ++.+||+|||++....
T Consensus 80 ~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred Eeccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 99996 488888754432 3367888999999999999999999 9999999999999985 5679999999997654
Q ss_pred CCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------ccc------cc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------TDI------AL 659 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------~~~------~~ 659 (708)
..........++..|+|||++.+. .++.++||||+|+++|+|+||+.||............ ... ..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 155 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred CCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc
Confidence 333333445678899999988664 4788999999999999999999998643211000000 000 00
Q ss_pred cccc--CCCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 660 DEIL--DPRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 660 ~~~~--~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.... .+...... .........+.+++.+|++.+|++||++.+++++=
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~ 285 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHE 285 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0000 00000000 00111234578899999999999999999999864
No 332
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.3e-35 Score=278.81 Aligned_cols=203 Identities=23% Similarity=0.340 Sum_probs=170.4
Q ss_pred ccccccceeccccCccEEEEEe-C--C--CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee-CC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-P--S--GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH-AR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~--~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~~ 509 (708)
..|+....||+|.||.||+|.- + + .+.+|+|+|+.... ...-.....+|+.+++.++|||++.+..+|.. +.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd--~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD--GTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC--CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 5788999999999999999932 2 2 23799999986422 22224467789999999999999999999876 78
Q ss_pred eeEEEEEeccCCCHHHHhcccc--cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC----CcEEE
Q 039322 510 HSFLVYELLERGSLAAILSSDT--AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE----YEAHV 583 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~----~~~kl 583 (708)
..++++||.+. +|...++-++ ..+.++...+..|+.||..|+.|||++ =|+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 89999999988 9999886544 345689999999999999999999999 68999999999999888 89999
Q ss_pred eecccccccCCCCC---ccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCc
Q 039322 584 ADFGIAKFLKPESS---NWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDF 644 (708)
Q Consensus 584 ~Dfg~a~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~ 644 (708)
+|+|+|+.+...-. .....+.|..|.|||.+.+.+ |+.+.||||.||++.||+|.++-|..
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 99999998865432 224567899999999988765 88999999999999999998887754
No 333
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=320.13 Aligned_cols=257 Identities=25% Similarity=0.420 Sum_probs=206.8
Q ss_pred hccccccceeccccCccEEEEEeC----C----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP----S----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC 505 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~ 505 (708)
.++..+.+.+|+|.||.|++|... . ...||||+++... ...+.+.+..|+++|+.+ +|+||+.++|+|
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~---~~~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA---SSSEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc---CcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 345566679999999999999542 1 4579999998643 225678899999999999 599999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhcccc-----------cc--cCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDT-----------AA--QELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~--~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 572 (708)
...+..++|+||+..|+|.++++..+ .. ..++..+.+.++.|||.|++||++. ++|||||.++|
T Consensus 372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRN 448 (609)
T KOG0200|consen 372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARN 448 (609)
T ss_pred ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhhh
Confidence 99999999999999999999997665 01 2388999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCcc-cccc--ccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccc
Q 039322 573 LLLDLEYEAHVADFGIAKFLKPESSNW-TEFA--GTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLI 648 (708)
Q Consensus 573 ill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~--~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~ 648 (708)
||++.+..+||+|||+|+...+..... .... -...|||||.+....++.++||||||+++||++| |..||.....
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~- 527 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP- 527 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-
Confidence 999999999999999999765544433 2222 2467999999999999999999999999999998 8999863110
Q ss_pred cccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 649 SSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+.+.++.....+..+.+ +++++++.||+.+|++||++.|+.+.+.
T Consensus 528 ------~~~l~~~l~~G~r~~~P~~c~~---eiY~iM~~CW~~~p~~RP~F~~~~~~~~ 577 (609)
T KOG0200|consen 528 ------TEELLEFLKEGNRMEQPEHCSD---EIYDLMKSCWNADPEDRPTFSECVEFFE 577 (609)
T ss_pred ------HHHHHHHHhcCCCCCCCCCCCH---HHHHHHHHHhCCCcccCCCHHHHHHHHH
Confidence 1122333444444344444433 4678888999999999999999998764
No 334
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.6e-34 Score=289.04 Aligned_cols=254 Identities=22% Similarity=0.311 Sum_probs=198.4
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCc-chhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--Cee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPC-DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~ 511 (708)
.+|++.+.||+|++|.||+|.. .+++.||+|.+...... ........+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4788999999999999999965 46899999987542211 1223456789999999999999999999998764 468
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++++||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999986543 378899999999999999999999 999999999999999999999999999986
Q ss_pred cCCC---CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 592 LKPE---SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 592 ~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
.... ........++..|+|||++.+..++.++|+||||+++|+|++|+.||...... ............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~ 227 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM--------AAIFKIATQPTK 227 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH--------HHHHHHHcCCCC
Confidence 5321 11123346789999999998888899999999999999999999998632211 111111111110
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
+ .........+.+++.+||+ +|.+||++.+++.|.
T Consensus 228 ~--~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 228 P--MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred C--CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 0 1111223457888999999 579999999998874
No 335
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-35 Score=304.99 Aligned_cols=254 Identities=27% Similarity=0.389 Sum_probs=198.5
Q ss_pred cccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC------
Q 039322 437 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR------ 509 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~------ 509 (708)
-|...+.||+|+||.||+|+ -.+|+.||||.++... .....+...+|++++++++|+|||++++.-+...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~---~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES---SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc---ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 45566779999999999997 4579999999998732 3455778889999999999999999998875543
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC--CCCc--EEEee
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD--LEYE--AHVAD 585 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~--~~~~--~kl~D 585 (708)
...+|||||.+|+|...+........+++.+.+.++.+++.||.|||++ ||+||||||.||++- ++|+ .||+|
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeec
Confidence 5689999999999999999888778899999999999999999999999 999999999999994 3343 69999
Q ss_pred cccccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccc------c-------
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS------S------- 651 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~------~------- 651 (708)
||.|+..+++ +.....+||..|.+||+... +.|+..+|.|||||++|+++||..||........ .
T Consensus 168 fG~Arel~d~-s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~ 246 (732)
T KOG4250|consen 168 FGAARELDDN-SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPS 246 (732)
T ss_pred ccccccCCCC-CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCC
Confidence 9999987644 47788999999999999884 7788899999999999999999999964322100 0
Q ss_pred ----ccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC
Q 039322 652 ----SLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRP 697 (708)
Q Consensus 652 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 697 (708)
.......-.-.....++.+..........+...+..++..+|++|-
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 0000011111112233444344444455566666677777777776
No 336
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=5.3e-34 Score=296.86 Aligned_cols=266 Identities=20% Similarity=0.271 Sum_probs=196.5
Q ss_pred cccccceeccccCccEEEEEeC---CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--Cee
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHS 511 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~ 511 (708)
+|++.+.||+|++|.||+|... +++.||+|.+..... ......+.+.+|+.++++++||||+++++++... +..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE-QYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc-cccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceE
Confidence 4778889999999999999664 478999999886321 1112245678899999999999999999999888 789
Q ss_pred EEEEEeccCCCHHHHhccccc--ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC----CCcEEEee
Q 039322 512 FLVYELLERGSLAAILSSDTA--AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL----EYEAHVAD 585 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~----~~~~kl~D 585 (708)
++||||+++ ++.+++..... ...+++..++.++.|++.|++|||+. +++||||||+||+++. ++.+||+|
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~D 155 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGD 155 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECC
Confidence 999999975 77776643322 23588999999999999999999999 9999999999999999 89999999
Q ss_pred cccccccCCCCC---ccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-ccccc--
Q 039322 586 FGIAKFLKPESS---NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-NTDIA-- 658 (708)
Q Consensus 586 fg~a~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-~~~~~-- 658 (708)
||++........ ......++..|+|||.+.+. .++.++||||||+++|+|++|+.||........... .....
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 999986543322 12334678899999987664 478899999999999999999999874322110000 00000
Q ss_pred ----------------------cc----cccCCCCCCCCc-hhH----HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 ----------------------LD----EILDPRLPPPSR-SVQ----EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ----------------------~~----~~~~~~~~~~~~-~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .......+.... ... .....+.+++.+|++.||++|||+.|+++|-+
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~ 315 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCC
Confidence 00 000000000000 000 12346889999999999999999999998743
No 337
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.2e-34 Score=293.65 Aligned_cols=259 Identities=20% Similarity=0.229 Sum_probs=184.2
Q ss_pred ccccccceeccccCccEEEEEeCC----CcEEEEEEcCCCCCcchhHh-------HHHHHHHHHHHHhccCCceeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIAD-------QKEFLIEVKALTEIRHRNIVKFYGF 504 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~iv~l~~~ 504 (708)
++|.+.+.||+|+||.||+|...+ +..+|+|+..........+. ......+...+..+.|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 689999999999999999997644 34566776433211100000 0112233444566789999999997
Q ss_pred EeeCC----eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc
Q 039322 505 CSHAR----HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE 580 (708)
Q Consensus 505 ~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 580 (708)
+.... ..++++|++.. ++.+.++... ..++..+..++.|++.||+|||++ +++||||||+||+++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCc
Confidence 76543 34678887744 6766664322 257788999999999999999999 9999999999999999999
Q ss_pred EEEeecccccccCCCCC-------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccc-cc
Q 039322 581 AHVADFGIAKFLKPESS-------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS-SS 652 (708)
Q Consensus 581 ~kl~Dfg~a~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~-~~ 652 (708)
++|+|||+|+.+..... ......||+.|+|||+..+..++.++|||||||++|||++|+.||........ ..
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999986643221 11234689999999999999999999999999999999999999974421110 00
Q ss_pred cccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.........+..+....+ ..+..+.+++..||+.+|++||+++++++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAKCDFIKRLHEGKIKIK-----NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhHHHHHHHhhhhhhccC-----CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 000111122222222111 1134578889999999999999999999876
No 338
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.7e-34 Score=295.86 Aligned_cols=256 Identities=24% Similarity=0.363 Sum_probs=195.8
Q ss_pred hccccccceeccccCccEEEEEeCC-CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~ 512 (708)
.++|++.+.||+|++|.||+|..++ ++.||||.++... .......+..|+.++.+.. |+||+++++++..+...+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC---ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 3678999999999999999997754 8899999987532 1223456677777766664 999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
++|||+.+ ++.+++.... ..+++..+..++.|++.|++|||+.. +++||||+|+||+++.++.+||+|||++...
T Consensus 91 ~v~e~~~~-~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 91 ICMELMST-CLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred EEeeccCc-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 99999854 7777765432 35899999999999999999999732 8999999999999999999999999999765
Q ss_pred CCCCCccccccccccccCccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMK----ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
.... ......++..|+|||.+.+.. ++.++||||||+++|+|++|+.||...... ............+
T Consensus 166 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~ 237 (296)
T cd06618 166 VDSK-AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEEPP 237 (296)
T ss_pred cCCC-cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCCCC
Confidence 4322 223345778999999987553 788999999999999999999998632110 1111111221111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+ .......++.+++.+||+.||++||++.+++++-+
T Consensus 238 ~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 238 SLP-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred CCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 110 00122346889999999999999999999998754
No 339
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-34 Score=316.73 Aligned_cols=270 Identities=17% Similarity=0.197 Sum_probs=188.7
Q ss_pred HhccccccceeccccCccEEEEEeCC--CcEEEEEEcCCC-------------CCcchhHhHHHHHHHHHHHHhccCCce
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELPS--GQVVAIKKFHSP-------------LPCDQIADQKEFLIEVKALTEIRHRNI 498 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~~--~~~vavK~~~~~-------------~~~~~~~~~~~~~~e~~~l~~l~h~~i 498 (708)
..++|++.+.||+|+||.||++..+. +..++.|.+... ...........+.+|++++++++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35789999999999999999985432 222222211100 000111234568899999999999999
Q ss_pred eeEEEEEeeCCeeEEEEEeccCCCHHHHhccccc--ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 039322 499 VKFYGFCSHARHSFLVYELLERGSLAAILSSDTA--AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 499 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 576 (708)
+++++++..++..|+|+|++.+ ++.+++..... ........+..++.|++.||+|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 9999999999999999999854 77777653321 12234667888999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCC-Ccccccccccc-
Q 039322 577 LEYEAHVADFGIAKFLKPESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPR-DFLSLISSSSL- 653 (708)
Q Consensus 577 ~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~-~~~~~~~~~~~- 653 (708)
.++.+||+|||++..+...... .....|+..|+|||++.+..++.++|||||||++|||++|+.++ ...........
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 9999999999999876543322 23457899999999999989999999999999999999987643 22111000000
Q ss_pred --------cccc------ccccccC-CCCCCCCchhH------HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 --------NTDI------ALDEILD-PRLPPPSRSVQ------EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 --------~~~~------~~~~~~~-~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.... ....+++ ........... .....+.+++.+|++.||++|||+.|+++|-+
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 0000 0000000 00000000000 01234677889999999999999999998744
No 340
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.9e-34 Score=291.98 Aligned_cols=245 Identities=24% Similarity=0.346 Sum_probs=195.3
Q ss_pred eccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCC
Q 039322 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGS 522 (708)
Q Consensus 444 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~ 522 (708)
||+|+||.||++... +|+.||+|.+..... ......+.+.+|++++++++|+||+++++.+..++..++++||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM-IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhh-hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999765 489999999875321 112446678899999999999999999999999999999999999999
Q ss_pred HHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCC-----
Q 039322 523 LAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS----- 597 (708)
Q Consensus 523 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~----- 597 (708)
|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 80 L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 80 LASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 999997543 489999999999999999999999 999999999999999999999999999875443311
Q ss_pred ---ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 598 ---NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 598 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
......++..|+|||.......+.++||||||+++|++++|+.||..... ..............+...
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~- 224 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP--------EEIFQNILNGKIEWPEDV- 224 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCCcCCCccc-
Confidence 22344578899999999888889999999999999999999999863321 111112222122111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCH---HHHHHH
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTM---KVVTQQ 705 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~---~evl~~ 705 (708)
.....+.+++.+||+.+|++|||+ .+++++
T Consensus 225 -~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 225 -EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred -cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 023457899999999999999999 666654
No 341
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-34 Score=295.52 Aligned_cols=255 Identities=22% Similarity=0.285 Sum_probs=197.2
Q ss_pred cccccceeccccCccEEEEEe----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCee
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~ 511 (708)
+|++.+.||+|+||.||.|.. .+|+.||+|+++...........+.+..|+++++++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477888999999999999965 368899999987532222223456788899999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999996543 478899999999999999999998 999999999999999999999999999976
Q ss_pred cCCCCC-ccccccccccccCccccccC--CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 592 LKPESS-NWTEFAGTYGYVAPELAYTM--KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 592 ~~~~~~-~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
...... ......++..|+|||.+... .++.++||||||+++|+|++|+.||...... ...............+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~----~~~~~~~~~~~~~~~~ 230 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSEPP 230 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc----ccHHHHHHHhhccCCC
Confidence 543321 12235578899999988753 4678999999999999999999998632110 0001111111111111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQ 705 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 705 (708)
.+ ......+.+++.+||+.||++|| ++++++.+
T Consensus 231 ~~----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 231 YP----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred CC----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 11 11233577899999999999997 78888765
No 342
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.6e-34 Score=302.86 Aligned_cols=261 Identities=24% Similarity=0.364 Sum_probs=195.1
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA----- 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 508 (708)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... .......+.+|+.++++++|+||+++++++...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE---HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF 80 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence 46899999999999999999964 578999999986421 123345678899999999999999999987544
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
...++|+||+.+ ++.+++... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 81 NDVYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred ceEEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 357999999975 888877543 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc---cccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cccccc
Q 039322 589 AKFLKPESSN---WTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLNTDI 657 (708)
Q Consensus 589 a~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~~~~ 657 (708)
+......... .....++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||......... ......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 9765432221 123467889999998654 45888999999999999999999999643211000 000000
Q ss_pred ccccccCCC-------CCCC-C----chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 658 ALDEILDPR-------LPPP-S----RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 658 ~~~~~~~~~-------~~~~-~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
....+.... .+.. . ...+.....+.+++.+||+.||++|||+.|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp 293 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHP 293 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 000000000 0000 0 00112234688999999999999999999999873
No 343
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.8e-34 Score=293.59 Aligned_cols=262 Identities=25% Similarity=0.350 Sum_probs=198.0
Q ss_pred ccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--CeeEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHSFLV 514 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~~lv 514 (708)
|++.+.||+|++|.||+|... +++.+|+|.+.... ........+.+|++++++++|+|++++++++... +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence 567889999999999999765 58899999998643 1223345688899999999999999999999888 889999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
+||+++ +|.+++.... ..+++..++.++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+.....
T Consensus 79 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 79 FEYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred eccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 999975 8988886542 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-ccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc----------ccccccccc-
Q 039322 595 ESS-NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS----------LNTDIALDE- 661 (708)
Q Consensus 595 ~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~----------~~~~~~~~~- 661 (708)
... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||+......... .........
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 332 1233456788999997765 457889999999999999999999986432110000 000000000
Q ss_pred ----ccCCCCCCCCc---hhHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ----ILDPRLPPPSR---SVQE-KLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ----~~~~~~~~~~~---~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........... .... ....+.+++.+||+.+|++||++++++++-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~ 286 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcC
Confidence 00000000000 0001 1456889999999999999999999998754
No 344
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=7.3e-34 Score=296.87 Aligned_cols=258 Identities=19% Similarity=0.245 Sum_probs=192.3
Q ss_pred ceeccc--cCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEec
Q 039322 442 YCIGNG--GHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELL 518 (708)
Q Consensus 442 ~~ig~G--~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~ 518 (708)
..||+| +||+||+|.. .+|+.||+|.+..... .....+.+.+|+.+++.++||||++++++|..++..++|+||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC--TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecc
Confidence 346666 8899999965 4799999999875322 2234578899999999999999999999999999999999999
Q ss_pred cCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 039322 519 ERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598 (708)
Q Consensus 519 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 598 (708)
.+|++.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+.........
T Consensus 82 ~~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 82 AYGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred cCCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 99999999876432 3478999999999999999999998 9999999999999999999999999865433221111
Q ss_pred c-------ccccccccccCccccccC--CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc--cc----------c-
Q 039322 599 W-------TEFAGTYGYVAPELAYTM--KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL--NT----------D- 656 (708)
Q Consensus 599 ~-------~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~--~~----------~- 656 (708)
. ....++..|+|||++.+. .++.++||||+||++|||++|+.||........... .. .
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd08226 158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFP 237 (328)
T ss_pred ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccc
Confidence 0 112345679999998763 478899999999999999999999864321000000 00 0
Q ss_pred c---------------ccc---------cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 I---------------ALD---------EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~---------------~~~---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ... ........ ..........+.+++++||+.||++|||++|++++-+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 238 CEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR--TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred hhhhhhccchhhhhcccccchhcccccccccccccc--chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 0 000 00000000 0112234557889999999999999999999998754
No 345
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.3e-33 Score=289.70 Aligned_cols=261 Identities=24% Similarity=0.315 Sum_probs=196.2
Q ss_pred ccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc---cCCceeeEEEEEeeCCe---
Q 039322 438 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI---RHRNIVKFYGFCSHARH--- 510 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~iv~l~~~~~~~~~--- 510 (708)
|++.+.||+|+||.||+|..+ +++.||+|.++..... ......+.+|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE--EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc--chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 567889999999999999775 4899999999754321 12234566787777666 59999999999988776
Q ss_pred --eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 511 --SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 511 --~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
.+++|||+.+ +|.+++..... ..+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||.
T Consensus 79 ~~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 79 LKLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred ceeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCc
Confidence 8999999975 89998865432 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc--------ccc--c
Q 039322 589 AKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN--------TDI--A 658 (708)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~--------~~~--~ 658 (708)
+..+.... ......++..|+|||.+.+..++.++||||||+++|||++|+.||+........... ... .
T Consensus 154 ~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 154 ARIYSFEM-ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ceeccCCc-ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCC
Confidence 98764332 223345788999999999888999999999999999999999998743211000000 000 0
Q ss_pred c----ccccCCCCC-CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 659 L----DEILDPRLP-PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 659 ~----~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
. ......... ............+.+++.+||+.||++||+++|++++=
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~ 285 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHP 285 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCc
Confidence 0 000000000 11111123345678999999999999999999999863
No 346
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.9e-34 Score=287.39 Aligned_cols=252 Identities=21% Similarity=0.289 Sum_probs=193.1
Q ss_pred HHHHHHhcccccccee--ccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEE
Q 039322 429 DEIVRATNDFDAQYCI--GNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGF 504 (708)
Q Consensus 429 ~~~~~~~~~~~~~~~i--g~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~ 504 (708)
.+.....++|++.+.+ |+|+||.||++.. .+++.+|+|.+..... ... |+.....+ +|+||++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~----~~~-----e~~~~~~~~~h~~iv~~~~~ 77 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF----NAI-----EPMVHQLMKDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhc----chh-----hHHHHHHhhcCCCEEEEEEE
Confidence 3444555777887776 9999999999964 4688899999865211 111 22222222 69999999999
Q ss_pred EeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEE
Q 039322 505 CSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHV 583 (708)
Q Consensus 505 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl 583 (708)
+..++..++||||+++|+|.+++.... .+++.++..++.|+++|++|||+. +++||||+|+||+++.++ .++|
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l 151 (267)
T PHA03390 78 VTTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYL 151 (267)
T ss_pred EecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEE
Confidence 999999999999999999999997543 589999999999999999999999 999999999999999998 9999
Q ss_pred eecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 039322 584 ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEIL 663 (708)
Q Consensus 584 ~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 663 (708)
+|||.+...... ....++..|+|||++.+..++.++||||+|+++|||++|+.||....... .. ........
T Consensus 152 ~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~---~~-~~~~~~~~ 223 (267)
T PHA03390 152 CDYGLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE---LD-LESLLKRQ 223 (267)
T ss_pred ecCccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch---hh-HHHHHHhh
Confidence 999998765422 22357889999999998889999999999999999999999987322110 00 00111111
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHhh
Q 039322 664 DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPT-MKVVTQQVR 707 (708)
Q Consensus 664 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~l~ 707 (708)
..... ........+.+++.+||+.+|.+||+ ++|+++|=+
T Consensus 224 ~~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~ 264 (267)
T PHA03390 224 QKKLP----FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPF 264 (267)
T ss_pred cccCC----cccccCHHHHHHHHHHhccChhhCCchHHHHhcCCc
Confidence 11111 11133456889999999999999996 699998743
No 347
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.8e-34 Score=302.47 Aligned_cols=263 Identities=24% Similarity=0.324 Sum_probs=198.4
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA----- 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 508 (708)
.++|.+.+.||+|+||.||+|.. .+++.||||.+..... .......+.+|+.+++.++|+||+++++++...
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD--NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAF 81 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCccchHHheeccccccc
Confidence 46799999999999999999964 4689999999875321 223345677899999999999999999988654
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
...++|+||+. ++|.+++... ..+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 82 NDVYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred CcEEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcc
Confidence 34799999996 6899888654 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccc---------------ccc
Q 039322 589 AKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLIS---------------SSS 652 (708)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~---------------~~~ 652 (708)
+..............++..|+|||.+.. ..++.++||||||+++|+|++|+.||....... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 155 ARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred ccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 9866443333344567889999998764 458899999999999999999999986432100 000
Q ss_pred cccccccccccCC--CCCCC--CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 653 LNTDIALDEILDP--RLPPP--SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 653 ~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
............. ..... ..........+.+++.+||+.+|++|||++|+++|-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~ 292 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHP 292 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCc
Confidence 0000000000000 00000 001112345678999999999999999999999874
No 348
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=5.5e-34 Score=291.74 Aligned_cols=263 Identities=24% Similarity=0.309 Sum_probs=202.6
Q ss_pred ccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|++.+.||+|++|.||+|... +++.+++|.+...... ......+..|++++++++|++|+++++++..++..++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES--EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc--chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence 566788999999999999654 6889999998764322 1345678889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+++ ++.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 79 FMDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred ccCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 9975 8888886543 4589999999999999999999999 99999999999999999999999999998765543
Q ss_pred CccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------ccccccccc-----
Q 039322 597 SNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------TDIALDEIL----- 663 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------~~~~~~~~~----- 663 (708)
.......++..|+|||.+.+. .++.++|+||+|+++|+|+||+.||............ .........
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARN 232 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhh
Confidence 233345678899999998776 6889999999999999999999998643321100000 000000000
Q ss_pred ------CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 664 ------DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 664 ------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.................+.+++.+||++||.+||++++++.+-+|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 233 YKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 000001011122345678899999999999999999999987553
No 349
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.9e-34 Score=295.78 Aligned_cols=255 Identities=22% Similarity=0.291 Sum_probs=196.0
Q ss_pred cccccceeccccCccEEEEEe----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCee
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~ 511 (708)
+|++.+.||+|++|.||++.. .+++.||||++++..........+.+..|+++++++ +|++|+++++.+..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 467788999999999999964 357889999987532222223456788999999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 9999999999999998643 3478999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCCCc-cccccccccccCccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 592 LKPESSN-WTEFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 592 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
....... .....++..|+|||...+.. .+.++||||||+++|||++|..||....... ..............+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~ 230 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN----SQSEISRRILKSKPP 230 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc----hHHHHHHHHHccCCC
Confidence 5433222 22345789999999987655 7789999999999999999999986322110 000111111111111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.+. .....+.+++.+||+.||++|||+.++.+.
T Consensus 231 ~~~----~~~~~l~~li~~~l~~~p~~R~t~~~~~~~ 263 (288)
T cd05583 231 FPK----TMSAEARDFIQKLLEKDPKKRLGANGADEI 263 (288)
T ss_pred CCc----ccCHHHHHHHHHHhcCCHhhccCcchHHHH
Confidence 111 122357889999999999999997766443
No 350
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=6.8e-34 Score=290.91 Aligned_cols=259 Identities=20% Similarity=0.265 Sum_probs=193.0
Q ss_pred ccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeC--CeeEE
Q 039322 438 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHA--RHSFL 513 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~--~~~~l 513 (708)
|++.+.||+|+||.||+|.. .+++.||+|.++..... ........|+.+++++. |+|++++++++.++ +..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS---LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCC---chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence 56778899999999999965 46889999998763221 12233457888888885 99999999999887 88999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
|+||++ |++.+++.... ..+++.+++.++.|++.||+|||+. +++||||+|+||+++. +.+||+|||++....
T Consensus 78 v~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 78 VFELMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred EEecCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 999997 48888876433 3589999999999999999999999 9999999999999999 999999999998664
Q ss_pred CCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------ccccccc-----cc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLNTDIA-----LD 660 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~~~~~-----~~ 660 (708)
.... .....++..|+|||+... ..++.++||||+||++|||++|+.||......... ....... ..
T Consensus 151 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07831 151 SKPP-YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKS 229 (282)
T ss_pred cCCC-cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccc
Confidence 3322 233457889999997644 55788999999999999999999999643221100 0000000 00
Q ss_pred cccCCCCCCCC-----chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPS-----RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+...+... ......+..+.+++.+||+++|++||++++++++=+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~ 281 (282)
T cd07831 230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281 (282)
T ss_pred ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCC
Confidence 00000000000 001123467899999999999999999999998744
No 351
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.7e-34 Score=302.40 Aligned_cols=265 Identities=25% Similarity=0.341 Sum_probs=199.7
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee----CC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH----AR 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----~~ 509 (708)
..+|++.+.||+|++|.||+|.. .+|+.||+|.+..... .....+.+.+|+.++++++||||+++++++.. ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD--VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc--cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCc
Confidence 37899999999999999999964 4699999999875322 22335667789999999999999999998753 34
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
..++||||+. |+|.+++.... .+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred eEEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccc
Confidence 6899999996 58999886443 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----ccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------ccc---
Q 039322 590 KFLKPESS----NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLN--- 654 (708)
Q Consensus 590 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~--- 654 (708)
........ ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......... +..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred eeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 76543221 1123467889999998765 45788999999999999999999999643221000 000
Q ss_pred -----cccccccccC---CCCCCC-CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 655 -----TDIALDEILD---PRLPPP-SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 655 -----~~~~~~~~~~---~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.........+ .....+ .......+..+.+++.+||+.+|++|||+++++++-++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~ 297 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL 297 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhh
Confidence 0000000000 000000 00112234568899999999999999999999987653
No 352
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.8e-34 Score=297.54 Aligned_cols=261 Identities=17% Similarity=0.218 Sum_probs=191.9
Q ss_pred ccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 440 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 440 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.+.+|.|+++.||++.. +++.||+|++.... ......+.+..|++++++++|+||+++++++...+..+++|||++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~ 82 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDS--CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMA 82 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccc--cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccC
Confidence 334445555555555544 68999999987632 123456789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCC--
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS-- 597 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 597 (708)
+|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|++|||.+........
T Consensus 83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~ 158 (314)
T cd08216 83 YGSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ 158 (314)
T ss_pred CCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccc
Confidence 9999999976532 3478999999999999999999999 999999999999999999999999998875532221
Q ss_pred -----ccccccccccccCcccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc--cc-------cccc----
Q 039322 598 -----NWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS--SL-------NTDI---- 657 (708)
Q Consensus 598 -----~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~--~~-------~~~~---- 657 (708)
......++..|+|||++.. ..++.++||||+|+++|||++|+.||......... .. ....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhh
Confidence 1123456778999999865 34788999999999999999999999743211000 00 0000
Q ss_pred ---cccc----ccCCC--CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ---ALDE----ILDPR--LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ---~~~~----~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.... ..++. ..............+.+++.+||+.||++|||++|++++-.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 0000 00000 00011111223346888999999999999999999998754
No 353
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.6e-34 Score=293.69 Aligned_cols=253 Identities=25% Similarity=0.356 Sum_probs=204.0
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~l 513 (708)
++|.+.+.||+|++|.||+|... +++.||+|++..... ......+.+..|.+++++++ |+||+++++++..++..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQL-IKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhc-cchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence 46888999999999999999654 789999999875221 12233567889999999998 9999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.+++.... .+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 80 v~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 80 VLEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999997543 489999999999999999999999 99999999999999999999999999988654
Q ss_pred CCCC--------------------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc
Q 039322 594 PESS--------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL 653 (708)
Q Consensus 594 ~~~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~ 653 (708)
.... ......++..|+|||......++.++||||+|++++++++|+.||.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------ 227 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE------ 227 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH------
Confidence 3221 12234568899999998888889999999999999999999999874321
Q ss_pred ccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCH----HHHHHHhh
Q 039322 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTM----KVVTQQVR 707 (708)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~l~ 707 (708)
..............+. .....+.+++.+||+.+|++||++ +++++|-.
T Consensus 228 --~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~ 279 (280)
T cd05581 228 --YLTFQKILKLEYSFPP----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279 (280)
T ss_pred --HHHHHHHHhcCCCCCC----ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence 1111222222211111 113457899999999999999999 99988753
No 354
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.3e-34 Score=290.08 Aligned_cols=247 Identities=19% Similarity=0.196 Sum_probs=187.2
Q ss_pred eeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHH---HHHhccCCceeeEEEEEeeCCeeEEEEEec
Q 039322 443 CIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVK---ALTEIRHRNIVKFYGFCSHARHSFLVYELL 518 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~---~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~ 518 (708)
.||+|+||.||+|.. .+++.||+|.+.+..... ......+..|.. .++...||+|+.+.+++..++..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeecccccc-chhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence 489999999999965 468899999987532111 111222334433 344457999999999999999999999999
Q ss_pred cCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 039322 519 ERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598 (708)
Q Consensus 519 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 598 (708)
.+|+|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++...... .
T Consensus 80 ~g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~ 151 (278)
T cd05606 80 NGGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--K 151 (278)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--C
Confidence 999999988643 3489999999999999999999998 9999999999999999999999999998755322 2
Q ss_pred cccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHH
Q 039322 599 WTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677 (708)
Q Consensus 599 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (708)
.....|+..|+|||.+.++ .++.++||||+|+++|||++|+.||......... .............+ ...
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~ 222 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-----EIDRMTLTMAVELP----DSF 222 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH-----HHHHHhhccCCCCC----CcC
Confidence 2334688999999998754 5889999999999999999999998743211100 00000100111111 112
Q ss_pred HHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 678 LISIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 678 ~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
...+.+++.+|+..+|.+|| ++.+++++-+
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~ 257 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPF 257 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcc
Confidence 34688899999999999999 9999998743
No 355
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-36 Score=328.65 Aligned_cols=254 Identities=28% Similarity=0.384 Sum_probs=203.7
Q ss_pred HhccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
.+-+|.....||.|.||.||.| ...+|+..|+|-++-.... ....+...+|+.++..++|||+|+++|+-.+.+..+
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 3456777889999999999999 4567999999988764322 344567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
|.||||++|+|.+.+...+. .++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++|||.|..+
T Consensus 1311 IFMEyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEe
Confidence 99999999999999965543 56677778899999999999999 9999999999999999999999999999987
Q ss_pred CCCCC----ccccccccccccCccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 039322 593 KPESS----NWTEFAGTYGYVAPELAYTMK---ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665 (708)
Q Consensus 593 ~~~~~----~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 665 (708)
..... ......||+.|||||++.+.. ...++||||+||++.||+||+.||...+..+ ..+..+--+
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~-------aIMy~V~~g 1457 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW-------AIMYHVAAG 1457 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh-------HHHhHHhcc
Confidence 65432 234578999999999998643 5568999999999999999999986433222 122222222
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
..+.-++. ...+-.+++.+|+..||++|-++.|++++
T Consensus 1458 h~Pq~P~~---ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1458 HKPQIPER---LSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred CCCCCchh---hhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 33332222 23345677779999999999999999876
No 356
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4.1e-34 Score=300.05 Aligned_cols=262 Identities=24% Similarity=0.362 Sum_probs=197.0
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeC--C
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHA--R 509 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~--~ 509 (708)
..++|++.+.||+|+||.||+|... +++.||+|++..... .......+.+|+.+++++ +|+||+++++++... .
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR--NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC--cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 3578999999999999999999654 688999998865321 123345677899999999 999999999998654 3
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
..++||||+. ++|.+++... .+++..+..++.|++.||+|||+. |++||||+|+||+++.++.+||+|||.+
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~ 154 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLA 154 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccch
Confidence 6899999997 4999988653 478899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-----ccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------ccc--
Q 039322 590 KFLKPESS-----NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLN-- 654 (708)
Q Consensus 590 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~-- 654 (708)
........ ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07852 155 RSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA 234 (337)
T ss_pred hccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 86543321 2233467889999998755 45788999999999999999999998642211000 000
Q ss_pred ----------cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 655 ----------TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 655 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
..........................+.+++.+||+.||++|||+.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000011111111111111124568899999999999999999999986
No 357
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5.4e-34 Score=294.69 Aligned_cols=267 Identities=24% Similarity=0.333 Sum_probs=198.6
Q ss_pred HHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC--
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR-- 509 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~-- 509 (708)
+..++|++.+.||+|+||.||+|..+ +|+.||+|.++..... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~ 81 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA 81 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc--cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh
Confidence 45688999999999999999999764 5889999998753221 123456778999999999999999999987654
Q ss_pred --------eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 039322 510 --------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA 581 (708)
Q Consensus 510 --------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 581 (708)
..++|+||+++ ++.+.+.... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.+
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~ 155 (302)
T cd07864 82 LDFKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQI 155 (302)
T ss_pred hhccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcE
Confidence 78999999986 7777775432 3589999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCC-ccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc------
Q 039322 582 HVADFGIAKFLKPESS-NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL------ 653 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~------ 653 (708)
||+|||.+........ ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...........
