Query 039322
Match_columns 708
No_of_seqs 549 out of 5473
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 14:21:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039322.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039322hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-53 3.9E-58 433.3 18.0 254 436-707 13-285 (299)
2 4gt4_A Tyrosine-protein kinase 100.0 2.1E-53 7.2E-58 433.2 19.6 255 436-707 26-302 (308)
3 4aoj_A High affinity nerve gro 100.0 5.4E-53 1.8E-57 434.4 21.2 254 436-707 41-315 (329)
4 4b9d_A Serine/threonine-protei 100.0 2.3E-53 7.8E-58 436.5 17.4 255 436-707 24-279 (350)
5 3omv_A RAF proto-oncogene seri 100.0 1.3E-52 4.5E-57 425.1 20.8 256 436-707 36-296 (307)
6 4fih_A Serine/threonine-protei 100.0 4.4E-53 1.5E-57 433.7 16.9 253 436-708 74-327 (346)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.4E-52 8.1E-57 421.8 14.5 249 436-703 32-283 (311)
8 4fie_A Serine/threonine-protei 100.0 8.3E-52 2.8E-56 434.8 18.2 252 436-707 151-403 (423)
9 3hyh_A Carbon catabolite-derep 100.0 2E-51 7E-56 409.5 19.2 251 436-707 13-265 (275)
10 3fpq_A Serine/threonine-protei 100.0 4.7E-51 1.6E-55 410.7 19.7 251 438-708 28-286 (290)
11 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-51 3.6E-56 422.3 14.4 249 435-707 57-312 (336)
12 3ubd_A Ribosomal protein S6 ki 100.0 9.8E-52 3.4E-56 417.6 12.3 252 436-707 24-284 (304)
13 4ase_A Vascular endothelial gr 100.0 9.3E-51 3.2E-55 421.0 18.1 263 429-707 57-343 (353)
14 3hmm_A TGF-beta receptor type- 100.0 5.5E-50 1.9E-54 409.4 19.7 262 436-707 3-293 (303)
15 4g31_A Eukaryotic translation 100.0 1.4E-49 4.6E-54 404.2 18.2 253 436-707 5-282 (299)
16 4b99_A Mitogen-activated prote 100.0 9E-47 3.1E-51 398.1 18.9 263 436-707 54-347 (398)
17 3rgz_A Protein brassinosteroid 100.0 4.1E-46 1.4E-50 432.0 25.0 359 2-362 294-751 (768)
18 4f9c_A Cell division cycle 7-r 100.0 4.9E-46 1.7E-50 388.5 18.4 201 428-643 13-248 (361)
19 3uto_A Twitchin; kinase, muscl 100.0 1.2E-45 4.2E-50 409.1 20.9 256 435-708 156-414 (573)
20 3v5w_A G-protein coupled recep 100.0 3.2E-45 1.1E-49 401.5 17.7 255 435-707 188-452 (689)
21 3uim_A Brassinosteroid insensi 100.0 7.3E-44 2.5E-48 371.3 19.9 279 424-707 18-307 (326)
22 3fxz_A Serine/threonine-protei 100.0 1E-43 3.5E-48 364.4 18.6 253 435-707 19-272 (297)
23 3p86_A Serine/threonine-protei 100.0 8.1E-44 2.8E-48 367.0 17.2 260 430-707 31-294 (309)
24 2qkw_B Protein kinase; three-h 100.0 3E-43 1E-47 365.6 21.0 271 428-707 31-311 (321)
25 2c30_A Serine/threonine-protei 100.0 5.1E-43 1.8E-47 363.3 21.3 264 424-707 23-297 (321)
26 3fe3_A MAP/microtubule affinit 100.0 4.3E-43 1.5E-47 364.0 20.3 253 435-708 14-268 (328)
27 3rgz_A Protein brassinosteroid 100.0 1.1E-42 3.8E-47 403.2 24.5 348 1-348 268-716 (768)
28 3soa_A Calcium/calmodulin-depe 100.0 1.1E-42 3.9E-47 374.7 21.9 259 434-708 9-271 (444)
29 2yab_A Death-associated protei 100.0 9.5E-43 3.2E-47 365.7 20.8 259 435-708 11-276 (361)
30 1tki_A Titin; serine kinase, m 100.0 6E-43 2.1E-47 362.4 18.9 254 435-707 4-260 (321)
31 3s95_A LIMK-1, LIM domain kina 100.0 4.1E-42 1.4E-46 355.3 25.0 254 435-707 9-278 (310)
32 3zgw_A Maternal embryonic leuc 100.0 4.7E-43 1.6E-47 365.6 17.8 252 435-707 9-263 (347)
33 2nru_A Interleukin-1 receptor- 100.0 7.3E-42 2.5E-46 353.0 26.3 276 424-707 13-302 (307)
34 2psq_A Fibroblast growth facto 100.0 2.9E-42 9.7E-47 364.6 23.6 256 435-707 80-360 (370)
35 1o6l_A RAC-beta serine/threoni 100.0 1.5E-42 5.1E-47 360.9 20.6 254 435-707 4-263 (337)
36 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-41 4.5E-46 385.4 27.4 351 2-353 32-562 (606)
37 2y0a_A Death-associated protei 100.0 3.5E-42 1.2E-46 357.8 19.7 259 435-708 10-275 (326)
38 3c0i_A Peripheral plasma membr 100.0 2E-42 6.8E-47 363.4 17.9 261 435-707 23-289 (351)
39 3niz_A Rhodanese family protei 100.0 7.4E-42 2.5E-46 353.0 21.6 265 435-707 20-303 (311)
40 2bdw_A Hypothetical protein K1 100.0 3.3E-42 1.1E-46 362.7 19.4 257 434-707 27-287 (362)
41 3j0a_A TOLL-like receptor 5; m 100.0 2.7E-41 9.2E-46 395.7 29.1 349 2-354 48-565 (844)
42 3kul_A Ephrin type-A receptor 100.0 5.7E-42 2E-46 356.1 20.9 254 435-707 48-309 (325)
43 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-42 3.8E-47 364.3 15.5 254 435-707 22-283 (353)
44 4dc2_A Protein kinase C IOTA t 100.0 3.1E-42 1.1E-46 364.9 18.8 262 435-707 51-321 (396)
45 3a62_A Ribosomal protein S6 ki 100.0 4.8E-42 1.6E-46 357.0 19.7 255 435-707 16-279 (327)
46 3t6q_A CD180 antigen; protein- 100.0 2.6E-41 8.9E-46 382.9 27.2 351 1-353 152-564 (606)
47 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.5E-42 2.2E-46 346.0 19.6 252 435-707 7-260 (268)
48 4hcu_A Tyrosine-protein kinase 100.0 4.4E-42 1.5E-46 347.4 18.4 251 436-707 10-262 (269)
49 4euu_A Serine/threonine-protei 100.0 1.8E-41 6E-46 352.0 23.2 264 436-706 9-304 (319)
50 3soc_A Activin receptor type-2 100.0 5.5E-42 1.9E-46 356.0 18.6 263 435-707 23-314 (322)
51 4eqm_A Protein kinase; transfe 100.0 4.3E-42 1.5E-46 351.9 17.5 258 435-707 10-271 (294)
52 3kn6_A Ribosomal protein S6 ki 100.0 4.5E-42 1.5E-46 356.7 17.9 254 441-708 16-274 (325)
53 3qd2_B Eukaryotic translation 100.0 1E-41 3.5E-46 356.0 20.5 254 435-707 5-328 (332)
54 1kob_A Twitchin; kinase, intra 100.0 1.1E-41 3.6E-46 360.9 20.6 256 435-708 50-308 (387)
55 3q4u_A Activin receptor type-1 100.0 7.6E-42 2.6E-46 351.8 18.9 254 435-707 7-298 (301)
56 3a8x_A Protein kinase C IOTA t 100.0 1E-41 3.5E-46 356.3 20.0 261 436-707 9-278 (345)
57 3cbl_A C-FES, proto-oncogene t 100.0 4.9E-42 1.7E-46 364.1 17.8 253 435-707 113-370 (377)
58 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.6E-42 1.6E-46 356.8 17.2 252 435-707 8-261 (336)
59 1xjd_A Protein kinase C, theta 100.0 4.1E-42 1.4E-46 358.5 16.0 256 433-707 14-272 (345)
60 2qol_A Ephrin receptor; recept 100.0 9.3E-42 3.2E-46 360.8 18.7 253 435-707 44-305 (373)
61 2zv2_A Calcium/calmodulin-depe 100.0 8.3E-42 2.8E-46 350.9 17.6 256 435-707 12-295 (298)
62 3tki_A Serine/threonine-protei 100.0 9.3E-42 3.2E-46 354.0 18.0 256 435-708 6-265 (323)
63 1fot_A TPK1 delta, CAMP-depend 100.0 1.6E-41 5.6E-46 350.5 19.6 251 435-707 5-261 (318)
64 3dtc_A Mitogen-activated prote 100.0 9.3E-42 3.2E-46 345.5 17.0 255 435-707 6-269 (271)
65 1ob3_A PFPK5, cell division co 100.0 6E-42 2.1E-46 350.0 15.6 264 436-707 2-283 (288)
66 2w4o_A Calcium/calmodulin-depe 100.0 1.3E-41 4.3E-46 356.8 18.3 254 435-708 52-309 (349)
67 3gen_A Tyrosine-protein kinase 100.0 1.6E-41 5.6E-46 346.0 18.6 252 435-707 23-276 (283)
68 3lb7_A RAF proto-oncogene seri 100.0 3.3E-41 1.1E-45 347.4 20.8 257 435-707 35-296 (307)
69 2x4f_A Myosin light chain kina 100.0 1.6E-41 5.4E-46 358.8 18.8 251 439-707 92-345 (373)
70 3l9p_A Anaplastic lymphoma kin 100.0 1.8E-41 6E-46 358.3 19.0 256 435-707 70-341 (367)
71 3tt0_A Basic fibroblast growth 100.0 4.5E-41 1.5E-45 357.6 21.9 256 435-707 68-348 (382)
72 3o0g_A Cell division protein k 100.0 4.6E-41 1.6E-45 344.2 21.1 264 436-707 2-285 (292)
73 3v47_A TOLL-like receptor 5B a 100.0 2.8E-41 9.5E-46 368.9 20.6 352 2-353 30-412 (455)
74 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.4E-41 8.3E-46 353.9 19.1 250 436-707 41-296 (350)
75 1luf_A Muscle-specific tyrosin 100.0 2.2E-41 7.4E-46 355.3 18.9 259 432-707 43-331 (343)
76 2i0e_A Protein kinase C-beta I 100.0 1.3E-41 4.5E-46 355.9 17.0 254 435-707 19-279 (353)
77 3vhe_A Vascular endothelial gr 100.0 1.1E-41 3.8E-46 359.9 16.6 264 428-707 14-351 (359)
78 4fr4_A YANK1, serine/threonine 100.0 3.3E-41 1.1E-45 355.8 19.9 256 435-707 14-274 (384)
79 3ugc_A Tyrosine-protein kinase 100.0 1.7E-41 6E-46 348.0 17.2 261 435-707 9-287 (295)
80 2a2a_A Death-associated protei 100.0 4E-41 1.4E-45 349.6 20.0 259 435-708 11-276 (321)
81 3cok_A Serine/threonine-protei 100.0 3.5E-41 1.2E-45 342.6 19.2 255 435-707 10-265 (278)
82 3v8s_A RHO-associated protein 100.0 1.7E-42 5.7E-47 369.1 9.6 258 430-707 63-332 (410)
83 2qr7_A Ribosomal protein S6 ki 100.0 6.5E-42 2.2E-46 357.3 13.6 255 434-707 20-280 (342)
84 2ivs_A Proto-oncogene tyrosine 100.0 6.3E-41 2.2E-45 347.2 20.5 256 435-707 22-307 (314)
85 2y94_A 5'-AMP-activated protei 100.0 5.3E-41 1.8E-45 363.9 20.2 252 436-707 16-269 (476)
86 3kk8_A Calcium/calmodulin depe 100.0 5E-41 1.7E-45 342.6 18.9 256 435-707 5-264 (284)
87 3hko_A Calcium/calmodulin-depe 100.0 1.4E-41 5E-46 356.9 15.3 266 431-707 21-333 (345)
88 3f3z_A Calcium/calmodulin-depe 100.0 4.1E-41 1.4E-45 341.9 17.8 253 435-707 8-264 (277)
89 1p4o_A Insulin-like growth fac 100.0 2.5E-41 8.4E-46 351.5 16.3 262 429-707 18-295 (322)
90 3gni_B Strad alpha; kinase fol 100.0 8.9E-41 3.1E-45 356.6 20.8 267 435-707 24-336 (389)
91 1mp8_A Focal adhesion kinase 1 100.0 9.4E-41 3.2E-45 339.9 19.6 253 435-707 14-272 (281)
92 2r5t_A Serine/threonine-protei 100.0 3.7E-41 1.3E-45 355.0 17.1 253 435-706 37-295 (373)
93 1rjb_A FL cytokine receptor; k 100.0 5.3E-41 1.8E-45 352.4 18.2 257 434-707 43-330 (344)
94 2pmi_A Negative RE, cyclin-dep 100.0 2.7E-41 9.1E-46 350.0 15.6 266 435-707 4-296 (317)
95 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-40 4.5E-45 343.8 20.8 250 436-708 57-308 (311)
96 2i1m_A Macrophage colony-stimu 100.0 2.4E-41 8.1E-46 353.4 15.1 259 433-707 43-322 (333)
97 1qcf_A Haematopoetic cell kina 100.0 3.2E-41 1.1E-45 366.7 16.8 252 434-707 186-440 (454)
98 4ejn_A RAC-alpha serine/threon 100.0 2.1E-41 7E-46 367.8 15.1 254 435-707 147-407 (446)
99 2eue_A Carbon catabolite derep 100.0 6.5E-41 2.2E-45 340.0 17.7 251 436-707 13-265 (275)
100 1k9a_A Carboxyl-terminal SRC k 100.0 1.4E-40 4.6E-45 361.1 21.4 249 434-707 191-441 (450)
101 3ork_A Serine/threonine protei 100.0 1E-41 3.5E-46 352.4 11.9 256 435-705 11-274 (311)
102 2eva_A TAK1 kinase - TAB1 chim 100.0 1.2E-40 4.3E-45 343.3 19.9 251 436-707 8-259 (307)
103 4agu_A Cyclin-dependent kinase 100.0 7.6E-41 2.6E-45 346.0 18.4 264 436-707 3-287 (311)
104 2y7j_A Phosphorylase B kinase 100.0 1.9E-40 6.4E-45 350.2 21.7 266 427-707 85-362 (365)
105 3fdn_A Serine/threonine-protei 100.0 5.7E-41 2E-45 341.2 17.1 253 434-707 7-260 (279)
106 2rku_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45 341.1 20.1 254 435-707 14-268 (294)
107 1ziw_A TOLL-like receptor 3; i 100.0 1.4E-39 4.6E-44 373.9 30.7 350 4-353 250-626 (680)
108 2izr_A Casein kinase I isoform 100.0 2.2E-41 7.5E-46 353.0 14.3 255 435-707 8-277 (330)
109 1t46_A HOMO sapiens V-KIT hard 100.0 5.3E-41 1.8E-45 347.6 17.0 257 435-707 22-303 (313)
110 3poz_A Epidermal growth factor 100.0 8.9E-41 3.1E-45 347.7 18.6 252 436-707 15-274 (327)
111 2id5_A Lingo-1, leucine rich r 100.0 2.6E-40 8.8E-45 363.3 23.2 348 5-355 14-362 (477)
112 2w5a_A Serine/threonine-protei 100.0 4E-41 1.4E-45 342.4 15.4 258 435-708 5-271 (279)
113 3uc3_A Serine/threonine-protei 100.0 6.3E-41 2.1E-45 353.0 17.3 255 435-707 19-277 (361)
114 1nxk_A MAP kinase-activated pr 100.0 9.5E-41 3.3E-45 356.3 19.0 254 436-707 61-324 (400)
115 3t9t_A Tyrosine-protein kinase 100.0 7.9E-41 2.7E-45 337.9 17.3 251 436-707 8-260 (267)
116 1opk_A P150, C-ABL, proto-onco 100.0 9.4E-41 3.2E-45 366.4 19.3 252 435-707 219-474 (495)
117 2pvf_A Fibroblast growth facto 100.0 2E-40 6.9E-45 346.3 20.8 256 435-707 34-314 (334)
118 4aw2_A Serine/threonine-protei 100.0 3.5E-41 1.2E-45 361.6 15.3 263 428-707 66-341 (437)
119 3kfa_A Tyrosine-protein kinase 100.0 5.5E-41 1.9E-45 343.1 16.1 255 433-707 10-267 (288)
120 3bhy_A Death-associated protei 100.0 1.2E-40 4.1E-45 339.6 18.4 258 435-707 4-268 (283)
121 3dls_A PAS domain-containing s 100.0 1.7E-40 5.8E-45 346.2 19.7 250 434-708 22-278 (335)
122 3qup_A Tyrosine-protein kinase 100.0 1.1E-40 3.9E-45 346.7 18.3 258 434-707 21-294 (323)
123 3dbq_A Dual specificity protei 100.0 1.1E-40 3.9E-45 349.3 18.4 254 435-707 8-276 (343)
124 1u5q_A Serine/threonine protei 100.0 8E-41 2.7E-45 350.2 17.2 251 435-707 53-308 (348)
125 4f0f_A Serine/threonine-protei 100.0 2E-40 6.9E-45 338.7 19.7 254 436-707 19-285 (287)
126 3llt_A Serine/threonine kinase 100.0 9.9E-41 3.4E-45 352.6 17.9 269 427-708 26-359 (360)
127 3v47_A TOLL-like receptor 5B a 100.0 3E-40 1E-44 360.7 22.0 342 5-350 13-385 (455)
128 2zmd_A Dual specificity protei 100.0 1.8E-40 6.2E-45 353.2 19.6 253 436-707 56-323 (390)
129 3mdy_A Bone morphogenetic prot 100.0 4.8E-40 1.6E-44 344.2 22.5 262 431-707 32-327 (337)
130 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 9.8E-41 3.4E-45 362.4 17.6 252 434-707 182-436 (452)
131 2owb_A Serine/threonine-protei 100.0 1.8E-40 6E-45 346.7 18.7 254 435-707 40-294 (335)
132 2vd5_A DMPK protein; serine/th 100.0 2.9E-41 9.8E-46 359.7 12.8 262 428-707 53-330 (412)
133 2wqm_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 341.3 20.0 261 435-707 31-293 (310)
134 3a7i_A MST3 kinase, serine/thr 100.0 3E-40 1E-44 340.2 19.7 251 436-707 22-273 (303)
135 3nyv_A Calmodulin-domain prote 100.0 9.8E-41 3.4E-45 366.8 16.7 256 435-707 25-284 (484)
136 3kmu_A ILK, integrin-linked ki 100.0 1.7E-40 5.8E-45 336.2 17.1 251 435-707 9-266 (271)
137 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.4E-40 8.2E-45 362.5 19.6 260 436-707 185-451 (543)
138 2ac3_A MAP kinase-interacting 100.0 1.5E-40 5E-45 344.7 16.9 263 436-708 12-299 (316)
139 3i6u_A CDS1, serine/threonine- 100.0 1.4E-40 4.8E-45 357.5 17.0 260 434-708 133-403 (419)
140 3gxj_A TGF-beta receptor type- 100.0 7E-42 2.4E-46 352.4 6.6 255 435-707 2-293 (303)
141 1u59_A Tyrosine-protein kinase 100.0 6.6E-40 2.2E-44 334.8 21.1 252 436-707 9-268 (287)
142 3is5_A Calcium-dependent prote 100.0 2.5E-40 8.6E-45 337.4 17.7 256 435-707 21-281 (285)
143 1mqb_A Ephrin type-A receptor 100.0 5.7E-40 1.9E-44 342.4 20.7 253 436-707 44-305 (333)
144 2jam_A Calcium/calmodulin-depe 100.0 2.1E-40 7.3E-45 341.4 17.3 253 435-707 8-264 (304)
145 2yex_A Serine/threonine-protei 100.0 5.9E-40 2E-44 333.2 20.4 257 434-708 5-265 (276)
146 4eut_A Serine/threonine-protei 100.0 2.4E-40 8.2E-45 353.6 18.2 266 435-707 8-305 (396)
147 2z63_A TOLL-like receptor 4, v 100.0 6.6E-40 2.3E-44 368.8 22.7 349 3-353 29-535 (570)
148 3g33_A Cell division protein k 100.0 2.2E-40 7.4E-45 342.0 17.2 269 434-708 7-300 (308)
149 3mtl_A Cell division protein k 100.0 3.8E-41 1.3E-45 349.9 11.6 263 436-707 2-284 (324)
150 2h34_A Serine/threonine-protei 100.0 2E-40 6.9E-45 342.2 16.9 257 435-707 33-292 (309)
151 3lm5_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 345.9 16.1 266 427-707 19-290 (327)
152 1qpc_A LCK kinase; alpha beta 100.0 4.2E-40 1.4E-44 334.8 18.9 253 434-707 11-265 (279)
153 1csn_A Casein kinase-1; phosph 100.0 2.2E-40 7.4E-45 340.4 17.0 256 435-707 9-279 (298)
154 3kex_A Receptor tyrosine-prote 100.0 1.2E-40 4.2E-45 346.4 15.2 252 436-707 13-272 (325)
155 3c1x_A Hepatocyte growth facto 100.0 2.2E-40 7.6E-45 349.8 17.3 253 436-707 89-351 (373)
156 4e5w_A Tyrosine-protein kinase 100.0 2.8E-40 9.5E-45 340.3 17.6 261 436-707 21-298 (302)
157 1x8b_A WEE1HU, WEE1-like prote 100.0 7.6E-40 2.6E-44 334.7 20.6 252 434-708 9-283 (289)
158 3cc6_A Protein tyrosine kinase 100.0 6.7E-40 2.3E-44 333.7 20.0 253 435-707 11-269 (281)
159 3og7_A AKAP9-BRAF fusion prote 100.0 2.9E-40 9.8E-45 337.7 17.2 257 435-707 23-284 (289)
160 3oz6_A Mitogen-activated prote 100.0 2.1E-40 7.2E-45 353.5 16.9 264 434-707 7-331 (388)
161 2acx_A G protein-coupled recep 100.0 7.5E-41 2.6E-45 367.1 13.7 259 435-707 183-447 (576)
162 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.2E-40 4E-45 347.1 14.3 265 433-707 31-321 (329)
163 3q5i_A Protein kinase; CDPK, m 100.0 3.9E-40 1.3E-44 363.3 19.3 258 434-707 34-304 (504)
164 3t6q_A CD180 antigen; protein- 100.0 2.8E-39 9.6E-44 366.3 26.8 346 2-348 33-437 (606)
165 3lij_A Calcium/calmodulin depe 100.0 3.5E-40 1.2E-44 362.8 18.7 255 435-707 36-294 (494)
166 3mwu_A Calmodulin-domain prote 100.0 2.9E-40 9.9E-45 362.8 18.0 255 435-707 21-279 (486)
167 2xir_A Vascular endothelial gr 100.0 4.3E-40 1.5E-44 341.3 18.2 263 429-707 20-306 (316)
168 2vgo_A Serine/threonine-protei 100.0 4.4E-40 1.5E-44 335.6 17.8 252 435-707 13-265 (284)
169 1b6c_B TGF-B superfamily recep 100.0 9.6E-40 3.3E-44 342.6 20.8 260 430-707 36-332 (342)
170 4fvq_A Tyrosine-protein kinase 100.0 2.8E-40 9.7E-45 338.0 16.4 246 435-707 7-271 (289)
171 3lxp_A Non-receptor tyrosine-p 100.0 7.5E-40 2.6E-44 339.4 19.7 257 438-707 33-306 (318)
172 3lxl_A Tyrosine-protein kinase 100.0 5E-40 1.7E-44 342.3 18.2 260 436-707 23-299 (327)
173 4aaa_A Cyclin-dependent kinase 100.0 5.7E-40 2E-44 342.4 18.5 265 435-707 24-309 (331)
174 3ttj_A Mitogen-activated prote 100.0 8.9E-40 3.1E-44 355.1 20.7 262 435-708 61-359 (464)
175 4eco_A Uncharacterized protein 100.0 5.5E-40 1.9E-44 371.9 19.8 345 1-353 205-604 (636)
176 1ua2_A CAK, cell division prot 100.0 2.1E-40 7.3E-45 347.7 15.0 268 434-707 8-294 (346)
177 2clq_A Mitogen-activated prote 100.0 1.3E-39 4.6E-44 334.0 20.5 256 436-707 22-281 (295)
178 3brb_A Proto-oncogene tyrosine 100.0 1.1E-39 3.8E-44 337.6 19.9 258 434-707 32-304 (313)
179 3vq2_A TLR4, TOLL-like recepto 100.0 6.3E-39 2.2E-43 363.4 27.8 331 1-333 55-565 (606)
180 3com_A Serine/threonine-protei 100.0 5.4E-40 1.9E-44 340.1 17.4 254 434-707 27-281 (314)
181 3f66_A Hepatocyte growth facto 100.0 1.4E-39 5E-44 334.2 20.4 254 435-707 24-287 (298)
182 2yfx_A Tyrosine-protein kinase 100.0 8.7E-40 3E-44 340.5 19.0 256 435-707 29-300 (327)
183 1vzo_A Ribosomal protein S6 ki 100.0 4.5E-41 1.5E-45 353.7 9.3 260 435-708 53-325 (355)
184 3op5_A Serine/threonine-protei 100.0 1.6E-40 5.6E-45 351.1 13.6 261 435-707 34-325 (364)
185 1xbb_A Tyrosine-protein kinase 100.0 1.3E-39 4.3E-44 333.4 19.3 253 435-707 15-275 (291)
186 3pfq_A PKC-B, PKC-beta, protei 100.0 8.8E-40 3E-44 370.4 19.7 254 434-706 339-599 (674)
187 2ycf_A Serine/threonine-protei 100.0 6.9E-40 2.4E-44 340.5 17.2 259 434-707 8-277 (322)
188 3lzb_A Epidermal growth factor 100.0 7E-40 2.4E-44 340.6 16.9 252 436-707 15-274 (327)
189 1phk_A Phosphorylase kinase; g 100.0 1.7E-39 5.7E-44 333.8 19.5 258 435-707 16-286 (298)
190 2v62_A Serine/threonine-protei 100.0 4.2E-40 1.4E-44 345.3 15.1 261 436-707 37-324 (345)
191 3mi9_A Cell division protein k 100.0 1.3E-39 4.5E-44 342.7 18.8 265 435-707 16-314 (351)
192 2h6d_A 5'-AMP-activated protei 100.0 7.4E-40 2.5E-44 332.4 16.4 253 435-707 10-264 (276)
193 3pls_A Macrophage-stimulating 100.0 3.5E-39 1.2E-43 331.4 21.5 253 436-707 21-283 (298)
194 1byg_A CSK, protein (C-termina 100.0 1.1E-39 3.6E-44 331.6 17.4 248 435-707 20-269 (278)
195 3q60_A ROP5B; pseudokinase, tr 100.0 8E-40 2.7E-44 346.8 17.1 259 436-707 62-355 (371)
196 1fvr_A Tyrosine-protein kinase 100.0 1.4E-39 4.8E-44 338.9 18.7 254 436-707 25-296 (327)
197 2j7t_A Serine/threonine-protei 100.0 3.4E-40 1.2E-44 339.6 13.9 255 435-707 18-278 (302)
198 1t4h_A Serine/threonine-protei 100.0 2.4E-39 8.3E-44 331.1 19.8 252 436-707 26-285 (290)
199 2x7f_A TRAF2 and NCK-interacti 100.0 2.7E-40 9.3E-45 344.3 12.9 258 431-707 19-289 (326)
200 3rp9_A Mitogen-activated prote 100.0 1.6E-39 5.4E-44 354.5 19.5 194 436-638 53-280 (458)
201 2h8h_A Proto-oncogene tyrosine 100.0 4.2E-40 1.4E-44 364.5 15.0 252 434-707 265-519 (535)
202 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.4E-39 1.2E-43 341.2 21.3 247 434-706 63-334 (365)
203 3n9x_A Phosphotransferase; mal 100.0 2.4E-39 8.2E-44 349.6 20.3 200 435-643 25-253 (432)
204 4hgt_A Casein kinase I isoform 100.0 1.3E-39 4.4E-44 334.3 17.2 257 434-707 7-276 (296)
205 3g2f_A Bone morphogenetic prot 100.0 1.2E-39 4.2E-44 340.9 17.2 261 435-707 12-314 (336)
206 2r3i_A Cell division protein k 100.0 1.1E-39 3.6E-44 335.5 16.4 265 436-707 3-286 (299)
207 2ozo_A Tyrosine-protein kinase 100.0 2.5E-39 8.6E-44 363.3 20.3 251 437-707 336-594 (613)
208 3eqc_A Dual specificity mitoge 100.0 6.6E-40 2.3E-44 346.2 14.7 261 435-707 32-327 (360)
209 1cm8_A Phosphorylated MAP kina 100.0 1.3E-39 4.4E-44 343.8 16.8 260 435-707 24-310 (367)
210 3byv_A Rhoptry kinase; malaria 100.0 2.6E-40 9E-45 351.1 11.5 248 435-707 72-362 (377)
211 3uzp_A CKI-delta, CKID, casein 100.0 2.1E-39 7E-44 332.8 17.5 256 435-707 8-276 (296)
212 2z81_A CD282 antigen, TOLL-lik 100.0 1.4E-39 4.6E-44 364.4 17.6 342 2-353 26-514 (549)
213 2z63_A TOLL-like receptor 4, v 100.0 6.8E-39 2.3E-43 360.5 23.4 351 1-353 51-560 (570)
214 2a19_B Interferon-induced, dou 100.0 2.3E-39 7.8E-44 330.3 17.6 245 434-707 9-270 (284)
215 2wtk_C Serine/threonine-protei 100.0 2.9E-39 1E-43 333.2 18.3 256 435-707 4-266 (305)
216 2id5_A Lingo-1, leucine rich r 100.0 1.3E-38 4.4E-43 349.8 24.5 324 28-353 13-337 (477)
217 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.5E-39 1.9E-43 359.8 21.9 341 2-353 52-514 (562)
218 2xrw_A Mitogen-activated prote 100.0 5.9E-39 2E-43 339.8 21.0 261 435-707 24-321 (371)
219 2w1i_A JAK2; chromosomal rearr 100.0 2.4E-39 8.1E-44 336.9 17.6 261 435-707 40-318 (326)
220 2z7x_B TOLL-like receptor 1, v 100.0 2.2E-39 7.4E-44 360.1 18.1 341 2-353 21-485 (520)
221 3kvw_A DYRK2, dual specificity 100.0 2.8E-39 9.6E-44 348.3 18.3 198 435-645 96-302 (429)
222 1u46_A ACK-1, activated CDC42 100.0 1.9E-39 6.6E-44 332.1 16.2 255 436-707 18-280 (291)
223 1zy4_A Serine/threonine-protei 100.0 2.8E-39 9.5E-44 333.0 17.0 255 434-708 4-287 (303)
224 3ll6_A Cyclin G-associated kin 100.0 5.9E-39 2E-43 335.9 19.6 251 435-707 27-304 (337)
225 2buj_A Serine/threonine-protei 100.0 2.8E-39 9.5E-44 335.3 16.9 257 435-707 28-302 (317)
226 2vwi_A Serine/threonine-protei 100.0 1.3E-39 4.5E-44 335.4 14.3 266 434-707 13-290 (303)
227 2wei_A Calmodulin-domain prote 100.0 3.2E-39 1.1E-43 329.7 16.7 256 434-707 20-279 (287)
228 4fl3_A Tyrosine-protein kinase 100.0 3.7E-39 1.3E-43 362.7 18.8 246 442-707 375-627 (635)
229 3nsz_A CK II alpha, casein kin 100.0 7.5E-39 2.6E-43 334.0 19.4 255 436-707 36-322 (330)
230 2pml_X PFPK7, Ser/Thr protein 100.0 2.5E-39 8.6E-44 340.3 15.8 259 435-707 30-325 (348)
231 3fme_A Dual specificity mitoge 100.0 4.2E-39 1.5E-43 329.4 16.4 257 435-707 6-269 (290)
232 3pg1_A Mitogen-activated prote 100.0 3.2E-39 1.1E-43 341.3 15.4 274 427-707 13-319 (362)
233 2jii_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 343.2 11.4 255 436-707 42-332 (352)
234 2fst_X Mitogen-activated prote 100.0 2.2E-39 7.4E-44 341.7 13.4 260 435-707 28-314 (367)
235 3qyz_A Mitogen-activated prote 100.0 5.6E-39 1.9E-43 339.4 16.5 262 435-707 26-316 (364)
236 4e7w_A Glycogen synthase kinas 100.0 3.8E-39 1.3E-43 343.6 15.3 261 435-707 39-324 (394)
237 4eco_A Uncharacterized protein 100.0 1.1E-38 3.9E-43 361.2 19.9 339 3-347 82-547 (636)
238 3cek_A Dual specificity protei 100.0 1.5E-38 5E-43 329.1 18.9 255 433-707 25-295 (313)
239 1wak_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 341.5 18.7 262 435-708 36-395 (397)
240 3fhr_A MAP kinase-activated pr 100.0 8.6E-39 2.9E-43 333.7 16.6 255 435-707 27-290 (336)
241 1z57_A Dual specificity protei 100.0 3E-38 1E-42 330.8 20.5 260 435-707 13-331 (339)
242 2i6l_A Mitogen-activated prote 100.0 1E-38 3.6E-43 331.4 16.7 261 435-707 10-308 (320)
243 3j0a_A TOLL-like receptor 5; m 100.0 7.6E-38 2.6E-42 366.4 26.0 351 1-352 23-542 (844)
244 3e3p_A Protein kinase, putativ 100.0 7.4E-39 2.5E-43 338.4 15.8 269 429-707 16-317 (360)
245 2b9h_A MAP kinase FUS3, mitoge 100.0 1.2E-38 4E-43 335.9 17.1 262 435-707 10-308 (353)
246 3rgf_A Cyclin-dependent kinase 100.0 2.6E-39 8.8E-44 347.0 12.1 262 435-708 19-337 (405)
247 3eb0_A Putative uncharacterize 100.0 8.8E-39 3E-43 340.2 16.0 262 433-707 4-324 (383)
248 4g8a_A TOLL-like receptor 4; l 100.0 1.2E-37 4.2E-42 355.0 26.4 352 2-353 52-584 (635)
249 1blx_A Cyclin-dependent kinase 100.0 1.7E-38 5.6E-43 330.9 16.9 267 433-707 8-299 (326)
250 3an0_A Dual specificity mitoge 100.0 8.9E-39 3.1E-43 334.8 14.9 258 434-707 49-313 (340)
251 2rio_A Serine/threonine-protei 100.0 2.9E-38 9.9E-43 341.2 19.0 254 436-707 15-298 (434)
252 3o6n_A APL1; leucine-rich repe 100.0 4.6E-38 1.6E-42 335.8 20.4 336 1-355 44-380 (390)
253 4exu_A Mitogen-activated prote 100.0 1.7E-38 5.8E-43 336.3 16.8 259 435-707 41-326 (371)
254 3sv0_A Casein kinase I-like; t 100.0 3.5E-38 1.2E-42 342.4 19.2 256 435-707 6-274 (483)
255 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.7E-39 2.3E-43 332.7 13.0 254 434-707 31-298 (319)
256 2j0j_A Focal adhesion kinase 1 100.0 3.6E-38 1.2E-42 356.0 20.0 255 433-707 387-647 (656)
257 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.5E-38 2.2E-42 351.1 21.6 322 1-332 75-516 (562)
258 2vx3_A Dual specificity tyrosi 100.0 9.9E-38 3.4E-42 332.0 21.5 200 434-644 52-260 (382)
259 3qa8_A MGC80376 protein; kinas 100.0 1.4E-38 4.7E-43 352.2 14.8 264 435-705 13-298 (676)
260 1j1b_A Glycogen synthase kinas 100.0 2.3E-38 7.9E-43 340.4 15.8 259 436-707 54-339 (420)
261 3aln_A Dual specificity mitoge 100.0 2.3E-38 7.9E-43 329.8 15.0 258 436-707 22-288 (327)
262 3p23_A Serine/threonine-protei 100.0 3.5E-38 1.2E-42 339.3 16.7 251 435-707 23-286 (432)
263 4ecn_A Leucine-rich repeat pro 100.0 7.5E-38 2.6E-42 359.9 19.7 340 1-351 447-842 (876)
264 3a99_A Proto-oncogene serine/t 100.0 1.6E-38 5.4E-43 329.6 12.6 249 433-707 40-296 (320)
265 3coi_A Mitogen-activated prote 100.0 7.2E-38 2.5E-42 329.6 17.4 258 436-707 24-308 (353)
266 2eu9_A Dual specificity protei 100.0 1.9E-37 6.4E-42 327.0 20.4 260 435-707 18-336 (355)
267 1q8y_A SR protein kinase; tran 100.0 6.5E-38 2.2E-42 332.9 16.8 260 436-707 19-336 (373)
268 1ziw_A TOLL-like receptor 3; i 100.0 2.6E-36 9E-41 346.5 30.8 347 2-348 222-596 (680)
269 2iwi_A Serine/threonine-protei 100.0 5.9E-38 2E-42 324.5 15.1 252 431-708 26-287 (312)
270 2dyl_A Dual specificity mitoge 100.0 8.1E-38 2.8E-42 324.4 15.6 256 435-707 24-286 (318)
271 3oja_B Anopheles plasmodium-re 100.0 3.4E-37 1.2E-41 347.1 21.1 336 1-355 50-386 (597)
272 4ecn_A Leucine-rich repeat pro 100.0 3.3E-37 1.1E-41 354.6 19.7 338 3-347 324-787 (876)
273 2z7x_B TOLL-like receptor 1, v 100.0 9.8E-37 3.4E-41 338.7 20.8 321 1-331 44-486 (520)
274 3uqc_A Probable conserved tran 100.0 2.2E-36 7.5E-41 307.5 19.1 230 436-707 31-261 (286)
275 3m2w_A MAP kinase-activated pr 100.0 1.9E-36 6.5E-41 310.9 18.5 233 436-707 17-259 (299)
276 3o6n_A APL1; leucine-rich repe 100.0 2.6E-36 8.9E-41 322.3 19.9 313 24-353 43-356 (390)
277 1o6v_A Internalin A; bacterial 100.0 1.2E-35 4E-40 324.7 24.0 326 3-352 47-391 (466)
278 2z81_A CD282 antigen, TOLL-lik 100.0 7.3E-37 2.5E-41 342.2 12.8 321 1-331 49-515 (549)
279 4fmz_A Internalin; leucine ric 100.0 2.8E-35 9.7E-40 309.2 23.6 304 1-326 43-346 (347)
280 2pzi_A Probable serine/threoni 100.0 5.7E-36 1.9E-40 341.8 18.4 234 436-704 80-320 (681)
281 4g8a_A TOLL-like receptor 4; l 100.0 6.5E-35 2.2E-39 332.5 27.0 356 1-356 75-613 (635)
282 3oja_B Anopheles plasmodium-re 100.0 1.2E-35 4.2E-40 334.4 19.8 313 24-353 49-362 (597)
283 3dzo_A Rhoptry kinase domain; 100.0 5.8E-36 2E-40 321.0 13.4 246 435-705 77-364 (413)
284 1o6v_A Internalin A; bacterial 100.0 2.8E-34 9.7E-39 313.7 23.2 302 23-348 43-365 (466)
285 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-34 9.5E-39 299.4 22.0 287 27-323 34-330 (332)
286 2vuw_A Serine/threonine-protei 100.0 4.3E-36 1.5E-40 313.8 7.7 250 435-707 19-334 (336)
287 1ogq_A PGIP-2, polygalacturona 100.0 5.5E-35 1.9E-39 301.5 14.3 257 73-355 50-310 (313)
288 1xku_A Decorin; proteoglycan, 100.0 7.9E-34 2.7E-38 295.8 23.2 290 26-324 31-330 (330)
289 3bz5_A Internalin-J, INLJ; leu 100.0 3.8E-33 1.3E-37 302.3 27.0 299 1-328 41-354 (457)
290 4fmz_A Internalin; leucine ric 100.0 9.8E-34 3.4E-38 297.4 20.6 308 20-348 38-345 (347)
291 1xku_A Decorin; proteoglycan, 100.0 5.3E-33 1.8E-37 289.5 25.7 288 3-300 32-330 (330)
292 1ogq_A PGIP-2, polygalacturona 100.0 2.1E-34 7.2E-39 297.1 14.4 249 49-300 50-302 (313)
293 2ft3_A Biglycan; proteoglycan, 100.0 3.4E-33 1.2E-37 291.2 23.4 287 3-300 34-331 (332)
294 3bz5_A Internalin-J, INLJ; leu 100.0 1.3E-31 4.4E-36 290.3 24.4 308 13-349 29-352 (457)
295 2z66_A Variable lymphocyte rec 100.0 1.1E-31 3.7E-36 276.5 17.6 276 76-355 10-293 (306)
296 1jl5_A Outer protein YOPM; leu 100.0 1.5E-30 5.3E-35 281.6 27.5 262 50-350 132-410 (454)
297 3zyj_A Leucine-rich repeat-con 100.0 9.1E-31 3.1E-35 283.8 20.5 253 74-331 44-297 (440)
298 3zyi_A Leucine-rich repeat-con 100.0 2.2E-30 7.6E-35 281.7 23.3 253 74-331 55-308 (452)
299 2z80_A TOLL-like receptor 2, v 100.0 1.1E-31 3.7E-36 282.3 11.6 258 74-331 53-319 (353)
300 2z80_A TOLL-like receptor 2, v 100.0 3.5E-31 1.2E-35 278.4 15.3 278 73-353 31-318 (353)
301 1jl5_A Outer protein YOPM; leu 100.0 1.9E-29 6.6E-34 273.0 28.7 299 3-350 72-371 (454)
302 2z66_A Variable lymphocyte rec 100.0 5.1E-30 1.7E-34 264.0 21.5 280 5-311 10-296 (306)
303 1ozn_A Reticulon 4 receptor; N 100.0 2.5E-30 8.5E-35 263.3 18.7 251 76-330 14-265 (285)
304 3zyj_A Leucine-rich repeat-con 100.0 5.2E-30 1.8E-34 277.8 22.1 248 51-303 45-293 (440)
305 3zyi_A Leucine-rich repeat-con 100.0 5.1E-30 1.8E-34 278.8 21.2 248 51-303 56-304 (452)
306 1ozn_A Reticulon 4 receptor; N 100.0 7.2E-30 2.5E-34 259.9 19.9 255 52-310 14-269 (285)
307 1z7x_W Ribonuclease inhibitor; 100.0 6.4E-34 2.2E-38 311.1 -12.4 347 2-348 3-410 (461)
308 1z7x_W Ribonuclease inhibitor; 100.0 7E-34 2.4E-38 310.8 -14.7 328 1-328 27-413 (461)
309 3oja_A Leucine-rich immune mol 100.0 1.7E-32 5.9E-37 299.9 -5.5 237 71-321 32-270 (487)
310 3o53_A Protein LRIM1, AGAP0063 100.0 3.3E-30 1.1E-34 266.5 7.0 255 54-322 15-271 (317)
311 3o53_A Protein LRIM1, AGAP0063 100.0 3.9E-30 1.3E-34 265.9 5.3 267 4-307 12-281 (317)
312 4fcg_A Uncharacterized protein 100.0 3.1E-28 1.1E-32 252.4 19.0 219 65-302 96-314 (328)
313 4fcg_A Uncharacterized protein 100.0 2.1E-28 7.3E-33 253.6 17.6 227 97-328 81-316 (328)
314 4azs_A Methyltransferase WBDD; 100.0 3.4E-30 1.2E-34 285.4 3.6 188 444-641 242-437 (569)
315 3g06_A SSPH2 (leucine-rich rep 100.0 9.1E-28 3.1E-32 267.6 22.7 259 4-329 42-300 (622)
316 3oja_A Leucine-rich immune mol 100.0 2.7E-29 9.4E-34 274.5 9.6 246 95-354 32-287 (487)
317 1wwl_A Monocyte differentiatio 100.0 5.7E-30 1.9E-34 264.0 2.5 249 23-302 40-309 (312)
318 3g06_A SSPH2 (leucine-rich rep 100.0 4.3E-27 1.5E-31 262.2 25.8 258 51-351 42-299 (622)
319 1wwl_A Monocyte differentiatio 100.0 6.3E-30 2.2E-34 263.7 1.0 250 69-328 39-311 (312)
320 2z62_A TOLL-like receptor 4, v 99.9 7.3E-27 2.5E-31 236.5 19.3 229 77-333 11-244 (276)
321 2z62_A TOLL-like receptor 4, v 99.9 9.5E-27 3.3E-31 235.6 18.8 221 54-278 12-237 (276)
322 2o6q_A Variable lymphocyte rec 99.9 1.5E-25 5.1E-30 225.8 20.9 201 74-277 17-217 (270)
323 2o6q_A Variable lymphocyte rec 99.9 1.7E-25 5.8E-30 225.5 20.2 206 98-330 17-222 (270)
324 3rfs_A Internalin B, repeat mo 99.9 1.8E-25 6.3E-30 225.4 17.1 207 69-286 37-243 (272)
325 1p9a_G Platelet glycoprotein I 99.9 3E-25 1E-29 225.6 18.3 205 93-328 6-210 (290)
326 1p9a_G Platelet glycoprotein I 99.9 6.3E-25 2.2E-29 223.2 20.6 205 67-278 4-208 (290)
327 3rfs_A Internalin B, repeat mo 99.9 5.2E-25 1.8E-29 222.1 18.1 225 6-266 23-247 (272)
328 3en9_A Glycoprotease, O-sialog 99.9 1.3E-25 4.3E-30 247.5 12.2 187 439-642 339-538 (540)
329 2xwt_C Thyrotropin receptor; s 99.9 1.5E-24 5.2E-29 214.3 15.9 197 97-299 31-236 (239)
330 3goz_A Leucine-rich repeat-con 99.9 2.6E-26 8.8E-31 241.9 1.6 252 77-328 2-299 (362)
331 2xwt_C Thyrotropin receptor; s 99.9 2.9E-24 1E-28 212.3 15.0 197 73-275 31-236 (239)
332 4ay9_X Follicle-stimulating ho 99.9 1.6E-23 5.4E-28 219.4 17.0 240 76-324 12-257 (350)
333 3m19_A Variable lymphocyte rec 99.9 2.7E-23 9.2E-28 206.9 17.3 176 99-277 16-191 (251)
334 3m19_A Variable lymphocyte rec 99.9 7.1E-23 2.4E-27 203.8 19.5 181 73-256 14-194 (251)
335 3goz_A Leucine-rich repeat-con 99.9 7.3E-26 2.5E-30 238.4 -2.4 250 55-304 4-299 (362)
336 4glp_A Monocyte differentiatio 99.9 3.1E-24 1E-28 220.9 9.5 224 50-279 65-308 (310)
337 1h6u_A Internalin H; cell adhe 99.9 1.2E-23 4.2E-28 215.9 13.8 194 94-303 38-231 (308)
338 4glp_A Monocyte differentiatio 99.9 4.2E-24 1.4E-28 219.9 10.3 200 121-326 91-307 (310)
339 2ast_B S-phase kinase-associat 99.9 6.3E-25 2.2E-29 229.1 4.1 157 71-227 91-257 (336)
340 2ca6_A RAN GTPase-activating p 99.9 5.5E-26 1.9E-30 241.9 -4.8 190 65-254 24-257 (386)
341 2ca6_A RAN GTPase-activating p 99.9 7.5E-26 2.6E-30 240.8 -4.6 255 74-329 10-319 (386)
342 1h6u_A Internalin H; cell adhe 99.9 2.9E-23 1E-27 213.0 14.8 191 72-278 40-230 (308)
343 3ogk_B Coronatine-insensitive 99.9 2.7E-26 9.4E-31 258.9 -9.6 342 3-347 139-524 (592)
344 2ast_B S-phase kinase-associat 99.9 1E-24 3.4E-29 227.6 1.9 249 75-331 49-311 (336)
345 4ay9_X Follicle-stimulating ho 99.9 1.1E-22 3.7E-27 213.0 16.2 222 73-299 30-256 (350)
346 3ogk_B Coronatine-insensitive 99.9 6.4E-26 2.2E-30 255.9 -11.0 323 24-347 110-499 (592)
347 1zar_A RIO2 kinase; serine kin 99.9 1.3E-22 4.3E-27 204.8 10.5 155 430-615 84-252 (282)
348 2o6s_A Variable lymphocyte rec 99.9 2.2E-21 7.4E-26 187.2 16.7 152 76-230 10-161 (208)
349 2p1m_B Transport inhibitor res 99.9 5.4E-25 1.8E-29 248.5 -10.8 202 144-347 288-517 (594)
350 2o6s_A Variable lymphocyte rec 99.9 5.6E-21 1.9E-25 184.3 17.9 181 100-290 10-190 (208)
351 2p1m_B Transport inhibitor res 99.9 3.2E-24 1.1E-28 242.1 -9.3 324 1-326 104-519 (594)
352 3cvr_A Invasion plasmid antige 99.8 1.8E-20 6.2E-25 206.2 16.9 189 74-290 60-255 (571)
353 3cvr_A Invasion plasmid antige 99.8 2.2E-20 7.6E-25 205.5 17.2 189 98-314 60-255 (571)
354 2v9t_B SLIT homolog 2 protein 99.8 6.1E-21 2.1E-25 185.4 10.9 152 148-302 14-165 (220)
355 1h6t_A Internalin B; cell adhe 99.8 3.5E-21 1.2E-25 195.7 8.9 171 71-255 44-214 (291)
356 1h6t_A Internalin B; cell adhe 99.8 6.9E-21 2.4E-25 193.5 11.0 191 75-281 26-216 (291)
357 2xot_A Amphoterin-induced prot 99.8 1.8E-20 6.2E-25 196.9 14.3 152 76-230 21-176 (361)
358 2v9t_B SLIT homolog 2 protein 99.8 7.1E-20 2.4E-24 177.8 17.2 151 76-229 14-164 (220)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 6.9E-21 2.4E-25 185.0 10.0 136 195-330 34-170 (220)
360 1m9s_A Internalin B; cell inva 99.8 6.8E-21 2.3E-25 212.0 10.8 170 49-232 43-212 (605)
361 2xot_A Amphoterin-induced prot 99.8 3.6E-20 1.2E-24 194.6 15.7 176 100-278 21-202 (361)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 1E-19 3.4E-24 176.8 16.7 152 76-230 14-166 (220)
363 1m9s_A Internalin B; cell inva 99.8 1.8E-20 6.3E-25 208.5 12.6 203 50-268 22-224 (605)
364 3e6j_A Variable lymphocyte rec 99.8 4.6E-19 1.6E-23 173.3 16.9 151 76-230 22-172 (229)
365 1xeu_A Internalin C; cellular 99.8 1.1E-19 3.9E-24 181.5 11.7 168 50-232 20-187 (263)
366 3sb4_A Hypothetical leucine ri 99.8 1.7E-20 5.8E-25 194.6 5.0 237 76-319 75-327 (329)
367 1xeu_A Internalin C; cellular 99.8 4.7E-20 1.6E-24 184.3 7.4 171 71-256 17-187 (263)
368 3e6j_A Variable lymphocyte rec 99.8 1E-18 3.5E-23 170.8 16.4 153 99-255 21-173 (229)
369 4fdw_A Leucine rich hypothetic 99.8 9.8E-18 3.3E-22 177.4 22.9 266 25-302 112-383 (401)
370 4ezg_A Putative uncharacterize 99.8 8.1E-19 2.8E-23 167.4 12.3 154 22-206 40-194 (197)
371 4ezg_A Putative uncharacterize 99.8 5.4E-19 1.8E-23 168.6 10.3 150 96-253 43-193 (197)
372 4fdw_A Leucine rich hypothetic 99.8 1.4E-17 4.8E-22 176.2 21.0 265 49-326 113-383 (401)
373 1zth_A RIO1 serine protein kin 99.8 1.3E-18 4.4E-23 173.3 11.7 141 437-592 48-219 (258)
374 1dce_A Protein (RAB geranylger 99.8 1E-21 3.4E-26 217.5 -12.3 104 195-303 443-547 (567)
375 1dce_A Protein (RAB geranylger 99.8 2.8E-21 9.7E-26 213.9 -10.2 204 70-296 346-567 (567)
376 4b8c_D Glucose-repressible alc 99.7 9.4E-19 3.2E-23 199.9 9.0 189 127-326 207-404 (727)
377 3sb4_A Hypothetical leucine ri 99.7 2.3E-18 7.9E-23 178.5 10.8 285 2-296 25-328 (329)
378 1w8a_A SLIT protein; signaling 99.7 1.8E-18 6.1E-23 164.1 8.6 130 172-304 11-141 (192)
379 1w8a_A SLIT protein; signaling 99.7 7.5E-18 2.6E-22 159.8 10.1 131 148-281 11-142 (192)
380 4b8c_D Glucose-repressible alc 99.7 1.2E-18 4.1E-23 199.0 3.8 188 104-302 208-404 (727)
381 2wfh_A SLIT homolog 2 protein 99.7 2.1E-17 7.2E-22 156.6 7.7 112 218-330 32-143 (193)
382 2ell_A Acidic leucine-rich nuc 99.7 9.4E-17 3.2E-21 148.8 9.5 132 97-230 24-160 (168)
383 2ell_A Acidic leucine-rich nuc 99.7 1.7E-16 5.9E-21 147.0 10.8 132 73-206 24-160 (168)
384 2wfh_A SLIT homolog 2 protein 99.7 7.3E-16 2.5E-20 146.0 14.2 126 76-205 13-138 (193)
385 4fs7_A Uncharacterized protein 99.6 7.5E-15 2.6E-19 156.0 22.1 296 14-323 59-376 (394)
386 2o6r_A Variable lymphocyte rec 99.6 1.6E-15 5.5E-20 141.7 14.0 109 146-254 29-137 (177)
387 2o6r_A Variable lymphocyte rec 99.6 2.3E-15 8E-20 140.6 14.7 109 122-230 29-137 (177)
388 2je0_A Acidic leucine-rich nuc 99.6 2.4E-16 8.2E-21 142.8 7.5 127 145-273 17-148 (149)
389 4gyi_A RIO2 kinase; protein ki 99.6 6E-16 2E-20 159.5 11.1 141 437-593 96-266 (397)
390 2je0_A Acidic leucine-rich nuc 99.6 3.3E-16 1.1E-20 141.9 7.9 128 193-322 17-149 (149)
391 1a9n_A U2A', U2A'; complex (nu 99.6 1.1E-15 3.7E-20 142.7 8.8 132 93-229 15-152 (176)
392 4fs7_A Uncharacterized protein 99.6 7.8E-14 2.7E-18 148.1 21.0 301 2-318 71-393 (394)
393 1a9n_A U2A', U2A'; complex (nu 99.6 3.1E-15 1.1E-19 139.6 8.7 134 68-206 14-153 (176)
394 1ds9_A Outer arm dynein; leuci 99.5 6.4E-17 2.2E-21 154.3 -5.4 156 166-328 15-187 (198)
395 4gt6_A Cell surface protein; l 99.5 1E-12 3.4E-17 139.6 24.5 299 14-323 51-367 (394)
396 1ds9_A Outer arm dynein; leuci 99.5 6E-17 2.1E-21 154.5 -8.7 132 164-302 43-185 (198)
397 3g39_A Variable lymphocyte rec 99.5 1.6E-13 5.5E-18 126.9 11.9 104 76-182 12-115 (170)
398 2r9u_A Variable lymphocyte rec 99.5 2.6E-13 8.9E-18 125.9 11.9 104 76-182 15-118 (174)
399 4gt6_A Cell surface protein; l 99.5 5.8E-12 2E-16 133.7 23.4 309 3-325 65-390 (394)
400 3g39_A Variable lymphocyte rec 99.5 3.2E-13 1.1E-17 124.9 11.8 104 124-230 12-115 (170)
401 2r9u_A Variable lymphocyte rec 99.4 6E-13 2E-17 123.5 11.9 104 124-230 15-118 (174)
402 3un9_A NLR family member X1; l 99.4 3.5E-15 1.2E-19 156.3 -9.2 88 169-256 155-254 (372)
403 3un9_A NLR family member X1; l 99.3 9.8E-15 3.4E-19 152.9 -7.5 143 145-287 101-261 (372)
404 4h09_A Hypothetical leucine ri 99.3 9.5E-11 3.3E-15 123.6 23.0 128 189-320 213-340 (379)
405 3tm0_A Aminoglycoside 3'-phosp 99.3 1.3E-11 4.4E-16 123.2 11.5 146 432-590 10-212 (263)
406 2ifg_A High affinity nerve gro 99.3 1.3E-11 4.3E-16 128.7 11.1 103 77-182 12-116 (347)
407 2ifg_A High affinity nerve gro 99.2 2.6E-11 8.7E-16 126.4 12.5 103 149-254 12-116 (347)
408 4h09_A Hypothetical leucine ri 99.2 1.1E-09 3.6E-14 115.6 25.0 299 2-313 46-356 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.1 6.9E-11 2.4E-15 117.7 8.6 138 436-591 20-214 (264)
410 2ra8_A Uncharacterized protein 99.0 4.9E-11 1.7E-15 123.6 2.2 83 216-300 251-341 (362)
411 3dxp_A Putative acyl-COA dehyd 99.0 1.8E-09 6.1E-14 112.9 12.4 143 440-591 42-248 (359)
412 2ra8_A Uncharacterized protein 99.0 4.9E-11 1.7E-15 123.6 0.2 85 239-324 250-341 (362)
413 3sg8_A APH(2'')-ID; antibiotic 98.9 1.6E-09 5.4E-14 110.4 5.6 184 441-643 25-288 (304)
414 3r70_A Aminoglycoside phosphot 98.7 1.3E-07 4.6E-12 96.7 14.0 138 437-593 38-239 (320)
415 1io0_A Tropomodulin; LRR prote 98.5 6.4E-09 2.2E-13 97.1 -1.5 41 93-133 32-77 (185)
416 1io0_A Tropomodulin; LRR prote 98.5 1.1E-08 3.7E-13 95.6 -0.4 117 66-182 29-164 (185)
417 4gkh_A Aminoglycoside 3'-phosp 98.5 9.1E-07 3.1E-11 88.2 12.3 135 443-591 31-223 (272)
418 3tdw_A Gentamicin resistance p 98.3 3.4E-06 1.2E-10 85.5 12.9 137 441-592 24-225 (306)
419 3rw6_A Nuclear RNA export fact 98.3 4.5E-08 1.5E-12 96.0 -1.4 30 242-271 221-257 (267)
420 3d1u_A Putative fructosamine-3 98.3 2.2E-06 7.4E-11 85.9 10.6 78 438-523 17-97 (288)
421 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.3E-06 7.8E-11 88.9 11.1 145 438-592 43-244 (362)
422 3rw6_A Nuclear RNA export fact 98.3 3.6E-08 1.2E-12 96.6 -2.7 80 118-199 167-257 (267)
423 3e4g_A ATP synthase subunit S, 98.2 3.9E-07 1.3E-11 82.6 2.0 84 73-156 61-150 (176)
424 3ats_A Putative uncharacterize 98.1 4.2E-06 1.5E-10 87.0 8.1 84 441-525 25-122 (357)
425 3e4g_A ATP synthase subunit S, 98.1 5.9E-07 2E-11 81.5 1.2 84 217-300 61-150 (176)
426 2olc_A MTR kinase, methylthior 97.9 2.7E-05 9.2E-10 82.2 10.5 79 441-521 35-120 (397)
427 2q83_A YTAA protein; 2635576, 97.9 3.9E-05 1.3E-09 79.1 10.6 141 442-591 38-252 (346)
428 3jr1_A Putative fructosamine-3 97.9 7.4E-05 2.5E-09 75.3 11.6 138 441-587 41-232 (312)
429 1pgv_A TMD-1, tropomodulin TMD 97.7 7E-06 2.4E-10 75.9 0.8 63 96-158 40-111 (197)
430 2pyw_A Uncharacterized protein 97.6 0.00038 1.3E-08 73.8 12.7 76 561-638 232-312 (420)
431 1pgv_A TMD-1, tropomodulin TMD 97.5 1.7E-05 5.9E-10 73.3 1.0 115 68-182 36-170 (197)
432 3f7w_A Putative fructosamine-3 97.5 0.00029 9.8E-09 70.5 9.8 80 436-523 15-97 (288)
433 3csv_A Aminoglycoside phosphot 97.3 0.00065 2.2E-08 69.5 10.0 141 443-592 25-218 (333)
434 3dxq_A Choline/ethanolamine ki 97.2 0.00076 2.6E-08 67.9 8.9 71 441-523 23-95 (301)
435 1zyl_A Hypothetical protein YI 97.1 0.0029 1E-07 64.4 12.2 157 427-591 12-223 (328)
436 2ppq_A HSK, HK, homoserine kin 97.1 0.0032 1.1E-07 63.9 11.9 159 426-591 7-217 (322)
437 3rfe_A Platelet glycoprotein I 97.0 0.0004 1.4E-08 59.9 4.0 42 289-330 31-72 (130)
438 3rfe_A Platelet glycoprotein I 97.0 0.0011 3.7E-08 57.2 6.1 55 77-133 12-67 (130)
439 2yle_A Protein spire homolog 1 96.9 0.0039 1.3E-07 57.8 9.6 102 522-641 34-135 (229)
440 1nw1_A Choline kinase (49.2 KD 96.9 0.0012 4E-08 70.1 7.1 72 441-522 78-158 (429)
441 3feg_A Choline/ethanolamine ki 96.8 0.0036 1.2E-07 64.7 9.8 141 442-591 56-254 (379)
442 2qg7_A Ethanolamine kinase PV0 96.7 0.0093 3.2E-07 63.4 11.7 73 442-523 114-188 (458)
443 3i1a_A Spectinomycin phosphotr 96.5 0.008 2.7E-07 61.4 9.8 32 561-592 206-237 (339)
444 3c5i_A Choline kinase; choline 96.5 0.0037 1.3E-07 64.9 7.2 72 442-522 39-120 (369)
445 3f2s_A CK, chetk-alpha, cholin 95.9 0.019 6.5E-07 59.6 8.9 146 442-591 58-280 (401)
446 3mes_A Choline kinase; malaria 94.6 0.17 5.9E-06 52.9 11.1 141 441-591 75-291 (424)
447 2ks1_B Epidermal growth factor 92.0 0.14 4.9E-06 33.6 3.3 27 375-401 12-40 (44)
448 2jwa_A Receptor tyrosine-prote 91.8 0.085 2.9E-06 34.5 2.0 26 375-400 13-39 (44)
449 3g15_A CK, chetk-alpha, cholin 91.6 0.35 1.2E-05 50.4 7.8 29 563-591 246-280 (401)
450 4ann_A ESSB; membrane protein, 91.2 0.61 2.1E-05 43.2 8.0 117 494-644 43-159 (215)
451 2l2t_A Receptor tyrosine-prote 90.4 0.21 7.3E-06 32.7 2.9 26 375-400 11-38 (44)
452 4ano_A ESSB; membrane protein, 87.2 1.8 6E-05 40.2 8.0 114 494-643 48-163 (219)
453 2lz0_A Uncharacterized protein 84.0 2.2 7.6E-05 34.1 6.2 47 108-155 7-53 (100)
454 2lz0_A Uncharacterized protein 79.7 4.1 0.00014 32.5 6.3 49 83-132 6-54 (100)
455 2ks1_B Epidermal growth factor 74.2 2.2 7.4E-05 28.1 2.5 28 374-401 15-43 (44)
456 3cxl_A N-chimerin; SH2, RHO-GA 68.7 0.63 2.2E-05 49.3 -1.6 63 440-507 146-215 (463)
457 2l2t_A Receptor tyrosine-prote 66.5 4.5 0.00015 26.5 2.7 26 376-401 16-42 (44)
458 2l8s_A Integrin alpha-1; trans 64.6 5.4 0.00018 27.3 2.9 22 372-393 8-29 (54)
459 2k9y_A Ephrin type-A receptor 60.3 4.3 0.00015 26.2 1.8 9 390-398 30-38 (41)
460 1iij_A ERBB-2 receptor protein 60.3 2.2 7.4E-05 26.4 0.3 24 376-399 10-34 (35)
461 2knc_A Integrin alpha-IIB; tra 59.0 9.7 0.00033 26.2 3.4 22 372-393 11-32 (54)
462 2jwa_A Receptor tyrosine-prote 55.5 6.1 0.00021 25.8 1.9 18 384-401 26-43 (44)
463 2k1k_A Ephrin type-A receptor 52.2 9.6 0.00033 24.1 2.3 11 375-385 12-22 (38)
464 2k1a_A Integrin alpha-IIB; sin 40.2 17 0.0006 23.5 2.2 24 372-395 9-32 (42)
465 3ls8_A Phosphatidylinositol 3- 30.8 4.1E+02 0.014 28.7 12.3 46 538-590 454-501 (614)
466 1cja_A Protein (actin-fragmin 29.0 1.8E+02 0.0061 28.7 8.4 140 438-591 71-237 (342)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.1e-53 Score=433.26 Aligned_cols=254 Identities=26% Similarity=0.439 Sum_probs=209.0
Q ss_pred ccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
++|.+.+.||+|+||.||+|.+. +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 67889999999999999999763 4778999999752 2345678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccc----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC
Q 039322 510 HSFLVYELLERGSLAAILSSDT----------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY 579 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 579 (708)
..++|||||++|+|.++++..+ ....++|.++..++.|||+||+|||++ +|+||||||+|||+++++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 9999999999999999997643 234689999999999999999999999 999999999999999999
Q ss_pred cEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccc
Q 039322 580 EAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTD 656 (708)
Q Consensus 580 ~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 656 (708)
.+||+|||+|+........ .....||+.|||||++.+..++.++|||||||++|||+| |+.||..... .