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T cd07864 156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCG 235 (302)
T ss_pred EeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9999999986654332 1223356788999998765 3468899999999999999999999874321100000
Q ss_pred -ccccccccc--------cCCCCCC--C-CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 -NTDIALDEI--------LDPRLPP--P-SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 -~~~~~~~~~--------~~~~~~~--~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+ .++.... . .......+..+.+++.+||+.||.+||++++++++-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 301 (302)
T cd07864 236 SPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301 (302)
T ss_pred CCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 000000000 0000000 0 0000012346889999999999999999999998754
No 358
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6.5e-34 Score=294.44 Aligned_cols=251 Identities=28% Similarity=0.401 Sum_probs=196.3
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+.|...+.||+|++|.||+|... +++.+|+|.+...... ......++.+|+++++.++|+|++++.+++..++..++|
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 45777888999999999999654 6788999998642111 223345788899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 94 MEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EEccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 99996 58888775433 3478999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 595 ESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
. ....++..|+|||.+. .+.++.++||||||+++|+|++|+.||...... .....+.....+..
T Consensus 168 ~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~- 234 (308)
T cd06634 168 A----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNESPAL- 234 (308)
T ss_pred c----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--------HHHHHHhhcCCCCc-
Confidence 2 2345788999999874 345788999999999999999999997632211 11111111111110
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+.+++.+||+.+|++||++++++++-+
T Consensus 235 -~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 235 -QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred -CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 11123345789999999999999999999998765
No 359
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.4e-33 Score=292.47 Aligned_cols=248 Identities=28% Similarity=0.400 Sum_probs=193.3
Q ss_pred ccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|...+.||+|+||.||+|.. .+++.||+|.+..... ........+..|++++++++|+|++++++++.+.+..++|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGK-QTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEecccc-CchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 55567799999999999965 4688999999865322 122344578889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+. |++.+++.... ..+++.++..++.|++.|++|||+. |++||||+|+||+++.++.+||+|||++.....
T Consensus 102 ~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 102 YCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred cCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 996 57888775433 4588999999999999999999999 999999999999999999999999999864322
Q ss_pred CccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 597 SNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.....++..|+|||++. .+.++.++||||||+++|+|++|..||....... ..........+.. .
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~--~ 241 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--------ALYHIAQNDSPTL--Q 241 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHhcCCCCC--C
Confidence 22346788999999874 3567889999999999999999999986322111 0000100011100 0
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.......+.+++.+||+++|++||++.+++++-
T Consensus 242 ~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~ 274 (313)
T cd06633 242 SNEWTDSFRGFVDYCLQKIPQERPASAELLRHD 274 (313)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 111223578899999999999999999999864
No 360
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=8.9e-34 Score=297.36 Aligned_cols=265 Identities=23% Similarity=0.263 Sum_probs=194.6
Q ss_pred cccc-ccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhH----------hHHHHHHHHHHHHhccCCceeeEEE
Q 039322 436 NDFD-AQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIA----------DQKEFLIEVKALTEIRHRNIVKFYG 503 (708)
Q Consensus 436 ~~~~-~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~----------~~~~~~~e~~~l~~l~h~~iv~l~~ 503 (708)
++|. +.+.||+|+||.||+|.. .+++.||||.++......... ....+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 5565 456799999999999965 468999999987532211000 0124778999999999999999999
Q ss_pred EEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 039322 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHV 583 (708)
Q Consensus 504 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 583 (708)
++..++..++||||+. |+|.+++... ..+++.....++.|++.||+|||+. |++||||+|+||+++.++.++|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 9999999999999997 5999988643 3488999999999999999999998 9999999999999999999999
Q ss_pred eecccccccCC--------------CCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 039322 584 ADFGIAKFLKP--------------ESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLI 648 (708)
Q Consensus 584 ~Dfg~a~~~~~--------------~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~ 648 (708)
+|||++..... .........++..|+|||.+.+. .++.++||||+|+++|||++|+.||......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999976541 11112233467889999988764 3688999999999999999999998643211
Q ss_pred ccccc-------ccccccccc--------cCCCCCCC-CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 649 SSSSL-------NTDIALDEI--------LDPRLPPP-SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 649 ~~~~~-------~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..... ......... .....+.. ..........+.+++.+||+.+|++|||++|++.+-+
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~ 315 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence 00000 000000000 00000000 0000112345789999999999999999999998754
No 361
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.7e-33 Score=292.15 Aligned_cols=265 Identities=23% Similarity=0.313 Sum_probs=194.1
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR---- 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~---- 509 (708)
.++|++.+.||+|+||.||+|.. .+++.||||.+....... .....+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE--GFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC--CchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 36799999999999999999965 468899999986532211 22345678999999999999999999987654
Q ss_pred ----eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 510 ----HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 510 ----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
..++||||+.+ ++.+++.... ..+++.+++.++.|++.||+|||++ +++|+||+|+||+++.++.+||+|
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~d 162 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLAD 162 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECc
Confidence 35999999975 8888875432 3589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCc----cccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------c
Q 039322 586 FGIAKFLKPESSN----WTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------L 653 (708)
Q Consensus 586 fg~a~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~ 653 (708)
||++......... .....++..|+|||.+.+.. ++.++||||||+++|||++|..||.......... .
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T cd07865 163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGS 242 (310)
T ss_pred CCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9999865432211 12345678899999876643 6889999999999999999999986432110000 0
Q ss_pred ccccc------cccccCCCCCCCCc-hhH------HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 NTDIA------LDEILDPRLPPPSR-SVQ------EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ~~~~~------~~~~~~~~~~~~~~-~~~------~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..... .........+.... ... .....+.+++.+||+.||++|||++|+++|-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~ 309 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDF 309 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCC
Confidence 00000 00000000000000 000 01234678999999999999999999998754
No 362
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.7e-34 Score=298.95 Aligned_cols=262 Identities=24% Similarity=0.346 Sum_probs=200.9
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC-----e
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR-----H 510 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~-----~ 510 (708)
+|++.+.||+|++|.||+|... +++.||+|++..... .....+.+.+|+++++.++|+||+++.+++...+ .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD--DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc--cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccc
Confidence 4788899999999999999764 589999999876321 2334567899999999999999999999998775 7
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.|++|||+.+ +|.+++.... .+++..++.++.|++.||+|||+. |++||||||+||+++.++.++|+|||.+.
T Consensus 79 ~~lv~e~~~~-~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 79 VYIVTELMET-DLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred eEEEecchhh-hHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 8999999984 8998886543 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC---CccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cc------
Q 039322 591 FLKPES---SNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SL------ 653 (708)
Q Consensus 591 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~------ 653 (708)
...... .......++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......... ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 231 (330)
T cd07834 152 GVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDL 231 (330)
T ss_pred eecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHh
Confidence 765443 123345678899999999887 7899999999999999999999998643211000 00
Q ss_pred --ccccccccccCC-CCCCCC---chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 --NTDIALDEILDP-RLPPPS---RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 --~~~~~~~~~~~~-~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
............ ...... .........+.+++.+||+++|++|||+++++++-+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 291 (330)
T cd07834 232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY 291 (330)
T ss_pred hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCcc
Confidence 000000000000 000000 000112346789999999999999999999998744
No 363
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.8e-34 Score=288.26 Aligned_cols=256 Identities=21% Similarity=0.252 Sum_probs=198.5
Q ss_pred cccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCc-chhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPC-DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+|.+.+.||+|+||.||++... .+..+++|+++..... .......++..|+.++++++||||+++++++.+++..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4788899999999999999654 3445666665532111 1122344577889999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 515 YELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
+||+++++|.+++.... ....+++..++.++.|++.|++|||+. |++|+||+|+||+++. +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999886432 234689999999999999999999999 9999999999999975 569999999998765
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........++..|+|||...+..++.++|+||+|+++|+|++|..||..... ............+..
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~--- 225 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--------LSVVLRIVEGPTPSL--- 225 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHcCCCCCC---
Confidence 444434445678899999998888888999999999999999999999863221 111111112211111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......++.+++.+||+.+|++||++.|++++=+
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 259 (260)
T cd08222 226 PETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPF 259 (260)
T ss_pred cchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCC
Confidence 1233446888999999999999999999998744
No 364
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.4e-33 Score=294.14 Aligned_cols=262 Identities=26% Similarity=0.341 Sum_probs=197.3
Q ss_pred HHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee-CC
Q 039322 432 VRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH-AR 509 (708)
Q Consensus 432 ~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~~ 509 (708)
...+++|++.+.||+|+||.||+|.. .+++.||+|.+.+.... ....+.+..|++++++++||||+++.+++.. .+
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST--PVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc--cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34678899999999999999999964 47899999988653221 2335667889999999999999999999876 45
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
..++++||+ +++|.++++.. .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.+
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccc
Confidence 789999998 56899888643 378888999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cccccccccc
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLNTDIALDE 661 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~~~~~~~~ 661 (708)
..... ......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||......... ..........
T Consensus 156 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 156 RIQDP---QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred cccCC---CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 75432 2223456789999998765 56889999999999999999999998643211000 0000000000
Q ss_pred cc---------CCC--CC-CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 662 IL---------DPR--LP-PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 662 ~~---------~~~--~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
+. ... .+ +...........+.+++.+||+.+|++|||+++++.+=
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~ 289 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 00 000 00 00001111235688999999999999999999998763
No 365
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2e-33 Score=281.95 Aligned_cols=245 Identities=26% Similarity=0.325 Sum_probs=198.5
Q ss_pred eccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCC
Q 039322 444 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGS 522 (708)
Q Consensus 444 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~ 522 (708)
||+|+||.||++... +++.||+|.+..... ........+..|++++++++|+||+++++.+..++..++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI-IKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhh-cchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 699999999999654 588999999876422 122345678899999999999999999999999999999999999999
Q ss_pred HHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 039322 523 LAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEF 602 (708)
Q Consensus 523 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 602 (708)
|.+++.... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+.............
T Consensus 80 L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (250)
T cd05123 80 LFSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTF 153 (250)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCC
Confidence 999996543 489999999999999999999998 99999999999999999999999999998765433333455
Q ss_pred cccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHH
Q 039322 603 AGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIM 682 (708)
Q Consensus 603 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 682 (708)
.++..|+|||...+...+.++|+||||+++|++++|+.||..... ..............+... ...+.
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~l~ 221 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILKDPLRFPEFL----SPEAR 221 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhcCCCCCCCCC----CHHHH
Confidence 678899999999888889999999999999999999999863321 111222222222222111 33578
Q ss_pred HHHHhccCCCCCCCCCH---HHHHHHhh
Q 039322 683 EVAFSCLNESPESRPTM---KVVTQQVR 707 (708)
Q Consensus 683 ~li~~cl~~dP~~RPs~---~evl~~l~ 707 (708)
+++.+||..||++||++ +++.++-+
T Consensus 222 ~~i~~~l~~~p~~R~~~~~~~~l~~~~~ 249 (250)
T cd05123 222 DLISGLLQKDPTKRLGSGGAEEIKAHPF 249 (250)
T ss_pred HHHHHHhcCCHhhCCCcccHHHHHhCCC
Confidence 89999999999999999 78877643
No 366
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.4e-33 Score=286.96 Aligned_cols=261 Identities=24% Similarity=0.353 Sum_probs=196.5
Q ss_pred ccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~ 515 (708)
|.+.+.||+|++|.||+|... +++.||||.+...... .......+|+..+++++ |+|++++++++..++..++||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 77 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVF 77 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc---hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEE
Confidence 567889999999999999765 5788999998753221 22334557889999998 999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+ +|+|.+++.... ...+++..+..++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||.+......
T Consensus 78 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 78 EYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred ecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 999 789999886544 24589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------cc-----cccccccc
Q 039322 596 SSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS--------SL-----NTDIALDE 661 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~--------~~-----~~~~~~~~ 661 (708)
. ......++..|+|||++.. ..++.++|+||||+++|||++|+.||......... .. ........
T Consensus 153 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 153 P-PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred C-CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 2 2233567889999998754 45788999999999999999999998643211000 00 00000000
Q ss_pred ccCCCCCCCCc-----hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ILDPRLPPPSR-----SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+...+.... ........+.+++.+||+.||++|||++|++.+-+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~ 282 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence 11111110000 00111356889999999999999999999998643
No 367
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.9e-33 Score=294.04 Aligned_cols=265 Identities=22% Similarity=0.334 Sum_probs=197.6
Q ss_pred HHHHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee
Q 039322 429 DEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH 507 (708)
Q Consensus 429 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~ 507 (708)
.++....++|.+.+.||+|+||.||+|.. .+++.||+|++.... ......+.+.+|++++++++|+||+++++++..
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc--hhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 45566779999999999999999999954 578999999987532 122335668889999999999999999998864
Q ss_pred C------CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 039322 508 A------RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA 581 (708)
Q Consensus 508 ~------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 581 (708)
. ...+++++++ +++|.+++... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCE
Confidence 3 3467888876 77999887543 389999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------c
Q 039322 582 HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------L 653 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~ 653 (708)
||+|||++..... ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.......... .
T Consensus 160 kl~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (345)
T cd07877 160 KILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236 (345)
T ss_pred EEecccccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9999999875432 2233467889999998766 467889999999999999999999986422110000 0
Q ss_pred ccccccccccC----------CCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 654 NTDIALDEILD----------PRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 654 ~~~~~~~~~~~----------~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
........+.+ +..+... .........+.+++.+|++.||++||++.+++++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 00000000000 0000000 00001133578999999999999999999999874
No 368
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.5e-33 Score=294.39 Aligned_cols=257 Identities=21% Similarity=0.337 Sum_probs=192.2
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR---- 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~---- 509 (708)
..+|...+.||+|+||.||+|.. .+|+.||+|++...... ......+.+|++++++++|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS--EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc--ccchhHHHHHHHHHHhcCCCCccchhheecccccCCC
Confidence 47899999999999999999965 46899999998764321 122456788999999999999999999986542
Q ss_pred --eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 510 --HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 510 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
..++|+||+.. ++.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 92 FQDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred CceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCC
Confidence 46899999964 7777652 2478999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------ccccccc
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------LNTDIAL 659 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~~~~~~~ 659 (708)
++..... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... .......
T Consensus 163 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07879 163 LARHADA---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFV 239 (342)
T ss_pred CCcCCCC---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9875432 2223467889999998876 457889999999999999999999997432110000 0000000
Q ss_pred --------ccccC--CCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 660 --------DEILD--PRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 660 --------~~~~~--~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
..... +..+... .........+.+++.+||+.||++||+++|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 240 QKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred HHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 0000000 0001123457899999999999999999999976
No 369
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-33 Score=270.87 Aligned_cols=260 Identities=20% Similarity=0.274 Sum_probs=207.0
Q ss_pred HHHHHhccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEE
Q 039322 430 EIVRATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503 (708)
Q Consensus 430 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~ 503 (708)
++.....+++..-.+-+|.||.||+|.+. +.+.|.+|.++... ..-+...+..|..++..+.|||+..+.+
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A---S~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA---SQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc---cHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 44444566777778999999999999553 34457778776531 1223556888999999999999999999
Q ss_pred EEee-CCeeEEEEEeccCCCHHHHhc-----ccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 039322 504 FCSH-ARHSFLVYELLERGSLAAILS-----SDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 504 ~~~~-~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 577 (708)
++.+ .+..+.++.++.-|+|..|+. .....+.++..+...++.|++.|++|||++ +|||.||.++|+++++
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence 8855 467889999999999999997 344456688899999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccccccCCCCCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccc
Q 039322 578 EYEAHVADFGIAKFLKPESSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLN 654 (708)
Q Consensus 578 ~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~ 654 (708)
...+||+|=.+++...+.++.. ...-.+..||+||.+....++.++||||||+++|||+| |+.||...+.
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP------- 504 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP------- 504 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH-------
Confidence 9999999999999877765542 33345789999999999999999999999999999998 9999864332
Q ss_pred cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.+...-+.|+..-..+..+++ ++..++.-||..+|++||+++|++.-|
T Consensus 505 -fEm~~ylkdGyRlaQP~NCPD---eLf~vMacCWallpeeRPsf~Qlv~cL 552 (563)
T KOG1024|consen 505 -FEMEHYLKDGYRLAQPFNCPD---ELFTVMACCWALLPEERPSFSQLVICL 552 (563)
T ss_pred -HHHHHHHhccceecCCCCCcH---HHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 333333444443333344444 477788899999999999999998755
No 370
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.2e-33 Score=287.16 Aligned_cols=262 Identities=24% Similarity=0.334 Sum_probs=200.1
Q ss_pred ccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|+..+.||+|++|.||+|... +++.||+|.+.... ......+.+..|++++++++|+|++++++++...+..++|+|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN--EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc--ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEec
Confidence 456778999999999999665 58999999988643 122335667889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|++ ++|.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||.+.......
T Consensus 79 ~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 152 (282)
T cd07829 79 YCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPL 152 (282)
T ss_pred CcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence 998 49999997653 3489999999999999999999999 99999999999999999999999999998765443
Q ss_pred CccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------cccccc---cccc--c
Q 039322 597 SNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------LNTDIA---LDEI--L 663 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~~~~~~---~~~~--~ 663 (708)
.......++..|+|||.+.+. .++.++||||||+++||+++|+.||.......... ...... .... .
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 153 RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccc
Confidence 333344567889999988766 78899999999999999999999986432110000 000000 0000 0
Q ss_pred CCCCCC---CC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 664 DPRLPP---PS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 664 ~~~~~~---~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+...+. .. .........+.+++.+||..||++||++++++.+=+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~ 281 (282)
T cd07829 233 KPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281 (282)
T ss_pred cccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcC
Confidence 000000 00 001112446889999999999999999999998744
No 371
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.3e-33 Score=291.34 Aligned_cols=265 Identities=23% Similarity=0.296 Sum_probs=194.2
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR---- 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~---- 509 (708)
.++|++.+.||+|+||.||+|... +++.||+|.+......+ .....+.+|++++++++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD--GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC--CcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 478999999999999999999654 68899999986532211 12345678999999999999999999875433
Q ss_pred ----eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 510 ----HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 510 ----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
..++|+||+.+ ++.+.+.... ..+++.++..++.|+++||+|||+. |++|+||||+||++++++.++|+|
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 158 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIAD 158 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 46999999975 7777765432 4589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCc-----------cccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc
Q 039322 586 FGIAKFLKPESSN-----------WTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL 653 (708)
Q Consensus 586 fg~a~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~ 653 (708)
||++......... .....++..|+|||.+.+. .++.++||||+|+++|||++|+.||...........
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~ 238 (311)
T cd07866 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHL 238 (311)
T ss_pred CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999765432211 1233567889999987654 478899999999999999999999864322100000
Q ss_pred --------c-----ccccccc----ccCCCCCCCCc-hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 --------N-----TDIALDE----ILDPRLPPPSR-SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 --------~-----~~~~~~~----~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ....... ......+.... ........+.+++.+|++.||++|||+.|++++-+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~ 310 (311)
T cd07866 239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310 (311)
T ss_pred HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCC
Confidence 0 0000000 00011111000 00111246789999999999999999999998743
No 372
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4e-33 Score=292.77 Aligned_cols=262 Identities=22% Similarity=0.315 Sum_probs=196.1
Q ss_pred HHHhccccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC-
Q 039322 432 VRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR- 509 (708)
Q Consensus 432 ~~~~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~- 509 (708)
....++|++.+.||+|+||.||+|. ..+|+.||||.+.... ......+.+..|++++++++|+||+++++++..+.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 3346789999999999999999995 4578999999986532 12233456889999999999999999999987543
Q ss_pred -----eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEe
Q 039322 510 -----HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVA 584 (708)
Q Consensus 510 -----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 584 (708)
..++||||+ +++|.+++.. ..+++..+..++.|++.|++|||+. |++||||||+||+++.++.++|+
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~ 160 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKIL 160 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 458999998 6799988854 2489999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------cccc
Q 039322 585 DFGIAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------LNTD 656 (708)
Q Consensus 585 Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~~~~ 656 (708)
|||++...... .....++..|+|||.+.+ ..++.++|+||+|+++|++++|+.||.......... ....
T Consensus 161 dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 161 DFGLARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred ecccccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999765322 223456889999998876 457889999999999999999999987432110000 0000
Q ss_pred cccccc--------cC--CCCCCC--CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 657 IALDEI--------LD--PRLPPP--SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 657 ~~~~~~--------~~--~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.....+ .. +..... ..........+.+++.+|++.||++|||+.+++++-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~ 299 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHP 299 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 000000 00 000000 000011233578999999999999999999999763
No 373
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=244.90 Aligned_cols=261 Identities=20% Similarity=0.282 Sum_probs=199.6
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+|...++||+|.||+||+|+. .+++.||+|.++.+.. +..-.....+|+.+++.++|+|||++++....++..-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd--degvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC--CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 466677899999999999965 4688999999986432 2233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
|||.. +|..+..... ..++.+..+.++.|+.+|+.|+|++ ++.|||+||.|.++..+|+.|++|||+|+-++-+
T Consensus 81 e~cdq-dlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred HHhhH-HHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 99965 8888876543 4588899999999999999999999 9999999999999999999999999999977655
Q ss_pred CCccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHh-CCCCCCcccccccc--------cccc-----ccccc
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSS--------SLNT-----DIALD 660 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~--------~~~~-----~~~~~ 660 (708)
-.-+...+.|..|.+|.++.+.+ |+...|+||-||++.|+.. |++.|......... .... ...+.
T Consensus 155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lp 234 (292)
T KOG0662|consen 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLP 234 (292)
T ss_pred eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCC
Confidence 44556667899999999998866 7889999999999999996 55556542211100 0000 01111
Q ss_pred cccCCCCCCCCchhHHHHH----HHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 661 EILDPRLPPPSRSVQEKLI----SIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~----~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
+...-...+....+.+... .=.+++.+.+.-+|.+|.++++.+++
T Consensus 235 dyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 235 DYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 1111111122223333222 23567778888899999999999886
No 374
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=6.4e-33 Score=313.29 Aligned_cols=149 Identities=26% Similarity=0.333 Sum_probs=132.1
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|.+.+.||+|+||.||+|... +++.||||+++.... ........+..|+.+++.++|+||+++++++...+..|+
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM-INKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc-cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence 368999999999999999999664 688999999875321 222345678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
||||+.+++|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 82 VmEy~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999996543 478899999999999999999998 99999999999999999999999999875
No 375
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=287.49 Aligned_cols=249 Identities=24% Similarity=0.325 Sum_probs=207.0
Q ss_pred cceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEecc
Q 039322 441 QYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
.+++|.|.||+||-|.+ ++|+.||||++.+-. -......++.+|+.+++++.||.||.+.-.|+.++..+.|||-+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlr--Fp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLR--FPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeeccc--CCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc
Confidence 46799999999999965 579999999998732 222445789999999999999999999999999999999999997
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC---CcEEEeecccccccCCCC
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE---YEAHVADFGIAKFLKPES 596 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~a~~~~~~~ 596 (708)
|.-|.-.+.. .+.++++.....++.||..||+|||.+ +|+|+||||+|||+.+. .++||||||+|+.+.. .
T Consensus 647 GDMLEMILSs--EkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE-k 720 (888)
T KOG4236|consen 647 GDMLEMILSS--EKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE-K 720 (888)
T ss_pred chHHHHHHHh--hcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch-h
Confidence 6444444443 235688999999999999999999999 99999999999999654 5799999999998764 3
Q ss_pred CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHH
Q 039322 597 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQE 676 (708)
Q Consensus 597 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (708)
+.....+||+.|.|||++....|.+.-|+||.|+++|--++|..||... +...+.+.+..+..++..|.+
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----------EdIndQIQNAaFMyPp~PW~e 790 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----------EDINDQIQNAAFMYPPNPWSE 790 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----------cchhHHhhccccccCCCchhh
Confidence 4556789999999999999999999999999999999999999998621 222334444555555666777
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 677 KLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 677 ~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......++|...++..-.+|-|...-+.|.|
T Consensus 791 is~~AidlIn~LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 791 ISPEAIDLINNLLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred cCHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence 7777788999999999999999988877765
No 376
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.8e-33 Score=295.52 Aligned_cols=261 Identities=22% Similarity=0.323 Sum_probs=196.7
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe--
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH-- 510 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~-- 510 (708)
..++|++.+.||+|++|.||+|... +++.||+|++.... ......+.+.+|+.++++++|+|++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF--QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc--chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence 3578999999999999999999664 68899999987532 122344667889999999999999999998866554
Q ss_pred ----eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 511 ----SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 511 ----~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
.++|+||+ +++|.+++.. ..+++..++.++.|++.|++|||+. |++||||+|+||+++.++.++|+||
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccc
Confidence 89999998 5699998864 3489999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------cccccc
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------LNTDIA 658 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~~~~~~ 658 (708)
|++...... .....++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||.......... ......
T Consensus 163 g~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 163 GLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEEL 239 (343)
T ss_pred ccccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Confidence 999865432 233457889999998765 357889999999999999999999986432110000 000000
Q ss_pred c--------ccccCC---CCCCCC-chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 L--------DEILDP---RLPPPS-RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~--------~~~~~~---~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ..++.. ...... .........+.+++.+|++.||++|||+.|++++-+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~ 300 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPY 300 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCC
Confidence 0 000000 000000 000112456889999999999999999999998743
No 377
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.3e-33 Score=293.48 Aligned_cols=259 Identities=21% Similarity=0.285 Sum_probs=190.9
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC------
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA------ 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~------ 508 (708)
.+|.+.+.||+|+||.||+|.. .+|+.||+|.+.... ....+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~----~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC----CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 6899999999999999999965 468899999986532 23456788899999999999999999776543
Q ss_pred --------CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CC
Q 039322 509 --------RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL-EY 579 (708)
Q Consensus 509 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~ 579 (708)
...++|+||+. ++|.+++... .+++..++.++.|++.||+|||+. |++||||||+||+++. ++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 35789999997 4898888542 378999999999999999999999 9999999999999974 56
Q ss_pred cEEEeecccccccCCCCC---ccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc----
Q 039322 580 EAHVADFGIAKFLKPESS---NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS---- 651 (708)
Q Consensus 580 ~~kl~Dfg~a~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~---- 651 (708)
.+|++|||.+........ ......++..|+|||.+.. ..++.++|||||||++|+|++|+.||.........
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 789999999976532211 1123457889999997654 45788999999999999999999999643211000
Q ss_pred ---ccccc----c---cc-cccc-CCCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 652 ---SLNTD----I---AL-DEIL-DPRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 652 ---~~~~~----~---~~-~~~~-~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
..... . .. .... .......+ ........++.+++.+||+.||++|||++|++++=
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~ 301 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHP 301 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCC
Confidence 00000 0 00 0000 00000000 00011234577899999999999999999999764
No 378
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-34 Score=276.18 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=202.6
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~ 512 (708)
..+|.+..+||+|+||.|.+|.- .+.+.||||++++++..++ .+.+.-+.|-++|.-. +-|.++.+..+|..-+.+|
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQd-DDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQD-DDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeec-CcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 46899999999999999999954 4567899999998654332 3344556677777655 5789999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
.||||+.||+|.-.++..+ ++.++.+..+|..||-||-|||++ ||++||||.+|||++.+|++||+|||++..-
T Consensus 427 FVMEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred eEEEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccc
Confidence 9999999999988886544 377788999999999999999999 9999999999999999999999999999854
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
--++.......||+.|+|||.+...+|+.++|.||||+++|||+.|+.||+. ...++....+++.....+..
T Consensus 501 i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG--------eDE~elF~aI~ehnvsyPKs 572 (683)
T KOG0696|consen 501 IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG--------EDEDELFQAIMEHNVSYPKS 572 (683)
T ss_pred ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC--------CCHHHHHHHHHHccCcCccc
Confidence 4455556678999999999999999999999999999999999999999984 33456666777766554433
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCC
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRP 697 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RP 697 (708)
. +.+.+.+.+..+.+.|.+|.
T Consensus 573 l----SkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 573 L----SKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred c----cHHHHHHHHHHhhcCCcccc
Confidence 2 23356777788999999996
No 379
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-34 Score=311.16 Aligned_cols=258 Identities=23% Similarity=0.258 Sum_probs=206.9
Q ss_pred HHHHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 431 IVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 431 ~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
+.-..++|.+.++||+|+||.|..++++ +++.||+|++.+... -...+...|..|-.+|..-+.+-|+.+...|.+++
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eM-lKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEM-LKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHH-hhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 3334579999999999999999999764 588999999986221 11245678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
++|+|||||+||+|...+++.. +++++.++.++..|+-||+-+|+. |+|||||||+|||+|..|++||+|||.+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhH
Confidence 9999999999999999998765 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-ccccccccccccCcccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 039322 590 KFLKPESS-NWTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEIL 663 (708)
Q Consensus 590 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 663 (708)
-.+..++. .....+|||.|.+||++.. +.|++..|.||+||++|||+.|..||..... -.....++
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl--------veTY~KIm 294 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL--------VETYGKIM 294 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH--------HHHHHHHh
Confidence 88875554 3456789999999999852 5688999999999999999999999974322 12222222
Q ss_pred CC--CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHHh
Q 039322 664 DP--RLPPPSRSVQEKLISIMEVAFSCLNESPESRPT---MKVVTQQV 706 (708)
Q Consensus 664 ~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~l 706 (708)
+- .+..| .....+....+||.+.+. +|+.|-. ++++..|-
T Consensus 295 ~hk~~l~FP--~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 295 NHKESLSFP--DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred chhhhcCCC--cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 22 22222 111234456677766665 6788876 88887764
No 380
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.1e-32 Score=288.36 Aligned_cols=261 Identities=24% Similarity=0.307 Sum_probs=191.1
Q ss_pred cccccceeccccCccEEEEEeC-C--CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeC----
Q 039322 437 DFDAQYCIGNGGHGSVYRAELP-S--GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHA---- 508 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~---- 508 (708)
+|++.+.||+|+||.||++... . +..||+|.+..... .....+.+.+|+++++++ +||||+++++.+...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 78 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS--KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNF 78 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc--cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccC
Confidence 4778889999999999999654 3 77899999875321 122355678899999999 599999999876432
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
...++++||+. ++|.+++... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||.
T Consensus 79 ~~~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 79 NELYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred CcEEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 45788899886 5899988643 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC----ccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------ccccc
Q 039322 589 AKFLKPESS----NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-------SLNTD 656 (708)
Q Consensus 589 a~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-------~~~~~ 656 (708)
+........ ......|+..|+|||...+ ..++.++||||+|+++|+|++|+.||......... .....
T Consensus 152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 986543211 1233468899999998765 45889999999999999999999998743210000 00000
Q ss_pred cccccccC-----------CCCCCC-CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 657 IALDEILD-----------PRLPPP-SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 657 ~~~~~~~~-----------~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.....+.. ...... ..........+.+++.+|++.||++|||+.|++++=
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~ 293 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHP 293 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 00000000 000000 000011134688999999999999999999998763
No 381
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-35 Score=269.41 Aligned_cols=255 Identities=26% Similarity=0.361 Sum_probs=196.4
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHH-HHhccCCceeeEEEEEeeCCeeEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKA-LTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+.+-...||.|+||+|++-.+ +.|+..|||+++... ...+++++..|.+. ++.-++|+||+++|.+..++..|+.
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n---~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiC 141 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN---IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWIC 141 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc---chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeee
Confidence 444556799999999999955 579999999998743 24567889999886 5555799999999999999999999
Q ss_pred EEeccCCCHHHHhcccc--cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 515 YELLERGSLAAILSSDT--AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
||.|.- +++.+.+.-. ....+++.-+-+|+...++||.||.+.. .|+|||+||+|||++..|.+||||||.+...
T Consensus 142 MELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 142 MELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred HHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhH
Confidence 999965 7766553211 2345788888899999999999999886 8999999999999999999999999998765
Q ss_pred CCCCCccccccccccccCccccccC--CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC--
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTM--KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP-- 668 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 668 (708)
.. +...+.-+|-..|||||.+... .++.+|||||||+.+||+.||+.||..-. ...+.+..+..+..+
T Consensus 219 v~-SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-------svfeql~~Vv~gdpp~l 290 (361)
T KOG1006|consen 219 VD-SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-------SVFEQLCQVVIGDPPIL 290 (361)
T ss_pred HH-HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-------HHHHHHHHHHcCCCCee
Confidence 42 2334555778899999988643 48889999999999999999999986211 011222222222222
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
............+..+|.-|+-+|-.+||.+.++.++
T Consensus 291 ~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 291 LFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 2222333455678888999999999999999998753
No 382
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-33 Score=293.81 Aligned_cols=257 Identities=23% Similarity=0.411 Sum_probs=212.2
Q ss_pred HHHHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEe
Q 039322 429 DEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCS 506 (708)
Q Consensus 429 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~ 506 (708)
+.....+..|++..+||+|.+|.||+++. ++|+.+|+|+..... ...+++..|.++++.. .|||++.++|++.