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--------~ 237 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------N 237 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------H
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------H
Confidence 9999999999866543322 223568999999999999999999999999999999999 9999974322 1
Q ss_pred cccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 IALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+..+...+.+... +.++.+++.+||+.||++||||+||.+.|+
T Consensus 238 ~~~~~i~~~~~~~~p~~~---~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 238 EVIECITQGRVLQRPRTC---PQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHHHHTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 222223333222222222 335888999999999999999999988774
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.1e-53 Score=433.19 Aligned_cols=255 Identities=21% Similarity=0.336 Sum_probs=210.2
Q ss_pred ccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
.++++.+.||+|+||.||+|.+. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 56778889999999999999762 46789999997532 2234678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccc-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 039322 510 HSFLVYELLERGSLAAILSSDT-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 576 (708)
..++|||||++|+|.++|.... ....++|.++.+++.|||+||+|||++ +||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEEC
Confidence 9999999999999999996532 124589999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccc
Q 039322 577 LEYEAHVADFGIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSL 653 (708)
Q Consensus 577 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~ 653 (708)
+++.+||+|||+|+.....+. ......||++|||||++.++.++.++|||||||++|||+| |+.||.....
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------ 253 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------ 253 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH------
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH------
Confidence 999999999999986643322 2344678999999999999999999999999999999998 8999974322
Q ss_pred ccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+..+...+.+..+ +..+.+++.+||+.||++||||+||+++|+
T Consensus 254 --~~~~~~i~~~~~~~~p~~~---~~~~~~li~~C~~~dP~~RPs~~ei~~~L~ 302 (308)
T 4gt4_A 254 --QDVVEMIRNRQVLPCPDDC---PAWVYALMIECWNEFPSRRPRFKDIHSRLR 302 (308)
T ss_dssp --HHHHHHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --HHHHHHHHcCCCCCCcccc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 2222333333333222222 345888999999999999999999999986
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.4e-53 Score=434.39 Aligned_cols=254 Identities=27% Similarity=0.449 Sum_probs=203.3
Q ss_pred ccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
++|.+.+.||+|+||.||+|++. +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 57888999999999999999764 4788999999752 3345678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhccccc------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 039322 510 HSFLVYELLERGSLAAILSSDTA------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 577 (708)
..++|||||++|+|.++++.... ..+++|.+++.|+.|||+||+|||++ +||||||||+|||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECC
Confidence 99999999999999999976532 24589999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccc
Q 039322 578 EYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLN 654 (708)
Q Consensus 578 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~ 654 (708)
++.+||+|||+|+........ .....||+.|||||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~------- 266 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN------- 266 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-------
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-------
Confidence 999999999999876443322 234678999999999999999999999999999999999 9999974322
Q ss_pred cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+......+.+.. .+.++.+|+.+||++||++||||+||+++|+
T Consensus 267 -~~~~~~i~~g~~~~~p~~---~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 267 -TEAIDCITQGRELERPRA---CPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp -HHHHHHHHHTCCCCCCTT---CCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred -HHHHHHHHcCCCCCCccc---ccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 111222222221111122 2335888999999999999999999999885
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.3e-53 Score=436.53 Aligned_cols=255 Identities=22% Similarity=0.325 Sum_probs=207.8
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|.. .+|+.||||++.+... .....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC--CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 7899999999999999999965 5799999999976432 234567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||||+||+|.+++...+ ...+++.+++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 99999999999997543 23478999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
........+||+.|+|||++.+..++.++||||+||++|||+||+.||..... ...+..+.....++.+..
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~~~~~~~~~~- 248 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--------KNLVLKIISGSFPPVSLH- 248 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCCCCTT-
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHcCCCCCCCcc-
Confidence 33334556799999999999999999999999999999999999999974321 222233333333322222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.++.++|.+||++||++|||++|+++|-+
T Consensus 249 --~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~ 279 (350)
T 4b9d_A 249 --YSYDLRSLVSQLFKRNPRDRPSVNSILEKGF 279 (350)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHhcCHH
Confidence 2335788999999999999999999998743
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-52 Score=425.12 Aligned_cols=256 Identities=23% Similarity=0.362 Sum_probs=200.9
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
+++.+.+.||+|+||+||+|.+++ .||||+++... ......+.|.+|++++++++|||||+++|++.+ +..++||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 678889999999999999998753 59999987532 233456789999999999999999999998865 5689999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
|||++|+|.++++... ..+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999997543 4589999999999999999999999 9999999999999999999999999999866433
Q ss_pred C--CccccccccccccCcccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 596 S--SNWTEFAGTYGYVAPELAYT---MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 596 ~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
. .......||+.|||||++.+ +.++.++|||||||++|||+||+.||......... ..........+..+..
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~---~~~~~~~~~~p~~~~~ 262 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI---IFMVGRGYASPDLSKL 262 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH---HHHHHTTCCCCCSTTS
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH---HHHHhcCCCCCCcccc
Confidence 2 22345689999999999864 45899999999999999999999999743211000 0001111122222211
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+..+.+++.+||+.||++||||+||+++|+
T Consensus 263 ---~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 263 ---YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred ---cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1223346889999999999999999999998875
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.4e-53 Score=433.70 Aligned_cols=253 Identities=27% Similarity=0.403 Sum_probs=211.8
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
..|+..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++|++++|||||+++++|.+++..|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~----~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGG----GCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecC----chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 5699999999999999999966 47999999998652 122345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||||+||+|.+++... .+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+.+..
T Consensus 150 mEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 150 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp ECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 9999999999999643 489999999999999999999999 999999999999999999999999999998776
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
........+||+.|+|||++.+..|+.++||||+||++|||++|+.||...... ..+..+.+. .++.....
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~-~~~~~~~~ 293 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDN-LPPRLKNL 293 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHS-SCCCCSCG
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcC-CCCCCCcc
Confidence 656667789999999999999999999999999999999999999999743221 111111111 11111122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
...+.++.+++.+||++||++|||++|+++|-++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~ 327 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence 2233468899999999999999999999988553
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.4e-52 Score=421.76 Aligned_cols=249 Identities=21% Similarity=0.300 Sum_probs=207.8
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||+||+|.. .+|+.||||++.+.. .......+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~-~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH-IIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-HHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHH-CCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 6799999999999999999965 579999999987521 01122356799999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||||+||+|.+++...+ .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999997543 489999999999999999999999 999999999999999999999999999997754
Q ss_pred CCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 595 ESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 595 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
... .....+||+.|+|||++.+..++.++||||+||++|||+||+.||..... ......+....+..+..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~~~~~~p~~ 256 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--------GLIFAKIIKLEYDFPEK 256 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCCTT
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCcc
Confidence 332 34567899999999999999999999999999999999999999974321 22222333333322221
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVT 703 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 703 (708)
.+.++.++|.+|+++||++|||++|+.
T Consensus 257 ----~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 257 ----FFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ----CCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ----cCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 123578899999999999999999864
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.3e-52 Score=434.77 Aligned_cols=252 Identities=26% Similarity=0.384 Sum_probs=210.9
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+.|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++|++++|||||+++++|.+++..|+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT----CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 5699999999999999999965 469999999997532 12345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
||||+||+|.++++.. .+++.++..++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 9999999999999643 389999999999999999999999 999999999999999999999999999998776
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||......... ........+.+.. .
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~-----~~i~~~~~~~~~~----~ 370 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-----KMIRDNLPPRLKN----L 370 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCSC----T
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-----HHHHcCCCCCCcc----c
Confidence 666667789999999999999999999999999999999999999999743221110 0011111111111 1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....++.+||.+||++||++|||++|+++|-+
T Consensus 371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~ 403 (423)
T 4fie_A 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 403 (423)
T ss_dssp TSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHH
Confidence 122345788999999999999999999998854
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2e-51 Score=409.54 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=193.8
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|.. .+|+.||||++++... ......+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHc-CCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 6899999999999999999975 4699999999976322 1223456799999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+ +|+|.+++...+ .+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred EeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 9999 679999997543 489999999999999999999999 999999999999999999999999999986653
Q ss_pred CCCccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
. .......||+.|+|||++.+..+ +.++||||+||++|||+||+.||+.... ......+.......+..
T Consensus 165 ~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--------~~~~~~i~~~~~~~p~~- 234 (275)
T 3hyh_A 165 G-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNISNGVYTLPKF- 234 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCCTT-
T ss_pred C-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCCCC-
Confidence 3 33345789999999999988776 5799999999999999999999974321 11222222222222211
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.++.+++.+||++||++|||++|+++|-+
T Consensus 235 ---~s~~~~~li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 235 ---LSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHHcCcc
Confidence 1235788999999999999999999999754
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.7e-51 Score=410.73 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=200.5
Q ss_pred ccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee----CCeeE
Q 039322 438 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH----ARHSF 512 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----~~~~~ 512 (708)
|++.+.||+|+||.||+|.+ .+++.||+|++.... ......+.|.+|++++++++|||||+++++|.. ++..|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 105 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK--LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEE
Confidence 36677899999999999965 468899999987532 123456789999999999999999999999865 35689
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEccCCCCCeeeCC-CCcEEEeecccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP--IVHQDISSKNLLLDL-EYEAHVADFGIA 589 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~~-~~~~kl~Dfg~a 589 (708)
+|||||++|+|.+++... ..+++..+..++.||+.||+|||++ + |+||||||+|||++. ++.+||+|||+|
T Consensus 106 lvmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla 179 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCC
Confidence 999999999999999754 3489999999999999999999998 6 999999999999984 799999999999
Q ss_pred cccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
+... .......+||+.|||||++.+ +++.++|||||||++|||+||+.||..... .......+.....+.
T Consensus 180 ~~~~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~~~i~~~~~~~ 249 (290)
T 3fpq_A 180 TLKR--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVKPA 249 (290)
T ss_dssp GGCC--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTTCCCG
T ss_pred EeCC--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHHHHHHcCCCCC
Confidence 8543 233456789999999998865 699999999999999999999999963221 111112222221111
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
......+.++.+++.+||++||++|||++|+++|-++
T Consensus 250 --~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~ 286 (290)
T 3fpq_A 250 --SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286 (290)
T ss_dssp --GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred --CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence 1111122357899999999999999999999998653
No 11
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-51 Score=422.30 Aligned_cols=249 Identities=24% Similarity=0.277 Sum_probs=201.3
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.+.|++.+.||+|+||.||+|.+ .+|+.||||+++.... ..+|++++++++|||||++++++.+++..|+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 36788899999999999999975 4699999999976321 2369999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEEeeccccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAKFL 592 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~a~~~ 592 (708)
|||||+||+|.++++..+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+|+..
T Consensus 128 vmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp EECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 999999999999997543 489999999999999999999999 999999999999999987 6999999999877
Q ss_pred CCCCCc-----cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 593 KPESSN-----WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 593 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
...... ....+||+.|||||++.+..++.++||||+||++|||+||+.||...... .....+.....
T Consensus 202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--------~~~~~i~~~~~ 273 (336)
T 4g3f_A 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG--------PLCLKIASEPP 273 (336)
T ss_dssp ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS--------CCHHHHHHSCC
T ss_pred cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHHcCCC
Confidence 543321 12357999999999999999999999999999999999999999743211 11111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+. .......+..+.++|.+||++||++|||+.|+++++.
T Consensus 274 ~~-~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 274 PI-REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp GG-GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc-hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 00 0011122345788999999999999999999998864
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9.8e-52 Score=417.57 Aligned_cols=252 Identities=24% Similarity=0.322 Sum_probs=201.9
Q ss_pred ccccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
++|++.+.||+|+||+||+|+.. +++.||||++++... .......+.+|++++++++|||||++++++.+++..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL--KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEE--EEEECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHc--ChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 67999999999999999999652 478999999976321 112344688899999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
|+|||||+||+|.+++...+ .+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999997543 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
............||+.|+|||++.+..++.++||||+||++|||+||+.||..... ......+.......+.
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~~~~~~p~ 247 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--------KETMTMILKAKLGMPQ 247 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCT
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--------HHHHHHHHcCCCCCCC
Confidence 65555555667899999999999999999999999999999999999999974322 2222233333332222
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPT-----MKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~ 707 (708)
. .+.++.+++.+||++||++||| ++|+++|-+
T Consensus 248 ~----~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~ 284 (304)
T 3ubd_A 248 F----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284 (304)
T ss_dssp T----SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGG
T ss_pred c----CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcc
Confidence 1 2235788999999999999998 478888754
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.3e-51 Score=421.00 Aligned_cols=263 Identities=21% Similarity=0.340 Sum_probs=210.9
Q ss_pred HHHHHHhccccccceeccccCccEEEEEeCC------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC-CceeeE
Q 039322 429 DEIVRATNDFDAQYCIGNGGHGSVYRAELPS------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH-RNIVKF 501 (708)
Q Consensus 429 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~l 501 (708)
++++...++|++.+.||+|+||.||+|.+.. ++.||||+++... .....+.|.+|++++++++| ||||++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3445556889999999999999999997532 3579999997642 23456789999999999975 899999
Q ss_pred EEEEeeC-CeeEEEEEeccCCCHHHHhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcc
Q 039322 502 YGFCSHA-RHSFLVYELLERGSLAAILSSDTA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQD 567 (708)
Q Consensus 502 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~d 567 (708)
+|+|.++ +..++|||||++|+|.++|+.... ...+++.++..++.|||+||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9999765 578999999999999999975432 24489999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCc
Q 039322 568 ISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDF 644 (708)
Q Consensus 568 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~ 644 (708)
|||+|||+++++.+||+|||+|+....+... .....||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999876544332 234678999999999999999999999999999999998 9999974
Q ss_pred cccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 645 LSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.... ......+.++...+.+... +.++.+++.+||+.||++||||+||+++|+
T Consensus 291 ~~~~-------~~~~~~i~~g~~~~~p~~~---~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 291 VKID-------EEFCRRLKEGTRMRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp CCCS-------HHHHHHHHHTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCHH-------HHHHHHHHcCCCCCCCccC---CHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 3211 1111111111111111222 235788999999999999999999999974
No 14
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.5e-50 Score=409.42 Aligned_cols=262 Identities=23% Similarity=0.294 Sum_probs=198.3
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC----ee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR----HS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----~~ 511 (708)
.+|.+.+.||+|+||+||+|.+ +|+.||||+++.. ......+..|+..+.+++|||||+++|++.+++ ..
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~-----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc-----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 5788899999999999999988 5899999998642 122223344666677889999999999998754 57
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD-----CFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
|+|||||++|+|.++++.. .++++.+.+++.|++.||+|||++ +.++|+||||||+|||++.++.+||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999999754 389999999999999999999976 2458999999999999999999999999
Q ss_pred ccccccCCCCCc----cccccccccccCccccccC------CCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-----
Q 039322 587 GIAKFLKPESSN----WTEFAGTYGYVAPELAYTM------KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS----- 651 (708)
Q Consensus 587 g~a~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~----- 651 (708)
|+|+........ .....||+.|+|||++.+. .++.++|||||||++|||+||+.||.........
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 999876544322 2345799999999998764 3677999999999999999998887532211100
Q ss_pred --ccccccccccccCCCCCCCC-c--hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 652 --SLNTDIALDEILDPRLPPPS-R--SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 652 --~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..........+......+.. . ...+.+..+.+|+.+||+.||++||||+||++.|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 233 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred cccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 00001111122222222211 1 12244567889999999999999999999999874
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.4e-49 Score=404.21 Aligned_cols=253 Identities=22% Similarity=0.406 Sum_probs=196.4
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC-----
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR----- 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 509 (708)
++|++.+.||+|+||.||+|.. .+|+.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 5799999999999999999965 479999999987532 2334578999999999999999999999987644
Q ss_pred -------eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEE
Q 039322 510 -------HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAH 582 (708)
Q Consensus 510 -------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 582 (708)
..|+|||||++|+|.+++.........++..++.++.||+.||+|||++ ||+||||||+|||++.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 3689999999999999998766555567788999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCc------------cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccc
Q 039322 583 VADFGIAKFLKPESSN------------WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS 650 (708)
Q Consensus 583 l~Dfg~a~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~ 650 (708)
|+|||+|+........ ....+||+.|||||++.+..++.++||||+||++|||++ ||....
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~---- 231 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM---- 231 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----
Confidence 9999999876543221 233579999999999999999999999999999999996 765211
Q ss_pred cccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 651 SSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+..+.+...+ ...........+++.+||++||++|||+.|+++|-+
T Consensus 232 ---~~~~~~~~~~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~ 282 (299)
T 4g31_A 232 ---ERVRTLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAV 282 (299)
T ss_dssp ---HHHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred ---HHHHHHHHHhcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHh
Confidence 011112222232322 223333445678999999999999999999998743
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=9e-47 Score=398.15 Aligned_cols=263 Identities=25% Similarity=0.360 Sum_probs=202.2
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee------C
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH------A 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------~ 508 (708)
++|++.+.||+|+||.||+|.+ .+|+.||||++++.. ......+.+.+|+++|++++|||||++++++.. .
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF--DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc--cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 5799999999999999999965 579999999997643 223456778999999999999999999999764 3
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
+..|+|||||+ |+|.+++...+ .+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 57899999996 68999997543 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC----CCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc---------
Q 039322 589 AKFLKPE----SSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN--------- 654 (708)
Q Consensus 589 a~~~~~~----~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~--------- 654 (708)
|+.+... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||............
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9866432 2233457899999999998775 4689999999999999999999999743211100000
Q ss_pred ------ccccccc---ccCCCCCCCCc-hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 ------TDIALDE---ILDPRLPPPSR-SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 ------~~~~~~~---~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....... ...+..+.+.. .......++.+|+.+||.+||++|||++|+++|-+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 347 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHh
Confidence 0000000 00011110000 00111245778999999999999999999999855
No 17
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.1e-46 Score=432.02 Aligned_cols=359 Identities=36% Similarity=0.572 Sum_probs=300.5
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCC-------------------------CCCCC-C-Ccccc
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIP-------------------------PSLEN-P-MLTRP 54 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-------------------------~~~~~-~-~l~~l 54 (708)
++|++|+|++|++++..|..|.++++|++|+|++|.+.+.+| ..+.. + +|+.|
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L 373 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEE
T ss_pred CcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEE
Confidence 455666666666655555555555555555555555554444 33322 2 45555
Q ss_pred cccCCCccCCCCccccC--CCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCc
Q 039322 55 GLDFNHFTSYLPHNVCR--GGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRND 132 (708)
Q Consensus 55 ~l~~n~~~~~~~~~~~~--l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~ 132 (708)
++++|.+.+..+..+.. +++|++|++++|.+++.+|..+.++++|++|+|++|.+++..+..|..+++|++|++++|+
T Consensus 374 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~ 453 (768)
T 3rgz_A 374 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453 (768)
T ss_dssp ECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred EccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCc
Confidence 55555555555555544 5678888888888888888888888999999999999988888888999999999999999
Q ss_pred ceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcc
Q 039322 133 FYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPE 212 (708)
Q Consensus 133 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 212 (708)
+.+..+..+..+++|+.|+|++|++++..|..|..+++|++|+|++|++++.+|..++.+++|+.|+|++|++++.+|..
T Consensus 454 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 533 (768)
T 3rgz_A 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGG
T ss_pred ccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHH
Confidence 98888888889999999999999999888999999999999999999999899999999999999999999999999999
Q ss_pred cCCCCCCCeEeccCCcccccCCCC--------------------------------------------------------
Q 039322 213 IGSLVDLEYLDLSANRFNNSVPEN-------------------------------------------------------- 236 (708)
Q Consensus 213 ~~~~~~L~~L~l~~N~i~~~~~~~-------------------------------------------------------- 236 (708)
+..+++|++|+|++|++++..|..
T Consensus 534 l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 613 (768)
T 3rgz_A 534 LGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 613 (768)
T ss_dssp GGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCS
T ss_pred HcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccccccc
Confidence 999999999999999988665542
Q ss_pred --------------CCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceeccccccc
Q 039322 237 --------------LGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLS 302 (708)
Q Consensus 237 --------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 302 (708)
+..+++|+.|+|++|++++.+|..|..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|+++
T Consensus 614 ~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~ 693 (768)
T 3rgz_A 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693 (768)
T ss_dssp CTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCE
T ss_pred ccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCccc
Confidence 344678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccccEEecCCCcCCCCCCCccccccCcccccccccCcCCCCCCCCCcccc
Q 039322 303 GSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGGVKGMQPCKVF 362 (708)
Q Consensus 303 ~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~~~ 362 (708)
+.+|..+..+++|+.||+++|+++|.+|....+..+...++.|||+.||.|.. +|+..
T Consensus 694 g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~--~C~~~ 751 (768)
T 3rgz_A 694 GRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP--RCDPS 751 (768)
T ss_dssp ECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC--CCCSC
T ss_pred CcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc--CCCCC
Confidence 99999999999999999999999999999988999999999999999998754 67543
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.9e-46 Score=388.54 Aligned_cols=201 Identities=25% Similarity=0.366 Sum_probs=171.9
Q ss_pred HHHHHHHhccccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEE
Q 039322 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFY 502 (708)
Q Consensus 428 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~ 502 (708)
|+.+....+.|++.+.||+|+||+||+|+.+ .++.||||.+.+. ....++.+|+++++.+ +||||++++
T Consensus 13 ~~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~------~~~~~~~~E~~~l~~~~~h~nIv~l~ 86 (361)
T 4f9c_A 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT------SHPIRIAAELQCLTVAGGQDNVMGVK 86 (361)
T ss_dssp HHHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT------SCHHHHHHHHHHHHHTCSBTTBCCCS
T ss_pred HHhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc------cCHHHHHHHHHHHHHhcCCCCCceEE
Confidence 3344455678999999999999999999642 4678999998653 2345678899999998 699999999
Q ss_pred EEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcE
Q 039322 503 GFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEA 581 (708)
Q Consensus 503 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~ 581 (708)
+++.++++.|+||||+++|+|.+++. .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+
T Consensus 87 ~~~~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~ 157 (361)
T 4f9c_A 87 YCFRKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKY 157 (361)
T ss_dssp EEEEETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEE
T ss_pred EEEEECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeE
Confidence 99999999999999999999999983 388999999999999999999999 99999999999999877 799
Q ss_pred EEeecccccccCCCCC----------------------------ccccccccccccCccccccC-CCCcchhHHHHHHHH
Q 039322 582 HVADFGIAKFLKPESS----------------------------NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLV 632 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~~----------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l 632 (708)
||+|||+|+....... .....+||+.|+|||++.+. .++.++||||+||++
T Consensus 158 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il 237 (361)
T 4f9c_A 158 ALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237 (361)
T ss_dssp EECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred EECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHH
Confidence 9999999986543211 12335799999999998775 488999999999999
Q ss_pred HHHHhCCCCCC
Q 039322 633 LEAIKGKHPRD 643 (708)
Q Consensus 633 ~elltg~~p~~ 643 (708)
|||+||+.||.
T Consensus 238 ~ell~G~~Pf~ 248 (361)
T 4f9c_A 238 LSLLSGRYPFY 248 (361)
T ss_dssp HHHHHTCSSSS
T ss_pred HHHHHCCCCCC
Confidence 99999999995
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.2e-45 Score=409.06 Aligned_cols=256 Identities=20% Similarity=0.320 Sum_probs=214.5
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|+++|+.++|||||+++++|.+++..|+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i 231 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc----chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 36899999999999999999965 47999999998763 33456788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC--CcEEEeecccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE--YEAHVADFGIAKF 591 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~a~~ 591 (708)
|||||+||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 232 v~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp EEECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred EEeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 999999999999996433 3589999999999999999999999 99999999999999865 8999999999998
Q ss_pred cCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
+.+. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...+..+.......+.
T Consensus 307 ~~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~ 377 (573)
T 3uto_A 307 LDPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--------DETLRNVKSCDWNMDD 377 (573)
T ss_dssp CCTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTCCCCCS
T ss_pred ccCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHhCCCCCCc
Confidence 7643 334556899999999999999999999999999999999999999974321 2233333333333332
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.........+.+||.+||++||++|||++|+++|=++
T Consensus 378 ~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~ 414 (573)
T 3uto_A 378 SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414 (573)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCc
Confidence 3333334567899999999999999999999998553
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.2e-45 Score=401.50 Aligned_cols=255 Identities=20% Similarity=0.229 Sum_probs=201.8
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHH---HHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFL---IEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~---~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.++|++.++||+|+||.||+|.. .+|+.||||++.+... ........+. .++.+++.++|||||+++++|.+++.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i-~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI-KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHc-chhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 37899999999999999999965 4699999999865210 0011122233 34566777899999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.|+|||||+||+|.+++...+ .+++..++.++.||+.||+|||++ |||||||||+|||++.+|++||+|||+|+
T Consensus 267 lylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999997543 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
..... .....+||+.|+|||++.. ..++.++||||+||++|||++|+.||....... .......+.......
T Consensus 341 ~~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-----~~~i~~~i~~~~~~~ 413 (689)
T 3v5w_A 341 DFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTLTMAVEL 413 (689)
T ss_dssp ECSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-----HHHHHHHHHHCCCCC
T ss_pred ecCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhhcCCCCCC
Confidence 76543 2345689999999999875 579999999999999999999999997432111 111112222222222
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPT-----MKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~ 707 (708)
+.. .+.++.+||.+||++||++|++ ++||++|-+
T Consensus 414 p~~----~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hpf 452 (689)
T 3v5w_A 414 PDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452 (689)
T ss_dssp CTT----SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGG
T ss_pred Ccc----CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCcc
Confidence 211 2235788999999999999998 799988754
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.3e-44 Score=371.30 Aligned_cols=279 Identities=33% Similarity=0.611 Sum_probs=228.1
Q ss_pred CCchHHHHHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEE
Q 039322 424 GKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYG 503 (708)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~ 503 (708)
..+++.++....++|++.+.||+|+||.||+|...+|+.||||++..... ......+.+|++++++++||||+++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT---QGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC---chHHHHHHHHHHHHHhccCCCccceEE
Confidence 35678899999999999999999999999999888899999999976321 112336889999999999999999999
Q ss_pred EEeeCCeeEEEEEeccCCCHHHHhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEE
Q 039322 504 FCSHARHSFLVYELLERGSLAAILSSDTA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAH 582 (708)
Q Consensus 504 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 582 (708)
++..++..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+++.+||+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 99999999999999999999999976542 34589999999999999999999998777999999999999999999999
Q ss_pred EeecccccccCCCCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc---------c
Q 039322 583 VADFGIAKFLKPESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS---------S 652 (708)
Q Consensus 583 l~Dfg~a~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~---------~ 652 (708)
|+|||++......... .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||+........ .
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 9999999876543332 34456899999999998888999999999999999999999999632211111 1
Q ss_pred cccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...........+..... .........+.+++.+||+.||++|||++||+++|+
T Consensus 255 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQG--NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp TTSSCCSTTSSCTTCTT--SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred HhhchhhhhhcChhhcc--ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 11122223333333322 234556678999999999999999999999999986
No 22
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-43 Score=364.42 Aligned_cols=253 Identities=25% Similarity=0.389 Sum_probs=209.7
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.++++++||||+++++++..++..++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 94 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGG----GCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecc----cccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence 36899999999999999999964 57899999998642 22335678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 95 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999999999654 389999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........||+.|+|||++.+..++.++||||+|+++|||++|+.||.......... .......+....
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~---- 238 (297)
T 3fxz_A 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-----LIATNGTPELQN---- 238 (297)
T ss_dssp STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHHCSCCCSC----
T ss_pred CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHHhCCCCCCCC----
Confidence 65555566789999999999999999999999999999999999999996432111000 000000111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.+++.+||+.||++|||++|+++|-+
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~ 272 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQF 272 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence 1122345789999999999999999999998754
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.1e-44 Score=367.05 Aligned_cols=260 Identities=31% Similarity=0.451 Sum_probs=203.7
Q ss_pred HHHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 430 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 430 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
++....++|++.+.||+|+||.||+|.. +|+.||||++.... ......+.+.+|++++++++||||+++++++..++
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQD--FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCC--CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 3334467999999999999999999987 58899999997643 22345678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEccCCCCCeeeCCCCcEEEeecc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP--IVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
..++||||+++|+|.+++........+++..++.++.|++.||+|||++ | |+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg 184 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFG 184 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC
T ss_pred ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCC
Confidence 9999999999999999998765445589999999999999999999999 8 9999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc--cCC
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI--LDP 665 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~ 665 (708)
+++.............||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ...... ...
T Consensus 185 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--------~~~~~~~~~~~ 256 (309)
T 3p86_A 185 LSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--------QVVAAVGFKCK 256 (309)
T ss_dssp -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--------HHHHHHHHSCC
T ss_pred CCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcCC
Confidence 9986554433445567999999999999999999999999999999999999999743221 111111 111
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+. .....+.+++.+||+.||++|||++|+++.|+
T Consensus 257 ~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 257 RLEIPR----NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp CCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111111 12235889999999999999999999999875
No 24
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3e-43 Score=365.65 Aligned_cols=271 Identities=33% Similarity=0.542 Sum_probs=220.3
Q ss_pred HHHHHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee
Q 039322 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH 507 (708)
Q Consensus 428 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~ 507 (708)
+.++..++++|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES----SQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC----SSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 344555678999999999999999999998889999999987532 2346779999999999999999999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
++..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 9999999999999999999975442 23589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-------cccc
Q 039322 587 GIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-------NTDI 657 (708)
Q Consensus 587 g~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-------~~~~ 657 (708)
|++........ ......|++.|+|||++.+..++.++||||||+++|||++|+.||........... ....
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 99986543222 23345689999999999988999999999999999999999999874322111100 0011
Q ss_pred ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......++.... ......+..+.+++.+||+.||++|||++|++++|+
T Consensus 264 ~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 264 QLEQIVDPNLAD--KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CCCSSSSSSCTT--CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cHHHhcChhhcc--ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 122233333322 223456678999999999999999999999999985
No 25
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.1e-43 Score=363.28 Aligned_cols=264 Identities=25% Similarity=0.364 Sum_probs=215.4
Q ss_pred CCchHHHHHHHhcc----------ccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHh
Q 039322 424 GKLVYDEIVRATND----------FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE 492 (708)
Q Consensus 424 ~~~~~~~~~~~~~~----------~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~ 492 (708)
+.++++++..+++. |+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc----hhHHHHHHHHHHHHHh
Confidence 45677887777754 777789999999999999765 79999999987532 2345678899999999
Q ss_pred ccCCceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 039322 493 IRHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572 (708)
Q Consensus 493 l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 572 (708)
++||||+++++++..++..++||||+++|+|.+++... .+++..+..++.|++.||+|||++ |++||||||+|
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N 171 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS 171 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence 99999999999999999999999999999999998643 489999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc
Q 039322 573 LLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS 652 (708)
Q Consensus 573 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~ 652 (708)
|+++.++.+||+|||++..............||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-- 249 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-- 249 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--
Confidence 999999999999999998776554445566899999999999998999999999999999999999999874321110
Q ss_pred cccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.........+... ........+.+++.+||+.||++|||++|++++-+
T Consensus 250 ---~~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 297 (321)
T 2c30_A 250 ---MKRLRDSPPPKLK----NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297 (321)
T ss_dssp ---HHHHHHSSCCCCT----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred ---HHHHhcCCCCCcC----ccccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 0011111111111 11122345788999999999999999999998754
No 26
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.3e-43 Score=363.98 Aligned_cols=253 Identities=24% Similarity=0.364 Sum_probs=210.2
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.+ .+|+.||||++.... ......+.+.+|+++++.++||||+++++++..++..++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ--LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 47899999999999999999976 679999999987532 123456778899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++...+ .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999999996543 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccccccccccCccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKIT-EKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.. .......||+.|+|||++.+..++ .++||||+||++|+|++|+.||+.... ......+.......+..
T Consensus 166 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~~p~~ 236 (328)
T 3fe3_A 166 VG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--------KELRERVLRGKYRIPFY 236 (328)
T ss_dssp SS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT
T ss_pred CC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCCC
Confidence 43 334556799999999999887765 789999999999999999999974321 11222222222222211
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
....+.+++.+||+.||++|||++|+++|-++
T Consensus 237 ----~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~ 268 (328)
T 3fe3_A 237 ----MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWI 268 (328)
T ss_dssp ----SCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTT
T ss_pred ----CCHHHHHHHHHHCCCChhHCcCHHHHhcCHhh
Confidence 12347789999999999999999999987553
No 27
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-42 Score=403.19 Aligned_cols=348 Identities=34% Similarity=0.532 Sum_probs=238.6
Q ss_pred CCCCcEEECCCCcccccCCccccCC-CCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCcc-ccCCCCccE
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNL-TNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHN-VCRGGALQY 77 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l-~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~-~~~l~~L~~ 77 (708)
+++|++|+|++|++++..|..+.++ ++|++|+|++|.+.+.+|..+.. ++|+.|++++|.+.+.+|.. +..+++|++
T Consensus 268 l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~ 347 (768)
T 3rgz_A 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 347 (768)
T ss_dssp CTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCE
T ss_pred cCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCE
Confidence 5789999999999998888888775 99999999999999999988866 88999999999998667765 888888888
Q ss_pred EeccCCccccccCccCcCCC-CCcEEEccCCccc--------------------------cccccccCCCCCCCEEEccc
Q 039322 78 FGVSENHFQGTIPKILRNCS-SLIRVRLNSNNLT--------------------------GNISEALGIYPNLTFIDLSR 130 (708)
Q Consensus 78 L~l~~n~i~~~~~~~~~~l~-~L~~L~l~~n~i~--------------------------~~~~~~~~~~~~L~~L~l~~ 130 (708)
|++++|.+++.+|..+.+++ +|++|++++|+++ +..+..|..+++|++|++++
T Consensus 348 L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 427 (768)
T 3rgz_A 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 427 (768)
T ss_dssp EECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCS
T ss_pred EeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcC
Confidence 88888888877777766654 5555555555554 44455555555555555555
Q ss_pred CcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCC
Q 039322 131 NDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLP 210 (708)
Q Consensus 131 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 210 (708)
|++++..+..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..+.++++|++|+|++|++++..|
T Consensus 428 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 507 (768)
T 3rgz_A 428 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507 (768)
T ss_dssp SEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred CcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCC
Confidence 55555555555555666666666666655555566666666666666666665566666666666666666666666666
Q ss_pred cccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhh----------------------------
Q 039322 211 PEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELE---------------------------- 262 (708)
Q Consensus 211 ~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---------------------------- 262 (708)
..+..+++|++|+|++|++++..|..+..+++|+.|++++|++++.+|..+.
T Consensus 508 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (768)
T 3rgz_A 508 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC 587 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTC
T ss_pred hHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccc
Confidence 6666666666666666666666666666666666666666666555444321
Q ss_pred ------------------------------------------hhcccchhhcccccCCCCCchhhcCcccCCceeccccc
Q 039322 263 ------------------------------------------KLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNN 300 (708)
Q Consensus 263 ------------------------------------------~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~ 300 (708)
.+++|+.|||++|++++.+|..+..+++|+.|+|++|+
T Consensus 588 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~ 667 (768)
T 3rgz_A 588 HGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667 (768)
T ss_dssp CSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSC
T ss_pred cccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCc
Confidence 23455666666666666666666667777777777777
Q ss_pred ccCCCCCcccccccccEEecCCCcCCCCCCC-ccccccCcccccccccC
Q 039322 301 LSGSIPNCFEGIRGISVIDISDNQLQGPVPN-STAFRNAPVEALKGNKG 348 (708)
Q Consensus 301 l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~ 348 (708)
+++.+|..+..+++|+.|||++|+++|.+|. ...+..++.+.+++|+.
T Consensus 668 l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred cCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 7777777777777777777777777766654 34455666666666653
No 28
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=374.67 Aligned_cols=259 Identities=22% Similarity=0.288 Sum_probs=212.5
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+.+|++++++++||||+++++++.+++..+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK--LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS--CHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 457899999999999999999964 578999999987632 23345677999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC---CCCcEEEeecccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD---LEYEAHVADFGIA 589 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~a 589 (708)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||++
T Consensus 87 lv~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 9999999999999987543 489999999999999999999999 999999999999998 4678999999999
Q ss_pred cccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
..............||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+.......
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~~~~ 232 (444)
T 3soa_A 161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--------HRLYQQIKAGAYDF 232 (444)
T ss_dssp BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCC
T ss_pred EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHhCCCCC
Confidence 8776555555567899999999999998999999999999999999999999964221 11222222222222
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
+...+...+..+.+++.+||+.||++|||++|+++|-+|
T Consensus 233 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~ 271 (444)
T 3soa_A 233 PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271 (444)
T ss_dssp CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTT
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccc
Confidence 222222233468899999999999999999999998654
No 29
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9.5e-43 Score=365.70 Aligned_cols=259 Identities=21% Similarity=0.268 Sum_probs=213.0
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcch--hHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQ--IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
.+.|++.+.||+|+||.||+|... +|+.||+|++++...... ....+.+.+|+.++++++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999664 689999999976432211 12356789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC----cEEEeecc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY----EAHVADFG 587 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 587 (708)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 9999999999999999654 3489999999999999999999999 999999999999998877 79999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
++...... .......||+.|+|||++.+..++.++||||+|+++|+|++|..||.... .......+.....
T Consensus 165 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~--------~~~~~~~i~~~~~ 235 (361)
T 2yab_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANITAVSY 235 (361)
T ss_dssp SCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTTCC
T ss_pred CceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhcCC
Confidence 99876543 23345679999999999998899999999999999999999999997422 1222233333333
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
..+...+......+.++|.+||.+||++|||++|+++|-++
T Consensus 236 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 276 (361)
T 2yab_A 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276 (361)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCc
Confidence 32222222334568899999999999999999999998654
No 30
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-43 Score=362.42 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=212.2
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 478999999999999999999654 6889999998752 2345678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC--CCcEEEeecccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL--EYEAHVADFGIAKF 591 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~a~~ 591 (708)
||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||++..
T Consensus 79 v~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 999999999999996543 3589999999999999999999999 9999999999999987 78999999999987
Q ss_pred cCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
.... .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+.......+.
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~~~~ 224 (321)
T 1tki_A 154 LKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET--------NQQIIENIMNAEYTFDE 224 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCCCCH
T ss_pred CCCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC--------HHHHHHHHHcCCCCCCh
Confidence 6543 33455678999999999998888999999999999999999999997422 12222333333333332
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+..+.+++.+||+.||++|||++|+++|-+
T Consensus 225 ~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 225 EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence 222233456889999999999999999999999865
No 31
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.1e-42 Score=355.30 Aligned_cols=254 Identities=27% Similarity=0.435 Sum_probs=206.7
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|.+.+.||+|+||.||+|.. .+++.||+|.+.. ......+.+.+|++++++++||||+++++++.+++..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR----FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc----CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEE
Confidence 37899999999999999999966 4689999999865 234567789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 85 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp EEECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 999999999999997643 4589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcc--------------ccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-cccccc
Q 039322 594 PESSNW--------------TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-LNTDIA 658 (708)
Q Consensus 594 ~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-~~~~~~ 658 (708)
...... ....||+.|+|||++.+..++.++||||||+++|||++|..||.......... ......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~ 239 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF 239 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc
Confidence 332211 14568999999999999999999999999999999999999986432211110 000111
Q ss_pred cccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+.. +..+.+++.+||+.||++|||++|+++.|+
T Consensus 240 ~~~~~~~~~----------~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 240 LDRYCPPNC----------PPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHHTCCTTC----------CTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccccCCCCC----------CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111111111 124788999999999999999999998875
No 32
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-43 Score=365.64 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=199.9
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... ...+.+.+|++++++++||||+++++++...+..++
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 47899999999999999999965 57999999998764321 234568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 86 v~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 999999999999996543 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCC-ccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 594 PESS-NWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 594 ~~~~-~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
.... ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+.... ......+.......+.
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~ 231 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV--------MALYKKIMRGKYDVPK 231 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCCT
T ss_pred CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCCC
Confidence 3322 3345679999999999988775 8899999999999999999999974321 1122222222222221
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ...+.+++.+||+.||++|||++|+++|-+
T Consensus 232 ~~----s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 232 WL----SPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp TC----CHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred CC----CHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 11 234678999999999999999999998765
No 33
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.3e-42 Score=352.98 Aligned_cols=276 Identities=30% Similarity=0.513 Sum_probs=225.1
Q ss_pred CCchHHHHHHHhcccccc------ceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc
Q 039322 424 GKLVYDEIVRATNDFDAQ------YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN 497 (708)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~------~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~ 497 (708)
..++++++..++++|... +.||+|+||.||+|.. +++.||||++............+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 356889999999999877 8999999999999987 588999999976443333445678999999999999999
Q ss_pred eeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 039322 498 IVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 498 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 577 (708)
|+++++++.+++..++||||+++|+|.+++........+++..++.++.|++.||+|||++ |++||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997655556689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc--
Q 039322 578 EYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-- 653 (708)
Q Consensus 578 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-- 653 (708)
++.+||+|||++......... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||+..........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999866543222 233568999999998765 588999999999999999999999975332111000
Q ss_pred ----ccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 ----NTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+....++.+... .......+.+++.+||+.||++|||+++++++|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMNDA---DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSCC---CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHhhhhhhhhhhhcccccccc---chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 01112233344443332 3345567889999999999999999999999885
No 34
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.9e-42 Score=364.58 Aligned_cols=256 Identities=21% Similarity=0.376 Sum_probs=208.4
Q ss_pred hccccccceeccccCccEEEEEe--------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL--------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC 505 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~ 505 (708)
.++|++.+.||+|+||.||+|.. .++..||||+++.. ......+.+.+|+++++++ +||||+++++++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT---CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC---cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 37899999999999999999965 23567999999764 2334567899999999999 899999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDTA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 572 (708)
..++..|+||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ ||+||||||+|
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N 233 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 233 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccchhh
Confidence 999999999999999999999976432 23579999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccc
Q 039322 573 LLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLIS 649 (708)
Q Consensus 573 ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~ 649 (708)
|+++.++.+||+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-- 311 (370)
T 2psq_A 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-- 311 (370)
T ss_dssp EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--
T ss_pred EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 99999999999999999866543322 233456789999999999999999999999999999999 9999874321
Q ss_pred ccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+........+. .....+.+++.+||+.||++|||++|++++|+
T Consensus 312 ------~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 312 ------EELFKLLKEGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp ------GGHHHHHHTTCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------HHHHHHHhcCCCCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111122221111111 12235888999999999999999999999885
No 35
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.5e-42 Score=360.87 Aligned_cols=254 Identities=23% Similarity=0.277 Sum_probs=209.4
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|..+ +|+.||+|++++... ........+.+|++++++++||||+++++++...+..++
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 378999999999999999999664 689999999865210 012235678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 83 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999999654 3489999999999999999999999 99999999999999999999999999998655
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......+.......+..
T Consensus 157 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~~- 227 (337)
T 1o6l_A 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEEIRFPRT- 227 (337)
T ss_dssp CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT-
T ss_pred cCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCC-
Confidence 444455667899999999999998999999999999999999999999964221 11112222222222211
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
....+.+++.+||++||++|| +++|+++|-+
T Consensus 228 ---~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~ 263 (337)
T 1o6l_A 228 ---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred ---CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence 123578899999999999999 9999998754
No 36
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.3e-41 Score=385.37 Aligned_cols=351 Identities=21% Similarity=0.171 Sum_probs=251.8
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
++|++|+|++|+++++.+..|+++++|++|+|++|.+++..|..|.. ++|+.|++++|.+.+..|..|..+++|++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 34566666666666666656666666666666666666555555543 55666666666666655666666666666666
Q ss_pred cCCccccccCccCcCCCCCcEEEccCCccccc-cccccCCCCCCCEEEcccCcceeeCCCCC------------------
Q 039322 81 SENHFQGTIPKILRNCSSLIRVRLNSNNLTGN-ISEALGIYPNLTFIDLSRNDFYGEISSNW------------------ 141 (708)
Q Consensus 81 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~~~------------------ 141 (708)
++|.+++..+..++++++|++|++++|.++++ .+..|.++++|++|++++|+++++.+..|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 66666555545566666666666666665542 24555556666666655555544332211
Q ss_pred --------------------------------------------------------------------------------
Q 039322 142 -------------------------------------------------------------------------------- 141 (708)
Q Consensus 142 -------------------------------------------------------------------------------- 141 (708)
T Consensus 192 ~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 271 (606)
T 3vq2_A 192 PIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYT 271 (606)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCC
T ss_pred CcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccc
Confidence
Q ss_pred ---------------------------------------------------------------------------CCCCC
Q 039322 142 ---------------------------------------------------------------------------GKCPK 146 (708)
Q Consensus 142 ---------------------------------------------------------------------------~~l~~ 146 (708)
..+++
T Consensus 272 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~ 351 (606)
T 3vq2_A 272 NDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPS 351 (606)
T ss_dssp TTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTT
T ss_pred ccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCC
Confidence 12334
Q ss_pred CCEEEcccCccccc--CCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCC-cccCCCCCCCeEe
Q 039322 147 LGTLNVSMNNITGG--IPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLP-PEIGSLVDLEYLD 223 (708)
Q Consensus 147 L~~L~L~~N~i~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~ 223 (708)
|++|++++|.+++. .+..+..+++|++|++++|.+++ .+..+..+++|++|++++|++.+..+ ..+..+++|++|+
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 430 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLD 430 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEE
T ss_pred CCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEE
Confidence 44455555555433 24555666666666666666663 44667788888888888888887666 5788888999999
Q ss_pred ccCCcccccCCCCCCccccceeecccCccccc-CCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceeccccccc
Q 039322 224 LSANRFNNSVPENLGNLLKLHYLGLSNNQFVL-ELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLS 302 (708)
Q Consensus 224 l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 302 (708)
+++|++++..|..+..+++|+.|++++|++++ ..|..|..+++|+.|++++|.+++..|..+..+++|+.|++++|+++
T Consensus 431 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 510 (606)
T 3vq2_A 431 ISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLL 510 (606)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCC
Confidence 99999988888889999999999999999987 46888999999999999999999888888999999999999999999
Q ss_pred CCCCCcccccccccEEecCCCcCCCCCCCccccc-cCcccccccccCcCCCC
Q 039322 303 GSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFR-NAPVEALKGNKGLCGGV 353 (708)
Q Consensus 303 ~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~-~~~~~~~~~n~~~c~~~ 353 (708)
+..|..+..+++|+.|++++|+++..++....++ .++.+.+.+|||.|+|+
T Consensus 511 ~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 511 FLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 8889999999999999999999997666656665 48999999999999986
No 37
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=357.82 Aligned_cols=259 Identities=20% Similarity=0.276 Sum_probs=209.8
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcch--hHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQ--IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
.+.|++.+.||+|+||.||+|... +|+.||+|++........ ....+.+.+|++++++++||||+++++++..++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 367999999999999999999664 689999999876332111 12367799999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC----cEEEeecc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY----EAHVADFG 587 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 587 (708)
++||||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999999654 3489999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
++....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+.....
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~~~~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANVSAVNY 234 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHHTCC
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--------HHHHHHHHhcCC
Confidence 998765332 33456799999999999988999999999999999999999999864221 111111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
..+.......+..+.+++.+||+.||++|||++|+++|-++
T Consensus 235 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~ 275 (326)
T 2y0a_A 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275 (326)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTT
T ss_pred CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCc
Confidence 11111112233467899999999999999999999998653
No 38
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2e-42 Score=363.41 Aligned_cols=261 Identities=19% Similarity=0.234 Sum_probs=210.3
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCC-cchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLP-CDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
.+.|++.+.||+|+||.||+|.. .+|+.||||++..... .......+.+.+|++++++++||||+++++++.+++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 36799999999999999999965 4689999999853100 000113567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc---EEEeeccc
Q 039322 513 LVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGI 588 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~ 588 (708)
+||||+++|+|.+++.... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998886543 233589999999999999999999999 9999999999999987655 99999999
Q ss_pred ccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 589 AKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
+..............||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ......+......
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~i~~~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---------ERLFEGIIKGKYK 250 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---------HHHHHHHHHTCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---------HHHHHHHHcCCCC
Confidence 9877655444456679999999999999889999999999999999999999997421 1112222222222
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+...+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 251 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~ 289 (351)
T 3c0i_A 251 MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPW 289 (351)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChh
Confidence 222222223456889999999999999999999998754
No 39
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.4e-42 Score=353.03 Aligned_cols=265 Identities=21% Similarity=0.276 Sum_probs=204.7
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|+||.||+|...+|+.||+|++.... ........+.+|++++++++||||+++++++.+++..++|
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA--EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccc--ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 47899999999999999999988889999999997532 2223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++ +|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 98 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 98 FEFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EcCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 999985 8888886543 4589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-------------ccccccc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-------------NTDIALD 660 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-------------~~~~~~~ 660 (708)
.........+|+.|+|||++.+ ..++.++||||+|+++|+|++|+.||........... .......
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence 5455556678999999999876 5689999999999999999999999974322110000 0000000
Q ss_pred cccCCCCCCCC-ch----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPS-RS----VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~-~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.+....... .. ......++.+++.+||+.||++|||++|+++|-+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 303 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 00000000000 00 0111245789999999999999999999999754
No 40
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.3e-42 Score=362.71 Aligned_cols=257 Identities=22% Similarity=0.319 Sum_probs=210.5
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..++|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+++..+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 357899999999999999999965 4689999999975322 2345677899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC---cEEEeecccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY---EAHVADFGIA 589 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~a 589 (708)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++ .+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 9999999999999986543 489999999999999999999999 999999999999998654 5999999999
Q ss_pred cccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+.......
T Consensus 179 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~~~ 249 (362)
T 2bdw_A 179 IEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGAYDY 249 (362)
T ss_dssp BCCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCC
T ss_pred eEecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCC
Confidence 876533 233456799999999999998999999999999999999999999864221 11122222222222
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+...+...+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 22222233456889999999999999999999998754
No 41
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=395.65 Aligned_cols=349 Identities=23% Similarity=0.211 Sum_probs=205.1
Q ss_pred CCCcEEECCCC-cccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCcc--ccCCCCccE
Q 039322 2 RSLSILDLNQN-QFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHN--VCRGGALQY 77 (708)
Q Consensus 2 ~~L~~L~l~~n-~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~--~~~l~~L~~ 77 (708)
++|++|||++| .+..+.+.+|.++++|++|+|++|.+.+..|..|.. ++|+.|++++|.+.+..+.. +..+++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 44555555555 223333555566666666666666665555555544 55666666666665543333 555666666
Q ss_pred EeccCCccccccC-ccCcCCCCCcEEEccCCccccccccccCC-------------------------------------
Q 039322 78 FGVSENHFQGTIP-KILRNCSSLIRVRLNSNNLTGNISEALGI------------------------------------- 119 (708)
Q Consensus 78 L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~~~~~~------------------------------------- 119 (708)
|+|++|.+++..+ ..|+++++|++|+|++|.++++.+..|..
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~ 207 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE 207 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBS
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCcee
Confidence 6666666654433 34556666666666665554322211110
Q ss_pred ---------------------------------------------------------CCCCCEEEcccCcceeeCCCCCC
Q 039322 120 ---------------------------------------------------------YPNLTFIDLSRNDFYGEISSNWG 142 (708)
Q Consensus 120 ---------------------------------------------------------~~~L~~L~l~~n~l~~~~~~~~~ 142 (708)
.++|++|++++|.+.++.+..|.
T Consensus 208 ~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~ 287 (844)
T 3j0a_A 208 ILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFE 287 (844)
T ss_dssp EEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSS
T ss_pred EEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhh
Confidence 13455555555555555555666
Q ss_pred CCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeE
Q 039322 143 KCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYL 222 (708)
Q Consensus 143 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 222 (708)
.+++|+.|+|++|+|+...+..|..+++|++|+|++|++++..+..|..+++|+.|++++|.+++..+..|..+++|++|
T Consensus 288 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 367 (844)
T 3j0a_A 288 TLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTL 367 (844)
T ss_dssp SCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEE
T ss_pred cCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEE
Confidence 66666666666666666666666666667777777666665556666666667777777666665555566666666666
Q ss_pred eccCCcccccCC------------------C----------------------CCCccccceeecccCcccccCC-----
Q 039322 223 DLSANRFNNSVP------------------E----------------------NLGNLLKLHYLGLSNNQFVLEL----- 257 (708)
Q Consensus 223 ~l~~N~i~~~~~------------------~----------------------~~~~l~~L~~L~l~~n~l~~~~----- 257 (708)
+|++|.+++... . .+.++++|+.|+|++|++++..
T Consensus 368 ~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 447 (844)
T 3j0a_A 368 DLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTP 447 (844)
T ss_dssp EEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSS
T ss_pred ECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccc
Confidence 666666553110 0 0113445555555555554221
Q ss_pred -------------------------ChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCccccc
Q 039322 258 -------------------------PKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGI 312 (708)
Q Consensus 258 -------------------------~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l 312 (708)
+..|.++++|+.|+|++|.+++..+..+..+++|+.|+|++|++++..+..+.
T Consensus 448 ~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-- 525 (844)
T 3j0a_A 448 SENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-- 525 (844)
T ss_dssp CSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--
T ss_pred ccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--
Confidence 23345556666666666666666666666666666666666666655555554
Q ss_pred ccccEEecCCCcCCCCCCCccccccCcccccccccCcCCCCC
Q 039322 313 RGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGGVK 354 (708)
Q Consensus 313 ~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 354 (708)
++|+.|++++|++++..|.. +..+..+.+.+|||.|+|+.
T Consensus 526 ~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 526 ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSC
T ss_pred ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccccc
Confidence 56666666666666665543 56788899999999999863
No 42
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.7e-42 Score=356.05 Aligned_cols=254 Identities=23% Similarity=0.404 Sum_probs=204.5
Q ss_pred hccccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.++|++.+.||+|+||.||+|... .+..||||+++... .....+.+.+|++++++++||||+++++++.+++.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 368899999999999999999763 34569999997632 23456789999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 999999999999999996543 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC
Q 039322 591 FLKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 591 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
........ .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+....
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~~~~~~~~~~ 271 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--------RDVISSVEEGY 271 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--------HHHHHHHHTTC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcCC
Confidence 76543322 122345778999999998899999999999999999999 9999864322 11111121111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+... ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 272 ~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 272 RLPAPM---GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCC---CcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111111 12235889999999999999999999999875
No 43
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=364.29 Aligned_cols=254 Identities=22% Similarity=0.326 Sum_probs=204.2
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~ 512 (708)
.++|++.+.||+|+||.||+|..+ +|+.||||++++.. .......+.+..|.++++.+ +||||+++++++.+++..|
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~-~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV-ILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-HHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHH-hcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 478999999999999999999754 68999999987521 01123456788999999988 6999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+..
T Consensus 101 lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 999999999999999654 3489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+..
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~p~~ 246 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDEVVYPTW 246 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCCC
Confidence 4444445567899999999999988899999999999999999999999974321 22223333333322221
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTM------KVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~l~ 707 (708)
....+.+++.+||++||++||++ +|+++|-+
T Consensus 247 ----~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~ 283 (353)
T 3txo_A 247 ----LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPF 283 (353)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGG
T ss_pred ----CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCc
Confidence 12347789999999999999998 88888754
No 44
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.1e-42 Score=364.88 Aligned_cols=262 Identities=23% Similarity=0.315 Sum_probs=208.0
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~ 512 (708)
.++|++.+.||+|+||.||+|+.+ +++.||+|++++.... .....+.+..|..++.++ +||||+++++++.+++..+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 478999999999999999999764 5889999999763211 122345678899999887 8999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++..
T Consensus 130 lV~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 999999999999999754 3489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-ccccccccccCCCCCCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-NTDIALDEILDPRLPPPS 671 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 671 (708)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||+.......... ........+.......+.
T Consensus 204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~ 283 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT
T ss_pred ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC
Confidence 4444455667899999999999999999999999999999999999999974322111111 111122222223322222
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTM------KVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~l~ 707 (708)
. ....+.+++.+||++||++||++ +|+++|-+
T Consensus 284 ~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpf 321 (396)
T 4dc2_A 284 S----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 321 (396)
T ss_dssp T----SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTT
T ss_pred c----CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCcc
Confidence 1 22357889999999999999985 78887754
No 45
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.8e-42 Score=356.96 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=198.1
Q ss_pred hccccccceeccccCccEEEEEe----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.++|++.+.||+|+||.||+|.. .+|+.||+|++++............+.+|++++++++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 37899999999999999999976 47899999999874322233445678899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999996543 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
.............||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~p 241 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--------KKTIDKILKCKLNLP 241 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 654444444556799999999999988899999999999999999999999974321 111222222222222
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
.. ....+.+++.+||+.||++|| +++|+++|-+
T Consensus 242 ~~----~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~ 279 (327)
T 3a62_A 242 PY----LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279 (327)
T ss_dssp TT----SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred CC----CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence 11 123578899999999999999 7889988754
No 46
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.6e-41 Score=382.94 Aligned_cols=351 Identities=21% Similarity=0.243 Sum_probs=308.5
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCC--EEEeeCceeeeeCCCCCCCC-----------------------------
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLK--ELVLLYNNLSGFIPPSLENP----------------------------- 49 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~--~L~L~~n~i~~~~~~~~~~~----------------------------- 49 (708)
+++|++|+|++|+++.+.+..|..+++|+ +|++++|.+.+..|..+...
T Consensus 152 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~ 231 (606)
T 3t6q_A 152 TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLW 231 (606)
T ss_dssp CTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEE
T ss_pred CcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhhee
Confidence 35667777777777766666677777777 67777777776666555432
Q ss_pred -----------------------CcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccC
Q 039322 50 -----------------------MLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNS 106 (708)
Q Consensus 50 -----------------------~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~ 106 (708)
+|+.|++++|.+.+..+..+..+++|++|++++|.++ .+|..+.++++|++|++++
T Consensus 232 ~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~ 310 (606)
T 3t6q_A 232 LGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSA 310 (606)
T ss_dssp CCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTT
T ss_pred chhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECcc
Confidence 5677788888888878888999999999999999999 7788899999999999999
Q ss_pred CccccccccccCCCCCCCEEEcccCccee-eCCCCCCCCCCCCEEEcccCcccccC--CccccCCCCCCEEecccccccc
Q 039322 107 NNLTGNISEALGIYPNLTFIDLSRNDFYG-EISSNWGKCPKLGTLNVSMNNITGGI--PREIGNSSQLQALDLSLNHIVG 183 (708)
Q Consensus 107 n~i~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~L~~n~l~~ 183 (708)
|.++++.+..+..+++|++|++++|.+.+ +.+..+..+++|++|++++|.+++.. +..+..+++|++|++++|++.+
T Consensus 311 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 390 (606)
T 3t6q_A 311 NKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLS 390 (606)
T ss_dssp CCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEE
T ss_pred CCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCc
Confidence 99999989999999999999999999874 55566899999999999999999766 7789999999999999999998
Q ss_pred cCCcccCCCCCCCEEEccCccccccCCcc-cCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccC---CCh
Q 039322 184 EIPKELGKLNSLTELILRGNQFTGRLPPE-IGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLE---LPK 259 (708)
Q Consensus 184 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~ 259 (708)
..+..+..+++|++|++++|++++..+.. +..+++|++|++++|.+++..+..+..+++|+.|++++|++++. .+.
T Consensus 391 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 470 (606)
T 3t6q_A 391 LKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTN 470 (606)
T ss_dssp ECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSC
T ss_pred CCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccch
Confidence 88899999999999999999999776544 89999999999999999988899999999999999999999862 346
Q ss_pred hhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCC-ccccccC
Q 039322 260 ELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN-STAFRNA 338 (708)
Q Consensus 260 ~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~ 338 (708)
.+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..|..+..++.| .|++++|++++.+|. ...++.+
T Consensus 471 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L 549 (606)
T 3t6q_A 471 SLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQ 549 (606)
T ss_dssp GGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTS
T ss_pred hhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCC
Confidence 79999999999999999998889999999999999999999999999999999999 999999999998776 3567889
Q ss_pred cccccccccCcCCCC
Q 039322 339 PVEALKGNKGLCGGV 353 (708)
Q Consensus 339 ~~~~~~~n~~~c~~~ 353 (708)
+.+.+.+|||.|+|+
T Consensus 550 ~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 550 RTINLRQNPLDCTCS 564 (606)
T ss_dssp SEEECTTCCEECSGG
T ss_pred CEEeCCCCCccccCC
Confidence 999999999999885
No 47
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.5e-42 Score=346.01 Aligned_cols=252 Identities=25% Similarity=0.426 Sum_probs=207.5
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|+||.||+|...++..||+|+++... ...+++.+|++++++++||||+++++++.+++..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-----MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-----BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-----CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence 47899999999999999999998888899999997532 2346789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred EEccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 99999999999996543 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 595 ESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 595 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.... .....+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||+..... .....+........+.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 228 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--------EVVLKVSQGHRLYRPH 228 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCCCCCCT
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--------HHHHHHHcCCCCCCCC
Confidence 3222 223445678999999998889999999999999999999 99998743221 1111111111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. +..+.+++.+||+.||++|||++|++++|+
T Consensus 229 ~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (268)
T 3sxs_A 229 LA---SDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260 (268)
T ss_dssp TS---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHG
T ss_pred cC---hHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 235888999999999999999999999985
No 48
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.4e-42 Score=347.41 Aligned_cols=251 Identities=24% Similarity=0.404 Sum_probs=206.9
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-----cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 6899999999999999999998889999999998632 23467899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999996543 3589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 596 SS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 596 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.. ......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||..... ......+........+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 231 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGFRLYKPRL 231 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCCCCCCTT
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhcCccCCCCCc
Confidence 21 1233456778999999998899999999999999999999 9999874322 111111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.||++|||++|++++|+
T Consensus 232 ---~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 232 ---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1235788999999999999999999999985
No 49
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=352.00 Aligned_cols=264 Identities=21% Similarity=0.292 Sum_probs=209.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC--eeE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR--HSF 512 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~ 512 (708)
++|.+.+.||+|+||.||+|... +++.||||++.... .....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS---FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG---GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc---ccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 68999999999999999999765 58999999987521 2234567889999999999999999999998765 789
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee----CCCCcEEEeeccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL----DLEYEAHVADFGI 588 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~ 588 (708)
+||||+++|+|.+++........+++..++.++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999998766555589999999999999999999999 99999999999999 7778899999999
Q ss_pred ccccCCCCCccccccccccccCccccc--------cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccc----
Q 039322 589 AKFLKPESSNWTEFAGTYGYVAPELAY--------TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD---- 656 (708)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~---- 656 (708)
++...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||..............
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 98765443 334567899999999876 46788999999999999999999999863221100000000
Q ss_pred -------cccc------cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 039322 657 -------IALD------EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQV 706 (708)
Q Consensus 657 -------~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 706 (708)
.... ....+.++............+.+++.+||+.||++|||++|++++.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 0000 0011122332333455666788999999999999999999999985
No 50
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.5e-42 Score=355.95 Aligned_cols=263 Identities=24% Similarity=0.359 Sum_probs=203.9
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC----e
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR----H 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----~ 510 (708)
.++|++.+.||+|+||.||+|... ++.||||++... ......+..|+.++++++||||+++++++..+. .
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence 378999999999999999999875 889999998642 233455667899999999999999999998754 4
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhC-------CCCCeEEccCCCCCeeeCCCCcEEE
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD-------CFPPIVHQDISSKNLLLDLEYEAHV 583 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-------~~~~ivH~dlk~~Nill~~~~~~kl 583 (708)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +.++|+||||||+||+++.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 69999999999999999653 389999999999999999999986 2348999999999999999999999
Q ss_pred eecccccccCCCCCc--cccccccccccCccccccC-----CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc---
Q 039322 584 ADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTM-----KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL--- 653 (708)
Q Consensus 584 ~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~--- 653 (708)
+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||+||+.||...........
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 999999876543322 2345789999999998763 456688999999999999999999874322110000
Q ss_pred -----ccccccccccCCCCCCCC-c--hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 -----NTDIALDEILDPRLPPPS-R--SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 -----~~~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...............+.. . .....+..+.+++.+||+.||++|||++|+++.|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 001111111111111111 1 12234556899999999999999999999999885
No 51
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.3e-42 Score=351.90 Aligned_cols=258 Identities=26% Similarity=0.374 Sum_probs=203.4
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.. .+++.||+|.+..... ......+.+.+|++++++++||||+++++++..++..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 36899999999999999999965 4689999999865322 233456789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 89 v~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 999999999999997543 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC-C
Q 039322 594 PESS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP-S 671 (708)
Q Consensus 594 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 671 (708)
.... ......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||+...... .... ......+.. .
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-------~~~~-~~~~~~~~~~~ 234 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS-------IAIK-HIQDSVPNVTT 234 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH-------HHHH-HHSSCCCCHHH
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-------HHHH-HhhccCCCcch
Confidence 4322 2334568999999999999999999999999999999999999997432211 0011 111111110 0
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRP-TMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~l~ 707 (708)
......+..+.+++.+||++||++|| +++++.+.|+
T Consensus 235 ~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 235 DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 01112234688999999999999999 8888887764
No 52
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.5e-42 Score=356.70 Aligned_cols=254 Identities=23% Similarity=0.319 Sum_probs=189.7
Q ss_pred cceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEEEEEec
Q 039322 441 QYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFLVYELL 518 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~ 518 (708)
.+.||+|+||.||+|... +++.||||++.. .....+.+|+++++.+. ||||+++++++.+++..++||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK-------RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG-------GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh-------hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc
Confidence 378999999999999664 689999999864 23566788999999997 999999999999999999999999
Q ss_pred cCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC---cEEEeecccccccCCC
Q 039322 519 ERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY---EAHVADFGIAKFLKPE 595 (708)
Q Consensus 519 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~a~~~~~~ 595 (708)
++|+|.+++... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||++......
T Consensus 89 ~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 89 NGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999999999764 3489999999999999999999999 999999999999998765 8999999999877655
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
........+|+.|+|||++.+..++.++||||+|+++|+|++|+.||........ ..........+...........+.
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~ 241 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGDFSFEGEAWK 241 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHH
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCCCCCCccccc
Confidence 5555667789999999999999999999999999999999999999974322110 111122334444555544444444
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
..+..+.+++.+||+.||++|||++|+++|-++
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~ 274 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGG
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHhcChhh
Confidence 455678999999999999999999999987553
No 53
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1e-41 Score=356.04 Aligned_cols=254 Identities=20% Similarity=0.375 Sum_probs=206.5
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR---- 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~---- 509 (708)
.++|++.+.||+|+||.||+|... +|+.||||+++... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 478999999999999999999765 79999999997532 2234678999999999999999999999986543
Q ss_pred -----------------------------------------------------eeEEEEEeccCCCHHHHhcccccccCC
Q 039322 510 -----------------------------------------------------HSFLVYELLERGSLAAILSSDTAAQEL 536 (708)
Q Consensus 510 -----------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~l 536 (708)
..++||||+++|+|.+++.........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 379999999999999999877666667
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCC------------ccccccc
Q 039322 537 GWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESS------------NWTEFAG 604 (708)
Q Consensus 537 ~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~ 604 (708)
++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++........ ......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 8888999999999999999999 999999999999999999999999999987754421 1233568
Q ss_pred cccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHH
Q 039322 605 TYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEV 684 (708)
Q Consensus 605 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 684 (708)
|+.|+|||++.+..++.++||||+|+++|||++|..|+... ............ +.........+.++
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----------VRIITDVRNLKF---PLLFTQKYPQEHMM 305 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----------HHHHHHHHTTCC---CHHHHHHCHHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----------HHHHHHhhccCC---CcccccCChhHHHH
Confidence 99999999999989999999999999999999998875311 111111122221 12233444567899
Q ss_pred HHhccCCCCCCCCCHHHHHHHhh
Q 039322 685 AFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 685 i~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+||+.||++|||++|++++-+
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~~~ 328 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIENAI 328 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHSTT
T ss_pred HHHHccCCCCcCCCHHHHhhchh
Confidence 99999999999999999999754
No 54
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=360.93 Aligned_cols=256 Identities=19% Similarity=0.283 Sum_probs=208.4
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.. .+|+.||+|++... .......+.+|++++++++||||+++++++.+++..++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP----YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc----chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 36899999999999999999965 46899999998753 22345678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC--CCcEEEeecccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL--EYEAHVADFGIAKF 591 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~a~~ 591 (708)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||++..
T Consensus 126 v~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp EEECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EEEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccccee
Confidence 999999999999996543 3589999999999999999999999 9999999999999974 47799999999987
Q ss_pred cCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.........
T Consensus 201 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~i~~~~~~~~~ 271 (387)
T 1kob_A 201 LNPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--------ETLQNVKRCDWEFDE 271 (387)
T ss_dssp CCTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHHCCCCCCS
T ss_pred cCCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCc
Confidence 65432 334557999999999999989999999999999999999999999743211 111111111111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.........+.+++.+||+.||++|||++|+++|-++
T Consensus 272 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 308 (387)
T 1kob_A 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308 (387)
T ss_dssp STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTT
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccc
Confidence 1111223458899999999999999999999998553
No 55
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7.6e-42 Score=351.84 Aligned_cols=254 Identities=25% Similarity=0.396 Sum_probs=198.0
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHh--ccCCceeeEEEEEeeC----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE--IRHRNIVKFYGFCSHA---- 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~~iv~l~~~~~~~---- 508 (708)
.++|++.+.||+|+||.||+|.. +++.||||++.. .....+..|.+++.. ++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~-------~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS-------RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG-------GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc-------ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 47899999999999999999987 689999999864 234556667777666 7899999999987543
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEccCCCCCeeeCCCCc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH--------HDCFPPIVHQDISSKNLLLDLEYE 580 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh--------~~~~~~ivH~dlk~~Nill~~~~~ 580 (708)
...++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 4689999999999999999543 4899999999999999999999 77 9999999999999999999
Q ss_pred EEEeecccccccCCCCCc----cccccccccccCccccccC------CCCcchhHHHHHHHHHHHHhC----------CC
Q 039322 581 AHVADFGIAKFLKPESSN----WTEFAGTYGYVAPELAYTM------KITEKCDVYSFGVLVLEAIKG----------KH 640 (708)
Q Consensus 581 ~kl~Dfg~a~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~elltg----------~~ 640 (708)
+||+|||+++........ .....||+.|+|||++.+. .++.++||||||+++|||++| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 999999999866543332 2234789999999998876 455789999999999999999 67
Q ss_pred CCCcccccccccccccccccc--ccCCCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 641 PRDFLSLISSSSLNTDIALDE--ILDPRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 641 p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
||........ ....... ..+...+..+ .........+.+++.+||+.||++|||++|+++.|+
T Consensus 232 pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 232 PFYDVVPNDP----SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp TTTTTSCSSC----CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cccccCCCCc----chhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 7643211100 0001111 1111111111 122345667999999999999999999999999885
No 56
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1e-41 Score=356.33 Aligned_cols=261 Identities=23% Similarity=0.321 Sum_probs=208.8
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~l 513 (708)
++|++.+.||+|+||.||+|..+ +++.||+|++++... ......+.+.+|..+++++ +||||+++++++.+++..++
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 68999999999999999999764 688999999976322 2234456788999999988 89999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 88 v~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999999654 3489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-cccccccccccCCCCCCCCc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-LNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 672 (708)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||.......... .........+.......+..
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 241 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 241 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTT
T ss_pred CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCC
Confidence 44444556789999999999999899999999999999999999999997432211110 01111112222222222211
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTM------KVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~l~ 707 (708)
....+.+++.+||+.||++||++ +|+++|-+
T Consensus 242 ----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~ 278 (345)
T 3a8x_A 242 ----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 278 (345)
T ss_dssp ----SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGG
T ss_pred ----CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCc
Confidence 22357889999999999999995 78887643
No 57
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.9e-42 Score=364.15 Aligned_cols=253 Identities=24% Similarity=0.400 Sum_probs=205.9
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|.+.+.||+|+||.||+|... +++.||||+++... .....+.+.+|++++++++||||+++++++..++..++
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS---CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 478999999999999999999775 78999999987532 22345678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++...
T Consensus 190 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999999997543 3589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCcc--ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCC
Q 039322 594 PESSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RLPP 669 (708)
Q Consensus 594 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 669 (708)
...... ....+++.|+|||.+.++.++.++||||||+++|||+| |..||...... .....+... +.+.
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~ 336 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--------QTREFVEKGGRLPC 336 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--------HHHHHHHTTCCCCC
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCC
Confidence 321111 12235778999999998899999999999999999998 99998743221 111111111 1111
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+ .. .+..+.+++.+||+.||++|||++++++.|+
T Consensus 337 ~-~~---~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 337 P-EL---CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp C-TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C-CC---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1 11 1235788999999999999999999999874
No 58
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.6e-42 Score=356.79 Aligned_cols=252 Identities=21% Similarity=0.295 Sum_probs=203.9
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|.+.+.||+|+||.||+|.. .+++.||+|++..... ........+.+|+++++.++||||+++++++..++..++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLL-KKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHc-cchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 37899999999999999999975 5789999999864210 011123578899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+ +|+|.+++... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 87 v~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999 67999988654 3489999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.. .......||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||+.... ......+.......+..
T Consensus 160 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~~ 230 (336)
T 3h4j_B 160 DG-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI--------PNLFKKVNSCVYVMPDF 230 (336)
T ss_dssp TS-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS--------TTCBCCCCSSCCCCCTT
T ss_pred CC-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHcCCCCCccc
Confidence 43 23345679999999999988775 6899999999999999999999974221 11111111111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+..+.+++.+||+.||++|||++|+++|-+
T Consensus 231 ----~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 231 ----LSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp ----SCHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred ----CCHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 1235788999999999999999999998754
No 59
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.1e-42 Score=358.54 Aligned_cols=256 Identities=24% Similarity=0.317 Sum_probs=207.3
Q ss_pred HHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCe
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARH 510 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~ 510 (708)
...++|++.+.||+|+||.||+|..+ +|+.||+|++++... ......+.+..|.++++.+ +||||+++++++.+++.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh-hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 34589999999999999999999764 688999999875210 0112355678899999887 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.|+||||+++|+|.+++... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 99999999999999999754 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
.............||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p 238 (345)
T 1xjd_A 167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--------EELFHSIRMDNPFYP 238 (345)
T ss_dssp CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCC
T ss_pred hcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 654444445567899999999999998999999999999999999999999974321 111122221121111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHH-HHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMK-VVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~l~ 707 (708)
.. ....+.+++.+||+.||++||++. |+++|-+
T Consensus 239 ~~----~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~ 272 (345)
T 1xjd_A 239 RW----LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL 272 (345)
T ss_dssp TT----SCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGG
T ss_pred cc----cCHHHHHHHHHHhcCCHhHcCCChHHHHcCcc
Confidence 11 123578899999999999999998 8877643
No 60
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=9.3e-42 Score=360.84 Aligned_cols=253 Identities=23% Similarity=0.443 Sum_probs=195.2
Q ss_pred hccccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
..+|++.+.||+|+||.||+|... ++..||||+++... .....+.+.+|++++++++||||+++++++.+++.
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc
Confidence 368999999999999999999764 57789999997632 23456789999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 999999999999999997543 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcc---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-
Q 039322 591 FLKPESSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP- 665 (708)
Q Consensus 591 ~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~- 665 (708)
......... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--------~~~~~i~~~~ 267 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--------DVIKAVDEGY 267 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--------HHHHHHHTTE
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCC
Confidence 765432221 22335678999999999999999999999999999998 99998643211 111111111
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.+. ..+..+.+++.+||+.||++||+++||++.|+
T Consensus 268 ~~~~~~----~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 268 RLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp ECCCCT----TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCc----cccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 111111 12345889999999999999999999999874
No 61
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.3e-42 Score=350.88 Aligned_cols=256 Identities=22% Similarity=0.323 Sum_probs=199.7
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcch----------------------hHhHHHHHHHHHHHH
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQ----------------------IADQKEFLIEVKALT 491 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~e~~~l~ 491 (708)
.++|++.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 37899999999999999999965 4688999999875321110 112356889999999
Q ss_pred hccCCceeeEEEEEee--CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCC
Q 039322 492 EIRHRNIVKFYGFCSH--ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDIS 569 (708)
Q Consensus 492 ~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 569 (708)
+++||||+++++++.+ .+..++||||+++|+|.+++.. ..+++..++.++.|++.||+|||++ ||+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999987 5688999999999999886543 3489999999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEeecccccccCCCCCccccccccccccCccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCccc
Q 039322 570 SKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK---ITEKCDVYSFGVLVLEAIKGKHPRDFLS 646 (708)
Q Consensus 570 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~elltg~~p~~~~~ 646 (708)
|+||+++.++.+||+|||++..............||+.|+|||.+.+.. .+.++||||||+++|+|++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999987765544445667999999999987655 3778999999999999999999997432
Q ss_pred cccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 647 LISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
... ....+.......+. ....+..+.+++.+||+.||++|||++|+++|-+
T Consensus 245 ~~~--------~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~ 295 (298)
T 2zv2_A 245 IMC--------LHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295 (298)
T ss_dssp HHH--------HHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred HHH--------HHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence 111 01111111111110 0011235889999999999999999999998754
No 62
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.3e-42 Score=353.96 Aligned_cols=256 Identities=24% Similarity=0.331 Sum_probs=204.2
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccc---ccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 378999999999999999999654 78999999986532 12234668899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++..+.
T Consensus 83 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 999999999999996543 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC--CccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 594 PES--SNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 594 ~~~--~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
... .......||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||+..... ......+........
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~~ 229 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-------CQEYSDWKEKKTYLN 229 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT-------SHHHHHHHTTCTTST
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH-------HHHHHHHhcccccCC
Confidence 322 22345678999999999987775 67899999999999999999999743211 011111111111111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
........+.+++.+||+.||++|||++|++++-++
T Consensus 230 --~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~ 265 (323)
T 3tki_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265 (323)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred --ccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence 111223457789999999999999999999987653
No 63
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-41 Score=350.52 Aligned_cols=251 Identities=23% Similarity=0.336 Sum_probs=207.0
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +|+.||+|++++.. .......+.+.+|..+++.++||||+++++++.+.+..++
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI-VVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-HHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-hhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 378999999999999999999664 69999999987521 0111235678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 84 v~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp EECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999999997543 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......+.......+..
T Consensus 158 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~~p~~- 225 (318)
T 1fot_A 158 D---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--------MKTYEKILNAELRFPPF- 225 (318)
T ss_dssp S---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHCCCCCCTT-
T ss_pred C---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCCC-
Confidence 3 22345789999999999999999999999999999999999999964221 11222222222222211
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
....+.+++.+|++.||++|| +++|+++|-+
T Consensus 226 ---~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 226 ---FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261 (318)
T ss_dssp ---SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred ---CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcc
Confidence 123578899999999999999 8999998754
No 64
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9.3e-42 Score=345.48 Aligned_cols=255 Identities=27% Similarity=0.422 Sum_probs=193.4
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|+||.||+|... ++.||||+++...........+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 368999999999999999999874 8899999987643333234457899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC--------CCcEEEeec
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL--------EYEAHVADF 586 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Df 586 (708)
|||+++++|.+++.. ..+++..++.++.|++.||+|||++...+++||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999864 34899999999999999999999992112999999999999986 678999999
Q ss_pred ccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
|++....... .....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||....... .........
T Consensus 161 g~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~ 230 (271)
T 3dtc_A 161 GLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--------VAYGVAMNK 230 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--------HHHHHHTSC
T ss_pred Cccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHhhhcCC
Confidence 9998654332 234578999999999999889999999999999999999999997432111 111111111
Q ss_pred CC-CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LP-PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. +... ..+..+.+++.+||+.||++|||++|++++|+
T Consensus 231 ~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 231 LALPIPS---TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp CCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCc---ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 11 1111 11235889999999999999999999999985
No 65
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6e-42 Score=350.02 Aligned_cols=264 Identities=23% Similarity=0.329 Sum_probs=201.6
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
++|++.+.||+|+||.||+|...+|+.||+|++.... ......+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEK--EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSS--GGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccc--cccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 5789999999999999999988889999999997532 22223467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++ +|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp ECCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 99986 9999886543 4589999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc----------ccccccc--cc
Q 039322 596 SSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL----------NTDIALD--EI 662 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~----------~~~~~~~--~~ 662 (708)
........+|+.|+|||++.+. .++.++||||+|+++|||++|+.||........... ....... ..
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc
Confidence 4444556789999999998764 589999999999999999999999974321100000 0000000 00
Q ss_pred cCCCCCC----C-CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 663 LDPRLPP----P-SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 663 ~~~~~~~----~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.++.... + ..........+.+++.+||+.||++|||++|+++|-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 283 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 0111100 0 0000112345789999999999999999999998855
No 66
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=356.84 Aligned_cols=254 Identities=23% Similarity=0.322 Sum_probs=193.2
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||||+++.. ...+.+.+|++++++++||||+++++++..++..++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT------VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc------hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 477999999999999999999765 5889999999753 234568889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---CCcEEEeeccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL---EYEAHVADFGIAK 590 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~a~ 590 (708)
||||+++|+|.+++.... .+++.+++.++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 999999999999996543 489999999999999999999999 9999999999999975 8899999999998
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......+........
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~~i~~~~~~~~ 271 (349)
T 2w4o_A 200 IVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG-------DQFMFRRILNCEYYFI 271 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-------HHHHHHHHHTTCCCCC
T ss_pred ccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc-------cHHHHHHHHhCCCccC
Confidence 65432 223456789999999999998999999999999999999999999863221 1112222222222222
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
..........+.+++.+||+.||++|||+.|+++|-++
T Consensus 272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~ 309 (349)
T 2w4o_A 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309 (349)
T ss_dssp TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 11222234468899999999999999999999998553
No 67
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.6e-41 Score=345.98 Aligned_cols=252 Identities=23% Similarity=0.415 Sum_probs=204.3
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|+||.||+|...++..||+|++.... ...+++.+|++++++++||||+++++++.+++..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-----MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-----CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 47899999999999999999998888899999998632 2346789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 98 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 98 TEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp ECCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999997533 4589999999999999999999999 999999999999999999999999999986543
Q ss_pred CCC-ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 595 ESS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 595 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
... ......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||...... .....+........+.
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 244 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQGLRLYRPH 244 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCCCCCCT
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhcccCCCCCC
Confidence 211 1223446788999999998899999999999999999998 99998743221 1111111111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ...+.+++.+||+.||++|||++|++++|+
T Consensus 245 ~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 245 LA---SEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp TC---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 11 235888999999999999999999999985
No 68
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.3e-41 Score=347.36 Aligned_cols=257 Identities=23% Similarity=0.360 Sum_probs=199.4
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|.+.+.||+|+||.||+|... ..+|+|+++... ......+.+.+|++++++++||||+++++++.. +..++|
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv 109 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCC--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEE
Confidence 378999999999999999999864 368999987532 233456789999999999999999999998754 568899
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred EecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 99999999999996443 4589999999999999999999999 999999999999999999999999999986542
Q ss_pred C--CCccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 595 E--SSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 595 ~--~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
. ........||+.|+|||.+. +..++.++||||||+++|||++|+.||......... ..........+....
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~ 261 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI---IFMVGRGYASPDLSK 261 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH---HHHHHHTCCCCCSTT
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH---HHHHhcCCCCcchhh
Confidence 2 22234567899999999886 566888999999999999999999999743211100 000001111111111
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ...+..+.+++.+||+.||++|||+.|++++|+
T Consensus 262 ~~---~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 262 LY---KNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp SC---SSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred hh---cCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 11 112345889999999999999999999999886
No 69
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=358.84 Aligned_cols=251 Identities=21% Similarity=0.280 Sum_probs=200.7
Q ss_pred cccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEe
Q 039322 439 DAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 439 ~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
...+.||+|+||.||+|.. .+|+.||+|+++.. .....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~ 167 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR----GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY 167 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc----ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 3466899999999999965 56899999998763 234567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee--CCCCcEEEeecccccccCCC
Q 039322 518 LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL--DLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 518 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfg~a~~~~~~ 595 (708)
+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 168 ~~~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~ 242 (373)
T 2x4f_A 168 VDGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242 (373)
T ss_dssp CTTCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred CCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence 99999999886433 3589999999999999999999999 99999999999999 56789999999999876543
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhH
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQ 675 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (708)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.....
T Consensus 243 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------~~~~~~i~~~~~~~~~~~~~ 313 (373)
T 2x4f_A 243 E-KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--------AETLNNILACRWDLEDEEFQ 313 (373)
T ss_dssp C-BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCCCSCSGGGT
T ss_pred c-ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhccCCCChhhhc
Confidence 2 33445799999999999988899999999999999999999999974321 11222222222222222222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 676 EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 676 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+.+++.+||+.||++|||++|+++|-+
T Consensus 314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~ 345 (373)
T 2x4f_A 314 DISEEAKEFISKLLIKEKSWRISASEALKHPW 345 (373)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHhcCcC
Confidence 23446889999999999999999999998754
No 70
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=358.32 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=206.0
Q ss_pred hccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
.++|++.+.||+|+||.||+|... +++.||||+++... .......+.+|+.++++++||||+++++++..+
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc---ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 368999999999999999999743 46789999997532 234456788999999999999999999999999
Q ss_pred CeeEEEEEeccCCCHHHHhcccc----cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC---cE
Q 039322 509 RHSFLVYELLERGSLAAILSSDT----AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY---EA 581 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~ 581 (708)
+..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||++ ||+||||||+|||++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999997543 123589999999999999999999999 999999999999999555 59
Q ss_pred EEeecccccccCCCC--CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccc
Q 039322 582 HVADFGIAKFLKPES--SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIA 658 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 658 (708)
||+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ...
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--------~~~ 295 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEV 295 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHH
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHH
Confidence 999999997543221 22234567899999999999999999999999999999998 9999874321 111
Q ss_pred cccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+............ +..+.+++.+||+.||++|||++|++++|+
T Consensus 296 ~~~i~~~~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 296 LEFVTSGGRMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HHHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHcCCCCCCCccC---CHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2222222211111111 235788999999999999999999999986
No 71
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=357.58 Aligned_cols=256 Identities=22% Similarity=0.367 Sum_probs=208.7
Q ss_pred hccccccceeccccCccEEEEEeC--------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP--------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC 505 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~ 505 (708)
.++|.+.+.||+|+||.||+|... .++.||||+++... .....+.+.+|+++++++ +||||+++++++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 478999999999999999999642 34579999997642 234567899999999999 899999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDTA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 572 (708)
..++..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ +|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcce
Confidence 999999999999999999999976432 24589999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccc
Q 039322 573 LLLDLEYEAHVADFGIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLIS 649 (708)
Q Consensus 573 ill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~ 649 (708)
|+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-- 299 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-- 299 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999987654332 2234557889999999999999999999999999999999 9999874321
Q ss_pred ccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+........+.. ....+.+++.+||+.||++|||++|++++|+
T Consensus 300 ------~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 300 ------EELFKLLKEGHRMDKPSN---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp ------HHHHHHHHTTCCCCCCSS---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------HHHHHHHHcCCCCCCCcc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111111111111111 1235888999999999999999999999885
No 72
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.6e-41 Score=344.25 Aligned_cols=264 Identities=19% Similarity=0.258 Sum_probs=203.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +++.||+|++..... .......+.+|++++++++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence 57999999999999999999664 689999999976432 223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++ ++.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 999986 6666554322 4589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccc-----------cccccccccccc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS-----------SSLNTDIALDEI 662 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~-----------~~~~~~~~~~~~ 662 (708)
.........+|+.|+|||++.+.. ++.++||||+|+++|||++|+.||........ ............
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 555556678899999999988766 79999999999999999999888532111000 000000000000
Q ss_pred cCC-------CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 663 LDP-------RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 663 ~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+. ...............+.+++.+||+.||++|||++|+++|-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 285 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcc
Confidence 000 000000011122345789999999999999999999999854
No 73
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.8e-41 Score=368.89 Aligned_cols=352 Identities=18% Similarity=0.158 Sum_probs=234.8
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeee-CCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEe
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGF-IPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFG 79 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 79 (708)
++|++|+|++|+|+++.+..|+++++|++|+|++|.+.+. .+..+.. ++|+.|++++|.+.+..|..+..+++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 5789999999999998899999999999999999988644 4556655 8899999999999988899999999999999
Q ss_pred ccCCccccccCcc--CcCCCCCcEEEccCCccccccccc-cCCCCCCCEEEcccCcceeeCCCCCCCC--CCCCEEEccc
Q 039322 80 VSENHFQGTIPKI--LRNCSSLIRVRLNSNNLTGNISEA-LGIYPNLTFIDLSRNDFYGEISSNWGKC--PKLGTLNVSM 154 (708)
Q Consensus 80 l~~n~i~~~~~~~--~~~l~~L~~L~l~~n~i~~~~~~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~ 154 (708)
+++|.+++..+.. |.++++|++|+|++|+++++.+.. |..+++|++|++++|+++++.+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999998755444 889999999999999999887665 8899999999999999988888888766 6788888888
Q ss_pred CcccccCCcc--------ccCCCCCCEEecccccccccCCcccCCC---CCCCEEEccCcccccc----------CCccc
Q 039322 155 NNITGGIPRE--------IGNSSQLQALDLSLNHIVGEIPKELGKL---NSLTELILRGNQFTGR----------LPPEI 213 (708)
Q Consensus 155 N~i~~~~~~~--------~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~l~~n~l~~~----------~~~~~ 213 (708)
|.+....+.. +..+++|++|++++|++++..+..+... ++|+.|++++|.+.+. .+..+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 8887655443 2355788888888888876555443322 4455555554433211 01111
Q ss_pred CC--CCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccC
Q 039322 214 GS--LVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSL 291 (708)
Q Consensus 214 ~~--~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L 291 (708)
.. .++|++|++++|.+++..|..+..+++|+.|++++|++++..+..|.++++|+.|+|++|.+++..+..+..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 11 1345555555555555455555555555555555555554445555555555555555555554444455555555
Q ss_pred CceecccccccCCCCCcccccccccEEecCCCcCCCCCCCc-cccccCcccccccccCcCCCC
Q 039322 292 EKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNS-TAFRNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 292 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 353 (708)
+.|++++|++++..|..+..+++|+.|++++|++++.++.. ..++.++.+.+.+|++.|+|+
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 55555555555444555555555555555555555444332 234445555555555555554
No 74
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.4e-41 Score=353.93 Aligned_cols=250 Identities=20% Similarity=0.245 Sum_probs=207.4
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +|+.||+|++.+.. .......+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK-VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-HHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHH-hccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 78999999999999999999764 68999999986421 01112356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999997543 489999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+..
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~~-- 260 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--------IQIYEKIVSGKVRFPSH-- 260 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT--
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--------HHHHHHHHcCCCCCCCC--
Confidence 2 2346799999999999998999999999999999999999999974221 12222222222222211
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPT-----MKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~ 707 (708)
....+.+++.+||+.||++||+ ++|+++|-+
T Consensus 261 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred --CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 1235789999999999999998 999988754
No 75
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-41 Score=355.31 Aligned_cols=259 Identities=22% Similarity=0.390 Sum_probs=209.6
Q ss_pred HHHhccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEE
Q 039322 432 VRATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFC 505 (708)
Q Consensus 432 ~~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~ 505 (708)
....++|++.+.||+|+||.||+|... +++.||||+++... .....+.+.+|++++++++||||+++++++
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 119 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVC 119 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 344589999999999999999999764 34789999997632 234467899999999999999999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhccccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDTA---------------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIV 564 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iv 564 (708)
.+++..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ ||+
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~iv 196 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 196 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 999999999999999999999976431 14689999999999999999999999 999
Q ss_pred EccCCCCCeeeCCCCcEEEeecccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCC
Q 039322 565 HQDISSKNLLLDLEYEAHVADFGIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHP 641 (708)
Q Consensus 565 H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p 641 (708)
||||||+||+++.++.+||+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.|
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999986543221 2234567889999999998899999999999999999999 9999
Q ss_pred CCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 642 RDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
|..... ......+.+......+.. .+..+.+++.+||+.||++|||++|++++|+
T Consensus 277 ~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 277 YYGMAH--------EEVIYYVRDGNILACPEN---CPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp TTTSCH--------HHHHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCh--------HHHHHHHhCCCcCCCCCC---CCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 874321 111222222222221111 2235889999999999999999999999875
No 76
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.3e-41 Score=355.86 Aligned_cols=254 Identities=20% Similarity=0.289 Sum_probs=208.1
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~ 512 (708)
.++|++.+.||+|+||.||+|..+ +|+.||+|++++... ......+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 478999999999999999999765 478999999875210 0112356788899999988 7999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 9999999999999997543 489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+..
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~p~~ 243 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPKS 243 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCCCCCCCC
Confidence 4444445567899999999999999999999999999999999999999974221 12222233222222211
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPT-----MKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~ 707 (708)
....+.+++.+||++||++||+ ++|+++|-+
T Consensus 244 ----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~ 279 (353)
T 2i0e_A 244 ----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 279 (353)
T ss_dssp ----SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGG
T ss_pred ----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCcc
Confidence 2235788999999999999995 688887743
No 77
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.1e-41 Score=359.90 Aligned_cols=264 Identities=20% Similarity=0.344 Sum_probs=208.9
Q ss_pred HHHHHHHhccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceee
Q 039322 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVK 500 (708)
Q Consensus 428 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~ 500 (708)
..++....++|++.+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|+++++++ +||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCcceee
Confidence 344555678999999999999999999963 346789999997632 234457799999999999 7899999
Q ss_pred EEEEEeeCC-eeEEEEEeccCCCHHHHhccccc-----------------------------------------------
Q 039322 501 FYGFCSHAR-HSFLVYELLERGSLAAILSSDTA----------------------------------------------- 532 (708)
Q Consensus 501 l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------- 532 (708)
+++++.+++ ..++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999998765 48999999999999999976532
Q ss_pred ----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 039322 533 ----------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPES 596 (708)
Q Consensus 533 ----------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 596 (708)
...+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 11288999999999999999999999 99999999999999999999999999998664433
Q ss_pred C--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 597 S--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 597 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
. ......+|+.|+|||++.+..++.++||||||+++|||+| |+.||....... .....+........+..
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~ 320 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDY 320 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-------HHHHHHHHTCCCCCCTT
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-------HHHHHHHcCCCCCCCCC
Confidence 2 2334568899999999999999999999999999999998 999987432110 01111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.||++|||++|++++|+
T Consensus 321 ---~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 321 ---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 1235788999999999999999999999985
No 78
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=355.78 Aligned_cols=256 Identities=24% Similarity=0.357 Sum_probs=205.3
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||+|++.+.. .........+.+|++++++++||||+++++++.+++..++
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~-~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQK-CVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHH-HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhh-cccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 378999999999999999999654 68899999986421 0112235678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+.+|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 999999999999997543 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccccccccccCcccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 594 PESSNWTEFAGTYGYVAPELAYT---MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .......+.......+
T Consensus 167 ~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-----~~~~~~~~~~~~~~~p 240 (384)
T 4fr4_A 167 RE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-----SKEIVHTFETTVVTYP 240 (384)
T ss_dssp TT-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-----HHHHHHHHHHCCCCCC
T ss_pred CC-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc-----HHHHHHHHhhcccCCC
Confidence 33 33456689999999999864 458899999999999999999999997422111 1111111111111111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPT-MKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~l~ 707 (708)
.. ....+.+++.+||+.||++||+ ++++.+|-+
T Consensus 241 ~~----~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~ 274 (384)
T 4fr4_A 241 SA----WSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPY 274 (384)
T ss_dssp TT----SCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGG
T ss_pred Cc----CCHHHHHHHHHHhcCCHhHhcccHHHHHcChh
Confidence 11 1235789999999999999998 888877643
No 79
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.7e-41 Score=347.99 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=202.2
Q ss_pred hccccccceeccccCccEEEEEe-----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA- 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~- 508 (708)
.++|++.+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 84 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 37899999999999999999973 36889999998753 334567899999999999999999999998654
Q ss_pred -CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 509 -RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 509 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
...++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 85 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp HTSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CCceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCc
Confidence 56899999999999999997654 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccc----cccc----cc
Q 039322 588 IAKFLKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS----SSLN----TD 656 (708)
Q Consensus 588 ~a~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~----~~~~----~~ 656 (708)
++......... .....++..|+|||.+.+..++.++||||||+++|||+||..||........ .... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 99876543322 2334567789999999999999999999999999999999999864321100 0000 00
Q ss_pred cccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 IALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
............+.+.. .+..+.+++.+||+.||++|||++|+++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 240 HLIELLKNNGRLPRPDG---CPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHHHHTTCCCCCCTT---CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHhccCcCCCCcC---cCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11111111111111111 2235888999999999999999999999875
No 80
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4e-41 Score=349.57 Aligned_cols=259 Identities=20% Similarity=0.270 Sum_probs=210.6
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcch--hHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQ--IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
.++|++.+.||+|+||.||+|... +|+.||+|.+........ ....+.+.+|++++++++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 478999999999999999999764 689999999876432211 12367799999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC----cEEEeecc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY----EAHVADFG 587 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 587 (708)
++||||+++++|.+++... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 9999999999999999754 3478999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
++....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+.....
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANITSVSY 235 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTCC
T ss_pred cceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhccc
Confidence 998765432 23455789999999999988999999999999999999999999864221 112222222222
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
..+.......+..+.+++.+||+.||++|||++|+++|-++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~ 276 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTT
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence 22211112223468899999999999999999999998653
No 81
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=342.62 Aligned_cols=255 Identities=25% Similarity=0.400 Sum_probs=185.9
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... .......+.+.+|++++++++||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA-MYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-HHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhh-hhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 47899999999999999999975 578999999986411 0011224678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++....
T Consensus 89 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999999997543 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........+++.|+|||.+.+..++.++||||+|+++|||++|+.||...... .............+..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~- 234 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--------NTLNKVVLADYEMPSF- 234 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSSCCCCCTT-
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--------HHHHHHhhcccCCccc-
Confidence 4444444567899999999999888999999999999999999999998743211 1111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.||++|||++|+++|-+
T Consensus 235 ---~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 265 (278)
T 3cok_A 235 ---LSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265 (278)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHTTSTT
T ss_pred ---cCHHHHHHHHHHcccCHhhCCCHHHHhcCcc
Confidence 1235789999999999999999999998754
No 82
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.7e-42 Score=369.05 Aligned_cols=258 Identities=21% Similarity=0.285 Sum_probs=207.0
Q ss_pred HHHHHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 430 EIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 430 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
++....++|++.+.||+|+||.||+|..+ +++.||+|++++.. .......+.+.+|+++++.++||||+++++++.++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~-~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE-MIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-HHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhh-hhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 44455689999999999999999999765 58899999986410 00011233578899999999999999999999999
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
+..|+||||+++|+|.+++... .+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 9999999999999999999643 389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-ccccccccccccCccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 039322 589 AKFLKPESS-NWTEFAGTYGYVAPELAYTMK----ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEIL 663 (708)
Q Consensus 589 a~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 663 (708)
|........ ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ......++
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~ 286 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------VGTYSKIM 286 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHH
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh--------hhHHHHHH
Confidence 987654332 223567999999999987655 77899999999999999999999974321 11112222
Q ss_pred CC----CCCCCCchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhh
Q 039322 664 DP----RLPPPSRSVQEKLISIMEVAFSCLNESPES--RPTMKVVTQQVR 707 (708)
Q Consensus 664 ~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~ 707 (708)
.. .++... .....+.++|.+|++.+|++ ||+++|+++|-+
T Consensus 287 ~~~~~~~~p~~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 287 NHKNSLTFPDDN----DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp THHHHCCCCTTC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred hccccccCCCcc----cccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 11 111111 11235788999999999999 999999999865
No 83
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.5e-42 Score=357.31 Aligned_cols=255 Identities=21% Similarity=0.278 Sum_probs=205.5
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCee
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~ 511 (708)
..++|++.+.||+|+||.||+|..+ +|+.||||++.+... ...+|++++.++ +||||+++++++.+++..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~ 91 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGKYV 91 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence 3578999999999999999999664 688999999976321 234578888888 799999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC----CcEEEeecc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE----YEAHVADFG 587 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg 587 (708)
|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||++..+ +.+||+|||
T Consensus 92 ~lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 99999999999999996543 489999999999999999999999 99999999999998543 359999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
++..............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .........+.....
T Consensus 166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~~~~i~~~~~ 240 (342)
T 2qr7_A 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-----DTPEEILARIGSGKF 240 (342)
T ss_dssp TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-----SCHHHHHHHHHHCCC
T ss_pred CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-----CCHHHHHHHHccCCc
Confidence 998776555555567889999999999887889999999999999999999999974211 111122222222232
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+......+.+++.+||+.||++|||++|+++|-+
T Consensus 241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 2222222223446889999999999999999999998754
No 84
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.3e-41 Score=347.17 Aligned_cols=256 Identities=21% Similarity=0.381 Sum_probs=207.9
Q ss_pred hccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
.++|.+.+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|++++++++||||+++++++.++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 47899999999999999999965 245789999997532 234567899999999999999999999999999
Q ss_pred CeeEEEEEeccCCCHHHHhccccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTA---------------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQD 567 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~d 567 (708)
+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ |++|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccc
Confidence 999999999999999999976432 13478999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCc
Q 039322 568 ISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDF 644 (708)
Q Consensus 568 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~ 644 (708)
|||+||+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999876543322 233456788999999998889999999999999999999 9999874
Q ss_pred cccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 645 LSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
... ......+.......... ..+..+.+++.+||+.||++|||++|++++|+
T Consensus 256 ~~~--------~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 256 IPP--------ERLFNLLKTGHRMERPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp CCG--------GGHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCH--------HHHHHHhhcCCcCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 322 11111111111111111 12335889999999999999999999999875
No 85
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=5.3e-41 Score=363.86 Aligned_cols=252 Identities=23% Similarity=0.351 Sum_probs=207.5
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.+.+.||+|+||.||+|... +|+.||||++.... .........+.+|+++++.++||||+++++++..++..++|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~-~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK-IRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHH-HHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhh-ccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 68999999999999999999764 79999999986421 01112356789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++|+|.+++... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999999754 3489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
. .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+.... ......+.+.....+...
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~p~~~ 239 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--------PTLFKKICDGIFYTPQYL 239 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--------HHHHHHHHTTCCCCCTTC
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCCcCCCccC
Confidence 3 33345679999999999988765 6799999999999999999999974321 122223333332222111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+.+++.+||+.||++|||++|+++|-+
T Consensus 240 ----s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~ 269 (476)
T 2y94_A 240 ----NPSVISLLKHMLQVDPMKRATIKDIREHEW 269 (476)
T ss_dssp ----CHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred ----CHHHHHHHHHHcCCCchhCcCHHHHHhCHH
Confidence 234788999999999999999999998743
No 86
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5e-41 Score=342.60 Aligned_cols=256 Identities=22% Similarity=0.325 Sum_probs=207.2
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+.+|++++++++||||+++++++..++..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc--CCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 47899999999999999999965 468999999986532 123445778899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc---EEEeeccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGIAK 590 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~a~ 590 (708)
||||+++|+|.+++... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++. +||+|||++.
T Consensus 83 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 99999999999988654 3489999999999999999999999 9999999999999987655 9999999998
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
..... .......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ......+.......+
T Consensus 157 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~ 227 (284)
T 3kk8_A 157 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGAYDYP 227 (284)
T ss_dssp ECCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCC
T ss_pred EcccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--------hHHHHHHHhccccCC
Confidence 66533 233456789999999999999999999999999999999999999864321 111111111111111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..........+.+++.+||+.||++|||++|+++|-+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (284)
T 3kk8_A 228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264 (284)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCcc
Confidence 1111122345889999999999999999999998754
No 87
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-41 Score=356.93 Aligned_cols=266 Identities=24% Similarity=0.277 Sum_probs=206.2
Q ss_pred HHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCC-cchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 431 IVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLP-CDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 431 ~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
+....++|++.+.||+|+||.||+|.. .+++.||+|++..... .......+.+.+|++++++++||||+++++++.++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345668999999999999999999965 5688999999864210 01123457899999999999999999999999999
Q ss_pred CeeEEEEEeccCCCHHHHhccccc-------------------------------------ccCCCHHHHHHHHHHHHHH
Q 039322 509 RHSFLVYELLERGSLAAILSSDTA-------------------------------------AQELGWSQRMNVIKGVADA 551 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~i~~~ 551 (708)
+..++||||+++|+|.+++..... ...+++..++.++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999852110 1123577888999999999
Q ss_pred HHHHHhCCCCCeEEccCCCCCeeeCCCC--cEEEeecccccccCCCCC----ccccccccccccCcccccc--CCCCcch
Q 039322 552 LSYLHHDCFPPIVHQDISSKNLLLDLEY--EAHVADFGIAKFLKPESS----NWTEFAGTYGYVAPELAYT--MKITEKC 623 (708)
Q Consensus 552 l~~Lh~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfg~a~~~~~~~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~ 623 (708)
|+|||++ +|+||||||+||+++.++ .+||+|||++..+..... ......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999986543221 2345678999999999865 6688999
Q ss_pred hHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 039322 624 DVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVT 703 (708)
Q Consensus 624 DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 703 (708)
||||||+++|||++|+.||..... ......+..................+.+++.+||+.||++|||+.|++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVND--------ADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCh--------HHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 999999999999999999974322 122222222332222222222345688999999999999999999999
Q ss_pred HHhh
Q 039322 704 QQVR 707 (708)
Q Consensus 704 ~~l~ 707 (708)
+|-+
T Consensus 330 ~hp~ 333 (345)
T 3hko_A 330 QHPW 333 (345)
T ss_dssp HSHH
T ss_pred cChh
Confidence 9754
No 88
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.1e-41 Score=341.87 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=207.6
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF----VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 478999999999999999999654 57789999987532 2346778999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee---CCCCcEEEeeccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL---DLEYEAHVADFGIAK 590 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~ 590 (708)
||||+++++|.+++... ..+++..++.++.|++.||+|||++ |++||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 99999999999998654 3489999999999999999999999 99999999999999 788999999999998
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
...... ......+++.|+|||.+.+. ++.++||||+|+++|+|++|+.||..... ......+.......+
T Consensus 158 ~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~ 227 (277)
T 3f3z_A 158 RFKPGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD--------SEVMLKIREGTFTFP 227 (277)
T ss_dssp ECCTTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCC
T ss_pred eccCcc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 765433 33456789999999987654 89999999999999999999999874321 122222222233222
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~ 264 (277)
T 3f3z_A 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 264 (277)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence 2222233456889999999999999999999998754
No 89
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.5e-41 Score=351.55 Aligned_cols=262 Identities=23% Similarity=0.372 Sum_probs=211.0
Q ss_pred HHHHHHhccccccceeccccCccEEEEEeC------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEE
Q 039322 429 DEIVRATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFY 502 (708)
Q Consensus 429 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~ 502 (708)
+++....++|++.+.||+|+||.||+|... +++.||+|.+.... .......+.+|++++++++||||++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344455689999999999999999999654 36789999997532 234566799999999999999999999
Q ss_pred EEEeeCCeeEEEEEeccCCCHHHHhccccc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee
Q 039322 503 GFCSHARHSFLVYELLERGSLAAILSSDTA-------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL 575 (708)
Q Consensus 503 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill 575 (708)
+++.+++..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ ||+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEE
Confidence 999999999999999999999999975432 13468999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccc
Q 039322 576 DLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSS 652 (708)
Q Consensus 576 ~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~ 652 (708)
+.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.....
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----- 246 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----- 246 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-----
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-----
Confidence 99999999999999865433221 223456889999999998889999999999999999999 8999874321
Q ss_pred cccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+........... .+..+.+++.+||+.||++|||+.|++++|+
T Consensus 247 ---~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 247 ---EQVLRFVMEGGLLDKPDN---CPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp ---HHHHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred ---HHHHHHHHcCCcCCCCCC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111222222222211111 2235788999999999999999999999985
No 90
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=8.9e-41 Score=356.62 Aligned_cols=267 Identities=16% Similarity=0.226 Sum_probs=205.2
Q ss_pred hccccccceeccc--cCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 435 TNDFDAQYCIGNG--GHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G--~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
.++|++.+.||+| +||.||+|... +|+.||||++.... ......+.+.+|++++++++||||+++++++.+++..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA--CSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 4789999999999 99999999765 79999999997532 1234567788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 999999999999999976532 3489999999999999999999999 999999999999999999999999998865
Q ss_pred cCCCC-------CccccccccccccCcccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 039322 592 LKPES-------SNWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 592 ~~~~~-------~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....................
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence 42211 11233478899999999887 5789999999999999999999999974322110000000000000
Q ss_pred cCCCC----------------------------------CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 663 LDPRL----------------------------------PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 663 ~~~~~----------------------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+... .+...........+.+++.+||+.||++|||++|+++|-+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~ 336 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 336 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHH
Confidence 00000 0000011122346889999999999999999999998744
No 91
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=9.4e-41 Score=339.93 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=193.7
Q ss_pred hccccccceeccccCccEEEEEeCC----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.++|++.+.||+|+||.||+|.... +..||+|.+.... .....+.+.+|+.++++++||||+++++++. ++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence 4789999999999999999997642 4579999987532 2345678999999999999999999999984 467
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 899999999999999997543 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCC
Q 039322 591 FLKPESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 591 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
........ .....+++.|+|||.+.+..++.++||||||+++|||++ |..||..... ......+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--------~~~~~~i~~~~~~ 236 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--------NDVIGRIENGERL 236 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GGHHHHHHTTCCC
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--------HHHHHHHHcCCCC
Confidence 76543222 233456789999999998899999999999999999997 9999874321 1111222222111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+. ..+..+.+++.+||+.||++|||+.|++++|+
T Consensus 237 ~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 237 PMPP---NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111 12335788999999999999999999999875
No 92
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.7e-41 Score=354.99 Aligned_cols=253 Identities=23% Similarity=0.280 Sum_probs=197.4
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHH-HHhccCCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKA-LTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
.++|++.+.||+|+||.||+|+.+ +++.||+|++++.... .......+..|..+ ++.++||||+++++++.+.+..|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 378999999999999999999764 5889999999763211 12234556677776 57789999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 116 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999999997543 488999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+..
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~~ 261 (373)
T 2r5t_A 190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--------AEMYDNILNKPLQLKPN 261 (373)
T ss_dssp BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--------HHHHHHHHHSCCCCCSS
T ss_pred ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhcccCCCCC
Confidence 4444445567899999999999999999999999999999999999999974321 12222222222222211
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHH----HHHHHh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMK----VVTQQV 706 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~----evl~~l 706 (708)
....+.+++.+||++||++||++. |+.+|-
T Consensus 262 ----~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~ 295 (373)
T 2r5t_A 262 ----ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHV 295 (373)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSG
T ss_pred ----CCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCc
Confidence 123578899999999999999974 565553
No 93
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-41 Score=352.43 Aligned_cols=257 Identities=22% Similarity=0.362 Sum_probs=205.1
Q ss_pred HhccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEe
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCS 506 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~ 506 (708)
..++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+++++++ +||||+++++++.
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 457899999999999999999975 245689999997532 223456799999999999 8999999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccccc--------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEc
Q 039322 507 HARHSFLVYELLERGSLAAILSSDTAA--------------------QELGWSQRMNVIKGVADALSYLHHDCFPPIVHQ 566 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~ 566 (708)
.++..++||||+++|+|.+++...... ..+++..++.++.|++.||+|||++ ||+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 999999999999999999999765421 3479999999999999999999999 99999
Q ss_pred cCCCCCeeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 039322 567 DISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRD 643 (708)
Q Consensus 567 dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~ 643 (708)
||||+||+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|||+| |..||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999866543322 234557889999999998899999999999999999998 999987
Q ss_pred ccccccccccccccccccccCCCC-CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 644 FLSLISSSSLNTDIALDEILDPRL-PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..... ........... ...+.. .+..+.+++.+||+.||++|||++|++++|+
T Consensus 277 ~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 277 GIPVD--------ANFYKLIQNGFKMDQPFY---ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp TCCCS--------HHHHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCcH--------HHHHHHHhcCCCCCCCCC---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 43211 11111111111 111111 1335888999999999999999999999985
No 94
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.7e-41 Score=350.00 Aligned_cols=266 Identities=21% Similarity=0.310 Sum_probs=192.1
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +|+.||+|+++.... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE---EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST---TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc---cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence 468999999999999999999764 689999999875321 1234568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccc---cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 514 VYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
||||++ |+|.+++.... ....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 156 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccce
Confidence 999998 59999986532 123489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc----------ccccc
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN----------TDIAL 659 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~----------~~~~~ 659 (708)
.............+|+.|+|||++.+. .++.++||||+||++|||++|+.||............ .....
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp ETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred ecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence 776544444556789999999998764 5899999999999999999999999743221000000 00000
Q ss_pred cc--ccCCCCCCC-Cchh---------HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 660 DE--ILDPRLPPP-SRSV---------QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 660 ~~--~~~~~~~~~-~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ...+..... .... ......+.+++.+||+.||++|||++|+++|-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~ 296 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChh
Confidence 00 000000000 0000 011236889999999999999999999998754
No 95
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=343.79 Aligned_cols=250 Identities=22% Similarity=0.265 Sum_probs=198.0
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~l 513 (708)
++|++.+.||+|+||+||+|... +|+.||||++..... .......+..|+..+.++ +||||+++++++.+++..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 68999999999999999999765 799999999875432 223445566666666655 89999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 135 v~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 669999886543 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
... ......||+.|+|||++.+ .++.++||||||+++|||++|..|+..... ...+.....++ ..
T Consensus 209 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-----------~~~~~~~~~~~--~~ 273 (311)
T 3p1a_A 209 TAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-----------WQQLRQGYLPP--EF 273 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-----------HHHHTTTCCCH--HH
T ss_pred cCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-----------HHHHhccCCCc--cc
Confidence 332 2344568999999998876 789999999999999999999776543211 11111111111 11
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.......+.+++.+||+.||++|||++|++++-++
T Consensus 274 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~ 308 (311)
T 3p1a_A 274 TAGLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308 (311)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccc
Confidence 11223568899999999999999999999998653
No 96
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.4e-41 Score=353.42 Aligned_cols=259 Identities=22% Similarity=0.352 Sum_probs=206.4
Q ss_pred HHhccccccceeccccCccEEEEEeCC------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELPS------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC 505 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~ 505 (708)
...++|++.+.||+|+||.||+|.... ++.||+|.+.... .....+.+.+|+++++++ +||||+++++++
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 345789999999999999999997532 2479999997632 234567899999999999 899999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhccccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCee
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDTA-----------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLL 574 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nil 574 (708)
.+++..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ ||+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 999999999999999999999975431 23579999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccc
Q 039322 575 LDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSS 651 (708)
Q Consensus 575 l~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~ 651 (708)
++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|||+| |..||........
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~- 275 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK- 275 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-
Confidence 999999999999999866443322 233456789999999998899999999999999999998 9999874221100
Q ss_pred ccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 652 SLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
............. + .. .+..+.+++.+||+.||++|||++|++++|+
T Consensus 276 ---~~~~~~~~~~~~~--~-~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 276 ---FYKLVKDGYQMAQ--P-AF---APKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp ---HHHHHHHTCCCCC--C-TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---HHHHHhcCCCCCC--C-CC---CCHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 0000111111111 1 11 1235788999999999999999999999885
No 97
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.2e-41 Score=366.69 Aligned_cols=252 Identities=22% Similarity=0.421 Sum_probs=206.0
Q ss_pred HhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
..++|++.+.||+|+||.||+|..++++.||||+++... ...+.|.+|++++++++||||+++++++. .+..++
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 457899999999999999999998888999999997632 24678999999999999999999999986 567899
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 260 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp EECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 999999999999997543 23578999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCC
Q 039322 594 PESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RLPPP 670 (708)
Q Consensus 594 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 670 (708)
..... .....++..|+|||++....++.++||||||+++|||+| |+.||...... .....+... +.+.+
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~~~~ 407 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIRALERGYRMPRP 407 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHHHHHTCCCCCC
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCC
Confidence 32111 122345788999999998899999999999999999999 99999743221 111111111 11111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .+..+.+++.+||+.||++|||+++|++.|+
T Consensus 408 -~~---~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~ 440 (454)
T 1qcf_A 408 -EN---CPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440 (454)
T ss_dssp -TT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -CC---CCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 11 2335888999999999999999999999875
No 98
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.1e-41 Score=367.78 Aligned_cols=254 Identities=22% Similarity=0.271 Sum_probs=198.4
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... ........+.+|+++++.++||||+++++++...+..++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-C-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhh-hhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 47899999999999999999965 5689999999864210 112234567889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+ + ||+||||||+|||++.++.+||+|||+|+..
T Consensus 226 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999999996543 48999999999999999999998 7 9999999999999999999999999999865
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+..
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~~ 371 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEIRFPRT 371 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHHhCCCCCCcc
Confidence 5444455567899999999999999999999999999999999999999964321 11112222222221111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
....+.+++.+||++||++|| +++|+++|-+
T Consensus 372 ----~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~ 407 (446)
T 4ejn_A 372 ----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407 (446)
T ss_dssp ----SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred ----CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcc
Confidence 123578899999999999999 9999998754
No 99
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.5e-41 Score=340.02 Aligned_cols=251 Identities=22% Similarity=0.305 Sum_probs=182.8
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|.. .+|+.||+|++..... ......+.+.+|++++++++||||+++++++.+++..++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhc-chHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 6899999999999999999965 4789999999976322 2223456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+ ++++.+++.... .+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 92 ~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 668888886543 489999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.. ......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||+..... .....+.......+..
T Consensus 165 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~- 234 (275)
T 2eue_A 165 GN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFKNISNGVYTLPKF- 234 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCCTT-
T ss_pred cc-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCcc-
Confidence 32 2344578999999999887765 68999999999999999999999743211 1111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.||++|||++|+++|-+
T Consensus 235 ---~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~ 265 (275)
T 2eue_A 235 ---LSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHTTCHH
T ss_pred ---CCHHHHHHHHHHhhcCHhHCCCHHHHhhCCe
Confidence 1234788999999999999999999998754
No 100
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.4e-40 Score=361.11 Aligned_cols=249 Identities=25% Similarity=0.399 Sum_probs=202.6
Q ss_pred HhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC-eeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR-HSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~-~~~ 512 (708)
..++|++.+.||+|+||.||+|... |+.||||+++... ..+.|.+|++++++++||||+++++++...+ ..+
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 263 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 263 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceE
Confidence 3478999999999999999999885 7899999998632 3567999999999999999999999987765 789
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++..