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-----d~deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-----DEEEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-----cccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 33344567889999999999999999954 568889999987643 2345566788888877 5999999999985
Q ss_pred e-----CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 039322 507 H-----ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA 581 (708)
Q Consensus 507 ~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 581 (708)
. ++.+|+|||||.+||..|+++.-. +.++.|+.+..|++.++.|+.+||.. .++|||+|-.|||++.++.|
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 3 568999999999999999998766 67799999999999999999999999 89999999999999999999
Q ss_pred EEeecccccccCCCCCccccccccccccCccccccC-----CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccc
Q 039322 582 HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM-----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD 656 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~ 656 (708)
|++|||.+...+.........+||+.|||||++... .|+.++|+||||++..||.-|.+|+-.+-
T Consensus 163 KLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH---------- 232 (953)
T KOG0587|consen 163 KLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH---------- 232 (953)
T ss_pred EEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc----------
Confidence 999999999887666666778999999999998643 46778999999999999999999975322
Q ss_pred cccccccC--CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 657 IALDEILD--PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 657 ~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.++.++. +..++....+..+..++-++|..|+.+|.++||++.++++|
T Consensus 233 -PmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 233 -PMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred -hhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 2222222 12223333456777889999999999999999999999876
No 383
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3e-32 Score=270.75 Aligned_cols=225 Identities=20% Similarity=0.171 Sum_probs=178.0
Q ss_pred ccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCCHHH
Q 039322 447 GGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAA 525 (708)
Q Consensus 447 G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~ 525 (708)
|.+|.||++.. .+++.||+|+++... .+..|...+....||||+++++++...+..++||||+++|+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 88999999955 578899999987531 22334455555679999999999999999999999999999999
Q ss_pred HhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcccccccc
Q 039322 526 ILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGT 605 (708)
Q Consensus 526 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 605 (708)
++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+...... .....++
T Consensus 75 ~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~ 145 (237)
T cd05576 75 HISKFL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVE 145 (237)
T ss_pred HHHHhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcC
Confidence 986543 389999999999999999999998 9999999999999999999999999988655432 1223456
Q ss_pred ccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHH
Q 039322 606 YGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVA 685 (708)
Q Consensus 606 ~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 685 (708)
..|+|||...+..++.++||||+|+++|||++|+.|++...... ........+. .....+.+++
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------~~~~~~~~~~------~~~~~~~~li 209 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------NTHTTLNIPE------WVSEEARSLL 209 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------ccccccCCcc------cCCHHHHHHH
Confidence 78999999988888999999999999999999998875321100 0000001111 1223578899
Q ss_pred HhccCCCCCCCCCH-----HHHHHH
Q 039322 686 FSCLNESPESRPTM-----KVVTQQ 705 (708)
Q Consensus 686 ~~cl~~dP~~RPs~-----~evl~~ 705 (708)
.+|++.||++||++ +|+++|
T Consensus 210 ~~~l~~dp~~R~~~~~~~~~~~~~h 234 (237)
T cd05576 210 QQLLQFNPTERLGAGVAGVEDIKSH 234 (237)
T ss_pred HHHccCCHHHhcCCCccchHHHHcC
Confidence 99999999999996 777765
No 384
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=272.89 Aligned_cols=267 Identities=20% Similarity=0.272 Sum_probs=202.6
Q ss_pred chHHHHHHHhccccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-C-C----ce
Q 039322 426 LVYDEIVRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-H-R----NI 498 (708)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-~----~i 498 (708)
+.|..-...+++|.+...+|+|.||.|-... ...+..||||+++. -..-.+..+-|+++++++. + | -+
T Consensus 79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~-----V~kYreAa~iEi~vLqki~~~DP~g~~rc 153 (415)
T KOG0671|consen 79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN-----VDKYREAALIEIEVLQKINESDPNGKFRC 153 (415)
T ss_pred EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHH-----HHHHhhHHHHHHHHHHHHHhcCCCCceEE
Confidence 3333333346899999999999999999994 44578999999975 2234567788999999994 2 2 37
Q ss_pred eeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-
Q 039322 499 VKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL- 577 (708)
Q Consensus 499 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~- 577 (708)
+.+.+||...++.|+|+|.+ |-|+.+++..+.. .+++...+..+++|++++++|||+. +++|-||||+||++.+
T Consensus 154 v~m~~wFdyrghiCivfell-G~S~~dFlk~N~y-~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss 228 (415)
T KOG0671|consen 154 VQMRDWFDYRGHICIVFELL-GLSTFDFLKENNY-IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSS 228 (415)
T ss_pred EeeehhhhccCceEEEEecc-ChhHHHHhccCCc-cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEecc
Confidence 88889999999999999988 4599999987654 5589999999999999999999999 9999999999999942
Q ss_pred -------------------CCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhC
Q 039322 578 -------------------EYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKG 638 (708)
Q Consensus 578 -------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg 638 (708)
+..++++|||.|++.... ....+.|..|.|||++.+-.++.++||||+|||++|+.||
T Consensus 229 ~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG 305 (415)
T KOG0671|consen 229 EYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTG 305 (415)
T ss_pred ceEEEeccCCccceeccCCCcceEEEecCCcceeccC---cceeeeccccCCchheeccCcCCccCceeeeeEEEEeecc
Confidence 235899999999865432 2567789999999999999999999999999999999999
Q ss_pred CCCCCcccccccc-------cccc--------------ccc-----------cccccCCCCCCC--CchhHHHHHHHHHH
Q 039322 639 KHPRDFLSLISSS-------SLNT--------------DIA-----------LDEILDPRLPPP--SRSVQEKLISIMEV 684 (708)
Q Consensus 639 ~~p~~~~~~~~~~-------~~~~--------------~~~-----------~~~~~~~~~~~~--~~~~~~~~~~l~~l 684 (708)
...|...+..+.. +... ... .+.+.+...+.. ......+...+.+|
T Consensus 306 ~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDL 385 (415)
T KOG0671|consen 306 ETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDL 385 (415)
T ss_pred ceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHH
Confidence 9988643211000 0000 000 011111111000 01122344579999
Q ss_pred HHhccCCCCCCCCCHHHHHHH
Q 039322 685 AFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 685 i~~cl~~dP~~RPs~~evl~~ 705 (708)
+++|+..||.+|+|+.|+++|
T Consensus 386 l~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 386 LRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHHccCccccccHHHHhcC
Confidence 999999999999999999986
No 385
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.7e-35 Score=298.82 Aligned_cols=349 Identities=25% Similarity=0.302 Sum_probs=282.0
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCcc-CCCCccccCCCCccEEe
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFT-SYLPHNVCRGGALQYFG 79 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~~l~~L~~L~ 79 (708)
|+++++|-|...++. ..|+.++.+.+|+.|.+++|++..+.-.....|.|+.+.+..|++. +-+|+.+..+..|+.||
T Consensus 31 Mt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lD 109 (1255)
T KOG0444|consen 31 MTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILD 109 (1255)
T ss_pred hhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhhHHHhhhccccccCCCCchhcccccceeee
Confidence 567788888888887 5788888888899999999988754444445588889999988887 44888888999999999
Q ss_pred ccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccc
Q 039322 80 VSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITG 159 (708)
Q Consensus 80 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 159 (708)
||+|++. ..|..+..-+++-.|+||+|+|..|+...|-++..|-.||||+|++... |.....+.+|++|.|++|.+..
T Consensus 110 LShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~L-PPQ~RRL~~LqtL~Ls~NPL~h 187 (1255)
T KOG0444|consen 110 LSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEML-PPQIRRLSMLQTLKLSNNPLNH 187 (1255)
T ss_pred cchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhc-CHHHHHHhhhhhhhcCCChhhH
Confidence 9999998 7888888889999999999999988888889999999999999999744 4566788889999999998875
Q ss_pred cCCccccCCCCCCEEeccccccc-ccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCC
Q 039322 160 GIPREIGNSSQLQALDLSLNHIV-GEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLG 238 (708)
Q Consensus 160 ~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~ 238 (708)
.--..+-.+++|++|.+++.+-+ .-+|.++..+.+|..++|+.|.+. ..|+.+..+++|+.|+||+|+|+ .......
T Consensus 188 fQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~ 265 (1255)
T KOG0444|consen 188 FQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEG 265 (1255)
T ss_pred HHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHH
Confidence 54455666777888888887655 356777888888888888888888 88888888888888888888888 4444566
Q ss_pred ccccceeecccCcccccCCChhhhhhcccchhhcccccCCC-CCchhhcCcccCCceecccccccCCCCCcccccccccE
Q 039322 239 NLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGG-EIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISV 317 (708)
Q Consensus 239 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~-~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 317 (708)
.+.+|+.|+||+|+++ ..|++++++++|+.|++.+|+++- -+|..++.+.+|+.+..++|.+. .+|..+.++..|+.
T Consensus 266 ~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~k 343 (1255)
T KOG0444|consen 266 EWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQK 343 (1255)
T ss_pred HHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHH
Confidence 6778888888888888 788888888888888888888764 45777788888888888888887 88888888888888
Q ss_pred EecCCCcCCCCCCCccccccCcccccccccCcCCCCCCC
Q 039322 318 IDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGGVKGM 356 (708)
Q Consensus 318 l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~~ 356 (708)
|.|+.|++...+.....++.+.++.+..||-.--+|+..
T Consensus 344 L~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLVMPPKP~ 382 (1255)
T KOG0444|consen 344 LKLDHNRLITLPEAIHLLPDLKVLDLRENPNLVMPPKPN 382 (1255)
T ss_pred hcccccceeechhhhhhcCCcceeeccCCcCccCCCCcc
Confidence 888888888777766777778888888888776665543
No 386
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-33 Score=286.35 Aligned_cols=242 Identities=24% Similarity=0.281 Sum_probs=193.9
Q ss_pred hccccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~ 512 (708)
+.+|.+...+|.|+|+.|-.+. ..+++..++|.+.+.. ..-.+|+.++... +||||+++.+.+.++.+.|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~--------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA--------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc--------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 5678888889999999998884 4578889999998641 1223466665555 6999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee-CCCCcEEEeecccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL-DLEYEAHVADFGIAKF 591 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill-~~~~~~kl~Dfg~a~~ 591 (708)
+|||.+.|+-+.+.+.... ....++..|+.+|+.|+.|||++ ||||||+||+|||+ ++.++++|+|||.++.
T Consensus 393 ~v~e~l~g~ell~ri~~~~----~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKP----EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred eeehhccccHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 9999999997777765433 23377788999999999999999 99999999999999 5889999999999987
Q ss_pred cCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
..++ ....+-|..|.|||+.....+++++|+||||+++|+|++|+.||...... .+....+..+.+.
T Consensus 466 ~~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s--- 532 (612)
T KOG0603|consen 466 LERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFS--- 532 (612)
T ss_pred Cchh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccc---
Confidence 6544 33345688999999999999999999999999999999999998743221 2222233333222
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+....+|+.+|++.||.+||+|.++..|-+
T Consensus 533 ---~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w 565 (612)
T KOG0603|consen 533 ---ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPW 565 (612)
T ss_pred ---cccCHHHHHHHHHhccCChhhCcChhhhccCcc
Confidence 233345678888999999999999999987754
No 387
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-33 Score=262.37 Aligned_cols=252 Identities=24% Similarity=0.332 Sum_probs=205.3
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~ 512 (708)
..+|+..++||+|+|+.|..++++ +.+.||+|++++....+ .++..-.+.|..+..+. +||.+|-+..+|..+...+
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd-dedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND-DEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCC-cccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 378999999999999999999764 57789999998743322 23445566777777766 6999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
.|.||++||+|.-+++.. ++++++.++.+...|.-||.|||+. ||++||+|..|||++..|++|+.|+|+...-
T Consensus 328 fvieyv~ggdlmfhmqrq---rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEEecCcceeeehhhh---hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence 999999999998877654 3589999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
-.++......+||+.|.|||.+.+..|...+|.|++|++++||+.|+.||+..+.........+-.+..++...+..+..
T Consensus 402 l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprs 481 (593)
T KOG0695|consen 402 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRS 481 (593)
T ss_pred CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccce
Confidence 55566667789999999999999999999999999999999999999999976643333333333444455554444322
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCC
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRP 697 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RP 697 (708)
.. .....+++.-+++||++|.
T Consensus 482 ls----vkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 482 LS----VKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ee----hhhHHHHHHhhcCCcHHhc
Confidence 21 1234566788999999986
No 388
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7.9e-33 Score=271.28 Aligned_cols=257 Identities=27% Similarity=0.391 Sum_probs=195.2
Q ss_pred ccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHh-----HHHHHHHHHHHHhccCCceeeEEEEEee-C
Q 039322 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIAD-----QKEFLIEVKALTEIRHRNIVKFYGFCSH-A 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~ 508 (708)
++|-..+.||+|+|+.||+| +....+.||||+-... ..+..+ .+...+|.++.+.+.||.||++|+||.- .
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlN--K~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLN--KNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhc--cchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 56778889999999999999 5566888999986532 223222 2457889999999999999999999965 4
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---CCcEEEee
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL---EYEAHVAD 585 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~D 585 (708)
+.+|-|+|||+|-+|+.||+.++. +++++.+.|+.||+.||.||.+.. |+|+|-||||.|||+-. -|.+||.|
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhkl---mSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHKL---MSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhhh---hhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeee
Confidence 678999999999999999987654 789999999999999999999874 58999999999999954 47899999
Q ss_pred cccccccCCCCCc-------cccccccccccCccccccC----CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc
Q 039322 586 FGIAKFLKPESSN-------WTEFAGTYGYVAPELAYTM----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN 654 (708)
Q Consensus 586 fg~a~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~ 654 (708)
||++..++.+.+. .....||.+|+|||.+.-+ +.+.|+||||.|+++|+++.|+.||......... ..
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI-Lq 695 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI-LQ 695 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH-Hh
Confidence 9999988765543 2346799999999987543 4678999999999999999999999743221000 00
Q ss_pred cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 039322 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704 (708)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 704 (708)
.+..+.+ ..-.+++.+ ....+...+|++|+++.-++|....++..
T Consensus 696 eNTIlkA-tEVqFP~KP----vVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 696 ENTILKA-TEVQFPPKP----VVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hhchhcc-eeccCCCCC----ccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 0111111 111122221 11223567788999999999988877654
No 389
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.4e-33 Score=255.12 Aligned_cols=265 Identities=23% Similarity=0.332 Sum_probs=194.8
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee------
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH------ 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------ 507 (708)
.+.|+...+||+|.||.||+|+. +.|+.||+|++.-..+... -.....+|++++..++|+|++.+++.|..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeG--fpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEG--FPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccC--CcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 36677788999999999999965 4577889977643211111 13456789999999999999999988743
Q ss_pred --CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 508 --ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 508 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
....|+||++|+. +|...+.... .+++..++.++..++..||.|+|.. .|+|||+|+.|+|++.+|.+||+|
T Consensus 94 r~r~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred cccceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 2357999999987 8998886543 5688999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCC----CCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccc------------
Q 039322 586 FGIAKFLKPE----SSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLI------------ 648 (708)
Q Consensus 586 fg~a~~~~~~----~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~------------ 648 (708)
||+++.+... ...++..+.|..|.+||.+.+ ..++++.|||..||++.||+|+.+-+......
T Consensus 168 FGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs 247 (376)
T KOG0669|consen 168 FGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGS 247 (376)
T ss_pred cccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhcc
Confidence 9999755322 223566788999999998776 45899999999999999999999887642211
Q ss_pred ----cccccccccccccccCCCCCCCCc-hhHHHH------HHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 649 ----SSSSLNTDIALDEILDPRLPPPSR-SVQEKL------ISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 649 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+..........++--+.++.... ...+.. ..-.+|+..++..||.+|++++++++|-.
T Consensus 248 ~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 248 ITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred CCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 000111111111111111111000 001111 13457788999999999999999998754
No 390
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-33 Score=276.34 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=206.2
Q ss_pred hccccccceeccccCccEEEEEeCCCc-EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
..+++....||-|+||.|-.+..++.+ .+|+|.+++. ...+....+.+..|-++|.+.+.|.||++|--|.+.+..|+
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~-hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKK-HIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHh-hccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 356667778999999999999775443 3899998873 33445667788899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
.||-|-||.++..+..++ .++......++..+.+|++|||++ |||+|||||+|.+++.+|-+||.|||+|..+.
T Consensus 498 LmEaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 498 LMEACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred hHHhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 999999999999997655 488889999999999999999999 99999999999999999999999999999887
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.+ ......+||+.|.|||.+.+...+.++|.||||+++|||++|.+||.....+ ......++-+-.-.++.
T Consensus 572 ~g-~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm----ktYn~ILkGid~i~~Pr---- 642 (732)
T KOG0614|consen 572 SG-RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM----KTYNLILKGIDKIEFPR---- 642 (732)
T ss_pred cC-CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH----HHHHHHHhhhhhhhccc----
Confidence 54 4446689999999999999999999999999999999999999999854321 11111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPT-----MKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~ 707 (708)
.....-.++|++.+..+|.+|.- ..|+.+|-|
T Consensus 643 --~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 643 --RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred --ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 11223567888999999999985 667777665
No 391
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=7.4e-31 Score=261.83 Aligned_cols=241 Identities=29% Similarity=0.421 Sum_probs=193.0
Q ss_pred cCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCCHHHH
Q 039322 448 GHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAI 526 (708)
Q Consensus 448 ~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 526 (708)
+||.||+|... +|+.+|+|++...... ...+.+.+|++.+++++|+|++++++++......++++||+++++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIK---KKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccc---cHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 57999999765 4899999998764221 1167899999999999999999999999999999999999999999999
Q ss_pred hcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccc
Q 039322 527 LSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTY 606 (708)
Q Consensus 527 l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 606 (708)
+..... +++..++.++.+++.++++||+. +++|+||+|+||+++.++.++++|||.+....... ......++.
T Consensus 78 ~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~ 150 (244)
T smart00220 78 LKKRGR---LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTP 150 (244)
T ss_pred HHhccC---CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCc
Confidence 865432 78999999999999999999999 99999999999999999999999999998765432 334456788
Q ss_pred cccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHH
Q 039322 607 GYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAF 686 (708)
Q Consensus 607 ~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 686 (708)
.|+|||...+..++.++||||+|+++|++++|..||+... ......+.......... .........+.+++.
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~ 222 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-------QLLELFKKIGKPKPPFP-PPEWKISPEAKDLIR 222 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------cHHHHHHHHhccCCCCc-cccccCCHHHHHHHH
Confidence 9999999988888999999999999999999999986321 11111111111111111 110002346888999
Q ss_pred hccCCCCCCCCCHHHHHHHh
Q 039322 687 SCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 687 ~cl~~dP~~RPs~~evl~~l 706 (708)
+||..+|++||++.+++++=
T Consensus 223 ~~l~~~p~~Rp~~~~~~~~~ 242 (244)
T smart00220 223 KLLVKDPEKRLTAEEALQHP 242 (244)
T ss_pred HHccCCchhccCHHHHhhCC
Confidence 99999999999999999863
No 392
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=9.1e-34 Score=288.73 Aligned_cols=323 Identities=26% Similarity=0.362 Sum_probs=284.4
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeee--CCCCCCCCCcccccccCCCccCCCCccccCCCCccEE
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGF--IPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYF 78 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~--~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L 78 (708)
+.+|++|.+++|+++. .-+.++.++.|+.+.+.+|+++.. ++..|....|+.|+||+|.+.. .|..+..-.++..|
T Consensus 54 lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~E-vP~~LE~AKn~iVL 131 (1255)
T KOG0444|consen 54 LQKLEHLSMAHNQLIS-VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLRE-VPTNLEYAKNSIVL 131 (1255)
T ss_pred HhhhhhhhhhhhhhHh-hhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhh-cchhhhhhcCcEEE
Confidence 3579999999999995 556689999999999999988744 4455566889999999999988 88999988999999
Q ss_pred eccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCccc
Q 039322 79 GVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNIT 158 (708)
Q Consensus 79 ~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~ 158 (708)
+||+|+|..+....|.++..|-.||||+|++..+ |.....+.+|++|+|++|.+....-..+..+++|+.|.+++.+=+
T Consensus 132 NLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~L-PPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT 210 (1255)
T KOG0444|consen 132 NLSYNNIETIPNSLFINLTDLLFLDLSNNRLEML-PPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT 210 (1255)
T ss_pred EcccCccccCCchHHHhhHhHhhhccccchhhhc-CHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch
Confidence 9999999955556678999999999999999955 456788999999999999986555556667788899999986543
Q ss_pred -ccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCC
Q 039322 159 -GGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENL 237 (708)
Q Consensus 159 -~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~ 237 (708)
..+|..+..+.+|..+|||.|.+. ..|+++.++++|+.|+|++|+|+ .+......-.+|++|+||+|+++ ..|+.+
T Consensus 211 l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~av 287 (1255)
T KOG0444|consen 211 LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAV 287 (1255)
T ss_pred hhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHH
Confidence 467889999999999999999999 88999999999999999999999 55545555678999999999999 899999
Q ss_pred CccccceeecccCcccccC-CChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCccccccccc
Q 039322 238 GNLLKLHYLGLSNNQFVLE-LPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGIS 316 (708)
Q Consensus 238 ~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 316 (708)
+++++|+.|.+.+|+++.. +|..++++.+|+.+..++|.+. .+|+.++.++.|+.|.|+.|++. .+|.++.-++.|+
T Consensus 288 cKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~ 365 (1255)
T KOG0444|consen 288 CKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLK 365 (1255)
T ss_pred hhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcc
Confidence 9999999999999999744 6888999999999999999998 99999999999999999999998 8899999999999
Q ss_pred EEecCCCcCCCCCCC
Q 039322 317 VIDISDNQLQGPVPN 331 (708)
Q Consensus 317 ~l~l~~N~l~~~~~~ 331 (708)
.||+..|+---.+|.
T Consensus 366 vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 366 VLDLRENPNLVMPPK 380 (1255)
T ss_pred eeeccCCcCccCCCC
Confidence 999999987766554
No 393
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.3e-30 Score=279.20 Aligned_cols=270 Identities=17% Similarity=0.221 Sum_probs=183.8
Q ss_pred HhccccccceeccccCccEEEEEe-----------------CCCcEEEEEEcCCCCCcchh----------HhHHHHHHH
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-----------------PSGQVVAIKKFHSPLPCDQI----------ADQKEFLIE 486 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-----------------~~~~~vavK~~~~~~~~~~~----------~~~~~~~~e 486 (708)
..++|++.++||+|+||.||+|.. ..++.||||.+......... ...+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 357899999999999999999953 23567999998642110000 011234457
Q ss_pred HHHHHhccCCce-----eeEEEEEee--------CCeeEEEEEeccCCCHHHHhcccc---------------------c
Q 039322 487 VKALTEIRHRNI-----VKFYGFCSH--------ARHSFLVYELLERGSLAAILSSDT---------------------A 532 (708)
Q Consensus 487 ~~~l~~l~h~~i-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~---------------------~ 532 (708)
+.++.+++|.++ ++++++|.. ++..++||||+++|+|.++++... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777778876554 677787753 356899999999999999986421 0
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc-cccccccccccCc
Q 039322 533 AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN-WTEFAGTYGYVAP 611 (708)
Q Consensus 533 ~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~y~aP 611 (708)
...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......... .....+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12356788999999999999999999 9999999999999999999999999999765432211 1223447899999
Q ss_pred cccccCCC----------------------CcchhHHHHHHHHHHHHhCCC-CCCccccccccccccccccc---cccCC
Q 039322 612 ELAYTMKI----------------------TEKCDVYSFGVLVLEAIKGKH-PRDFLSLISSSSLNTDIALD---EILDP 665 (708)
Q Consensus 612 E~~~~~~~----------------------~~~~DvwslG~~l~elltg~~-p~~~~~~~~~~~~~~~~~~~---~~~~~ 665 (708)
|.+..... ..+.||||+||++|+|++|.. ||.................. .+...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 98754321 124699999999999999886 66532211110000000000 11111
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCC---CCCCCHHHHHHHhhC
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESP---ESRPTMKVVTQQVRI 708 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~~l~~ 708 (708)
.... ...........+++.+++.++| .+|+|++|+++|-++
T Consensus 460 ~~~~--~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f 503 (507)
T PLN03224 460 KYDF--SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF 503 (507)
T ss_pred CCCc--ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence 1111 1122233457788899999876 689999999998653
No 394
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=5.9e-31 Score=289.66 Aligned_cols=262 Identities=20% Similarity=0.221 Sum_probs=169.4
Q ss_pred HhccccccceeccccCccEEEEEeC-C----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEE----
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-S----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGF---- 504 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~---- 504 (708)
..++|++.+.||+|+||.||+|... + +..||+|++.... ..+....| .+....+.++..++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~------~~e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG------AVEIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc------hhHHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 4578999999999999999999764 4 6899999876421 11111111 1111112222222111
Q ss_pred --EeeCCeeEEEEEeccCCCHHHHhcccccc-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Q 039322 505 --CSHARHSFLVYELLERGSLAAILSSDTAA-----------------QELGWSQRMNVIKGVADALSYLHHDCFPPIVH 565 (708)
Q Consensus 505 --~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH 565 (708)
...+...++|+||+.+++|.+++...... .......+..++.|++.||+|||++ +|+|
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiH 278 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVH 278 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 24556789999999999999998653210 0112344668999999999999999 9999
Q ss_pred ccCCCCCeeeCC-CCcEEEeecccccccCCCC-CccccccccccccCccccccC----------------------CCCc
Q 039322 566 QDISSKNLLLDL-EYEAHVADFGIAKFLKPES-SNWTEFAGTYGYVAPELAYTM----------------------KITE 621 (708)
Q Consensus 566 ~dlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~-~~~~~~~~~~~y~aPE~~~~~----------------------~~~~ 621 (708)
|||||+|||++. ++.+||+|||+|....... .......+++.|+|||.+... .++.
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~ 358 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD 358 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence 999999999986 5799999999998654322 223456788999999965322 1334
Q ss_pred chhHHHHHHHHHHHHhCCCCCCccccc-----cccccccccccccccCCCCCCCCc----hhHHHHHHHHHHHHhccCCC
Q 039322 622 KCDVYSFGVLVLEAIKGKHPRDFLSLI-----SSSSLNTDIALDEILDPRLPPPSR----SVQEKLISIMEVAFSCLNES 692 (708)
Q Consensus 622 ~~DvwslG~~l~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~d 692 (708)
++||||+||++|||+++..|++..... ...... .........+....... ..........+|+.+|+++|
T Consensus 359 k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 359 RFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYD-LVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCc-HHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 569999999999999988775521100 000000 00001111111100000 00001123458999999999
Q ss_pred CCCCCCHHHHHHHhh
Q 039322 693 PESRPTMKVVTQQVR 707 (708)
Q Consensus 693 P~~RPs~~evl~~l~ 707 (708)
|++|||++|+++|-+
T Consensus 438 P~kR~ta~e~L~Hpf 452 (566)
T PLN03225 438 GRQRISAKAALAHPY 452 (566)
T ss_pred cccCCCHHHHhCCcC
Confidence 999999999999854
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-31 Score=234.39 Aligned_cols=204 Identities=24% Similarity=0.406 Sum_probs=169.0
Q ss_pred HHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHH-HhccCCceeeEEEEEeeCCe
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKAL-TEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~l~~~~~~~~~ 510 (708)
...++..-...||+|+||.|-+.++ .+|+..|+|.++... +....++..+|+.+. +...+|.+|+++|...++..
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv---n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV---NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc---ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 3345566667799999999987754 479999999998654 345677888999974 45579999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 511 SFLVYELLERGSLAAILSSD-TAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
.++.||.|.- ||+.+-+.- ..+..+++.-+-+||..+++||.|||++. .++|||+||+|||++.+|++|+||||.+
T Consensus 120 vwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccc
Confidence 9999999965 887765432 23456889999999999999999999996 8999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccCcccccc----CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYT----MKITEKCDVYSFGVLVLEAIKGKHPRD 643 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~elltg~~p~~ 643 (708)
....+ +-..+...|-..|||||.+.. ..|+.++||||||+.+.||.+++.||+
T Consensus 197 G~L~d-SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 197 GYLVD-SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred eeehh-hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 86653 233344567789999998753 368889999999999999999999987
No 396
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=280.94 Aligned_cols=245 Identities=25% Similarity=0.407 Sum_probs=188.6
Q ss_pred ccccceeccccCcc-EEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEE
Q 039322 438 FDAQYCIGNGGHGS-VYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 438 ~~~~~~ig~G~~g~-vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
|.-.+++|.|+.|+ ||+|.. +|+.||||.+-. +-.....+|+..++.- +|||||++++.-.++...||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~-------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE-------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhh-------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44455789999986 699988 589999999754 2345677899998888 5999999999999999999999
Q ss_pred EeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---C--CcEEEeecccc
Q 039322 516 ELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL---E--YEAHVADFGIA 589 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~--~~~kl~Dfg~a 589 (708)
|.|.. +|++++.... ......-...+.+..|+++|+++||+. +||||||||.|||++. + ..++|+|||++
T Consensus 583 ELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls 658 (903)
T KOG1027|consen 583 ELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLS 658 (903)
T ss_pred hHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccc
Confidence 99965 9999998742 111112245678899999999999998 9999999999999976 3 46899999999
Q ss_pred cccCCCCCcc---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC
Q 039322 590 KFLKPESSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665 (708)
Q Consensus 590 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 665 (708)
.....+.... ....||-+|+|||++.....+.++||||+||++|+.++ |.+||.........-......+.
T Consensus 659 Kkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~----- 733 (903)
T KOG1027|consen 659 KKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLV----- 733 (903)
T ss_pred cccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCcccee-----
Confidence 9887665443 34678999999999999888889999999999999998 59999743221111000011111
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.+.+.. ++ .-.+||.+|+++||..||+|.+|+.|
T Consensus 734 ~L~~~~----d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 734 HLEPLP----DC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred eeccCc----hH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 111111 11 45688999999999999999999976
No 397
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.97 E-value=4.3e-34 Score=277.52 Aligned_cols=340 Identities=27% Similarity=0.380 Sum_probs=229.8
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
|..|.+|++++|+++ ..|.+++.+..++.|+.++|+++..++.....+++..|++++|.+.. ++++++.+..|..|+.
T Consensus 67 L~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~e-l~~~i~~~~~l~dl~~ 144 (565)
T KOG0472|consen 67 LACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELKE-LPDSIGRLLDLEDLDA 144 (565)
T ss_pred ccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhccccceee-cCchHHHHhhhhhhhc
Confidence 346778888888888 46667788888888888888887444444455888888888888877 7777888888888888
Q ss_pred cCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccc-
Q 039322 81 SENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITG- 159 (708)
Q Consensus 81 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~- 159 (708)
.+|+++ ..|..+.++.+|..|++.+|+++..+++.+. ++.|++||..+|.+. ..|..++.+.+|..|+|..|.|..
T Consensus 145 ~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~l 221 (565)
T KOG0472|consen 145 TNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFL 221 (565)
T ss_pred cccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccC
Confidence 888888 6677777788888888888887766666555 666677766666665 334455666666666666666552
Q ss_pred ---------------------cCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCC
Q 039322 160 ---------------------GIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVD 218 (708)
Q Consensus 160 ---------------------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 218 (708)
.......++++|.+|||++|+++ ..|..++-+.+|..|++++|.|+ .+|..++++ .
T Consensus 222 Pef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-h 298 (565)
T KOG0472|consen 222 PEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-H 298 (565)
T ss_pred CCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-e
Confidence 22222335566666666666666 55666666666666666666666 455566666 6
Q ss_pred CCeEeccCCccccc----------------------------------------------------------------CC
Q 039322 219 LEYLDLSANRFNNS----------------------------------------------------------------VP 234 (708)
Q Consensus 219 L~~L~l~~N~i~~~----------------------------------------------------------------~~ 234 (708)
|+.|-+.+|.+... +|
T Consensus 299 L~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VP 378 (565)
T KOG0472|consen 299 LKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVP 378 (565)
T ss_pred eeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCC
Confidence 66666666665320 00
Q ss_pred CCCCcccc---ceeecccCcccc-----------------------cCCChhhhhhcccchhhcccccCCCCCchhhcCc
Q 039322 235 ENLGNLLK---LHYLGLSNNQFV-----------------------LELPKELEKLVQLSELDASHNLFGGEIPFQICSL 288 (708)
Q Consensus 235 ~~~~~l~~---L~~L~l~~n~l~-----------------------~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~ 288 (708)
.....-.. ++..+++.|++. +.+|..++.+++|..|+|++|.+. ..|..+..+
T Consensus 379 dEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~l 457 (565)
T KOG0472|consen 379 DEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSL 457 (565)
T ss_pred HHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhh
Confidence 00000000 223333333332 135555666777777777777776 566667777
Q ss_pred ccCCceeccccccc-----------------------CCCCCcccccccccEEecCCCcCCCCCCCccccccCccccccc
Q 039322 289 KSLEKLNLSHNNLS-----------------------GSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKG 345 (708)
Q Consensus 289 ~~L~~L~l~~N~l~-----------------------~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~ 345 (708)
..|+.|+++.|++. ...+..+.+|.+|..||+.+|.++..+|..+...+++-+.++|
T Consensus 458 v~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~g 537 (565)
T KOG0472|consen 458 VRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDG 537 (565)
T ss_pred hhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecC
Confidence 77777777777664 2344457788999999999999999999999999999999999
Q ss_pred ccCc
Q 039322 346 NKGL 349 (708)
Q Consensus 346 n~~~ 349 (708)
||+.
T Consensus 538 Npfr 541 (565)
T KOG0472|consen 538 NPFR 541 (565)
T ss_pred CccC
Confidence 9975
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4e-30 Score=256.18 Aligned_cols=261 Identities=24% Similarity=0.312 Sum_probs=198.6
Q ss_pred ccccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-----C---CceeeEEEEEe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-----H---RNIVKFYGFCS 506 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~~iv~l~~~~~ 506 (708)
++|-+.++||-|.|++||++. ....+.||+|+.+.. ..-.+..+.|+++|++++ | .+||++++.|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk 152 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK 152 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence 689999999999999999994 456789999998862 344667889999999994 2 47999999996
Q ss_pred e----CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC----
Q 039322 507 H----ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE---- 578 (708)
Q Consensus 507 ~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---- 578 (708)
. +.+.|+|+|++ |.+|..++..... +.++...+++|++||..||.|||.+| ||||-||||+|||+..+
T Consensus 153 hsGpNG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~ 228 (590)
T KOG1290|consen 153 HSGPNGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDP 228 (590)
T ss_pred ecCCCCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccch
Confidence 5 45899999998 5699999976654 45899999999999999999999998 99999999999998300
Q ss_pred --------------------------------------------------------------------------------
Q 039322 579 -------------------------------------------------------------------------------- 578 (708)
Q Consensus 579 -------------------------------------------------------------------------------- 578 (708)
T Consensus 229 ~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~ 308 (590)
T KOG1290|consen 229 AKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPR 308 (590)
T ss_pred hhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 039322 579 -------------------------------------------------------------------------------- 578 (708)
Q Consensus 579 -------------------------------------------------------------------------------- 578 (708)
T Consensus 309 ~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~ 388 (590)
T KOG1290|consen 309 INGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPE 388 (590)
T ss_pred CCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCc
Confidence
Q ss_pred --CcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-----
Q 039322 579 --YEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS----- 651 (708)
Q Consensus 579 --~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~----- 651 (708)
-.|||+|||-|+.+. ..++.-+.|..|+|||++.+..|+..+||||++|++|||+||...|+..+.....
T Consensus 389 ~di~vKIaDlGNACW~~---khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDH 465 (590)
T KOG1290|consen 389 CDIRVKIADLGNACWVH---KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDH 465 (590)
T ss_pred cceeEEEeeccchhhhh---hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHH
Confidence 015666666666542 2345556788999999999999999999999999999999999999743221100
Q ss_pred ------------------------ccccccccccccCCCC-------CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHH
Q 039322 652 ------------------------SLNTDIALDEILDPRL-------PPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700 (708)
Q Consensus 652 ------------------------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 700 (708)
..+....++.+..-++ ........+...++.+++.-|++.+|++||||.