T Consensus 264 iv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence 99999999999999976432 3378999999999999999999999 9999999999999999999999999999854
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... .....+......+.+
T Consensus 340 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~~~p 408 (450)
T 1k9a_A 340 SST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------DVVPRVEKGYKMDAP 408 (450)
T ss_dssp C---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--------THHHHHHTTCCCCCC
T ss_pred ccc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCC
Confidence 322 223356889999999999999999999999999999998 99998743221 111112121111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .+..+.+++.+||+.||++|||++++++.|+
T Consensus 409 ~~---~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 409 DG---CPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11 2345888999999999999999999998874
No 101
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1e-41 Score=352.35 Aligned_cols=256 Identities=22% Similarity=0.344 Sum_probs=197.7
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe---
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH--- 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~--- 510 (708)
.++|++.+.||+|+||.||+|.. .+++.||||+++.... ........+.+|++++++++||||+++++++...+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 37899999999999999999975 5789999999986432 233446688999999999999999999999876543
Q ss_pred -eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 511 -SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 511 -~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred ccEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 499999999999999997543 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 039322 590 KFLKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 590 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
......... .....|++.|+|||++.+..++.++||||||+++|||++|+.||...... ..........
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~~ 235 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--------SVAYQHVRED 235 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhcCC
Confidence 866543222 23456899999999999989999999999999999999999999743211 1111111111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
..++.......+..+.+++.+||+.||++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 111111111223468899999999999999988887765
No 102
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=343.31 Aligned_cols=251 Identities=27% Similarity=0.455 Sum_probs=196.4
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
++|++.+.||+|+||.||+|... ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence 68999999999999999999874 788999998642 345779999999999999999999998874 478999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc-EEEeecccccccCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE-AHVADFGIAKFLKP 594 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfg~a~~~~~ 594 (708)
||+++|+|.+++........+++..++.++.|+++||+|||+.+..||+||||||+||+++.++. +||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999987665556889999999999999999999932229999999999999998886 79999999975542
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
. .....|++.|+|||++.+..++.++||||||+++|||++|+.||+...... ............++...
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~-- 227 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA------FRIMWAVHNGTRPPLIK-- 227 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH------HHHHHHHHTTCCCCCBT--
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH------HHHHHHHhcCCCCCccc--
Confidence 2 234468999999999999899999999999999999999999997432110 00011111111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 228 -~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 228 -NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 12235788999999999999999999999874
No 103
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.6e-41 Score=346.04 Aligned_cols=264 Identities=22% Similarity=0.316 Sum_probs=200.7
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+.+|++++++++||||+++++++..++..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC--C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc--cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 68999999999999999999764 58999999987642 2334467788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 99999999999886543 489999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccc-------------cccc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD-------------IALD 660 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~-------------~~~~ 660 (708)
.........+++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||.............. ....
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 5445556678999999998876 5679999999999999999999999975332110000000 0000
Q ss_pred cccCCCCCCCCc------hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPSR------SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.+.. ........+.+++.+||+.||++|||++|+++|-+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 287 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGG
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChH
Confidence 000001111000 00122345789999999999999999999998754
No 104
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.9e-40 Score=350.17 Aligned_cols=266 Identities=23% Similarity=0.361 Sum_probs=212.7
Q ss_pred hHHHHHHHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcch----hHhHHHHHHHHHHHHhc-cCCceee
Q 039322 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQ----IADQKEFLIEVKALTEI-RHRNIVK 500 (708)
Q Consensus 427 ~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l-~h~~iv~ 500 (708)
.+.......++|++.+.||+|+||.||+|... +|+.||||+++....... ....+.+.+|+.+++++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 44445556688999999999999999999774 799999999876432211 12246788999999999 7999999
Q ss_pred EEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc
Q 039322 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE 580 (708)
Q Consensus 501 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 580 (708)
+++++...+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 999999999999999999999999999643 3489999999999999999999999 9999999999999999999
Q ss_pred EEEeecccccccCCCCCccccccccccccCcccccc------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc
Q 039322 581 AHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT------MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN 654 (708)
Q Consensus 581 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~ 654 (708)
+||+|||++....... ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||.....
T Consensus 239 ikl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------- 310 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------- 310 (365)
T ss_dssp EEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------
T ss_pred EEEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-------
Confidence 9999999998765432 3345679999999998863 3578899999999999999999999864221
Q ss_pred cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+...........+......+.+++.+||+.||++|||++|+++|-+
T Consensus 311 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 362 (365)
T 2y7j_A 311 -ILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPF 362 (365)
T ss_dssp -HHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred -HHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 1111222222222211111122345889999999999999999999999865
No 105
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.7e-41 Score=341.18 Aligned_cols=253 Identities=27% Similarity=0.417 Sum_probs=202.6
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
+.++|++.+.||+|+||.||+|.. .+++.||+|++.... .........+.+|++++++++||||+++++++.+++..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY 85 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-HHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccc-cchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence 347899999999999999999965 467799999986411 011122567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++...
T Consensus 86 lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999999654 3489999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.. .......+++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... .....+.......+..
T Consensus 160 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 229 (279)
T 3fdn_A 160 PS--SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKRISRVEFTFPDF 229 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCCCCTT
T ss_pred Cc--ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--------HHHHHHHhCCCCCCCc
Confidence 32 2234557899999999999988999999999999999999999999743211 1111111111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.||++|||++|+++|-+
T Consensus 230 ----~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 230 ----VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp ----SCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred ----CCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 1235788999999999999999999999865
No 106
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.4e-40 Score=341.14 Aligned_cols=254 Identities=22% Similarity=0.339 Sum_probs=209.8
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+.+|++++++++||||+++++++.+++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 378999999999999999999765 588999999865322 123456788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.+++... ..+++.+++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 93 VLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EEECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999988653 3489999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........+++.|+|||.+.+..++.++||||+|+++|+|++|+.||+..... .....+.......+..
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~- 237 (294)
T 2rku_A 167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKKNEYSIPKH- 237 (294)
T ss_dssp STTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTTCCCCCTT-
T ss_pred cCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhhccCCCccc-
Confidence 5444455567899999999999888999999999999999999999999743211 1111111222211111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.||++|||++|++++-+
T Consensus 238 ---~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~ 268 (294)
T 2rku_A 238 ---INPVAASLIQKMLQTDPTARPTINELLNDEF 268 (294)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred ---cCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 1235788999999999999999999998743
No 107
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.4e-39 Score=373.89 Aligned_cols=350 Identities=22% Similarity=0.236 Sum_probs=264.5
Q ss_pred CcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccC-----CCC----ccccCCC
Q 039322 4 LSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTS-----YLP----HNVCRGG 73 (708)
Q Consensus 4 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~-----~~~----~~~~~l~ 73 (708)
|++|+|++|+++.+.+..|.++++|++|+|++|.+.+..+..+.. ++|+.|++++|.... .+| ..+..++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~ 329 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCT
T ss_pred CCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCC
Confidence 555555555555555555555555555555555555555544443 455555555443221 111 2455566
Q ss_pred CccEEeccCCccccccCccCcCCCCCcEEEccCCccc--cccccccCCC--CCCCEEEcccCcceeeCCCCCCCCCCCCE
Q 039322 74 ALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLT--GNISEALGIY--PNLTFIDLSRNDFYGEISSNWGKCPKLGT 149 (708)
Q Consensus 74 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~--~~~~~~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 149 (708)
+|++|++++|.+++..+..|.++++|++|++++|.++ .+....|..+ ++|++|++++|+++++.+..|..+++|+.
T Consensus 330 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 409 (680)
T 1ziw_A 330 CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEV 409 (680)
T ss_dssp TCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCE
Confidence 6666666666666666666666667777777666532 3333334332 46777777778888888888888889999
Q ss_pred EEcccCcccccCC-ccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCcccc--ccCCcccCCCCCCCeEeccC
Q 039322 150 LNVSMNNITGGIP-REIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFT--GRLPPEIGSLVDLEYLDLSA 226 (708)
Q Consensus 150 L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~~~~L~~L~l~~ 226 (708)
|+|++|.+++..+ ..|..+++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|++|+|++
T Consensus 410 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~ 489 (680)
T 1ziw_A 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 489 (680)
T ss_dssp EECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCS
T ss_pred EeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCC
Confidence 9999998875444 67888889999999999888777888888899999999998886 46788899999999999999
Q ss_pred CcccccCCCCCCccccceeecccCcccccCCC--------hhhhhhcccchhhcccccCCCCCchhhcCcccCCceeccc
Q 039322 227 NRFNNSVPENLGNLLKLHYLGLSNNQFVLELP--------KELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSH 298 (708)
Q Consensus 227 N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--------~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~ 298 (708)
|++++..+..|.++++|+.|++++|++++..+ ..|.++++|+.|+|++|+++...+..|..+++|+.|++++
T Consensus 490 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 569 (680)
T 1ziw_A 490 NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGL 569 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCC
Confidence 99998888889999999999999999986422 2478899999999999999966666789999999999999
Q ss_pred ccccCCCCCcccccccccEEecCCCcCCCCCCCcc--ccccCcccccccccCcCCCC
Q 039322 299 NNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNST--AFRNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 299 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~~ 353 (708)
|++++..+..|..+++|+.|++++|.+++..+... .++.++.+.+.+|||.|+|.
T Consensus 570 N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 570 NNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99998888889999999999999999999877633 57889999999999999996
No 108
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.2e-41 Score=352.97 Aligned_cols=255 Identities=16% Similarity=0.217 Sum_probs=204.0
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~ 512 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++..++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 36899999999999999999975 5789999999875321 23578899999999 8999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc-----EEEeecc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE-----AHVADFG 587 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg 587 (708)
+||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++. +||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEEEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 999999 899999997542 4589999999999999999999999 9999999999999999887 9999999
Q ss_pred cccccCCCCCc-------cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 039322 588 IAKFLKPESSN-------WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 588 ~a~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
++..+...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~-----~~~~~~ 230 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT-----LKERYQ 230 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS-----HHHHHH
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc-----HHHHHH
Confidence 99876543321 245679999999999999999999999999999999999999997432110 001111
Q ss_pred cccCCCCCCCCch-hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPSRS-VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.......+... ....+ .+.+++.+||+.||.+||+++++.+.|+
T Consensus 231 ~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 231 KIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 1111111111000 00112 6889999999999999999999998774
No 109
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.3e-41 Score=347.58 Aligned_cols=257 Identities=23% Similarity=0.385 Sum_probs=207.9
Q ss_pred hccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSH 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~ 507 (708)
.++|++.+.||+|+||.||+|.. .+++.||||.++... .....+.+.+|+++++++ +||||+++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 47899999999999999999974 356789999997642 234567899999999999 89999999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhccccc---------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTA---------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 572 (708)
++..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ |++||||||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N 175 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 175 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccce
Confidence 9999999999999999999976542 12489999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccc
Q 039322 573 LLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLIS 649 (708)
Q Consensus 573 ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~ 649 (708)
|+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.......
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 255 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh
Confidence 99999999999999999876544332 233456789999999999899999999999999999999 999987432110
Q ss_pred ccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ............. + . ..+..+.+++.+||+.||++|||++|++++|+
T Consensus 256 ~----~~~~~~~~~~~~~--~-~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 303 (313)
T 1t46_A 256 K----FYKMIKEGFRMLS--P-E---HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (313)
T ss_dssp H----HHHHHHHTCCCCC--C-T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H----HHHHhccCCCCCC--c-c---cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 0 0001111111111 1 1 12235889999999999999999999999885
No 110
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.9e-41 Score=347.65 Aligned_cols=252 Identities=23% Similarity=0.379 Sum_probs=196.9
Q ss_pred ccccccceeccccCccEEEEEeC-CCc----EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQ----VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
++|++.+.||+|+||.||+|.+. +++ .||+|.++... .....+.+.+|++++++++||||+++++++..++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 68999999999999999999753 444 36888876422 2234678999999999999999999999998765
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++|+||+.+|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 778999999999999997643 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 039322 591 FLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 591 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
........ .....+|..|+|||++.+..++.++||||||+++|||+| |+.||+..... .....+.....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~~~~~ 237 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--------EISSILEKGER 237 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHHHHTTCC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--------HHHHHHHcCCC
Confidence 76544332 233456789999999999999999999999999999999 99999743221 11111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.... ....+.+++.+||+.||++|||++|++++|+
T Consensus 238 ~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 238 LPQPPI---CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCCCTT---BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CCCCcc---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111111 2235888999999999999999999999874
No 111
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=363.26 Aligned_cols=348 Identities=17% Similarity=0.172 Sum_probs=305.1
Q ss_pred cEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEeccCC
Q 039322 5 SILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSEN 83 (708)
Q Consensus 5 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n 83 (708)
+.++.++++++.+ |..+ .++|++|+|++|+|++..+..|.. ++|+.|++++|.+.+..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~i-p~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFVAV-PEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCSSC-CSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCcC-CCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 5788999999854 4444 368999999999999888888866 88999999999999988999999999999999999
Q ss_pred ccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCc
Q 039322 84 HFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPR 163 (708)
Q Consensus 84 ~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 163 (708)
.+++..+..|.++++|++|+|++|.++++.+..|..+++|++|++++|.+..+.+..|..+++|+.|+|++|.++...+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99977777889999999999999999999899999999999999999999999999999999999999999999977777
Q ss_pred cccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccc
Q 039322 164 EIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKL 243 (708)
Q Consensus 164 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L 243 (708)
.|..+++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+..+.......+|++|+|++|+++...+..+..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 89999999999999999998878889999999999999988777777766667799999999999996555678889999
Q ss_pred eeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCC
Q 039322 244 HYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDN 323 (708)
Q Consensus 244 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 323 (708)
+.|+|++|++++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|+|++|++++..+..|..+++|+.|++++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 99999999999888888999999999999999999888889999999999999999999888888899999999999999
Q ss_pred cCCCCCCCccccccCcccccccccCcCCCCCC
Q 039322 324 QLQGPVPNSTAFRNAPVEALKGNKGLCGGVKG 355 (708)
Q Consensus 324 ~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 355 (708)
++.|.++..+.+.......+.++.+.|++|..
T Consensus 331 ~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 331 PLACDCRLLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp CEECSGGGHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred CccCccchHhHHhhhhccccCccCceeCCchH
Confidence 99988766554444555667778888877643
No 112
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4e-41 Score=342.42 Aligned_cols=258 Identities=25% Similarity=0.382 Sum_probs=206.7
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee--CCee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH--ARHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~--~~~~ 511 (708)
.++|++.+.||+|+||.||+|... +++.||+|.+..... .....+.+.+|++++++++||||+++++++.. ++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 478999999999999999999664 789999999975322 23456789999999999999999999998854 5688
Q ss_pred EEEEEeccCCCHHHHhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEccCCCCCeeeCCCCcEEEee
Q 039322 512 FLVYELLERGSLAAILSSDTA-AQELGWSQRMNVIKGVADALSYLHHDCFPP-----IVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-----ivH~dlk~~Nill~~~~~~kl~D 585 (708)
++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. + ++||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 999999999999999975432 33489999999999999999999998 7 99999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 665 (708)
||++..............+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~~~ 231 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--------KELAGKIREG 231 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHT
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--------HHHHHHHhhc
Confidence 99998765443333456789999999999988899999999999999999999999874321 1111111111
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.....+.. .+..+.+++.+||+.||++|||++|+++++++
T Consensus 232 ~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 232 KFRRIPYR---YSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp CCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ccccCCcc---cCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 11111111 22358899999999999999999999998764
No 113
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=6.3e-41 Score=353.05 Aligned_cols=255 Identities=21% Similarity=0.265 Sum_probs=195.3
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||||++.... ...+.+.+|+.++++++||||+++++++..++..++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-----AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-----TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-----cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 378999999999999999999765 78999999997532 223567899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc--EEEeecccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE--AHVADFGIAKF 591 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~a~~ 591 (708)
||||+++|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+++.
T Consensus 94 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 94 IMEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 999999999999996533 489999999999999999999999 9999999999999987765 99999999974
Q ss_pred cCCCCCccccccccccccCccccccCCCCcc-hhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTMKITEK-CDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
.... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||....... ........+.......+
T Consensus 168 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~ 242 (361)
T 3uc3_A 168 SVLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR----DYRKTIQRILSVKYSIP 242 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC----CHHHHHHHHHTTCCCCC
T ss_pred cccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH----HHHHHHHHHhcCCCCCC
Confidence 4322 22344579999999999988877665 899999999999999999997432210 11111222222222111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ......+.+++.+||+.||++|||++|+++|-+
T Consensus 243 ~~--~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~ 277 (361)
T 3uc3_A 243 DD--IRISPECCHLISRIFVADPATRISIPEIKTHSW 277 (361)
T ss_dssp TT--SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred Cc--CCCCHHHHHHHHHHccCChhHCcCHHHHHhCcc
Confidence 11 011235788999999999999999999998754
No 114
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9.5e-41 Score=356.34 Aligned_cols=254 Identities=22% Similarity=0.261 Sum_probs=193.1
Q ss_pred cccccc-ceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHh-ccCCceeeEEEEEee----C
Q 039322 436 NDFDAQ-YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE-IRHRNIVKFYGFCSH----A 508 (708)
Q Consensus 436 ~~~~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~l~~~~~~----~ 508 (708)
++|.+. +.||+|+||.||+|... +|+.||||++.. ...+.+|++++.+ .+||||+++++++.. .
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc---------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 567766 68999999999999654 689999999864 2346678888644 489999999999875 5
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---CCcEEEee
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL---EYEAHVAD 585 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~D 585 (708)
+..|+||||+++|+|.+++.... ...+++..++.++.||+.||+|||++ ||+||||||+|||++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 67899999999999999997643 24589999999999999999999999 9999999999999998 78999999
Q ss_pred cccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 665 (708)
||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+...
T Consensus 208 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----~~~~~~i~~~ 282 (400)
T 1nxk_A 208 FGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKTRIRMG 282 (400)
T ss_dssp CTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC----CSHHHHHHHT
T ss_pred cccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc----HHHHHHHHcC
Confidence 9999865432 2334567899999999999999999999999999999999999999743221110 0011111111
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+...+......+.+++.+||+.||++|||++|+++|-+
T Consensus 283 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 283 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred cccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 111111111223345889999999999999999999999865
No 115
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.9e-41 Score=337.88 Aligned_cols=251 Identities=24% Similarity=0.395 Sum_probs=206.1
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 6899999999999999999988888999999998632 22467899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||+++++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999997543 3589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 596 SS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 596 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.. ......++..|+|||.+.+..++.++||||+|+++|+|++ |+.||..... ......+........+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~i~~~~~~~~~~~ 229 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGFRLYKPRL 229 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCCCCCCTT
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--------HHHHHHHhcCCcCCCCcc
Confidence 11 1223456788999999998889999999999999999999 8999874321 111111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.||++|||++|++++|+
T Consensus 230 ---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 230 ---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1235788999999999999999999999885
No 116
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=9.4e-41 Score=366.41 Aligned_cols=252 Identities=24% Similarity=0.413 Sum_probs=206.7
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
..+|++.+.||+|+||.||+|.+. +++.||||.++... ...+.|.+|++++++++||||+++++++..++..++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-----cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 468999999999999999999775 48899999997532 235779999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 9999999999999975432 4589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCC
Q 039322 594 PESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RLPPP 670 (708)
Q Consensus 594 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 670 (708)
..... .....++..|+|||++.+..++.++||||||+++|||+| |+.||...... .....+... +...+
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~ 441 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLEKDYRMERP 441 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHHHHHHTTCCCCCC
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCC
Confidence 33221 223345789999999998899999999999999999999 99998743221 111111111 11111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ..+..+.+++.+||+.||++|||++++++.|+
T Consensus 442 -~---~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 442 -E---GCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp -T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -C---CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1 12235788999999999999999999999875
No 117
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2e-40 Score=346.27 Aligned_cols=256 Identities=21% Similarity=0.371 Sum_probs=205.6
Q ss_pred hccccccceeccccCccEEEEEe--------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL--------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFC 505 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~ 505 (708)
.++|++.+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|+++++++ +||||+++++++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 47899999999999999999975 346789999997632 234567899999999999 899999999999
Q ss_pred eeCCeeEEEEEeccCCCHHHHhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 039322 506 SHARHSFLVYELLERGSLAAILSSDTA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKN 572 (708)
Q Consensus 506 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 572 (708)
..++..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ ||+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence 999999999999999999999976542 23489999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccc
Q 039322 573 LLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLIS 649 (708)
Q Consensus 573 ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~ 649 (708)
|+++.++.+||+|||++......... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~- 266 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE- 266 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-
Confidence 99999999999999999876543321 233456789999999988889999999999999999999 99998743211
Q ss_pred ccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+.......... .....+.+++.+||+.||++|||++|++++|+
T Consensus 267 -------~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 267 -------ELFKLLKEGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp -------HHHHHHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------HHHHHHhcCCCCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111111111111 12235888999999999999999999999875
No 118
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.5e-41 Score=361.59 Aligned_cols=263 Identities=21% Similarity=0.249 Sum_probs=209.1
Q ss_pred HHHHHHHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe
Q 039322 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS 506 (708)
Q Consensus 428 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~ 506 (708)
+.++....++|++.++||+|+||.||+|..+ +++.||+|++.+.. .........+.+|..++..++||||++++++|.
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-MLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-HHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHH-hhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 3455556789999999999999999999765 57899999986410 001112234888999999999999999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 507 HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
+++..|+||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 9999999999999999999997532 4589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCc-cccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 039322 587 GIAKFLKPESSN-WTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 587 g~a~~~~~~~~~-~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
|+|+........ .....||+.|+|||++. .+.++.++|||||||++|||++|+.||..... .....
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~--------~~~~~ 291 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYG 291 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHH
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh--------hHHHH
Confidence 999866544332 23467999999999987 45689999999999999999999999974321 11111
Q ss_pred cccC----CCCCCCCchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhh
Q 039322 661 EILD----PRLPPPSRSVQEKLISIMEVAFSCLNESPES--RPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~ 707 (708)
.++. ..++..... ....+.+++.+|+..+|++ ||+++|+++|-+
T Consensus 292 ~i~~~~~~~~~p~~~~~---~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf 341 (437)
T 4aw2_A 292 KIMNHKERFQFPTQVTD---VSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341 (437)
T ss_dssp HHHTHHHHCCCCSSCCC---SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred hhhhccccccCCccccc---CCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence 1111 111111111 1234778999999999988 999999998854
No 119
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.5e-41 Score=343.07 Aligned_cols=255 Identities=23% Similarity=0.383 Sum_probs=208.8
Q ss_pred HHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
...++|++.+.||+|+||.||+|... +++.||+|.+... ....+.+.+|++++++++||||+++++++.+++..
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 35588999999999999999999765 4889999998753 23467789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++++|.+++..... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++..
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred EEEEEcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcccee
Confidence 999999999999999976432 4589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCC
Q 039322 592 LKPESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 592 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
....... .....+++.|+|||.+.+..++.++||||+|+++|+|++ |..||...... .....+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--------~~~~~~~~~~~~~ 232 (288)
T 3kfa_A 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLEKDYRME 232 (288)
T ss_dssp SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHHHHHHTTCCCC
T ss_pred ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHhccCCCC
Confidence 6543322 233456789999999998899999999999999999999 99998743221 1111111111111
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+. ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 233 ~~~---~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 233 RPE---GCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC---CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 111 12235889999999999999999999999874
No 120
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.2e-40 Score=339.60 Aligned_cols=258 Identities=22% Similarity=0.302 Sum_probs=205.8
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcc--hhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCD--QIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
.++|++.+.||+|+||.||+|... +++.||+|.++...... .....+.+.+|++++++++||||+++++++.+++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 367999999999999999999765 68999999987532211 112367899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC----cEEEeecc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY----EAHVADFG 587 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 587 (708)
++||||+++++|.+++... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 9999999999999999653 3489999999999999999999999 999999999999998877 89999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
++....... ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+.....
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~ 228 (283)
T 3bhy_A 158 IAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--------QETLTNISAVNY 228 (283)
T ss_dssp TCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTCC
T ss_pred cceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--------HHHHHHhHhccc
Confidence 998765332 23445689999999999988899999999999999999999999874321 111122222222
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..........+..+.+++.+||+.||++|||++|+++|-+
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 268 (283)
T 3bhy_A 229 DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSW 268 (283)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHH
T ss_pred CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHH
Confidence 1111111222346889999999999999999999998743
No 121
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=346.16 Aligned_cols=250 Identities=21% Similarity=0.348 Sum_probs=205.5
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcch----hHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQ----IADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
..++|++.+.||+|+||.||+|.. .+++.||||++........ ......+.+|++++++++||||+++++++.++
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 357899999999999999999964 5788999999976432111 11234577899999999999999999999999
Q ss_pred CeeEEEEEeccCC-CHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 509 RHSFLVYELLERG-SLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 509 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
+..++||||+.+| +|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999997543 489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
++....... ......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||..... .....
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~ 240 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEAA 240 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTTC
T ss_pred cceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhhc
Confidence 998765433 3345678999999999988776 7899999999999999999999873211 11111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
...+.. ....+.+++.+||+.||++|||++|++++-++
T Consensus 241 ~~~~~~----~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~ 278 (335)
T 3dls_A 241 IHPPYL----VSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278 (335)
T ss_dssp CCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTT
T ss_pred cCCCcc----cCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 111111 12358899999999999999999999998653
No 122
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.1e-40 Score=346.69 Aligned_cols=258 Identities=21% Similarity=0.361 Sum_probs=191.2
Q ss_pred HhccccccceeccccCccEEEEEeCCC----cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELPSG----QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
..++|++.+.||+|+||.||+|..... ..||||+++.... .....+.+.+|++++++++||||+++++++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 347899999999999999999976543 2799999976321 2244678999999999999999999999998776
Q ss_pred ee------EEEEEeccCCCHHHHhccccc---ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc
Q 039322 510 HS------FLVYELLERGSLAAILSSDTA---AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE 580 (708)
Q Consensus 510 ~~------~lv~e~~~~g~L~~~l~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 580 (708)
.. ++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ ||+||||||+||+++.++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 55 999999999999999965432 12589999999999999999999999 9999999999999999999
Q ss_pred EEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 039322 581 AHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI 657 (708)
Q Consensus 581 ~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~ 657 (708)
+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ..
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~ 247 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--------AE 247 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GG
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--------HH
Confidence 999999999866443322 223456789999999999999999999999999999999 9999874322 11
Q ss_pred ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.......... ..+..+.+++.+||+.||++|||+.++++.|+
T Consensus 248 ~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 248 IYNYLIGGNRLKQPP---ECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp HHHHHHTTCCCCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCC---ccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 122222221111111 12235889999999999999999988888764
No 123
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=349.29 Aligned_cols=254 Identities=22% Similarity=0.336 Sum_probs=199.1
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC--CceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH--RNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~l~~~~~~~~~~~ 512 (708)
.++|++.+.||+|+||.||+|...+++.||||++.... ......+.+.+|++++++++| +||+++++++..++..+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc--cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 36799999999999999999988889999999987532 233456789999999999986 99999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||| +.+|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||++...
T Consensus 86 lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 86 MVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 9999 56789999997643 489999999999999999999999 999999999999997 678999999999876
Q ss_pred CCCCCc--cccccccccccCcccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 039322 593 KPESSN--WTEFAGTYGYVAPELAYT-----------MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659 (708)
Q Consensus 593 ~~~~~~--~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 659 (708)
...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .....
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~ 230 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKL 230 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-------HHHHH
Confidence 543322 235679999999999865 6688899999999999999999999963211 11112
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....++........ .....+.+++.+||+.||++|||++|+++|-+
T Consensus 231 ~~~~~~~~~~~~~~--~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 231 HAIIDPNHEIEFPD--IPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp HHHHCTTSCCCCCC--CSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHhcCCcccCCcc--cCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 22222221111000 01235788999999999999999999998865
No 124
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8e-41 Score=350.16 Aligned_cols=251 Identities=28% Similarity=0.404 Sum_probs=202.5
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.+.|+..+.||+|+||.||+|.. .+|+.||||++..... ......+.+.+|++++++++||||+++++++..++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 131 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 131 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence 35689999999999999999965 5789999999875322 233455789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+. |++.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 132 v~e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EEECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EEecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 999997 58888885433 4589999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC-CC
Q 039322 594 PESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL-PP 669 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 669 (708)
.. ....||+.|+|||++. .+.++.++||||||+++|||++|+.||....... ....+..... ..
T Consensus 206 ~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 273 (348)
T 1u5q_A 206 PA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--------ALYHIAQNESPAL 273 (348)
T ss_dssp SB----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHSCCCCC
T ss_pred CC----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHhcCCCCC
Confidence 32 3457899999999884 5678999999999999999999999986432211 0111111111 11
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.... .+..+.+++.+||+.||++|||+++++++.+
T Consensus 274 ~~~~---~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 274 QSGH---WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp CCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred CCCC---CCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 1111 1235788999999999999999999998754
No 125
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2e-40 Score=338.69 Aligned_cols=254 Identities=28% Similarity=0.452 Sum_probs=200.3
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHh---HHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIAD---QKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
++|++.+.||+|+||.||+|.. .+++.||+|++........... .+.+.+|++++++++||||+++++++.++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 7899999999999999999965 5789999999876433222221 267899999999999999999999997665
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEccCCCCCeeeCCCCc-----EEEe
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP--IVHQDISSKNLLLDLEYE-----AHVA 584 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~~~~~-----~kl~ 584 (708)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ + ++||||||+||+++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 69999999999999886543 4589999999999999999999999 8 999999999999988876 9999
Q ss_pred ecccccccCCCCCccccccccccccCccccc--cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 039322 585 DFGIAKFLKPESSNWTEFAGTYGYVAPELAY--TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 585 Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
|||+++.... ......|++.|+|||.+. ...++.++||||+|+++|||++|+.||+......... ........
T Consensus 172 Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~ 246 (287)
T 4f0f_A 172 DFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEG 246 (287)
T ss_dssp CCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSC
T ss_pred CCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccC
Confidence 9999975432 334567899999999983 4557889999999999999999999997432110000 00000111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 663 LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+..+. ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 247 ~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 247 LRPTIPE------DCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp CCCCCCT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCc------ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1111111 12335889999999999999999999999875
No 126
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.9e-41 Score=352.65 Aligned_cols=269 Identities=22% Similarity=0.264 Sum_probs=207.7
Q ss_pred hHHHHHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-----CCceee
Q 039322 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-----HRNIVK 500 (708)
Q Consensus 427 ~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~~iv~ 500 (708)
++.+.....++|++.+.||+|+||.||+|.. .+++.||||+++.. ......+..|+++++.++ ||||++
T Consensus 26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 3334444568999999999999999999966 57899999998742 234566788999999996 999999
Q ss_pred EEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---
Q 039322 501 FYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL--- 577 (708)
Q Consensus 501 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~--- 577 (708)
+++++...+..++||||+ +++|.+++..... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 999999999999999999 8899999976542 3489999999999999999999999 9999999999999975
Q ss_pred ----------------------CCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHH
Q 039322 578 ----------------------EYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEA 635 (708)
Q Consensus 578 ----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el 635 (708)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 789999999999865432 2345789999999999999999999999999999999
Q ss_pred HhCCCCCCccccccccc-------cccccc--------c-----ccccCCCCCCCCchhH--------------HHHHHH
Q 039322 636 IKGKHPRDFLSLISSSS-------LNTDIA--------L-----DEILDPRLPPPSRSVQ--------------EKLISI 681 (708)
Q Consensus 636 ltg~~p~~~~~~~~~~~-------~~~~~~--------~-----~~~~~~~~~~~~~~~~--------------~~~~~l 681 (708)
++|+.||.......... ...... . ........+....... .....+
T Consensus 253 l~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (360)
T 3llt_A 253 YTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332 (360)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred HHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence 99999996432110000 000000 0 0000000111100000 011457
Q ss_pred HHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 682 MEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 682 ~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.+++.+||+.||++|||++|+++|-++
T Consensus 333 ~~li~~~L~~dP~~Rpta~elL~hp~f 359 (360)
T 3llt_A 333 CDFLYSILQIDPTLRPSPAELLKHKFL 359 (360)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred HHHHHHHhcCChhhCCCHHHHhcCccc
Confidence 799999999999999999999998653
No 127
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3e-40 Score=360.69 Aligned_cols=342 Identities=18% Similarity=0.127 Sum_probs=295.9
Q ss_pred cEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCC-CCccccCCCCccEEeccC
Q 039322 5 SILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSY-LPHNVCRGGALQYFGVSE 82 (708)
Q Consensus 5 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~-~~~~~~~l~~L~~L~l~~ 82 (708)
+.++.++++++.+ |. + .++|++|+|++|.+++..|..+.. ++|+.|++++|.+... .+..|..+++|++|+|++
T Consensus 13 ~~~~c~~~~l~~l-p~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLHQV-PE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCSSC-CC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcccC-CC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 4688899999854 44 3 378999999999999988888876 8999999999999744 467899999999999999
Q ss_pred CccccccCccCcCCCCCcEEEccCCcccccc--ccccCCCCCCCEEEcccCcceeeCCCC-CCCCCCCCEEEcccCcccc
Q 039322 83 NHFQGTIPKILRNCSSLIRVRLNSNNLTGNI--SEALGIYPNLTFIDLSRNDFYGEISSN-WGKCPKLGTLNVSMNNITG 159 (708)
Q Consensus 83 n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~--~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~L~~N~i~~ 159 (708)
|.+++..|..|.++++|++|+|++|++++.. ...|..+++|++|+|++|+++++.+.. +..+++|++|++++|.+++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 9999888999999999999999999999743 345999999999999999999887766 8899999999999999998
Q ss_pred cCCccccCC--CCCCEEecccccccccCCcc--------cCCCCCCCEEEccCccccccCCcccCCC---CCCCeEeccC
Q 039322 160 GIPREIGNS--SQLQALDLSLNHIVGEIPKE--------LGKLNSLTELILRGNQFTGRLPPEIGSL---VDLEYLDLSA 226 (708)
Q Consensus 160 ~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~--------~~~l~~L~~L~l~~n~l~~~~~~~~~~~---~~L~~L~l~~ 226 (708)
..+..+..+ .+|+.|++++|.+.+..+.. +..+++|++|++++|++++..+..+... ++|+.|++++
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~ 248 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSN 248 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTT
T ss_pred cChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecc
Confidence 888888776 78999999999998655443 3366899999999999998777766544 7899999999
Q ss_pred Cccccc----------CCCCCCc--cccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCce
Q 039322 227 NRFNNS----------VPENLGN--LLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKL 294 (708)
Q Consensus 227 N~i~~~----------~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L 294 (708)
|.+.+. .+..+.. .++|+.|++++|.+++..|..|..+++|+.|++++|.+++..+..+..+++|++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 328 (455)
T 3v47_A 249 SYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKL 328 (455)
T ss_dssp CTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEE
Confidence 866532 2222332 2689999999999999999999999999999999999998888899999999999
Q ss_pred ecccccccCCCCCcccccccccEEecCCCcCCCCCCC-ccccccCcccccccccCcC
Q 039322 295 NLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN-STAFRNAPVEALKGNKGLC 350 (708)
Q Consensus 295 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c 350 (708)
++++|++++..+..+..+++|+.|++++|.+++..|. ...+++++.+.+.+|....
T Consensus 329 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 329 NLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp ECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCcccc
Confidence 9999999988899999999999999999999987664 5567889999999997654
No 128
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.8e-40 Score=353.16 Aligned_cols=253 Identities=22% Similarity=0.337 Sum_probs=200.2
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc--CCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR--HRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~l~~~~~~~~~~~l 513 (708)
.+|++.+.||+|+||.||+|...+++.||||++.... ......+.+.+|++++++++ ||||+++++++..++..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc--ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 5699999999999999999988889999999987532 22345678999999999996 5999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||| +.+++|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||++....
T Consensus 134 v~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 999 56789999997543 488999999999999999999999 999999999999995 5899999999998765
Q ss_pred CCCC--ccccccccccccCcccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 039322 594 PESS--NWTEFAGTYGYVAPELAYT-----------MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 594 ~~~~--~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+.
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~ 278 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLH 278 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-------HHHHHH
Confidence 4332 2245679999999999865 3688899999999999999999999963211 111222
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.++......... ....+.+++.+||+.||++|||++|+++|-+
T Consensus 279 ~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 279 AIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp HHHCTTSCCCCCCC--SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHhCccccCCCCcc--chHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence 23332221111000 1235788999999999999999999998754
No 129
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-40 Score=344.20 Aligned_cols=262 Identities=24% Similarity=0.354 Sum_probs=198.0
Q ss_pred HHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc--cCCceeeEEEEEeeC
Q 039322 431 IVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI--RHRNIVKFYGFCSHA 508 (708)
Q Consensus 431 ~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~~iv~l~~~~~~~ 508 (708)
.....++|++.+.||+|+||.||+|... ++.||||++.. .....+..|.+++... +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~-------~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFT-------TEEASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEG-------GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEec-------cccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 3445589999999999999999999875 89999999854 2234455566665554 899999999999887
Q ss_pred ----CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEccCCCCCeeeCCCC
Q 039322 509 ----RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC-----FPPIVHQDISSKNLLLDLEY 579 (708)
Q Consensus 509 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~-----~~~ivH~dlk~~Nill~~~~ 579 (708)
...++||||+++|+|.++++.. .+++..++.++.|++.||+|||++. .+||+||||||+||+++.++
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CCCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC
Confidence 6889999999999999999653 3899999999999999999999762 23899999999999999999
Q ss_pred cEEEeecccccccCCCCCcc----ccccccccccCccccccCCCCcc------hhHHHHHHHHHHHHhC----------C
Q 039322 580 EAHVADFGIAKFLKPESSNW----TEFAGTYGYVAPELAYTMKITEK------CDVYSFGVLVLEAIKG----------K 639 (708)
Q Consensus 580 ~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~------~DvwslG~~l~elltg----------~ 639 (708)
.+||+|||++.......... ....||+.|+|||++.+...+.+ +|||||||++|||+|| +
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~ 259 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259 (337)
T ss_dssp CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence 99999999998665433221 24578999999999987766654 9999999999999999 4
Q ss_pred CCCCccccccccccccccccccccCCCCCCC-C--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 640 HPRDFLSLISSSSLNTDIALDEILDPRLPPP-S--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 640 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.||....... ................+. + .........+.+++.+||+.||++|||++|++++|+
T Consensus 260 ~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 260 LPYHDLVPSD---PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp CTTTTTSCSS---CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ccHhhhcCCC---CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 5543211100 000001111111111111 1 112355667999999999999999999999999985
No 130
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=9.8e-41 Score=362.44 Aligned_cols=252 Identities=26% Similarity=0.448 Sum_probs=201.1
Q ss_pred HhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
..++|++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 347899999999999999999998888889999997632 235679999999999999999999999876 67899
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 256 v~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 999999999999997532 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCC
Q 039322 594 PESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RLPPP 670 (708)
Q Consensus 594 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 670 (708)
..... .....++..|+|||.+.++.++.++||||||+++|||++ |+.||..... ......+... +.+.+
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~~~~ 403 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYRMPCP 403 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCCCCC
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCC
Confidence 33221 223456789999999998899999999999999999999 9999874321 1111111111 11111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ..+..+.+++.+||+.||++|||++++++.|+
T Consensus 404 -~---~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 404 -P---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp -T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -C---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1 12335888999999999999999999999875
No 131
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.8e-40 Score=346.67 Aligned_cols=254 Identities=22% Similarity=0.339 Sum_probs=209.2
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhh-cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 478999999999999999999664 588999999865321 123456788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.+++... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 119 v~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp EECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999998653 3489999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........|+..|+|||++.+..++.++||||||+++|+|++|+.||...... .....+.......+..
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~- 263 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKKNEYSIPKH- 263 (335)
T ss_dssp STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCCCCTT-
T ss_pred cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHhcCCCCCCcc-
Confidence 5444455667899999999999888999999999999999999999999743211 1111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.||++|||++|++++-+
T Consensus 264 ---~~~~~~~li~~~l~~dp~~Rps~~ell~~~~ 294 (335)
T 2owb_A 264 ---INPVAASLIQKMLQTDPTARPTINELLNDEF 294 (335)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence 1234778999999999999999999998743
No 132
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-41 Score=359.74 Aligned_cols=262 Identities=23% Similarity=0.239 Sum_probs=207.4
Q ss_pred HHHHHHHhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe
Q 039322 428 YDEIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS 506 (708)
Q Consensus 428 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~ 506 (708)
+.+.....++|++.+.||+|+||.||+|..+ +|+.||||++++.. .......+.+.+|.+++.+++||||+++++++.
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~-~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD-MLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-HHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-hhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 3444555789999999999999999999764 79999999986411 011122345888999999999999999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeec
Q 039322 507 HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADF 586 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 586 (708)
+++..|+||||+++|+|.+++...+ ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+||
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence 9999999999999999999997543 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCc-cccccccccccCccccc-------cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccc
Q 039322 587 GIAKFLKPESSN-WTEFAGTYGYVAPELAY-------TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIA 658 (708)
Q Consensus 587 g~a~~~~~~~~~-~~~~~~~~~y~aPE~~~-------~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~ 658 (708)
|++......... .....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ...
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--------~~~ 278 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST--------AET 278 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHH
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH--------HHH
Confidence 999876544332 23467999999999987 35689999999999999999999999974321 111
Q ss_pred cccccC----CCCCCCCchhHHHHHHHHHHHHhccCCCCCCC---CCHHHHHHHhh
Q 039322 659 LDEILD----PRLPPPSRSVQEKLISIMEVAFSCLNESPESR---PTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~l~ 707 (708)
...+.. ..++.. ....+.++.++|.+||. +|++| |+++|+++|-+
T Consensus 279 ~~~i~~~~~~~~~p~~---~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf 330 (412)
T 2vd5_A 279 YGKIVHYKEHLSLPLV---DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330 (412)
T ss_dssp HHHHHTHHHHCCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred HHHHHhcccCcCCCcc---ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence 111111 111110 01123357889999999 99998 69999998754
No 133
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.1e-40 Score=341.28 Aligned_cols=261 Identities=21% Similarity=0.320 Sum_probs=197.5
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... .......+.+.+|++++++++||||+++++++..++..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFD-LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTS-SCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhh-ccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 46899999999999999999965 579999999987522 2234556789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 514 VYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999996532 234589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
...........+++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .......+.....+...
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~- 259 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQCDYPPLP- 259 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC------HHHHHHHHHTTCSCCCC-
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh------HHHHHHHhhcccCCCCc-
Confidence 54444444567899999999999989999999999999999999999998632210 01111111111211111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.+++.+||+.||++|||++++++.|+
T Consensus 260 -~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 260 -SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp -TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 0112235889999999999999999999999875
No 134
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3e-40 Score=340.17 Aligned_cols=251 Identities=26% Similarity=0.400 Sum_probs=207.5
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
+.|+..+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 6799999999999999999965 5689999999875422 23467799999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.. ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.....
T Consensus 99 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999964 3489999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.........|++.|+|||.+.+..++.++||||||+++|+|++|+.||......... ........+....
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~----- 241 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-----FLIPKNNPPTLEG----- 241 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCCS-----
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH-----HHhhcCCCCCCcc-----
Confidence 444445567899999999999989999999999999999999999998743221100 0000001111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+..+.+++.+||+.||++|||++|++++.+
T Consensus 242 -~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 242 -NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp -SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred -ccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 11235889999999999999999999998754
No 135
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=9.8e-41 Score=366.76 Aligned_cols=256 Identities=25% Similarity=0.370 Sum_probs=211.3
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +|+.||||++..... ......+.+.+|++++++++||||+++++++.+.+..++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV-KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhc-ccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 468999999999999999999764 789999999865322 122346789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee---CCCCcEEEeeccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL---DLEYEAHVADFGIAK 590 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~ 590 (708)
||||+.+|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||++.
T Consensus 104 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999999986543 489999999999999999999999 99999999999999 567899999999998
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
.+.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+........
T Consensus 178 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~~~ 247 (484)
T 3nyv_A 178 HFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--------YDILKKVEKGKYTFE 247 (484)
T ss_dssp HBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCC
T ss_pred Eccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCC
Confidence 765433 3455679999999999866 689999999999999999999999974321 122223333333333
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+...+..+.+++.+||++||++|||++|+++|-+
T Consensus 248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 2233334456889999999999999999999998865
No 136
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.7e-40 Score=336.19 Aligned_cols=251 Identities=20% Similarity=0.303 Sum_probs=202.3
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--CeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~~ 512 (708)
.++|++.+.||+|+||.||+|... ++.||||++.... ......+.+.+|++++++++||||+++++++.++ +..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRD--WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTT--CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccc--cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 378999999999999999999884 8899999998642 2234567799999999999999999999999887 7889
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP--IVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ + ++||||||+||+++.++.++|+|||++.
T Consensus 86 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EEEECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred eeecccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEecccee
Confidence 99999999999999976442 3589999999999999999999998 8 9999999999999999999999999876
Q ss_pred ccCCCCCccccccccccccCccccccCCCCc---chhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITE---KCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
.... ....+|+.|+|||.+.+...+. ++||||||+++|||++|+.||......... .........+..
T Consensus 162 ~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~ 232 (271)
T 3kmu_A 162 SFQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG----MKVALEGLRPTI 232 (271)
T ss_dssp TTSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH----HHHHHSCCCCCC
T ss_pred eecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH----HHHHhcCCCCCC
Confidence 4332 2346789999999988765544 799999999999999999999743221100 000001111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+. ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 233 ~~------~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 233 PP------GISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp CT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 12235889999999999999999999999875
No 137
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.4e-40 Score=362.50 Aligned_cols=260 Identities=20% Similarity=0.299 Sum_probs=209.3
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|...+.||+|+||.||+|..+ +|+.||+|++.+.. .........+..|++++++++||||+++++++...+..|+|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~-~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR-LKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHH-HHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHH-hhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 68999999999999999999764 69999999986521 01112346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 515 YELLERGSLAAILSSDTA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
|||++||+|.+++..... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999975432 34589999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .........+.......+..
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~----~~~~~~~~~i~~~~~~~p~~- 415 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK----VENKELKQRVLEQAVTYPDK- 415 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC----CCHHHHHHHHHHCCCCCCTT-
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc----hhHHHHHHHHhhcccCCCcc-
Confidence 5544445568999999999999999999999999999999999999999743210 01111122222222222211
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTM-----KVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~l~ 707 (708)
.+..+.+++.+||++||++||++ +++++|-+
T Consensus 416 ---~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpf 451 (543)
T 3c4z_A 416 ---FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451 (543)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGG
T ss_pred ---cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCcc
Confidence 22357889999999999999964 77877643
No 138
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.5e-40 Score=344.73 Aligned_cols=263 Identities=20% Similarity=0.307 Sum_probs=200.5
Q ss_pred cccccc-ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeE
Q 039322 436 NDFDAQ-YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 436 ~~~~~~-~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~ 512 (708)
+.|++. +.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+++..+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS----SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc----chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 567774 7899999999999975 478999999997632 23456788999999885 7999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc---EEEeecccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVADFGIA 589 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~a 589 (708)
+||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 9999999999999997543 489999999999999999999999 9999999999999998776 999999999
Q ss_pred cccCCCCC-------ccccccccccccCcccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc---
Q 039322 590 KFLKPESS-------NWTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN--- 654 (708)
Q Consensus 590 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~--- 654 (708)
........ ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 76542211 1223458999999999875 45788999999999999999999999743221100000
Q ss_pred ----cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 655 ----TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 655 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.......+.......+..........+.+++.+||+.||++|||++|+++|-++
T Consensus 242 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~ 299 (316)
T 2ac3_A 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299 (316)
T ss_dssp CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTC
T ss_pred chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhh
Confidence 011112222222222211112234468899999999999999999999998654
No 139
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.4e-40 Score=357.52 Aligned_cols=260 Identities=22% Similarity=0.281 Sum_probs=196.3
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCc----chhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPC----DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
..++|.+.+.||+|+||.||+|.. .+++.||||++...... ........+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 457899999999999999999965 46899999998652110 111223358899999999999999999999854
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC---cEEEee
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY---EAHVAD 585 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~D 585 (708)
+..++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 56799999999999999986543 489999999999999999999999 999999999999997544 599999
Q ss_pred cccccccCCCCCccccccccccccCcccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYT---MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
||+++..... .......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||..... .......+
T Consensus 286 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-------~~~~~~~i 357 (419)
T 3i6u_A 286 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-------QVSLKDQI 357 (419)
T ss_dssp SSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS-------SCCHHHHH
T ss_pred cccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc-------hHHHHHHH
Confidence 9999876532 23345679999999999853 5678899999999999999999999973211 11111222
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 663 LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
........+.........+.+++.+||+.||++|||++|+++|-++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~ 403 (419)
T 3i6u_A 358 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403 (419)
T ss_dssp HTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred hcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCccc
Confidence 2222222222222334568899999999999999999999998653
No 140
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7e-42 Score=352.44 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=186.0
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHh--ccCCceeeEEEEEeeCC---
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE--IRHRNIVKFYGFCSHAR--- 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~~iv~l~~~~~~~~--- 509 (708)
.++|.+.+.||+|+||.||+|... |+.||||++... ....+.+|.+++.. ++||||+++++++..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 73 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSS
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcc
Confidence 368999999999999999999874 889999998652 24557778888877 78999999999998876
Q ss_pred -eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEccCCCCCeeeCCCCc
Q 039322 510 -HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH--------HDCFPPIVHQDISSKNLLLDLEYE 580 (708)
Q Consensus 510 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh--------~~~~~~ivH~dlk~~Nill~~~~~ 580 (708)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 74 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 74 TQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred ceeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCC
Confidence 789999999999999999653 3788889999999999999999 77 9999999999999999999
Q ss_pred EEEeecccccccCCCCCc----cccccccccccCccccccC------CCCcchhHHHHHHHHHHHHhC----------CC
Q 039322 581 AHVADFGIAKFLKPESSN----WTEFAGTYGYVAPELAYTM------KITEKCDVYSFGVLVLEAIKG----------KH 640 (708)
Q Consensus 581 ~kl~Dfg~a~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~elltg----------~~ 640 (708)
+||+|||++......... .....||+.|+|||++.+. .++.++||||||+++|||++| +.
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCC
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeec
Confidence 999999999766543332 1334789999999998776 344689999999999999999 55
Q ss_pred CCCccccccccccccccccccccCCCCCCCCc---hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 641 PRDFLSLISSSSLNTDIALDEILDPRLPPPSR---SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 641 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
||....... ................+... ........+.+++.+||+.||++|||++|+++.|+
T Consensus 227 p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 293 (303)
T 3gxj_A 227 PYYDLVPSD---PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp TTTTTCC-C---CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred cccccCCCC---ccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 554221100 01111112222222221111 11245567899999999999999999999999885
No 141
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.6e-40 Score=334.78 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=203.4
Q ss_pred ccccccc-eeccccCccEEEEEeC---CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQY-CIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~-~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
++|.+.. .||+|+||.||+|... +++.||||+++... .....+.+.+|++++++++||||+++++++ ..+..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCc
Confidence 5666666 8999999999999653 57789999998642 234567899999999999999999999999 55678
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 99999999999999996433 4589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 039322 592 LKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 592 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~~~i~~~~~ 231 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------PEVMAFIEQGKR 231 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--------HHHHHHHHTTCC
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHhcCCc
Confidence 6544332 123346789999999988889999999999999999998 9999874321 111111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+. ..+..+.+++.+||+.||++||++.|++++|+
T Consensus 232 ~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 232 MECPP---ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC---CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 12345889999999999999999999999885
No 142
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.5e-40 Score=337.37 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=199.3
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR---SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG---CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc---cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence 37899999999999999999965 468899999987532 12235778999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee---CCCCcEEEeecccc
Q 039322 514 VYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL---DLEYEAHVADFGIA 589 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a 589 (708)
||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 999999999999986432 234589999999999999999999999 99999999999999 45678999999999
Q ss_pred cccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
...... .......+++.|+|||.+. +.++.++||||+|+++|||++|+.||.......... ......+....
T Consensus 175 ~~~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~------~~~~~~~~~~~ 246 (285)
T 3is5_A 175 ELFKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ------KATYKEPNYAV 246 (285)
T ss_dssp CC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHHHCCCCCCC
T ss_pred eecCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHh------hhccCCccccc
Confidence 866533 2334567899999999875 468899999999999999999999997432211000 00001111111
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.... ....+.+++.+||+.||++|||++|++++-+
T Consensus 247 ~~~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 281 (285)
T 3is5_A 247 ECRP---LTPQAVDLLKQMLTKDPERRPSAAQVLHHEW 281 (285)
T ss_dssp --CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHTSGG
T ss_pred ccCc---CCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence 1000 1235778999999999999999999998755
No 143
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-40 Score=342.39 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=198.4
Q ss_pred ccccccceeccccCccEEEEEeCC-----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS-----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.+|...+.||+|+||.||+|.... +..||||.++... .......+.+|++++++++||||+++++++...+.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 577888999999999999996542 2359999997632 23456679999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 999999999999999997543 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC
Q 039322 591 FLKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 591 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~~~~~~ 267 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMKAINDGF 267 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHCCC
Confidence 76543221 122345778999999998899999999999999999999 9999864321 11112222221
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+... ..+..+.+++.+||+.||++||+++|++++|+
T Consensus 268 ~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 268 RLPTPM---DCPSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp CCCCCT---TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred cCCCcc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 12335889999999999999999999999875
No 144
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.1e-40 Score=341.41 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=203.9
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|.+.+.||+|+||.||+|... +|+.||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP----AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc----ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 478999999999999999999764 78999999997532 2234578899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee---CCCCcEEEeeccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL---DLEYEAHVADFGIAK 590 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~ 590 (708)
||||+++++|.+++.... .+++..++.++.|++.||+|||++ |++||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999999986543 489999999999999999999999 99999999999999 778999999999997
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
.... .......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ......+.......+
T Consensus 158 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~~~~~ 227 (304)
T 2jam_A 158 MEQN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--------SKLFEKIKEGYYEFE 227 (304)
T ss_dssp CCCC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHCCCCCC
T ss_pred ecCC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCC
Confidence 5432 223445689999999999998999999999999999999999999864221 111111111111111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+..+.+++.+||+.||++|||++|+++|-+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 1111222346889999999999999999999998754
No 145
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.9e-40 Score=333.18 Aligned_cols=257 Identities=24% Similarity=0.325 Sum_probs=206.5
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG---CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc---chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEE
Confidence 3478999999999999999999764 78999999986422 1234577899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++++|.+++... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+...
T Consensus 82 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 999999999999998654 3489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC--CccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 593 KPES--SNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 593 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
.... .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||+..... ......+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~ 228 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-------CQEYSDWKEKKTYL 228 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT-------SHHHHHHHTTCTTS
T ss_pred CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH-------HHHHHHhhhccccc
Confidence 4322 12344578999999999887665 67899999999999999999999743211 01111111111111
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
. ........+.+++.+||+.||++|||++|++++-++
T Consensus 229 ~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 265 (276)
T 2yex_A 229 N--PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265 (276)
T ss_dssp T--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred C--chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccc
Confidence 1 111223457889999999999999999999987653
No 146
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=353.58 Aligned_cols=266 Identities=21% Similarity=0.298 Sum_probs=208.9
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC--ee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR--HS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~ 511 (708)
.++|.+.+.||+|+||.||+|... +|+.||||++... ......+.+.+|++++++++||||+++++++...+ ..
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNI---SFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGG---GGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccc---cccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 368999999999999999999764 5899999998752 12234567889999999999999999999998765 78
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee----CCCCcEEEeecc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL----DLEYEAHVADFG 587 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg 587 (708)
++||||+++|+|.+++........+++..++.++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 99999999999999998766555589999999999999999999999 99999999999999 777889999999
Q ss_pred cccccCCCCCccccccccccccCcccccc--------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-----
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYT--------MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN----- 654 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~----- 654 (708)
+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............
T Consensus 162 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 162 AARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp GCEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred CceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 998765432 2344678999999998865 45778999999999999999999998632211000000
Q ss_pred ------ccccccc------ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 ------TDIALDE------ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 ------~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....... ......+............+.+++.+||+.||++||+++|+++.++
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 0000000 0111222222333556677889999999999999999999988764
No 147
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=368.78 Aligned_cols=349 Identities=19% Similarity=0.162 Sum_probs=241.6
Q ss_pred CCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEecc
Q 039322 3 SLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVS 81 (708)
Q Consensus 3 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~ 81 (708)
++++|||++|+|+.+.+..|.++++|++|+|++|++++..+..|.. ++|+.|++++|.+++..+..|..+++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 4556666666666555555666666666666666665555555543 556666666666555555555555555555555
Q ss_pred CCccccccCccCcCCCCCcEEEccCCccccc-cccccCCCCCCCEEEcccCcceeeC-----------------------
Q 039322 82 ENHFQGTIPKILRNCSSLIRVRLNSNNLTGN-ISEALGIYPNLTFIDLSRNDFYGEI----------------------- 137 (708)
Q Consensus 82 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~~~~~~~L~~L~l~~n~l~~~~----------------------- 137 (708)
+|.+++..+..++++++|++|++++|.++++ .+..|.++++|++|++++|+++++.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 5555544444455555555555555555543 2445555555555555555544332
Q ss_pred -----CCC------------------------------------------------------------------------
Q 039322 138 -----SSN------------------------------------------------------------------------ 140 (708)
Q Consensus 138 -----~~~------------------------------------------------------------------------ 140 (708)
+..
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence 221
Q ss_pred ---------CCCCCCCCEEEcccCcccccCCccc------------------------------------------cCCC
Q 039322 141 ---------WGKCPKLGTLNVSMNNITGGIPREI------------------------------------------GNSS 169 (708)
Q Consensus 141 ---------~~~l~~L~~L~L~~N~i~~~~~~~~------------------------------------------~~l~ 169 (708)
+..+++|+.|++++|.++. .|..+ ..++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 347 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 347 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCT
T ss_pred hhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCC
Confidence 2223455555555555542 23222 2345
Q ss_pred CCCEEecccccccccC--CcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCC-CCCCccccceee
Q 039322 170 QLQALDLSLNHIVGEI--PKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVP-ENLGNLLKLHYL 246 (708)
Q Consensus 170 ~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L 246 (708)
+|++|++++|++++.. +..+..+++|++|++++|.+++..+ .+..+++|++|++++|.+++..+ ..+..+++|+.|
T Consensus 348 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 5555556566555332 4456667777777777777774443 38888899999999999887665 568899999999
Q ss_pred cccCcccccCCChhhhhhcccchhhcccccCC-CCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcC
Q 039322 247 GLSNNQFVLELPKELEKLVQLSELDASHNLFG-GEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQL 325 (708)
Q Consensus 247 ~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~-~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 325 (708)
++++|.+++..+..|.++++|+.|++++|.++ +..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 506 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL 506 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcC
Confidence 99999999889999999999999999999997 46788899999999999999999988899999999999999999999
Q ss_pred CCCCCC-ccccccCcccccccccCcCCCC
Q 039322 326 QGPVPN-STAFRNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 326 ~~~~~~-~~~~~~~~~~~~~~n~~~c~~~ 353 (708)
++.++. ...++.++.+.+.+|++.|+|+
T Consensus 507 ~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 507 KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 998775 4567889999999999999986
No 148
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=342.02 Aligned_cols=269 Identities=25% Similarity=0.329 Sum_probs=201.1
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcc-hhHhHHHHHHHHHHHHhcc---CCceeeEEEEEeeC
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCD-QIADQKEFLIEVKALTEIR---HRNIVKFYGFCSHA 508 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~---h~~iv~l~~~~~~~ 508 (708)
..++|++.+.||+|+||.||+|.. .+++.||||++....... .......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357999999999999999999975 578999999986422111 1112345667777777664 99999999999875
Q ss_pred C-----eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 039322 509 R-----HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHV 583 (708)
Q Consensus 509 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 583 (708)
. ..++||||+. |+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 5 5799999997 599999976543 3489999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc---------
Q 039322 584 ADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN--------- 654 (708)
Q Consensus 584 ~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~--------- 654 (708)
+|||++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||............
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999999866533 2335567899999999999999999999999999999999999999643221100000
Q ss_pred ----ccccc-ccccCCCCCCC-CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 655 ----TDIAL-DEILDPRLPPP-SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 655 ----~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
..... .....+..+.. ..........+.+++.+||+.||++|||++|+++|-++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~ 300 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccc
Confidence 00000 00000000000 00001123467899999999999999999999998653
No 149
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=349.93 Aligned_cols=263 Identities=17% Similarity=0.234 Sum_probs=195.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +++.||+|++..... ......+.+|++++++++||||+++++++..++..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc---cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 57999999999999999999764 789999999875321 11122455799999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||++ |+|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 79 ~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp EECCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ecccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 99997 49999887543 4589999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc----------------ccccc
Q 039322 595 ESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS----------------LNTDI 657 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~----------------~~~~~ 657 (708)
.........+|+.|+|||++.+ ..++.++||||+|+++|+|++|+.||.......... .....
T Consensus 153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcch
Confidence 4444556678999999998876 568999999999999999999999997532111000 00000
Q ss_pred ccccccCCCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+...... .........+.+++.+||+.||++|||++|+++|-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 284 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence 00000001110000 000112345789999999999999999999998765
No 150
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-40 Score=342.17 Aligned_cols=257 Identities=22% Similarity=0.333 Sum_probs=197.0
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||+|++..... ......+.+.+|++++++++||||+++++++..++..++
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-SDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 478999999999999999999764 688999999875321 222345788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.+++... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 112 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999999754 3489999999999999999999999 99999999999999999999999999998664
Q ss_pred CCC-CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 594 PES-SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 594 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
... .......+++.|+|||.+.+..++.++||||||+++|||++|+.||...... ...............
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~~~~~~~~~~~~~~ 256 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---------VMGAHINQAIPRPST 256 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---------HHHHHHHSCCCCGGG
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---------HHHHHhccCCCCccc
Confidence 432 2233457899999999999888999999999999999999999999743221 011111111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRP-TMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~l~ 707 (708)
.....+..+.+++.+||+.||++|| +++++++.|+
T Consensus 257 ~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 257 VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 1112223588899999999999999 9999998874
No 151
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.5e-40 Score=345.90 Aligned_cols=266 Identities=19% Similarity=0.262 Sum_probs=207.9
Q ss_pred hHHHHHHHhcccccc-ceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEE
Q 039322 427 VYDEIVRATNDFDAQ-YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYG 503 (708)
Q Consensus 427 ~~~~~~~~~~~~~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~ 503 (708)
.+.......+.|.+. +.||+|+||.||+|... +++.||+|++..... .......+.+|+.++++++ ||||+++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR--GQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET--TEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 344455566788887 88999999999999654 689999999876322 1234677899999999995 699999999
Q ss_pred EEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---CCc
Q 039322 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL---EYE 580 (708)
Q Consensus 504 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~ 580 (708)
++..++..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ ||+||||||+||+++. ++.
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 97 VYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred EEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 9999999999999999999999986533 34589999999999999999999999 9999999999999988 789
Q ss_pred EEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 039322 581 AHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 581 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
+||+|||++....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ....
T Consensus 173 ~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~ 243 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--------ETYL 243 (327)
T ss_dssp EEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHH
T ss_pred EEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--------HHHH
Confidence 9999999998765332 234467899999999999999999999999999999999999999743211 1111
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+..................+.+++.+||+.||++|||++|+++|-+
T Consensus 244 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~ 290 (327)
T 3lm5_A 244 NISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSW 290 (327)
T ss_dssp HHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred HHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHh
Confidence 11111111111111222345788999999999999999999998765
No 152
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.2e-40 Score=334.80 Aligned_cols=253 Identities=20% Similarity=0.378 Sum_probs=204.8
Q ss_pred HhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
..++|++.+.||+|+||.||+|...+++.||+|.+.... ...+.+.+|++++++++||||+++++++.. +..++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-----ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence 347899999999999999999998888899999987532 235678999999999999999999999864 56899
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.+++.... ...+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++....
T Consensus 85 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (279)
T ss_dssp EEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence 999999999999997543 23589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 594 PESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 594 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
..... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.........
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~ 232 (279)
T 1qpc_A 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLERGYRMVRP 232 (279)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCCCCCC
T ss_pred CcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHhcccCCCCc
Confidence 43221 233456788999999988889999999999999999999 99998743211 111111111111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ..+..+.+++.+||+.||++|||++++++.|+
T Consensus 233 ~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 233 D---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred c---cccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 1 12235889999999999999999999998874
No 153
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.2e-40 Score=340.43 Aligned_cols=256 Identities=18% Similarity=0.244 Sum_probs=204.1
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~ 512 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+++++++ +|++++++++++..+...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 82 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS------DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 82 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT------TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC------ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence 36799999999999999999974 579999999986532 233577899999999 7999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc-----EEEeecc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE-----AHVADFG 587 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg 587 (708)
+||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++. +||+|||
T Consensus 83 lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 999999 999999997543 3589999999999999999999999 9999999999999987776 9999999
Q ss_pred cccccCCCCC-------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 039322 588 IAKFLKPESS-------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 588 ~a~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
++........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----~~~~~ 231 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-----KQKYE 231 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-----HHHHH
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-----HHHHH
Confidence 9987654332 12445789999999999998999999999999999999999999975321110 01111
Q ss_pred cccCCCCCCC-CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPP-SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.......+ .......+..+.+++.+||+.||++|||+++|++.|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 232 RIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 1100000000 0000112346889999999999999999999999874
No 154
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.2e-40 Score=346.39 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=197.4
Q ss_pred ccccccceeccccCccEEEEEeC-CCcE----EEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQV----VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
++|++.+.||+|+||.||+|.+. +++. ||+|.+..... ......+.+|+.++++++||||+++++++. ++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG---RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS---CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSS
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCc
Confidence 68999999999999999999753 4443 88888764321 122345678999999999999999999986 456
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred cEEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 889999999999999997643 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 039322 591 FLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 591 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
....... ......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .....+.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~ 235 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--------EVPDLLEKGER 235 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--------HHHHHHHTTCB
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--------HHHHHHHcCCC
Confidence 7754432 2344567889999999999999999999999999999999 99999743211 11111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+.. ....+.+++.+||+.||++|||++|++++|+
T Consensus 236 ~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 236 LAQPQI---CTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CCCCTT---BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCCCCc---CcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 1124778999999999999999999999874
No 155
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-40 Score=349.81 Aligned_cols=253 Identities=25% Similarity=0.378 Sum_probs=191.7
Q ss_pred ccccccceeccccCccEEEEEeC--CC--cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee-CCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP--SG--QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH-ARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~~~ 510 (708)
..|.+.+.||+|+||.||+|... ++ ..||+|.++.. ......+.+.+|+.++++++||||+++++++.. ++.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC---SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCC
Confidence 45778889999999999999653 22 36899998753 223456789999999999999999999998754 567
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence 899999999999999997543 4578999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc----cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC
Q 039322 591 FLKPESSN----WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP 665 (708)
Q Consensus 591 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 665 (708)
........ .....+++.|+|||.+.+..++.++||||||+++|||+| |..||...... .....+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--------~~~~~~~~~ 312 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--------DITVYLLQG 312 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--------CHHHHHHTT
T ss_pred cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--------HHHHHHHcC
Confidence 65433211 233456789999999999999999999999999999999 67777632211 111111121
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+.. .+..+.+++.+||+.||++|||++|++++|+
T Consensus 313 ~~~~~p~~---~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 313 RRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 1235888999999999999999999999875
No 156
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.8e-40 Score=340.33 Aligned_cols=261 Identities=20% Similarity=0.337 Sum_probs=203.7
Q ss_pred ccccccceeccccCccEEEEEe-----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA-- 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-- 508 (708)
..|++.+.||+|+||.||+|.+ .+++.||+|++.... .....+.+.+|++++++++||||+++++++..+
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 5689999999999999999973 468899999997532 223457789999999999999999999999876
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 66899999999999999996543 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccc-------cccccccccc
Q 039322 589 AKFLKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLI-------SSSSLNTDIA 658 (708)
Q Consensus 589 a~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-------~~~~~~~~~~ 658 (708)
+......... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.|+...... ..........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 9877654432 23456788899999999988999999999999999999999986532110 0000000111
Q ss_pred cccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..........+.+. ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 253 ~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 253 VNTLKEGKRLPCPP---NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHHHHTTCCCCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhccCCCCCCC---CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 11111111111111 12235889999999999999999999999875
No 157
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.6e-40 Score=334.68 Aligned_cols=252 Identities=22% Similarity=0.326 Sum_probs=202.9
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCee
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~ 511 (708)
..++|++.+.||+|+||.||+|... +++.||+|++...... ......+.+|+..+.++ +||||+++++++.+++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG--SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT--SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 3478999999999999999999765 7999999999864322 23466788999999999 899999999999999999
Q ss_pred EEEEEeccCCCHHHHhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC------------
Q 039322 512 FLVYELLERGSLAAILSSDTA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE------------ 578 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~------------ 578 (708)
++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ ||+||||||+||+++.+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence 999999999999999976432 24589999999999999999999999 99999999999999844
Q ss_pred -------CcEEEeecccccccCCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccc
Q 039322 579 -------YEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS 650 (708)
Q Consensus 579 -------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~ 650 (708)
..+||+|||.+....... ...|++.|+|||.+.+. .++.++||||||+++|+|++|..|+.....
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--- 236 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--- 236 (289)
T ss_dssp ------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---
T ss_pred ccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---
Confidence 479999999998765432 24589999999998765 566799999999999999999987642211
Q ss_pred cccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 651 SSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
...+.....+..+.. ....+.+++.+||+.||++|||++|+++|-++
T Consensus 237 --------~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~ 283 (289)
T 1x8b_A 237 --------WHEIRQGRLPRIPQV---LSQEFTELLKVMIHPDPERRPSAMALVKHSVL 283 (289)
T ss_dssp --------HHHHHTTCCCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC
T ss_pred --------HHHHHcCCCCCCCcc---cCHHHHHHHHHHhCCCcccCCCHHHHhhChHh
Confidence 111122222111111 12358899999999999999999999998654
No 158
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.7e-40 Score=333.67 Aligned_cols=253 Identities=21% Similarity=0.337 Sum_probs=200.1
Q ss_pred hccccccceeccccCccEEEEEeCC----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.++|++.+.||+|+||.||+|.... +..||+|.+.... .....+.+.+|++++++++||||+++++++.+ +.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~ 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC
Confidence 4789999999999999999996532 3469999987642 23456789999999999999999999999865 45
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred CEEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCc
Confidence 689999999999999996543 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCC
Q 039322 591 FLKPESS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 591 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--------~~~~~~~~~~~ 233 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--------VIGVLEKGDRL 233 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--------HHHHHHHTCCC
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--------HHHHHhcCCCC
Confidence 7654322 2233456789999999998899999999999999999998 999986432211 11111111111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.+.. .+..+.+++.+||+.||++|||++|++++|+
T Consensus 234 ~~~~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 234 PKPDL---CPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp CCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC---CCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 11111 1235889999999999999999999999885
No 159
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.9e-40 Score=337.75 Aligned_cols=257 Identities=23% Similarity=0.403 Sum_probs=192.7
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
.++|++.+.||+|+||.||+|... ..||+|+++... ......+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTA--PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccC--CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 478999999999999999999864 359999997543 2334567899999999999999999999965 45568999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 98 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 98 TQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999999996543 4589999999999999999999999 999999999999999999999999999986543
Q ss_pred C--CCccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 595 E--SSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 595 ~--~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
. ........|++.|+|||.+. +..++.++||||||+++|+|++|+.||......... ..........+....
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~ 249 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IEMVGRGSLSPDLSK 249 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH---HHHHHHTSCCCCTTS
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH---HHHhcccccCcchhh
Confidence 2 22234467899999999886 566888999999999999999999999743211000 000001111111111
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+..+.+++.+||+.||++|||++|+++.|+
T Consensus 250 ---~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 250 ---VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp ---SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 11122346889999999999999999999999875
No 160
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-40 Score=353.47 Aligned_cols=264 Identities=22% Similarity=0.336 Sum_probs=192.5
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCC--
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHAR-- 509 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~-- 509 (708)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++++. ||||+++++++..++
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 457899999999999999999965 578999999987532 23345677889999999997 999999999997654
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
..|+||||++ |+|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+|
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 7899999998 5899998653 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC---------------------CCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 039322 590 KFLKPE---------------------SSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSL 647 (708)
Q Consensus 590 ~~~~~~---------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~ 647 (708)
+.+... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 865321 112244579999999999876 6789999999999999999999999974322
Q ss_pred ccccccc-------ccccccccc------------------CCCCCCCCchhH----------HHHHHHHHHHHhccCCC
Q 039322 648 ISSSSLN-------TDIALDEIL------------------DPRLPPPSRSVQ----------EKLISIMEVAFSCLNES 692 (708)
Q Consensus 648 ~~~~~~~-------~~~~~~~~~------------------~~~~~~~~~~~~----------~~~~~l~~li~~cl~~d 692 (708)
....... .......+. ..........+. .....+.+++.+||+.|
T Consensus 237 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 1100000 000000000 000000000000 11235789999999999
Q ss_pred CCCCCCHHHHHHHhh
Q 039322 693 PESRPTMKVVTQQVR 707 (708)
Q Consensus 693 P~~RPs~~evl~~l~ 707 (708)
|++|||++|+++|-+
T Consensus 317 P~~R~t~~e~l~Hp~ 331 (388)
T 3oz6_A 317 PNKRISANDALKHPF 331 (388)
T ss_dssp GGGSCCHHHHTTSTT
T ss_pred cccCCCHHHHhCCHH
Confidence 999999999998854
No 161
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.5e-41 Score=367.07 Aligned_cols=259 Identities=20% Similarity=0.251 Sum_probs=208.1
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +|+.||+|++.+.. .........+.+|++++++++||||+++++++.+++..++
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~-~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR-IKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-HHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHh-hhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 478999999999999999999764 79999999986421 0111234668899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||++||+|.+++.... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 262 VmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999999997644 23489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........+.......+
T Consensus 338 ~~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~----~~~~i~~~i~~~~~~~p--- 409 (576)
T 2acx_A 338 EGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI----KREEVERLVKEVPEEYS--- 409 (576)
T ss_dssp TTC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC----CHHHHHHHHHHCCCCCC---
T ss_pred cCc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch----hHHHHHHHhhcccccCC---
Confidence 432 3345689999999999999889999999999999999999999997432110 00111111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~ 707 (708)
......+.+++.+||++||++|| +++|+++|-+
T Consensus 410 -~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hpf 447 (576)
T 2acx_A 410 -ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447 (576)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGG
T ss_pred -ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChh
Confidence 11223578899999999999999 7899998754
No 162
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.2e-40 Score=347.12 Aligned_cols=265 Identities=19% Similarity=0.254 Sum_probs=195.1
Q ss_pred HHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
...++|++.+.||+|+||.||+|.. .+++.||||+++... ........+.+|++++++++||||+++++++.+++..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH--EEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc--cccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 3457899999999999999999964 578999999997542 2223356678999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-----CCCcEEEeec
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD-----LEYEAHVADF 586 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-----~~~~~kl~Df 586 (708)
++||||+++ +|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++ .++.+||+||
T Consensus 109 ~lv~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 109 HLIFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEEEECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEEEecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 999999985 9999997554 389999999999999999999999 999999999999994 4556999999
Q ss_pred ccccccCCCCCccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCcccccccccc------------
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL------------ 653 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~------------ 653 (708)
|++..............+|+.|+|||++.+.. ++.++|||||||++|||++|+.||...........
T Consensus 182 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 182 GLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT 261 (329)
T ss_dssp THHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred CCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhh
Confidence 99987765544555667899999999988754 79999999999999999999999974321100000
Q ss_pred -ccccccccccCCCCCCC-CchhH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 -NTDIALDEILDPRLPPP-SRSVQ-----EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 -~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+.. ..+.. ..... .....+.+++.+||+.||++|||++|+++|-+
T Consensus 262 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 321 (329)
T 3gbz_A 262 WPGVTALPDWKQ-SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321 (329)
T ss_dssp STTGGGSTTCCT-TCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred hhhhhhhhhhhh-hhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence 00000000000 00000 00001 02246789999999999999999999999765
No 163
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.9e-40 Score=363.31 Aligned_cols=258 Identities=22% Similarity=0.296 Sum_probs=206.9
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcch---------hHhHHHHHHHHHHHHhccCCceeeEEE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQ---------IADQKEFLIEVKALTEIRHRNIVKFYG 503 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~---------~~~~~~~~~e~~~l~~l~h~~iv~l~~ 503 (708)
..++|.+.+.||+|+||.||+|... +++.||+|++........ ....+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999764 688999999876321110 123567899999999999999999999
Q ss_pred EEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC---c
Q 039322 504 FCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY---E 580 (708)
Q Consensus 504 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~ 580 (708)
++.+++..++||||+++|+|.+++... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999998654 3489999999999999999999999 999999999999998776 6
Q ss_pred EEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 039322 581 AHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 581 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
+||+|||++...... .......||+.|+|||++. +.++.++||||+||++|+|++|+.||..... .....
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~ 257 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--------QDIIK 257 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHH
Confidence 999999999876543 3334567999999999876 4689999999999999999999999974321 22223
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 661 EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.......+...+...+..+.+++.+||+.||++|||++|+++|-+
T Consensus 258 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 304 (504)
T 3q5i_A 258 KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304 (504)
T ss_dssp HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence 33333333222222233456889999999999999999999998865
No 164
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.8e-39 Score=366.25 Aligned_cols=346 Identities=21% Similarity=0.188 Sum_probs=238.4
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
+++++|||++|+|+++.+..|.++++|++|+|++|++.++.|..|.. ++|+.|++++|.+.+..|..+..+++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 46788888888888888888888888888888888888887887765 78888888888888888888888888888888
Q ss_pred cCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCC--EEEcccCccc
Q 039322 81 SENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLG--TLNVSMNNIT 158 (708)
Q Consensus 81 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~--~L~L~~N~i~ 158 (708)
++|.+++..+..+.++++|++|++++|.++++....+..+++|++|++++|+++++.+..|..+++|+ .|++++|.++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 88888877677788888888888888888876656666688888888888888877777777777777 7777777777
Q ss_pred ccCCccccCC---------------------------------------------------CCCCEEecccccccccCCc
Q 039322 159 GGIPREIGNS---------------------------------------------------SQLQALDLSLNHIVGEIPK 187 (708)
Q Consensus 159 ~~~~~~~~~l---------------------------------------------------~~L~~L~L~~n~l~~~~~~ 187 (708)
+..+..|... .+|+.|++++|.+++..+.
T Consensus 193 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp EECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred ccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 6555444321 0455666666666655555
Q ss_pred ccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCC-hhhhhhcc
Q 039322 188 ELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELP-KELEKLVQ 266 (708)
Q Consensus 188 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~ 266 (708)
.|..+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+.+..+ ..+..+++
T Consensus 273 ~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 351 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTT
T ss_pred HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCc
Confidence 5666666666666666666 555566666666666666666665555556666666666666666553333 33556666
Q ss_pred cchhhcccccCCCCC--chhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCC--ccccccCcccc
Q 039322 267 LSELDASHNLFGGEI--PFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN--STAFRNAPVEA 342 (708)
Q Consensus 267 L~~L~ls~N~i~~~~--~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~--~~~~~~~~~~~ 342 (708)
|+.|++++|.+++.. +..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+++..+. ...++.++.+.
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 431 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLN 431 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEE
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEE
Confidence 666666666665433 44555566666666666666655556666666666666666666554332 23445555555
Q ss_pred cccccC
Q 039322 343 LKGNKG 348 (708)
Q Consensus 343 ~~~n~~ 348 (708)
+++|..
T Consensus 432 l~~n~l 437 (606)
T 3t6q_A 432 LSHSLL 437 (606)
T ss_dssp CTTCCC
T ss_pred CCCCcc
Confidence 555543
No 165
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.5e-40 Score=362.80 Aligned_cols=255 Identities=24% Similarity=0.339 Sum_probs=203.8
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||+|++...... ......+.+|+++++.++||||+++++++.+++..++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 468999999999999999999764 6889999999763211 2235678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC---CcEEEeeccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE---YEAHVADFGIAK 590 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~a~ 590 (708)
||||+++|+|.+++... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.. +.+||+|||++.
T Consensus 114 v~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 99999999999988654 3489999999999999999999999 99999999999999764 459999999998
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||..... ......+........
T Consensus 188 ~~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~~~ 257 (494)
T 3lij_A 188 VFENQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--------QEILRKVEKGKYTFD 257 (494)
T ss_dssp ECBTTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCC
T ss_pred ECCCCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 765432 334567999999999876 4689999999999999999999999974321 122222233333322
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+...+..+.+++.+||+.||++|||++|+++|-+
T Consensus 258 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~ 294 (494)
T 3lij_A 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294 (494)
T ss_dssp SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence 2223333456889999999999999999999998754
No 166
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.9e-40 Score=362.84 Aligned_cols=255 Identities=22% Similarity=0.341 Sum_probs=207.1
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||||++.... ........+.+|++++++++||||+++++++.+++..++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS--AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHH--HBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 478999999999999999999764 78999999986421 111235678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC---CCCcEEEeeccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD---LEYEAHVADFGIAK 590 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~a~ 590 (708)
||||+.+|+|.+++... ..+++..++.++.|++.||+|||++ ||+||||||+||+++ .++.+||+|||++.
T Consensus 99 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999988654 3489999999999999999999999 999999999999995 45679999999998
Q ss_pred ccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPP 670 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (708)
..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+........
T Consensus 173 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 173 CFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDILKRVETGKYAFD 242 (486)
T ss_dssp TBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCSC
T ss_pred ECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 76543 23345679999999999876 589999999999999999999999964321 122223333333333
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+...+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 243 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 279 (486)
T 3mwu_A 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279 (486)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHH
T ss_pred CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHh
Confidence 2333334456889999999999999999999999854
No 167
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.3e-40 Score=341.26 Aligned_cols=263 Identities=21% Similarity=0.349 Sum_probs=208.5
Q ss_pred HHHHHHhccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeE
Q 039322 429 DEIVRATNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKF 501 (708)
Q Consensus 429 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l 501 (708)
.+.....++|++.+.||+|+||.||+|.. .+++.||||+++... .......+.+|+++++++ +||||+++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34445568999999999999999999963 356889999997642 234456789999999999 69999999
Q ss_pred EEEEeeCC-eeEEEEEeccCCCHHHHhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcc
Q 039322 502 YGFCSHAR-HSFLVYELLERGSLAAILSSDTA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQD 567 (708)
Q Consensus 502 ~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~d 567 (708)
++++..++ ..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ |++|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99997765 58999999999999999976542 12278999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEeecccccccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCc
Q 039322 568 ISSKNLLLDLEYEAHVADFGIAKFLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDF 644 (708)
Q Consensus 568 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~ 644 (708)
|||+||+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999876543322 234567889999999999899999999999999999998 9999874
Q ss_pred cccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 645 LSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.... ......+........+.. ....+.+++.+||+.||++|||++|++++|+
T Consensus 254 ~~~~-------~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 254 VKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp CCCS-------HHHHHHHHHTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cchh-------HHHHHHhccCccCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 3211 011111111111111111 1235888999999999999999999999985
No 168
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.4e-40 Score=335.60 Aligned_cols=252 Identities=25% Similarity=0.384 Sum_probs=205.7
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||+|++.... .........+.+|++++++++||||+++++++.+++..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccc-cchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 378999999999999999999664 67889999986411 0111224678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... .+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 999999999999997543 489999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCch
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRS 673 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (708)
.. ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||+.... ......+.......+..
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~- 234 (284)
T 2vgo_A 166 SL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--------TETHRRIVNVDLKFPPF- 234 (284)
T ss_dssp SS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTCCCCCTT-
T ss_pred cc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH--------hHHHHHHhccccCCCCc-
Confidence 32 23345789999999999998899999999999999999999999974321 11112222222221111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 674 VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 674 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.||++|||++|+++|-+
T Consensus 235 ---~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~ 265 (284)
T 2vgo_A 235 ---LSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265 (284)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHHTCHH
T ss_pred ---CCHHHHHHHHHHhhcCHhhCCCHHHHhhCHH
Confidence 1235788999999999999999999998754
No 169
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=9.6e-40 Score=342.64 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=204.3
Q ss_pred HHHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHh--ccCCceeeEEEEEee
Q 039322 430 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTE--IRHRNIVKFYGFCSH 507 (708)
Q Consensus 430 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~~iv~l~~~~~~ 507 (708)
......++|++.+.||+|+||.||+|.. +|+.||||++.. .....+.+|.++++. ++||||+++++++..
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~-------~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS-------REERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG-------GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc-------hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3445568999999999999999999987 589999999864 234567888998887 689999999999988
Q ss_pred CC----eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEccCCCCCeee
Q 039322 508 AR----HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH--------HDCFPPIVHQDISSKNLLL 575 (708)
Q Consensus 508 ~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh--------~~~~~~ivH~dlk~~Nill 575 (708)
++ ..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||++
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 180 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEE
Confidence 76 789999999999999999653 3899999999999999999999 77 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCc----cccccccccccCccccccCC------CCcchhHHHHHHHHHHHHhC-------
Q 039322 576 DLEYEAHVADFGIAKFLKPESSN----WTEFAGTYGYVAPELAYTMK------ITEKCDVYSFGVLVLEAIKG------- 638 (708)
Q Consensus 576 ~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~------~~~~~DvwslG~~l~elltg------- 638 (708)
+.++.+||+|||++......... .....|++.|+|||++.+.. ++.++||||||+++|||+||
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 99999999999999876544322 23457899999999987652 33689999999999999999
Q ss_pred ---CCCCCccccccccccccccccccccCCCCCCCC-c--hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 639 ---KHPRDFLSLISSSSLNTDIALDEILDPRLPPPS-R--SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 639 ---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..||....... .........+......+.. . ........+.+++.+||+.||++|||++||+++|+
T Consensus 261 ~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 261 EDYQLPYYDLVPSD---PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CCCCCTTTTTSCSS---CCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cccccCccccCcCc---ccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 66765321100 0001111112222221111 1 12345567899999999999999999999999985
No 170
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.8e-40 Score=337.96 Aligned_cols=246 Identities=21% Similarity=0.388 Sum_probs=198.5
Q ss_pred hccccccceeccccCccEEEEEeC-CC-------cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SG-------QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS 506 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~ 506 (708)
.++|.+.+.||+|+||.||+|... ++ +.||+|++.. ......+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK----AHRNYSESFFEAASMMSKLSHKHLVLNYGVCV 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECG----GGGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccc----ccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE
Confidence 378999999999999999999654 23 4799999865 23345678999999999999999999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc------
Q 039322 507 HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE------ 580 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~------ 580 (708)
.++..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 83 CGDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp CTTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred eCCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 9999999999999999999997543 3489999999999999999999999 9999999999999998887
Q ss_pred --EEEeecccccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCC-CCccccccccccccc
Q 039322 581 --AHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHP-RDFLSLISSSSLNTD 656 (708)
Q Consensus 581 --~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p-~~~~~~~~~~~~~~~ 656 (708)
+||+|||++..... .....+++.|+|||.+.+ ..++.++||||||+++|||++|..| |......
T Consensus 158 ~~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-------- 225 (289)
T 4fvq_A 158 PFIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-------- 225 (289)
T ss_dssp CEEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------
T ss_pred ceeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH--------
Confidence 99999999975432 234567899999999887 6789999999999999999996554 4321110
Q ss_pred ccccccc-CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 IALDEIL-DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....... ....+... ...+.+++.+||+.||++|||++|++++|+
T Consensus 226 ~~~~~~~~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 226 RKLQFYEDRHQLPAPK------AAELANLINNCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp HHHHHHHTTCCCCCCS------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhhccCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 0000001 11111110 124778999999999999999999999985
No 171
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=7.5e-40 Score=339.35 Aligned_cols=257 Identities=23% Similarity=0.350 Sum_probs=202.6
Q ss_pred ccccceeccccCccEEEEEeC-----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC--Ce
Q 039322 438 FDAQYCIGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--RH 510 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~ 510 (708)
|++.+.||+|+||.||++.+. +++.||||+++... .....+.+.+|++++++++||||+++++++.+. ..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 499999999999999988542 68899999998642 234567899999999999999999999999874 67
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++|+|.+++.... +++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 899999999999999996543 89999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccc------ccccccccccc
Q 039322 591 FLKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS------SSLNTDIALDE 661 (708)
Q Consensus 591 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~------~~~~~~~~~~~ 661 (708)
........ .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||........ ...........
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 77544322 2344578889999999998899999999999999999999999864221100 00000000111
Q ss_pred cc-CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 IL-DPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .....+... ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 263 ~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 263 LLERGERLPRPD---KCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcccCCCCCc---cccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11 111111111 12345889999999999999999999999875
No 172
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=5e-40 Score=342.32 Aligned_cols=260 Identities=23% Similarity=0.329 Sum_probs=206.1
Q ss_pred ccccccceeccccCccEEEEEe-----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe--eC
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS--HA 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~ 508 (708)
++|++.+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|++++++++||||+++++++. +.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 7899999999999999999973 46889999998763 3345677999999999999999999999986 45
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 67899999999999999997543 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc------ccc-cccc
Q 039322 589 AKFLKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS------SLN-TDIA 658 (708)
Q Consensus 589 a~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~------~~~-~~~~ 658 (708)
+......... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||......... ... ....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 9876544322 23345788899999999888999999999999999999999998643211000 000 0011
Q ss_pred cccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..........+... ..+..+.+++.+||+.||++|||++|++++|+
T Consensus 254 ~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 254 LELLEEGQRLPAPP---ACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcccCCCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111111111 12345889999999999999999999999885
No 173
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5.7e-40 Score=342.38 Aligned_cols=265 Identities=23% Similarity=0.359 Sum_probs=201.7
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+.+|++++++++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC--CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 478999999999999999999764 58999999986532 223445678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.++..... .+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++....
T Consensus 102 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 999999999998865433 489999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc----------------ccc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL----------------NTD 656 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~----------------~~~ 656 (708)
..........+++.|+|||++.+. .++.++||||+|+++|+|++|+.||........... ...
T Consensus 176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence 554455566789999999998775 688999999999999999999999975332110000 000
Q ss_pred cccccccCCCCCCCCc---hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 IALDEILDPRLPPPSR---SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+....... .....+..+.+++.+||+.||++|||++|+++|-+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 309 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 0001111111111100 01122356889999999999999999999998744
No 174
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.9e-40 Score=355.07 Aligned_cols=262 Identities=22% Similarity=0.306 Sum_probs=198.5
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA----- 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 508 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+++++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 47899999999999999999964 468999999997532 2334567889999999999999999999999654
Q ss_pred -CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 509 -RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 509 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
...|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 357999999986 56666632 388999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc--------------
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-------------- 653 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-------------- 653 (708)
+|+..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...........
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 210 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp CC-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred eeeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99876533 234556899999999999999999999999999999999999999975321100000
Q ss_pred ccccccccccCCC----------------CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 654 NTDIALDEILDPR----------------LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 654 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
........+.... .+............+.+|+.+||+.||++|||++|+++|-++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~ 359 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhh
Confidence 0000000011100 111111122235568899999999999999999999998653
No 175
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.5e-40 Score=371.92 Aligned_cols=345 Identities=20% Similarity=0.240 Sum_probs=305.2
Q ss_pred CCCCcEEECCCCccccc-----------------CCcccc--CCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCC
Q 039322 1 MRSLSILDLNQNQFKGV-----------------LPPSVS--NLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNH 60 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~-----------------~~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~ 60 (708)
|++|++|+|++|++++. .|..+. ++++|++|+|++|.+.+.+|..+.. ++|+.|++++|.
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 57899999999999985 888888 9999999999999999999988876 899999999998
Q ss_pred -ccC-CCCccccCC------CCccEEeccCCccccccCc--cCcCCCCCcEEEccCCccccccccccCCCCCCCEEEccc
Q 039322 61 -FTS-YLPHNVCRG------GALQYFGVSENHFQGTIPK--ILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSR 130 (708)
Q Consensus 61 -~~~-~~~~~~~~l------~~L~~L~l~~n~i~~~~~~--~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~ 130 (708)
+++ .+|..++.+ ++|++|++++|+++ .+|. .++++++|++|++++|++++..+ .|..+++|++|++++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 887 788888876 99999999999999 7888 89999999999999999996666 899999999999999
Q ss_pred CcceeeCCCCCCCCCC-CCEEEcccCcccccCCccccCCC--CCCEEecccccccccCCcccC-------CCCCCCEEEc
Q 039322 131 NDFYGEISSNWGKCPK-LGTLNVSMNNITGGIPREIGNSS--QLQALDLSLNHIVGEIPKELG-------KLNSLTELIL 200 (708)
Q Consensus 131 n~l~~~~~~~~~~l~~-L~~L~L~~N~i~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~~~~-------~l~~L~~L~l 200 (708)
|+++ ..+..+..+++ |+.|++++|.++ .+|..+..++ +|++|++++|++++..|..+. .+++|++|+|
T Consensus 363 N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~L 440 (636)
T 4eco_A 363 NQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440 (636)
T ss_dssp SEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEEC
T ss_pred Cccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEEC
Confidence 9999 55667999999 999999999999 6777887765 899999999999998888888 7889999999
Q ss_pred cCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCcc-------ccceeecccCcccccCCChhhh--hhcccchhh
Q 039322 201 RGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNL-------LKLHYLGLSNNQFVLELPKELE--KLVQLSELD 271 (708)
Q Consensus 201 ~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l-------~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~ 271 (708)
++|+++...+..+..+++|++|+|++|+++...+..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+
T Consensus 441 s~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~ 519 (636)
T 4eco_A 441 SNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGID 519 (636)
T ss_dssp CSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEE
T ss_pred cCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEE
Confidence 9999995555556779999999999999994433444333 39999999999999 6777776 999999999
Q ss_pred cccccCCCCCchhhcCcccCCceec------ccccccCCCCCcccccccccEEecCCCcCCCCCCCccccccCccccccc
Q 039322 272 ASHNLFGGEIPFQICSLKSLEKLNL------SHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKG 345 (708)
Q Consensus 272 ls~N~i~~~~~~~~~~~~~L~~L~l------~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~ 345 (708)
|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|+.|++++|++. .+|.. ..+.++.+.+++
T Consensus 520 Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~-~~~~L~~L~Ls~ 596 (636)
T 4eco_A 520 LSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEK-ITPNISVLDIKD 596 (636)
T ss_dssp CCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSC-CCTTCCEEECCS
T ss_pred CCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHh-HhCcCCEEECcC
Confidence 99999996 7888999999999999 568888999999999999999999999995 44543 237899999999
Q ss_pred ccCcCCCC
Q 039322 346 NKGLCGGV 353 (708)
Q Consensus 346 n~~~c~~~ 353 (708)
|++.|-..
T Consensus 597 N~l~~~~~ 604 (636)
T 4eco_A 597 NPNISIDL 604 (636)
T ss_dssp CTTCEEEC
T ss_pred CCCccccH
Confidence 99988553
No 176
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-40 Score=347.67 Aligned_cols=268 Identities=23% Similarity=0.279 Sum_probs=200.2
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcch-hHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQ-IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
..++|++.+.||+|+||.||+|... +|+.||||++........ ......+.+|++++++++||||+++++++.+++..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3578999999999999999999764 589999999875322111 11124678999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||+++ +|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++..
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred EEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 999999986 8998886543 4578899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc--------c-----ccc
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL--------N-----TDI 657 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~--------~-----~~~ 657 (708)
............+|+.|+|||.+.+. .++.++||||+|+++|||++|..||........... . ...
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhc
Confidence 76555555567889999999998764 478899999999999999999999874321100000 0 000
Q ss_pred ccccccC-CCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILD-PRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~-~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....... ...+..+ .........+.+++.+||+.||++|||++|+++|-+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 0000000 0011000 000112346889999999999999999999999865
No 177
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=334.01 Aligned_cols=256 Identities=23% Similarity=0.312 Sum_probs=200.3
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|.....||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 97 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 97 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC----C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc----hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEE
Confidence 3455566899999999999965 568899999987532 23456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEeecccccccC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL-EYEAHVADFGIAKFLK 593 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~a~~~~ 593 (708)
|||+++++|.+++........+++..++.++.|++.||+|||++ |++||||||+||+++. ++.+||+|||++....
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 99999999999997654444578999999999999999999999 9999999999999987 8999999999998765
Q ss_pred CCCCccccccccccccCccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
..........|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.......... .........+.++.
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~-- 249 (295)
T 2clq_A 175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM---FKVGMFKVHPEIPE-- 249 (295)
T ss_dssp C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH---HHHHHHCCCCCCCT--
T ss_pred CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH---Hhhccccccccccc--
Confidence 4433344567899999999987643 7889999999999999999999986322110000 00000011111111
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+.+++.+||+.||++|||++|++++-+
T Consensus 250 ----~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~ 281 (295)
T 2clq_A 250 ----SMSAEAKAFILKCFEPDPDKRACANDLLVDEF 281 (295)
T ss_dssp ----TSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGG
T ss_pred ----cCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 12235788999999999999999999998744
No 178
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-39 Score=337.59 Aligned_cols=258 Identities=22% Similarity=0.360 Sum_probs=195.7
Q ss_pred HhccccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
..++|.+.+.||+|+||.||+|... .++.||+|.++.... .....+.+.+|++++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 4578999999999999999999653 345899999875322 2344677999999999999999999999997755
Q ss_pred -----eeEEEEEeccCCCHHHHhcccc---cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 039322 510 -----HSFLVYELLERGSLAAILSSDT---AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEA 581 (708)
Q Consensus 510 -----~~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 581 (708)
..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ |++||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 3599999999999999985332 234589999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccc
Q 039322 582 HVADFGIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIA 658 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 658 (708)
||+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||..... ...
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~ 258 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--------HEM 258 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--------GGH
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--------HHH
Confidence 9999999986644322 1233456789999999999899999999999999999999 8899874321 111
Q ss_pred cccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+.......... ..+..+.+++.+||+.||++|||+++++++|+
T Consensus 259 ~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 259 YDYLLHGHRLKQPE---DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp HHHHHTTCCCCCBT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHcCCCCCCCc---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11122221111111 12235889999999999999999999999885
No 179
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.3e-39 Score=363.36 Aligned_cols=331 Identities=20% Similarity=0.212 Sum_probs=284.9
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEe
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFG 79 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 79 (708)
+++|++|+|++|+|+++.+.+|.++++|++|+|++|.+++..|..+.. ++|+.|++++|.+.+..+..++.+++|++|+
T Consensus 55 l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 467888888888888888888888888888888888888777777765 7888888888888887777788888888888
Q ss_pred ccCCcccc-ccCccCcCCCCCcEEEccCCccccccccc------------------------------------------
Q 039322 80 VSENHFQG-TIPKILRNCSSLIRVRLNSNNLTGNISEA------------------------------------------ 116 (708)
Q Consensus 80 l~~n~i~~-~~~~~~~~l~~L~~L~l~~n~i~~~~~~~------------------------------------------ 116 (708)
+++|.+++ .+|..|+++++|++|++++|+++++.+..
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n 214 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGN 214 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCC
Confidence 88888875 45777888888888888887766443221
Q ss_pred --------------------------------------------------------------------------------
Q 039322 117 -------------------------------------------------------------------------------- 116 (708)
Q Consensus 117 -------------------------------------------------------------------------------- 116 (708)
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 294 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEES
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecC
Confidence
Q ss_pred ---------------------------------------------------cCCCCCCCEEEcccCcceeeC--CCCCCC
Q 039322 117 ---------------------------------------------------LGIYPNLTFIDLSRNDFYGEI--SSNWGK 143 (708)
Q Consensus 117 ---------------------------------------------------~~~~~~L~~L~l~~n~l~~~~--~~~~~~ 143 (708)
+..+++|++|++++|++++.. +..+..
T Consensus 295 ~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 374 (606)
T 3vq2_A 295 VSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLG 374 (606)
T ss_dssp CCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHC
T ss_pred ccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhcc
Confidence 123456777777778877663 667788
Q ss_pred CCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCC-cccCCCCCCCEEEccCccccccCCcccCCCCCCCeE
Q 039322 144 CPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIP-KELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYL 222 (708)
Q Consensus 144 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 222 (708)
+++|++|++++|.++. .+..|..+++|++|++++|++.+..+ ..+..+++|++|++++|.+++..|..+..+++|++|
T Consensus 375 ~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 453 (606)
T 3vq2_A 375 TNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL 453 (606)
T ss_dssp CSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEE
Confidence 9999999999999985 55889999999999999999997777 689999999999999999998899999999999999
Q ss_pred eccCCcccc-cCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccc
Q 039322 223 DLSANRFNN-SVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNL 301 (708)
Q Consensus 223 ~l~~N~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l 301 (708)
++++|++++ ..|..+..+++|+.|++++|++++..|..|.++++|+.|++++|++++..|..+..+++|+.|++++|++
T Consensus 454 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 533 (606)
T 3vq2_A 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 533 (606)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCC
T ss_pred ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcC
Confidence 999999997 4788899999999999999999999999999999999999999999988899999999999999999999
Q ss_pred cCCCCCcccccc-cccEEecCCCcCCCCCCCcc
Q 039322 302 SGSIPNCFEGIR-GISVIDISDNQLQGPVPNST 333 (708)
Q Consensus 302 ~~~~~~~~~~l~-~L~~l~l~~N~l~~~~~~~~ 333 (708)
+ .+|..+..++ +|+.|++++|++.|.++..+
T Consensus 534 ~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 534 E-TSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp C-CEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred c-ccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 9 6677788887 59999999999999877643
No 180
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.4e-40 Score=340.13 Aligned_cols=254 Identities=26% Similarity=0.396 Sum_probs=202.3
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..++|++.+.||+|+||.||+|... +|+.||+|.+.... ..+.+.+|++++++++||||+++++++..++..+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence 3478999999999999999999664 58999999987531 2456889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++...
T Consensus 101 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEEECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 9999999999999986322 4589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 593 KPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
...........+++.|+|||.+.+..++.++||||||+++|+|++|+.||......... ........+....
T Consensus 176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~--- 247 (314)
T 3com_A 176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-----FMIPTNPPPTFRK--- 247 (314)
T ss_dssp BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCSS---
T ss_pred hhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-----HHHhcCCCcccCC---
Confidence 55444445567899999999999888999999999999999999999998743221100 0000011111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.+++.+||+.||++|||+.+++++-+
T Consensus 248 -~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~ 281 (314)
T 3com_A 248 -PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281 (314)
T ss_dssp -GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHH
T ss_pred -cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence 1112345889999999999999999999998643
No 181
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.4e-39 Score=334.25 Aligned_cols=254 Identities=25% Similarity=0.370 Sum_probs=199.4
Q ss_pred hccccccceeccccCccEEEEEeCC----CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe-eCC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS-HAR 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~ 509 (708)
..+|++.+.||+|+||.||+|...+ +..||+|.+... ......+.+.+|++++++++||||+++++++. .++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 100 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC---CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC
Confidence 4678899999999999999997542 235899998753 23345678999999999999999999999864 456
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred ceEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccc
Confidence 7899999999999999996533 4579999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC
Q 039322 590 KFLKPESS----NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILD 664 (708)
Q Consensus 590 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 664 (708)
........ ......+++.|+|||.+.+..++.++||||+|+++|+|++ |..||..... .........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--------~~~~~~~~~ 247 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------FDITVYLLQ 247 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT--------TTHHHHHHT
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH--------HHHHHHHhc
Confidence 86643221 1233456789999999999999999999999999999999 5555543221 111111111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+... +..+.+++.+||+.||++|||++|+++.|+
T Consensus 248 ~~~~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 248 GRRLLQPEYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp TCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCccC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111111 235888999999999999999999999875
No 182
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8.7e-40 Score=340.47 Aligned_cols=256 Identities=25% Similarity=0.404 Sum_probs=201.9
Q ss_pred hccccccceeccccCccEEEEEe------CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
.++|++.+.||+|+||.||+|.. .+++.||||.+.... .......+.+|+.++++++||||+++++++..+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 47899999999999999999974 357789999997532 234456789999999999999999999999999
Q ss_pred CeeEEEEEeccCCCHHHHhccccc----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---CCcE
Q 039322 509 RHSFLVYELLERGSLAAILSSDTA----AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL---EYEA 581 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~ 581 (708)
+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ |++||||||+||+++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999976542 23489999999999999999999999 9999999999999984 4469
Q ss_pred EEeecccccccCCCCC--ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccc
Q 039322 582 HVADFGIAKFLKPESS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIA 658 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 658 (708)
||+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|+| |+.||..... ...
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~ 254 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEV 254 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHH
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--------HHH
Confidence 9999999975543322 2234567889999999998899999999999999999998 9999874321 111
Q ss_pred cccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 LDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+........... .+..+.+++.+||+.||++|||++|++++|+
T Consensus 255 ~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 255 LEFVTSGGRMDPPKN---CPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 111111111111111 2235888999999999999999999999986
No 183
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-41 Score=353.69 Aligned_cols=260 Identities=21% Similarity=0.292 Sum_probs=203.7
Q ss_pred hccccccceeccccCccEEEEEe----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHAR 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~ 509 (708)
.++|++.+.||+|+||.||+|.. .+++.||||+++...........+.+.+|+++++++ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 37899999999999999999976 378999999987532111122345577799999999 5999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
..++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999997543 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-ccccccccccccCccccccC--CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 039322 590 KFLKPESS-NWTEFAGTYGYVAPELAYTM--KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 590 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
+.+..... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ .......+....
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~----~~~~~~~~~~~~ 282 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS----QAEISRRILKSE 282 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC----HHHHHHHHHHCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch----HHHHHHHHhccC
Confidence 86543222 23345789999999998853 478899999999999999999999974321110 011111111111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhhC
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRP-----TMKVVTQQVRI 708 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~ 708 (708)
...+. .....+.+++.+||+.||++|| +++|++++.++
T Consensus 283 ~~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 283 PPYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp CCCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred CCCCc----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 11111 1223477899999999999999 99999998753
No 184
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.6e-40 Score=351.12 Aligned_cols=261 Identities=17% Similarity=0.251 Sum_probs=197.6
Q ss_pred hccccccceeccccCccEEEEEeCC------CcEEEEEEcCCCCCcchhHh--------HHHHHHHHHHHHhccCCceee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPS------GQVVAIKKFHSPLPCDQIAD--------QKEFLIEVKALTEIRHRNIVK 500 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~--------~~~~~~e~~~l~~l~h~~iv~ 500 (708)
.++|++.+.||+|+||.||+|.+.. ++.||||++...... ...+ ...+..|+..++.++||||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP-LFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHH-HHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchh-HHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 4689999999999999999997754 478999998763210 0001 123445666677888999999
Q ss_pred EEEEEeeC----CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 039322 501 FYGFCSHA----RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 501 l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 576 (708)
+++++... ...++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 99999765 4589999999 999999997642 4589999999999999999999999 999999999999999
Q ss_pred --CCCcEEEeecccccccCCCCCc-------cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 039322 577 --LEYEAHVADFGIAKFLKPESSN-------WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSL 647 (708)
Q Consensus 577 --~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~ 647 (708)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 8899999999999876433211 1334599999999999999999999999999999999999999974211
Q ss_pred cccc----ccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 648 ISSS----SLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 648 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.... ..........+.++.+... ..+..+.+++..||+.||++||+++++++.|+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 267 DPKYVRDSKIRYRENIASLMDKCFPAA-----NAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHSCTT-----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhHHHHHHHhcccc-----cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 1000 0000011111221111110 11235889999999999999999999998874
No 185
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.3e-39 Score=333.38 Aligned_cols=253 Identities=24% Similarity=0.363 Sum_probs=200.9
Q ss_pred hccccccc-eeccccCccEEEEEe---CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 435 TNDFDAQY-CIGNGGHGSVYRAEL---PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 435 ~~~~~~~~-~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
.++|.+.+ .||+|+||.||+|.. .+++.||||+++... ......+.+.+|++++++++||||+++++++ ..+.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc--cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 36788888 999999999999943 346789999997632 2223467899999999999999999999999 5677
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||||+++++|.+++.... .+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cEEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 899999999999999997543 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcc---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC
Q 039322 591 FLKPESSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 591 ~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
......... ....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...... .....+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~ 237 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGE 237 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTC
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCC
Confidence 765443321 22345688999999988889999999999999999999 99998743221 1111111111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+. ..+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 238 RMGCPA---GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 12335889999999999999999999999875
No 186
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=8.8e-40 Score=370.35 Aligned_cols=254 Identities=20% Similarity=0.298 Sum_probs=210.4
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCee
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~ 511 (708)
..++|++.+.||+|+||.||+|... +++.||||++++... ......+.+..|.+++..+ +||+|+++++++.+.+..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 4578999999999999999999654 688999999875210 1112345678899999887 699999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999999997543 489999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPS 671 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (708)
............||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+.......+.
T Consensus 492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~--------~~~~~~~i~~~~~~~p~ 563 (674)
T 3pfq_A 492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHNVAYPK 563 (674)
T ss_dssp CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHSSCCCCCT
T ss_pred cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhCCCCCCc
Confidence 5544455566789999999999999999999999999999999999999997422 22333344444433332
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHHh
Q 039322 672 RSVQEKLISIMEVAFSCLNESPESRPTM-----KVVTQQV 706 (708)
Q Consensus 672 ~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~l 706 (708)
. ...++.+++.+||++||++||++ +||++|-
T Consensus 564 ~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ 599 (674)
T 3pfq_A 564 S----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 599 (674)
T ss_dssp T----SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSG
T ss_pred c----CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCc
Confidence 2 22357889999999999999997 8888764
No 187
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.9e-40 Score=340.45 Aligned_cols=259 Identities=23% Similarity=0.286 Sum_probs=199.6
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCc----chhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPC----DQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
..++|++.+.||+|+||.||+|.. .+++.||||++...... ........+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 347899999999999999999965 46889999998753211 1112234688999999999999999999998766
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc---EEEee
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVAD 585 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~kl~D 585 (708)
+ .++||||+++|+|.+++... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 89999999999999998654 3489999999999999999999999 9999999999999987664 99999
Q ss_pred cccccccCCCCCccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
||++...... .......|++.|+|||++. ...++.++||||||+++|+|++|+.||...... ......+
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~ 232 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-------VSLKDQI 232 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-------SCHHHHH
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-------HHHHHHH
Confidence 9999876432 2234456899999999874 456889999999999999999999998732211 0111111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 663 LDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+......+..+.+++.+||+.||++|||++|+++|-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~ 277 (322)
T 2ycf_A 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277 (322)
T ss_dssp HHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred HhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcC
Confidence 112221111112223456889999999999999999999998754
No 188
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=340.61 Aligned_cols=252 Identities=23% Similarity=0.375 Sum_probs=195.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcE----EEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQV----VAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 510 (708)
++|++.+.||+|+||.||+|.+. +++. ||+|.+.... .....+.+.+|++++++++||||+++++++..+.
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS---SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 68999999999999999999753 4443 5778776432 2234678899999999999999999999998765
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++|+||+.+|+|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 789999999999999997543 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 039322 591 FLKPESSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 591 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||+..... .....+.....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~~~ 237 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--------EISSILEKGER 237 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHHHHTTCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------HHHHHHHcCCC
Confidence 76543322 233456789999999999999999999999999999999 99999743221 11111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+.... ....+.+++.+||+.||++|||++|+++.|+
T Consensus 238 ~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 238 LPQPPI---CTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCCCTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCcc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111111 2235888999999999999999999999874
No 189
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.7e-39 Score=333.83 Aligned_cols=258 Identities=22% Similarity=0.313 Sum_probs=207.6
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCc-----chhHhHHHHHHHHHHHHhcc-CCceeeEEEEEee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPC-----DQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSH 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~ 507 (708)
.++|++.+.||+|+||.||+|... +|+.||||++...... ......+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 478999999999999999999764 6899999998753211 11223567889999999996 9999999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
++..++||||+++++|.+++... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999753 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCccccc------cCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAY------TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDE 661 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 661 (708)
++....... ......+++.|+|||++. ...++.++||||||+++|+|++|+.||..... ......
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~ 240 (298)
T 1phk_A 170 FSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--------MLMLRM 240 (298)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred chhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--------HHHHHH
Confidence 998765432 334567899999999875 45678899999999999999999999864321 111111
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+...............+..+.+++.+||+.||++|||++|+++|-+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 286 (298)
T 1phk_A 241 IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 286 (298)
T ss_dssp HHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred HhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChH
Confidence 2222222211122233446889999999999999999999998754
No 190
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=345.30 Aligned_cols=261 Identities=20% Similarity=0.218 Sum_probs=195.3
Q ss_pred ccccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhH-------hHHHHHHHHHHHHhccCCceeeEEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIA-------DQKEFLIEVKALTEIRHRNIVKFYGF 504 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~-------~~~~~~~e~~~l~~l~h~~iv~l~~~ 504 (708)
++|++.+.||+|+||.||+|... ++..||+|++.........+ ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 68999999999999999999765 57889999987642211000 12346778889999999999999999
Q ss_pred Eee----CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-
Q 039322 505 CSH----ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY- 579 (708)
Q Consensus 505 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~- 579 (708)
+.. .+..++||||+ +++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSST
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCC
Confidence 987 67899999999 899999997554 589999999999999999999999 999999999999998887
Q ss_pred -cEEEeecccccccCCCCC-------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc
Q 039322 580 -EAHVADFGIAKFLKPESS-------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS 651 (708)
Q Consensus 580 -~~kl~Dfg~a~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~ 651 (708)
.+||+|||+++.+..... ......|++.|+|||++.+..++.++||||||+++|||++|+.||.........
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 999999999987643221 124457899999999999988999999999999999999999999632110000
Q ss_pred ccccccccccccCCCCCCCCch---hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 652 SLNTDIALDEILDPRLPPPSRS---VQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
............+..... ....+..+.+++.+||+.||++|||+++|++.|+
T Consensus 270 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 270 ----VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp ----HHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred ----HHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 000000000001000000 0012236889999999999999999999999885
No 191
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.3e-39 Score=342.71 Aligned_cols=265 Identities=22% Similarity=0.278 Sum_probs=200.8
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee------
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH------ 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------ 507 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... ......+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS--SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc--ccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 37899999999999999999976 57899999998764322 2234567899999999999999999999977
Q ss_pred --CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEee
Q 039322 508 --ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVAD 585 (708)
Q Consensus 508 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 585 (708)
.+..++||||+++ ++.+.+.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred cCCceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEcc
Confidence 3468999999986 7777775443 3489999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCC----CccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccc---------
Q 039322 586 FGIAKFLKPES----SNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS--------- 651 (708)
Q Consensus 586 fg~a~~~~~~~----~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~--------- 651 (708)
||+++.+.... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||.........
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~ 247 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 247 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 99998764321 22345678999999998876 45799999999999999999999999743211000
Q ss_pred ---cc-ccccccccccCCCC-CCCCchhHHH------HHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 652 ---SL-NTDIALDEILDPRL-PPPSRSVQEK------LISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 652 ---~~-~~~~~~~~~~~~~~-~~~~~~~~~~------~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .............. .......... ...+.+++.+||+.||++|||++|+++|-+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 314 (351)
T 3mi9_A 248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314 (351)
T ss_dssp CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence 00 00000000000000 0000011111 235789999999999999999999999855
No 192
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.4e-40 Score=332.45 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=196.5
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|.+.+.||+|+||.||+|... +|+.||||++.... .......+.+.+|+++++.++||||+++++++..++..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK-IRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc-ccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 378999999999999999999765 78999999986411 0111235678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.+++.... .+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++....
T Consensus 89 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999996543 489999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.. .......+++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+..... .....+.......+..
T Consensus 163 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 233 (276)
T 2h6d_A 163 DG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--------TLFKKIRGGVFYIPEY 233 (276)
T ss_dssp C--------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTT
T ss_pred CC-cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--------HHHHHhhcCcccCchh
Confidence 33 22344578999999999887665 57999999999999999999998742211 1111111111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+.+++.+||+.||++|||++|+++|-+
T Consensus 234 ----~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~ 264 (276)
T 2h6d_A 234 ----LNRSVATLLMHMLQVDPLKRATIKDIREHEW 264 (276)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred ----cCHHHHHHHHHHccCChhhCCCHHHHHhChh
Confidence 1235788999999999999999999998743
No 193
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-39 Score=331.45 Aligned_cols=253 Identities=24% Similarity=0.335 Sum_probs=199.5
Q ss_pred ccccccceeccccCccEEEEEeC-C---CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-S---GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
..|...+.||+|+||.||+|... + +..||+|.+... ......+.+.+|++++++++||||+++++++..++..
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI---TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGL 97 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc---ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCC
Confidence 35667789999999999999643 2 237999998753 2334567899999999999999999999999876655
Q ss_pred -EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 512 -FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 512 -~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
++||||+.+|+|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||+++
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 172 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLAR 172 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSC
T ss_pred cEEEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcc
Confidence 99999999999999997633 4579999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC----CccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCC-CccccccccccccccccccccCC
Q 039322 591 FLKPES----SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPR-DFLSLISSSSLNTDIALDEILDP 665 (708)
Q Consensus 591 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~-~~~~~~~~~~~~~~~~~~~~~~~ 665 (708)
...... .......+++.|+|||.+.+..++.++||||+|+++|+|++|..|+ ..... ......+...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--------~~~~~~~~~~ 244 (298)
T 3pls_A 173 DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--------FDLTHFLAQG 244 (298)
T ss_dssp TTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--------GGHHHHHHTT
T ss_pred cccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--------HHHHHHhhcC
Confidence 654321 1223456788999999999999999999999999999999966664 32111 1111111111
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+.... .+..+.+++.+||+.||++|||++++++.|+
T Consensus 245 ~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 245 RRLPQPEY---CPDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp CCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCcc---chHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111111 1235889999999999999999999999875
No 194
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.1e-39 Score=331.63 Aligned_cols=248 Identities=26% Similarity=0.399 Sum_probs=195.2
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-CeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA-RHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-~~~~l 513 (708)
.++|++.+.||+|+||.||+|... |+.||||.++.. ...+.+.+|++++++++||||+++++++... +..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC------C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch------hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 478999999999999999999874 889999998753 2356789999999999999999999997654 47899
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EECCCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEecCCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 9999999999999975432 2378999999999999999999999 99999999999999999999999999997554
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSR 672 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (708)
.. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+..........
T Consensus 169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~ 237 (278)
T 1byg_A 169 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPRVEKGYKMDAPD 237 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--------GGHHHHHTTTCCCCCCT
T ss_pred cc---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCCCCCcc
Confidence 32 223457889999999998899999999999999999998 9999874321 11111111111111111
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 673 SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 673 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 238 ---GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 12345889999999999999999999999875
No 195
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=8e-40 Score=346.80 Aligned_cols=259 Identities=10% Similarity=0.008 Sum_probs=185.4
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc--cCCceeeEE-------EEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI--RHRNIVKFY-------GFC 505 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~~iv~l~-------~~~ 505 (708)
.+|.+.+.||+|+||.||+|.+ .+|+.||||++..... ......+.+.+|+++++.+ +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAE-NSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCST-THHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccc-ccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 5699999999999999999975 4789999999987432 2334566788886655555 599988866 444
Q ss_pred eeC-----------------CeeEEEEEeccCCCHHHHhcccccccCCCHHHH------HHHHHHHHHHHHHHHhCCCCC
Q 039322 506 SHA-----------------RHSFLVYELLERGSLAAILSSDTAAQELGWSQR------MNVIKGVADALSYLHHDCFPP 562 (708)
Q Consensus 506 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~------~~i~~~i~~~l~~Lh~~~~~~ 562 (708)
..+ ...++||||++ |+|.+++.... ..+.+..+ ..++.|++.||+|||++ |
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 332 33799999999 89999997643 22455555 78889999999999999 9
Q ss_pred eEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccCcccccc--CCCCcchhHHHHHHHHHHHHhCCC
Q 039322 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKH 640 (708)
Q Consensus 563 ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~ 640 (708)
|+||||||+|||++.++.+||+|||+|+.... ......+++.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999986542 2224566799999999987 678999999999999999999999
Q ss_pred CCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 641 PRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 641 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
||............ ..............+ .....+..+.+++.+||+.||++|||++|+++|-+
T Consensus 292 Pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 355 (371)
T 3q60_A 292 PFGLVTPGIKGSWK-RPSLRVPGTDSLAFG--SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPE 355 (371)
T ss_dssp STTBCCTTCTTCCC-BCCTTSCCCCSCCCT--TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHH
T ss_pred CCCCcCcccccchh-hhhhhhccccccchh--hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHH
Confidence 99754221111100 000001111111111 01122345889999999999999999999998754
No 196
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.4e-39 Score=338.94 Aligned_cols=254 Identities=25% Similarity=0.383 Sum_probs=200.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcE--EEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQV--VAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~ 511 (708)
++|++.+.||+|+||.||+|... ++.. ||+|.+.... .....+.+.+|+++++++ +||||+++++++.+++..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 78999999999999999999654 5654 4999987532 223456789999999999 899999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccc-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC
Q 039322 512 FLVYELLERGSLAAILSSDT-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE 578 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 578 (708)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ ||+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999997653 224589999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 039322 579 YEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDI 657 (708)
Q Consensus 579 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~ 657 (708)
+.+||+|||++...... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~ 249 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------E 249 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------H
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--------H
Confidence 99999999999743321 12233456789999999988889999999999999999998 99999743221 1
Q ss_pred ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+........+. ..+..+.+++.+||+.||++|||++|++++|+
T Consensus 250 ~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 250 LYEKLPQGYRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HHHHGGGTCCCCCCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111111111111111 12235889999999999999999999999875
No 197
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.4e-40 Score=339.63 Aligned_cols=255 Identities=24% Similarity=0.386 Sum_probs=199.3
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++..++..++
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 93 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI 93 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC----CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence 478999999999999999999765 5889999998753 22346788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++....
T Consensus 94 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EEECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999986532 4489999999999999999999999 99999999999999999999999999976432
Q ss_pred CCCCccccccccccccCcccc-----ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 594 PESSNWTEFAGTYGYVAPELA-----YTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
..........|++.|+|||.+ .+..++.++||||||+++|+|++|+.||....... ..........+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~ 240 (302)
T 2j7t_A 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--------VLLKIAKSDPP 240 (302)
T ss_dssp HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHSCCC
T ss_pred ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH--------HHHHHhccCCc
Confidence 211122345689999999987 35678899999999999999999999987432211 01111111110
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. .......+..+.+++.+||+.||++|||++|+++|-+
T Consensus 241 ~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 278 (302)
T 2j7t_A 241 T-LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278 (302)
T ss_dssp C-CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTT
T ss_pred c-cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChH
Confidence 0 0011122345889999999999999999999998754
No 198
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.4e-39 Score=331.13 Aligned_cols=252 Identities=21% Similarity=0.319 Sum_probs=200.4
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee----CCe
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH----ARH 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----~~~ 510 (708)
..|.+.+.||+|+||.||+|.. .+++.||+|.+.... ......+.+.+|++++++++||||+++++++.. ...