T Consensus 466 iA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~ 545 (590)
T KOG1290|consen 466 IALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAA 545 (590)
T ss_pred HHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHH
Confidence 0000001111111000 001123345667899999999999999999999
Q ss_pred HHHHHhhC
Q 039322 701 VVTQQVRI 708 (708)
Q Consensus 701 evl~~l~~ 708 (708)
+.++|-|+
T Consensus 546 ~cl~hPwL 553 (590)
T KOG1290|consen 546 QCLKHPWL 553 (590)
T ss_pred HHhcCccc
Confidence 99988653
No 399
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.2e-30 Score=235.33 Aligned_cols=254 Identities=20% Similarity=0.296 Sum_probs=194.1
Q ss_pred hccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeC--Ce
Q 039322 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHA--RH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~--~~ 510 (708)
.++|++.+.+|+|.|+.||.| ...+.+.++||+++. ...+.+.+|+.+++.+. ||||+.+++...++ ..
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 468999999999999999999 456788999999875 45778999999999997 99999999999775 46
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEeecccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVADFGIA 589 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~a 589 (708)
+.+|+||+.+.+..... +.++...+..+..++..||.|+|+. ||+|||+||.|++++.. ..++|+|+|+|
T Consensus 110 paLiFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred chhHhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchH
Confidence 78999999998777665 3377788999999999999999999 99999999999999875 57999999999
Q ss_pred cccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-----------------
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS----------------- 651 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~----------------- 651 (708)
.++.+.... ...+.+..|..||.+.. ..++..-|+|||||++..|+..+.||=........
T Consensus 181 EFYHp~~eY-nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 181 EFYHPGKEY-NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred hhcCCCcee-eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 999866443 44566778899998765 45888999999999999999999998432111000
Q ss_pred ---ccccccccccccCCCCCCCCc------hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 652 ---SLNTDIALDEILDPRLPPPSR------SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 652 ---~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
...-+.....++......+.. ...-...+..+++.+.+.+|-.+|||++|...|
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 000111111111111111100 000011345677889999999999999998876
No 400
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.4e-30 Score=263.09 Aligned_cols=210 Identities=22% Similarity=0.323 Sum_probs=175.1
Q ss_pred HHHHHHHh---ccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEE
Q 039322 428 YDEIVRAT---NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503 (708)
Q Consensus 428 ~~~~~~~~---~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~ 503 (708)
|..+.++. .-|...+.||-|+||.|.++ +..+...||+|.+++.. .-........+.|-.||..-..+-||++|.
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaD-Vl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKAD-VLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHH-HHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 44444443 35778888999999999999 45556789999998731 112233456788999999999999999999
Q ss_pred EEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 039322 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHV 583 (708)
Q Consensus 504 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 583 (708)
.|.+++.+|+||||++||++..+|.+.+- +.+...+.++..++.|+++.|+. |+|||||||+|||+|.+|++||
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLIrmgI---FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKL 770 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLIRMGI---FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKL 770 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceee
Confidence 99999999999999999999999976553 77888889999999999999999 9999999999999999999999
Q ss_pred eecccccccC---------CCCCc---------------------------------cccccccccccCccccccCCCCc
Q 039322 584 ADFGIAKFLK---------PESSN---------------------------------WTEFAGTYGYVAPELAYTMKITE 621 (708)
Q Consensus 584 ~Dfg~a~~~~---------~~~~~---------------------------------~~~~~~~~~y~aPE~~~~~~~~~ 621 (708)
.|||++..+. .++.. ....+||+.|+|||++....++.
T Consensus 771 TDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q 850 (1034)
T KOG0608|consen 771 TDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQ 850 (1034)
T ss_pred eeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccc
Confidence 9999986432 11000 01246899999999999999999
Q ss_pred chhHHHHHHHHHHHHhCCCCCCc
Q 039322 622 KCDVYSFGVLVLEAIKGKHPRDF 644 (708)
Q Consensus 622 ~~DvwslG~~l~elltg~~p~~~ 644 (708)
..|.||.|++||||+.|+.||-.
T Consensus 851 ~cdwws~gvil~em~~g~~pf~~ 873 (1034)
T KOG0608|consen 851 LCDWWSVGVILYEMLVGQPPFLA 873 (1034)
T ss_pred cchhhHhhHHHHHHhhCCCCccC
Confidence 99999999999999999999964
No 401
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=4.8e-28 Score=235.85 Aligned_cols=212 Identities=33% Similarity=0.577 Sum_probs=184.3
Q ss_pred eccccCccEEEEEeCC-CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCC
Q 039322 444 IGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGS 522 (708)
Q Consensus 444 ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~ 522 (708)
||+|.+|.||++.... ++.+++|++....... ..+.+.+|++.++.++|++++++++++......++++|++.+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 6899999999997754 8999999988632111 35679999999999999999999999999999999999999999
Q ss_pred HHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEeecccccccCCCCCcccc
Q 039322 523 LAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL-EYEAHVADFGIAKFLKPESSNWTE 601 (708)
Q Consensus 523 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~ 601 (708)
|.+++.... ..+++..++.++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+............
T Consensus 78 l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 152 (215)
T cd00180 78 LKDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT 152 (215)
T ss_pred HHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhc
Confidence 999987542 3478999999999999999999999 9999999999999999 899999999999866544322344
Q ss_pred ccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHH
Q 039322 602 FAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLIS 680 (708)
Q Consensus 602 ~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (708)
..+...|++||..... ..+.++|+|++|++++++ ..
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~ 189 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PE 189 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HH
Confidence 5678899999998877 788899999999999998 35
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 681 IMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 681 l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
+.+++.+|++.+|++||++.++++++
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 88999999999999999999999864
No 402
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=5.5e-30 Score=256.31 Aligned_cols=276 Identities=21% Similarity=0.210 Sum_probs=211.5
Q ss_pred cccCCCchHHHHHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc----
Q 039322 420 LNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR---- 494 (708)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---- 494 (708)
.+.++-+.+.-.+....+|.+....|+|-|++|.+|.. .-|..||||+++.. ..-.+.=+.|+++|++|+
T Consensus 416 dDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-----E~M~KtGl~EleiLkKL~~AD~ 490 (752)
T KOG0670|consen 416 DDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-----EVMHKTGLKELEILKKLNDADP 490 (752)
T ss_pred ccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-----hHHhhhhhHHHHHHHHhhccCc
Confidence 34445555554555678999999999999999999954 45789999999863 233455678999999995
Q ss_pred --CCceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 039322 495 --HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572 (708)
Q Consensus 495 --h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 572 (708)
--|.++++-.|.+.+++|||+|.+.. +|.+.+++.+....+....+..++.|+.-||..|... ||+|.||||.|
T Consensus 491 Edk~Hclrl~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDN 566 (752)
T KOG0670|consen 491 EDKFHCLRLFRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDN 566 (752)
T ss_pred hhhhHHHHHHHHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccc
Confidence 25899999999999999999998865 9999999888777789999999999999999999998 99999999999
Q ss_pred eeeCCCC-cEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccc-----
Q 039322 573 LLLDLEY-EAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLS----- 646 (708)
Q Consensus 573 ill~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~----- 646 (708)
||+.+.. .+||||||.|...... ..+....+-.|.|||.+.+-.|+...|+||.||+|||+.||+..|....
T Consensus 567 iLVNE~k~iLKLCDfGSA~~~~en--eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML 644 (752)
T KOG0670|consen 567 ILVNESKNILKLCDFGSASFASEN--EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML 644 (752)
T ss_pred eEeccCcceeeeccCccccccccc--cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHH
Confidence 9998875 4799999999876543 3344456778999999999999999999999999999999999886411
Q ss_pred --------ccc------------------------cccccccccccc--ccCCC------CC---CCCchhHHHHHHHHH
Q 039322 647 --------LIS------------------------SSSLNTDIALDE--ILDPR------LP---PPSRSVQEKLISIME 683 (708)
Q Consensus 647 --------~~~------------------------~~~~~~~~~~~~--~~~~~------~~---~~~~~~~~~~~~l~~ 683 (708)
.+. ............ .+.|. +. ..+.........|.+
T Consensus 645 rl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rd 724 (752)
T KOG0670|consen 645 RLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRD 724 (752)
T ss_pred HHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHH
Confidence 000 000000000000 00000 00 011122334567899
Q ss_pred HHHhccCCCCCCCCCHHHHHHHh
Q 039322 684 VAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 684 li~~cl~~dP~~RPs~~evl~~l 706 (708)
|+..|+..||++|.|..+.++|-
T Consensus 725 LLdkml~LdP~KRit~nqAL~Hp 747 (752)
T KOG0670|consen 725 LLDKMLILDPEKRITVNQALKHP 747 (752)
T ss_pred HHHHHhccChhhcCCHHHHhcCC
Confidence 99999999999999999999874
No 403
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-30 Score=241.55 Aligned_cols=261 Identities=26% Similarity=0.362 Sum_probs=193.9
Q ss_pred cccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----Ce
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA-----RH 510 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-----~~ 510 (708)
+.+-.+.||-|+||.||.+++ ++|+.||.|++..- .......+.+.+|++++...+|.|++..++...-+ .+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv--fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqE 131 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV--FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE 131 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchH--HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHH
Confidence 344567799999999999955 58999999998642 23455678899999999999999999888776433 24
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.|.++|.|.. +|...+-.. +.++...+.-+++||.+||.|||+. +|.||||||.|.+++++..+||||||+|+
T Consensus 132 iYV~TELmQS-DLHKIIVSP---Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLAR 204 (449)
T KOG0664|consen 132 LYVLTELMQS-DLHKIIVSP---QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLAR 204 (449)
T ss_pred HHHHHHHHHh-hhhheeccC---CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccc
Confidence 6788898865 888777544 4488899999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCC-ccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccccccc--------------
Q 039322 591 FLKPESS-NWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------------- 654 (708)
Q Consensus 591 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------------- 654 (708)
..+.+.. ..+..+.|..|.|||.+.+.+ |+.+.||||.||++.|++..+..|...+.....+.+
T Consensus 205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ 284 (449)
T KOG0664|consen 205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY 284 (449)
T ss_pred ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence 8765543 345567899999999998754 889999999999999999988888643332111110
Q ss_pred -cccccccccCCCCCCCCc-------hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 655 -TDIALDEILDPRLPPPSR-------SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 655 -~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.+.....++......+.. ......-+-..+...++..||.+|.+.++.+.+.
T Consensus 285 ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 285 ACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred HhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 011111122222221111 0001111234566789999999999999887654
No 404
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.96 E-value=4.6e-32 Score=263.46 Aligned_cols=269 Identities=27% Similarity=0.419 Sum_probs=163.2
Q ss_pred CcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcc
Q 039322 50 MLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLS 129 (708)
Q Consensus 50 ~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~ 129 (708)
.|+.|++.+|.++. +|..++.+.+|..|++.+|.|. .+| .|..+..|.+|+++.|.|.-++.+....++++.+|||.
T Consensus 184 ~L~~ld~~~N~L~t-lP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLR 260 (565)
T KOG0472|consen 184 RLKHLDCNSNLLET-LPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLR 260 (565)
T ss_pred HHHhcccchhhhhc-CChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeecc
Confidence 34444444444443 4555555555555555555555 334 45555555555555555555555555555556666666
Q ss_pred cCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEeccccccccc-------------------------
Q 039322 130 RNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGE------------------------- 184 (708)
Q Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~------------------------- 184 (708)
+|+++ ..|..+..+.+|++||+++|.|+ ..|..++++ +|+.|-+.+|.++..
T Consensus 261 dNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dgl 337 (565)
T KOG0472|consen 261 DNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGL 337 (565)
T ss_pred ccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCC
Confidence 66655 23344445555556666666655 344455555 555555555554100
Q ss_pred ------------CCc-ccC---CCCC--------------------------CCEEEccCcccc----------------
Q 039322 185 ------------IPK-ELG---KLNS--------------------------LTELILRGNQFT---------------- 206 (708)
Q Consensus 185 ------------~~~-~~~---~l~~--------------------------L~~L~l~~n~l~---------------- 206 (708)
.+. .+. .+-+ +...+++.|++.
T Consensus 338 S~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l 417 (565)
T KOG0472|consen 338 SQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDL 417 (565)
T ss_pred CCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHH
Confidence 000 000 0000 122333333333
Q ss_pred -------ccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCC
Q 039322 207 -------GRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGG 279 (708)
Q Consensus 207 -------~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~ 279 (708)
+.+|..++.+++|..|+|++|.+. ..|..++.+..|+.|+++.|++. ..|.++-.+..++.+-.++|++..
T Consensus 418 ~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~ 495 (565)
T KOG0472|consen 418 VLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGS 495 (565)
T ss_pred HhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccc
Confidence 123334455667777777777776 56666777777777777777776 566666666666666667778876
Q ss_pred CCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCC
Q 039322 280 EIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQG 327 (708)
Q Consensus 280 ~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 327 (708)
+.+..+..|.+|..|||.+|.+. .+|..+.+|.+|++|+++||++.-
T Consensus 496 vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr~ 542 (565)
T KOG0472|consen 496 VDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFRQ 542 (565)
T ss_pred cChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccCC
Confidence 77777899999999999999998 788889999999999999999993
No 405
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-29 Score=239.32 Aligned_cols=257 Identities=22% Similarity=0.291 Sum_probs=195.5
Q ss_pred ccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC------
Q 039322 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA------ 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~------ 508 (708)
.+|.-.+.+|.|.- .|..| +.-.++.||+|+...+ ..+....++..+|...+..++|+||++++.+|.-.
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p--f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP--FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCc--cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 56777778898888 56666 3346889999998765 34445567888999999999999999999999543
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
...|+|||+|.. +|...+.. .++-..+..+.+|+..|++|||+. ||+||||||+||++..+..+||.|||+
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVILM-----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence 357999999965 99888862 267788999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-----------------
Q 039322 589 AKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS----------------- 651 (708)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~----------------- 651 (708)
|+....+ -..+..+.+..|.|||++.+..+.+.+||||.||++.||++|+.-|......+..
T Consensus 165 ar~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 165 ARTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred hcccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 9865543 3456678899999999999999999999999999999999999988642211000
Q ss_pred -------------ccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 652 -------------SLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 652 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.+.....-+-+-|..++...+...-......+++.+|+..||++|-+++++++|
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000000000111111111111111112246788899999999999999999987
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-29 Score=261.49 Aligned_cols=252 Identities=25% Similarity=0.375 Sum_probs=203.2
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|+....+|.|.||.||+|+. .+++..|+|+++-. ...+.+-.++|+-+++..+|+||+.++|.+...+..|+.
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe----p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE----PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeecc----CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 6888999999999999999954 57899999998862 223466678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||||.+|+|++.-+... .+++.++..+.+...+|++|||+. |-+|||||-.||++++.|.+|++|||.+..+..
T Consensus 91 MEycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 99999999999876544 488899999999999999999999 999999999999999999999999999988876
Q ss_pred CCCccccccccccccCcccc---ccCCCCcchhHHHHHHHHHHHHhCCCC-CCccccccccccccccccccccCCCCCCC
Q 039322 595 ESSNWTEFAGTYGYVAPELA---YTMKITEKCDVYSFGVLVLEAIKGKHP-RDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslG~~l~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
.-.+.....||+.|||||+. ..+.|...+|||+.|+...|+---+.| |+... +.. .....+.-.++..
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp-mr~----l~LmTkS~~qpp~--- 236 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP-MRA----LFLMTKSGFQPPT--- 236 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch-HHH----HHHhhccCCCCCc---
Confidence 66667788999999999975 356788999999999999999877776 22110 000 0001111111111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
....-.+...|.++++.|+.++|++||+++.+++|
T Consensus 237 lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 11222344468899999999999999999988764
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1e-28 Score=250.54 Aligned_cols=201 Identities=24% Similarity=0.364 Sum_probs=170.4
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcc--hhHhH--HHHHHHHHHHHhcc---CCceeeEEEEEe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCD--QIADQ--KEFLIEVKALTEIR---HRNIVKFYGFCS 506 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~--~~~~~e~~~l~~l~---h~~iv~l~~~~~ 506 (708)
..+|...+.+|+|+||.|+.|.++ +...|+||++.+..... +.+++ -.+-.|+.+|..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 467899999999999999999765 45679999998742221 11111 24667999999997 999999999999
Q ss_pred eCCeeEEEEEeccCC-CHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 507 HARHSFLVYELLERG-SLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
+++.+|++||-...| +|.+++.... .+++++..-|++||+.|+++||++ ||||||||-+||.++.+|-+||+|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEee
Confidence 999999999976544 8999997554 489999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccCccccccCCCC-cchhHHHHHHHHHHHHhCCCCCC
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT-EKCDVYSFGVLVLEAIKGKHPRD 643 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~elltg~~p~~ 643 (708)
||.|..... ..+...+||..|.|||++.+.+|- ..-|||++|+++|.++..+.||.
T Consensus 714 fgsaa~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999976543 345678999999999999998864 46899999999999999988874
No 408
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.4e-28 Score=224.26 Aligned_cols=250 Identities=20% Similarity=0.314 Sum_probs=184.1
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEE-EEeeCCee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYG-FCSHARHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~-~~~~~~~~ 511 (708)
.+.|.+.+.+|+|.||.+-+++++ +.+.+|+|.+..+. ...++|.+|...--.| .|.||+.-|+ .|+..+.+
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 467899999999999999999775 57789999998743 4567899998875556 4899998875 46677888
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC--CCCcEEEeecccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD--LEYEAHVADFGIA 589 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfg~a 589 (708)
+.++||++.|+|.+-+...+ +.+....+++.|+++|+.|||++ ++||||||.+|||+- +...+|+||||..
T Consensus 98 vF~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred EEeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccc
Confidence 89999999999998876544 78888999999999999999999 999999999999993 3357999999999
Q ss_pred cccCCCCCccccccccccccCccccccC-----CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYTM-----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD 664 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 664 (708)
+..+. .....--+..|.|||..... ...+.+|||.||+++|.++||..||.- .+.....+...........
T Consensus 171 ~k~g~---tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk-a~~~d~~Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 171 RKVGT---TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK-ASIMDKPYWEWEQWLKRKN 246 (378)
T ss_pred cccCc---eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchh-hhccCchHHHHHHHhcccC
Confidence 75442 22222345678999976532 356789999999999999999999972 2222222222222222222
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVT 703 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 703 (708)
++.+.. ........+.+.++-+.++|++|--..++.
T Consensus 247 ~~~P~~---F~~fs~~a~r~Fkk~lt~~~~drcki~~~k 282 (378)
T KOG1345|consen 247 PALPKK---FNPFSEKALRLFKKSLTPRFKDRCKIWTAK 282 (378)
T ss_pred ccCchh---hcccCHHHHHHHHHhcCCcccccchhHHHH
Confidence 222222 222233466777789999999995444443
No 409
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=3.4e-26 Score=225.31 Aligned_cols=198 Identities=31% Similarity=0.521 Sum_probs=170.9
Q ss_pred ccccceeccccCccEEEEEeCC-CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
|...+.||+|++|.||+|...+ ++.+|+|.+...... ...+.+.+|++.+++++|+|++++++++...+..++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEe
Confidence 4567889999999999997764 889999999864221 246788999999999999999999999999899999999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
|+++++|.+++..... .+++..+..++.+++.++++||+. +++|+|++|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 78 YCEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred ccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 9999999999975432 178899999999999999999999 99999999999999999999999999998765432
Q ss_pred -CccccccccccccCcccc-ccCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 039322 597 -SNWTEFAGTYGYVAPELA-YTMKITEKCDVYSFGVLVLEAIKGKHPRD 643 (708)
Q Consensus 597 -~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~elltg~~p~~ 643 (708)
.......++..|++||.. ....++.++|||++|+++++|++|+.||+
T Consensus 153 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 153 AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 122344677889999998 66667889999999999999999999986
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=2.1e-26 Score=227.18 Aligned_cols=199 Identities=26% Similarity=0.399 Sum_probs=166.5
Q ss_pred HHHHHHhccccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEE
Q 039322 429 DEIVRATNDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYG 503 (708)
Q Consensus 429 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~ 503 (708)
+.+....+.|...++||+|.|++||+|... ..+.||+|.+... .....+..|+++|..+. +.||+++.+
T Consensus 29 q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t------s~p~ri~~El~~L~~~gG~~ni~~~~~ 102 (418)
T KOG1167|consen 29 QDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT------SSPSRILNELEMLYRLGGSDNIIKLNG 102 (418)
T ss_pred hhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc------cCchHHHHHHHHHHHhccchhhhcchh
Confidence 344555678999999999999999999543 4678999998753 34566889999999994 999999999
Q ss_pred EEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEE
Q 039322 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAH 582 (708)
Q Consensus 504 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~k 582 (708)
++..++..++|+||++.....++... ++..++..+++.+..||+++|++ |||||||||+|++.+.. +.-.
T Consensus 103 ~~rnnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~ 173 (418)
T KOG1167|consen 103 CFRNNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGV 173 (418)
T ss_pred hhccCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCce
Confidence 99999999999999999998888743 67899999999999999999999 99999999999999754 6779
Q ss_pred EeecccccccCCCC----------------------------------C----------ccccccccccccCcccccc-C
Q 039322 583 VADFGIAKFLKPES----------------------------------S----------NWTEFAGTYGYVAPELAYT-M 617 (708)
Q Consensus 583 l~Dfg~a~~~~~~~----------------------------------~----------~~~~~~~~~~y~aPE~~~~-~ 617 (708)
|+|||+|..++... . ......||++|.|||++.. .
T Consensus 174 LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~ 253 (418)
T KOG1167|consen 174 LVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP 253 (418)
T ss_pred EEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc
Confidence 99999998321000 0 0113569999999998765 4
Q ss_pred CCCcchhHHHHHHHHHHHHhCCCCC
Q 039322 618 KITEKCDVYSFGVLVLEAIKGKHPR 642 (708)
Q Consensus 618 ~~~~~~DvwslG~~l~elltg~~p~ 642 (708)
..++++||||.|+++..+++++.||
T Consensus 254 ~QttaiDiws~GVI~Lslls~~~PF 278 (418)
T KOG1167|consen 254 RQTTAIDIWSAGVILLSLLSRRYPF 278 (418)
T ss_pred CcCCccceeeccceeehhhcccccc
Confidence 5788999999999999999999997
No 411
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=2.7e-25 Score=209.96 Aligned_cols=162 Identities=25% Similarity=0.291 Sum_probs=124.2
Q ss_pred CCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 039322 521 GSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWT 600 (708)
Q Consensus 521 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 600 (708)
|+|.++++..+ ..+++.+++.++.|++.||+|||++ + ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 68999997543 4589999999999999999999998 6 999999999999999 99998654322
Q ss_pred cccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC---CCCCCCCchhHHH
Q 039322 601 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD---PRLPPPSRSVQEK 677 (708)
Q Consensus 601 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 677 (708)
..|++.|+|||++.+..++.++|||||||++|||+||+.||....... .....+.. ...+.........
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 135 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS-------AILEILLNGMPADDPRDRSNLESV 135 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc-------HHHHHHHHHhccCCccccccHHHH
Confidence 257899999999999999999999999999999999999986432110 01111111 1101100111122
Q ss_pred HH--HHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 678 LI--SIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 678 ~~--~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .+.+++.+||+.+|++||++.|++++++
T Consensus 136 ~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 136 SAARSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred HhhhhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 22 5889999999999999999999999875
No 412
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=3.7e-26 Score=265.19 Aligned_cols=199 Identities=17% Similarity=0.186 Sum_probs=141.4
Q ss_pred HhccC-CceeeEEEEE-------eeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 039322 491 TEIRH-RNIVKFYGFC-------SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562 (708)
Q Consensus 491 ~~l~h-~~iv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ 562 (708)
+.++| +||++++++| .+.+..+.++||+ +++|.+++.... ..+++.+++.++.||++||+|||++ |
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 34455 5888888887 2334677888987 559999996432 4589999999999999999999999 9
Q ss_pred eEEccCCCCCeeeCCC-------------------CcEEEeecccccccCCCCC----------------cccccccccc
Q 039322 563 IVHQDISSKNLLLDLE-------------------YEAHVADFGIAKFLKPESS----------------NWTEFAGTYG 607 (708)
Q Consensus 563 ivH~dlk~~Nill~~~-------------------~~~kl~Dfg~a~~~~~~~~----------------~~~~~~~~~~ 607 (708)
|+||||||+|||++.. +.+|++|||+++....... ......||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 9999999999999653 4556666666653211000 0011347888
Q ss_pred ccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHh
Q 039322 608 YVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFS 687 (708)
Q Consensus 608 y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 687 (708)
|+|||++.+..++.++|||||||++|||++|..|+..... ....+.....++. ..........++.+
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 247 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----------TMSSLRHRVLPPQ---ILLNWPKEASFCLW 247 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----------HHHHHHHhhcChh---hhhcCHHHHHHHHH
Confidence 9999999999999999999999999999999888652110 0001100011110 01112234577889
Q ss_pred ccCCCCCCCCCHHHHHHHhhC
Q 039322 688 CLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 688 cl~~dP~~RPs~~evl~~l~~ 708 (708)
||+++|.+||+|.|+++|-+|
T Consensus 248 ~L~~~P~~Rps~~eil~h~~~ 268 (793)
T PLN00181 248 LLHPEPSCRPSMSELLQSEFI 268 (793)
T ss_pred hCCCChhhCcChHHHhhchhh
Confidence 999999999999999987653
No 413
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.92 E-value=2.4e-27 Score=253.44 Aligned_cols=222 Identities=30% Similarity=0.396 Sum_probs=147.3
Q ss_pred CCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEcc
Q 039322 122 NLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILR 201 (708)
Q Consensus 122 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 201 (708)
+|+++++++|+++.+. ..+..+.+|+.|+..+|+++ ..|..+..+.+|+.|++.+|.+. -+|....+++.|++|+|.
T Consensus 242 nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 242 NLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred cceeeecchhhhhcch-HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeeh
Confidence 4444444444444333 33444444444444444443 33333344444444444444444 344445556666666666
Q ss_pred CccccccCCccc--------------------------CCCCCCCeEeccCCcccccCCCCCCccccceeecccCccccc
Q 039322 202 GNQFTGRLPPEI--------------------------GSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVL 255 (708)
Q Consensus 202 ~n~l~~~~~~~~--------------------------~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 255 (708)
.|+|. .+|+.+ ..++.|+.|++.+|.++...-..+.+..+|+.|+|++|+|..
T Consensus 319 ~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~ 397 (1081)
T KOG0618|consen 319 SNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNS 397 (1081)
T ss_pred hcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccccc
Confidence 66665 222211 012235556666666665555566777889999999999986
Q ss_pred CCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCC-CCCccc
Q 039322 256 ELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGP-VPNSTA 334 (708)
Q Consensus 256 ~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~-~~~~~~ 334 (708)
.....+.+++.|++|+||+|+++ .+|..+..++.|++|...+|++. ..| .+..++.|+.+|+|.|+++.. .|....
T Consensus 398 fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p 474 (1081)
T KOG0618|consen 398 FPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP 474 (1081)
T ss_pred CCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCC
Confidence 66677899999999999999998 67788899999999999999998 667 788899999999999999864 344444
Q ss_pred cccCcccccccccCcC
Q 039322 335 FRNAPVEALKGNKGLC 350 (708)
Q Consensus 335 ~~~~~~~~~~~n~~~c 350 (708)
.++++-+.++||+|.-
T Consensus 475 ~p~LkyLdlSGN~~l~ 490 (1081)
T KOG0618|consen 475 SPNLKYLDLSGNTRLV 490 (1081)
T ss_pred CcccceeeccCCcccc
Confidence 4788999999999744
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-27 Score=232.95 Aligned_cols=299 Identities=19% Similarity=0.165 Sum_probs=232.9
Q ss_pred CCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccC-CccccccccccCCCCCCCEEE
Q 039322 49 PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNS-NNLTGNISEALGIYPNLTFID 127 (708)
Q Consensus 49 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~~~~~L~~L~ 127 (708)
+..+.+.|+.|.|+++++..|+.+.+|+.||||+|+|+.+.|++|..+++|.+|-+.+ |+|+.+..++|.++..|+.|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 4577888888888888888888999999999999999988899999998888877777 889989899999999999999
Q ss_pred cccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEeccccccc------------ccCCcccCCCCCC
Q 039322 128 LSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIV------------GEIPKELGKLNSL 195 (708)
Q Consensus 128 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~------------~~~~~~~~~l~~L 195 (708)
+.-|++..+..++|..+++|..|.+.+|.+..+....|..+..++.+.+..|.+- ...+..++.....
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 9889998888888889999999999999988666668888888999988888732 2234445555556
Q ss_pred CEEEccCccccccCCcccCCC-CCCCeEeccCCcccccCC-CCCCccccceeecccCcccccCCChhhhhhcccchhhcc
Q 039322 196 TELILRGNQFTGRLPPEIGSL-VDLEYLDLSANRFNNSVP-ENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDAS 273 (708)
Q Consensus 196 ~~L~l~~n~l~~~~~~~~~~~-~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls 273 (708)
....+.++++..+.+..|... .++..=-.+.....+..| ..|..+++|+.|+|++|+|+.+.+.+|.++..+++|.|.
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~ 306 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLT 306 (498)
T ss_pred chHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcC
Confidence 666666777665555444322 222111112222333444 358889999999999999999999999999999999999
Q ss_pred cccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCCccccccCccccccccc
Q 039322 274 HNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNK 347 (708)
Q Consensus 274 ~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~ 347 (708)
.|+|..+....|.++..|+.|+|.+|+|+...|.+|..+.+|..|++-.|++.|.+...+--.+++.-+..|||
T Consensus 307 ~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~ 380 (498)
T KOG4237|consen 307 RNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNP 380 (498)
T ss_pred cchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCC
Confidence 99998777788899999999999999999999999999999999999999999876554333333433444443
No 415
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=4.1e-27 Score=229.01 Aligned_cols=274 Identities=23% Similarity=0.228 Sum_probs=196.9
Q ss_pred EEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEccc-C
Q 039322 77 YFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSM-N 155 (708)
Q Consensus 77 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~-N 155 (708)
..+.++-.++ .+|..+. +.-.+++|..|.|+.+++.+|..+++|+.|||++|+|+.|.+.+|.++++|.+|-+.+ |
T Consensus 50 ~VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 50 IVDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred eEEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 4566666666 5555444 4566677777777777777777777777777777777777777777777776665555 7
Q ss_pred cccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcc------
Q 039322 156 NITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRF------ 229 (708)
Q Consensus 156 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i------ 229 (708)
+|+.+..+.|+++..|+.|.+.-|++.....+.|..+++|..|.+.+|.+..+-...|..+.+++.+++..|.+
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL 206 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNL 206 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccccc
Confidence 77776677777777777777777777766666777777777777777777744334677777777777777662
Q ss_pred ------------------------------cccCCCCCCc-cccce-eecccCcccccCCChhhhhhcccchhhcccccC
Q 039322 230 ------------------------------NNSVPENLGN-LLKLH-YLGLSNNQFVLELPKELEKLVQLSELDASHNLF 277 (708)
Q Consensus 230 ------------------------------~~~~~~~~~~-l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i 277 (708)
..+.+..|.. +.++. .+....+....-...+|.++++|+.|+|++|+|
T Consensus 207 ~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i 286 (498)
T KOG4237|consen 207 PWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKI 286 (498)
T ss_pred chhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCcc
Confidence 1111111111 11111 122222233322335799999999999999999
Q ss_pred CCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCCcc-ccccCcccccccccCcCCCC
Q 039322 278 GGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNST-AFRNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 278 ~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~-~~~~~~~~~~~~n~~~c~~~ 353 (708)
+++-+..|.+...+++|+|..|+|.......|.++.+|+.|+|.+|++++..|... ....+..+.+-.|||.|+|-
T Consensus 287 ~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 287 TRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCR 363 (498)
T ss_pred chhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccc
Confidence 99999999999999999999999998888999999999999999999999877643 34567888899999999984
No 416
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.91 E-value=2.1e-26 Score=246.26 Aligned_cols=333 Identities=28% Similarity=0.359 Sum_probs=200.4
Q ss_pred CcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCC-CCCcccccccCCCccCCCCccccCCCCccEEeccC
Q 039322 4 LSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLE-NPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSE 82 (708)
Q Consensus 4 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 82 (708)
|+.|||++|++. --|..+..+.+|+.|+++.|.|. ..|.+.. ..+|+.|.|..|.+.. +|.++..+.+|++||+++
T Consensus 47 L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~~-lP~~~~~lknl~~LdlS~ 123 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQS-LPASISELKNLQYLDLSF 123 (1081)
T ss_pred eEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhhc-CchhHHhhhcccccccch
Confidence 788899999888 57777888888888888888887 4454443 3678888888888776 788888888888888888
Q ss_pred CccccccCccCcCCCCCcE-----------------------------------------EEccCCccccccccccCCCC
Q 039322 83 NHFQGTIPKILRNCSSLIR-----------------------------------------VRLNSNNLTGNISEALGIYP 121 (708)
Q Consensus 83 n~i~~~~~~~~~~l~~L~~-----------------------------------------L~l~~n~i~~~~~~~~~~~~ 121 (708)
|++. ..|..+..+..+.. |+|++|.+.. -.+..+.
T Consensus 124 N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~---~dls~~~ 199 (1081)
T KOG0618|consen 124 NHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEV---LDLSNLA 199 (1081)
T ss_pred hccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhheeeecccchhhh---hhhhhcc
Confidence 8887 44433333333322 4444444331 1123333
Q ss_pred CCCEEEcccCcceeeCCCC------------------CCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccc
Q 039322 122 NLTFIDLSRNDFYGEISSN------------------WGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVG 183 (708)
Q Consensus 122 ~L~~L~l~~n~l~~~~~~~------------------~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 183 (708)
+|+.|..+.|++..+.-.. -..-.+|++++++.|+++. .|+++..+.+|+.|+..+|+++
T Consensus 200 ~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~- 277 (1081)
T KOG0618|consen 200 NLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV- 277 (1081)
T ss_pred chhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-
Confidence 3444444433332211000 0011345555555555552 3355555555555555555554
Q ss_pred cCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCC-C------------------------
Q 039322 184 EIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENL-G------------------------ 238 (708)
Q Consensus 184 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~-~------------------------ 238 (708)
.+|..+...++|+.|.+..|.++ .+|.....+++|++|+|..|+|.. .|+.+ .
T Consensus 278 ~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~-lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e 355 (1081)
T KOG0618|consen 278 ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPS-LPDNFLAVLNASLNTLNVSSNKLSTLPSYEE 355 (1081)
T ss_pred hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccc-cchHHHhhhhHHHHHHhhhhccccccccccc
Confidence 45555555555666666666665 555556667777777777777763 22211 1
Q ss_pred -ccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccE
Q 039322 239 -NLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISV 317 (708)
Q Consensus 239 -~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 317 (708)
.++.|+.|.+.+|.++...-..+.++.+|+.|+|++|++.......+.+++.|++|+||||+++ .+|.....+..|++
T Consensus 356 ~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~t 434 (1081)
T KOG0618|consen 356 NNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHT 434 (1081)
T ss_pred hhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHH
Confidence 1223566666666666555555666666777777777666444455566666677777777776 55566666666777
Q ss_pred EecCCCcCCCCCCCccccccCcccccccccCc
Q 039322 318 IDISDNQLQGPVPNSTAFRNAPVEALKGNKGL 349 (708)
Q Consensus 318 l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~ 349 (708)
|...+|++...+ ....++.++.+.++.|...