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK--LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchh--hCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence 4578888999999999999965 468899999987522 123456789999999999999999999999865 356
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEccCCCCCeeeC-CCCcEEEeecc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP--IVHQDISSKNLLLD-LEYEAHVADFG 587 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfg 587 (708)
.++||||+++|+|.+++... ..+++..++.++.|++.||+|||+. + ++||||||+||+++ .++.+||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 89999999999999999654 3489999999999999999999998 7 99999999999998 78999999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
++..... .......|++.|+|||.+. +.++.++||||+|+++|+|++|+.||...... ............
T Consensus 178 ~~~~~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (290)
T 1t4h_A 178 LATLKRA--SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSGVK 247 (290)
T ss_dssp GGGGCCT--TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTTCC
T ss_pred Ccccccc--cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-------HHHHHHHhccCC
Confidence 9975433 2334557899999999876 45899999999999999999999998742211 111111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+. .........+.+++.+||+.||++|||++|+++|-+
T Consensus 248 ~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 285 (290)
T 1t4h_A 248 PA--SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp CG--GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred cc--ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcc
Confidence 11 111111235889999999999999999999999865
No 199
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=344.32 Aligned_cols=258 Identities=24% Similarity=0.386 Sum_probs=197.9
Q ss_pred HHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEee-
Q 039322 431 IVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSH- 507 (708)
Q Consensus 431 ~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~- 507 (708)
+....++|++.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 334568899999999999999999976 578999999987532 2346788999999999 79999999999977
Q ss_pred -----CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEE
Q 039322 508 -----ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAH 582 (708)
Q Consensus 508 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 582 (708)
.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ |++||||||+||+++.++.+|
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence 467899999999999999997653 24589999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCccccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccc
Q 039322 583 VADFGIAKFLKPESSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDI 657 (708)
Q Consensus 583 l~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~ 657 (708)
|+|||++..............|++.|+|||++. +..++.++||||||+++|+|++|+.||..........
T Consensus 170 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----- 244 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----- 244 (326)
T ss_dssp ECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----
T ss_pred EeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH-----
Confidence 999999987654433344567899999999986 5668899999999999999999999986432211000
Q ss_pred ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.... . ..+..+.+++.+||+.||++|||++|+++|-+
T Consensus 245 ~~~~~~~~~~~~--~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~ 289 (326)
T 2x7f_A 245 LIPRNPAPRLKS--K---KWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289 (326)
T ss_dssp HHHHSCCCCCSC--S---CSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHH
T ss_pred HhhcCccccCCc--c---ccCHHHHHHHHHHhccChhhCCCHHHHhhChH
Confidence 000000111111 1 11235889999999999999999999998743
No 200
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-39 Score=354.53 Aligned_cols=194 Identities=25% Similarity=0.387 Sum_probs=155.1
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----C
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA-----R 509 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-----~ 509 (708)
++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|++++++++||||+++++++... +
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 6899999999999999999965 478999999987532 2345567899999999999999999999999543 5
Q ss_pred eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccc
Q 039322 510 HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIA 589 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 589 (708)
..|+||||+. |+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 6899999984 6999998654 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---------------------------ccccccccccccCcccc-ccCCCCcchhHHHHHHHHHHHHhC
Q 039322 590 KFLKPESS---------------------------NWTEFAGTYGYVAPELA-YTMKITEKCDVYSFGVLVLEAIKG 638 (708)
Q Consensus 590 ~~~~~~~~---------------------------~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~elltg 638 (708)
+....... .....+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 87643211 22345789999999976 456699999999999999999994
No 201
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.2e-40 Score=364.54 Aligned_cols=252 Identities=26% Similarity=0.442 Sum_probs=205.2
Q ss_pred HhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
..++|++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++|+||+++++++.+ +..++
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 347899999999999999999998888889999998632 235679999999999999999999999876 67899
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 339 v~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred eeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 999999999999997532 24589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCC-ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCC
Q 039322 594 PESS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDP-RLPPP 670 (708)
Q Consensus 594 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 670 (708)
.... ......++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... +.+.+
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~~~~ 486 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYRMPCP 486 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--------HHHHHHHHTTCCCCCC
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCC
Confidence 3211 1122346788999999998899999999999999999999 9999874321 1111111111 11111
Q ss_pred CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 671 SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 671 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ....+.+++.+||+.||++|||+++|++.|+
T Consensus 487 -~~---~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 519 (535)
T 2h8h_A 487 -PE---CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519 (535)
T ss_dssp -TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -CC---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11 2335888999999999999999999999875
No 202
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=341.24 Aligned_cols=247 Identities=18% Similarity=0.198 Sum_probs=197.8
Q ss_pred HhccccccceeccccCccEEEEE------eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc---CCceeeEEEE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR---HRNIVKFYGF 504 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~l~~~ 504 (708)
..++|.+.+.||+|+||.||+|. ..+++.||||+++.. ...++..|+++++.++ |+||++++++
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~ 135 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSA 135 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence 34789999999999999999993 456889999999753 2446777788877776 9999999999
Q ss_pred EeeCCeeEEEEEeccCCCHHHHhcccc--cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-----
Q 039322 505 CSHARHSFLVYELLERGSLAAILSSDT--AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL----- 577 (708)
Q Consensus 505 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~----- 577 (708)
+..++..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ ||+||||||+|||++.
T Consensus 136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~ 212 (365)
T 3e7e_A 136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQ 212 (365)
T ss_dssp EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC
T ss_pred eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCc
Confidence 999999999999999999999997532 234589999999999999999999999 9999999999999998
Q ss_pred ------CCcEEEeecccccccC--CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 039322 578 ------EYEAHVADFGIAKFLK--PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLIS 649 (708)
Q Consensus 578 ------~~~~kl~Dfg~a~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~ 649 (708)
++.+||+|||+|+... ..........||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~- 291 (365)
T 3e7e_A 213 DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG- 291 (365)
T ss_dssp ------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-
T ss_pred cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-
Confidence 8999999999997543 2223345567999999999999999999999999999999999999998632210
Q ss_pred ccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHh
Q 039322 650 SSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESR-PTMKVVTQQV 706 (708)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~l 706 (708)
.... ...+.... . ...+.+++..|++.+|.+| |+++++.+.|
T Consensus 292 ------~~~~----~~~~~~~~--~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l 334 (365)
T 3e7e_A 292 ------ECKP----EGLFRRLP--H---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334 (365)
T ss_dssp ------EEEE----CSCCTTCS--S---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred ------ceee----chhccccC--c---HHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence 0111 11111111 1 2246678889999999998 5677766654
No 203
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.4e-39 Score=349.62 Aligned_cols=200 Identities=24% Similarity=0.387 Sum_probs=169.1
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA----- 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 508 (708)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|++++++++||||+++++++...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 37899999999999999999965 468899999997632 2344567899999999999999999999999776
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
+..|+||||+. |+|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 57899999986 5999999654 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC----------------------ccccccccccccCcccc-ccCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 039322 589 AKFLKPESS----------------------NWTEFAGTYGYVAPELA-YTMKITEKCDVYSFGVLVLEAIKGKHPRD 643 (708)
Q Consensus 589 a~~~~~~~~----------------------~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~elltg~~p~~ 643 (708)
|+....... ......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 987653321 13556789999999986 55669999999999999999999776654
No 204
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.3e-39 Score=334.29 Aligned_cols=257 Identities=18% Similarity=0.281 Sum_probs=197.2
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEE-eeCCee
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFC-SHARHS 511 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~-~~~~~~ 511 (708)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++.++|++++..++++ ..++..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc------cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 457899999999999999999975 578999999876532 223577899999999987766666555 667788
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee---CCCCcEEEeeccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL---DLEYEAHVADFGI 588 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~ 588 (708)
++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 9999999 899999997433 3589999999999999999999999 99999999999999 7889999999999
Q ss_pred ccccCCCCC-------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 039322 589 AKFLKPESS-------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDE 661 (708)
Q Consensus 589 a~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 661 (708)
+........ ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||......... .....
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~ 229 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-----QKYER 229 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-----SHHHH
T ss_pred ceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-----hhhhh
Confidence 987654332 123457899999999999999999999999999999999999999743321111 11111
Q ss_pred ccCCCCCCCC-chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ILDPRLPPPS-RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+.......+. ......+..+.+++.+||+.||++|||++++++.|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 230 ISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred hhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 1110000000 000111346889999999999999999999999875
No 205
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=340.93 Aligned_cols=261 Identities=24% Similarity=0.357 Sum_probs=195.0
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHH--HHhccCCceeeEEEEEee-----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKA--LTEIRHRNIVKFYGFCSH----- 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~--l~~l~h~~iv~l~~~~~~----- 507 (708)
.++|++.+.||+|+||.||+|.. +++.||||++... ....+..|.++ +..++||||+++++++..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-------NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-------chhhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 47899999999999999999977 6899999998641 23344445544 455899999999986542
Q ss_pred CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEEccCCCCCeeeCCCCcE
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC------FPPIVHQDISSKNLLLDLEYEA 581 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~------~~~ivH~dlk~~Nill~~~~~~ 581 (708)
....++||||+++|+|.+++.... .++..++.++.|++.||+|||+.. .++|+||||||+||+++.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 336789999999999999996544 588999999999999999999862 2389999999999999999999
Q ss_pred EEeecccccccCCCC--------CccccccccccccCcccccc-------CCCCcchhHHHHHHHHHHHHhCCCCCCccc
Q 039322 582 HVADFGIAKFLKPES--------SNWTEFAGTYGYVAPELAYT-------MKITEKCDVYSFGVLVLEAIKGKHPRDFLS 646 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslG~~l~elltg~~p~~~~~ 646 (708)
||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998764321 11234568999999999876 346678999999999999999987754221
Q ss_pred cccccccc---------ccc-----ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 647 LISSSSLN---------TDI-----ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 647 ~~~~~~~~---------~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........ ... .......+.++.........+..+.+++.+||+.||++|||++|+++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 11100000 000 00111122233222223345567999999999999999999999999875
No 206
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.1e-39 Score=335.47 Aligned_cols=265 Identities=23% Similarity=0.303 Sum_probs=203.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc--chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 67999999999999999999764 789999999875321 122346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+. |+|.+++..... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EECCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99998 599999975532 3488999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------cc---ccccc--
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------TD---IALDE-- 661 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------~~---~~~~~-- 661 (708)
.........+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||............ .. .....
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 156 PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCc
Confidence 444445567899999999988765 789999999999999999999999753321100000 00 00000
Q ss_pred ccCCCCCCCC-c----hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ILDPRLPPPS-R----SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~~~~~~~~~-~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+.++... . ........+.+++.+||+.||++|||++|+++|-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~ 286 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChh
Confidence 0000111000 0 00112346789999999999999999999998754
No 207
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=363.33 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=197.4
Q ss_pred cccccc-eeccccCccEEEEEeC---CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 437 DFDAQY-CIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 437 ~~~~~~-~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
++.+.. .||+|+||.||+|.+. ++..||||+++... .....+.+.+|++++++++||||+++++++.. +..+
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~ 411 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM 411 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeE
Confidence 344444 7999999999999653 46679999998642 22346789999999999999999999999976 5689
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+||||+++|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 412 lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 412 LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEEEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 9999999999999996543 4589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcc---ccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCC
Q 039322 593 KPESSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 593 ~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
....... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+......
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~~~~i~~~~~~ 558 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------PEVMAFIEQGKRM 558 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--------HHHHHHHHTTCCC
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--------HHHHHHHHcCCCC
Confidence 5433221 22345689999999999999999999999999999998 9999974322 1111222222111
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+. ..+..+.+++.+||+.||++||++++|++.|+
T Consensus 559 ~~p~---~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 559 ECPP---ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp CCCT---TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred CCCC---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1111 12345888999999999999999999998875
No 208
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.6e-40 Score=346.24 Aligned_cols=261 Identities=24% Similarity=0.340 Sum_probs=204.8
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|++++++++||||+++++++..++..++
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence 368999999999999999999664 68999999997642 23456789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ ||+||||||+||+++.++.+||+|||++....
T Consensus 109 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp EECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999996543 4899999999999999999999842 89999999999999999999999999997543
Q ss_pred CCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------------------
Q 039322 594 PESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN------------------- 654 (708)
Q Consensus 594 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~------------------- 654 (708)
.. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||............
T Consensus 184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 184 DS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp HH--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred cc--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 21 223457899999999999999999999999999999999999999743211000000
Q ss_pred ---------------cccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 ---------------TDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+.....+... .......+.+++.+||+.||++|||++|+++|-+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLP--SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCC--TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCC--cccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 00000000011100000 0112335889999999999999999999998865
No 209
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=343.85 Aligned_cols=260 Identities=22% Similarity=0.316 Sum_probs=195.9
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR---- 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~---- 509 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|++++++++||||+++++++..++
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 36899999999999999999965 579999999997543 23345677899999999999999999999997653
Q ss_pred --eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 510 --HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 510 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
..|+||||+ +++|.+++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 469999999 7899999865 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------ccccccc
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS-------LNTDIAL 659 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-------~~~~~~~ 659 (708)
+++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.......... .......
T Consensus 174 ~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 174 LARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp TCEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred ccccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9987543 2344578999999998877 678999999999999999999999997432210000 0000000
Q ss_pred c--------cccC--CCCCCC--CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 660 D--------EILD--PRLPPP--SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 660 ~--------~~~~--~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. .++. +..... ..........+.+++.+||+.||++|||++|+++|-+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~ 310 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChH
Confidence 0 0000 000000 0001112345788999999999999999999998754
No 210
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.6e-40 Score=351.14 Aligned_cols=248 Identities=15% Similarity=0.120 Sum_probs=192.0
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHH---HHHhccCCceeeEE-------E
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVK---ALTEIRHRNIVKFY-------G 503 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~---~l~~l~h~~iv~l~-------~ 503 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... ......+.+.+|++ ++++++||||++++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC--CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccc-cchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 47899999999999999999975 5699999999875321 12235678899994 55566899999998 6
Q ss_pred EEeeCC-----------------eeEEEEEeccCCCHHHHhccccc----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 039322 504 FCSHAR-----------------HSFLVYELLERGSLAAILSSDTA----AQELGWSQRMNVIKGVADALSYLHHDCFPP 562 (708)
Q Consensus 504 ~~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ 562 (708)
++..++ ..++||||+ +|+|.+++..... ...+++..++.++.|++.||+|||++ |
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 665543 278999999 6799999975432 11234588889999999999999999 9
Q ss_pred eEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccCccccccC-----------CCCcchhHHHHHHH
Q 039322 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM-----------KITEKCDVYSFGVL 631 (708)
Q Consensus 563 ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslG~~ 631 (708)
|+||||||+|||++.++.+||+|||+|+... .......| +.|+|||++.+. .++.++|||||||+
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999998533 23344567 999999999887 79999999999999
Q ss_pred HHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 632 VLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 632 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+|||++|+.||...... .....+.... . ..+..+.+++.+||+.||++|||+.|++++-+
T Consensus 303 l~elltg~~Pf~~~~~~--------~~~~~~~~~~-~-------~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 362 (377)
T 3byv_A 303 IYWIWCADLPITKDAAL--------GGSEWIFRSC-K-------NIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 362 (377)
T ss_dssp HHHHHHSSCCC--------------CCSGGGGSSC-C-------CCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHH
T ss_pred HHHHHHCCCCCcccccc--------cchhhhhhhc-c-------CCCHHHHHHHHHHcCCCchhCCCHHHHhhChH
Confidence 99999999999743211 1111111111 0 11235788999999999999999999998643
No 211
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.1e-39 Score=332.79 Aligned_cols=256 Identities=18% Similarity=0.282 Sum_probs=200.1
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEE-eeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFC-SHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~-~~~~~~~ 512 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+++++.++|++++..++++ ..++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS------SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc------chhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 47899999999999999999975 679999999986532 123588899999999987766555554 6677889
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC---CCCcEEEeecccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD---LEYEAHVADFGIA 589 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~a 589 (708)
+||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++ .++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 999999 889999997433 4589999999999999999999999 999999999999994 7889999999999
Q ss_pred cccCCCCCc-------cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 039322 590 KFLKPESSN-------WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 590 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
......... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......... .....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~ 230 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-----QKYERI 230 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-----SHHHHH
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-----hhhhhh
Confidence 876544321 24457899999999999999999999999999999999999999743221111 111111
Q ss_pred cCCCCCCCC-chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 663 LDPRLPPPS-RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 663 ~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+. ......+..+.+++.+||+.||++|||++++++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 231 SEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 110000000 000112345889999999999999999999999875
No 212
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.4e-39 Score=364.38 Aligned_cols=342 Identities=21% Similarity=0.228 Sum_probs=240.0
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
++|++|+|++|+|+++.+..|.++++|++|+|++|++.+..|..+.. ++|+.|++++|.+.+..+..+..+++|++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 57999999999999999999999999999999999999988888876 89999999999999988888999999999999
Q ss_pred cCCccccc-cCccCcCCCCCcEEEccCCc-cccccccccCCCCCCCEEEcccCcceeeCCCCCCC---------------
Q 039322 81 SENHFQGT-IPKILRNCSSLIRVRLNSNN-LTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGK--------------- 143 (708)
Q Consensus 81 ~~n~i~~~-~~~~~~~l~~L~~L~l~~n~-i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~--------------- 143 (708)
++|.+++. .|..+.++++|++|++++|. ++.+.+..|..+++|++|++++|++++..+..+..
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 99999863 46789999999999999998 67777789999999999999999999888877765
Q ss_pred ---------CCCCCEEEcccCcccccC--C--------------------------------------------------
Q 039322 144 ---------CPKLGTLNVSMNNITGGI--P-------------------------------------------------- 162 (708)
Q Consensus 144 ---------l~~L~~L~L~~N~i~~~~--~-------------------------------------------------- 162 (708)
+++|++|++++|++++.. +
T Consensus 186 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~ 265 (549)
T 2z81_A 186 FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNG 265 (549)
T ss_dssp THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEEC
T ss_pred ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccc
Confidence 456666666666665421 0
Q ss_pred -------------------------------------------------------------ccc-cCCCCCCEEeccccc
Q 039322 163 -------------------------------------------------------------REI-GNSSQLQALDLSLNH 180 (708)
Q Consensus 163 -------------------------------------------------------------~~~-~~l~~L~~L~L~~n~ 180 (708)
..+ ..+++|++|+|++|+
T Consensus 266 ~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~ 345 (549)
T 2z81_A 266 LGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENL 345 (549)
T ss_dssp CSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSC
T ss_pred cccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCc
Confidence 000 123334444444444
Q ss_pred ccccCC---cccCCCCCCCEEEccCccccccCC--cccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCccccc
Q 039322 181 IVGEIP---KELGKLNSLTELILRGNQFTGRLP--PEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVL 255 (708)
Q Consensus 181 l~~~~~---~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 255 (708)
+++..+ ..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|+++ ..|..+..+++|+.|++++|+++.
T Consensus 346 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~ 424 (549)
T 2z81_A 346 MVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV 424 (549)
T ss_dssp CCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC
T ss_pred cccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc
Confidence 433221 113334444444444444432211 22344444444444444444 334444444444444444444442
Q ss_pred CCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCC-ccc
Q 039322 256 ELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN-STA 334 (708)
Q Consensus 256 ~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~ 334 (708)
.+..+. ++|+.|++++|++++. ...+++|++|++++|+++ .+|. ...+++|+.|++++|++++.+|. ...
T Consensus 425 -l~~~~~--~~L~~L~Ls~N~l~~~----~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 495 (549)
T 2z81_A 425 -VKTCIP--QTLEVLDVSNNNLDSF----SLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDR 495 (549)
T ss_dssp -CCTTSC--TTCSEEECCSSCCSCC----CCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGG
T ss_pred -ccchhc--CCceEEECCCCChhhh----cccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhc
Confidence 222111 2455555555555432 136788999999999988 4554 45788999999999999988776 467
Q ss_pred cccCcccccccccCcCCCC
Q 039322 335 FRNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 335 ~~~~~~~~~~~n~~~c~~~ 353 (708)
++.++.+.+.+|+|.|+|+
T Consensus 496 l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 496 LTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CTTCCEEECCSSCBCCCHH
T ss_pred CcccCEEEecCCCccCCCc
Confidence 7889999999999999875
No 213
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=360.51 Aligned_cols=351 Identities=21% Similarity=0.242 Sum_probs=292.5
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEe
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFG 79 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 79 (708)
+++|++|+|++|+|+.+.+..|+++++|++|+|++|.+++..+..|.. ++|+.|++++|.+.+..+..++.+++|++|+
T Consensus 51 l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 130 (570)
T 2z63_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (570)
T ss_dssp CSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEE
T ss_pred CCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEe
Confidence 578999999999999999999999999999999999999888888866 7899999999999887777788999999999
Q ss_pred ccCCccccc-cCccCcCCCCCcEEEccCCccccccccc------------------------------------------
Q 039322 80 VSENHFQGT-IPKILRNCSSLIRVRLNSNNLTGNISEA------------------------------------------ 116 (708)
Q Consensus 80 l~~n~i~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~------------------------------------------ 116 (708)
+++|.+++. +|..|+++++|++|++++|.++++.+..
T Consensus 131 L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n 210 (570)
T 2z63_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 210 (570)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccc
Confidence 999999863 5888999999999999988876543221
Q ss_pred -------------------------------------------------------------------cCCCCCCCEEEcc
Q 039322 117 -------------------------------------------------------------------LGIYPNLTFIDLS 129 (708)
Q Consensus 117 -------------------------------------------------------------------~~~~~~L~~L~l~ 129 (708)
|..+++|++|+++
T Consensus 211 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~ 290 (570)
T 2z63_A 211 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLV 290 (570)
T ss_dssp CSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEE
T ss_pred cccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEec
Confidence 2234566666666
Q ss_pred cCcceeeCCCC----------------------C-------------------CCCCCCCEEEcccCcccccC--Ccccc
Q 039322 130 RNDFYGEISSN----------------------W-------------------GKCPKLGTLNVSMNNITGGI--PREIG 166 (708)
Q Consensus 130 ~n~l~~~~~~~----------------------~-------------------~~l~~L~~L~L~~N~i~~~~--~~~~~ 166 (708)
+|.+..+.... + ..+++|+.|++++|.++... +..+.
T Consensus 291 ~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 370 (570)
T 2z63_A 291 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 370 (570)
T ss_dssp SCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHH
T ss_pred CccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCcccccccccc
Confidence 66665332110 0 45678888888888888554 67788
Q ss_pred CCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCC-cccCCCCCCCeEeccCCcccccCCCCCCcccccee
Q 039322 167 NSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLP-PEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHY 245 (708)
Q Consensus 167 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~ 245 (708)
.+++|++|++++|.+.+..+ .+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++..+..+..+++|+.
T Consensus 371 ~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 449 (570)
T 2z63_A 371 GTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449 (570)
T ss_dssp TCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred ccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcE
Confidence 99999999999999996544 49999999999999999997665 57899999999999999999889999999999999
Q ss_pred ecccCcccc-cCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCc
Q 039322 246 LGLSNNQFV-LELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQ 324 (708)
Q Consensus 246 L~l~~n~l~-~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~ 324 (708)
|++++|+++ +..|..|..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|+
T Consensus 450 L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 529 (570)
T 2z63_A 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNP 529 (570)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCc
Confidence 999999997 5688899999999999999999998889999999999999999999999988899999999999999999
Q ss_pred CCCCCCCcccc-ccC--cccccccccCcCCCC
Q 039322 325 LQGPVPNSTAF-RNA--PVEALKGNKGLCGGV 353 (708)
Q Consensus 325 l~~~~~~~~~~-~~~--~~~~~~~n~~~c~~~ 353 (708)
++|.+|....+ ..+ ....+.+.+ .|..+
T Consensus 530 ~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 530 WDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp BCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred ccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 99998875433 111 112344444 66554
No 214
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.3e-39 Score=330.33 Aligned_cols=245 Identities=22% Similarity=0.376 Sum_probs=202.3
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee-----
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH----- 507 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----- 507 (708)
...+|++.+.||+|+||.||+|... +++.||+|.+.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 3478999999999999999999765 79999999987531 346689999999999999999998864
Q ss_pred -----------CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 039322 508 -----------ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 508 -----------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 576 (708)
....++||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ |++||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 445899999999999999997543 24589999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccc
Q 039322 577 LEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD 656 (708)
Q Consensus 577 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~ 656 (708)
.++.+||+|||++....... ......+++.|+|||.+.+..++.++||||||+++|||++|..|+.....
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--------- 226 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK--------- 226 (284)
T ss_dssp ETTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH---------
T ss_pred CCCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH---------
Confidence 99999999999998765433 23445789999999999988899999999999999999999998642111
Q ss_pred cccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 IALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..........+.. .+..+.+++.+||+.||++|||+.|++++|+
T Consensus 227 -~~~~~~~~~~~~~------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 227 -FFTDLRDGIISDI------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp -HHHHHHTTCCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -HHHHhhccccccc------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111112222111 1234778999999999999999999999986
No 215
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=333.16 Aligned_cols=256 Identities=20% Similarity=0.266 Sum_probs=199.6
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe--eCCee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS--HARHS 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~~ 511 (708)
.++|++.+.||+|+||.||+|.. .+++.||+|++............+.+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999976 4688999999875211111234577999999999999999999999984 45678
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++||||++++ +.+++.... ...+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999886 777776543 34589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CccccccccccccCccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 592 LKPES--SNWTEFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 592 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
..... .......|++.|+|||++.+.. .+.++||||||+++|||++|+.||+.... ......+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~~~~~ 230 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--------YKLFENIGKGSY 230 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--------HHHHHHHhcCCC
Confidence 65322 2234456899999999987644 37799999999999999999999974321 111111111121
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.. ....+.+++.+||+.||++|||++|++++-+
T Consensus 231 ~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 266 (305)
T 2wtk_C 231 AIPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSW 266 (305)
T ss_dssp CCCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHHSHH
T ss_pred CCCCc----cCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence 11111 1235788999999999999999999998754
No 216
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=349.77 Aligned_cols=324 Identities=19% Similarity=0.165 Sum_probs=299.3
Q ss_pred CCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCC
Q 039322 28 LKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSN 107 (708)
Q Consensus 28 L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n 107 (708)
-+.++.+++.++ .+|..+. ++++.|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~-~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP-TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC-TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcC-cCCCCCC-CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 467889999987 4555443 58999999999999988999999999999999999999988999999999999999999
Q ss_pred ccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCc
Q 039322 108 NLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPK 187 (708)
Q Consensus 108 ~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 187 (708)
+++.+++..|.++++|++|+|++|++..+.+..|..+++|+.|+|++|.++...+..|..+++|++|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999977677
Q ss_pred ccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhccc
Q 039322 188 ELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQL 267 (708)
Q Consensus 188 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 267 (708)
.+..+++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+..+.......+|+.|++++|+++...+..|..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 89999999999999999998888899999999999999998877777777777799999999999997666789999999
Q ss_pred chhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCCc-cccccCcccccccc
Q 039322 268 SELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNS-TAFRNAPVEALKGN 346 (708)
Q Consensus 268 ~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n 346 (708)
+.|+|++|.+++..+..+..+++|+.|+|++|++++..+..|..+++|+.|++++|.+++..+.. ..++.++.+.+.+|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 99999999999888888999999999999999999999999999999999999999999877653 45788999999999
Q ss_pred cCcCCCC
Q 039322 347 KGLCGGV 353 (708)
Q Consensus 347 ~~~c~~~ 353 (708)
||.|+|.
T Consensus 331 ~l~c~c~ 337 (477)
T 2id5_A 331 PLACDCR 337 (477)
T ss_dssp CEECSGG
T ss_pred CccCccc
Confidence 9999884
No 217
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.5e-39 Score=359.84 Aligned_cols=341 Identities=20% Similarity=0.168 Sum_probs=234.5
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|.. ++|+.|++++|.++. +|.. .+++|++|++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc--ccccCCEEEC
Confidence 35666666666666666666666666666666666666666665544 566666666666664 3333 5666666666
Q ss_pred cCCccccc-cCccCcCCCCCcEEEccCCccccccccccCCCCCC--CEEEcccCcc--eeeCCCCCCCCC----------
Q 039322 81 SENHFQGT-IPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNL--TFIDLSRNDF--YGEISSNWGKCP---------- 145 (708)
Q Consensus 81 ~~n~i~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L--~~L~l~~n~l--~~~~~~~~~~l~---------- 145 (708)
++|.+++. .|..|+++++|++|+|++|.+++. .+..+++| ++|++++|++ ++..+..+..+.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 66666642 245666666666666666666643 23333333 6666666666 444433333221
Q ss_pred -----------------------------------------------------------------------CCCEEEccc
Q 039322 146 -----------------------------------------------------------------------KLGTLNVSM 154 (708)
Q Consensus 146 -----------------------------------------------------------------------~L~~L~L~~ 154 (708)
+|++|++++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 285 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEec
Confidence 344444444
Q ss_pred CcccccCCccc-----cCC--------------------------CCCCEEecccccccccCCcccCCCCCCCEEEccCc
Q 039322 155 NNITGGIPREI-----GNS--------------------------SQLQALDLSLNHIVGEIPKELGKLNSLTELILRGN 203 (708)
Q Consensus 155 N~i~~~~~~~~-----~~l--------------------------~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 203 (708)
|.+++.+|..+ ..+ .+|++|++++|.+.... ....+++|++|++++|
T Consensus 286 n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQN 363 (562)
T ss_dssp EEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSS
T ss_pred cEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCC
Confidence 44443333332 111 12333444444333111 1167889999999999
Q ss_pred cccccCCcccCCCCCCCeEeccCCcccccC--CCCCCccccceeecccCccccc-CCChhhhhhcccchhhcccccCCCC
Q 039322 204 QFTGRLPPEIGSLVDLEYLDLSANRFNNSV--PENLGNLLKLHYLGLSNNQFVL-ELPKELEKLVQLSELDASHNLFGGE 280 (708)
Q Consensus 204 ~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~--~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~ls~N~i~~~ 280 (708)
++++..|..+..+++|++|+|++|++++.. |..+.++++|+.|++++|++++ ..+..+..+++|+.|++++|++++.
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGG
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcc
Confidence 999888999999999999999999999633 4668899999999999999997 4444688899999999999999866
Q ss_pred CchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCC-ccccccCcccccccccCcCCCC
Q 039322 281 IPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN-STAFRNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 281 ~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~ 353 (708)
.+..+. ++|+.|++++|+++ .+|..+..+++|+.|++++|++++.++. ...++.++.+.+.+|||.|+|+
T Consensus 444 ~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 444 VFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp GGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred hhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 555443 79999999999999 5666666999999999999999987666 5677889999999999999885
No 218
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.9e-39 Score=339.83 Aligned_cols=261 Identities=21% Similarity=0.288 Sum_probs=195.3
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR---- 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~---- 509 (708)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc--CChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 37899999999999999999965 468899999997532 23345677889999999999999999999997654
Q ss_pred --eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 510 --HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 510 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
..++||||+++ +|.+++. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEee
Confidence 78999999975 7888874 2378999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------c-----
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------T----- 655 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------~----- 655 (708)
+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||............ .
T Consensus 173 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 173 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp C-----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHT
T ss_pred cccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99865432 2234567899999999999988999999999999999999999999743221000000 0
Q ss_pred --ccc---------------cccccC-CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 656 --DIA---------------LDEILD-PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 656 --~~~---------------~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
... ...... ...+............+.+++.+||+.||++|||++|+++|-+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 321 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence 000 000000 0011111122333567899999999999999999999999854
No 219
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=336.94 Aligned_cols=261 Identities=23% Similarity=0.349 Sum_probs=204.0
Q ss_pred hccccccceeccccCccEEEEEe-----CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~ 509 (708)
.++|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence 36799999999999999999973 46889999998763 2345678999999999999999999999987654
Q ss_pred --eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 510 --HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 510 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
..++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CCceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 7899999999999999997643 3589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccc----cccc----cc
Q 039322 588 IAKFLKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS----SSLN----TD 656 (708)
Q Consensus 588 ~a~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~----~~~~----~~ 656 (708)
++......... .....++..|+|||.+.+..++.++||||||+++|||+||..||........ .... ..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence 99876544332 1234567789999999988899999999999999999999999763211000 0000 00
Q ss_pred cccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 IALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+......+.+. ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 271 ~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPD---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHHHHTTCCCCCCT---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 0011111111111111 12345889999999999999999999999875
No 220
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=360.06 Aligned_cols=341 Identities=18% Similarity=0.197 Sum_probs=263.4
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
++|++|+|++|+|+++.+..|.++++|++|+|++|++++..|..+.. ++|+.|++++|.++. +|.. .+++|++|++
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEec
Confidence 46888888888888877788888888888888888888877777765 788888888888886 4444 7788888888
Q ss_pred cCCcccc-ccCccCcCCCCCcEEEccCCccccccccccCCCCCC--CEEEcccCcc--eeeCCCCCCCCC----------
Q 039322 81 SENHFQG-TIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNL--TFIDLSRNDF--YGEISSNWGKCP---------- 145 (708)
Q Consensus 81 ~~n~i~~-~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L--~~L~l~~n~l--~~~~~~~~~~l~---------- 145 (708)
++|.+++ ..|..|+++++|++|++++|.+++ ..|..+++| ++|++++|.+ .+..+..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 8888886 357788888888888888888875 345666666 8888888877 445554444422
Q ss_pred -------------------------------------------------------------------------CCCEEEc
Q 039322 146 -------------------------------------------------------------------------KLGTLNV 152 (708)
Q Consensus 146 -------------------------------------------------------------------------~L~~L~L 152 (708)
+|++|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 5666666
Q ss_pred ccCcccccCCccc-----cCCCCCCEEecccccc--------------------------cccCCcccCCCCCCCEEEcc
Q 039322 153 SMNNITGGIPREI-----GNSSQLQALDLSLNHI--------------------------VGEIPKELGKLNSLTELILR 201 (708)
Q Consensus 153 ~~N~i~~~~~~~~-----~~l~~L~~L~L~~n~l--------------------------~~~~~~~~~~l~~L~~L~l~ 201 (708)
++|++++..|..+ ..+++|+.+++++|.+ .... .+..+++|++|+++
T Consensus 255 ~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls 332 (520)
T 2z7x_B 255 SNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFS 332 (520)
T ss_dssp EEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECC
T ss_pred ecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeE
Confidence 6666665556555 4555544444444444 2110 12677889999999
Q ss_pred CccccccCCcccCCCCCCCeEeccCCcccc--cCCCCCCccccceeecccCcccccCCCh-hhhhhcccchhhcccccCC
Q 039322 202 GNQFTGRLPPEIGSLVDLEYLDLSANRFNN--SVPENLGNLLKLHYLGLSNNQFVLELPK-ELEKLVQLSELDASHNLFG 278 (708)
Q Consensus 202 ~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~ls~N~i~ 278 (708)
+|++++..|..+..+++|++|+|++|++++ ..|..+..+++|+.|++++|++++.+|. .+..+++|+.|++++|+++
T Consensus 333 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~ 412 (520)
T 2z7x_B 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT 412 (520)
T ss_dssp SSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCC
T ss_pred CCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCC
Confidence 999998788888899999999999999986 4456688889999999999999874454 4778889999999999998
Q ss_pred CCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCC-ccccccCcccccccccCcCCCC
Q 039322 279 GEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN-STAFRNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 279 ~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~ 353 (708)
+..+..+. ++|+.|++++|+++ .+|..+..+++|+.|++++|+++..++. ...++.++.+.+.+|++.|+|+
T Consensus 413 ~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 413 DTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 66665543 78999999999999 6777777999999999999999976665 5567889999999999999874
No 221
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.8e-39 Score=348.30 Aligned_cols=198 Identities=21% Similarity=0.303 Sum_probs=172.2
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc------cCCceeeEEEEEee
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI------RHRNIVKFYGFCSH 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~l~~~~~~ 507 (708)
..+|++.+.||+|+||.||+|.. .+++.||||+++.. ......+.+|+++++.+ +|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 36799999999999999999965 46899999999752 23456778888888887 46799999999999
Q ss_pred CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc--EEEee
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE--AHVAD 585 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--~kl~D 585 (708)
.+..++||||+. ++|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++. +||+|
T Consensus 171 ~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 171 RNHICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp TTEEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred CCeEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 999999999996 599999876542 3489999999999999999999999 9999999999999999987 99999
Q ss_pred cccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFL 645 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~ 645 (708)
||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 246 FG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 246 FGSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 9999765432 23457899999999999989999999999999999999999999743
No 222
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.9e-39 Score=332.10 Aligned_cols=255 Identities=26% Similarity=0.392 Sum_probs=194.1
Q ss_pred ccccccceeccccCccEEEEEeC--CCc--EEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP--SGQ--VVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
++|++.+.||+|+||.||+|.+. +++ .||||+++.... ......+.+.+|++++++++||||+++++++..++ .
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCcc-CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 68999999999999999999753 333 689999875321 12345678999999999999999999999998765 8
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 89999999999999997543 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 039322 592 LKPESSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 592 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
....... .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||..... ......+.....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~ 242 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--------SQILHKIDKEGE 242 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTSCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--------HHHHHHHHccCC
Confidence 6544332 223456788999999988889999999999999999999 9999874321 111111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+. ....+..+.+++.+||+.||++|||+++++++|+
T Consensus 243 ~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 243 RLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC--CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1100 0112345889999999999999999999999875
No 223
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.8e-39 Score=332.96 Aligned_cols=255 Identities=24% Similarity=0.377 Sum_probs=195.4
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee-----
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH----- 507 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----- 507 (708)
..++|++.+.||+|+||.||+|.. .+++.||||.+.. .....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-----EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-----cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh
Confidence 357899999999999999999975 4789999999864 23456789999999999999999999998865
Q ss_pred --------CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC
Q 039322 508 --------ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY 579 (708)
Q Consensus 508 --------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 579 (708)
.+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTS
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCC
Confidence 356899999999999999997543 3478899999999999999999999 999999999999999999
Q ss_pred cEEEeecccccccCCCC--------------CccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCc
Q 039322 580 EAHVADFGIAKFLKPES--------------SNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDF 644 (708)
Q Consensus 580 ~~kl~Dfg~a~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~ 644 (708)
.+||+|||++....... .......|++.|+|||++.+. .++.++||||+|+++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 99999999998654321 122345689999999998764 68899999999999999998 5432
Q ss_pred cccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 645 LSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
... .......+.......+.......+..+.+++.+||+.||++|||++|++++-++
T Consensus 231 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~ 287 (303)
T 1zy4_A 231 GME-------RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287 (303)
T ss_dssp HHH-------HHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCS
T ss_pred chh-------HHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCc
Confidence 110 011111111111111111112223457889999999999999999999998653
No 224
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=335.88 Aligned_cols=251 Identities=23% Similarity=0.339 Sum_probs=185.3
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEe------
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCS------ 506 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~------ 506 (708)
..+|++.+.||+|+||.||+|.. .+++.||||++... .......+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 36899999999999999999975 47899999998542 3345677899999999996 999999999994
Q ss_pred --eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEccCCCCCeeeCCCCcEE
Q 039322 507 --HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPP--IVHQDISSKNLLLDLEYEAH 582 (708)
Q Consensus 507 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~~~~~~k 582 (708)
.....++||||+. |+|.+++........+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+|
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEE
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEE
Confidence 3345799999996 69999987644445699999999999999999999998 8 99999999999999999999
Q ss_pred EeecccccccCCCCCc------------cccccccccccCcccc---ccCCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 039322 583 VADFGIAKFLKPESSN------------WTEFAGTYGYVAPELA---YTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSL 647 (708)
Q Consensus 583 l~Dfg~a~~~~~~~~~------------~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~ 647 (708)
|+|||++......... .....+++.|+|||++ .+..++.++||||||+++|+|++|+.||+....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 9999999876543221 1134589999999998 566788999999999999999999999874321
Q ss_pred ccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 648 ISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. ....... .+.... ....+.+++.+||+.||++|||++|++++|+
T Consensus 259 ~~--------~~~~~~~--~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 259 LR--------IVNGKYS--IPPHDT----QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp ---------------CC--CCTTCC----SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HH--------hhcCccc--CCcccc----cchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11 0111010 001100 1123778999999999999999999999985
No 225
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=335.26 Aligned_cols=257 Identities=21% Similarity=0.350 Sum_probs=199.9
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee----CC
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH----AR 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----~~ 509 (708)
.++|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++||||+++++++.. ..
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 37899999999999999999975 57899999998642 33456789999999999999999999999873 34
Q ss_pred eeEEEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 510 HSFLVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 510 ~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 7899999999999999997532 234589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc---------cccccccccccCccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCccccccccccccc
Q 039322 589 AKFLKPESSN---------WTEFAGTYGYVAPELAYTMK---ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTD 656 (708)
Q Consensus 589 a~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~ 656 (708)
+......... .....|++.|+|||.+.+.. ++.++||||||+++|||++|+.||+....... ...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~ 257 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD---SVA 257 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS---CHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc---hhh
Confidence 8765321111 12345689999999987554 68899999999999999999999863211000 000
Q ss_pred cccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 IALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..... ....+... .....+.+++.+||+.||++|||++|++++|+
T Consensus 258 ~~~~~--~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 258 LAVQN--QLSIPQSP----RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHHC--C--CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhhc--cCCCCccc----cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 00011 11111111 12235889999999999999999999999885
No 226
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.3e-39 Score=335.43 Aligned_cols=266 Identities=26% Similarity=0.392 Sum_probs=186.6
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..++|++.+.||+|+||.||+|.. .+++.||||.+.... .....+.+.+|++++++++||||+++++++..++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK---CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh---cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 347899999999999999999965 468899999987532 1234567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccc-----cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 513 LVYELLERGSLAAILSSDT-----AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~-----~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
+||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence 9999999999999986421 234589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC-----ccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 039322 588 IAKFLKPESS-----NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDE 661 (708)
Q Consensus 588 ~a~~~~~~~~-----~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 661 (708)
++........ ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...................
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 246 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCC
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCc
Confidence 9986643321 1234568999999998875 568899999999999999999999997432211000000000000
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
... ... ...........+.+++.+||+.||++|||++|+++|-+
T Consensus 247 ~~~-~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 290 (303)
T 2vwi_A 247 LET-GVQ-DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290 (303)
T ss_dssp TTC-------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTT
T ss_pred ccc-ccc-cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 000 000 00000111235789999999999999999999998754
No 227
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.2e-39 Score=329.70 Aligned_cols=256 Identities=22% Similarity=0.334 Sum_probs=205.5
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 512 (708)
..++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++..++..+
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA--KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB--SSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc--chHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 4578999999999999999999764 789999999865321 1234677899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC---CcEEEeecccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE---YEAHVADFGIA 589 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~a 589 (708)
+||||+++++|.+++.... .+++..++.++.|++.||+|||++ |++||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999999886543 489999999999999999999999 99999999999999764 46999999999
Q ss_pred cccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 039322 590 KFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPP 669 (708)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (708)
....... ......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||..... ......+.......
T Consensus 172 ~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~ 241 (287)
T 2wei_A 172 TCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDILKRVETGKYAF 241 (287)
T ss_dssp GTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCC
T ss_pred eeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCC
Confidence 8665432 2334568999999998765 488999999999999999999999874321 11112222222222
Q ss_pred CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 670 PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 670 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+..+.+++.+||+.||++|||++|++++-+
T Consensus 242 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 279 (287)
T 2wei_A 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279 (287)
T ss_dssp CSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred CchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHH
Confidence 21112222346889999999999999999999998743
No 228
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.7e-39 Score=362.75 Aligned_cols=246 Identities=24% Similarity=0.369 Sum_probs=194.8
Q ss_pred ceeccccCccEEEEEe---CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEEEEec
Q 039322 442 YCIGNGGHGSVYRAEL---PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLVYELL 518 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~ 518 (708)
+.||+|+||.||+|.+ ..++.||||+++... ......+++.+|++++++++||||+++++++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG--GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 4799999999999954 246789999997532 222346789999999999999999999999965 5578999999
Q ss_pred cCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 039322 519 ERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSN 598 (708)
Q Consensus 519 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 598 (708)
++|+|.+++... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 452 ~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 452 ELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999999654 3489999999999999999999999 9999999999999999999999999999876544322
Q ss_pred ---cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 599 ---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 599 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+........+..
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~~~~i~~~~~~~~p~~- 596 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTAMLEKGERMGCPAG- 596 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCCCCCTT-
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCCC-
Confidence 223456789999999999999999999999999999998 9999974322 111111212111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+..+.+++.+||+.||++|||+++|++.|+
T Consensus 597 --~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 597 --CPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp --CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2345889999999999999999999999875
No 229
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.5e-39 Score=334.02 Aligned_cols=255 Identities=20% Similarity=0.273 Sum_probs=199.5
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEee--CCee
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSH--ARHS 511 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~--~~~~ 511 (708)
++|++.+.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 7899999999999999999964 57899999998752 2567889999999997 9999999999988 5678
Q ss_pred EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEEeeccccc
Q 039322 512 FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-EAHVADFGIAK 590 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~a~ 590 (708)
++||||+++++|.+++. .+++..++.++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||++.
T Consensus 109 ~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 99999999999999884 278899999999999999999999 999999999999999776 89999999998
Q ss_pred ccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccc-------------------
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISS------------------- 650 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~------------------- 650 (708)
...... ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||........
T Consensus 180 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 180 FYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp ECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 765433 3345678999999999877 6689999999999999999999999842211000
Q ss_pred -cccccccccccccCCCCCC------CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 651 -SSLNTDIALDEILDPRLPP------PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 651 -~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
................... ...........+.+++.+||+.||++|||++|+++|-+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~ 322 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGG
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCcc
Confidence 0000000000000000000 00001112346889999999999999999999999865
No 230
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.5e-39 Score=340.29 Aligned_cols=259 Identities=19% Similarity=0.313 Sum_probs=204.9
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcch-------------hHhHHHHHHHHHHHHhccCCceeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQ-------------IADQKEFLIEVKALTEIRHRNIVKF 501 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~iv~l 501 (708)
.++|++.+.||+|+||.||+|.. +|+.||||++........ ....+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 37899999999999999999988 899999999864211000 0112789999999999999999999
Q ss_pred EEEEeeCCeeEEEEEeccCCCHHHH------hcccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEccCCCCCee
Q 039322 502 YGFCSHARHSFLVYELLERGSLAAI------LSSDTAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHQDISSKNLL 574 (708)
Q Consensus 502 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nil 574 (708)
++++.+++..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ + |++||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999998 54321 3568999999999999999999999 8 9999999999999
Q ss_pred eCCCCcEEEeecccccccCCCCCccccccccccccCccccccC-CCCc-chhHHHHHHHHHHHHhCCCCCCccccccccc
Q 039322 575 LDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM-KITE-KCDVYSFGVLVLEAIKGKHPRDFLSLISSSS 652 (708)
Q Consensus 575 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~DvwslG~~l~elltg~~p~~~~~~~~~~~ 652 (708)
++.++.+||+|||.+...... ......++..|+|||.+.+. .++. ++||||||+++|||++|+.||......
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 999999999999999876433 33456789999999998877 5666 999999999999999999999743220
Q ss_pred cccccccccccCCCCCCCC---------------chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 653 LNTDIALDEILDPRLPPPS---------------RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......+.......+. .........+.+++.+||+.||++|||++|+++|-+
T Consensus 259 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~ 325 (348)
T 2pml_X 259 ---VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW 325 (348)
T ss_dssp ---HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred ---HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence 0111111111111000 000122346889999999999999999999998754
No 231
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.2e-39 Score=329.40 Aligned_cols=257 Identities=21% Similarity=0.355 Sum_probs=188.6
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|.. .+|+.||+|+++... ........+.++...++.++||||+++++++.+++..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV--NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC-----CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc--CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 47899999999999999999965 578999999997632 222333445555556888899999999999999999999
Q ss_pred EEEeccCCCHHHHhccc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 514 VYELLERGSLAAILSSD-TAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
||||+++ +|.+++... .....+++..++.++.|++.||+|||++. |++||||||+||+++.++.+||+|||++...
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9999975 888877542 12345899999999999999999999853 8999999999999999999999999999866
Q ss_pred CCCCCccccccccccccCcccc----ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC-CCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELA----YTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD-PRL 667 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 667 (708)
.... ......|++.|+|||.+ .+..++.++||||+|+++|+|++|+.||+..... ......... ...
T Consensus 161 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~ 232 (290)
T 3fme_A 161 VDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEPSP 232 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSCCC
T ss_pred cccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-------HHHHHHHhccCCC
Confidence 5432 23345789999999996 4567889999999999999999999998732110 111111111 111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.. ..+..+.+++.+||+.||++|||++|+++|-+
T Consensus 233 ~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 233 QLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp CCCTT---TSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred Ccccc---cCCHHHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 11111 12335889999999999999999999998754
No 232
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.2e-39 Score=341.31 Aligned_cols=274 Identities=21% Similarity=0.265 Sum_probs=202.1
Q ss_pred hHHHHHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcc-------hhHhHHHHHHHHHHHHhccCCcee
Q 039322 427 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCD-------QIADQKEFLIEVKALTEIRHRNIV 499 (708)
Q Consensus 427 ~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~iv 499 (708)
...++....++|++.+.||+|+||.||+|...+|+.||||++....... .....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4567788889999999999999999999988889999999986532211 122347899999999999999999
Q ss_pred eEEEEEee-----CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCee
Q 039322 500 KFYGFCSH-----ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLL 574 (708)
Q Consensus 500 ~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nil 574 (708)
++++++.. ....++||||+. |+|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99999854 336799999998 58888886443 4589999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeecccccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc
Q 039322 575 LDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL 653 (708)
Q Consensus 575 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~ 653 (708)
++.++.+||+|||++...... .......+++.|+|||++.+ ..++.++||||+|+++|+|++|+.||...........
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred EcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999999754432 23345678999999998876 6789999999999999999999999974321100000
Q ss_pred c---------------cccccccccCCCCCC-CCchh----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 N---------------TDIALDEILDPRLPP-PSRSV----QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ~---------------~~~~~~~~~~~~~~~-~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. ............... +.... ......+.+++.+||+.||++|||++|+++|-+
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 0 000000111111100 00011 112345889999999999999999999998854
No 233
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=343.21 Aligned_cols=255 Identities=18% Similarity=0.235 Sum_probs=198.4
Q ss_pred ccccccceeccccCccEEEEEeCC---------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceee------
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPS---------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVK------ 500 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~------ 500 (708)
++|++.+.||+|+||.||+|.... ++.||+|.+... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 689999999999999999997653 789999998752 35778999999999999887
Q ss_pred ---------EEEEEee-CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCC
Q 039322 501 ---------FYGFCSH-ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISS 570 (708)
Q Consensus 501 ---------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~ 570 (708)
+++++.. ++..++||||+ +++|.+++.... ...+++..++.++.|++.||+|||++ ||+||||||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 6777776 67889999999 999999997652 24589999999999999999999999 999999999
Q ss_pred CCeeeCCCC--cEEEeecccccccCCCCC-------ccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 039322 571 KNLLLDLEY--EAHVADFGIAKFLKPESS-------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641 (708)
Q Consensus 571 ~Nill~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p 641 (708)
+||+++.++ .+||+|||+++....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999998 899999999986643221 12335789999999999998999999999999999999999999
Q ss_pred CCccccccccccccccccccccC--CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 642 RDFLSLISSSSLNTDIALDEILD--PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
|.......... ......+.. ..+..........+..+.+++.+||+.||++|||++++++.|+
T Consensus 268 f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 268 WTNCLPNTEDI---MKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp TGGGTTCHHHH---HHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cccCCcCHHHH---HHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 97432110000 000000000 0000000000011245889999999999999999999999875
No 234
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.2e-39 Score=341.68 Aligned_cols=260 Identities=22% Similarity=0.341 Sum_probs=184.5
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA----- 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 508 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+++++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 37899999999999999999964 578999999997633 2334567888999999999999999999998654
Q ss_pred -CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 509 -RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 509 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
...++|+|++ +++|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 5679999999 6799998864 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-------------
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL------------- 653 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~------------- 653 (708)
+++.... ......+|..|+|||++.+ ..++.++||||+||++|||++|+.||...........
T Consensus 178 ~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 178 LARHTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred ccccccc---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9986542 2344678999999999876 6789999999999999999999999975332110000
Q ss_pred --ccccccccccC--CCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 --NTDIALDEILD--PRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 --~~~~~~~~~~~--~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+.. +..+... .........+.+|+.+||+.||++|||++|+++|-+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~ 314 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChh
Confidence 00000000000 0000000 000111245789999999999999999999998754
No 235
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.6e-39 Score=339.36 Aligned_cols=262 Identities=22% Similarity=0.312 Sum_probs=201.0
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA----- 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 508 (708)
.++|++.+.||+|+||.||+|.. .+++.||||++... ......+.+.+|++++++++||||+++++++..+
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF---EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT---TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc---cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence 36899999999999999999965 46889999999752 2234457789999999999999999999999765
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
...++||||+.+ +|.+++... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~~-~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLMET-DLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCSE-EHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccCc-CHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 368999999975 999998643 389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc---cccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------ccc
Q 039322 589 AKFLKPESSN---WTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------TDI 657 (708)
Q Consensus 589 a~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------~~~ 657 (708)
+......... .....||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||............ ...
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 9876533221 244578999999998654 45899999999999999999999999743221100000 000
Q ss_pred cc------------ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 AL------------DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.. .........+...........+.+++.+||+.||++|||++|+++|-+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 316 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 00 000000000000000112345889999999999999999999998755
No 236
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.8e-39 Score=343.64 Aligned_cols=261 Identities=23% Similarity=0.242 Sum_probs=194.8
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCC-----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHAR----- 509 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 509 (708)
..+|++.+.||+|+||.||+|....+..||+|++...... ..+|+++++.++||||+++++++...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~--------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~ 110 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF--------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE 110 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS--------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch--------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence 3679999999999999999998877777999988653211 225999999999999999999996543
Q ss_pred -eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-CCCcEEEeecc
Q 039322 510 -HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD-LEYEAHVADFG 587 (708)
Q Consensus 510 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg 587 (708)
..++||||++++.+............+++..++.++.|++.||+|||++ ||+||||||+||+++ .++.+||+|||
T Consensus 111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 3789999998754444333222345689999999999999999999999 999999999999998 78999999999
Q ss_pred cccccCCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------cc---
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------TD--- 656 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------~~--- 656 (708)
+|+...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||............ ..
T Consensus 188 ~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 188 SAKILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266 (394)
T ss_dssp TCEECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred CcccccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 998764433 23455789999999998765 5899999999999999999999999753321000000 00
Q ss_pred -cccccccCCCCCCCC-chhH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 -IALDEILDPRLPPPS-RSVQ-----EKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 -~~~~~~~~~~~~~~~-~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..........++... .... .....+.+++.+||+.||++|||+.|+++|-+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 324 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChh
Confidence 000011111111100 0000 12346889999999999999999999998754
No 237
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-38 Score=361.16 Aligned_cols=339 Identities=18% Similarity=0.242 Sum_probs=255.0
Q ss_pred CCcEEECCCCcccccCCccccCCCCCCEEEeeCc----------------------------------------------
Q 039322 3 SLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYN---------------------------------------------- 36 (708)
Q Consensus 3 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n---------------------------------------------- 36 (708)
.++.|+|++|++++..|.+++++++|++|+|++|
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~ 161 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDL 161 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHH
Confidence 4678888888888888888888888888888877
Q ss_pred --------------------------------eeeeeCCCCCCC-CCcccccccCCCccCC-----------------CC
Q 039322 37 --------------------------------NLSGFIPPSLEN-PMLTRPGLDFNHFTSY-----------------LP 66 (708)
Q Consensus 37 --------------------------------~i~~~~~~~~~~-~~l~~l~l~~n~~~~~-----------------~~ 66 (708)
++++ +|..+.. ++|+.|++++|.+++. +|
T Consensus 162 ~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip 240 (636)
T 4eco_A 162 IKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKT 240 (636)
T ss_dssp HHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCc
Confidence 4444 5555544 6788888888888774 77
Q ss_pred cccc--CCCCccEEeccCCccccccCccCcCCCCCcEEEccCCc-ccc-ccccccCCC------CCCCEEEcccCcceee
Q 039322 67 HNVC--RGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNN-LTG-NISEALGIY------PNLTFIDLSRNDFYGE 136 (708)
Q Consensus 67 ~~~~--~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~-i~~-~~~~~~~~~------~~L~~L~l~~n~l~~~ 136 (708)
..++ .+++|++|++++|.+.+.+|..|.++++|++|+|++|+ +++ ..|..+..+ ++|++|++++|+++ .
T Consensus 241 ~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ 319 (636)
T 4eco_A 241 EDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-T 319 (636)
T ss_dssp SCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-S
T ss_pred hhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-c
Confidence 7777 88888888888888888888888888888888888887 776 556666555 78888888888887 4
Q ss_pred CCC--CCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCC-CCEEEccCccccccCCccc
Q 039322 137 ISS--NWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNS-LTELILRGNQFTGRLPPEI 213 (708)
Q Consensus 137 ~~~--~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~ 213 (708)
.+. .+..+++|+.|++++|++++.+| .|..+++|++|+|++|+++ .+|..+..+++ |++|++++|.++ .+|..+
T Consensus 320 ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~ 396 (636)
T 4eco_A 320 FPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIF 396 (636)
T ss_dssp CCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCC
T ss_pred cCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhh
Confidence 455 67788888888888888886666 7777888888888888887 66777777777 888888888888 667666
Q ss_pred CCCC--CCCeEeccCCcccccCCCCCC-------ccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchh
Q 039322 214 GSLV--DLEYLDLSANRFNNSVPENLG-------NLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQ 284 (708)
Q Consensus 214 ~~~~--~L~~L~l~~N~i~~~~~~~~~-------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~ 284 (708)
..++ +|++|++++|.+++..|..+. .+++|+.|+|++|+++...+..+..+++|+.|+|++|.++...+..
T Consensus 397 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~ 476 (636)
T 4eco_A 397 DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNS 476 (636)
T ss_dssp CTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSS
T ss_pred hhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHH
Confidence 6554 788888888888877777777 6778888888888888555555666788888888888887333333
Q ss_pred hcCc-------ccCCceecccccccCCCCCccc--ccccccEEecCCCcCCCCCCCccccccCccccccccc
Q 039322 285 ICSL-------KSLEKLNLSHNNLSGSIPNCFE--GIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNK 347 (708)
Q Consensus 285 ~~~~-------~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~ 347 (708)
+... ++|+.|+|++|+++ .+|..+. .+++|+.|++++|++++.+.....++.++.+.+.+|+
T Consensus 477 ~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~ 547 (636)
T 4eco_A 477 LKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQR 547 (636)
T ss_dssp SEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCB
T ss_pred hccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCc
Confidence 3322 27888888888887 5666665 7788888888888888755555667777777776665
No 238
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.5e-38 Score=329.12 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=198.8
Q ss_pred HHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc--CCceeeEEEEEeeCCe
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR--HRNIVKFYGFCSHARH 510 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~l~~~~~~~~~ 510 (708)
...++|++.+.||+|+||.||+|...+++.||||++.... ......+.+.+|++++++++ |+||+++++++..++.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc--ccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 3457899999999999999999988889999999987532 22345678999999999997 5999999999999999
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.++||| +.+++|.+++.... .+++..++.++.|++.||+|||++ +++||||||+||+++ ++.+||+|||++.
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~ 174 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 174 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred EEEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeeccccc
Confidence 999999 56789999997543 489999999999999999999999 999999999999996 4899999999998
Q ss_pred ccCCCCCc--cccccccccccCcccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccc
Q 039322 591 FLKPESSN--WTEFAGTYGYVAPELAYT-----------MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDI 657 (708)
Q Consensus 591 ~~~~~~~~--~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~ 657 (708)
........ .....|++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ...
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~ 247 (313)
T 3cek_A 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QIS 247 (313)
T ss_dssp C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHH
T ss_pred cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-------HHH
Confidence 76543321 234568999999999865 4678899999999999999999999863211 111
Q ss_pred ccccccCCCCCCC-CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 658 ALDEILDPRLPPP-SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 658 ~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......++..... +... ...+.+++.+||+.||++|||++|++++-+
T Consensus 248 ~~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 248 KLHAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp HHHHHHCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHHHhcccccCCcccc---hHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 1122222211111 0111 235788999999999999999999998754
No 239
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.2e-38 Score=341.49 Aligned_cols=262 Identities=22% Similarity=0.279 Sum_probs=201.6
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc--------CCceeeEEEEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR--------HRNIVKFYGFC 505 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~~iv~l~~~~ 505 (708)
.++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 37899999999999999999964 56889999999752 244677889999999996 78899999999
Q ss_pred e----eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC--
Q 039322 506 S----HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEY-- 579 (708)
Q Consensus 506 ~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-- 579 (708)
. .....++||||+ ++++.+++.... ...+++..++.++.||+.||+|||+++ ||+||||||+|||++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 7 456889999999 556666665432 245899999999999999999999964 899999999999999775
Q ss_pred -----------------------------------------------cEEEeecccccccCCCCCccccccccccccCcc
Q 039322 580 -----------------------------------------------EAHVADFGIAKFLKPESSNWTEFAGTYGYVAPE 612 (708)
Q Consensus 580 -----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE 612 (708)
.+||+|||++...... .....||+.|+|||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE 263 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCCh
Confidence 7999999999876432 34457899999999
Q ss_pred ccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-------------c------ccccccccCC--------
Q 039322 613 LAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN-------------T------DIALDEILDP-------- 665 (708)
Q Consensus 613 ~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-------------~------~~~~~~~~~~-------- 665 (708)
++.+..++.++|||||||++|||++|+.||............ . ......+...