T Consensus 435 L~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 435 LRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLS 465 (1081)
T ss_pred HhhcCCceeech-hhhhcCcceEEecccchhh
Confidence 777766666544 5556666777777766543
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.5e-23 Score=232.18 Aligned_cols=263 Identities=26% Similarity=0.316 Sum_probs=165.4
Q ss_pred CcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCC
Q 039322 4 LSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSEN 83 (708)
Q Consensus 4 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n 83 (708)
-..|+|+.|.++. .|..+. ++|+.|++++|+++. +|.. .++|+.|++++|.+++. |.. .++|+.|++++|
T Consensus 203 ~~~LdLs~~~Lts-LP~~l~--~~L~~L~L~~N~Lt~-LP~l--p~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls~N 272 (788)
T PRK15387 203 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLTS-LPAL--PPELRTLEVSGNQLTSL-PVL---PPGLLELSIFSN 272 (788)
T ss_pred CcEEEcCCCCCCc-CCcchh--cCCCEEEccCCcCCC-CCCC--CCCCcEEEecCCccCcc-cCc---ccccceeeccCC
Confidence 4578888888884 455553 478888888888874 4432 25777777777777763 332 356777777777
Q ss_pred ccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCc
Q 039322 84 HFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPR 163 (708)
Q Consensus 84 ~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 163 (708)
.++ .+|..+ ++|+.|+|++|+++.++. .+++|++|+|++|+++.+.. . ..+|+.|++++|+|+. +|.
T Consensus 273 ~L~-~Lp~lp---~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~-l---p~~L~~L~Ls~N~L~~-LP~ 339 (788)
T PRK15387 273 PLT-HLPALP---SGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA-L---PSELCKLWAYNNQLTS-LPT 339 (788)
T ss_pred chh-hhhhch---hhcCEEECcCCccccccc----cccccceeECCCCccccCCC-C---cccccccccccCcccc-ccc
Confidence 776 334322 456777777777775543 24567777777777765432 1 2356677777777764 332
Q ss_pred cccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccc
Q 039322 164 EIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKL 243 (708)
Q Consensus 164 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L 243 (708)
. ..+|+.|+|++|+|+. +|.. .++|+.|++++|+|+ .+|.. ..+|+.|+|++|+|++ .|.. .++|
T Consensus 340 l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L 404 (788)
T PRK15387 340 L---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPVL---PSEL 404 (788)
T ss_pred c---ccccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccccceEEecCCcccC-CCCc---ccCC
Confidence 1 1467777777777773 3432 246677777777777 34432 2457777777777773 3432 2456
Q ss_pred eeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcc
Q 039322 244 HYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCF 309 (708)
Q Consensus 244 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~ 309 (708)
+.|++++|+|+. +|..+ .+|+.|++++|+|+ .+|..+..+++|+.|+|++|+|++..+..+
T Consensus 405 ~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 405 KELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 777777777763 44322 35666777777776 556666677777777777777776555544
No 418
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=6.4e-23 Score=245.19 Aligned_cols=331 Identities=23% Similarity=0.242 Sum_probs=188.8
Q ss_pred CCCCcEEECCCCc------ccccCCccccCCC-CCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCC
Q 039322 1 MRSLSILDLNQNQ------FKGVLPPSVSNLT-NLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGG 73 (708)
Q Consensus 1 l~~L~~L~l~~n~------i~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~ 73 (708)
|++|+.|.+..+. +....|+.|..++ +|+.|.+.++.++ .+|..+...+|+.|++++|.+.. ++.++..++
T Consensus 557 m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f~~~~L~~L~L~~s~l~~-L~~~~~~l~ 634 (1153)
T PLN03210 557 MRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNFRPENLVKLQMQGSKLEK-LWDGVHSLT 634 (1153)
T ss_pred CccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcCCccCCcEEECcCccccc-cccccccCC
Confidence 4556666665442 2222344455543 4666666666664 44555555666777777766655 455566666
Q ss_pred CccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcc
Q 039322 74 ALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVS 153 (708)
Q Consensus 74 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 153 (708)
+|++|+|+++.....+|. ++.+++|++|+|++|..-...+..+.++++|+.|++++|..-...|..+ ++++|+.|+++
T Consensus 635 ~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Ls 712 (1153)
T PLN03210 635 GLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLS 712 (1153)
T ss_pred CCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCC
Confidence 777777766543334443 6666677777776665433445566666677777776653222223222 56666777776
Q ss_pred cCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCcccc-------ccCCcccCCCCCCCeEeccC
Q 039322 154 MNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFT-------GRLPPEIGSLVDLEYLDLSA 226 (708)
Q Consensus 154 ~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------~~~~~~~~~~~~L~~L~l~~ 226 (708)
+|......|.. ..+|++|++++|.++ .+|..+ .+++|++|.+.++... ...+..+...++|+.|+|++
T Consensus 713 gc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~ 787 (1153)
T PLN03210 713 GCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSD 787 (1153)
T ss_pred CCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCC
Confidence 66543333322 345666777777665 344333 3455555555543221 01111122235677777777
Q ss_pred CcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCC
Q 039322 227 NRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIP 306 (708)
Q Consensus 227 N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 306 (708)
|......|..++++++|+.|++++|...+.+|..+ .+++|+.|++++|......|.. .++|+.|+|++|.++ .+|
T Consensus 788 n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP 862 (1153)
T PLN03210 788 IPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVP 862 (1153)
T ss_pred CCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cCh
Confidence 76555667777777777777777764333455444 5667777777776543333332 356777777777776 566
Q ss_pred CcccccccccEEecCC-CcCCCCCCCccccccCccccccc
Q 039322 307 NCFEGIRGISVIDISD-NQLQGPVPNSTAFRNAPVEALKG 345 (708)
Q Consensus 307 ~~~~~l~~L~~l~l~~-N~l~~~~~~~~~~~~~~~~~~~~ 345 (708)
..+..+++|+.|++++ |.+.+.++....++.++.+.+.+
T Consensus 863 ~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~ 902 (1153)
T PLN03210 863 WWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSD 902 (1153)
T ss_pred HHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCC
Confidence 6777777777777777 45555544444455555555443
No 419
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=5.6e-23 Score=212.77 Aligned_cols=254 Identities=20% Similarity=0.257 Sum_probs=187.3
Q ss_pred cccccceeccccCccEEEEEeCCC--cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc----CCceeeEEEEE-eeCC
Q 039322 437 DFDAQYCIGNGGHGSVYRAELPSG--QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR----HRNIVKFYGFC-SHAR 509 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~----h~~iv~l~~~~-~~~~ 509 (708)
+|.+.+.||+|+||.||.+..... +.+|+|........ ....+..|..++..+. .+++..+++.. ..++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~----~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGS----KPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccC----CCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence 899999999999999999976543 47888887652211 1125777888888886 36999999999 5777
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-----CcEEEe
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-----YEAHVA 584 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-----~~~kl~ 584 (708)
..|+||+.+ |.+|.++..... .+.++..+..+++.|++.+|+++|+. |++||||||.|+.+... ..+.+.
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~ll 169 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLL 169 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEE
Confidence 889999977 679999886555 56799999999999999999999999 99999999999999765 468999
Q ss_pred eccccc--ccCCCCC-------c-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc
Q 039322 585 DFGIAK--FLKPESS-------N-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN 654 (708)
Q Consensus 585 Dfg~a~--~~~~~~~-------~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~ 654 (708)
|||+|+ .+..... . .....||.+|.+++...+...+++.|+||++.++.|+..|..||............
T Consensus 170 DfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~ 249 (322)
T KOG1164|consen 170 DFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF 249 (322)
T ss_pred ecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH
Confidence 999998 3321111 0 12356999999999999999999999999999999999999998643321111000
Q ss_pred cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
........... .....+. .+.++...+-..+..++|....+...+
T Consensus 250 ~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l 294 (322)
T KOG1164|consen 250 EKDPRKLLTDR----FGDLKPE---EFAKILEYIDSLDYEDKPDYEKLAELL 294 (322)
T ss_pred HHHhhhhcccc----ccCCChH---HHHHHHHHhhccCCcCCCCHHHHHHHH
Confidence 00111111110 1111222 344444455558899999998887765
No 420
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.4e-23 Score=191.21 Aligned_cols=257 Identities=21% Similarity=0.299 Sum_probs=201.8
Q ss_pred hccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC-CceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH-RNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~l~~~~~~~~~~~ 512 (708)
.+.|...+.||.|+||.+|.| ...+|+.||||+-+.. ....++..|.++++.+++ ..|+.+.-+..+...-.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~------a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK------AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc------CCCcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 478999999999999999999 5678999999997653 234567889999999974 78889999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC---CcEEEeecccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE---YEAHVADFGIA 589 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~a 589 (708)
+|||.+ |.+|.+.+.... +.++.++++-.|-|++.-++|+|.+ +++||||||+|.|+.-+ ..+.++|||+|
T Consensus 88 lVMdLL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa 161 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA 161 (341)
T ss_pred eeeecc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccch
Confidence 999988 679999987554 5689999999999999999999999 99999999999999654 56899999999
Q ss_pred cccCCCCCc-------cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 039322 590 KFLKPESSN-------WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 590 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
..+.+.... .....||.+|.+-....+...+.+.|+-|+|.++..+--|..||....+.. .....+.+
T Consensus 162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t-----k~QKyEkI 236 (341)
T KOG1163|consen 162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT-----KKQKYEKI 236 (341)
T ss_pred hhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh-----HHHHHHHH
Confidence 977543222 234578999999988888888999999999999999999999998654322 12223333
Q ss_pred cCCCCCCCC-chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 663 LDPRLPPPS-RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 663 ~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
...+...+. ..+...+.++.-.+..|-...-++-|...-+-+.++|
T Consensus 237 ~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFri 283 (341)
T KOG1163|consen 237 SEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRI 283 (341)
T ss_pred HHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHH
Confidence 333333222 1223334456777778888888888988777776654
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=4.8e-24 Score=197.39 Aligned_cols=249 Identities=19% Similarity=0.289 Sum_probs=187.4
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
.+.....+|.+...|..|+|++. |..+++|++.... ........|..|.-.++-+.||||++++|.|..+.+..++.
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~--~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVRE--VTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS 266 (448)
T ss_pred hhhhhhhhhccCCCccccccccc-Ccchhhhhhhhhh--cchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence 44556678999999999999995 6667788876421 11223456888888888889999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE-EccCCCCCeeeCCCCcEEEe--eccccccc
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIV-HQDISSKNLLLDLEYEAHVA--DFGIAKFL 592 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iv-H~dlk~~Nill~~~~~~kl~--Dfg~a~~~ 592 (708)
.||+.|+|+..++.... ...+-.+..+++.++|+|++|||+.. +++ ---+.+..+++|++.+++|+ |--++...
T Consensus 267 q~mp~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred eeccchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 99999999999987664 33577899999999999999999974 444 44689999999999888774 33222110
Q ss_pred CCCCCccccccccccccCccccccCCCC---cchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKIT---EKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
....-.+.|++||.++..+.+ +++|+|||++++||+.|.+.||...+.++.......+.++.-+.+..
T Consensus 344 -------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgi-- 414 (448)
T KOG0195|consen 344 -------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGI-- 414 (448)
T ss_pred -------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCc--
Confidence 112235889999998876544 47999999999999999999998766554444333333332222222
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+.+|+.-|++.||.+||.+..|+-.|+
T Consensus 415 --------s~hm~klm~icmnedpgkrpkfdmivpile 444 (448)
T KOG0195|consen 415 --------SRHMNKLMNICMNEDPGKRPKFDMIVPILE 444 (448)
T ss_pred --------cHHHHHHHHHHhcCCCCcCCCcceehhhHH
Confidence 234667788899999999999998876553
No 422
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=5.9e-23 Score=227.58 Aligned_cols=263 Identities=25% Similarity=0.264 Sum_probs=208.9
Q ss_pred CCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEcc
Q 039322 26 TNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLN 105 (708)
Q Consensus 26 ~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 105 (708)
..-..|+|++|.++ .+|..+. ++|+.|.+++|+++. +|.. .++|++|++++|+|+ .+|.. .++|++|+|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~-~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP-AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh-cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 34678999999998 4666554 489999999999998 4432 478999999999999 45542 4689999999
Q ss_pred CCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccC
Q 039322 106 SNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEI 185 (708)
Q Consensus 106 ~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 185 (708)
+|.++.++. .+.+|+.|++++|+++.+.. .+++|+.|+|++|+|+.+ |.. ..+|+.|++++|+|++ +
T Consensus 271 ~N~L~~Lp~----lp~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLTHLPA----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchhhhhh----chhhcCEEECcCCccccccc----cccccceeECCCCccccC-CCC---cccccccccccCcccc-c
Confidence 999996543 23679999999999986543 357899999999999954 432 2468899999999984 4
Q ss_pred CcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhc
Q 039322 186 PKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLV 265 (708)
Q Consensus 186 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 265 (708)
|.. .++|+.|+|++|+|+ .+|.. ..+|+.|++++|+|+. +|... .+|+.|++++|+|+. +|.. .+
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l~---~~L~~LdLs~N~Lt~-LP~l---~s 402 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTS-LPALP---SGLKELIVSGNRLTS-LPVL---PS 402 (788)
T ss_pred ccc---ccccceEecCCCccC-CCCCC---Ccccceehhhcccccc-Ccccc---cccceEEecCCcccC-CCCc---cc
Confidence 532 258999999999999 45543 3578899999999994 55433 579999999999995 4443 35
Q ss_pred ccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCC
Q 039322 266 QLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN 331 (708)
Q Consensus 266 ~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 331 (708)
+|+.|++++|+|+. +|.. ..+|+.|++++|+|+ .+|..+..+++|+.|++++|++++..+.
T Consensus 403 ~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred CCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 79999999999984 5543 357889999999998 6788899999999999999999987554
No 423
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.2e-22 Score=208.79 Aligned_cols=170 Identities=20% Similarity=0.206 Sum_probs=130.7
Q ss_pred HHHhccccccceeccccCccEEEEEeC--CCcEEEEEEcCCCCCc-chhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 432 VRATNDFDAQYCIGNGGHGSVYRAELP--SGQVVAIKKFHSPLPC-DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 432 ~~~~~~~~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
....++|.+.+.||+|+||+||+|.+. +++.||||+....... ......+.|.+|++++++++|+|+++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 345578999999999999999999654 5778899987532110 1123456799999999999999998533222
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccC-CCCCeeeCCCCcEEEeecc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDI-SSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg 587 (708)
+..++||||++|++|... . . .. ...++.|+++||+|||++ ||+|||| ||+||+++.++.+||+|||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~--~----~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-R--P----HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CCcEEEEEccCCCCHHHh-C--c----cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 457999999999999732 1 1 11 146789999999999999 9999999 9999999999999999999
Q ss_pred cccccCCCCCcc--------ccccccccccCccccccC
Q 039322 588 IAKFLKPESSNW--------TEFAGTYGYVAPELAYTM 617 (708)
Q Consensus 588 ~a~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~ 617 (708)
+|+.+....... +...++..|+|||++...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 999775443211 245578889999998653
No 424
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.4e-22 Score=191.75 Aligned_cols=250 Identities=17% Similarity=0.239 Sum_probs=193.0
Q ss_pred ccccccceeccccCccEEEE-EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~l 513 (708)
-.|+++++||+|.||.++.| ..-+++.||||.-... .+..++..|.+.++.|. .++|..++.+...+.+-.+
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk------S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL 101 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK------SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL 101 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc------CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence 47999999999999999999 4568999999986542 23456778999999885 7999999988888889999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-----cEEEeeccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-----EAHVADFGI 588 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-----~~kl~Dfg~ 588 (708)
|+|.+ |.+|.|++.-++ ++++.+++..+|.|++.-++|+|++ .+|.|||||+|+|+...+ .+.++|||+
T Consensus 102 VidLL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred hhhhh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 99988 679999987554 5699999999999999999999999 999999999999997653 489999999
Q ss_pred ccccCCCCCc-------cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 039322 589 AKFLKPESSN-------WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDE 661 (708)
Q Consensus 589 a~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 661 (708)
|..+.++... .....||.+||+-....+.+.+++.|.-|+|-++..++-|..||....... .....+.
T Consensus 176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t-----nK~kYeK 250 (449)
T KOG1165|consen 176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT-----NKEKYEK 250 (449)
T ss_pred hhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc-----hHHHHHH
Confidence 9988755443 235679999999999999999999999999999999999999998654321 1222222
Q ss_pred ccCCCCCCC-CchhHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 039322 662 ILDPRLPPP-SRSVQEKLISIMEVAFSCLNESPESRPTMKVV 702 (708)
Q Consensus 662 ~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 702 (708)
+=+.+...+ ...+...+.++..-+.-.=..+-.+-|..+-+
T Consensus 251 IGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdyl 292 (449)
T KOG1165|consen 251 IGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYL 292 (449)
T ss_pred hccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHH
Confidence 323222222 22233334445555445555566666765543
No 425
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.88 E-value=8.7e-22 Score=235.51 Aligned_cols=307 Identities=19% Similarity=0.204 Sum_probs=242.3
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCC-CCCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLE-NPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
++|+.|++.++.++. .|..| .+.+|++|+|++|++.. ++..+. .++|+.|++++|.....+| .++.+++|++|+|
T Consensus 589 ~~Lr~L~~~~~~l~~-lP~~f-~~~~L~~L~L~~s~l~~-L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L 664 (1153)
T PLN03210 589 PKLRLLRWDKYPLRC-MPSNF-RPENLVKLQMQGSKLEK-LWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKL 664 (1153)
T ss_pred cccEEEEecCCCCCC-CCCcC-CccCCcEEECcCccccc-cccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEe
Confidence 468999999999985 45556 57899999999999974 454443 4899999999987655566 4788899999999
Q ss_pred cCCccccccCccCcCCCCCcEEEccCC-ccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccc
Q 039322 81 SENHFQGTIPKILRNCSSLIRVRLNSN-NLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITG 159 (708)
Q Consensus 81 ~~n~i~~~~~~~~~~l~~L~~L~l~~n-~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 159 (708)
++|.....+|..+.++++|+.|++++| .++.++. .+ ++++|++|+|++|......+. ...+|+.|+|++|.++
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~-~i-~l~sL~~L~Lsgc~~L~~~p~---~~~nL~~L~L~~n~i~- 738 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPT-GI-NLKSLYRLNLSGCSRLKSFPD---ISTNISWLDLDETAIE- 738 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCC-cC-CCCCCCEEeCCCCCCcccccc---ccCCcCeeecCCCccc-
Confidence 998776788999999999999999997 4554443 33 789999999999865433332 2468999999999998
Q ss_pred cCCccccCCCCCCEEeccccccc-------ccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCccccc
Q 039322 160 GIPREIGNSSQLQALDLSLNHIV-------GEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNS 232 (708)
Q Consensus 160 ~~~~~~~~l~~L~~L~L~~n~l~-------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~ 232 (708)
..|..+ .+++|++|++.++... ...+..+...++|+.|+|++|...+.+|..+.++++|+.|+|++|..-+.
T Consensus 739 ~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~ 817 (1153)
T PLN03210 739 EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLET 817 (1153)
T ss_pred cccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCe
Confidence 445544 5789999999875432 11122233457999999999987778999999999999999999754446
Q ss_pred CCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCccccc
Q 039322 233 VPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGI 312 (708)
Q Consensus 233 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l 312 (708)
+|..+ .+++|+.|++++|......|.. ..+|+.|+|++|.|+ .+|..+..+++|+.|++++|+--..+|..+..+
T Consensus 818 LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L 892 (1153)
T PLN03210 818 LPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKL 892 (1153)
T ss_pred eCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccc
Confidence 67655 7899999999998654455543 358999999999998 778889999999999999954334677788899
Q ss_pred ccccEEecCCCc
Q 039322 313 RGISVIDISDNQ 324 (708)
Q Consensus 313 ~~L~~l~l~~N~ 324 (708)
++|+.+++++|.
T Consensus 893 ~~L~~L~l~~C~ 904 (1153)
T PLN03210 893 KHLETVDFSDCG 904 (1153)
T ss_pred cCCCeeecCCCc
Confidence 999999999884
No 426
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=2.3e-23 Score=226.53 Aligned_cols=247 Identities=22% Similarity=0.267 Sum_probs=190.5
Q ss_pred cccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 516 (708)
++...+.+|.+.|=.|.+|++..|. |+||+|-+..........++-..|++ ....++||.+++..+-...+..|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 6778889999999999999998886 99999977554444455555566666 566689999999998888888899999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc--ccCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK--FLKP 594 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~--~~~~ 594 (708)
|..+ +|.|.+..+.. +...+.+.|+.|+..|+..+|+. ||+|||||.+|||++.-.-+.|+||..-+ +...
T Consensus 102 yvkh-nLyDRlSTRPF---L~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRPF---LVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccchH---HHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9977 99999976543 67788889999999999999999 99999999999999999999999997543 1111
Q ss_pred CCC-c----cccccccccccCccccccC-----------CCCcchhHHHHHHHHHHHHh-CCCCCCcccccccc---ccc
Q 039322 595 ESS-N----WTEFAGTYGYVAPELAYTM-----------KITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSS---SLN 654 (708)
Q Consensus 595 ~~~-~----~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~---~~~ 654 (708)
++. . +........|.|||.+... ..+++.||||+||+++|+++ |++||+..+..... ...
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 111 1 2334455789999976541 14568999999999999998 78899854433222 112
Q ss_pred cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.+..++.+.|. .+++++..|++.||++|-++++.++.-
T Consensus 255 ~e~~Le~Ied~--------------~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 255 PEQLLEKIEDV--------------SLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred HHHHHHhCcCc--------------cHHHHHHHHHccCchhccCHHHHHHhh
Confidence 22223333332 478999999999999999999999863
No 427
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=2.1e-20 Score=196.34 Aligned_cols=260 Identities=28% Similarity=0.410 Sum_probs=195.3
Q ss_pred ccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCC-ceeeEEEEEeeCCeeEEEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR-NIVKFYGFCSHARHSFLVYE 516 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-~iv~l~~~~~~~~~~~lv~e 516 (708)
|.....||.|+||.||++... ..+++|.+........ .....+.+|+.+++.+.|+ +++++.+.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS-KEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccch-hHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 567788999999999999775 7899999886432221 2467799999999999988 79999999977777899999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEEeecccccccCCC
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFLKPE 595 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~ 595 (708)
++.++++.+++........++......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.+......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 999999997775443112478899999999999999999999 999999999999999988 7999999999865443
Q ss_pred CC------ccccccccccccCcccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 039322 596 SS------NWTEFAGTYGYVAPELAYT---MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 596 ~~------~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
.. ......++..|+|||...+ .......|+||+|++++++++|..||....... ..............+.
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS-ATSQTLKIILELPTPS 234 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc-cHHHHHHHHHhcCCcc
Confidence 32 2356789999999999887 578889999999999999999999976433200 0000000000000000
Q ss_pred CCCCCch--hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 039322 667 LPPPSRS--VQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704 (708)
Q Consensus 667 ~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 704 (708)
....... .......+.+++.+|+..+|..|.++.+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 0000000 0112245778888999999999999887654
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=4.1e-22 Score=218.59 Aligned_cols=259 Identities=19% Similarity=0.242 Sum_probs=187.9
Q ss_pred cccceeccccCccEEEEE-eCCCcEEEEEEcCCCC-CcchhHh-HHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 439 DAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPL-PCDQIAD-QKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 439 ~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~-~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
...+.+|.|++|.|+.+. ....+.++.|.++... ....... ...+..|+.+-..+.|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456679999999888773 3344445555544210 1111122 222677888888889999988888777766666669
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
|||++ +|..++... ..++..++..+++|+..|++|+|+. |+.|||+|++|++++.+|.+||+|||.+..+.-+
T Consensus 401 E~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 999998765 2478889999999999999999999 9999999999999999999999999999866544
Q ss_pred CC----ccccccccccccCccccccCCCCc-chhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 596 SS----NWTEFAGTYGYVAPELAYTMKITE-KCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 596 ~~----~~~~~~~~~~y~aPE~~~~~~~~~-~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
.. ......|+..|+|||.+.+..|++ ..||||.|+++..|.+|+.||.......... .........+ ....+
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--~~~~~~~~~~-~~~~~ 550 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--KTNNYSDQRN-IFEGP 550 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch--hhhccccccc-cccCh
Confidence 33 234577999999999999999887 5899999999999999999987433211110 0000000000 00111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..-....+..-..++.++++.||.+|-|+++|++.=|
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W 587 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEW 587 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhhChH
Confidence 1122233445678889999999999999999987644
No 429
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=2.7e-21 Score=216.07 Aligned_cols=264 Identities=27% Similarity=0.370 Sum_probs=169.7
Q ss_pred CCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccC
Q 039322 27 NLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNS 106 (708)
Q Consensus 27 ~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~ 106 (708)
+.++|++++++++. +|..+. ++|+.|++++|.+++ +|..+. .+|++|++++|+++ .+|..+. ++|+.|+|++
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip-~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP-EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSI 250 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc-cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcC
Confidence 45667777776653 343332 356666777776665 344333 46788888888877 4555443 4688888888
Q ss_pred CccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCC
Q 039322 107 NNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIP 186 (708)
Q Consensus 107 n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 186 (708)
|+++.++.. +. .+|+.|++++|+++.+ |..+. ++|+.|+|++|+|+. .|..+. ++|+.|++++|+++. +|
T Consensus 251 N~L~~LP~~-l~--s~L~~L~Ls~N~L~~L-P~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP 320 (754)
T PRK15370 251 NRITELPER-LP--SALQSLDLFHNKISCL-PENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LP 320 (754)
T ss_pred CccCcCChh-Hh--CCCCEEECcCCccCcc-ccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CC
Confidence 888755432 22 4688888888888754 33332 478888888888874 343332 467888888888873 44
Q ss_pred cccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcc
Q 039322 187 KELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQ 266 (708)
Q Consensus 187 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 266 (708)
..+ .++|+.|++++|.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|++++|+|+ .+|..+.. .
T Consensus 321 ~~l--~~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~~--s 389 (754)
T PRK15370 321 ETL--PPGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLPA--A 389 (754)
T ss_pred ccc--cccceeccccCCccc-cCChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHHH--H
Confidence 433 257888888888887 3555443 57888888888887 4555443 57888888888887 44554543 6
Q ss_pred cchhhcccccCCCCCchhh----cCcccCCceecccccccCCCCCcccccccccEEecCCCcCCC
Q 039322 267 LSELDASHNLFGGEIPFQI----CSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQG 327 (708)
Q Consensus 267 L~~L~ls~N~i~~~~~~~~----~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 327 (708)
|+.|++++|++. ..|..+ ..++.+..|++.+|+++. ..+.+|+.+ ++.+.+.|
T Consensus 390 L~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~g 446 (754)
T PRK15370 390 LQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQG 446 (754)
T ss_pred HHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccC
Confidence 888888888887 444433 334677788888888762 344455554 34444444
No 430
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=1.8e-21 Score=217.41 Aligned_cols=264 Identities=24% Similarity=0.351 Sum_probs=203.4
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEecc
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVS 81 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~ 81 (708)
++...|+|++++++. .|..+ .++|+.|+|++|+|+. +|..+. ++|+.|++++|.+++ +|..+. .+|+.|+|+
T Consensus 178 ~~~~~L~L~~~~Lts-LP~~I--p~~L~~L~Ls~N~Lts-LP~~l~-~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 178 NNKTELRLKILGLTT-IPACI--PEQITTLILDNNELKS-LPENLQ-GNIKTLYANSNQLTS-IPATLP--DTIQEMELS 249 (754)
T ss_pred cCceEEEeCCCCcCc-CCccc--ccCCcEEEecCCCCCc-CChhhc-cCCCEEECCCCcccc-CChhhh--ccccEEECc
Confidence 457899999999996 45545 3579999999999984 555443 589999999999987 565554 479999999
Q ss_pred CCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccC
Q 039322 82 ENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGI 161 (708)
Q Consensus 82 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 161 (708)
+|+++ .+|..+. ++|+.|+|++|+|+.++. .+. ++|++|++++|+++.+.. .+ .++|+.|++++|.++. +
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~LP~-~l~--~sL~~L~Ls~N~Lt~LP~-~l--p~sL~~L~Ls~N~Lt~-L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKISCLPE-NLP--EELRYLSVYDNSIRTLPA-HL--PSGITHLNVQSNSLTA-L 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccCcccc-ccC--CCCcEEECCCCccccCcc-cc--hhhHHHHHhcCCcccc-C
Confidence 99999 6676664 589999999999996543 332 589999999999986543 22 2579999999999985 4
Q ss_pred CccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccc
Q 039322 162 PREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLL 241 (708)
Q Consensus 162 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~ 241 (708)
|..+ .++|+.|++++|.++. +|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. .
T Consensus 320 P~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~ 388 (754)
T PRK15370 320 PETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--A 388 (754)
T ss_pred Cccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--H
Confidence 4433 2689999999999984 565553 79999999999998 5666553 68999999999999 4555554 3
Q ss_pred cceeecccCcccccCCChhhh----hhcccchhhcccccCCCCCchhhcCcccCCceeccccccc
Q 039322 242 KLHYLGLSNNQFVLELPKELE----KLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLS 302 (708)
Q Consensus 242 ~L~~L~l~~n~l~~~~~~~~~----~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 302 (708)
+|+.|++++|+|+ .+|..+. .++++..|++.+|++.. ..+.+|+.| ++.+.+.
T Consensus 389 sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~ 445 (754)
T PRK15370 389 ALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQ 445 (754)
T ss_pred HHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhccccc
Confidence 7999999999998 5565544 34788999999999972 234455555 4445444
No 431
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=5.2e-21 Score=182.21 Aligned_cols=185 Identities=13% Similarity=0.143 Sum_probs=138.0
Q ss_pred CCCchHHHHHH--HhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHH------HHHHHHHHHHhcc
Q 039322 423 EGKLVYDEIVR--ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQK------EFLIEVKALTEIR 494 (708)
Q Consensus 423 ~~~~~~~~~~~--~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~~e~~~l~~l~ 494 (708)
+....|.++.. ..++|+..+++|+|+||.||.+.. ++..+|+|+++......+ ...+ .+.+|++.+.+++
T Consensus 16 ~~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~-~~~~~f~~g~~~e~Ea~~l~rL~ 93 (232)
T PRK10359 16 DNDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTE-RFLKSFVKGDYYENLIVQTDRVR 93 (232)
T ss_pred CCcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchH-HHHHhhhhhHHHHHHHHHHHHHH
Confidence 33433444432 357899999999999999999866 577899999986443222 2222 2678999999999
Q ss_pred CCceeeEEEEEeeC--------CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEc
Q 039322 495 HRNIVKFYGFCSHA--------RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQ 566 (708)
Q Consensus 495 h~~iv~l~~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~ 566 (708)
|++|..+.+++... ...++||||++|.+|.++.. ++. ....+++.++..+|+. |++||
T Consensus 94 ~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~ 159 (232)
T PRK10359 94 SEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSG 159 (232)
T ss_pred HCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccC
Confidence 99999999886643 35789999999999988732 222 2456999999999999 99999
Q ss_pred cCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHH
Q 039322 567 DISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAI 636 (708)
Q Consensus 567 dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ell 636 (708)
|++|+||+++.++ ++++|||.......+... . .+.....+..++|+|+||+.+..+.
T Consensus 160 Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~-d-----------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 160 DPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK-D-----------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCChHHEEEeCCC-EEEEECCCcccccchhhH-H-----------HHHHHhHhcccccccceeEeehHHH
Confidence 9999999999988 999999988754321111 1 1233344667899999999875543
No 432
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.84 E-value=1e-20 Score=185.66 Aligned_cols=237 Identities=19% Similarity=0.252 Sum_probs=150.7
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc----------CCceeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR----------HRNIVKFYGF 504 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~----------h~~iv~l~~~ 504 (708)
..+...+.||.|+++.||.+++. +|+.+|+|++..+. .......+++.+|.-....+. |-.++-.++.
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~ 90 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL 90 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence 35667788999999999999664 58999999987654 233345667777765544422 2122222222
Q ss_pred Ee---------eC---Ce-----eEEEEEeccCCCHHHHhcc---ccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 039322 505 CS---------HA---RH-----SFLVYELLERGSLAAILSS---DTA-AQELGWSQRMNVIKGVADALSYLHHDCFPPI 563 (708)
Q Consensus 505 ~~---------~~---~~-----~~lv~e~~~~g~L~~~l~~---~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i 563 (708)
.. .. .. .+++|+-+.+ +|.+++.. ... ...+....+..+..|+++.+++||+. |+
T Consensus 91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---Gl 166 (288)
T PF14531_consen 91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GL 166 (288)
T ss_dssp EEETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred EEEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ce
Confidence 11 11 11 3678887754 88887642 111 11234455677789999999999999 99
Q ss_pred EEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccCccccccC--------CCCcchhHHHHHHHHHHH
Q 039322 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM--------KITEKCDVYSFGVLVLEA 635 (708)
Q Consensus 564 vH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~DvwslG~~l~el 635 (708)
+|+||+|+|++++.+|.++|+||+.....+. .......+..|.|||..... .++.+.|.|++|+++|.|
T Consensus 167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~---~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGT---RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp EEST-SGGGEEE-TTS-EEE--GGGEEETTE---EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred EecccceeeEEEcCCCCEEEcChHHHeecCc---eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 9999999999999999999999998875432 22223456889999976442 467899999999999999
Q ss_pred HhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCC
Q 039322 636 IKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESR 696 (708)
Q Consensus 636 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 696 (708)
++|..||+.......... .+ ..+.+.+..+..||..+++++|.+|
T Consensus 244 WC~~lPf~~~~~~~~~~~------------~f----~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 244 WCGRLPFGLSSPEADPEW------------DF----SRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSS-STCCCGGGSTSGG------------GG----TTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHccCCCCCCCccccccc------------cc----hhcCCcCHHHHHHHHHHccCCcccC
Confidence 999999985432111110 11 1122455678899999999999988
No 433
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=2.2e-20 Score=176.66 Aligned_cols=144 Identities=22% Similarity=0.202 Sum_probs=109.5
Q ss_pred cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhH----------------------hHHHHHHHHHHHHhccCCce
Q 039322 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIA----------------------DQKEFLIEVKALTEIRHRNI 498 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~~i 498 (708)
...||+|++|.||+|...+|+.||||+++......... .......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 45799999999999988789999999997642211100 01223459999999988776
Q ss_pred eeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEEccCCCCCeeeCC
Q 039322 499 VKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYL-HHDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 499 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~ivH~dlk~~Nill~~ 577 (708)
.....+... ..++||||++++++....... ..++..+...++.|++.+|+++ |+. ||+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 443333222 238999999998776543222 3478899999999999999999 688 999999999999998
Q ss_pred CCcEEEeecccccccC
Q 039322 578 EYEAHVADFGIAKFLK 593 (708)
Q Consensus 578 ~~~~kl~Dfg~a~~~~ 593 (708)
++.++|+|||+|....
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 5789999999997543
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=1.3e-19 Score=168.37 Aligned_cols=187 Identities=11% Similarity=0.042 Sum_probs=138.8
Q ss_pred cccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEEEEEe
Q 039322 439 DAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 439 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
.....|++|+||+||.+.. .+.+++.+.+..............+.+|+++|+++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999998866 577888777764211111111235889999999995 5889999886 346899999
Q ss_pred ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccC-CCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 518 LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDI-SSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
++|.+|.+.... ....++.|++.+++++|++ ||+|||| ||+||+++.++.++|+|||+|....+..
T Consensus 80 I~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999998754311 1235778999999999999 9999999 7999999999999999999998655433
Q ss_pred Cc-----cc--------cccccccccCccccccC-CCC-cchhHHHHHHHHHHHHhCCCCCC
Q 039322 597 SN-----WT--------EFAGTYGYVAPELAYTM-KIT-EKCDVYSFGVLVLEAIKGKHPRD 643 (708)
Q Consensus 597 ~~-----~~--------~~~~~~~y~aPE~~~~~-~~~-~~~DvwslG~~l~elltg~~p~~ 643 (708)
.. .. -...++.|++|+...-- ..+ .+.+.++-|+.+|.++|+..++.
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 21 00 11245677777743321 233 56789999999999999999864
No 435
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.82 E-value=3.2e-20 Score=193.70 Aligned_cols=209 Identities=27% Similarity=0.488 Sum_probs=159.9
Q ss_pred HHhccCCceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCe-EEccC
Q 039322 490 LTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPI-VHQDI 568 (708)
Q Consensus 490 l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i-vH~dl 568 (708)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.|.+.... .++++.....+.++|+.||+|+|+- +| +|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 457889999999999999999999999999999999997633 5689999999999999999999987 44 89999
Q ss_pred CCCCeeeCCCCcEEEeecccccccCC--CCCccccccccccccCccccccCC-------CCcchhHHHHHHHHHHHHhCC
Q 039322 569 SSKNLLLDLEYEAHVADFGIAKFLKP--ESSNWTEFAGTYGYVAPELAYTMK-------ITEKCDVYSFGVLVLEAIKGK 639 (708)
Q Consensus 569 k~~Nill~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~-------~~~~~DvwslG~~l~elltg~ 639 (708)
++.|++++..+.+|++|||+...... ............-|.|||.+.... .+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999876642 111122233567899999987631 456799999999999999999
Q ss_pred CCCCccccccccccccccccccccC-CC--CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 640 HPRDFLSLISSSSLNTDIALDEILD-PR--LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 640 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.||+........ ++....+.+ +. +.+......+....+..++.+||..+|++||++++|-..++
T Consensus 156 ~~~~~~~~~~~~----~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~ 222 (484)
T KOG1023|consen 156 GPFDLRNLVEDP----DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLL 222 (484)
T ss_pred CccccccccCCh----HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence 999853321111 112222222 22 11111111133336889999999999999999999987664
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=1.9e-19 Score=171.23 Aligned_cols=143 Identities=20% Similarity=0.204 Sum_probs=111.7
Q ss_pred cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchh----------------------HhHHHHHHHHHHHHhccCCce
Q 039322 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQI----------------------ADQKEFLIEVKALTEIRHRNI 498 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~----------------------~~~~~~~~e~~~l~~l~h~~i 498 (708)
.+.||+|++|.||+|...+|+.||||+++........ .....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999998778999999999864321000 002234678999999999987
Q ss_pred eeEEEEEeeCCeeEEEEEeccCCCHHHH-hcccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEccCCCCCeeeC
Q 039322 499 VKFYGFCSHARHSFLVYELLERGSLAAI-LSSDTAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 499 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~ 576 (708)
.....+.... .++||||++++++... +.. ..++..+...++.|++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 5544443332 4899999998855433 322 236788999999999999999999 8 999999999999999
Q ss_pred CCCcEEEeecccccccC
Q 039322 577 LEYEAHVADFGIAKFLK 593 (708)
Q Consensus 577 ~~~~~kl~Dfg~a~~~~ 593 (708)
++.++|+|||++....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 8999999999998654
No 437
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.80 E-value=1.7e-21 Score=202.85 Aligned_cols=260 Identities=21% Similarity=0.229 Sum_probs=148.7
Q ss_pred CccccCCCCccEEeccCCccccc----cCccCcCCCCCcEEEccCCcccc------ccccccCCCCCCCEEEcccCccee
Q 039322 66 PHNVCRGGALQYFGVSENHFQGT----IPKILRNCSSLIRVRLNSNNLTG------NISEALGIYPNLTFIDLSRNDFYG 135 (708)
Q Consensus 66 ~~~~~~l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~l~~n~i~~------~~~~~~~~~~~L~~L~l~~n~l~~ 135 (708)
...+..+.+|+.|+++++.++.. ++..+...++|++|+++++.+.. ..+..+..+++|++|++++|.+..
T Consensus 16 ~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 95 (319)
T cd00116 16 TELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGP 95 (319)
T ss_pred HHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCCh
Confidence 34444555677777777766432 33445556667777777766652 223445566677777777777654
Q ss_pred eCCCCCCCCC---CCCEEEcccCcccc----cCCccccCC-CCCCEEeccccccccc----CCcccCCCCCCCEEEccCc
Q 039322 136 EISSNWGKCP---KLGTLNVSMNNITG----GIPREIGNS-SQLQALDLSLNHIVGE----IPKELGKLNSLTELILRGN 203 (708)
Q Consensus 136 ~~~~~~~~l~---~L~~L~L~~N~i~~----~~~~~~~~l-~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n 203 (708)
..+..+..+. +|++|++++|+++. .....+..+ ++|+.|+|++|.+++. ....+..+++|++|++++|
T Consensus 96 ~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n 175 (319)
T cd00116 96 DGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANN 175 (319)
T ss_pred hHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCC
Confidence 3333333333 37777777777652 222334455 6777777777776632 2234555567777777777
Q ss_pred ccccc----CCcccCCCCCCCeEeccCCcccccC----CCCCCccccceeecccCcccccCCChhhhh-----hcccchh
Q 039322 204 QFTGR----LPPEIGSLVDLEYLDLSANRFNNSV----PENLGNLLKLHYLGLSNNQFVLELPKELEK-----LVQLSEL 270 (708)
Q Consensus 204 ~l~~~----~~~~~~~~~~L~~L~l~~N~i~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-----l~~L~~L 270 (708)
.+++. ++..+..+++|++|++++|.+++.. ...+..+++|+.|++++|.+++.....+.. .+.|+.|
T Consensus 176 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L 255 (319)
T cd00116 176 GIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTL 255 (319)
T ss_pred CCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEE
Confidence 76631 2223444567777777777765332 223455667777777777776433333322 2577777
Q ss_pred hcccccCCCC----CchhhcCcccCCceecccccccCC----CCCccccc-ccccEEecCCCcC
Q 039322 271 DASHNLFGGE----IPFQICSLKSLEKLNLSHNNLSGS----IPNCFEGI-RGISVIDISDNQL 325 (708)
Q Consensus 271 ~ls~N~i~~~----~~~~~~~~~~L~~L~l~~N~l~~~----~~~~~~~l-~~L~~l~l~~N~l 325 (708)
++++|.+++. ....+..+++|+++++++|.++.. ....+... +.|+.+++.+|++
T Consensus 256 ~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 256 SLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred EccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 7777777531 223344556677777777777643 22233333 5666667666654
No 438
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.79 E-value=1.5e-20 Score=195.50 Aligned_cols=227 Identities=26% Similarity=0.307 Sum_probs=179.6
Q ss_pred eeccccCccEEEEE----eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEEEEEe
Q 039322 443 CIGNGGHGSVYRAE----LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 443 ~ig~G~~g~vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
++|+|+||.|+.+. ...|..+|+|+.++...... .......|..++...+ ||.++++...+..+...+++++|
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~--~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~ 78 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVR--DRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDF 78 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccc--cccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhh
Confidence 37999999998773 23477899999887443222 1225666788888886 99999999999999999999999
Q ss_pred ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 039322 518 LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS 597 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 597 (708)
..+|.+...+.... .+++.....+...++-+++++|+. +++|||+|++||+++.+|++++.|||+++..-....
T Consensus 79 ~rgg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~ 152 (612)
T KOG0603|consen 79 LRGGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI 152 (612)
T ss_pred cccchhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh
Confidence 99999988876544 367788888999999999999999 999999999999999999999999999986543322
Q ss_pred ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHH
Q 039322 598 NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEK 677 (708)
Q Consensus 598 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (708)
.+||..|||||.+. ....++|.||||++++||+||..||.. +....+...++..+.. .
T Consensus 153 ----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il~~~~~~p~~----l 210 (612)
T KOG0603|consen 153 ----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRILKAELEMPRE----L 210 (612)
T ss_pred ----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHhhhccCCchh----h
Confidence 28899999999988 467889999999999999999999872 3334444434433322 2
Q ss_pred HHHHHHHHHhccCCCCCCCCCH
Q 039322 678 LISIMEVAFSCLNESPESRPTM 699 (708)
Q Consensus 678 ~~~l~~li~~cl~~dP~~RPs~ 699 (708)
......++..++..+|..|--.
T Consensus 211 ~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 211 SAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hHHHHHHHHHHHhhCHHHHhcc
Confidence 2335666778888899888744
No 439
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.79 E-value=1.5e-21 Score=203.32 Aligned_cols=277 Identities=23% Similarity=0.258 Sum_probs=166.1
Q ss_pred EEECCCCcccc-cCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCc
Q 039322 6 ILDLNQNQFKG-VLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENH 84 (708)
Q Consensus 6 ~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~ 84 (708)
.|+|..++++. -....|..+.+|++|+|+++.+....... ++..+...++|++|+++++.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~-------------------i~~~l~~~~~l~~l~l~~~~ 62 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKA-------------------LASALRPQPSLKELCLSLNE 62 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHH-------------------HHHHHhhCCCceEEeccccc
Confidence 57888888873 33556677888999999999875321100 22223334445555555554
Q ss_pred cc------cccCccCcCCCCCcEEEccCCccccccccccCCCCC---CCEEEcccCccee----eCCCCCCCC-CCCCEE
Q 039322 85 FQ------GTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPN---LTFIDLSRNDFYG----EISSNWGKC-PKLGTL 150 (708)
Q Consensus 85 i~------~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~---L~~L~l~~n~l~~----~~~~~~~~l-~~L~~L 150 (708)
+. ..++..+.++++|++|++++|.+....+..+..+.+ |++|++++|+++. .....+..+ ++|+.|
T Consensus 63 ~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L 142 (319)
T cd00116 63 TGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKL 142 (319)
T ss_pred cCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEE
Confidence 44 122334555666777777666665444444433333 7777777776652 111223444 677777
Q ss_pred EcccCccccc----CCccccCCCCCCEEeccccccccc----CCcccCCCCCCCEEEccCcccccc----CCcccCCCCC
Q 039322 151 NVSMNNITGG----IPREIGNSSQLQALDLSLNHIVGE----IPKELGKLNSLTELILRGNQFTGR----LPPEIGSLVD 218 (708)
Q Consensus 151 ~L~~N~i~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~~~~ 218 (708)
++++|.+++. ....+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++. +...+..+++
T Consensus 143 ~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~ 222 (319)
T cd00116 143 VLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKS 222 (319)
T ss_pred EcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCC
Confidence 7777777621 233455566777777777777632 223344556778888877777532 2334566777
Q ss_pred CCeEeccCCcccccCCCCCC-----ccccceeecccCcccccC----CChhhhhhcccchhhcccccCCCC----Cchhh
Q 039322 219 LEYLDLSANRFNNSVPENLG-----NLLKLHYLGLSNNQFVLE----LPKELEKLVQLSELDASHNLFGGE----IPFQI 285 (708)
Q Consensus 219 L~~L~l~~N~i~~~~~~~~~-----~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~ls~N~i~~~----~~~~~ 285 (708)
|++|++++|.+++.....+. ..++|+.|++++|.++.. ....+..+++|+.+++++|.+++. ....+
T Consensus 223 L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~ 302 (319)
T cd00116 223 LEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESL 302 (319)
T ss_pred CCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHH
Confidence 88888888877743222221 236788888888887622 233455567788888888888754 23333
Q ss_pred cCc-ccCCceecccccc
Q 039322 286 CSL-KSLEKLNLSHNNL 301 (708)
Q Consensus 286 ~~~-~~L~~L~l~~N~l 301 (708)
... +.|+.|++.+|++
T Consensus 303 ~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 303 LEPGNELESLWVKDDSF 319 (319)
T ss_pred hhcCCchhhcccCCCCC
Confidence 344 6788888887764
No 440
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=8.9e-21 Score=164.07 Aligned_cols=179 Identities=28% Similarity=0.414 Sum_probs=109.3
Q ss_pred CCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceee
Q 039322 167 NSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYL 246 (708)
Q Consensus 167 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L 246 (708)
.+.+++.|.|++|+++ ..|..+..+.+|+.|++.+|+++ .+|..++.+++|+.|+++-|++. ..|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3444455555555554 34444455555555555555555 44455555555555555555554 455555555555555
Q ss_pred cccCccccc-CCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcC
Q 039322 247 GLSNNQFVL-ELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQL 325 (708)
Q Consensus 247 ~l~~n~l~~-~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 325 (708)
||++|.+.. ..|..|-.+..|+.|+|+.|.+. ..|..++.+++|+.|.+..|.+. ..|..+..+..|++|++.+|++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 555555532 35666666777777777777776 66666777777777777777776 6677777777777777777777
Q ss_pred CCCCCCccc---cccCcccccccccCcC
Q 039322 326 QGPVPNSTA---FRNAPVEALKGNKGLC 350 (708)
Q Consensus 326 ~~~~~~~~~---~~~~~~~~~~~n~~~c 350 (708)
+-.+|.... ...-+...++.|||.-
T Consensus 186 ~vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 186 TVLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred eecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 776666443 2345666788888854
No 441
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=7.1e-19 Score=171.90 Aligned_cols=195 Identities=22% Similarity=0.326 Sum_probs=138.8
Q ss_pred cCCceeeEEEEEee---------------------------CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHH
Q 039322 494 RHRNIVKFYGFCSH---------------------------ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIK 546 (708)
Q Consensus 494 ~h~~iv~l~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~ 546 (708)
+|||||++.++|.+ +...|+||...+. +|..++-.+. .+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence 59999999988742 2346899998866 9999986554 56677788999
Q ss_pred HHHHHHHHHHhCCCCCeEEccCCCCCeee--CCCC--cEEEeecccccccCC------CCCccccccccccccCcccccc
Q 039322 547 GVADALSYLHHDCFPPIVHQDISSKNLLL--DLEY--EAHVADFGIAKFLKP------ESSNWTEFAGTYGYVAPELAYT 616 (708)
Q Consensus 547 ~i~~~l~~Lh~~~~~~ivH~dlk~~Nill--~~~~--~~kl~Dfg~a~~~~~------~~~~~~~~~~~~~y~aPE~~~~ 616 (708)
|+.+|+.|||++ ||.|||+|++|||+ ++|+ ...|+|||++---+. -.+......|....||||....
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 99999999999999 3343 468999998642111 1122334557788999998765
Q ss_pred CC-----C-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccC
Q 039322 617 MK-----I-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLN 690 (708)
Q Consensus 617 ~~-----~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 690 (708)
.+ . -.|+|.|+.|.+.||+++...||...+.+... ...+....++..++.++ ..+.+++...++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~-------~r~Yqe~qLPalp~~vp---p~~rqlV~~lL~ 495 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD-------TRTYQESQLPALPSRVP---PVARQLVFDLLK 495 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec-------hhhhhhhhCCCCcccCC---hHHHHHHHHHhc
Confidence 32 1 23899999999999999999998742211111 11122233444333333 347788889999
Q ss_pred CCCCCCCCHHHHHHHh
Q 039322 691 ESPESRPTMKVVTQQV 706 (708)
Q Consensus 691 ~dP~~RPs~~evl~~l 706 (708)
.||.+||+..-..+.+
T Consensus 496 r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 496 RDPSKRVSPNIAANVL 511 (598)
T ss_pred CCccccCCccHHHhHH
Confidence 9999999876554443
No 442
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.9e-18 Score=192.93 Aligned_cols=199 Identities=24% Similarity=0.284 Sum_probs=161.6
Q ss_pred HHHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc---CCceeeEEEEEe
Q 039322 430 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR---HRNIVKFYGFCS 506 (708)
Q Consensus 430 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~l~~~~~ 506 (708)
+.+...+.|.+.+.||+|+||+||.|...+|+.||+|+-+.+...+ |.-=.+++.+|+ -+.|..+..+..
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE-------fYI~~q~~~RLk~~~~~~~~~~~~a~~ 764 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE-------FYICLQVMERLKPQMLPSIMHISSAHV 764 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee-------eeehHHHHHhhchhhhcchHHHHHHHc
Confidence 3344567899999999999999999988889999999977643221 111122333443 245566666667
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-------CC
Q 039322 507 HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL-------EY 579 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-------~~ 579 (708)
..+..++|+||.+.|+|.+++... +.++|.-+..++.|+++.+++||.. +||||||||+|.++.. ..
T Consensus 765 ~~~~S~lv~ey~~~Gtlld~~N~~---~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~ 838 (974)
T KOG1166|consen 765 FQNASVLVSEYSPYGTLLDLINTN---KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSK 838 (974)
T ss_pred cCCcceeeeeccccccHHHhhccC---CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCccc
Confidence 778889999999999999999733 4489999999999999999999999 9999999999999943 24
Q ss_pred cEEEeecccccccC--CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 039322 580 EAHVADFGIAKFLK--PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641 (708)
Q Consensus 580 ~~kl~Dfg~a~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p 641 (708)
.++|+|||.|-.+. ++...+...++|-.+-.+|+..+..++.++|-|.++.+++-|+.|+.-
T Consensus 839 ~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 839 GLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 58999999987653 445567788899999999999999999999999999999999999876
No 443
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=7.6e-18 Score=160.55 Aligned_cols=138 Identities=20% Similarity=0.249 Sum_probs=105.5
Q ss_pred ccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-----cCCceeeEEEEEeeCC---
Q 039322 438 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-----RHRNIVKFYGFCSHAR--- 509 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~l~~~~~~~~--- 509 (708)
+.-...||+|++|.||. +++....+||++.... ....+.+.+|+++++.+ .||||++++|+++++.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~----~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRG----DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccc----cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 34456899999999996 4433334799886521 12456789999999999 5799999999998864
Q ss_pred e-eEEEEEe--ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHH-HHHHhCCCCCeEEccCCCCCeeeCC----CCcE
Q 039322 510 H-SFLVYEL--LERGSLAAILSSDTAAQELGWSQRMNVIKGVADAL-SYLHHDCFPPIVHQDISSKNLLLDL----EYEA 581 (708)
Q Consensus 510 ~-~~lv~e~--~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~Lh~~~~~~ivH~dlk~~Nill~~----~~~~ 581 (708)
. ..+|+|| +.+|+|.+++.... +++. ..++.+++.++ +|||++ +|+||||||+||+++. ++.+
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcE
Confidence 3 3378999 55789999996532 4444 35677888777 999999 9999999999999974 3479
Q ss_pred EEee-ccccc
Q 039322 582 HVAD-FGIAK 590 (708)
Q Consensus 582 kl~D-fg~a~ 590 (708)
+|+| ||...
T Consensus 149 ~LiDg~G~~~ 158 (210)
T PRK10345 149 VVCDNIGEST 158 (210)
T ss_pred EEEECCCCcc
Confidence 9999 55443
No 444
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.74 E-value=4.4e-20 Score=159.79 Aligned_cols=184 Identities=30% Similarity=0.449 Sum_probs=139.9
Q ss_pred CCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCC
Q 039322 141 WGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLE 220 (708)
Q Consensus 141 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 220 (708)
+..+.+++.|.|++|+++ .+|..++.+.+|+.|++++|+|. .+|..++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 345667777888888887 56667788888888888888887 67777888888888888888888 7888888888888
Q ss_pred eEeccCCccc-ccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccc
Q 039322 221 YLDLSANRFN-NSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHN 299 (708)
Q Consensus 221 ~L~l~~N~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N 299 (708)
.|||++|++. ...|..|..++.|+.|+|++|.+. ..|..++.+.+|+.|.+..|.+- ..|..++.+..|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 8888888876 366777888888888888888887 67777888888888888888877 67788888888888888888
Q ss_pred cccCCCCCccccc---ccccEEecCCCcCCCCCC
Q 039322 300 NLSGSIPNCFEGI---RGISVIDISDNQLQGPVP 330 (708)
Q Consensus 300 ~l~~~~~~~~~~l---~~L~~l~l~~N~l~~~~~ 330 (708)
+++ .+|..+..+ .+-+.+.+.+|++...+.
T Consensus 184 rl~-vlppel~~l~l~~~k~v~r~E~NPwv~pIa 216 (264)
T KOG0617|consen 184 RLT-VLPPELANLDLVGNKQVMRMEENPWVNPIA 216 (264)
T ss_pred eee-ecChhhhhhhhhhhHHHHhhhhCCCCChHH
Confidence 888 444444432 223445566777765543
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.73 E-value=2.6e-17 Score=161.16 Aligned_cols=147 Identities=20% Similarity=0.203 Sum_probs=113.1
Q ss_pred ccccccceeccccCccEEEEE--eCCCcEEEEEEcCCCCCcc-h-----------------h--HhHHHHHHHHHHHHhc
Q 039322 436 NDFDAQYCIGNGGHGSVYRAE--LPSGQVVAIKKFHSPLPCD-Q-----------------I--ADQKEFLIEVKALTEI 493 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~--~~~~~~vavK~~~~~~~~~-~-----------------~--~~~~~~~~e~~~l~~l 493 (708)
.-|.+.+.||+|++|.||+|. ..+|+.||+|+++...... . . .....+..|++.++++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357888999999999999997 5689999999987532110 0 0 0123467899999999
Q ss_pred cCC--ceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEEccCCC
Q 039322 494 RHR--NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP-IVHQDISS 570 (708)
Q Consensus 494 ~h~--~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-ivH~dlk~ 570 (708)
.+. .+++++++ ...++||||++++++..+.... ......+...++.|++.++++||+. | ++|||+||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 753 34555543 2348999999998887654222 2245566789999999999999999 9 99999999
Q ss_pred CCeeeCCCCcEEEeecccccccC
Q 039322 571 KNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 571 ~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
+||+++ ++.++|+|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999997544
No 446
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.73 E-value=1.2e-18 Score=178.11 Aligned_cols=176 Identities=23% Similarity=0.393 Sum_probs=139.0
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
+.|+.|++|+..+|.+|+.........++.....++.|++.|++| + +.+|+|+||.||+...+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999877766778899999999999999999 5 8999999999999999999999999998
Q ss_pred cccCCCC------CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccc
Q 039322 590 KFLKPES------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 590 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
....... ...+.-.||..||+||.+.+..|+.++||||||++++|++. =.-+++ ....+.++
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-----------r~~t~~d~ 472 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-----------RIATLTDI 472 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH-----------HHHhhhhh
Confidence 8665433 12345679999999999999999999999999999999997 223322 23344555
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 663 LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
.+..+++.. ..+.+.+ ..++.+++++.|.+||++.++.-+
T Consensus 473 r~g~ip~~~--~~d~p~e-~~ll~~lls~~p~~RP~~~~~~~~ 512 (516)
T KOG1033|consen 473 RDGIIPPEF--LQDYPEE-YTLLQQLLSPSPEERPSAIEVALH 512 (516)
T ss_pred hcCCCChHH--hhcCcHH-HHHHHHhcCCCcccCchHHHHhhh
Confidence 555555322 2222222 356669999999999977776554
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=8.6e-17 Score=156.53 Aligned_cols=138 Identities=18% Similarity=0.296 Sum_probs=115.6
Q ss_pred ceeccccCccEEEEEeCCCcEEEEEEcCCCCCcch----hHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEe
Q 039322 442 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQ----IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
+.||+|++|.||+|.. .|..|++|+......... ......+.+|++++..++|++++....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5689999999999987 677899998664322111 11235688899999999999998888888778888999999
Q ss_pred ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 518 LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++|++|.+++.... . .+..++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999985422 2 7889999999999999999 999999999999999 78999999999874
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=1.1e-16 Score=153.79 Aligned_cols=148 Identities=19% Similarity=0.171 Sum_probs=114.1
Q ss_pred HHHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchh------------------HhHHHHHHHHHHHH
Q 039322 430 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQI------------------ADQKEFLIEVKALT 491 (708)
Q Consensus 430 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~------------------~~~~~~~~e~~~l~ 491 (708)
++.+...-|.+.+.||+|+||.||+|..++|+.||||+++........ .....+..|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 444444558888999999999999998888999999987653211000 01224677888899
Q ss_pred hccCC--ceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCC
Q 039322 492 EIRHR--NIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDIS 569 (708)
Q Consensus 492 ~l~h~--~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 569 (708)
++.|+ .++..++. ...++||||+++++|.+.... .....++.+++.++.++|+. |++||||+
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~ 152 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDLS 152 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCCC
Confidence 88877 44555442 345899999999998765421 34567889999999999998 99999999
Q ss_pred CCCeeeCCCCcEEEeecccccccC
Q 039322 570 SKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 570 ~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
|+||++++++.++|+|||.+....
T Consensus 153 p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cccEEEcCCCcEEEEECCccccCC
Confidence 999999999999999999997544
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=4.3e-16 Score=172.52 Aligned_cols=142 Identities=18% Similarity=0.278 Sum_probs=114.1
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEE-cCCCCCcc---hhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKK-FHSPLPCD---QIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~-~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
...|...+.||+|+||.||+|.+... .+++|+ ..+..... .....+.+.+|+++++.++|++++....++..++.
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34556788999999999999987544 344443 22211111 11234578899999999999999988888888778
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++++|.+++. ....++.++++++.+||+. +++|||+||+||++ .++.++|+|||+++
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 899999999999999874 3567999999999999999 99999999999999 67899999999997
Q ss_pred cc
Q 039322 591 FL 592 (708)
Q Consensus 591 ~~ 592 (708)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 53
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=2.1e-16 Score=152.18 Aligned_cols=135 Identities=18% Similarity=0.317 Sum_probs=109.6
Q ss_pred eeccccCccEEEEEeCCCcEEEEEEcCCCCCcc----hhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEec
Q 039322 443 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCD----QIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELL 518 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~ 518 (708)
.||+|++|.||+|.. +|..|++|+........ ......++.+|++++..++|+++.....++..++..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 57889999865422111 1123467889999999999887766666666777789999999
Q ss_pred cCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 519 ERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 519 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+|++|.+++.... . .++.+++.+|+++|+. |++|||++|.||+++ ++.++++|||.+...
T Consensus 80 ~g~~l~~~~~~~~-------~---~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN-------D---ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH-------H---HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999999875322 1 7899999999999999 999999999999999 899999999998753
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.65 E-value=8.3e-17 Score=176.06 Aligned_cols=206 Identities=24% Similarity=0.292 Sum_probs=137.9
Q ss_pred ccccccceeccccCccEEEEEeCC-CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.+|+.++.|..|+||.||..+++. .+++|+| +.++. -+.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~---------lilRn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQN---------LILRN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccc---------hhhhc--cccccCCccee---------------
Confidence 689999999999999999998763 5678884 33310 00000 22222334333
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|+=...++..+ .++.. .+.+++|+|+. ||+|||+||+|.+++.-|++|+.|||+++..-.
T Consensus 136 ------gDc~tllk~~g---~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 ------GDCATLLKNIG---PLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred ------chhhhhcccCC---CCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 34444443322 23322 27899999999 999999999999999999999999999874321
Q ss_pred CCC---------------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 039322 595 ESS---------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659 (708)
Q Consensus 595 ~~~---------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 659 (708)
... .....+||+.|.|||++....|...+|+|++|+++||++-|+.||..... ++.+
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp--------eelf 267 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELF 267 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH--------HHHH
Confidence 100 01235799999999999999999999999999999999999999874311 1111
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC
Q 039322 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRP 697 (708)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 697 (708)
..++......+.. ......+..+++.+.++.+|..|-
T Consensus 268 g~visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 268 GQVISDDIEWPEE-DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhhhhcccccc-CcCCCHHHHHHHHHHHHhChHhhc
Confidence 1111111111111 111123467788899999999986
No 452
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=4.8e-15 Score=136.04 Aligned_cols=135 Identities=19% Similarity=0.190 Sum_probs=114.3
Q ss_pred ccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC--CceeeEEEEEeeCCeeEEEEEe
Q 039322 440 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH--RNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 440 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
+.+.||+|.++.||++...+ ..+++|.+..... ...+..|+.+++.++| ..+++++++...++..++++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35679999999999998754 7899999875321 4578889999999976 5899999999888889999999
Q ss_pred ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 518 LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++++.+..+ +......++.+++++++++|....++++|+|++|+||+++..+.++++|||.+..
T Consensus 75 ~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 998777543 4466778899999999999986444799999999999999989999999999874
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=5.3e-15 Score=140.92 Aligned_cols=140 Identities=21% Similarity=0.216 Sum_probs=99.8
Q ss_pred cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhH--------------------HHHHHHHHHHHhccCC--ce
Q 039322 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQ--------------------KEFLIEVKALTEIRHR--NI 498 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~--------------------~~~~~e~~~l~~l~h~--~i 498 (708)
.+.||+|+||.||+|...+|+.||||+++........... .....|.+.+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999998878999999998753221110000 0113566666666543 34
Q ss_pred eeEEEEEeeCCeeEEEEEeccCCCHHH-HhcccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEccCCCCCeeeC
Q 039322 499 VKFYGFCSHARHSFLVYELLERGSLAA-ILSSDTAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 499 v~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~ 576 (708)
.+.+++ ...++||||++++++.. .+.... .. .+...++.+++.++.++|. . +++|||+||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 555543 23589999999954321 111111 11 5678899999999999999 7 999999999999999
Q ss_pred CCCcEEEeecccccccC
Q 039322 577 LEYEAHVADFGIAKFLK 593 (708)
Q Consensus 577 ~~~~~kl~Dfg~a~~~~ 593 (708)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8999999999997554
No 454
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=1.4e-16 Score=175.11 Aligned_cols=255 Identities=22% Similarity=0.268 Sum_probs=187.9
Q ss_pred ccccccceeccccCccEEEEEeC--CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP--SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~ 512 (708)
..|...+.||+|+|+.|-..... ....+|+|.+.... ...........|..+-+.+. |+|+++.++...+++..+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 56777888999999999887543 24456666665432 22233445566777777776 999999999999999999
Q ss_pred EEEEeccCCCHHHHh-cccccccCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEEccCCCCCeeeCCCC-cEEEeecccc
Q 039322 513 LVYELLERGSLAAIL-SSDTAAQELGWSQRMNVIKGVADALSYLH-HDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIA 589 (708)
Q Consensus 513 lv~e~~~~g~L~~~l-~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh-~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~a 589 (708)
+++||..+|++.+.+ +... ...+....-.++.|+..++.|+| +. ++.|+|+||+|.+++..+ ..+++|||+|
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred cccCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhh
Confidence 999999999999888 4332 13556777789999999999999 77 999999999999999999 9999999999
Q ss_pred cccCC-CCCc--cccccc-cccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC
Q 039322 590 KFLKP-ESSN--WTEFAG-TYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD 664 (708)
Q Consensus 590 ~~~~~-~~~~--~~~~~~-~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 664 (708)
..+.. .+.. .....| ++.|+|||...+. -..+..|+||.|+++.-+++|..|++...... .....+..
T Consensus 173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-------~~~~~~~~ 245 (601)
T KOG0590|consen 173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-------GRYSSWKS 245 (601)
T ss_pred ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-------ccceeecc
Confidence 97765 3222 344567 9999999998874 45668999999999999999999987533211 11112222
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 704 (708)
.+.......+........++..+++..+|..|.+.+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 246 NKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 2111111112222234567777899999999999888754
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.59 E-value=1.1e-14 Score=142.99 Aligned_cols=141 Identities=16% Similarity=0.249 Sum_probs=108.2
Q ss_pred cceec-cccCccEEEEEeCCCcEEEEEEcCCCCC-----c----chhHhHHHHHHHHHHHHhccCCce--eeEEEEEeeC
Q 039322 441 QYCIG-NGGHGSVYRAELPSGQVVAIKKFHSPLP-----C----DQIADQKEFLIEVKALTEIRHRNI--VKFYGFCSHA 508 (708)
Q Consensus 441 ~~~ig-~G~~g~vy~~~~~~~~~vavK~~~~~~~-----~----~~~~~~~~~~~e~~~l~~l~h~~i--v~l~~~~~~~ 508 (708)
...|| .|+.|+||.+... +..+|||.+..... . ........+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45688 8999999999875 77899998854210 0 011234678899999999998775 7777765443
Q ss_pred C----eeEEEEEeccC-CCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 039322 509 R----HSFLVYELLER-GSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHV 583 (708)
Q Consensus 509 ~----~~~lv~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 583 (708)
. ..++|||+++| .+|.+++... .++.. .+.+++.++++||+. ||+||||||.|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999997 6999888542 23433 357899999999999 9999999999999999999999
Q ss_pred eecccccccC
Q 039322 584 ADFGIAKFLK 593 (708)
Q Consensus 584 ~Dfg~a~~~~ 593 (708)
+|||.+....
T Consensus 184 IDfg~~~~~~ 193 (239)
T PRK01723 184 IDFDRGELRT 193 (239)
T ss_pred EECCCcccCC
Confidence 9999998643
No 456
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.51 E-value=1.2e-15 Score=156.08 Aligned_cols=197 Identities=30% Similarity=0.441 Sum_probs=161.0
Q ss_pred EEcccCcceeeCCCCCC-CCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCcc
Q 039322 126 IDLSRNDFYGEISSNWG-KCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQ 204 (708)
Q Consensus 126 L~l~~n~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 204 (708)
|.|++-++.....+.+. .+..-...+|+.|++. .+|..+..+..|+.+.|..|.+. .+|.+++++..|+.|+|+.|+
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~Nq 132 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQ 132 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccch
Confidence 44555555544444443 3445566788888887 67777788888888999999998 788888899999999999999
Q ss_pred ccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchh
Q 039322 205 FTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQ 284 (708)
Q Consensus 205 l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~ 284 (708)
++ .+|..++.+ -|+.|.+++|+++ .+|+.++.+++|..||.+.|.|. ..|..+.++.+|+.|.+..|.+. ..|.+
T Consensus 133 lS-~lp~~lC~l-pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~E 207 (722)
T KOG0532|consen 133 LS-HLPDGLCDL-PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEE 207 (722)
T ss_pred hh-cCChhhhcC-cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHH
Confidence 98 778777776 4889999999998 77888888889999999999998 67888999999999999999998 66777
Q ss_pred hcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCC
Q 039322 285 ICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN 331 (708)
Q Consensus 285 ~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 331 (708)
+..+| |..||++.|+++ .+|..|.+|..|++|-|.+|+++.++..