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT 343 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc
Confidence 999988999999999999999999999999743211100000 0 0000000000
Q ss_pred CCCC---------CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 666 RLPP---------PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 666 ~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
...+ ...........+.+++.+||+.||++|||++|+++|-++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~ 395 (397)
T 1wak_A 344 KLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395 (397)
T ss_dssp CCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGG
T ss_pred ccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccc
Confidence 0000 001124455678999999999999999999999998653
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=8.6e-39 Score=333.75 Aligned_cols=255 Identities=21% Similarity=0.235 Sum_probs=174.1
Q ss_pred hccccccc-eeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee----C
Q 039322 435 TNDFDAQY-CIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH----A 508 (708)
Q Consensus 435 ~~~~~~~~-~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----~ 508 (708)
.++|.+.+ .||+|+||.||+|... +|+.||||++... .. ...+....++.++||||+++++++.. +
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PK---ARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HH---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HH---HHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 47898854 6999999999999765 6899999998652 11 11222233566789999999999976 4
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC---CcEEEee
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE---YEAHVAD 585 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~D 585 (708)
...++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.+ +.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 568999999999999999976542 4589999999999999999999999 99999999999999864 5599999
Q ss_pred cccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 665 (708)
||++...... ......+++.|+|||++.+..++.++||||||+++|+|++|+.||.......... .....+...
T Consensus 175 fg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~ 248 (336)
T 3fhr_A 175 FGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP----GMKRRIRLG 248 (336)
T ss_dssp CTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh----hHHHhhhcc
Confidence 9999865432 2344578999999999988889999999999999999999999996433211100 001111111
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+..........+.+++.+||+.||++|||++|+++|-+
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW 290 (336)
T ss_dssp --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 111111111122345889999999999999999999999764
No 241
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3e-38 Score=330.77 Aligned_cols=260 Identities=18% Similarity=0.277 Sum_probs=202.8
Q ss_pred hccccccceeccccCccEEEEEe--CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc------eeeEEEEEe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL--PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN------IVKFYGFCS 506 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~l~~~~~ 506 (708)
.++|++.+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+++++.++|++ ++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 36899999999999999999965 36889999998742 244677889999999997654 999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---------
Q 039322 507 HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL--------- 577 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~--------- 577 (708)
..+..++||||+ +++|.+++..... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.
T Consensus 88 ~~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 88 HHGHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred cCCcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 999999999999 8899999976542 3588999999999999999999999 9999999999999987
Q ss_pred ----------CCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 039322 578 ----------EYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSL 647 (708)
Q Consensus 578 ----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~ 647 (708)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred ccccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 668999999999865432 2345789999999999998999999999999999999999999974322
Q ss_pred ccccccc-------cccccc-----ccc-C-------------------CCCCCCCchhHHHHHHHHHHHHhccCCCCCC
Q 039322 648 ISSSSLN-------TDIALD-----EIL-D-------------------PRLPPPSRSVQEKLISIMEVAFSCLNESPES 695 (708)
Q Consensus 648 ~~~~~~~-------~~~~~~-----~~~-~-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 695 (708)
....... ...... ... . ................+.+++.+||+.||++
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 1100000 000000 000 0 0000000011233457889999999999999
Q ss_pred CCCHHHHHHHhh
Q 039322 696 RPTMKVVTQQVR 707 (708)
Q Consensus 696 RPs~~evl~~l~ 707 (708)
|||++|+++|-+
T Consensus 320 Rpt~~ell~hp~ 331 (339)
T 1z57_A 320 RITLREALKHPF 331 (339)
T ss_dssp SCCHHHHTTSGG
T ss_pred ccCHHHHhcCHH
Confidence 999999998754
No 242
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=331.42 Aligned_cols=261 Identities=23% Similarity=0.294 Sum_probs=192.9
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEe-------
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCS------- 506 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~------- 506 (708)
.++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 368999999999999999999765 5899999998752 3345678899999999999999999999873
Q ss_pred -------eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-CC
Q 039322 507 -------HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD-LE 578 (708)
Q Consensus 507 -------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~ 578 (708)
+.+..++||||++ |+|.+++.. ..+++..++.++.|++.||+|||++ |++||||||+||+++ .+
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 3467899999998 599999864 3489999999999999999999999 999999999999997 56
Q ss_pred CcEEEeecccccccCCCCC---ccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-
Q 039322 579 YEAHVADFGIAKFLKPESS---NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL- 653 (708)
Q Consensus 579 ~~~kl~Dfg~a~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~- 653 (708)
+.+||+|||++........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 237 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 7999999999987643221 2234567899999998765 6789999999999999999999999974332110000
Q ss_pred ------cccccccc-----------ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 654 ------NTDIALDE-----------ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 654 ------~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.......+ .......+...........+.+++.+||+.||++|||++|+++|-+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY 308 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHH
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcc
Confidence 00000000 0000000000000112346889999999999999999999998754
No 243
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=366.44 Aligned_cols=351 Identities=21% Similarity=0.167 Sum_probs=274.9
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeee-eCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEE
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSG-FIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYF 78 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L 78 (708)
+++|++|||++|+|+.+.+..|.++++|++|+|++|...+ +.|..|.. ++|+.|++++|.+.+..|..|..+++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 3689999999999999999999999999999999995444 44777866 899999999999999999999999999999
Q ss_pred eccCCccccccCcc--CcCCCCCcEEEccCCccccccc-cccCCCCCCCEEEcccCcceeeCCCCCCC------------
Q 039322 79 GVSENHFQGTIPKI--LRNCSSLIRVRLNSNNLTGNIS-EALGIYPNLTFIDLSRNDFYGEISSNWGK------------ 143 (708)
Q Consensus 79 ~l~~n~i~~~~~~~--~~~l~~L~~L~l~~n~i~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~------------ 143 (708)
+|++|.+++..+.. |.++++|++|+|++|.++++.+ ..|+++++|++|+|++|.++++.+..+..
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999999866655 9999999999999999997765 57999999999999999886543322211
Q ss_pred --------------------------------------------------------------------------------
Q 039322 144 -------------------------------------------------------------------------------- 143 (708)
Q Consensus 144 -------------------------------------------------------------------------------- 143 (708)
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence
Q ss_pred --CCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCe
Q 039322 144 --CPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEY 221 (708)
Q Consensus 144 --l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 221 (708)
.++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 134566666666666666667777778888888888887777777778888888888888887777777888888888
Q ss_pred EeccCCcccccCCCCCCccccceeecccCcccccCCC----------------------------------------hhh
Q 039322 222 LDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELP----------------------------------------KEL 261 (708)
Q Consensus 222 L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----------------------------------------~~~ 261 (708)
|+|++|+++...+..|..+++|+.|+|++|.+++... ..+
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~ 422 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFL 422 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHH
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhh
Confidence 8888888877767777778888888887777664210 113
Q ss_pred hhhcccchhhcccccCCCCC------------------------------chhhcCcccCCceecccccccCCCCCcccc
Q 039322 262 EKLVQLSELDASHNLFGGEI------------------------------PFQICSLKSLEKLNLSHNNLSGSIPNCFEG 311 (708)
Q Consensus 262 ~~l~~L~~L~ls~N~i~~~~------------------------------~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~ 311 (708)
..+++|+.|+|++|++++.. +..+..+++|+.|+|++|++++..+..|..
T Consensus 423 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 502 (844)
T 3j0a_A 423 LRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSH 502 (844)
T ss_dssp TTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSS
T ss_pred hcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccc
Confidence 35566666666666665321 233556788888888888888888888889
Q ss_pred cccccEEecCCCcCCCCCCCccccccCcccccccccCcCCC
Q 039322 312 IRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGG 352 (708)
Q Consensus 312 l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 352 (708)
+++|+.|+|++|.+++.++.... +.++.+.+++|....-.
T Consensus 503 l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~ 542 (844)
T 3j0a_A 503 LTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPN 542 (844)
T ss_dssp CCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCC
T ss_pred hhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCC
Confidence 99999999999999987765443 67888888888765543
No 244
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=7.4e-39 Score=338.35 Aligned_cols=269 Identities=19% Similarity=0.195 Sum_probs=189.0
Q ss_pred HHHHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee
Q 039322 429 DEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH 507 (708)
Q Consensus 429 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~ 507 (708)
.+.....++|++.+.||+|+||.||+|.. .+|+.||||++.... .....+.++++.++.++||||+++++++..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-----TCCCHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-----cccHHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 44566778999999999999999999976 468999999986532 122345677888889999999999999966
Q ss_pred CCe-------eEEEEEeccCCCHHHHhcc-cccccCCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEEccCCCCCeeeCC
Q 039322 508 ARH-------SFLVYELLERGSLAAILSS-DTAAQELGWSQRMNVIKGVADALSYLH--HDCFPPIVHQDISSKNLLLDL 577 (708)
Q Consensus 508 ~~~-------~~lv~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~Lh--~~~~~~ivH~dlk~~Nill~~ 577 (708)
.+. .++||||+++ ++.+.+.. ......+++..++.++.|++.|++||| ++ ||+||||||+||+++.
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNE 166 (360)
T ss_dssp ECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEET
T ss_pred cccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeC
Confidence 433 7899999987 55444432 223345889999999999999999999 87 9999999999999997
Q ss_pred -CCcEEEeecccccccCCCCCccccccccccccCccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccccccc-
Q 039322 578 -EYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLN- 654 (708)
Q Consensus 578 -~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~- 654 (708)
++.+||+|||++....... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||............
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 245 (360)
T 3e3p_A 167 ADGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245 (360)
T ss_dssp TTTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CCCcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHH
Confidence 8999999999998765433 234457899999999986654 899999999999999999999999753221000000
Q ss_pred ------ccccccc---------ccCCCCCCC----CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 ------TDIALDE---------ILDPRLPPP----SRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 ------~~~~~~~---------~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....... ..+....+. ..........+.+++.+||+.||++|||++|+++|-+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 317 (360)
T 3e3p_A 246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY 317 (360)
T ss_dssp HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGG
T ss_pred HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcc
Confidence 0000000 000000000 0000012446889999999999999999999998865
No 245
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.2e-38 Score=335.88 Aligned_cols=262 Identities=24% Similarity=0.336 Sum_probs=199.7
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC-----
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA----- 508 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 508 (708)
.++|++.+.||+|+||.||+|... +|+.||||++... ........+.+|++++++++||||+++++++..+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc---ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 478999999999999999999764 6899999999652 2234466788999999999999999999998664
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
...++||||+. |+|.+++... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 67899999997 5999998653 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc----------cccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc-----
Q 039322 589 AKFLKPESSN----------WTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS----- 652 (708)
Q Consensus 589 a~~~~~~~~~----------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~----- 652 (708)
+......... .....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||..........
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 9876532211 123468999999998754 678999999999999999999999997533110000
Q ss_pred -----------cccccccccccC--CCCCCCC--chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 653 -----------LNTDIALDEILD--PRLPPPS--RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 653 -----------~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
........+... +..+... .........+.+++.+||+.||++|||++|+++|-+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 000000000000 0000000 001122346789999999999999999999998755
No 246
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=347.02 Aligned_cols=262 Identities=19% Similarity=0.267 Sum_probs=183.7
Q ss_pred hccccc-cceeccccCccEEEEEeC---CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee--C
Q 039322 435 TNDFDA-QYCIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH--A 508 (708)
Q Consensus 435 ~~~~~~-~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~--~ 508 (708)
.+.|++ .++||+|+||.||+|... +++.||||++.... ....+.+|++++++++||||+++++++.. +
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 92 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHAD 92 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTT
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCC
Confidence 355766 457999999999999864 57889999997532 13457889999999999999999999954 6
Q ss_pred CeeEEEEEeccCCCHHHHhcccc------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee----CCC
Q 039322 509 RHSFLVYELLERGSLAAILSSDT------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL----DLE 578 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~ 578 (708)
...++||||+.+ +|.+++.... ....+++..++.++.||+.||+|||++ ||+||||||+|||+ +.+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 168 (405)
T 3rgf_A 93 RKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPER 168 (405)
T ss_dssp TEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTT
T ss_pred CeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCC
Confidence 789999999975 8888875432 122489999999999999999999999 99999999999999 677
Q ss_pred CcEEEeecccccccCCCC---CccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccc-cc
Q 039322 579 YEAHVADFGIAKFLKPES---SNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSS-SL 653 (708)
Q Consensus 579 ~~~kl~Dfg~a~~~~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~-~~ 653 (708)
+.+||+|||+|+...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||......... ..
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~ 248 (405)
T 3rgf_A 169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248 (405)
T ss_dssp TCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CC
T ss_pred CcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccccccccc
Confidence 899999999998765332 123446789999999998874 4899999999999999999999999643211000 00
Q ss_pred ccccccccc----------------------------cCCCCCCCCchhHH--------HHHHHHHHHHhccCCCCCCCC
Q 039322 654 NTDIALDEI----------------------------LDPRLPPPSRSVQE--------KLISIMEVAFSCLNESPESRP 697 (708)
Q Consensus 654 ~~~~~~~~~----------------------------~~~~~~~~~~~~~~--------~~~~l~~li~~cl~~dP~~RP 697 (708)
.....+..+ ........ .... ....+.+|+.+||+.||++||
T Consensus 249 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ 326 (405)
T 3rgf_A 249 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNC--SLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRI 326 (405)
T ss_dssp CCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTC--CHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSC
T ss_pred chHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcc--hhhhhHhhcCCCCCHHHHHHHHHHccCCcccCC
Confidence 000000000 00000000 0000 023577899999999999999
Q ss_pred CHHHHHHHhhC
Q 039322 698 TMKVVTQQVRI 708 (708)
Q Consensus 698 s~~evl~~l~~ 708 (708)
|++|+++|-++
T Consensus 327 ta~e~L~hp~f 337 (405)
T 3rgf_A 327 TSEQAMQDPYF 337 (405)
T ss_dssp CHHHHHTSGGG
T ss_pred CHHHHhcChhh
Confidence 99999998653
No 247
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.8e-39 Score=340.17 Aligned_cols=262 Identities=21% Similarity=0.223 Sum_probs=194.9
Q ss_pred HHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC---
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA--- 508 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--- 508 (708)
...++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 75 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNRELDIMKVLDHVNIIKLVDYFYTTGDE 75 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHTTCCCTTBCCEEEEEEEC---
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHHHHHHHcCCCCccchhheeeecCcc
Confidence 4557899999999999999999965 5799999999875321 123699999999999999999998543
Q ss_pred -----------------------------------CeeEEEEEeccCCCHHHHhccc-ccccCCCHHHHHHHHHHHHHHH
Q 039322 509 -----------------------------------RHSFLVYELLERGSLAAILSSD-TAAQELGWSQRMNVIKGVADAL 552 (708)
Q Consensus 509 -----------------------------------~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l 552 (708)
...++||||+++ +|.+.+... .....+++..++.++.|++.||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 348899999985 888777542 2234589999999999999999
Q ss_pred HHHHhCCCCCeEEccCCCCCeeeC-CCCcEEEeecccccccCCCCCccccccccccccCccccccC-CCCcchhHHHHHH
Q 039322 553 SYLHHDCFPPIVHQDISSKNLLLD-LEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGV 630 (708)
Q Consensus 553 ~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~ 630 (708)
+|||++ ||+||||||+||+++ .++.+||+|||+|....... ......+|+.|+|||.+.+. .++.++||||+||
T Consensus 155 ~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 155 GFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 999999 999999999999997 68899999999998765433 23445789999999988765 4899999999999
Q ss_pred HHHHHHhCCCCCCccccccccccc-------cc-------cccccccCCCCCCCCc---hhHHHHHHHHHHHHhccCCCC
Q 039322 631 LVLEAIKGKHPRDFLSLISSSSLN-------TD-------IALDEILDPRLPPPSR---SVQEKLISIMEVAFSCLNESP 693 (708)
Q Consensus 631 ~l~elltg~~p~~~~~~~~~~~~~-------~~-------~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP 693 (708)
++|||++|+.||............ .. .......-+....... .....+..+.+++.+||+.||
T Consensus 231 il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 999999999999753321100000 00 0000000011100000 000123357899999999999
Q ss_pred CCCCCHHHHHHHhh
Q 039322 694 ESRPTMKVVTQQVR 707 (708)
Q Consensus 694 ~~RPs~~evl~~l~ 707 (708)
++|||+.|+++|-+
T Consensus 311 ~~R~t~~e~l~hp~ 324 (383)
T 3eb0_A 311 DLRINPYEAMAHPF 324 (383)
T ss_dssp GGSCCHHHHHTSGG
T ss_pred hhCCCHHHHhcCHH
Confidence 99999999998754
No 248
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.2e-37 Score=355.00 Aligned_cols=352 Identities=21% Similarity=0.159 Sum_probs=289.7
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
+++++|||++|+|+++.+.+|.++++|++|+|++|+|+++.+.+|.. ++|+.|+|++|.+++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999999999999999999999999999888888875 89999999999999988888999999999999
Q ss_pred cCCccccccCccCcCCCCCcEEEccCCccccc-cccccCCCCCCCEEEcccCcceeeCCCCCCCC---------------
Q 039322 81 SENHFQGTIPKILRNCSSLIRVRLNSNNLTGN-ISEALGIYPNLTFIDLSRNDFYGEISSNWGKC--------------- 144 (708)
Q Consensus 81 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l--------------- 144 (708)
++|++++..+..|+++++|++|+|++|.++.+ .+..+..+++|++|++++|+++++.+..|..+
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 99999988788899999999999999999865 46778899999999999998876554332211
Q ss_pred --------------------------------------------------------------------------------
Q 039322 145 -------------------------------------------------------------------------------- 144 (708)
Q Consensus 145 -------------------------------------------------------------------------------- 144 (708)
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence
Q ss_pred ------------------------------------CCCCEEEcccCcccccCCc-------------------cccCCC
Q 039322 145 ------------------------------------PKLGTLNVSMNNITGGIPR-------------------EIGNSS 169 (708)
Q Consensus 145 ------------------------------------~~L~~L~L~~N~i~~~~~~-------------------~~~~l~ 169 (708)
..|+.|++.+|.+....+. .+..++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 1233334444333221111 122456
Q ss_pred CCCEEeccccccccc--C-----------------------CcccCCCCCCCEEEccCccccccCC-cccCCCCCCCeEe
Q 039322 170 QLQALDLSLNHIVGE--I-----------------------PKELGKLNSLTELILRGNQFTGRLP-PEIGSLVDLEYLD 223 (708)
Q Consensus 170 ~L~~L~L~~n~l~~~--~-----------------------~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~ 223 (708)
+|+.|++++|.+... . +..+..+++|+.+++.+|......+ ..|..+++++.++
T Consensus 372 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred ccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccc
Confidence 788888888877421 1 2234556777777777766654433 4577888999999
Q ss_pred ccCCcccccCCCCCCccccceeecccCccc-ccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceeccccccc
Q 039322 224 LSANRFNNSVPENLGNLLKLHYLGLSNNQF-VLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLS 302 (708)
Q Consensus 224 l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l-~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 302 (708)
++.|.+.+..+..+..+++|+.|++++|.+ ....|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 999999988888999999999999999975 4457888999999999999999999888999999999999999999999
Q ss_pred CCCCCcccccccccEEecCCCcCCCCCCCc-ccc-ccCcccccccccCcCCCC
Q 039322 303 GSIPNCFEGIRGISVIDISDNQLQGPVPNS-TAF-RNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 303 ~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~-~~~~~~~~~~n~~~c~~~ 353 (708)
+..+..|..+++|+.||+++|++++..|.. ..+ ..++.+.+++|||.|+|.
T Consensus 532 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 532 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp BCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999999999999999999988764 334 578999999999999985
No 249
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.7e-38 Score=330.85 Aligned_cols=267 Identities=21% Similarity=0.323 Sum_probs=200.4
Q ss_pred HHhccccccceeccccCccEEEEEe--CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc---cCCceeeEEEEEe-
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAEL--PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI---RHRNIVKFYGFCS- 506 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~iv~l~~~~~- 506 (708)
.+.++|++.+.||+|+||.||+|.. .+|+.||+|+++...... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~ 85 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--cCCchhhHHHHHHHhhhccCCCCeEeeeeeeee
Confidence 3458899999999999999999976 468899999986422111 1123456677777666 8999999999987
Q ss_pred ----eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEE
Q 039322 507 ----HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAH 582 (708)
Q Consensus 507 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 582 (708)
.....++||||+. |+|.+++..... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 86 SRTDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp EECSSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEE
Confidence 4567899999998 599999976442 3489999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccc----------
Q 039322 583 VADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSS---------- 652 (708)
Q Consensus 583 l~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~---------- 652 (708)
|+|||++...... .......++..|+|||++.+..++.++||||||+++|+|++|+.||..........
T Consensus 161 l~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (326)
T 1blx_A 161 LADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239 (326)
T ss_dssp ECSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred EecCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 9999999865422 22344678999999999999899999999999999999999999997432110000
Q ss_pred ---cccccc-cccccC-CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 653 ---LNTDIA-LDEILD-PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 653 ---~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...... ...... ....+...........+.+++.+||+.||++|||++|+++|-+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 299 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 000000 000000 0000000111122345789999999999999999999998743
No 250
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.9e-39 Score=334.83 Aligned_cols=258 Identities=22% Similarity=0.372 Sum_probs=199.7
Q ss_pred HhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHH-HHhccCCceeeEEEEEeeCCee
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKA-LTEIRHRNIVKFYGFCSHARHS 511 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~~iv~l~~~~~~~~~~ 511 (708)
..++|++.+.||+|+||.||+|.. .+|+.||||+++..... ....++..|..+ ++.++||||+++++++..++..
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 125 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC---HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc---HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence 347899999999999999999975 57899999999764321 234455556655 7788999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 512 FLVYELLERGSLAAILSSDT-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 512 ~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
++||||+++ +|.+++.... ....+++..++.++.|++.||+|||++. ||+||||||+||+++.++.+||+|||++.
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 999999986 9999886421 2346899999999999999999999742 89999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccCccccc----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 039322 591 FLKPESSNWTEFAGTYGYVAPELAY----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 591 ~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
..... .......|++.|+|||++. ...++.++||||||+++|||++|+.||+..... ...........
T Consensus 203 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-------~~~~~~~~~~~ 274 (340)
T 3an0_A 203 YLVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEP 274 (340)
T ss_dssp HHSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSC
T ss_pred ecccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-------HHHHHHHhcCC
Confidence 66432 1223357899999999964 346889999999999999999999999742110 01111111111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.+... .......+.+++.+||+.||++|||++|++++-+
T Consensus 275 ~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 313 (340)
T 3an0_A 275 SPQLP--ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313 (340)
T ss_dssp CCCCC--GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred CCCCC--cccCCHHHHHHHHHHccCCcccCcCHHHHhcCcC
Confidence 11111 1112345889999999999999999999998754
No 251
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.9e-38 Score=341.16 Aligned_cols=254 Identities=23% Similarity=0.339 Sum_probs=188.6
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv 514 (708)
+.|...+.||+|+||+||.+...+|+.||||++.. ...+.+.+|+++++++ +||||+++++++.+++..++|
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~-------~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv 87 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIA 87 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEG-------GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcH-------HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEE
Confidence 44566788999999999877666899999999864 1245678899999887 899999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccC----CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC------------
Q 039322 515 YELLERGSLAAILSSDTAAQE----LGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE------------ 578 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~----l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~------------ 578 (708)
|||+. |+|.+++........ .++..++.++.||+.||+|||++ ||+||||||+||+++.+
T Consensus 88 ~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~ 163 (434)
T 2rio_A 88 LELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAE 163 (434)
T ss_dssp ECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCC
T ss_pred EecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCC
Confidence 99996 699999976542111 13334678999999999999999 99999999999999754
Q ss_pred -CcEEEeecccccccCCCCCc----cccccccccccCcccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 039322 579 -YEAHVADFGIAKFLKPESSN----WTEFAGTYGYVAPELAYT-------MKITEKCDVYSFGVLVLEAIK-GKHPRDFL 645 (708)
Q Consensus 579 -~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslG~~l~ellt-g~~p~~~~ 645 (708)
+.+||+|||++......... .....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||...
T Consensus 164 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp SCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred ceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 48999999999877544322 234579999999999865 568899999999999999999 99998632
Q ss_pred ccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 646 SLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.... ............. ...........+.+++.+||+.||++|||+.|+++|-+
T Consensus 244 ~~~~------~~i~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~ 298 (434)
T 2rio_A 244 YSRE------SNIIRGIFSLDEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298 (434)
T ss_dssp TTHH------HHHHHTCCCCCCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred hhhH------HHHhcCCCCcccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCc
Confidence 2110 0111111111100 11112344567889999999999999999999998754
No 252
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.6e-38 Score=335.83 Aligned_cols=336 Identities=20% Similarity=0.185 Sum_probs=271.1
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEe
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFG 79 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 79 (708)
++++++|++++|.++.+.+..|..+++|++|+|++|.+.+..+..+.. ++|+.|++++|.+.+..+..+..+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 467889999999999888888889999999999999998877777765 7899999999998888888888889999999
Q ss_pred ccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccc
Q 039322 80 VSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITG 159 (708)
Q Consensus 80 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 159 (708)
+++|.++...+..|.++++|++|++++|.++++.+..|..+++|++|++++|+++.+ .+..+++|+.|++++|.++.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 999999866556678889999999999999888888888899999999999988765 35677889999999988874
Q ss_pred cCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCc
Q 039322 160 GIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGN 239 (708)
Q Consensus 160 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~ 239 (708)
. ...++|++|++++|.+... +. ...++|+.|++++|.+++. ..+..+++|++|+|++|.+++..|..|..
T Consensus 201 ~-----~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (390)
T 3o6n_A 201 L-----AIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVK 270 (390)
T ss_dssp E-----ECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred c-----CCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccc
Confidence 3 3446789999999988844 32 2347899999999998853 56888889999999999998887888888
Q ss_pred cccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEe
Q 039322 240 LLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVID 319 (708)
Q Consensus 240 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~ 319 (708)
+++|+.|+|++|++++ .+..+..+++|+.|++++|+++ ..|..+..+++|+.|++++|+++... +..+++|+.|+
T Consensus 271 l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~ 345 (390)
T 3o6n_A 271 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLT 345 (390)
T ss_dssp CSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEE
T ss_pred cccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEE
Confidence 8999999999999885 4555677888999999999888 55666778889999999999988542 66778889999
Q ss_pred cCCCcCCCCCCCccccccCcccccccccCcCCCCCC
Q 039322 320 ISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGGVKG 355 (708)
Q Consensus 320 l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 355 (708)
+++|++.+... ...+.......+.+++..|.++..
T Consensus 346 l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~c~~~~~ 380 (390)
T 3o6n_A 346 LSHNDWDCNSL-RALFRNVARPAVDDADQHCKIDYQ 380 (390)
T ss_dssp CCSSCEEHHHH-HHHTTTCCTTTBCCCCSCCCTTCE
T ss_pred cCCCCccchhH-HHHHHHHHhhcccccCceeccccc
Confidence 99998887432 233455566667788888877543
No 253
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.7e-38 Score=336.30 Aligned_cols=259 Identities=21% Similarity=0.301 Sum_probs=197.3
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCee--
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHS-- 511 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~-- 511 (708)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc--cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence 36899999999999999999965 468999999997643 2234467889999999999999999999999877654
Q ss_pred ----EEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 512 ----FLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 512 ----~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
++||||+. ++|.+++. ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999997 58888873 2389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-------ccc---
Q 039322 588 IAKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-------NTD--- 656 (708)
Q Consensus 588 ~a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-------~~~--- 656 (708)
+++..... .....+|+.|+|||++.+ ..++.++||||+|+++|+|++|+.||........... ...
T Consensus 190 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 190 LARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp CC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHH
Confidence 99865432 334578999999999877 6789999999999999999999999974321100000 000
Q ss_pred -----c----ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 657 -----I----ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 657 -----~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
. .......................+.+++.+||+.||++|||++|+++|-+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 0 00000000000000000112346889999999999999999999998854
No 254
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.5e-38 Score=342.42 Aligned_cols=256 Identities=19% Similarity=0.291 Sum_probs=201.2
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC-CceeeEEEEEeeCCeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH-RNIVKFYGFCSHARHSF 512 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~l~~~~~~~~~~~ 512 (708)
.++|++.+.||+|+||.||+|.. .+++.||||++..... ..++..|+++++.++| +++..+..++...+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS------SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 47899999999999999999975 5789999998765322 2347789999999976 66777777778888999
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee---CCCCcEEEeecccc
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL---DLEYEAHVADFGIA 589 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a 589 (708)
+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 80 lvme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (483)
T ss_dssp EEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence 999999 899999997433 4589999999999999999999999 99999999999999 58899999999999
Q ss_pred cccCCCCCc-------cccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 039322 590 KFLKPESSN-------WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEI 662 (708)
Q Consensus 590 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 662 (708)
+.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-----~~~~~~i 228 (483)
T 3sv0_A 154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-----KQKYEKI 228 (483)
T ss_dssp EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-----HHHHHHH
T ss_pred eeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-----HHHHHHH
Confidence 876544322 1256789999999999999999999999999999999999999975322110 0001111
Q ss_pred cCCCCCCCC-chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 663 LDPRLPPPS-RSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 663 ~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
......... ......+.++.+++.+||+.||++||++++|++.|+
T Consensus 229 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 229 SEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp HHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred hhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 000000000 000112346889999999999999999999998875
No 255
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=332.74 Aligned_cols=254 Identities=22% Similarity=0.318 Sum_probs=196.3
Q ss_pred HhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
..++|++.+.||+|+||.||+|.... .||+|+++.... .....+.+.+|++++++++||||+++++++.+++..++
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERD--NEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSC--CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCC--CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 34789999999999999999998753 499999875322 11233457789999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
||||+++++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++ ++.+||+|||++....
T Consensus 107 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp ECBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred EeecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 999999999999997543 4588999999999999999999999 999999999999998 6899999999987543
Q ss_pred CC-----CCccccccccccccCcccccc---------CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 039322 594 PE-----SSNWTEFAGTYGYVAPELAYT---------MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIAL 659 (708)
Q Consensus 594 ~~-----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 659 (708)
.. ........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ...
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~ 252 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--------AII 252 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--------HHH
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHH
Confidence 21 122234568999999998864 34788999999999999999999999743211 111
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 660 DEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.....+.... ...+..+.+++.+||+.||++|||++++++.|+
T Consensus 253 ~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 253 WQMGTGMKPNLSQ--IGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp HHHHTTCCCCCCC--SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred HHhccCCCCCCCc--CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1111111110000 011224788999999999999999999999885
No 256
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.6e-38 Score=356.04 Aligned_cols=255 Identities=22% Similarity=0.340 Sum_probs=201.0
Q ss_pred HHhccccccceeccccCccEEEEEeC----CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA 508 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~ 508 (708)
...++|++.+.||+|+||.||+|... .+..||+|.++... .....+.+.+|+.++++++||||+++++++. +
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 34577899999999999999999763 24679999987532 2344578999999999999999999999985 4
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCC
Confidence 56899999999999999997543 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc-cccccccccccCccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC
Q 039322 589 AKFLKPESSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDEILDPR 666 (708)
Q Consensus 589 a~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (708)
++........ .....+++.|+|||++.+..++.++||||||+++|||++ |..||...... .....+....
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--------~~~~~i~~~~ 609 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGRIENGE 609 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHHTC
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHcCC
Confidence 9876543222 233456789999999998899999999999999999997 99998743221 1111111111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 667 LPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 667 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
..+.+. ..+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 610 ~~~~~~---~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 610 RLPMPP---NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCc---cccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111111 12235888999999999999999999999874
No 257
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.5e-38 Score=351.13 Aligned_cols=322 Identities=20% Similarity=0.238 Sum_probs=268.4
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCC-CCccccCCCCccEEe
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSY-LPHNVCRGGALQYFG 79 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~-~~~~~~~l~~L~~L~ 79 (708)
+++|++|+|++|+|+++.|+.|.++++|++|+|++|+|+. +|.. ..++|+.|++++|.+.+. .|..+..+++|++|+
T Consensus 75 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~-~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~ 152 (562)
T 3a79_B 75 LSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC-PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLG 152 (562)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC-CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEE
T ss_pred CCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc-ccccCCEEECCCCCccccCchHhhcccCcccEEe
Confidence 5789999999999999999999999999999999999985 4444 668999999999999985 468999999999999
Q ss_pred ccCCccccccCccCcCCCCC--cEEEccCCcc--ccccccccCCCC----------------------------------
Q 039322 80 VSENHFQGTIPKILRNCSSL--IRVRLNSNNL--TGNISEALGIYP---------------------------------- 121 (708)
Q Consensus 80 l~~n~i~~~~~~~~~~l~~L--~~L~l~~n~i--~~~~~~~~~~~~---------------------------------- 121 (708)
+++|.+++. .+..+++| ++|++++|.+ ++..+..|..+.
T Consensus 153 L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 229 (562)
T 3a79_B 153 LSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIK 229 (562)
T ss_dssp EECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEE
T ss_pred cCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEeccc
Confidence 999999863 45666666 9999999998 655555554432
Q ss_pred -----------------------------------------------CCCEEEcccCcceeeCCCCC-----CCC-----
Q 039322 122 -----------------------------------------------NLTFIDLSRNDFYGEISSNW-----GKC----- 144 (708)
Q Consensus 122 -----------------------------------------------~L~~L~l~~n~l~~~~~~~~-----~~l----- 144 (708)
+|++|++++|.+++..+..+ ..+
T Consensus 230 ~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~ 309 (562)
T 3a79_B 230 LNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMI 309 (562)
T ss_dssp CCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEE
T ss_pred ccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheeh
Confidence 67788888888875555544 222
Q ss_pred ---------------------CCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCc
Q 039322 145 ---------------------PKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGN 203 (708)
Q Consensus 145 ---------------------~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 203 (708)
.+|+.|++++|.+.... .+..+++|++|++++|++++..|..+.++++|++|+|++|
T Consensus 310 ~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 387 (562)
T 3a79_B 310 EHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRN 387 (562)
T ss_dssp EEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSS
T ss_pred hhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCC
Confidence 34777778888775322 2268899999999999999888999999999999999999
Q ss_pred cccccC--CcccCCCCCCCeEeccCCcccccCC-CCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCC
Q 039322 204 QFTGRL--PPEIGSLVDLEYLDLSANRFNNSVP-ENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGE 280 (708)
Q Consensus 204 ~l~~~~--~~~~~~~~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~ 280 (708)
++++.. |..+..+++|++|++++|++++..| ..+..+++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .
T Consensus 388 ~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ 464 (562)
T 3a79_B 388 GLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-S 464 (562)
T ss_dssp CCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-C
T ss_pred CcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-c
Confidence 999633 4578999999999999999997444 5688999999999999999876655443 69999999999999 6
Q ss_pred CchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCCc
Q 039322 281 IPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNS 332 (708)
Q Consensus 281 ~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 332 (708)
+|..+..+++|+.|++++|++++..+..+..+++|+.|++++|++.|.++..
T Consensus 465 ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 465 IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 6666669999999999999999655555999999999999999999987654
No 258
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.9e-38 Score=331.96 Aligned_cols=200 Identities=24% Similarity=0.297 Sum_probs=170.5
Q ss_pred HhccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CC-----ceeeEEEEEe
Q 039322 434 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HR-----NIVKFYGFCS 506 (708)
Q Consensus 434 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----~iv~l~~~~~ 506 (708)
..++|++.+.||+|+||.||+|... +++.||||+++.. .....++..|+++++.++ |+ +|+++++++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 3578999999999999999999654 6889999999742 234566788888888885 44 4999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC--CCCcEEEe
Q 039322 507 HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD--LEYEAHVA 584 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~--~~~~~kl~ 584 (708)
..+..++||||+. |+|.+++..... ..+++..++.++.|++.||+|||++ ..||+||||||+||+++ .++.+||+
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred cCCceEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 9999999999996 499999976542 3489999999999999999999952 12999999999999995 46789999
Q ss_pred ecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 039322 585 DFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDF 644 (708)
Q Consensus 585 Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~ 644 (708)
|||+++..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 204 DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 204 DFGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp CCTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999876432 2346789999999999999999999999999999999999999974
No 259
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.4e-38 Score=352.22 Aligned_cols=264 Identities=25% Similarity=0.308 Sum_probs=202.6
Q ss_pred hccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee------
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH------ 507 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------ 507 (708)
.++|++.+.||+|+||.||+|.. .+|+.||||+++... .....+.+.+|++++++++||||+++++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC---CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 37899999999999999999965 468999999987632 23456789999999999999999999999765
Q ss_pred CCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc---EEEe
Q 039322 508 ARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYE---AHVA 584 (708)
Q Consensus 508 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~kl~ 584 (708)
++..++||||+++|+|.+++........+++..++.++.|++.||+|||+. ||+||||||+||+++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 677899999999999999998766555689999999999999999999999 9999999999999997765 9999
Q ss_pred ecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-cc-----------c
Q 039322 585 DFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLIS-SS-----------S 652 (708)
Q Consensus 585 Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~-~~-----------~ 652 (708)
|||++....... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||....... .. .
T Consensus 167 DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~ 245 (676)
T 3qa8_A 167 DLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV 245 (676)
T ss_dssp SCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CC
T ss_pred cccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhh
Confidence 999998765433 3345678999999999999999999999999999999999999996421100 00 0
Q ss_pred cccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 653 LNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
...............+.+..........+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~h 298 (676)
T 3qa8_A 246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNV 298 (676)
T ss_dssp SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCC
T ss_pred hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcC
Confidence 00000000011111222222233345678899999999999999999886654
No 260
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.3e-38 Score=340.39 Aligned_cols=259 Identities=25% Similarity=0.251 Sum_probs=193.2
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeC------
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHA------ 508 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~------ 508 (708)
.+|+..+.||+|+||.||+|... +|+.||||++..... .+.+|++++++++||||+++++++...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 57999999999999999999764 689999999865321 123699999999999999999998542
Q ss_pred CeeEEEEEeccCCCHHHHhccc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEeec
Q 039322 509 RHSFLVYELLERGSLAAILSSD-TAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-YEAHVADF 586 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Df 586 (708)
...++||||+++ ++.+.+... .....+++..++.++.||++||+|||++ ||+||||||+|||++.+ +.+||+||
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DF 201 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccc
Confidence 236799999986 666665432 2235689999999999999999999999 99999999999999965 56899999
Q ss_pred ccccccCCCCCccccccccccccCccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-------ccccc
Q 039322 587 GIAKFLKPESSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-------NTDIA 658 (708)
Q Consensus 587 g~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-------~~~~~ 658 (708)
|+++...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||........... .....
T Consensus 202 G~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 202 GSAKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280 (420)
T ss_dssp TTCEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred hhhhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9998765432 23445789999999998765 689999999999999999999999975332110000 00000
Q ss_pred -------cccccCCCCCCCCc---hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 659 -------LDEILDPRLPPPSR---SVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 659 -------~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+....... ........+.+|+.+||+.||++|||+.|+++|-+
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~ 339 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence 00111111111000 00011346889999999999999999999998754
No 261
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.3e-38 Score=329.80 Aligned_cols=258 Identities=25% Similarity=0.351 Sum_probs=179.9
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHH-HHHhccCCceeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVK-ALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
++|+..+.||+|+||.||+|.. .+|+.||||+++... ......++..|+. +++.++||||+++++++..++..++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV---DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC---CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc---CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 7899999999999999999976 478999999997642 2233445566666 6777899999999999999999999
Q ss_pred EEEeccCCCHHHHhcccc--cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 514 VYELLERGSLAAILSSDT--AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
||||+++ +|.+++.... ....+++..+..++.|++.||+|||+.. |++||||||+||+++.++.+||+|||++..
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999986 8888775311 1345899999999999999999999953 899999999999999999999999999986
Q ss_pred cCCCCCccccccccccccCcccc----ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 592 LKPESSNWTEFAGTYGYVAPELA----YTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 592 ~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
..... ......|++.|+|||++ .+..++.++||||||+++|+|++|+.||...... ............
T Consensus 176 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (327)
T 3aln_A 176 LVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-------FDQLTQVVKGDP 247 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCC
T ss_pred ccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-------HHHHHHHhcCCC
Confidence 64332 22344789999999998 4566889999999999999999999999742211 011111111111
Q ss_pred CC-CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PP-PSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+. ...........+.+++.+||+.||++|||++|++++-+
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 288 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPF 288 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChH
Confidence 10 00001112335889999999999999999999988754
No 262
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=339.29 Aligned_cols=251 Identities=21% Similarity=0.295 Sum_probs=188.0
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~l 513 (708)
..+|...+.||+|+||+||.....+|+.||||++.... ...+.+|+++++++ +||||+++++++.+++..++
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~-------~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l 95 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC-------FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYI 95 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT-------EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH-------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEE
Confidence 35799999999999999766655679999999987532 12245799999999 79999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-----CcEEEeeccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLE-----YEAHVADFGI 588 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-----~~~kl~Dfg~ 588 (708)
||||+. |+|.+++.... ....+..++.++.|++.||+|||++ +|+||||||+||+++.+ ..+||+|||+
T Consensus 96 v~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 96 AIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp EEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred EEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 999996 59999997654 2244456789999999999999999 99999999999999532 3588999999
Q ss_pred ccccCCCCC---ccccccccccccCccccc---cCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccccccc
Q 039322 589 AKFLKPESS---NWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLVLEAIK-GKHPRDFLSLISSSSLNTDIALDE 661 (708)
Q Consensus 589 a~~~~~~~~---~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 661 (708)
|........ ......||+.|+|||++. ...++.++||||+||++|||++ |..||...... ....
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---------~~~~ 240 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---------QANI 240 (432)
T ss_dssp EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---------HHHH
T ss_pred eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---------HHHH
Confidence 987654321 234467999999999987 4567789999999999999999 99998532110 0011
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 662 ILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...................+.+++.+||+.||++|||++|+++|-+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~ 286 (432)
T 3p23_A 241 LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286 (432)
T ss_dssp HTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTT
T ss_pred HhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCcc
Confidence 1111100111111223345778999999999999999999998754
No 263
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.5e-38 Score=359.95 Aligned_cols=340 Identities=22% Similarity=0.270 Sum_probs=292.2
Q ss_pred CCCCcEEECCCCcccc-----------------cCCcccc--CCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCC
Q 039322 1 MRSLSILDLNQNQFKG-----------------VLPPSVS--NLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNH 60 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~-----------------~~~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~ 60 (708)
|++|++|+|++|+|++ ..|..++ ++++|++|+|++|.+.+.+|..+.. ++|+.|++++|.
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 5799999999999998 2788877 9999999999999999999988765 899999999998
Q ss_pred -ccC-CCCccccCC-------CCccEEeccCCccccccCc--cCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcc
Q 039322 61 -FTS-YLPHNVCRG-------GALQYFGVSENHFQGTIPK--ILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLS 129 (708)
Q Consensus 61 -~~~-~~~~~~~~l-------~~L~~L~l~~n~i~~~~~~--~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~ 129 (708)
+++ .+|..+..+ ++|++|+|++|+++ .+|. .|.++++|++|+|++|+++.++ .|..+++|++|+|+
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp--~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLE--AFGTNVKLTDLKLD 603 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCC--CCCTTSEESEEECC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccch--hhcCCCcceEEECc
Confidence 877 677766555 49999999999999 7888 8999999999999999999544 89999999999999
Q ss_pred cCcceeeCCCCCCCCCC-CCEEEcccCcccccCCccccCCCC--CCEEecccccccccCCcc---cC--CCCCCCEEEcc
Q 039322 130 RNDFYGEISSNWGKCPK-LGTLNVSMNNITGGIPREIGNSSQ--LQALDLSLNHIVGEIPKE---LG--KLNSLTELILR 201 (708)
Q Consensus 130 ~n~l~~~~~~~~~~l~~-L~~L~L~~N~i~~~~~~~~~~l~~--L~~L~L~~n~l~~~~~~~---~~--~l~~L~~L~l~ 201 (708)
+|+++ ..+..+..+++ |+.|+|++|.|+ .+|..+..++. |+.|+|++|++.+.+|.. +. .+++|+.|+|+
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls 681 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLS 681 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECC
T ss_pred CCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEcc
Confidence 99999 56667899999 999999999999 67788877754 999999999998765532 22 34689999999
Q ss_pred CccccccCCcc-cCCCCCCCeEeccCCcccccCCCCC-C-------ccccceeecccCcccccCCChhhh--hhcccchh
Q 039322 202 GNQFTGRLPPE-IGSLVDLEYLDLSANRFNNSVPENL-G-------NLLKLHYLGLSNNQFVLELPKELE--KLVQLSEL 270 (708)
Q Consensus 202 ~n~l~~~~~~~-~~~~~~L~~L~l~~N~i~~~~~~~~-~-------~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L 270 (708)
+|.++ .+|.. +..+++|+.|+|++|+|+ .+|..+ . ++++|+.|+|++|+|+ .+|..+. .+++|+.|
T Consensus 682 ~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L 758 (876)
T 4ecn_A 682 YNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNM 758 (876)
T ss_dssp SSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEE
T ss_pred CCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEE
Confidence 99999 45554 458899999999999999 455443 3 2349999999999999 6777776 89999999
Q ss_pred hcccccCCCCCchhhcCcccCCceeccc------ccccCCCCCcccccccccEEecCCCcCCCCCCCccccccCcccccc
Q 039322 271 DASHNLFGGEIPFQICSLKSLEKLNLSH------NNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALK 344 (708)
Q Consensus 271 ~ls~N~i~~~~~~~~~~~~~L~~L~l~~------N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~ 344 (708)
+|++|.|++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|++++|++ +.+|.. ..+.++.+.++
T Consensus 759 ~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs 835 (876)
T 4ecn_A 759 DVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIA 835 (876)
T ss_dssp ECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECC
T ss_pred EeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECC
Confidence 999999996 688889999999999976 888889999999999999999999999 555553 23688999999
Q ss_pred cccCcCC
Q 039322 345 GNKGLCG 351 (708)
Q Consensus 345 ~n~~~c~ 351 (708)
+|++..-
T Consensus 836 ~N~l~~i 842 (876)
T 4ecn_A 836 DNPNISI 842 (876)
T ss_dssp SCTTCEE
T ss_pred CCCCCcc
Confidence 9987553
No 264
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.6e-38 Score=329.59 Aligned_cols=249 Identities=22% Similarity=0.336 Sum_probs=200.8
Q ss_pred HHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcc--hhHhHHHHHHHHHHHHhcc--CCceeeEEEEEee
Q 039322 433 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCD--QIADQKEFLIEVKALTEIR--HRNIVKFYGFCSH 507 (708)
Q Consensus 433 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~--h~~iv~l~~~~~~ 507 (708)
...++|++.+.||+|+||.||+|.. .+++.||||.+....... .......+.+|+.++++++ |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3457899999999999999999964 578999999987532111 0112345677999999996 5999999999999
Q ss_pred CCeeEEEEEeccC-CCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-CCCcEEEee
Q 039322 508 ARHSFLVYELLER-GSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD-LEYEAHVAD 585 (708)
Q Consensus 508 ~~~~~lv~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~kl~D 585 (708)
++..++|+|++.+ ++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++ .++.+||+|
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEee
Confidence 9999999999986 8999999653 3489999999999999999999999 999999999999999 789999999
Q ss_pred cccccccCCCCCccccccccccccCccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILD 664 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 664 (708)
||++...... ......|++.|+|||++.+..+ +.++||||||+++|||++|+.||+...... .
T Consensus 194 fg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----------~---- 257 (320)
T 3a99_A 194 FGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII----------R---- 257 (320)
T ss_dssp CTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----------H----
T ss_pred Cccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh----------c----
Confidence 9999876532 2344578999999999887665 678999999999999999999997432110 0
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 665 PRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 665 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
.....+.. .+..+.+++.+||+.||++|||++|++++-+
T Consensus 258 ~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~ 296 (320)
T 3a99_A 258 GQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 296 (320)
T ss_dssp CCCCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred cccccccc----CCHHHHHHHHHHccCChhhCcCHHHHhcCHh
Confidence 00000101 1235789999999999999999999998754
No 265
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=329.58 Aligned_cols=258 Identities=21% Similarity=0.305 Sum_probs=196.3
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe----
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH---- 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~---- 510 (708)
++|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 6899999999999999999965 468999999997643 223446778999999999999999999999987654
Q ss_pred --eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 511 --SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 511 --~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
.++||||+. |+|.+++. ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 58888774 2389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccCcccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-------c------
Q 039322 589 AKFLKPESSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL-------N------ 654 (708)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~-------~------ 654 (708)
+...... .....+++.|+|||++.+ ..++.++||||+|+++|+|++|+.||........... .
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred ccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9865422 234578999999998876 6788999999999999999999999975331100000 0
Q ss_pred --ccc----ccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 655 --TDI----ALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 655 --~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
... .......................+.+++.+||+.||++|||++|+++|-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 308 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 000 00000000000000011122346889999999999999999999998754
No 266
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.9e-37 Score=326.98 Aligned_cols=260 Identities=19% Similarity=0.257 Sum_probs=199.9
Q ss_pred hccccccceeccccCccEEEEEeC-CC-cEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc------eeeEEEEEe
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SG-QVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN------IVKFYGFCS 506 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~l~~~~~ 506 (708)
.++|++.+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 378999999999999999999753 34 68999999752 244667889999999998765 999999999
Q ss_pred eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee-----------
Q 039322 507 HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL----------- 575 (708)
Q Consensus 507 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----------- 575 (708)
..+..++||||+ ++++.+++..... ..+++..++.++.|++.||+|||++ ||+||||||+||++
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred eCCeEEEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 999999999999 5677777755432 4589999999999999999999999 99999999999999
Q ss_pred --------CCCCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 039322 576 --------DLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSL 647 (708)
Q Consensus 576 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~ 647 (708)
+.++.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 56789999999999865432 2345789999999999998999999999999999999999999974321
Q ss_pred ccccc-------ccccccc------ccccCCC--CC-----------------CCCchhHHHHHHHHHHHHhccCCCCCC
Q 039322 648 ISSSS-------LNTDIAL------DEILDPR--LP-----------------PPSRSVQEKLISIMEVAFSCLNESPES 695 (708)
Q Consensus 648 ~~~~~-------~~~~~~~------~~~~~~~--~~-----------------~~~~~~~~~~~~l~~li~~cl~~dP~~ 695 (708)
..... ....... ....... .. ............+.+++.+||+.||++
T Consensus 245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 10000 0000000 0000000 00 000011123446889999999999999
Q ss_pred CCCHHHHHHHhh
Q 039322 696 RPTMKVVTQQVR 707 (708)
Q Consensus 696 RPs~~evl~~l~ 707 (708)
|||++|+++|-+
T Consensus 325 Rpt~~e~l~hp~ 336 (355)
T 2eu9_A 325 RITLAEALLHPF 336 (355)
T ss_dssp SCCHHHHTTSGG
T ss_pred CcCHHHHhcChh
Confidence 999999998754
No 267
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.5e-38 Score=332.86 Aligned_cols=260 Identities=20% Similarity=0.247 Sum_probs=199.1
Q ss_pred ccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-----------CCceeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-----------HRNIVKFYG 503 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~iv~l~~ 503 (708)
++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 6899999999999999999965 57899999998752 234567888999998886 899999999
Q ss_pred EEeeCC----eeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC---
Q 039322 504 FCSHAR----HSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD--- 576 (708)
Q Consensus 504 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~--- 576 (708)
++...+ ..++||||+ +++|.+++..... ..+++..++.++.||+.||+|||+++ ||+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 997654 789999999 8899999976442 34899999999999999999999953 899999999999994
Q ss_pred ---CCCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccccccc
Q 039322 577 ---LEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSL 653 (708)
Q Consensus 577 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~ 653 (708)
..+.+||+|||++...... .....+|+.|+|||++.+..++.++||||||+++|||++|+.||...........
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4458999999999866432 2345789999999999998999999999999999999999999974321100000
Q ss_pred c-----------------------------cccccccccCCCCC-------CCCchhHHHHHHHHHHHHhccCCCCCCCC
Q 039322 654 N-----------------------------TDIALDEILDPRLP-------PPSRSVQEKLISIMEVAFSCLNESPESRP 697 (708)
Q Consensus 654 ~-----------------------------~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~li~~cl~~dP~~RP 697 (708)
. .......+...... ............+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 0 00000000000000 00011234566789999999999999999
Q ss_pred CHHHHHHHhh
Q 039322 698 TMKVVTQQVR 707 (708)
Q Consensus 698 s~~evl~~l~ 707 (708)
|++|+++|-+
T Consensus 327 t~~ell~hp~ 336 (373)
T 1q8y_A 327 DAGGLVNHPW 336 (373)
T ss_dssp CHHHHHTCGG
T ss_pred CHHHHhhChh
Confidence 9999998755
No 268
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.6e-36 Score=346.55 Aligned_cols=347 Identities=23% Similarity=0.241 Sum_probs=307.9
Q ss_pred CCCcEEECCCCcccccCCccccCCCC--CCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEE
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTN--LKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYF 78 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~--L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L 78 (708)
++|+.|+|++|+++++.+..|.+++. |++|+|++|++.+..+..+.. ++|+.|++++|.+.+..+..+..+++|++|
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (680)
T 1ziw_A 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL 301 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEE
T ss_pred ccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEE
Confidence 57899999999999999999988865 999999999999888888865 899999999999999999999999999999
Q ss_pred eccCCcccc-----ccC----ccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcc--eeeCCCCCCCC--C
Q 039322 79 GVSENHFQG-----TIP----KILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDF--YGEISSNWGKC--P 145 (708)
Q Consensus 79 ~l~~n~i~~-----~~~----~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l--~~~~~~~~~~l--~ 145 (708)
++++|...+ .+| ..|..+++|++|++++|.++++.+..|..+++|++|++++|.+ ..+....|..+ +
T Consensus 302 ~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~ 381 (680)
T 1ziw_A 302 NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHS 381 (680)
T ss_dssp ECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTS
T ss_pred eccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccC
Confidence 999876543 222 3788999999999999999999999999999999999999974 45555566544 5
Q ss_pred CCCEEEcccCcccccCCccccCCCCCCEEecccccccccCC-cccCCCCCCCEEEccCccccccCCcccCCCCCCCeEec
Q 039322 146 KLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIP-KELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDL 224 (708)
Q Consensus 146 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l 224 (708)
+|+.|++++|++++..+..|..+++|++|+|++|++.+.++ ..+.++++|++|++++|++++..+..|..+++|+.|++
T Consensus 382 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l 461 (680)
T 1ziw_A 382 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLML 461 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEEC
T ss_pred cCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchh
Confidence 89999999999999999999999999999999999987555 68999999999999999999888999999999999999
Q ss_pred cCCccc--ccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCc--------hhhcCcccCCce
Q 039322 225 SANRFN--NSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIP--------FQICSLKSLEKL 294 (708)
Q Consensus 225 ~~N~i~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~--------~~~~~~~~L~~L 294 (708)
++|.++ +..|..|..+++|+.|++++|++++..+..|.++++|+.|++++|.+++..+ ..+..+++|+.|
T Consensus 462 ~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L 541 (680)
T 1ziw_A 462 RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHIL 541 (680)
T ss_dssp TTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEE
T ss_pred ccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEE
Confidence 999987 5678889999999999999999998888889999999999999999986422 237889999999
Q ss_pred ecccccccCCCCCcccccccccEEecCCCcCCCCCCCc-cccccCcccccccccC
Q 039322 295 NLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNS-TAFRNAPVEALKGNKG 348 (708)
Q Consensus 295 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~ 348 (708)
+|++|+++.+.+..|.++++|+.|++++|.+++.++.. ..++.++.+.+.+|..
T Consensus 542 ~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l 596 (680)
T 1ziw_A 542 NLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLI 596 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred ECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcC
Confidence 99999999777778999999999999999999877764 4667889999998854
No 269
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=324.48 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=193.4
Q ss_pred HHHHhccccccceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcch--hHhHHHHHHHHHHHHhc----cCCceeeEEE
Q 039322 431 IVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQ--IADQKEFLIEVKALTEI----RHRNIVKFYG 503 (708)
Q Consensus 431 ~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l----~h~~iv~l~~ 503 (708)
.....++|++.+.||+|+||.||+|.. .+++.||||++........ ......+.+|+++++++ +|+||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344467899999999999999999965 4688999999976322111 12234566799999998 8999999999
Q ss_pred EEeeCCeeEEEEEe-ccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-CCCcE
Q 039322 504 FCSHARHSFLVYEL-LERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD-LEYEA 581 (708)
Q Consensus 504 ~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~ 581 (708)
++...+..++|+|+ +.+++|.+++.... .+++..++.++.|++.||+|||++ |++||||||+||+++ .++.+
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 99999999999999 78899999997543 489999999999999999999999 999999999999999 88999
Q ss_pred EEeecccccccCCCCCccccccccccccCccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 039322 582 HVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKIT-EKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALD 660 (708)
Q Consensus 582 kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 660 (708)
||+|||++...... ......|+..|+|||++.+..+. .++||||||+++|||++|+.||+.....
T Consensus 180 kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------ 245 (312)
T 2iwi_A 180 KLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI------------ 245 (312)
T ss_dssp EECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------
T ss_pred EEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH------------
Confidence 99999999876533 23455689999999998877664 4899999999999999999998742211
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 039322 661 EILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVRI 708 (708)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 708 (708)
.......+.. ....+.+++.+||+.||++|||++|++++-++
T Consensus 246 --~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~ 287 (312)
T 2iwi_A 246 --LEAELHFPAH----VSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287 (312)
T ss_dssp --HHTCCCCCTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTT
T ss_pred --hhhccCCccc----CCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 0011111111 12357889999999999999999999997653
No 270
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=8.1e-38 Score=324.42 Aligned_cols=256 Identities=20% Similarity=0.292 Sum_probs=180.9
Q ss_pred hccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFL 513 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 513 (708)
.++|++.+.||+|+||.||+|... +|+.||||++.... ........+.++..+++.++||||+++++++..++..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG--NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTS--CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 478999999999999999999764 78999999997632 122233445555567888899999999999999999999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
||||+ ++.+..+.... ...+++..++.++.|++.||+|||+ . |++||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 99999 44565555432 2458999999999999999999998 5 8999999999999999999999999999765
Q ss_pred CCCCCccccccccccccCccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 039322 593 KPESSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRL 667 (708)
Q Consensus 593 ~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (708)
.... ......+++.|+|||++. ...++.++||||||+++|||++|+.||...... ............
T Consensus 176 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (318)
T 2dyl_A 176 VDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-------FEVLTKVLQEEP 247 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHHHHHHSCC
T ss_pred cCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-------HHHHHHHhccCC
Confidence 4332 234457899999999984 456888999999999999999999998742110 111111111111
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 668 PPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 668 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
+..+ .....+..+.+++.+||+.||++|||++|+++|-+
T Consensus 248 ~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 286 (318)
T 2dyl_A 248 PLLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF 286 (318)
T ss_dssp CCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHH
T ss_pred CCCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHH
Confidence 1000 00012235888999999999999999999998743
No 271
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.4e-37 Score=347.11 Aligned_cols=336 Identities=20% Similarity=0.182 Sum_probs=282.0
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEe
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFG 79 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 79 (708)
+++++.|++++|.++.+.+..|.++++|++|+|++|.|.+..+..+.. ++|+.|++++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 367899999999999888888899999999999999999888877765 7899999999999998888889999999999
Q ss_pred ccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccc
Q 039322 80 VSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITG 159 (708)
Q Consensus 80 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 159 (708)
|++|.+++..+..|.++++|++|+|++|.++++.+..|..+++|++|+|++|.++++. +..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 9999999776677899999999999999999988889999999999999999988653 5677899999999998874
Q ss_pred cCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCc
Q 039322 160 GIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGN 239 (708)
Q Consensus 160 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~ 239 (708)
. ...++|+.|++++|.+....+. + .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..
T Consensus 207 l-----~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 L-----AIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp E-----ECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred c-----cCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 3 4456899999999998844332 2 3689999999999985 367888999999999999999888888999
Q ss_pred cccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEe
Q 039322 240 LLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVID 319 (708)
Q Consensus 240 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~ 319 (708)
+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|++++.. +..+++|+.|+
T Consensus 277 l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~ 351 (597)
T 3oja_B 277 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLT 351 (597)
T ss_dssp CSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEE
T ss_pred ccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEE
Confidence 9999999999999985 4556677889999999999998 56777888999999999999998553 56778999999
Q ss_pred cCCCcCCCCCCCccccccCcccccccccCcCCCCCC
Q 039322 320 ISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGGVKG 355 (708)
Q Consensus 320 l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 355 (708)
+++|++.|... ...+.......+.+++..|+.+..
T Consensus 352 l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~C~~~~~ 386 (597)
T 3oja_B 352 LSHNDWDCNSL-RALFRNVARPAVDDADQHCKIDYQ 386 (597)
T ss_dssp CCSSCEEHHHH-HHHTTTCCTTTBCCCCCCCCTTCE
T ss_pred eeCCCCCChhH-HHHHHHHhhhccccccccCCcchh
Confidence 99999987642 233455566667888888887543
No 272
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.3e-37 Score=354.63 Aligned_cols=338 Identities=19% Similarity=0.230 Sum_probs=254.1
Q ss_pred CCcEEECCCCcccccCCccccCCCCCCEEEe-eCceeeee----------------------------------------
Q 039322 3 SLSILDLNQNQFKGVLPPSVSNLTNLKELVL-LYNNLSGF---------------------------------------- 41 (708)
Q Consensus 3 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L-~~n~i~~~---------------------------------------- 41 (708)
.++.|+|++|++++..|..|++|++|++|+| ++|.+.+.