T Consensus 208 l~~Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPAq 252 (722)
T KOG0532|consen 208 LCSLP-LIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPAQ 252 (722)
T ss_pred HhCCc-eeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCChHH
Confidence 77666 899999999998 8899999999999999999999976543
No 457
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.45 E-value=5.3e-13 Score=142.64 Aligned_cols=146 Identities=21% Similarity=0.255 Sum_probs=102.5
Q ss_pred cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHh------------------------------------HHHHH
Q 039322 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIAD------------------------------------QKEFL 484 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~------------------------------------~~~~~ 484 (708)
.+.||.|++|.||+|+.++|+.||||+.+......-..+ .-.|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999999876432110000 01245
Q ss_pred HHHHHHHhcc-----CCceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHH-HHHHHHhC
Q 039322 485 IEVKALTEIR-----HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVAD-ALSYLHHD 558 (708)
Q Consensus 485 ~e~~~l~~l~-----h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~~Lh~~ 558 (708)
.|.+.+.+++ ++++.-..-+.......++||||++|++|.++...... .. ...+++.+++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhC
Confidence 5666655553 33332222222334457899999999999887643211 11 24456666666 47888988
Q ss_pred CCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 559 CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 559 ~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|++|+|++|.||+++.++.++++|||++..+.+
T Consensus 277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred ---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 999999999999999999999999999987653
No 458
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.45 E-value=1.2e-13 Score=132.54 Aligned_cols=201 Identities=20% Similarity=0.307 Sum_probs=139.3
Q ss_pred HHhccCCceeeEEEEEeeCC-----eeEEEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 039322 490 LTEIRHRNIVKFYGFCSHAR-----HSFLVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPI 563 (708)
Q Consensus 490 l~~l~h~~iv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i 563 (708)
+-++.|.|||++..|+.+.+ ...++.|||..|++.++|++.. ....+......+|+.||..||.|||+. .|.+
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence 45567999999999986543 4678999999999999997543 234577888899999999999999985 6799
Q ss_pred EEccCCCCCeeeCCCCcEEEeecccccccCCC---C--CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhC
Q 039322 564 VHQDISSKNLLLDLEYEAHVADFGIAKFLKPE---S--SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKG 638 (708)
Q Consensus 564 vH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~---~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg 638 (708)
+|+++..+-|++..+|-+|++----. ...+. . .......+-++|.+||.=.....+.++|||+||....||.-|
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred ccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 99999999999999999998531111 11000 0 001123356899999986666677899999999999999987
Q ss_pred CCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 639 KHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 639 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
..--..... ...........+..- +.. .=..++..|++..|..||+|++++.|.
T Consensus 279 Eiq~tnseS----~~~~ee~ia~~i~~l-----en~-----lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 279 EIQSTNSES----KVEVEENIANVIIGL-----ENG-----LQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred eeccCCCcc----eeehhhhhhhheeec-----cCc-----cccCcCcccccCCCCCCcchhhhhcCc
Confidence 665221110 111111111111000 000 013566799999999999999998764
No 459
>PLN03150 hypothetical protein; Provisional
Probab=99.43 E-value=3.9e-13 Score=150.45 Aligned_cols=118 Identities=31% Similarity=0.534 Sum_probs=102.4
Q ss_pred cceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecC
Q 039322 242 KLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDIS 321 (708)
Q Consensus 242 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 321 (708)
.++.|+|++|.+++.+|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCccc--cccCcccccccccCcCCCCCCCCCcc
Q 039322 322 DNQLQGPVPNSTA--FRNAPVEALKGNKGLCGGVKGMQPCK 360 (708)
Q Consensus 322 ~N~l~~~~~~~~~--~~~~~~~~~~~n~~~c~~~~~~~~~~ 360 (708)
+|.++|.+|.... +.....+.+.+|+..|+.+. ..+|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~-l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG-LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC-CCCCc
Confidence 9999998886422 23455678999999998753 34563
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.42 E-value=2.4e-13 Score=145.74 Aligned_cols=197 Identities=34% Similarity=0.476 Sum_probs=103.5
Q ss_pred EEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCC-CCCEEEcccCcceeeCCCCCCCCCCCCEEEcccC
Q 039322 77 YFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYP-NLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMN 155 (708)
Q Consensus 77 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 155 (708)
.++++.|.+. .....+..++.++.|++.+|.++.+.+ ....+. +|+.|++++|++..+. ..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~~i~~-~~~~~~~nL~~L~l~~N~i~~l~-~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNITDIPP-LIGLLKSNLKELDLSDNKIESLP-SPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccccCcc-ccccchhhcccccccccchhhhh-hhhhccccccccccCCc
Confidence 4555555553 112223344556666666666664433 223332 5666666666665332 33455566666666666
Q ss_pred cccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCC
Q 039322 156 NITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPE 235 (708)
Q Consensus 156 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~ 235 (708)
++. ..+.....+++|+.|++++|+++ .+|........|++|.+++|.+. ..+..+..+.++..|.+.+|++. ..+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 665 23333335556666666666665 34433333444666666666433 34444555556666666666655 2244
Q ss_pred CCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCc
Q 039322 236 NLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIP 282 (708)
Q Consensus 236 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~ 282 (708)
.+..+++++.|++++|.++.... +..+.+++.|++++|.+....+
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 55555566666666666653322 5555666666666666654433
No 461
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.39 E-value=8.2e-15 Score=150.15 Aligned_cols=172 Identities=26% Similarity=0.380 Sum_probs=86.4
Q ss_pred CCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecc
Q 039322 98 SLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLS 177 (708)
Q Consensus 98 ~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 177 (708)
--...||+.|++..+ +..+..+..|+.+.|..|.+. .++..+..+..|+.|||+.|+++ ..|..+..++ |+.|-++
T Consensus 76 dt~~aDlsrNR~~el-p~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFSEL-PEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccccC-chHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 334455555555522 333344444555555555554 33444555555555555555555 3444444444 5555555
Q ss_pred cccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCC
Q 039322 178 LNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLEL 257 (708)
Q Consensus 178 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 257 (708)
+|+++ .+|..++.++.|..|+.+.|.+. .+|..++++.+|+.|.+..|++. ..|..+..| .|..||+|.|++. .+
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YL 226 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ec
Confidence 55555 44445555555555555555555 44444555555555555555554 333334433 3455555555555 44
Q ss_pred ChhhhhhcccchhhcccccCC
Q 039322 258 PKELEKLVQLSELDASHNLFG 278 (708)
Q Consensus 258 ~~~~~~l~~L~~L~ls~N~i~ 278 (708)
|-.|.+|..|+.|-|.+|+++
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred chhhhhhhhheeeeeccCCCC
Confidence 555555555555555555554
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.37 E-value=5.5e-13 Score=142.91 Aligned_cols=263 Identities=29% Similarity=0.350 Sum_probs=180.9
Q ss_pred cccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCC-CCcEEEccCCccccccccccCCCCCCCEEEcccC
Q 039322 53 RPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCS-SLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRN 131 (708)
Q Consensus 53 ~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~-~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n 131 (708)
.+.++.|.+.. ....+..+..++.|++.+|.++ .++.....+. +|+.|++++|.+..++ ..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~l~-~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIESLP-SPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchhhhh-hhhhccccccccccCCc
Confidence 45666666533 2344445578899999999998 5556566664 8999999999998543 56788899999999999
Q ss_pred cceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCc
Q 039322 132 DFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPP 211 (708)
Q Consensus 132 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 211 (708)
++..+.+ ....+++|+.|++++|+++ .+|........|++|.+++|++. ..+..+..++++..+.+.+|++. ..+.
T Consensus 174 ~l~~l~~-~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLSDLPK-LLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhhhhhh-hhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 9985544 2337788999999999998 45555556667999999999655 45667888889999999999988 4467
Q ss_pred ccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccC
Q 039322 212 EIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSL 291 (708)
Q Consensus 212 ~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L 291 (708)
.+..++++++|++++|.++.... +..+.+|+.|++++|.+....+...........+ .. +.+. ..+........+
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~ 324 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIALLLLLLELL-LN-LLLT-LKALELKLNSIL 324 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhccchhHHhh-hh-hhhh-cccccccccccc
Confidence 78888889999999999985443 8888999999999999986666554432222222 22 2222 222223333334
Q ss_pred CceecccccccCCCCCcccccccccEEecCCCcCCCC
Q 039322 292 EKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGP 328 (708)
Q Consensus 292 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 328 (708)
....+..+... ..+..+.....+..++...+.....
T Consensus 325 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (394)
T COG4886 325 LNNNILSNGET-SSPEALSILESLNNLWTLDNALDES 360 (394)
T ss_pred ccccccccccc-ccchhhcccccccCceecccccccc
Confidence 44455555554 4455555555566666665555543
No 463
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.36 E-value=1.8e-14 Score=139.69 Aligned_cols=234 Identities=26% Similarity=0.305 Sum_probs=147.4
Q ss_pred CcCCCCCcEEEccCCccc----cccccccCCCCCCCEEEcccCcc---eeeC-------CCCCCCCCCCCEEEcccCccc
Q 039322 93 LRNCSSLIRVRLNSNNLT----GNISEALGIYPNLTFIDLSRNDF---YGEI-------SSNWGKCPKLGTLNVSMNNIT 158 (708)
Q Consensus 93 ~~~l~~L~~L~l~~n~i~----~~~~~~~~~~~~L~~L~l~~n~l---~~~~-------~~~~~~l~~L~~L~L~~N~i~ 158 (708)
+..+..++.|+|++|.+. ......+.+.++|+..++|+=-- .... ..++...++|++|+||+|-+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 334455666666666654 22334455555666666655211 1111 122344567777777777776
Q ss_pred ccCCccc----cCCCCCCEEecccccccccCC-------------cccCCCCCCCEEEccCccccccC----CcccCCCC
Q 039322 159 GGIPREI----GNSSQLQALDLSLNHIVGEIP-------------KELGKLNSLTELILRGNQFTGRL----PPEIGSLV 217 (708)
Q Consensus 159 ~~~~~~~----~~l~~L~~L~L~~n~l~~~~~-------------~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~~~ 217 (708)
...+..| ..+.+|+.|.|.+|.+..... .....-+.|+.++.++|++.... ...|...+
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~ 185 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHP 185 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhcc
Confidence 4444433 345777777777777752111 12233478888888888887322 23466667
Q ss_pred CCCeEeccCCcccccCC----CCCCccccceeecccCcccccC----CChhhhhhcccchhhcccccCCCCCchhhc---
Q 039322 218 DLEYLDLSANRFNNSVP----ENLGNLLKLHYLGLSNNQFVLE----LPKELEKLVQLSELDASHNLFGGEIPFQIC--- 286 (708)
Q Consensus 218 ~L~~L~l~~N~i~~~~~----~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~--- 286 (708)
.|+.+.++.|.|..... ..|..+++|+.|||.+|-++.. ....++.+++|++|++++|.+.......+.
T Consensus 186 ~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al 265 (382)
T KOG1909|consen 186 TLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDAL 265 (382)
T ss_pred ccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHH
Confidence 88888888888863222 3467788888888888888643 334567778888888888888875554442
Q ss_pred --CcccCCceecccccccC----CCCCcccccccccEEecCCCcCC
Q 039322 287 --SLKSLEKLNLSHNNLSG----SIPNCFEGIRGISVIDISDNQLQ 326 (708)
Q Consensus 287 --~~~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~l~l~~N~l~ 326 (708)
..|+|+.|.+.+|.++. .+..++...+.|..|+|++|.+.
T Consensus 266 ~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 266 KESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred hccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 35788888888888873 22234445788888888888884
No 464
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.36 E-value=1.1e-14 Score=141.24 Aligned_cols=162 Identities=23% Similarity=0.273 Sum_probs=88.8
Q ss_pred ccCCCCccEEeccCCccccccCccC----cCCCCCcEEEccCCcccccc-------------ccccCCCCCCCEEEcccC
Q 039322 69 VCRGGALQYFGVSENHFQGTIPKIL----RNCSSLIRVRLNSNNLTGNI-------------SEALGIYPNLTFIDLSRN 131 (708)
Q Consensus 69 ~~~l~~L~~L~l~~n~i~~~~~~~~----~~l~~L~~L~l~~n~i~~~~-------------~~~~~~~~~L~~L~l~~n 131 (708)
+...++|++||||.|.+.-..+..| .++..|++|.|.+|.+.... ......-+.|+++...+|
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 3444577788888887775444443 44677778888877776221 122344556666777666
Q ss_pred cceeeCC----CCCCCCCCCCEEEcccCccccc----CCccccCCCCCCEEeccccccccc----CCcccCCCCCCCEEE
Q 039322 132 DFYGEIS----SNWGKCPKLGTLNVSMNNITGG----IPREIGNSSQLQALDLSLNHIVGE----IPKELGKLNSLTELI 199 (708)
Q Consensus 132 ~l~~~~~----~~~~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~ 199 (708)
++..... ..|...+.|+.+.++.|.|... ...+|..+++|+.|||++|-++.. +...++.+++|+.|+
T Consensus 168 rlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~ 247 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELN 247 (382)
T ss_pred ccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeec
Confidence 6643322 2234446666666666666522 223455666666666666666522 223445555666666
Q ss_pred ccCccccccCCccc-----CCCCCCCeEeccCCccc
Q 039322 200 LRGNQFTGRLPPEI-----GSLVDLEYLDLSANRFN 230 (708)
Q Consensus 200 l~~n~l~~~~~~~~-----~~~~~L~~L~l~~N~i~ 230 (708)
+++|.+...-..+| ...++|+.|.|.+|.|+
T Consensus 248 l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 248 LGDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred ccccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 66666553222221 12345555555555554
No 465
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=1.2e-12 Score=137.37 Aligned_cols=250 Identities=26% Similarity=0.268 Sum_probs=182.0
Q ss_pred ccccccceecc--ccCccEEEEEe---CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGN--GGHGSVYRAEL---PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~--G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~ 509 (708)
..|.+...+|. |.+|.||.+.. .++..+|+|.-+.+... ......=.+|+...++++ |++.++.+..+...+
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~--p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~ 191 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSP--PLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG 191 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCC--ccccccccchhhcccccCccccccccCcccccCC
Confidence 34566677899 99999999955 46888999985543321 122333445666666664 999999889999999
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHH----HHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEe
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVAD----ALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVA 584 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~ 584 (708)
..++-+|++. .++.++-+... ..++....+....+... |+.++|+. +++|-|+||.||+...+ ..++++
T Consensus 192 ~lfiqtE~~~-~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~ 265 (524)
T KOG0601|consen 192 ILFIQTELCG-ESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLT 265 (524)
T ss_pred cceeeecccc-chhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecC
Confidence 9999999985 58888776543 33567788888888888 99999999 99999999999999999 889999
Q ss_pred ecccccccCCCCCcccc-----ccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 039322 585 DFGIAKFLKPESSNWTE-----FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659 (708)
Q Consensus 585 Dfg~a~~~~~~~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 659 (708)
|||+...+.+..-.... ..+...|++||...+ .++..+|+|++|.+..+-.+|-.+.....- ......
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~------~~W~~~ 338 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN------SSWSQL 338 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC------CCcccc
Confidence 99999877655432222 267889999998655 578899999999999999987766442100 000111
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
+... .+.+.+.....++...+..+++.+|..|++++.+..+
T Consensus 339 r~~~-----ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 339 RQGY-----IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred cccc-----CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 1111 1122232333455568889999999999999988754
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.33 E-value=6.7e-12 Score=135.46 Aligned_cols=148 Identities=17% Similarity=0.213 Sum_probs=95.1
Q ss_pred hccccccceeccccCccEEEEEeCC-CcEEEEEEcCCCCCcc-------------------------h-h----HhHH--
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCD-------------------------Q-I----ADQK-- 481 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~-------------------------~-~----~~~~-- 481 (708)
..+|+. +.||+|++|.||+|+.++ |+.||||+.++..... . . +-.+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 456776 789999999999999887 9999999998643110 0 0 0011
Q ss_pred ----HHHHHHHHHHhcc----CCceeeEEEEE-eeCCeeEEEEEeccCCCHHHHh--cccc-cccCCCHHHHHHHHHHHH
Q 039322 482 ----EFLIEVKALTEIR----HRNIVKFYGFC-SHARHSFLVYELLERGSLAAIL--SSDT-AAQELGWSQRMNVIKGVA 549 (708)
Q Consensus 482 ----~~~~e~~~l~~l~----h~~iv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l--~~~~-~~~~l~~~~~~~i~~~i~ 549 (708)
.+.+|+..+.+++ +...+.+=.++ ......++||||++|+.+.++- ...+ ....+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 2344554444442 33323322222 2244578999999999998742 2211 01112222333333343
Q ss_pred HHHHHHHhCCCCCeEEccCCCCCeeeCCCC----cEEEeecccccccC
Q 039322 550 DALSYLHHDCFPPIVHQDISSKNLLLDLEY----EAHVADFGIAKFLK 593 (708)
Q Consensus 550 ~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~a~~~~ 593 (708)
... |++|+|+||.||+++.++ .+++.|||++....
T Consensus 277 ------f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ------FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 345 999999999999999988 99999999997654
No 467
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.33 E-value=2.6e-13 Score=128.42 Aligned_cols=208 Identities=24% Similarity=0.220 Sum_probs=132.9
Q ss_pred ccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccC-CccccccCccCc
Q 039322 16 GVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSE-NHFQGTIPKILR 94 (708)
Q Consensus 16 ~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~ 94 (708)
...|..++-+++|+.+.+|++.-..+..-....|.|+.+.+.+..+... | .+-....+..+.-+. .-.+|.....+.
T Consensus 204 ~~l~f~l~~f~~l~~~~~s~~~~~~i~~~~~~kptl~t~~v~~s~~~~~-~-~l~pe~~~~D~~~~E~~t~~G~~~~~~d 281 (490)
T KOG1259|consen 204 NRLSFNLNAFRNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQDV-P-SLLPETILADPSGSEPSTSNGSALVSAD 281 (490)
T ss_pred cccccchHHhhhhheeeeeccchhheeceeecCchhheeeeeccccccc-c-cccchhhhcCccCCCCCccCCceEEecc
Confidence 3456667888889999888886554433344457788777766554421 1 111112222222111 112222223333
Q ss_pred CCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 039322 95 NCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQAL 174 (708)
Q Consensus 95 ~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 174 (708)
-...|++|||++|.|+. +.....-.|.++.|++|+|.|..+.. +..+++|+.|||++|.++ .....-..+.++++|
T Consensus 282 TWq~LtelDLS~N~I~~-iDESvKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLITQ-IDESVKLAPKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchhh-hhhhhhhccceeEEeccccceeeehh--hhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 44678888888888874 34456667788888888888875543 777888888888888887 344455567788888
Q ss_pred ecccccccccCCcccCCCCCCCEEEccCccccccCC-cccCCCCCCCeEeccCCcccc
Q 039322 175 DLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLP-PEIGSLVDLEYLDLSANRFNN 231 (708)
Q Consensus 175 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~N~i~~ 231 (708)
.|+.|.|... ..++.+-+|..|++++|+|..... ..++++|-|+.+.|.+|.+.+
T Consensus 358 ~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 358 KLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred ehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 8888877632 346667788888888888873222 357788888888888888873
No 468
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=9.4e-14 Score=138.36 Aligned_cols=161 Identities=27% Similarity=0.203 Sum_probs=82.2
Q ss_pred cCCCCCcEEEccCCccccccc-cccCCCCCCCEEEcccCcceeeC--CCCCCCCCCCCEEEcccCcccccCCccc-cCCC
Q 039322 94 RNCSSLIRVRLNSNNLTGNIS-EALGIYPNLTFIDLSRNDFYGEI--SSNWGKCPKLGTLNVSMNNITGGIPREI-GNSS 169 (708)
Q Consensus 94 ~~l~~L~~L~l~~n~i~~~~~-~~~~~~~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~~-~~l~ 169 (708)
+++.+|+.+.|.++.+..... .....+++++.|||+.|-++... ......+|+|+.|+|+.|++........ ..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 445666777777666652221 34455666677777766654322 2223456666666666666652222111 1345
Q ss_pred CCCEEecccccccccCC-cccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCC-CCCCccccceeec
Q 039322 170 QLQALDLSLNHIVGEIP-KELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVP-ENLGNLLKLHYLG 247 (708)
Q Consensus 170 ~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~ 247 (708)
+|+.|.|+.|.++.... ..+..+|+|+.|+|.+|............+..|++|||++|++-.... ...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 66666666666652111 123345666666666664222333334444556666666655542221 2234455555555
Q ss_pred ccCcccc
Q 039322 248 LSNNQFV 254 (708)
Q Consensus 248 l~~n~l~ 254 (708)
++.|.|.
T Consensus 278 ls~tgi~ 284 (505)
T KOG3207|consen 278 LSSTGIA 284 (505)
T ss_pred ccccCcc
Confidence 5555554
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.30 E-value=4.1e-13 Score=127.16 Aligned_cols=223 Identities=26% Similarity=0.221 Sum_probs=156.2
Q ss_pred CCCCCEEEeeCce----eeeeCCCC--CCC---CCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcC
Q 039322 25 LTNLKELVLLYNN----LSGFIPPS--LEN---PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRN 95 (708)
Q Consensus 25 l~~L~~L~L~~n~----i~~~~~~~--~~~---~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~ 95 (708)
..+|..|.+++.+ -+.++|.. |.. .+|..+.+++|.-.....-.. .=+.|+++.+.+..++. .|. +-.
T Consensus 181 ~~~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f~~l~~~~~s~~~~~~i~~~~~-~kptl~t~~v~~s~~~~-~~~-l~p 257 (490)
T KOG1259|consen 181 CTQLVALVVTPVKDPIDRSNIIPNRLSFNLNAFRNLKTLKFSALSTENIVDIEL-LKPTLQTICVHNTTIQD-VPS-LLP 257 (490)
T ss_pred hhheeEEEecCCCCCCccccccccccccchHHhhhhheeeeeccchhheeceee-cCchhheeeeecccccc-ccc-ccc
Confidence 4567888887653 11222222 222 578888888876443221111 22788999998887773 222 222
Q ss_pred CCCCcEEEccCC-ccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 039322 96 CSSLIRVRLNSN-NLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQAL 174 (708)
Q Consensus 96 l~~L~~L~l~~n-~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 174 (708)
...+..+.-+.- -.+|.........+-|++||||+|.|+.+ .....-+|.++.|++++|.|..+ ..++.+++|+.|
T Consensus 258 e~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~~i-DESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~L 334 (490)
T KOG1259|consen 258 ETILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLITQI-DESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLL 334 (490)
T ss_pred hhhhcCccCCCCCccCCceEEecchHhhhhhccccccchhhh-hhhhhhccceeEEeccccceeee--hhhhhcccceEe
Confidence 233333322222 12333344455667899999999999854 45667789999999999999844 348999999999
Q ss_pred ecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCC-CCCCccccceeecccCccc
Q 039322 175 DLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVP-ENLGNLLKLHYLGLSNNQF 253 (708)
Q Consensus 175 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l 253 (708)
||++|.++ ....+-..+.|+++|.|++|.|... ..+..+.+|..||+++|+|..... ..++++|.|+.|.|.+|.+
T Consensus 335 DLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 335 DLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred ecccchhH-hhhhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 99999998 4555556788999999999999832 246778899999999999985433 4689999999999999999
Q ss_pred ccC
Q 039322 254 VLE 256 (708)
Q Consensus 254 ~~~ 256 (708)
.+.
T Consensus 412 ~~~ 414 (490)
T KOG1259|consen 412 AGS 414 (490)
T ss_pred ccc
Confidence 844
No 470
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.29 E-value=4.1e-13 Score=133.82 Aligned_cols=208 Identities=20% Similarity=0.190 Sum_probs=139.7
Q ss_pred CCCCccEEeccCCccccccC-ccCcCCCCCcEEEccCCcccc--ccccccCCCCCCCEEEcccCcceeeCCCC-CCCCCC
Q 039322 71 RGGALQYFGVSENHFQGTIP-KILRNCSSLIRVRLNSNNLTG--NISEALGIYPNLTFIDLSRNDFYGEISSN-WGKCPK 146 (708)
Q Consensus 71 ~l~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~i~~--~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~ 146 (708)
++.+|+...|.++.+..... .....|++++.|||+.|-+.. ........+|+|+.|+|+.|++....... -..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 45678888888877763322 346678888888888888763 33445677888999999998885332222 235678
Q ss_pred CCEEEcccCccccc-CCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCC--cccCCCCCCCeEe
Q 039322 147 LGTLNVSMNNITGG-IPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLP--PEIGSLVDLEYLD 223 (708)
Q Consensus 147 L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~~~L~~L~ 223 (708)
|+.|.|++|.++.- +......+|+|+.|+|..|..-.........+..|++|+|++|++. ..+ .....++.|+.|+
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhh
Confidence 88899999988732 2223455688999999998532233333445678899999998887 333 3456788888899
Q ss_pred ccCCcccccCCCC------CCccccceeecccCcccccC-CChhhhhhcccchhhcccccCCC
Q 039322 224 LSANRFNNSVPEN------LGNLLKLHYLGLSNNQFVLE-LPKELEKLVQLSELDASHNLFGG 279 (708)
Q Consensus 224 l~~N~i~~~~~~~------~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~ls~N~i~~ 279 (708)
++.+.|....... ...+++|++|+++.|+|... .-..+..+++|+.|....|.+..
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 9998887532222 24567788888888887522 22345556667777777777663
No 471
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.28 E-value=6.4e-11 Score=110.73 Aligned_cols=141 Identities=21% Similarity=0.234 Sum_probs=100.9
Q ss_pred cceeccccCccEEEEEeCC-------CcEEEEEEcCCCCCc---------ch---------hHhHHHH----HHHHHHHH
Q 039322 441 QYCIGNGGHGSVYRAELPS-------GQVVAIKKFHSPLPC---------DQ---------IADQKEF----LIEVKALT 491 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~-------~~~vavK~~~~~~~~---------~~---------~~~~~~~----~~e~~~l~ 491 (708)
...||.|.-+.||.|...+ +..+|||+.+..... .+ ....+.+ .+|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999996543 478999998753210 00 0112233 38999999
Q ss_pred hccC--CceeeEEEEEeeCCeeEEEEEeccCCCHHH-HhcccccccCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEEcc
Q 039322 492 EIRH--RNIVKFYGFCSHARHSFLVYELLERGSLAA-ILSSDTAAQELGWSQRMNVIKGVADALSYL-HHDCFPPIVHQD 567 (708)
Q Consensus 492 ~l~h--~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~ivH~d 567 (708)
++.. -+++.++++ ...++||||+.++.+.. .++. ..++.++...+..+++.++..+ |+. |+||||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 9953 466777764 45679999997754322 2221 1244556778889999999998 788 999999
Q ss_pred CCCCCeeeCCCCcEEEeecccccccC
Q 039322 568 ISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 568 lk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
+++.||+++ ++.+.++|||.|...+
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeCC
Confidence 999999997 5789999999987554
No 472
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.28 E-value=1.7e-11 Score=114.70 Aligned_cols=131 Identities=19% Similarity=0.162 Sum_probs=96.1
Q ss_pred cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCce-eeEEEEEeeCCeeEEEEEecc
Q 039322 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI-VKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~l~~~~~~~~~~~lv~e~~~ 519 (708)
.+.++.|..+.||+++.. ++.|++|....... ....+..|+++++.+.+.++ ++++++. ....++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecC
Confidence 356899999999999875 77899999765321 12345678888888865444 4455443 234579999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC--FPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
|.++.+. . .....++.+++++++.||+.. ..+++|||++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~----~-------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE----D-------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc----c-------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9877643 0 112345678999999999982 11259999999999999 67899999999863
No 473
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.26 E-value=4.6e-11 Score=126.44 Aligned_cols=168 Identities=19% Similarity=0.257 Sum_probs=127.7
Q ss_pred EeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccC
Q 039322 456 ELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQE 535 (708)
Q Consensus 456 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~ 535 (708)
+..++.+|.|.+.+.... ...+...+.++.++.++||+|++++..++.+++.|+|+|-+. .|..+++.
T Consensus 33 ~k~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------ 100 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------ 100 (690)
T ss_pred eeccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------
Confidence 444688888888765321 334556778888999999999999999999999999999883 67777754
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccCccccc
Q 039322 536 LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615 (708)
Q Consensus 536 l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~ 615 (708)
++......-+.||+.||.|||+.+ +++|++|....|++++.|+.||++|.++......+.......--..|..|+.+.
T Consensus 101 l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 101 LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEID 178 (690)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcC
Confidence 345667778999999999999775 999999999999999999999999998865443222111112223456666543
Q ss_pred cCCCCcchhHHHHHHHHHHHHhCC
Q 039322 616 TMKITEKCDVYSFGVLVLEAIKGK 639 (708)
Q Consensus 616 ~~~~~~~~DvwslG~~l~elltg~ 639 (708)
... -..|.|.|||+++|++.|.
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCcc
Confidence 322 3469999999999999983
No 474
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.26 E-value=5.8e-13 Score=142.82 Aligned_cols=195 Identities=30% Similarity=0.293 Sum_probs=88.2
Q ss_pred CCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEE
Q 039322 72 GGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLN 151 (708)
Q Consensus 72 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (708)
+..++.+++..|.|. ..-..+..+.+|+.|++.+|+|..+.. .+..+++|++|++++|.|+.+.. +..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhccc-chhhhhcchheeccccccccccc--hhhccchhhhe
Confidence 344555555555555 222334555555556666555553322 14455555555555555544322 33444455555
Q ss_pred cccCcccccCCccccCCCCCCEEecccccccccCC-cccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCccc
Q 039322 152 VSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIP-KELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 152 L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~ 230 (708)
+++|.|+.+ ..+..+.+|+.+++++|++....+ . ...+.+|+.+.+.+|.+... ..+..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccce
Confidence 555555522 334445555555555555553222 1 24444555555555555411 11222333333344555544
Q ss_pred ccCCCCCCccc--cceeecccCcccccCCChhhhhhcccchhhcccccCC
Q 039322 231 NSVPENLGNLL--KLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFG 278 (708)
Q Consensus 231 ~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~ 278 (708)
...+ +..+. +|+.+++++|++. ..+..+..+..+..|++++|++.
T Consensus 222 ~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 222 KLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred eccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccc
Confidence 2211 11111 1444555555444 22233344444444454444443
No 475
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.24 E-value=6.4e-13 Score=142.49 Aligned_cols=244 Identities=26% Similarity=0.236 Sum_probs=174.0
Q ss_pred CCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEc
Q 039322 49 PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDL 128 (708)
Q Consensus 49 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l 128 (708)
..+..+.++.|.+.. .-..++.+.+|..|++..|.|.. +...+..+++|++|+|++|.|+.+. .+..++.|+.|++
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l 147 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNL 147 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhhee
Confidence 345555566666554 33446778889999999999984 3333778899999999999998654 4566777999999
Q ss_pred ccCcceeeCCCCCCCCCCCCEEEcccCcccccCC-ccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccc
Q 039322 129 SRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIP-REIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTG 207 (708)
Q Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 207 (708)
++|.|+.+. .+..+++|+.+++++|++....+ . ...+.+++.+.+.+|.+... ..+..+..+..+++..|.++.
T Consensus 148 ~~N~i~~~~--~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~ 222 (414)
T KOG0531|consen 148 SGNLISDIS--GLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISK 222 (414)
T ss_pred ccCcchhcc--CCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhccccccee
Confidence 999997553 45568899999999999985544 2 57788899999999988732 334455666667899999884
Q ss_pred cCCcccCCCCC--CCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCC---Cc
Q 039322 208 RLPPEIGSLVD--LEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGE---IP 282 (708)
Q Consensus 208 ~~~~~~~~~~~--L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~---~~ 282 (708)
..+ +..+.. |+.+++++|++. ..+..+..+.++..|++.+|++... ..+.....+..+....|.+... ..
T Consensus 223 ~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (414)
T KOG0531|consen 223 LEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQ 297 (414)
T ss_pred ccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhc
Confidence 333 223333 899999999998 4445677788999999999998732 3355566777788888887631 11
Q ss_pred hh-hcCcccCCceecccccccCCCC
Q 039322 283 FQ-ICSLKSLEKLNLSHNNLSGSIP 306 (708)
Q Consensus 283 ~~-~~~~~~L~~L~l~~N~l~~~~~ 306 (708)
.. ....+.+..+.+.+|++....+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 298 EYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred cccccccccccccccccCccccccc
Confidence 11 3445667777777777765444
No 476
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.23 E-value=1.6e-10 Score=103.68 Aligned_cols=134 Identities=20% Similarity=0.341 Sum_probs=103.9
Q ss_pred eeccccCccEEEEEeCCCcEEEEEE-cCCCCCcchhH---hHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEec
Q 039322 443 CIGNGGHGSVYRAELPSGQVVAIKK-FHSPLPCDQIA---DQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELL 518 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~~~~~vavK~-~~~~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~ 518 (708)
.+++|+-+.+|.+.+. |..+++|. +++...-.... ....-.+|++++.+++--.|...+-++.+++...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999774 44455554 23322222221 2456788999999998778877788888888899999999
Q ss_pred cCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 519 ERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 519 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
+|..|.+.+... ...++..+-.-+.-||.. ||+|||+.++||.+..++ +.++|||++.+
T Consensus 82 ~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999888643 245666777778889999 999999999999998665 99999999974
No 477
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.22 E-value=6.6e-12 Score=114.95 Aligned_cols=125 Identities=34% Similarity=0.392 Sum_probs=42.3
Q ss_pred CCCCCCEEEccCccccccCCcccC-CCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhh-hhhcccc
Q 039322 191 KLNSLTELILRGNQFTGRLPPEIG-SLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKEL-EKLVQLS 268 (708)
Q Consensus 191 ~l~~L~~L~l~~n~l~~~~~~~~~-~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~ 268 (708)
+..++++|+|++|+|+. +. .++ .+.+|+.|+|++|.|+.. +.+..+++|+.|++++|+|+.. ...+ ..+++|+
T Consensus 17 n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--
T ss_pred ccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCcc-ccchHHhCCcCC
Confidence 34456777777777763 22 333 456777777777777633 2466677777777777777743 3333 4577777
Q ss_pred hhhcccccCCCC-CchhhcCcccCCceecccccccCCCCC----cccccccccEEecC
Q 039322 269 ELDASHNLFGGE-IPFQICSLKSLEKLNLSHNNLSGSIPN----CFEGIRGISVIDIS 321 (708)
Q Consensus 269 ~L~ls~N~i~~~-~~~~~~~~~~L~~L~l~~N~l~~~~~~----~~~~l~~L~~l~l~ 321 (708)
+|++++|+|.+. .-..+..+++|+.|+|.+|+++.. +. .+..+|+|+.||-.
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETTE
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCCE
Confidence 777777777652 224556677777788888877633 22 23456777766543
No 478
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.19 E-value=9.7e-12 Score=113.85 Aligned_cols=106 Identities=30% Similarity=0.305 Sum_probs=23.3
Q ss_pred CCCCcEEEccCCccccccccccC-CCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccc-cCCCCCCE
Q 039322 96 CSSLIRVRLNSNNLTGNISEALG-IYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREI-GNSSQLQA 173 (708)
Q Consensus 96 l~~L~~L~l~~n~i~~~~~~~~~-~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~ 173 (708)
..++++|+|++|.|+.+. .++ .+.+|+.|||++|+|+.+. .+..+++|+.|++++|+|+... ..+ ..+++|++
T Consensus 18 ~~~~~~L~L~~n~I~~Ie--~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~-~~l~~~lp~L~~ 92 (175)
T PF14580_consen 18 PVKLRELNLRGNQISTIE--NLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSIS-EGLDKNLPNLQE 92 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S-C-HHHHHH-TT--E
T ss_pred cccccccccccccccccc--chhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccc-cchHHhCCcCCE
Confidence 344555555555555331 222 3445555555555554432 2444555555555555555322 122 23455555
Q ss_pred EecccccccccC-CcccCCCCCCCEEEccCcccc
Q 039322 174 LDLSLNHIVGEI-PKELGKLNSLTELILRGNQFT 206 (708)
Q Consensus 174 L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~ 206 (708)
|+|++|+|.... -..+..+++|+.|+|.+|.++
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 555555554211 122334444444444444444
No 479
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.16 E-value=2.6e-11 Score=127.38 Aligned_cols=248 Identities=21% Similarity=0.214 Sum_probs=175.6
Q ss_pred HHhccccccceeccccCccEEEEEe--CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCC
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAEL--PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHAR 509 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~ 509 (708)
.-..+|..+..||.|.|+.|+.... .++..|++|........ ..+...-..|+-+...+ .|.++++.+..+..-+
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~--~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT--FASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccc--hHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3456888899999999999999843 46788999988764322 12223334566665555 4889999888888878
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEeeccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVADFGI 588 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~ 588 (708)
+.|+=-||+++++...... ....++...++++..|++.++.++|+. .++|+|++|+||++..+ +..+++|||.
T Consensus 340 ~~~ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred cccCchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccc
Confidence 8889999999998877662 224477788999999999999999998 99999999999999886 7889999999
Q ss_pred ccccCCCCCcccccccccccc--CccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 039322 589 AKFLKPESSNWTEFAGTYGYV--APELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~y~--aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
+..+.- .........++. +|+......+..+.|+||||.-+.|.++|..--+.. .....+..+.
T Consensus 414 ~t~~~~---~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-----------~~~~~i~~~~ 479 (524)
T KOG0601|consen 414 WTRLAF---SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-----------VQSLTIRSGD 479 (524)
T ss_pred ccccce---ecccccccccccccchhhccccccccccccccccccccccccCcccCccc-----------ccceeeeccc
Confidence 864221 111122233344 555556667888999999999999999876653210 1111112222
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.+...... ..+..+.+.+..++++.||.+.++..+.
T Consensus 480 ~p~~~~~~----~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 480 TPNLPGLK----LQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred ccCCCchH----HhhhhhhhhhcCCccccchhhhhhcccc
Confidence 22111111 3466677789999999999998876653
No 480
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.15 E-value=1.6e-09 Score=108.30 Aligned_cols=255 Identities=19% Similarity=0.260 Sum_probs=159.7
Q ss_pred cccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE-------eeCCe
Q 039322 439 DAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC-------SHARH 510 (708)
Q Consensus 439 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~-------~~~~~ 510 (708)
...+.+|+|+.+.+|-.-. -...+.|+...+-... .. +.+..|... .||-+-.-+.|- .....
T Consensus 14 ~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~----~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAA----QA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecch--hhchhheeecCCCchH----HH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 3466799999999996621 1224567777643221 11 123333433 455433322221 11223
Q ss_pred eEEEEEeccCC-CHHHHhc---ccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 511 SFLVYELLERG-SLAAILS---SDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 511 ~~lv~e~~~~g-~L~~~l~---~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
..+.|..+.+- .+.+++. .++......|+..+++++.+|.+.+.||+. |.+-||+.++|+|+.+++.+.|.|-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcc
Confidence 56788877764 3333332 223344578999999999999999999999 9999999999999999999999986
Q ss_pred ccccccCCCCCccccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhC-CCCCCccccccccccccc--cc
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKG-KHPRDFLSLISSSSLNTD--IA 658 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg-~~p~~~~~~~~~~~~~~~--~~ 658 (708)
+.-... ..+......+|...|++||... +...+...|.|.+|+++++++.| ++||...........-.+ ..
T Consensus 162 Dsfqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia 240 (637)
T COG4248 162 DSFQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA 240 (637)
T ss_pred cceeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh
Confidence 554433 3344456678999999999765 33456689999999999999985 999986543221111111 00
Q ss_pred -----c-ccccCCCCCCC-CchhHHHHHHHHHHHHhccCCC--CCCCCCHHHHHHHh
Q 039322 659 -----L-DEILDPRLPPP-SRSVQEKLISIMEVAFSCLNES--PESRPTMKVVTQQV 706 (708)
Q Consensus 659 -----~-~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~d--P~~RPs~~evl~~l 706 (708)
. .+.-.+..+++ ...+..-..++..+..+|+... |.-|||++.++..|
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl 297 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAAL 297 (637)
T ss_pred cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Confidence 0 01111111111 1122222345666666888743 56899999887654
No 481
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.14 E-value=1e-09 Score=97.88 Aligned_cols=148 Identities=19% Similarity=0.267 Sum_probs=109.9
Q ss_pred ccceeccccCccEEEEEeCCCcEEEEEE-cCCCCCc---chhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 440 AQYCIGNGGHGSVYRAELPSGQVVAIKK-FHSPLPC---DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 440 ~~~~ig~G~~g~vy~~~~~~~~~vavK~-~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
....+-||+-+.|+++.+. |+..+||. +.+...- +..-..++..+|++.+.++.--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 5567899999999999884 77766764 3222111 11123567889999999998667766666777777778999
Q ss_pred EeccC-CCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC---cEEEeecccccc
Q 039322 516 ELLER-GSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY---EAHVADFGIAKF 591 (708)
Q Consensus 516 e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~a~~ 591 (708)
||++| .++.+++....... ...+....++..|-+.+.-||.. +++||||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 47888886544322 22233378899999999999999 999999999999997665 358999999974
Q ss_pred c
Q 039322 592 L 592 (708)
Q Consensus 592 ~ 592 (708)
-
T Consensus 166 s 166 (229)
T KOG3087|consen 166 S 166 (229)
T ss_pred c
Confidence 3
No 482
>PLN03150 hypothetical protein; Provisional
Probab=99.11 E-value=1.2e-10 Score=130.51 Aligned_cols=113 Identities=30% Similarity=0.447 Sum_probs=102.8
Q ss_pred CCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecc
Q 039322 218 DLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLS 297 (708)
Q Consensus 218 ~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~ 297 (708)
.++.|+|++|.+++..|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccccc-ccccEEecCCCcCCCCCC
Q 039322 298 HNNLSGSIPNCFEGI-RGISVIDISDNQLQGPVP 330 (708)
Q Consensus 298 ~N~l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~ 330 (708)
+|++++.+|..+..+ ..+..+++.+|+..|..|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999888764 467789999998766443
No 483
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=7.9e-10 Score=108.43 Aligned_cols=143 Identities=20% Similarity=0.273 Sum_probs=109.6
Q ss_pred ceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC--CceeeEEEEEeeCC---eeEEEEE
Q 039322 442 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH--RNIVKFYGFCSHAR---HSFLVYE 516 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~l~~~~~~~~---~~~lv~e 516 (708)
+.+|.|..+.||++...+|+.+++|........ .....+..|.++++.+++ ..+.+++.+....+ ..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~---~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL---PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC---cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 568999999999998776789999997653211 134567889999999975 34677887776543 6689999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC------------------------------------- 559 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~------------------------------------- 559 (708)
|++|.++.+.+.. ..++..+...++.+++++++.||+..
T Consensus 81 ~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 81 RVDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 9999888775531 23567778888888888888888531
Q ss_pred ----------------CCCeEEccCCCCCeeeCC--CCcEEEeecccccc
Q 039322 560 ----------------FPPIVHQDISSKNLLLDL--EYEAHVADFGIAKF 591 (708)
Q Consensus 560 ----------------~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~a~~ 591 (708)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 146799999999999998 66789999998863
No 484
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.99 E-value=4.4e-10 Score=84.56 Aligned_cols=59 Identities=31% Similarity=0.427 Sum_probs=28.6
Q ss_pred CCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCc
Q 039322 98 SLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNN 156 (708)
Q Consensus 98 ~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 156 (708)
+|++|++++|+|+.+.++.|..+++|++|++++|.++.+.+..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444444444444444444444444444444444444444444444444
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.98 E-value=3.2e-10 Score=129.69 Aligned_cols=132 Identities=17% Similarity=0.216 Sum_probs=99.0
Q ss_pred cCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCC--ccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCc
Q 039322 23 SNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNH--FTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLI 100 (708)
Q Consensus 23 ~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~--~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 100 (708)
......+...+-+|++. .++.....+.|+.|-+..|. +.......|..++.|++|||++|.=.+.+|..+++|-+|+
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred cchhheeEEEEeccchh-hccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 34466788888888875 45666666778888888885 4554555577788888888888776668888888888888
Q ss_pred EEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCc
Q 039322 101 RVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNN 156 (708)
Q Consensus 101 ~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 156 (708)
.|+|+++.|. ..|..+.+++.|.+||+..+.-....++....+++|++|.+..-.
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 8888888888 556678888888888888876554556666678888888877654
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.97 E-value=1.7e-10 Score=131.87 Aligned_cols=270 Identities=19% Similarity=0.209 Sum_probs=170.4
Q ss_pred CcEEECCCCcccccCCccccCCCCCCEEEeeCce--eeeeCCCCCC-CCCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 4 LSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNN--LSGFIPPSLE-NPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 4 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~--i~~~~~~~~~-~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
.+...+-+|++..+... ...++|++|-+.+|. +..+....|. .|.|.+||+++|.-.+.+|..++.+-+|++|++
T Consensus 525 ~rr~s~~~~~~~~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L 602 (889)
T KOG4658|consen 525 VRRMSLMNNKIEHIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDL 602 (889)
T ss_pred eeEEEEeccchhhccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccc
Confidence 45666677777743333 334479999999997 5433333343 489999999998888889999999999999999
Q ss_pred cCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcce--eeCCCCCCCCCCCCEEEcccCccc
Q 039322 81 SENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFY--GEISSNWGKCPKLGTLNVSMNNIT 158 (708)
Q Consensus 81 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~L~~N~i~ 158 (708)
+++.+. .+|..+++++.|.+|++..+.--...+.....+++|++|.+...... ...-..+..+.+|+.+..+.....
T Consensus 603 ~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~ 681 (889)
T KOG4658|consen 603 SDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVL 681 (889)
T ss_pred cCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhH
Confidence 999999 88999999999999999998765556778888999999999876521 222223345555555555443321
Q ss_pred ccCCccccCCCCCC----EEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCC------CCCCCeEeccCCc
Q 039322 159 GGIPREIGNSSQLQ----ALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGS------LVDLEYLDLSANR 228 (708)
Q Consensus 159 ~~~~~~~~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------~~~L~~L~l~~N~ 228 (708)
....+..+..|. .+.+.++... ..+..+..+.+|+.|.+.++.+.......+.. ++++..+.+.++.
T Consensus 682 --~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~ 758 (889)
T KOG4658|consen 682 --LLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCH 758 (889)
T ss_pred --hHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccc
Confidence 111222333332 3333333333 44556777888899988888876333322221 1122222222221
Q ss_pred ccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCC
Q 039322 229 FNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGE 280 (708)
Q Consensus 229 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~ 280 (708)
.- ..+....-.++|+.|.+..++....+......+..++.+-+..+.+.+.
T Consensus 759 ~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 759 ML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred cc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 11 1122222346788888888777666666666666666655666666544
No 487
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.96 E-value=6.7e-10 Score=83.57 Aligned_cols=61 Identities=38% Similarity=0.507 Sum_probs=45.1
Q ss_pred CCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccc
Q 039322 121 PNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHI 181 (708)
Q Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l 181 (708)
|+|++|++++|+++.+.+..|.++++|++|++++|.|+.+.+..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4677777777777777777777777777777777777777777777777777777777764
No 488
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.94 E-value=1.9e-10 Score=126.99 Aligned_cols=251 Identities=21% Similarity=0.245 Sum_probs=168.2
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..+++.+.+.+-+|.++.++-+.- ..|...++|+....-. -.....+....+-.+.-...+|.+++....+.-....+
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~-i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPK-IRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchh-hccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 346677778889999999988843 2344455554433110 00011122222222222234566666655555667789
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
++++|..+++|...++.... .+..-.......+..+.++||.. .+.|+|++|.|.+...++..+++|||.....
T Consensus 881 L~~~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhhHHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 99999999999999876552 34455566677788899999997 6899999999999999999999999843221
Q ss_pred CC---------------------CC----------CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 039322 593 KP---------------------ES----------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641 (708)
Q Consensus 593 ~~---------------------~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p 641 (708)
.. .. .......+|+.|.+||...+......+|.|+.|++++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 10 00 001235689999999999999999999999999999999999999
Q ss_pred CCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHH
Q 039322 642 RDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMK 700 (708)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 700 (708)
|.... ....++.+.....+.+ ...........+++...+..+|.+|-.|.
T Consensus 1035 ~na~t--------pq~~f~ni~~~~~~~p-~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAET--------PQQIFENILNRDIPWP-EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcc--------hhhhhhccccCCCCCC-CCccccChhhhhhhhhhhccCchhccCcc
Confidence 87322 2233333333333322 22223334566777788889999998765
No 489
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.92 E-value=1.4e-08 Score=94.76 Aligned_cols=130 Identities=24% Similarity=0.310 Sum_probs=84.0
Q ss_pred cEEEEEeCCCcEEEEEEcCCCCCc----------------------chhHhHHHHHHHHHHHHhccCC--ceeeEEEEEe
Q 039322 451 SVYRAELPSGQVVAIKKFHSPLPC----------------------DQIADQKEFLIEVKALTEIRHR--NIVKFYGFCS 506 (708)
Q Consensus 451 ~vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~~~~~e~~~l~~l~h~--~iv~l~~~~~ 506 (708)
.||.|...+|..+|+|..+..... ..........+|.+.|.++..- ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 389998888999999998753111 0011234678899999999765 566666553
Q ss_pred eCCeeEEEEEecc--CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHH-HHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 039322 507 HARHSFLVYELLE--RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSY-LHHDCFPPIVHQDISSKNLLLDLEYEAHV 583 (708)
Q Consensus 507 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 583 (708)
..++||||++ |..+..+.... ++......++.+++..+.. +|+. |++|||+.+.||+++++ .+.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 2369999999 54454433221 1123456677778875555 5677 99999999999999987 9999
Q ss_pred eecccccccC
Q 039322 584 ADFGIAKFLK 593 (708)
Q Consensus 584 ~Dfg~a~~~~ 593 (708)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999887543
No 490
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.92 E-value=2.3e-08 Score=99.27 Aligned_cols=144 Identities=20% Similarity=0.149 Sum_probs=101.1
Q ss_pred eeccccCccEEEEEeCCCcEEEEEEcCCCCCcchh-------HhHHHHHHHHHHHHhccCCc--eeeEEEEEee-----C
Q 039322 443 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQI-------ADQKEFLIEVKALTEIRHRN--IVKFYGFCSH-----A 508 (708)
Q Consensus 443 ~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~--iv~l~~~~~~-----~ 508 (708)
.+-+.....|+++.. +|+.|.||........... .....+.+|.+.+.++...+ .+.++++.+. .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 344444445777766 5788999977432100000 01124778999988885433 3455666643 2
Q ss_pred CeeEEEEEeccCC-CHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-------CCc
Q 039322 509 RHSFLVYELLERG-SLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL-------EYE 580 (708)
Q Consensus 509 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-------~~~ 580 (708)
...++|+|++++. +|.+++.... ....+......++.+++..+..||.. ||+|+|++++|||++. ++.
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 3578999999986 8999875321 12345677889999999999999999 9999999999999975 467
Q ss_pred EEEeecccccc
Q 039322 581 AHVADFGIAKF 591 (708)
Q Consensus 581 ~kl~Dfg~a~~ 591 (708)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998864
No 491
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.89 E-value=1.8e-10 Score=109.44 Aligned_cols=207 Identities=19% Similarity=0.114 Sum_probs=110.8
Q ss_pred CCCCcEEEccCCccccccc-ccc-CCCCCCCEEEcccCccee--eCCCCCCCCCCCCEEEcccCcccccCCccccCCCCC
Q 039322 96 CSSLIRVRLNSNNLTGNIS-EAL-GIYPNLTFIDLSRNDFYG--EISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQL 171 (708)
Q Consensus 96 l~~L~~L~l~~n~i~~~~~-~~~-~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 171 (708)
...+.-|.+.++.|..+.. ..| .....++.|||.+|.|+. .+...+.++|.|+.|+|+.|.+.+.+...-....+|
T Consensus 44 ~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl 123 (418)
T KOG2982|consen 44 LRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNL 123 (418)
T ss_pred ccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccce
Confidence 3445556666666653321 122 334677788888887753 223345677888888888888775443322456778
Q ss_pred CEEecccccccccC-CcccCCCCCCCEEEccCccccccCC--cccCC-CCCCCeEeccCCcccccC--CCCCCcccccee
Q 039322 172 QALDLSLNHIVGEI-PKELGKLNSLTELILRGNQFTGRLP--PEIGS-LVDLEYLDLSANRFNNSV--PENLGNLLKLHY 245 (708)
Q Consensus 172 ~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~-~~~L~~L~l~~N~i~~~~--~~~~~~l~~L~~ 245 (708)
++|-|.+..+.-.. ...+..+|.+++|+++.|.+..... +.... -+.+++|+...|...... ...-.-++++..
T Consensus 124 ~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~s 203 (418)
T KOG2982|consen 124 RVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNS 203 (418)
T ss_pred EEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchh
Confidence 88888777766322 2345567777788877774442111 11111 123444444433322100 000122345666
Q ss_pred ecccCcccccCC-ChhhhhhcccchhhcccccCCC-CCchhhcCcccCCceeccccccc
Q 039322 246 LGLSNNQFVLEL-PKELEKLVQLSELDASHNLFGG-EIPFQICSLKSLEKLNLSHNNLS 302 (708)
Q Consensus 246 L~l~~n~l~~~~-~~~~~~l~~L~~L~ls~N~i~~-~~~~~~~~~~~L~~L~l~~N~l~ 302 (708)
+.+..|.|.... ...+..++.+.-|+|+.|+|.+ ..-+++..++.|..|.+++|++.
T Consensus 204 v~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 204 VFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred eeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 666666664332 2234455555566666666654 22344556666666666666665
No 492
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.81 E-value=2.6e-08 Score=95.09 Aligned_cols=139 Identities=22% Similarity=0.189 Sum_probs=99.3
Q ss_pred ccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCc-----------------ch-hHhHHHHHHHHHHHHhccCC--c
Q 039322 438 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPC-----------------DQ-IADQKEFLIEVKALTEIRHR--N 497 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----------------~~-~~~~~~~~~e~~~l~~l~h~--~ 497 (708)
..++..||-|.-+.||.|..++|.++|||.=+....+ .+ ........+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 3456789999999999999999999999975432110 11 11234567899999999755 6
Q ss_pred eeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 039322 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 498 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 577 (708)
+++.+++- ..++||||++|--|...- ++......++..|..-+.-.-.. |+||||+.+-||++++
T Consensus 173 VP~P~~~n----RHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAWN----RHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCccccc----cceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 77777654 447999999986554321 12333444555555555544455 9999999999999999
Q ss_pred CCcEEEeecccccc
Q 039322 578 EYEAHVADFGIAKF 591 (708)
Q Consensus 578 ~~~~kl~Dfg~a~~ 591 (708)
||.+.++||--+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 99999999976653
No 493
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.80 E-value=1.4e-07 Score=97.15 Aligned_cols=170 Identities=18% Similarity=0.240 Sum_probs=127.4
Q ss_pred cCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe----eCCeeEEEEEeccCC-
Q 039322 448 GHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS----HARHSFLVYELLERG- 521 (708)
Q Consensus 448 ~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~~~lv~e~~~~g- 521 (708)
...+.|++. ..||..|++|+++.... .....-..-+++.+++.|+|+|++.++|. .+...++||+|.++.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~----~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRD----QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccc----cCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 345789994 45899999999843211 11112234577899999999999999886 234678999999984
Q ss_pred CHHHHhcccc------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 522 SLAAILSSDT------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 522 ~L~~~l~~~~------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
+|.+...... .....++..+|.++.|++.||.++|+. |+..+-|.+++|+++.+..++|+..|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccce
Confidence 7877653222 223467899999999999999999999 9999999999999999889999988887
Q ss_pred cccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p 641 (708)
.....+.. |-+. --.+-|.=.||.+++.|.||..-
T Consensus 441 Dvl~~d~~--------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 441 DVLQEDPT--------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred eeecCCCC--------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 76654431 0011 12356888999999999998554
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.79 E-value=8.1e-11 Score=124.34 Aligned_cols=183 Identities=23% Similarity=0.184 Sum_probs=112.2
Q ss_pred CCCCCCCCCCCEEEcccCcccccCCccccCC-CCCCEEeccccccc---ccCCc---ccCC---CCCCCEEEccCccccc
Q 039322 138 SSNWGKCPKLGTLNVSMNNITGGIPREIGNS-SQLQALDLSLNHIV---GEIPK---ELGK---LNSLTELILRGNQFTG 207 (708)
Q Consensus 138 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l-~~L~~L~L~~n~l~---~~~~~---~~~~---l~~L~~L~l~~n~l~~ 207 (708)
|-.+..+..|+.|.|.++.|.. ...+..+ ..|++|...+ .+. .++.. .+++ ...|.+.+.++|++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICHN-SLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 4445566788888888888763 2333333 3455554332 221 11111 1221 135777777788777
Q ss_pred cCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcC
Q 039322 208 RLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICS 287 (708)
Q Consensus 208 ~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~ 287 (708)
....++.-++.|+.|+|++|+++... .+..+++|++|||+.|.+....--...++ +|..|.+++|.++.. ..+.+
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrnN~l~tL--~gie~ 252 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRNNALTTL--RGIEN 252 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhh-hheeeeecccHHHhh--hhHHh
Confidence 55666666777888888888877433 67777788888888888773322223333 477788888877643 23556
Q ss_pred cccCCceecccccccCCCC-CcccccccccEEecCCCcCCCCC
Q 039322 288 LKSLEKLNLSHNNLSGSIP-NCFEGIRGISVIDISDNQLQGPV 329 (708)
Q Consensus 288 ~~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~~~~ 329 (708)
+.+|+.||++.|-|.+-.- ..++.+..|+.|+|.||++.|-+
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 7777788888877764211 23456677777888888877653
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.74 E-value=2.4e-07 Score=86.78 Aligned_cols=142 Identities=18% Similarity=0.124 Sum_probs=105.0
Q ss_pred eccccCccEEEEEeCCCcEEEEEEcCCCCCcch--hHhHHHHHHHHHHHHhccC--CceeeEEEEEeeC----CeeEEEE
Q 039322 444 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQ--IADQKEFLIEVKALTEIRH--RNIVKFYGFCSHA----RHSFLVY 515 (708)
Q Consensus 444 ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h--~~iv~l~~~~~~~----~~~~lv~ 515 (708)
-|+||-+.|++.... |+.+-+|.-..-..... ......|.+|...+.++.. -.++++..+.... -..+||+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 578899999998774 55788888652222111 1246789999999999953 2355555222221 2368999
Q ss_pred EeccCC-CHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc--EEEeeccccc
Q 039322 516 ELLERG-SLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE--AHVADFGIAK 590 (708)
Q Consensus 516 e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~a~ 590 (708)
|.+.+- +|.+++..... .+.+......++.+++.+++-||+. |+.|+|+.+.||+++.++. ++++||.-++
T Consensus 105 e~L~g~~~L~~~l~~~~~-~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQHAV-SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcCCc-CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 988753 89998855332 3457788889999999999999999 9999999999999986666 9999998765
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.72 E-value=4.8e-10 Score=118.63 Aligned_cols=179 Identities=24% Similarity=0.206 Sum_probs=105.2
Q ss_pred CccCcCCCCCcEEEccCCccccccccccCCC-CCCCEEEcccC--cce-------eeCCCCCCCCCCCCEEEcccCcccc
Q 039322 90 PKILRNCSSLIRVRLNSNNLTGNISEALGIY-PNLTFIDLSRN--DFY-------GEISSNWGKCPKLGTLNVSMNNITG 159 (708)
Q Consensus 90 ~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~-~~L~~L~l~~n--~l~-------~~~~~~~~~l~~L~~L~L~~N~i~~ 159 (708)
|-.+..+.+|+.|.|.++.|.. ...+..+ .+|++|...+- -+. +.....+.. ..|...+.+.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~W-n~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVW-NKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhh-hhHhhhhcchhhHH-
Confidence 4445556677777777776652 1111111 23454444321 010 011111111 24666777777777
Q ss_pred cCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCc-ccCCCCCCCeEeccCCcccccCCCCCC
Q 039322 160 GIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPP-EIGSLVDLEYLDLSANRFNNSVPENLG 238 (708)
Q Consensus 160 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~~~~L~~L~l~~N~i~~~~~~~~~ 238 (708)
....++.-++.|+.|+|++|+++... .+..+++|++|||++|.+. .+|. ....+ +|..|.|++|.++.. ..+.
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhh-hheeeeecccHHHhh--hhHH
Confidence 45566777777888888888777432 5667777888888888777 4443 22233 377777777777632 2356
Q ss_pred ccccceeecccCcccccC-CChhhhhhcccchhhcccccCC
Q 039322 239 NLLKLHYLGLSNNQFVLE-LPKELEKLVQLSELDASHNLFG 278 (708)
Q Consensus 239 ~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~ls~N~i~ 278 (708)
++.+|+.||+++|-|.+. ....+..+..|+.|+|.+|++-
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 677777778877777643 2234556667777777777775
No 497
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.70 E-value=1.1e-09 Score=102.99 Aligned_cols=231 Identities=21% Similarity=0.219 Sum_probs=136.1
Q ss_pred CCCCcEEEccCCccccc----cccccCCCCCCCEEEcccCccee----------eCCCCCCCCCCCCEEEcccCcccccC
Q 039322 96 CSSLIRVRLNSNNLTGN----ISEALGIYPNLTFIDLSRNDFYG----------EISSNWGKCPKLGTLNVSMNNITGGI 161 (708)
Q Consensus 96 l~~L~~L~l~~n~i~~~----~~~~~~~~~~L~~L~l~~n~l~~----------~~~~~~~~l~~L~~L~L~~N~i~~~~ 161 (708)
+..+..++||+|.|... ..+.+.+-.+|+..++++-.... ....++.++|+|+.++||+|.+....
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 45566666666666522 22334445566666666532211 11223456778888888888777555
Q ss_pred Ccc----ccCCCCCCEEecccccccccCCccc-------------CCCCCCCEEEccCccccccCC----cccCCCCCCC
Q 039322 162 PRE----IGNSSQLQALDLSLNHIVGEIPKEL-------------GKLNSLTELILRGNQFTGRLP----PEIGSLVDLE 220 (708)
Q Consensus 162 ~~~----~~~l~~L~~L~L~~n~l~~~~~~~~-------------~~l~~L~~L~l~~n~l~~~~~----~~~~~~~~L~ 220 (708)
|.. ++..+.|++|.|++|.+......-+ ..-|.|++.+...|++..-.. ..+..-..|+
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk 188 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHENLK 188 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcCce
Confidence 443 3455778888888887752211111 234788888888888872221 1233335788
Q ss_pred eEeccCCcccccCC-----CCCCccccceeecccCcccccCC----ChhhhhhcccchhhcccccCCCCCchhhc-----
Q 039322 221 YLDLSANRFNNSVP-----ENLGNLLKLHYLGLSNNQFVLEL----PKELEKLVQLSELDASHNLFGGEIPFQIC----- 286 (708)
Q Consensus 221 ~L~l~~N~i~~~~~-----~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~ls~N~i~~~~~~~~~----- 286 (708)
.+.+..|.|.-... ..+..+.+|+.|||..|-++... ...++.++.|++|.+..|-++......+.
T Consensus 189 ~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e 268 (388)
T COG5238 189 EVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNE 268 (388)
T ss_pred eEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhh
Confidence 88888888763211 12355678888888888886432 33456677788888888888765443332
Q ss_pred -CcccCCceecccccccCCCCCc-----c--cccccccEEecCCCcCC
Q 039322 287 -SLKSLEKLNLSHNNLSGSIPNC-----F--EGIRGISVIDISDNQLQ 326 (708)
Q Consensus 287 -~~~~L~~L~l~~N~l~~~~~~~-----~--~~l~~L~~l~l~~N~l~ 326 (708)
..|+|..|.+..|...+..-.. | ..+|-|..|.+.+|++.
T Consensus 269 ~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 269 KFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred hcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcch
Confidence 3477788888888665422111 1 13455555555555554
No 498
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.68 E-value=3e-09 Score=101.30 Aligned_cols=207 Identities=17% Similarity=0.071 Sum_probs=110.6
Q ss_pred cCCCCCCEEEeeCceeeeeCCCC-CCC--CCcccccccCCCccCC--CCccccCCCCccEEeccCCccccccCccC-cCC
Q 039322 23 SNLTNLKELVLLYNNLSGFIPPS-LEN--PMLTRPGLDFNHFTSY--LPHNVCRGGALQYFGVSENHFQGTIPKIL-RNC 96 (708)
Q Consensus 23 ~~l~~L~~L~L~~n~i~~~~~~~-~~~--~~l~~l~l~~n~~~~~--~~~~~~~l~~L~~L~l~~n~i~~~~~~~~-~~l 96 (708)
..+.-+..|.+.++.|.++-... |.. ..++.|++.+|.|+.| +..-+..++.|++|+|+.|.+.. ..+++ ..+
T Consensus 42 ~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s-~I~~lp~p~ 120 (418)
T KOG2982|consen 42 SSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSS-DIKSLPLPL 120 (418)
T ss_pred ccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCC-ccccCcccc
Confidence 33444557777777776543221 221 4577888888888765 44555677888888888888873 33344 356
Q ss_pred CCCcEEEccCCccc-cccccccCCCCCCCEEEcccCcceeeC--CCCCCCC-CCCCEEEcccCccccc--CCccccCCCC
Q 039322 97 SSLIRVRLNSNNLT-GNISEALGIYPNLTFIDLSRNDFYGEI--SSNWGKC-PKLGTLNVSMNNITGG--IPREIGNSSQ 170 (708)
Q Consensus 97 ~~L~~L~l~~n~i~-~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~~~l-~~L~~L~L~~N~i~~~--~~~~~~~l~~ 170 (708)
.+|++|.|.+..+. .-....+..+|.++.|++|.|.+.... ....... +.+++|.+..|..... ....-.-+++
T Consensus 121 ~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpn 200 (418)
T KOG2982|consen 121 KNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPN 200 (418)
T ss_pred cceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhccc
Confidence 77888888777665 222334566777788888877543211 1111111 2344444444432210 0111122355
Q ss_pred CCEEecccccccccCC-cccCCCCCCCEEEccCccccccCC-cccCCCCCCCeEeccCCccc
Q 039322 171 LQALDLSLNHIVGEIP-KELGKLNSLTELILRGNQFTGRLP-PEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 171 L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~N~i~ 230 (708)
+..+-+..|.|+.... ..+..+|.+.-|+|+.|+|..... +.+.++++|.-|.+++|.+.
T Consensus 201 v~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 201 VNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred chheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 5556666665553222 223344555556666665552211 23455555555555555554
No 499
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.63 E-value=2.5e-07 Score=99.53 Aligned_cols=145 Identities=21% Similarity=0.234 Sum_probs=97.4
Q ss_pred ceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHh------------------------------------HHHHHH
Q 039322 442 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIAD------------------------------------QKEFLI 485 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~------------------------------------~~~~~~ 485 (708)
+.|+.++-|.||+|++++|+.||||+.+......-..+ .-.+..
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999999999999999887532110000 012444
Q ss_pred HHHHHHhcc-----CCceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHH-HHHHHhCC
Q 039322 486 EVKALTEIR-----HRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADA-LSYLHHDC 559 (708)
Q Consensus 486 e~~~l~~l~-----h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~-l~~Lh~~~ 559 (708)
|..-+.+++ .+.+.-..-|++......++|||++|-.+.+...... ...+. ..++..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~---k~ia~~~~~~f~~q~~~d- 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDR---KELAELLVRAFLRQLLRD- 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCH---HHHHHHHHHHHHHHHHhc-
Confidence 555555553 3444433444445566789999999988888742222 11332 3333334433 2333334
Q ss_pred CCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 560 FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 560 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|++|.|.+|.||+++.+|.+-+.|||+.....+
T Consensus 285 --gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 --GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred --CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 899999999999999999999999999886653
No 500
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.63 E-value=8.9e-09 Score=109.91 Aligned_cols=150 Identities=21% Similarity=0.278 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcc---------ccccccccccCccccc
Q 039322 545 IKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNW---------TEFAGTYGYVAPELAY 615 (708)
Q Consensus 545 ~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---------~~~~~~~~y~aPE~~~ 615 (708)
+.+++.|+.|+|... ++||+.|.|++|.++..+..||+.|+++.....+.... ........|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 344569999999884 99999999999999999999999999987554422211 1123467999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHH-hCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCC
Q 039322 616 TMKITEKCDVYSFGVLVLEAI-KGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPE 694 (708)
Q Consensus 616 ~~~~~~~~DvwslG~~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 694 (708)
+...+.++|+||+|+++|.+. .|+.-+...+......... . ..+-... ....+.+.++.+=+.+++..++.
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~--~---~~~~~~~---~~s~~~p~el~~~l~k~l~~~~~ 254 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR--N---LLNAGAF---GYSNNLPSELRESLKKLLNGDSA 254 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh--c---ccccccc---cccccCcHHHHHHHHHHhcCCcc
Confidence 988889999999999999999 4665554322111000000 0 0000000 00122334577778899999999
Q ss_pred CCCCHHHHHH
Q 039322 695 SRPTMKVVTQ 704 (708)
Q Consensus 695 ~RPs~~evl~ 704 (708)
.||++.++..
T Consensus 255 ~rp~~~~l~~ 264 (700)
T KOG2137|consen 255 VRPTLDLLLS 264 (700)
T ss_pred cCcchhhhhc
Confidence 9998877654
Done!