T Consensus 324 ~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l 403 (876)
T 4ecn_A 324 RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDL 403 (876)
T ss_dssp CEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHH
Confidence 5788999999999889999999999999999 77654333
Q ss_pred ------------------------------------CCCCCCC-CCcccccccCCCccC-----------------CCCc
Q 039322 42 ------------------------------------IPPSLEN-PMLTRPGLDFNHFTS-----------------YLPH 67 (708)
Q Consensus 42 ------------------------------------~~~~~~~-~~l~~l~l~~n~~~~-----------------~~~~ 67 (708)
+|..+.. ++|+.|+|++|.+++ .+|.
T Consensus 404 ~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~ 483 (876)
T 4ecn_A 404 LQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE 483 (876)
T ss_dssp HHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS
T ss_pred HHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCCh
Confidence 4444443 678888888888877 3777
Q ss_pred ccc--CCCCccEEeccCCccccccCccCcCCCCCcEEEccCCc-ccc-cccccc-------CCCCCCCEEEcccCcceee
Q 039322 68 NVC--RGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNN-LTG-NISEAL-------GIYPNLTFIDLSRNDFYGE 136 (708)
Q Consensus 68 ~~~--~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~-i~~-~~~~~~-------~~~~~L~~L~l~~n~l~~~ 136 (708)
.++ .+++|++|+|++|.+.+.+|..|.++++|++|+|++|+ +++ ..|..+ ..+++|++|+|++|+++ .
T Consensus 484 ~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ 562 (876)
T 4ecn_A 484 ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-E 562 (876)
T ss_dssp CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-B
T ss_pred hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-c
Confidence 776 88888888888888887888888888888888888887 776 444433 34458888888888887 4
Q ss_pred CCC--CCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCC-CCEEEccCccccccCCccc
Q 039322 137 ISS--NWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNS-LTELILRGNQFTGRLPPEI 213 (708)
Q Consensus 137 ~~~--~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~ 213 (708)
.|. .|..+++|+.|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |++|+|++|.++ .+|..+
T Consensus 563 ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~ 638 (876)
T 4ecn_A 563 FPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIF 638 (876)
T ss_dssp CCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCC
T ss_pred cCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhh
Confidence 455 6778888888888888887 555 7788888888888888887 67777778877 888888888888 667776
Q ss_pred CCCCC--CCeEeccCCcccccCCCCC---C--ccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhc
Q 039322 214 GSLVD--LEYLDLSANRFNNSVPENL---G--NLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQIC 286 (708)
Q Consensus 214 ~~~~~--L~~L~l~~N~i~~~~~~~~---~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~ 286 (708)
..++. |+.|+|++|++++..|... . .+++|+.|+|++|+++...+..+..+++|+.|+|++|.|+ .+|..+.
T Consensus 639 ~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~ 717 (876)
T 4ecn_A 639 NAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSL 717 (876)
T ss_dssp CTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSS
T ss_pred hccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHh
Confidence 66543 8888888888876555322 2 3447888888888888443344557888888888888888 4444333
Q ss_pred C--------cccCCceecccccccCCCCCccc--ccccccEEecCCCcCCCCCCCccccccCccccccccc
Q 039322 287 S--------LKSLEKLNLSHNNLSGSIPNCFE--GIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNK 347 (708)
Q Consensus 287 ~--------~~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~ 347 (708)
. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++.+.....++.++.+.+++|+
T Consensus 718 ~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~ 787 (876)
T 4ecn_A 718 KPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQR 787 (876)
T ss_dssp SCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCB
T ss_pred ccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCC
Confidence 2 238888888888888 6677766 8888888888888888865556677788888888776
No 273
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.8e-37 Score=338.66 Aligned_cols=321 Identities=21% Similarity=0.243 Sum_probs=269.2
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCC-CCccccCCCCccEEe
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSY-LPHNVCRGGALQYFG 79 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~-~~~~~~~l~~L~~L~ 79 (708)
+++|++|+|++|+|+++.|..|.++++|++|+|++|+|+.+ |.. ..++|+.|++++|.+.+. .|..+..+++|++|+
T Consensus 44 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-p~~-~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 121 (520)
T 2z7x_B 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKI-SCH-PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLG 121 (520)
T ss_dssp CTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEE-ECC-CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEE
T ss_pred cccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeec-Ccc-ccCCccEEeccCCccccccchhhhccCCcceEEE
Confidence 57899999999999999999999999999999999999854 444 668999999999999984 789999999999999
Q ss_pred ccCCccccccCccCcCCCCC--cEEEccCCcc--ccccccccCCCC----------------------------------
Q 039322 80 VSENHFQGTIPKILRNCSSL--IRVRLNSNNL--TGNISEALGIYP---------------------------------- 121 (708)
Q Consensus 80 l~~n~i~~~~~~~~~~l~~L--~~L~l~~n~i--~~~~~~~~~~~~---------------------------------- 121 (708)
+++|.+++ ..+..+++| ++|++++|.+ ++..+..+..+.
T Consensus 122 L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 198 (520)
T 2z7x_B 122 LSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIK 198 (520)
T ss_dssp EEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEE
T ss_pred ecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccc
Confidence 99999986 457777777 9999999988 544444444422
Q ss_pred -------------------------------------------------CCCEEEcccCcceeeCCCCC-----CCCCCC
Q 039322 122 -------------------------------------------------NLTFIDLSRNDFYGEISSNW-----GKCPKL 147 (708)
Q Consensus 122 -------------------------------------------------~L~~L~l~~n~l~~~~~~~~-----~~l~~L 147 (708)
+|++|++++|++++..+..+ ..+++|
T Consensus 199 ~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L 278 (520)
T 2z7x_B 199 CVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKAL 278 (520)
T ss_dssp ECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEE
T ss_pred ccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCcee
Confidence 78888888888886666666 666665
Q ss_pred CEEEcccCcc--------------------------cccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEcc
Q 039322 148 GTLNVSMNNI--------------------------TGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILR 201 (708)
Q Consensus 148 ~~L~L~~N~i--------------------------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 201 (708)
+.+++++|.+ .... .+..+++|++|++++|++++..|..+..+++|++|+++
T Consensus 279 ~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 356 (520)
T 2z7x_B 279 SIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQ 356 (520)
T ss_dssp EEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECC
T ss_pred EeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEcc
Confidence 5555555554 3211 12678999999999999998889999999999999999
Q ss_pred Cccccc--cCCcccCCCCCCCeEeccCCcccccCC-CCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCC
Q 039322 202 GNQFTG--RLPPEIGSLVDLEYLDLSANRFNNSVP-ENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFG 278 (708)
Q Consensus 202 ~n~l~~--~~~~~~~~~~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~ 278 (708)
+|++++ ..|..+..+++|++|+|++|++++..| ..+..+++|+.|++++|++++..|..+. ++|+.|++++|+|+
T Consensus 357 ~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 357 MNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp SSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred CCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 999996 455678999999999999999997455 4588899999999999999877666554 69999999999999
Q ss_pred CCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCC
Q 039322 279 GEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN 331 (708)
Q Consensus 279 ~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 331 (708)
.+|..+..+++|+.|++++|+++...+..+..+++|+.|++++|+++|.++.
T Consensus 435 -~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 435 -SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp -CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred -ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 6777777999999999999999965555599999999999999999998764
No 274
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.2e-36 Score=307.50 Aligned_cols=230 Identities=11% Similarity=0.075 Sum_probs=182.1
Q ss_pred ccccccceeccccCccEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
++|++.+.||+|+||.||+|... +++.||||++...... .....+.+.+|++++++++||||+++++++.+++..|+|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVL-PDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccccc-CHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 67999999999999999999764 5899999999864322 234567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++... ....++.+++.|++.||+|||++ ||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999999532 35567899999999999999999 99999999999999999999998543
Q ss_pred CCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchh
Q 039322 595 ESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSV 674 (708)
Q Consensus 595 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (708)
|++ .++.++||||||+++|||+||+.||......... ..................
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 229 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL-----APAERDTAGQPIEPADID 229 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS-----EECCBCTTSCBCCHHHHC
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh-----HHHHHHhccCCCChhhcc
Confidence 222 2688999999999999999999999743321100 000011111111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 675 QEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 675 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
...+..+.+++.+||++||++| |++|+++.|+
T Consensus 230 ~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 230 RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence 1233468899999999999999 9999999875
No 275
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.9e-36 Score=310.91 Aligned_cols=233 Identities=21% Similarity=0.266 Sum_probs=181.6
Q ss_pred cccccc-ceeccccCccEEEEEe-CCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHH-HhccCCceeeEEEEEee----C
Q 039322 436 NDFDAQ-YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPCDQIADQKEFLIEVKAL-TEIRHRNIVKFYGFCSH----A 508 (708)
Q Consensus 436 ~~~~~~-~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~l~~~~~~----~ 508 (708)
++|.+. +.||+|+||.||+|.. .+++.||+|++.. ...+.+|++++ +..+||||+++++++.. .
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc---------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 677776 7799999999999965 5789999999864 23466788887 55589999999999977 6
Q ss_pred CeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---CCcEEEee
Q 039322 509 RHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDL---EYEAHVAD 585 (708)
Q Consensus 509 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~D 585 (708)
...++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ ||+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 778999999999999999976442 4589999999999999999999999 9999999999999998 78899999
Q ss_pred cccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 039322 586 FGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDP 665 (708)
Q Consensus 586 fg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 665 (708)
||++.... +..++.++||||+|+++|||++|+.||......... ......+...
T Consensus 164 fg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~----~~~~~~~~~~ 217 (299)
T 3m2w_A 164 FGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKTRIRMG 217 (299)
T ss_dssp CTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------CCSCCSSCTT
T ss_pred cccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh----HHHHHHHhhc
Confidence 99987542 234677899999999999999999999643221110 0011111111
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 039322 666 RLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQVR 707 (708)
Q Consensus 666 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 707 (708)
....+..........+.+++.+||+.||++|||++|+++|-+
T Consensus 218 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~ 259 (299)
T 3m2w_A 218 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 259 (299)
T ss_dssp CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChh
Confidence 221111111223456889999999999999999999998754
No 276
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-36 Score=322.29 Aligned_cols=313 Identities=18% Similarity=0.163 Sum_probs=278.8
Q ss_pred CCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEE
Q 039322 24 NLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRV 102 (708)
Q Consensus 24 ~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 102 (708)
.+++|+.|++++|.+....+..+.. ++|+.|++++|.+.+..+..+..+++|++|++++|.+++..|..|.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 4689999999999998665554543 899999999999999888899999999999999999998888999999999999
Q ss_pred EccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEeccccccc
Q 039322 103 RLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIV 182 (708)
Q Consensus 103 ~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~ 182 (708)
+|++|.++.+++..|..+++|++|++++|+++++.+..|..+++|+.|++++|+++.. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999999988888899999999999999999999999999999999999999999865 3667899999999999988
Q ss_pred ccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhh
Q 039322 183 GEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELE 262 (708)
Q Consensus 183 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 262 (708)
+ +...++|++|++++|.++.. +.. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..|.
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 4 34457899999999999955 332 357999999999999854 5788999999999999999988899999
Q ss_pred hhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCCccccccCcccc
Q 039322 263 KLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEA 342 (708)
Q Consensus 263 ~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~ 342 (708)
.+++|+.|++++|++++ .+..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|+++... ...++.++.+.
T Consensus 270 ~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~ 345 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLT 345 (390)
T ss_dssp TCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEE
T ss_pred ccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC--chhhccCCEEE
Confidence 99999999999999984 5666678999999999999998 56777889999999999999999764 45678899999
Q ss_pred cccccCcCCCC
Q 039322 343 LKGNKGLCGGV 353 (708)
Q Consensus 343 ~~~n~~~c~~~ 353 (708)
+.+|+|.|+|.
T Consensus 346 l~~N~~~~~~~ 356 (390)
T 3o6n_A 346 LSHNDWDCNSL 356 (390)
T ss_dssp CCSSCEEHHHH
T ss_pred cCCCCccchhH
Confidence 99999999763
No 277
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-35 Score=324.74 Aligned_cols=326 Identities=24% Similarity=0.310 Sum_probs=234.0
Q ss_pred CCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccC
Q 039322 3 SLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSE 82 (708)
Q Consensus 3 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 82 (708)
+|+.|++++|.++.+ + .+..+++|++|+|++|.+.+..+ ....++|+.|++++|.+.+..+ +..+++|++|++++
T Consensus 47 ~l~~L~l~~~~i~~l-~-~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 121 (466)
T 1o6v_A 47 QVTTLQADRLGIKSI-D-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 121 (466)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred cccEEecCCCCCccC-c-chhhhcCCCEEECCCCccCCchh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCC
Confidence 455555555555532 2 24555555555555555554333 1122455555555555555333 55555555555555
Q ss_pred CccccccCccCcCCCCCcEEEccCCccccccc-------------------cccCCCCCCCEEEcccCcceeeCCCCCCC
Q 039322 83 NHFQGTIPKILRNCSSLIRVRLNSNNLTGNIS-------------------EALGIYPNLTFIDLSRNDFYGEISSNWGK 143 (708)
Q Consensus 83 n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-------------------~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 143 (708)
|.+++..+ +.++++|++|++++|.++++.. ..+..+++|++|++++|.+..+. .+..
T Consensus 122 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~l~~ 197 (466)
T 1o6v_A 122 NQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDIS--VLAK 197 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCG--GGGG
T ss_pred CCCCCChH--HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCCh--hhcc
Confidence 55553322 5555555555555555543221 23677788888888888887653 4778
Q ss_pred CCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEe
Q 039322 144 CPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLD 223 (708)
Q Consensus 144 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 223 (708)
+++|++|++++|.+++..+ ++.+++|++|++++|++++. ..+..+++|++|++++|.+++..+ +..+++|++|+
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 271 (466)
T 1o6v_A 198 LTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 271 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred CCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEE
Confidence 8888889998888886544 77788899999999988843 457788999999999999885543 88889999999
Q ss_pred ccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccC
Q 039322 224 LSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSG 303 (708)
Q Consensus 224 l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~ 303 (708)
+++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++
T Consensus 272 l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 272 LGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 99999986544 7888999999999999986543 7888999999999999987655 6788999999999999986
Q ss_pred CCCCcccccccccEEecCCCcCCCCCCCccccccCcccccccccCcCCC
Q 039322 304 SIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGG 352 (708)
Q Consensus 304 ~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 352 (708)
. ..+..+++|+.|++++|++++..| ...++.++.+.+.+|+|...+
T Consensus 346 ~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~~~p 391 (466)
T 1o6v_A 346 V--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTNAP 391 (466)
T ss_dssp C--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEECCC
T ss_pred c--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcccCCc
Confidence 5 468889999999999999998877 667788889999999887743
No 278
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.3e-37 Score=342.21 Aligned_cols=321 Identities=21% Similarity=0.199 Sum_probs=265.6
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCC-CCccccCCCCccEE
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSY-LPHNVCRGGALQYF 78 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~-~~~~~~~l~~L~~L 78 (708)
|++|++|+|++|+|+.+.+..|.++++|++|+|++|++++..+..+.. ++|+.|++++|.+.+. .+..+..+++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 578999999999999888899999999999999999998776665654 7899999999998864 56778888999999
Q ss_pred eccCCc-cccccCccCcCCCCCcEEEccCCccccccccccCC------------------------CCCCCEEEcccCcc
Q 039322 79 GVSENH-FQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGI------------------------YPNLTFIDLSRNDF 133 (708)
Q Consensus 79 ~l~~n~-i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~------------------------~~~L~~L~l~~n~l 133 (708)
++++|. ++...+..|.++++|++|++++|.+++..+..+.. +++|++|++++|++
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l 208 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNL 208 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcc
Confidence 999988 44444467888888999999988888766665543 66788888888877
Q ss_pred eeeC--C-------------------------------------------------------------------------
Q 039322 134 YGEI--S------------------------------------------------------------------------- 138 (708)
Q Consensus 134 ~~~~--~------------------------------------------------------------------------- 138 (708)
++.. +
T Consensus 209 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l 288 (549)
T 2z81_A 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTI 288 (549)
T ss_dssp TTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEE
T ss_pred ccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccc
Confidence 6531 0
Q ss_pred --------------------------------------CC-CCCCCCCCEEEcccCcccccCC---ccccCCCCCCEEec
Q 039322 139 --------------------------------------SN-WGKCPKLGTLNVSMNNITGGIP---REIGNSSQLQALDL 176 (708)
Q Consensus 139 --------------------------------------~~-~~~l~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~L 176 (708)
.. +..+++|+.|+|++|++++..+ ..++.+++|++|+|
T Consensus 289 ~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~L 368 (549)
T 2z81_A 289 RRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVL 368 (549)
T ss_dssp ESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEEC
T ss_pred cccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEc
Confidence 00 0247889999999999987553 34788999999999
Q ss_pred ccccccccCC--cccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccc
Q 039322 177 SLNHIVGEIP--KELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFV 254 (708)
Q Consensus 177 ~~n~l~~~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~ 254 (708)
++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|++++|+++. .+..+. ++|+.|++++|+++
T Consensus 369 s~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~ 444 (549)
T 2z81_A 369 SQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLD 444 (549)
T ss_dssp TTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCS
T ss_pred cCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChh
Confidence 9999985432 45889999999999999999 678889999999999999999984 444332 58999999999999
Q ss_pred cCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCC
Q 039322 255 LELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPN 331 (708)
Q Consensus 255 ~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 331 (708)
+.. ..+++|+.|+|++|+|+ .+|. ...+++|+.|++++|++++..|..+..+++|+.|++++|++.|.+|.
T Consensus 445 ~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 445 SFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred hhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 653 47889999999999998 5554 46789999999999999999999999999999999999999998774
No 279
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.8e-35 Score=309.16 Aligned_cols=304 Identities=21% Similarity=0.311 Sum_probs=244.3
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
+++|++|++++|.++.+ ..+..+++|++|+|++|.+++..+ ....++|+.|++++|.++.. ..+..+++|++|++
T Consensus 43 l~~L~~L~l~~~~i~~~--~~~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l 117 (347)
T 4fmz_A 43 LESITKLVVAGEKVASI--QGIEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYL 117 (347)
T ss_dssp HTTCSEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEEC
T ss_pred cccccEEEEeCCccccc--hhhhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEEC
Confidence 36789999999999854 248889999999999999886544 22337899999999988874 36888899999999
Q ss_pred cCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCccccc
Q 039322 81 SENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGG 160 (708)
Q Consensus 81 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 160 (708)
++|.+++..+ +.++++|++|++++|...... ..+..+++|++|++++|.+..+.+ +..+++|+.|++++|.++..
T Consensus 118 ~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~ 192 (347)
T 4fmz_A 118 NEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI 192 (347)
T ss_dssp TTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC
T ss_pred cCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc
Confidence 9999885433 888899999999998554333 348888999999999998876554 77888999999999988854
Q ss_pred CCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCcc
Q 039322 161 IPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNL 240 (708)
Q Consensus 161 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l 240 (708)
.+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+++. ..+..+
T Consensus 193 ~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l 264 (347)
T 4fmz_A 193 SP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDL 264 (347)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTC
T ss_pred cc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcC
Confidence 33 7888899999999998885433 7788899999999999884433 88888999999999988854 457888
Q ss_pred ccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEec
Q 039322 241 LKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDI 320 (708)
Q Consensus 241 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 320 (708)
++|+.|++++|++++. ..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++..| +..+++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 340 (347)
T 4fmz_A 265 TKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADF 340 (347)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESS
T ss_pred CCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeeh
Confidence 8999999999988854 458888899999999999988888888889999999999999886666 778889999999
Q ss_pred CCCcCC
Q 039322 321 SDNQLQ 326 (708)
Q Consensus 321 ~~N~l~ 326 (708)
++|+++
T Consensus 341 ~~N~i~ 346 (347)
T 4fmz_A 341 ANQVIK 346 (347)
T ss_dssp SCC---
T ss_pred hhhccc
Confidence 999875
No 280
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.7e-36 Score=341.77 Aligned_cols=234 Identities=24% Similarity=0.349 Sum_probs=190.0
Q ss_pred ccccccceeccccCccEEEEEeC--CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCe---
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELP--SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSHARH--- 510 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~--- 510 (708)
++|++.+.||+|+||.||+|.+. +|+.||||++... ........+.+|++++++++||||+++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS---GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS---CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc---CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 78999999999999999999764 6899999998753 223456678999999999999999999999987665
Q ss_pred --eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccc
Q 039322 511 --SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGI 588 (708)
Q Consensus 511 --~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 588 (708)
.|+||||+++++|.+++.. .+++.+++.++.||+.||+|||++ ||+||||||+||+++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 6999999999999987753 489999999999999999999999 99999999999999975 899999999
Q ss_pred ccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 039322 589 AKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLP 668 (708)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (708)
+...... ....||+.|+|||++.++ ++.++||||||+++|+|++|..||..... . ..+
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~------------~-----~~~ 285 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV------------D-----GLP 285 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC------------S-----SCC
T ss_pred chhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc------------c-----ccc
Confidence 9876533 345789999999998765 48899999999999999999888762110 0 001
Q ss_pred CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 039322 669 PPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQ 704 (708)
Q Consensus 669 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 704 (708)
...........+.+++.+||++||++||+..+.+.
T Consensus 286 -~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 320 (681)
T 2pzi_A 286 -EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMS 320 (681)
T ss_dssp -TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred -ccccccccCHHHHHHHhhhccCChhhCCCHHHHHH
Confidence 11122233456889999999999999996554443
No 281
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.5e-35 Score=332.52 Aligned_cols=356 Identities=19% Similarity=0.232 Sum_probs=288.4
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEe
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFG 79 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 79 (708)
|++|++|||++|+|+.+.+++|.++++|++|+|++|+|++..+..|.. ++|+.|++++|.+++..+..|+.+++|++|+
T Consensus 75 l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 578999999999999999999999999999999999999887777765 8999999999999998888899999999999
Q ss_pred ccCCccccc-cCccCcCCCCCcEEEccCCccccccccccCC---------------------------------------
Q 039322 80 VSENHFQGT-IPKILRNCSSLIRVRLNSNNLTGNISEALGI--------------------------------------- 119 (708)
Q Consensus 80 l~~n~i~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~--------------------------------------- 119 (708)
+++|.+++. .|..+.++++|++|+|++|+|+++.+..|..
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 999999864 5788899999999999999887654433211
Q ss_pred --------------------------------------------------------------------------------
Q 039322 120 -------------------------------------------------------------------------------- 119 (708)
Q Consensus 120 -------------------------------------------------------------------------------- 119 (708)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred ------------CCCCCEEEcccCcceeeCCC-------------------CCCCCCCCCEEEcccCccccc--------
Q 039322 120 ------------YPNLTFIDLSRNDFYGEISS-------------------NWGKCPKLGTLNVSMNNITGG-------- 160 (708)
Q Consensus 120 ------------~~~L~~L~l~~n~l~~~~~~-------------------~~~~l~~L~~L~L~~N~i~~~-------- 160 (708)
...|+.|++++|.+..+... .+..+++|+.|++++|.+...
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred ccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchh
Confidence 12344445555444322221 123467888888888877521
Q ss_pred -----------------CCccccCCCCCCEEecccccccccCC-cccCCCCCCCEEEccCccccccCCcccCCCCCCCeE
Q 039322 161 -----------------IPREIGNSSQLQALDLSLNHIVGEIP-KELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYL 222 (708)
Q Consensus 161 -----------------~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 222 (708)
.+..+..+++|+.++++.|......+ ..+..+++++.+++++|.+.+..+..+..+++|+.|
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L 474 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 474 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 23345667788888888777764443 467889999999999999998889999999999999
Q ss_pred eccCCcc-cccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccc
Q 039322 223 DLSANRF-NNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNL 301 (708)
Q Consensus 223 ~l~~N~i-~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l 301 (708)
+|++|.+ .+..|..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|+|
T Consensus 475 ~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 9999985 456788899999999999999999999999999999999999999999998899999999999999999999
Q ss_pred cCCCCCccccc-ccccEEecCCCcCCCCCCCcccc---ccCcccccccccCcCCCCCCC
Q 039322 302 SGSIPNCFEGI-RGISVIDISDNQLQGPVPNSTAF---RNAPVEALKGNKGLCGGVKGM 356 (708)
Q Consensus 302 ~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~~~~~~---~~~~~~~~~~n~~~c~~~~~~ 356 (708)
++..|..+..+ ++|+.|++++|++.|.+...+.. ..............|+.|...
T Consensus 555 ~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl~~~~~~~~~~~~~~C~~P~~~ 613 (635)
T 4g8a_A 555 MTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDK 613 (635)
T ss_dssp CBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHHHHTTTTBSCGGGCBBCSSTTT
T ss_pred CCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHHHhCCCccCCCCCceeCCchHH
Confidence 99999999988 68999999999999987643221 111111222344678776643
No 282
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-35 Score=334.40 Aligned_cols=313 Identities=19% Similarity=0.166 Sum_probs=280.4
Q ss_pred CCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEE
Q 039322 24 NLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRV 102 (708)
Q Consensus 24 ~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 102 (708)
.+.+++.|++++|.+...++..+.. ++|+.|++++|.+.+..+..|..+++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 3578999999999998766655543 899999999999999888899999999999999999999888899999999999
Q ss_pred EccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEeccccccc
Q 039322 103 RLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIV 182 (708)
Q Consensus 103 ~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~ 182 (708)
+|++|.++++++..|..+++|++|+|++|.++++.+..|..+++|+.|+|++|.+++.. +..+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999999888999999999999999999999999999999999999999998653 566899999999999988
Q ss_pred ccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhh
Q 039322 183 GEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELE 262 (708)
Q Consensus 183 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 262 (708)
+ +...++|+.|++++|.++...+. + .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|.
T Consensus 206 ~-----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 206 T-----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp E-----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 4 34557899999999999854433 2 3689999999999985 46789999999999999999999999999
Q ss_pred hhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCCccccccCcccc
Q 039322 263 KLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEA 342 (708)
Q Consensus 263 ~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~ 342 (708)
.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++.+.. ...++.++.+.
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~ 351 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLT 351 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEE
T ss_pred CccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEE
Confidence 99999999999999985 5666778999999999999999 67778899999999999999999874 45678899999
Q ss_pred cccccCcCCCC
Q 039322 343 LKGNKGLCGGV 353 (708)
Q Consensus 343 ~~~n~~~c~~~ 353 (708)
+.+|+|.|+|.
T Consensus 352 l~~N~~~~~~~ 362 (597)
T 3oja_B 352 LSHNDWDCNSL 362 (597)
T ss_dssp CCSSCEEHHHH
T ss_pred eeCCCCCChhH
Confidence 99999999873
No 283
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=5.8e-36 Score=320.97 Aligned_cols=246 Identities=15% Similarity=0.112 Sum_probs=180.8
Q ss_pred hccccccceeccccCccEEEEE-eCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC-Cce--------------
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH-RNI-------------- 498 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i-------------- 498 (708)
...|...+.||+|+||.||+|. ..+|+.||||++..... ......+.+.+|+.+++.++| ++.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC-ccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 3568888999999999999997 45799999999884322 222345678999999999976 211
Q ss_pred -------eeEEEEEee-----CCeeEEEEEeccCCCHHHHhccc----ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 039322 499 -------VKFYGFCSH-----ARHSFLVYELLERGSLAAILSSD----TAAQELGWSQRMNVIKGVADALSYLHHDCFPP 562 (708)
Q Consensus 499 -------v~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~----~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ 562 (708)
..+..++.. ....+++|+++ +++|.+++... .....+++..++.++.|+++||+|||++ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 111111211 12356777765 57999988421 1123477889999999999999999999 9
Q ss_pred eEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccCcccc----------ccCCCCcchhHHHHHHHH
Q 039322 563 IVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELA----------YTMKITEKCDVYSFGVLV 632 (708)
Q Consensus 563 ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~DvwslG~~l 632 (708)
|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 999999999999999999999999999865432 344567 999999998 555688899999999999
Q ss_pred HHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039322 633 LEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCLNESPESRPTMKVVTQQ 705 (708)
Q Consensus 633 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 705 (708)
|||++|+.||...... .....++..... .+..+.+++.+||+.||++|||+.|++++
T Consensus 308 ~elltg~~Pf~~~~~~--------~~~~~~~~~~~~--------~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 308 YWIWCADLPNTDDAAL--------GGSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHSSCCCCTTGGG--------SCSGGGGSSCCC--------CCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHCCCCCCCcchh--------hhHHHHHhhccc--------CCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 9999999999743221 111122221111 11358899999999999999999998775
No 284
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.8e-34 Score=313.75 Aligned_cols=302 Identities=26% Similarity=0.294 Sum_probs=194.2
Q ss_pred cCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEE
Q 039322 23 SNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRV 102 (708)
Q Consensus 23 ~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 102 (708)
..+++|+.|++++|.+.. ++..-..++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+ +.++++|++|
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-IDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred hHhccccEEecCCCCCcc-CcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 457899999999999974 4543334899999999999998655 8999999999999999996655 9999999999
Q ss_pred EccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCC---------------------CCCCEEEcccCcccccC
Q 039322 103 RLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKC---------------------PKLGTLNVSMNNITGGI 161 (708)
Q Consensus 103 ~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l---------------------~~L~~L~L~~N~i~~~~ 161 (708)
++++|.++++.+ +..+++|++|++++|.+.++. .+..+ ++|+.|++++|.++..
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~- 192 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI- 192 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC-
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC-
Confidence 999999997754 899999999999999987653 24444 4455555555555432
Q ss_pred CccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccc
Q 039322 162 PREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLL 241 (708)
Q Consensus 162 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~ 241 (708)
..+..+++|++|++++|++++..+ ++.+++|++|++++|++++. ..+..+++|++|++++|.+++..+ +..++
T Consensus 193 -~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~ 265 (466)
T 1o6v_A 193 -SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLT 265 (466)
T ss_dssp -GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred -hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCC
Confidence 234455555555555555543322 44455555555555555532 234555555555555555554333 55555
Q ss_pred cceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecC
Q 039322 242 KLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDIS 321 (708)
Q Consensus 242 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 321 (708)
+|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++|+.|+++
T Consensus 266 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~ 339 (466)
T 1o6v_A 266 KLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFY 339 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECC
T ss_pred CCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECC
Confidence 55566666655553322 5555556666666665554332 4555566666666666654443 4555666666666
Q ss_pred CCcCCCCCCCccccccCcccccccccC
Q 039322 322 DNQLQGPVPNSTAFRNAPVEALKGNKG 348 (708)
Q Consensus 322 ~N~l~~~~~~~~~~~~~~~~~~~~n~~ 348 (708)
+|++++. +....++.++.+.+.+|+.
T Consensus 340 ~n~l~~~-~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 340 NNKVSDV-SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp SSCCCCC-GGGTTCTTCCEEECCSSCC
T ss_pred CCccCCc-hhhccCCCCCEEeCCCCcc
Confidence 6665554 3333445555555555543
No 285
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.8e-34 Score=299.40 Aligned_cols=287 Identities=18% Similarity=0.182 Sum_probs=170.4
Q ss_pred CCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccC
Q 039322 27 NLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNS 106 (708)
Q Consensus 27 ~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~ 106 (708)
+|+.++++++.+. .+|..+. ++++.|++++|.+.+..+..+..+++|++|++++|.+++..|..|.++++|++|+|++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~-~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS-PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC-TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cCCEEECCCCCcc-ccCCCCC-CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 5777777777776 3443332 4566666666666665555666666666666666666655566666666666666666
Q ss_pred CccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccc--cCCccccCCCCCCEEeccccccccc
Q 039322 107 NNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITG--GIPREIGNSSQLQALDLSLNHIVGE 184 (708)
Q Consensus 107 n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~L~~n~l~~~ 184 (708)
|.++.++...+ ++|++|++++|+++.+.+..|..+++|+.|++++|.++. ..+..|..+ +|++|++++|++++
T Consensus 112 n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 112 NHLVEIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SCCCSCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CcCCccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 66664444333 566666666666665555556666666666666666642 445555555 66666666666663
Q ss_pred CCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhh
Q 039322 185 IPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKL 264 (708)
Q Consensus 185 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 264 (708)
+|..+. ++|++|++++|.+++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|+++ .+|..+..+
T Consensus 187 l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 263 (332)
T 2ft3_A 187 IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDL 263 (332)
T ss_dssp CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGC
T ss_pred cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcC
Confidence 333332 46666666666666555556666666666666666666555555666666666666666666 445556666
Q ss_pred cccchhhcccccCCCCCchhhcC------cccCCceeccccccc--CCCCCcccccccccEEecCCC
Q 039322 265 VQLSELDASHNLFGGEIPFQICS------LKSLEKLNLSHNNLS--GSIPNCFEGIRGISVIDISDN 323 (708)
Q Consensus 265 ~~L~~L~ls~N~i~~~~~~~~~~------~~~L~~L~l~~N~l~--~~~~~~~~~l~~L~~l~l~~N 323 (708)
++|+.|++++|+|++..+..+.. .+.|+.|++++|++. +..+.+|..+++|+.+++++|
T Consensus 264 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp TTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred ccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 66666666666666544444433 244566666666655 455555666666666666655
No 286
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.3e-36 Score=313.75 Aligned_cols=250 Identities=16% Similarity=0.141 Sum_probs=190.4
Q ss_pred hccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCc----chhHhHHHHHHHHHHHHhcc---------CCceeeE
Q 039322 435 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPC----DQIADQKEFLIEVKALTEIR---------HRNIVKF 501 (708)
Q Consensus 435 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~---------h~~iv~l 501 (708)
.++|++.+.||+|+||.||+|.. +|+.||||++...... ......+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 47899999999999999999987 6899999999764321 11223467889999988886 7777777
Q ss_pred EEEEe------------------------------eCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHH
Q 039322 502 YGFCS------------------------------HARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADA 551 (708)
Q Consensus 502 ~~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 551 (708)
.+.+. .++..++||||+++|++.+.+.. ..+++..++.++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 76642 26789999999999977666643 347999999999999999
Q ss_pred HHHHH-hCCCCCeEEccCCCCCeeeCCCC--------------------cEEEeecccccccCCCCCccccccccccccC
Q 039322 552 LSYLH-HDCFPPIVHQDISSKNLLLDLEY--------------------EAHVADFGIAKFLKPESSNWTEFAGTYGYVA 610 (708)
Q Consensus 552 l~~Lh-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~a 610 (708)
|+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 88 999999999999999887 8999999999876532 3578999999
Q ss_pred ccccccCCCCcchhHHHHHHH-HHHHHhCCCCCCccccccccccccccccccccCCCCCCCCchhHHHHHHHHHHHHhcc
Q 039322 611 PELAYTMKITEKCDVYSFGVL-VLEAIKGKHPRDFLSLISSSSLNTDIALDEILDPRLPPPSRSVQEKLISIMEVAFSCL 689 (708)
Q Consensus 611 PE~~~~~~~~~~~DvwslG~~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 689 (708)
||++.+.. +.++||||+|++ .+++++|..||....... .......... ................++.+++.+||
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLH---YLTDKMLKQM-TFKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHH---HHHHHHHHTC-CCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhh---HHHHhhhhhh-ccCcccchhhhhhcCHHHHHHHHHHh
Confidence 99988765 889999998776 788889999975311000 0000111111 11111222334556778999999999
Q ss_pred CCCCCCCCCHHHHH-HHhh
Q 039322 690 NESPESRPTMKVVT-QQVR 707 (708)
Q Consensus 690 ~~dP~~RPs~~evl-~~l~ 707 (708)
++| |++|++ +|-+
T Consensus 321 ~~d-----sa~e~l~~Hp~ 334 (336)
T 2vuw_A 321 NFS-----SATDLLCQHSL 334 (336)
T ss_dssp GSS-----SHHHHHHHCGG
T ss_pred ccC-----CHHHHHhcCCC
Confidence 976 999999 8754
No 287
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.5e-35 Score=301.46 Aligned_cols=257 Identities=24% Similarity=0.387 Sum_probs=154.4
Q ss_pred CCccEEeccCCcccc--ccCccCcCCCCCcEEEccC-CccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCE
Q 039322 73 GALQYFGVSENHFQG--TIPKILRNCSSLIRVRLNS-NNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGT 149 (708)
Q Consensus 73 ~~L~~L~l~~n~i~~--~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 149 (708)
.+++.|++++|.+++ .+|..|.++++|++|+|++ |++.+..+..|..+++|++|+|++|++++..+..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 345555555555555 4555555555555555553 5555444555555555555555555554444444445555555
Q ss_pred EEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCC-CCCeEeccCCc
Q 039322 150 LNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLV-DLEYLDLSANR 228 (708)
Q Consensus 150 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-~L~~L~l~~N~ 228 (708)
|+|++|.+++..|..|. .+++|++|+|++|++++..|..+..++ +|++|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~------------------------~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSIS------------------------SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp EECCSSEEESCCCGGGG------------------------GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE
T ss_pred EeCCCCccCCcCChHHh------------------------cCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCe
Confidence 55555555444444444 444555555555555444444444444 45555555555
Q ss_pred ccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCc
Q 039322 229 FNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNC 308 (708)
Q Consensus 229 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~ 308 (708)
+++..|..+..++ |+.|++++|++++..|..|..+++|+.|++++|.+++..+. +..+++|++|++++|++++..|..
T Consensus 186 l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 263 (313)
T 1ogq_A 186 LTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp EEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG
T ss_pred eeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH
Confidence 5544555555444 55555555555555555555566666666666666544433 566677888888888887777888
Q ss_pred ccccccccEEecCCCcCCCCCCCccccccCcccccccccCcCCCCCC
Q 039322 309 FEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCGGVKG 355 (708)
Q Consensus 309 ~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 355 (708)
+..+++|+.|++++|++++.+|....++.++.+.+.+|++.|+.|..
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred HhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 88888888888888888877777777788888888999999987543
No 288
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7.9e-34 Score=295.78 Aligned_cols=290 Identities=20% Similarity=0.192 Sum_probs=212.8
Q ss_pred CCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEcc
Q 039322 26 TNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLN 105 (708)
Q Consensus 26 ~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 105 (708)
.+|+.++++++.+. .+|..+. ++++.|++++|.+++..+..+..+++|++|++++|.+++..|..|.++++|++|+|+
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP-PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC-TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCCeEEEecCCCcc-ccCccCC-CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 36788888888876 3444332 567777777777777666677788888888888888887777778888888888888
Q ss_pred CCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccc--cCCccccCCCCCCEEecccccccc
Q 039322 106 SNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITG--GIPREIGNSSQLQALDLSLNHIVG 183 (708)
Q Consensus 106 ~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~L~~n~l~~ 183 (708)
+|.++.++...+ ++|++|++++|+++++.+..|..+++|+.|++++|.++. ..+..|..+++|++|++++|+++.
T Consensus 109 ~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCSBCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCCccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 888876554433 678888888888877776677778888888888888753 556677778888888888888773
Q ss_pred cCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhh
Q 039322 184 EIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEK 263 (708)
Q Consensus 184 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 263 (708)
+|..+. ++|++|++++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|+++ .+|..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 444333 67888888888888777777888888888888888887766667777888888888888887 56667777
Q ss_pred hcccchhhcccccCCCCCchhhcC------cccCCceecccccccC--CCCCcccccccccEEecCCCc
Q 039322 264 LVQLSELDASHNLFGGEIPFQICS------LKSLEKLNLSHNNLSG--SIPNCFEGIRGISVIDISDNQ 324 (708)
Q Consensus 264 l~~L~~L~ls~N~i~~~~~~~~~~------~~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~l~l~~N~ 324 (708)
+++|+.|++++|+|++..+..|.. .+.|+.|++++|++.. ..|..|..+.+++.+++++|+
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 788888888888887666555543 3667778888887753 566777777888888887774
No 289
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.8e-33 Score=302.34 Aligned_cols=299 Identities=22% Similarity=0.247 Sum_probs=251.9
Q ss_pred CCCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEec
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGV 80 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l 80 (708)
+++|++|+|++|+|+++ | .+..+++|++|+|++|++++. + ....++|+.|++++|.+++. + +..+++|++|++
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~-~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D-LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c-cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 47899999999999975 4 699999999999999999875 3 22348999999999999985 3 889999999999
Q ss_pred cCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCccccc
Q 039322 81 SENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGG 160 (708)
Q Consensus 81 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 160 (708)
++|++++. + ++++++|++|++++|+++++ .++.+++|++|++++|+..+.. .+..+++|+.|++++|++++.
T Consensus 114 ~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l 185 (457)
T 3bz5_A 114 DTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL 185 (457)
T ss_dssp CSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC
T ss_pred CCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee
Confidence 99999964 4 89999999999999999986 3889999999999999543332 578899999999999999964
Q ss_pred CCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCcc
Q 039322 161 IPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNL 240 (708)
Q Consensus 161 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l 240 (708)
+ +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +| +..+++|++|++++|++++..+..+.++
T Consensus 186 -~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L 256 (457)
T 3bz5_A 186 -D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKL 256 (457)
T ss_dssp -C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTC
T ss_pred -c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCC
Confidence 3 88899999999999999965 48899999999999999996 55 8899999999999999998765555554
Q ss_pred c-------cceeecccCcccccCCChhhhhhcccchhhcccccCCCCCch--------hhcCcccCCceecccccccCCC
Q 039322 241 L-------KLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPF--------QICSLKSLEKLNLSHNNLSGSI 305 (708)
Q Consensus 241 ~-------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~--------~~~~~~~L~~L~l~~N~l~~~~ 305 (708)
. +|+.|++++|.+.+..| +..+++|+.|++++|...+.+|. .+..+++|+.|++++|++++.
T Consensus 257 ~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l- 333 (457)
T 3bz5_A 257 TTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL- 333 (457)
T ss_dssp CEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-
T ss_pred CEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-
Confidence 4 45666777776655444 46788999999999986554442 356678999999999999975
Q ss_pred CCcccccccccEEecCCCcCCCC
Q 039322 306 PNCFEGIRGISVIDISDNQLQGP 328 (708)
Q Consensus 306 ~~~~~~l~~L~~l~l~~N~l~~~ 328 (708)
+ +..+++|+.|++++|++++.
T Consensus 334 ~--l~~l~~L~~L~l~~N~l~~l 354 (457)
T 3bz5_A 334 D--VSHNTKLKSLSCVNAHIQDF 354 (457)
T ss_dssp C--CTTCTTCSEEECCSSCCCBC
T ss_pred c--cccCCcCcEEECCCCCCCCc
Confidence 3 88899999999999999974
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=9.8e-34 Score=297.42 Aligned_cols=308 Identities=21% Similarity=0.283 Sum_probs=266.4
Q ss_pred ccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCC
Q 039322 20 PSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSL 99 (708)
Q Consensus 20 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L 99 (708)
..+..+++|++|++++|.+.. ++..-..++|+.|++++|.+++..+ +..+++|++|++++|.+++. ..+.++++|
T Consensus 38 ~~~~~l~~L~~L~l~~~~i~~-~~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 38 VTQEELESITKLVVAGEKVAS-IQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp ECHHHHTTCSEEECCSSCCCC-CTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred ccchhcccccEEEEeCCcccc-chhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 345689999999999999975 3432234899999999999998544 89999999999999999863 469999999
Q ss_pred cEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccc
Q 039322 100 IRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLN 179 (708)
Q Consensus 100 ~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n 179 (708)
++|++++|.++++.+ +..+++|++|++++|...... ..+..+++|++|++++|.+....+ +..+++|++|++++|
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 999999999997655 899999999999999654333 348899999999999999985543 889999999999999
Q ss_pred cccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCCh
Q 039322 180 HIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPK 259 (708)
Q Consensus 180 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 259 (708)
++++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.++.. .
T Consensus 188 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 259 (347)
T 4fmz_A 188 QIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--N 259 (347)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--G
T ss_pred ccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--h
Confidence 9985433 8889999999999999995443 8889999999999999996554 88999999999999999854 5
Q ss_pred hhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCCCccccccCc
Q 039322 260 ELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAP 339 (708)
Q Consensus 260 ~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~ 339 (708)
.+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++.+| ...++.++
T Consensus 260 ~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~ 336 (347)
T 4fmz_A 260 AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMD 336 (347)
T ss_dssp GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCS
T ss_pred hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccc
Confidence 689999999999999999864 357889999999999999998888999999999999999999999877 66788899
Q ss_pred ccccccccC
Q 039322 340 VEALKGNKG 348 (708)
Q Consensus 340 ~~~~~~n~~ 348 (708)
.+.+.+|+.
T Consensus 337 ~L~l~~N~i 345 (347)
T 4fmz_A 337 SADFANQVI 345 (347)
T ss_dssp EESSSCC--
T ss_pred eeehhhhcc
Confidence 999999864
No 291
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.3e-33 Score=289.54 Aligned_cols=288 Identities=18% Similarity=0.195 Sum_probs=253.4
Q ss_pred CCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEecc
Q 039322 3 SLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVS 81 (708)
Q Consensus 3 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~ 81 (708)
+++.++++++.++. .|..+ .++|++|+|++|++++..+..+.. ++|+.|++++|.+++..|..+..+++|++|+++
T Consensus 32 ~l~~l~~~~~~l~~-lp~~~--~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLEK-VPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCCS-CCCSC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCccc-cCccC--CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 58899999999995 44444 368999999999999887777765 899999999999999889999999999999999
Q ss_pred CCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCccee--eCCCCCCCCCCCCEEEcccCcccc
Q 039322 82 ENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYG--EISSNWGKCPKLGTLNVSMNNITG 159 (708)
Q Consensus 82 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~N~i~~ 159 (708)
+|.++ .+|..+. ++|++|++++|.++++.+..|..+++|++|++++|.+.. +.+..|..+++|+.|++++|.++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 99999 5555554 799999999999999999999999999999999999964 677889999999999999999995
Q ss_pred cCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCc
Q 039322 160 GIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGN 239 (708)
Q Consensus 160 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~ 239 (708)
.|..+. ++|++|++++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|+++ ..|..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 444443 89999999999999888899999999999999999999888888999999999999999999 77888999
Q ss_pred cccceeecccCcccccCCChhhhh------hcccchhhcccccCCC--CCchhhcCcccCCceeccccc
Q 039322 240 LLKLHYLGLSNNQFVLELPKELEK------LVQLSELDASHNLFGG--EIPFQICSLKSLEKLNLSHNN 300 (708)
Q Consensus 240 l~~L~~L~l~~n~l~~~~~~~~~~------l~~L~~L~ls~N~i~~--~~~~~~~~~~~L~~L~l~~N~ 300 (708)
+++|+.|++++|+|++..+..|.. ...|+.|++++|++.. ..|..+..+++++.++|++|+
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 999999999999999887777754 3788999999999974 567888899999999999985
No 292
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.1e-34 Score=297.07 Aligned_cols=249 Identities=24% Similarity=0.359 Sum_probs=223.9
Q ss_pred CCcccccccCCCccC--CCCccccCCCCccEEeccC-CccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCE
Q 039322 49 PMLTRPGLDFNHFTS--YLPHNVCRGGALQYFGVSE-NHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTF 125 (708)
Q Consensus 49 ~~l~~l~l~~n~~~~--~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~ 125 (708)
.+++.|++++|.+.+ .+|..+..+++|++|++++ |.+++.+|..|.++++|++|+|++|++++..+..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999998 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCC-CCCEEecccccccccCCcccCCCCCCCEEEccCcc
Q 039322 126 IDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSS-QLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQ 204 (708)
Q Consensus 126 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 204 (708)
|++++|.+++..+..|..+++|++|+|++|++++..|..+..++ +|++|+|++|++++..|..+..++ |++|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999988899999999999999999999988999999998 999999999999988999998887 9999999999
Q ss_pred ccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchh
Q 039322 205 FTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQ 284 (708)
Q Consensus 205 l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~ 284 (708)
+++..+..|..+++|+.|+|++|++++..+. +..+++|+.|++++|++++..|..|..+++|+.|+|++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9988888899999999999999999865554 777888888888888888778888888888888888888887666654
Q ss_pred hcCcccCCceeccccc
Q 039322 285 ICSLKSLEKLNLSHNN 300 (708)
Q Consensus 285 ~~~~~~L~~L~l~~N~ 300 (708)
..+++|+.|++++|+
T Consensus 288 -~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNK 302 (313)
T ss_dssp -TTGGGSCGGGTCSSS
T ss_pred -ccccccChHHhcCCC
Confidence 667777777777776
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.4e-33 Score=291.17 Aligned_cols=287 Identities=21% Similarity=0.229 Sum_probs=253.4
Q ss_pred CCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEecc
Q 039322 3 SLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVS 81 (708)
Q Consensus 3 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~ 81 (708)
+++.++++++.++. .|..+ .++|++|+|++|.+.+..+..+.. ++|+.|++++|.+++..|..+..+++|++|+++
T Consensus 34 ~l~~l~~~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLKA-VPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCSS-CCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCccc-cCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 58999999999995 45544 378999999999999888877766 899999999999999889999999999999999
Q ss_pred CCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCccee--eCCCCCCCCCCCCEEEcccCcccc
Q 039322 82 ENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYG--EISSNWGKCPKLGTLNVSMNNITG 159 (708)
Q Consensus 82 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~N~i~~ 159 (708)
+|.++ .+|..+. ++|++|++++|.++.+.+..|..+++|++|++++|.++. +.+..+..+ +|+.|++++|+++.
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99999 5555554 899999999999999999999999999999999999964 677888888 99999999999996
Q ss_pred cCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCc
Q 039322 160 GIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGN 239 (708)
Q Consensus 160 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~ 239 (708)
.|..+. ++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 444443 78999999999999888889999999999999999999888888999999999999999999 77888999
Q ss_pred cccceeecccCcccccCCChhhhhh------cccchhhcccccCC--CCCchhhcCcccCCceeccccc
Q 039322 240 LLKLHYLGLSNNQFVLELPKELEKL------VQLSELDASHNLFG--GEIPFQICSLKSLEKLNLSHNN 300 (708)
Q Consensus 240 l~~L~~L~l~~n~l~~~~~~~~~~l------~~L~~L~ls~N~i~--~~~~~~~~~~~~L~~L~l~~N~ 300 (708)
+++|+.|++++|+|+...+..|... ..|+.|++++|++. +..+..+..+++|+.+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 9999999999999998877777653 67999999999997 5778889999999999999985
No 294
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.98 E-value=1.3e-31 Score=290.28 Aligned_cols=308 Identities=19% Similarity=0.222 Sum_probs=259.6
Q ss_pred cccccCCccccCCCCCCEEEeeCceeeeeCCCCCC-CCCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCc
Q 039322 13 QFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLE-NPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPK 91 (708)
Q Consensus 13 ~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~ 91 (708)
.+....+..++++++|++|+|++|.+++. | .+. .++|+.|++++|.+++. + ++.+++|++|++++|.+++. +
T Consensus 29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~- 101 (457)
T 3bz5_A 29 EMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D- 101 (457)
T ss_dssp TCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C-
T ss_pred CcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e-
Confidence 34444566788999999999999999864 5 344 38999999999999985 3 88999999999999999974 3
Q ss_pred cCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCC
Q 039322 92 ILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQL 171 (708)
Q Consensus 92 ~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 171 (708)
++++++|++|++++|+++++. +..+++|++|++++|+++++ .+..+++|+.|++++|+..+.. .+..+++|
T Consensus 102 -~~~l~~L~~L~L~~N~l~~l~---~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L 172 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTKLD---VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQL 172 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSCCC---CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTC
T ss_pred -cCCCCcCCEEECCCCcCCeec---CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcC
Confidence 899999999999999999863 89999999999999999876 3788999999999999644343 58889999
Q ss_pred CEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCc
Q 039322 172 QALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNN 251 (708)
Q Consensus 172 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n 251 (708)
++|++++|++++ ++ +..+++|+.|++++|++++. .+..+++|++|++++|++++ .| +..+++|+.|++++|
T Consensus 173 ~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSS
T ss_pred CEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCC
Confidence 999999999996 44 88999999999999999965 48899999999999999997 45 889999999999999
Q ss_pred ccccCCChhhhhhc-------ccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCC--------ccccccccc
Q 039322 252 QFVLELPKELEKLV-------QLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPN--------CFEGIRGIS 316 (708)
Q Consensus 252 ~l~~~~~~~~~~l~-------~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~--------~~~~l~~L~ 316 (708)
++++..+..+..+. +|+.|++++|.+.+..| +..+++|+.|++++|+..+.+|. .+..+++|+
T Consensus 244 ~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~ 321 (457)
T 3bz5_A 244 PLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLV 321 (457)
T ss_dssp CCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCC
T ss_pred cCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCC
Confidence 99987766666555 56778888887766555 56789999999999986554443 356778999
Q ss_pred EEecCCCcCCCCCCCccccccCcccccccccCc
Q 039322 317 VIDISDNQLQGPVPNSTAFRNAPVEALKGNKGL 349 (708)
Q Consensus 317 ~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~ 349 (708)
.|++++|.+++. + ...++.++.+.+++|...
T Consensus 322 ~L~L~~N~l~~l-~-l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 322 YLYLNNTELTEL-D-VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp EEECTTCCCSCC-C-CTTCTTCSEEECCSSCCC
T ss_pred EEECCCCccccc-c-cccCCcCcEEECCCCCCC
Confidence 999999999996 3 566778889999888754
No 295
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.1e-31 Score=276.53 Aligned_cols=276 Identities=20% Similarity=0.229 Sum_probs=211.4
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeC--CCCCCCCCCCCEEEcc
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEI--SSNWGKCPKLGTLNVS 153 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~L~ 153 (708)
+.++++++.++ .+|..+. ++|++|+|++|+++.++...|..+++|++|+|++|+++.+. +..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 46777777777 4555443 57888888888888777777778888888888888776442 3455567888888888
Q ss_pred cCcccccCCccccCCCCCCEEecccccccccCC-cccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccc-
Q 039322 154 MNNITGGIPREIGNSSQLQALDLSLNHIVGEIP-KELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNN- 231 (708)
Q Consensus 154 ~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~- 231 (708)
+|.++. .+..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..+..+++|++|++++|.+++
T Consensus 87 ~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 888873 45567788888888888888875544 467788888888888888887777778888888888888888875
Q ss_pred cCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccc
Q 039322 232 SVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEG 311 (708)
Q Consensus 232 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~ 311 (708)
..|..+..+++|+.|++++|++++..|..|..+++|+.|++++|.+++..+..+..+++|+.|++++|++++..+..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 56777888888888888888888777888888888888888888888777777888889999999999998888888888
Q ss_pred cc-cccEEecCCCcCCCCCCCc---cccccCcccccccccCcCCCCCC
Q 039322 312 IR-GISVIDISDNQLQGPVPNS---TAFRNAPVEALKGNKGLCGGVKG 355 (708)
Q Consensus 312 l~-~L~~l~l~~N~l~~~~~~~---~~~~~~~~~~~~~n~~~c~~~~~ 355 (708)
++ +|+.|++++|+++|.++.. .++...+......+...|..|..
T Consensus 246 ~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~ 293 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 293 (306)
T ss_dssp CCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGG
T ss_pred hhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchh
Confidence 84 8999999999998876542 22334455556667777766544
No 296
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=1.5e-30 Score=281.59 Aligned_cols=262 Identities=25% Similarity=0.287 Sum_probs=126.3
Q ss_pred CcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcc
Q 039322 50 MLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLS 129 (708)
Q Consensus 50 ~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~ 129 (708)
+|+.|++++|.+++ +| .++.+++|++|++++|++++ +|..+ ++|++|++++|++++++ .|..+++|++|+++
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP--ELQNLPFLTAIYAD 203 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC--CCTTCTTCCEEECC
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc--cccCCCCCCEEECC
Confidence 45555555555544 33 34455555555555555543 23221 34555555555555432 34555555555555
Q ss_pred cCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccC
Q 039322 130 RNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRL 209 (708)
Q Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 209 (708)
+|+++++.. ..++|+.|++++|.++ .+| .+..+++|++|++++|++++ +|. .+++|++|++++|++++ +
T Consensus 204 ~N~l~~l~~----~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~---~~~~L~~L~l~~N~l~~-l 272 (454)
T 1jl5_A 204 NNSLKKLPD----LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTD-L 272 (454)
T ss_dssp SSCCSSCCC----CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCcCCC----CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccc---cccccCEEECCCCcccc-c
Confidence 555543221 1134555555555554 233 25555555555555555552 222 12455555555555553 2
Q ss_pred CcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhh-cccchhhcccccCCCCCchhhcCc
Q 039322 210 PPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKL-VQLSELDASHNLFGGEIPFQICSL 288 (708)
Q Consensus 210 ~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~ls~N~i~~~~~~~~~~~ 288 (708)
|.. .++|++|++++|++++. +.. .++|+.|++++|++++. ..+ ++|+.|++++|++++ +|.. +
T Consensus 273 ~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~---~ 336 (454)
T 1jl5_A 273 PEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPAL---P 336 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCC---C
T ss_pred Ccc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-cccc---C
Confidence 222 24555555555555531 110 13455555555555431 122 377778888888774 3332 4
Q ss_pred ccCCceecccccccCCCCCcccccccccEEecCCCcCCC--CCCC-cccc-------------ccCcccccccccCcC
Q 039322 289 KSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQG--PVPN-STAF-------------RNAPVEALKGNKGLC 350 (708)
Q Consensus 289 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~--~~~~-~~~~-------------~~~~~~~~~~n~~~c 350 (708)
++|+.|++++|+++. +|. .+++|+.|++++|++++ ..|. ...+ ++++.+.+++|+...
T Consensus 337 ~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 337 PRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------
T ss_pred CcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 778888888888874 444 36778888888888887 3333 2222 456777777777654
No 297
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=9.1e-31 Score=283.76 Aligned_cols=253 Identities=21% Similarity=0.220 Sum_probs=193.4
Q ss_pred CccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcc
Q 039322 74 ALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVS 153 (708)
Q Consensus 74 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 153 (708)
....++++++.++ .+|..+. ++++.|+|++|+|+.+.+..|.++++|++|+|++|+++.+.+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3567777777777 5565554 677778888888877777777788888888888888877777777778888888888
Q ss_pred cCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccC-ccccccCCcccCCCCCCCeEeccCCccccc
Q 039322 154 MNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRG-NQFTGRLPPEIGSLVDLEYLDLSANRFNNS 232 (708)
Q Consensus 154 ~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~ 232 (708)
+|+|+...+..|..+++|++|+|++|+++...+..|..+++|++|+|++ |.+....+..|.++++|++|+|++|+++ .
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-S
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-c
Confidence 8888766666777778888888888887766666777778888888877 4555455556777888888888888887 3
Q ss_pred CCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCccccc
Q 039322 233 VPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGI 312 (708)
Q Consensus 233 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l 312 (708)
.| .+..+++|+.|+|++|++++..+..|.++++|+.|+|++|.|++..+..+..+++|+.|+|++|++++..+..|..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 34 46777788888888888887777778888888888888888887777777788888888888888887777777888
Q ss_pred ccccEEecCCCcCCCCCCC
Q 039322 313 RGISVIDISDNQLQGPVPN 331 (708)
Q Consensus 313 ~~L~~l~l~~N~l~~~~~~ 331 (708)
++|+.|++++|++.|.+..
T Consensus 279 ~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp TTCCEEECCSSCEECSSTT
T ss_pred cCCCEEEcCCCCccCCCCc
Confidence 8888888888888876654
No 298
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=2.2e-30 Score=281.72 Aligned_cols=253 Identities=22% Similarity=0.207 Sum_probs=218.4
Q ss_pred CccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcc
Q 039322 74 ALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVS 153 (708)
Q Consensus 74 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 153 (708)
....++++++.++ .+|..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+++++.+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4567888888888 5666554 688999999999998888889999999999999999988888889999999999999
Q ss_pred cCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccC-ccccccCCcccCCCCCCCeEeccCCccccc
Q 039322 154 MNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRG-NQFTGRLPPEIGSLVDLEYLDLSANRFNNS 232 (708)
Q Consensus 154 ~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~ 232 (708)
+|+|+...+..|..+++|++|+|++|+++...+..|..+++|++|++++ |.+....+..|.++++|++|+|++|++++.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 9999887777888899999999999999877777888899999999998 566655566788899999999999999854
Q ss_pred CCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCccccc
Q 039322 233 VPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGI 312 (708)
Q Consensus 233 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l 312 (708)
| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|.+++..+..+..+++|+.|+|++|++++..+..|..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 3 47888899999999999998888889999999999999999988888888889999999999999998888888889
Q ss_pred ccccEEecCCCcCCCCCCC
Q 039322 313 RGISVIDISDNQLQGPVPN 331 (708)
Q Consensus 313 ~~L~~l~l~~N~l~~~~~~ 331 (708)
++|+.|++++|++.|.+..
T Consensus 290 ~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TTCCEEECCSSCEECSTTT
T ss_pred cCCCEEEccCCCcCCCCCc
Confidence 9999999999999887654
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=282.30 Aligned_cols=258 Identities=17% Similarity=0.154 Sum_probs=135.6
Q ss_pred CccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcc
Q 039322 74 ALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVS 153 (708)
Q Consensus 74 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 153 (708)
+|++|++++|++++..+..|.++++|++|+|++|+++++.+..|..+++|++|++++|+++++.+..|..+++|++|+|+
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 45555555555554444445555555555555555554444445555555555555555544443334445555555555
Q ss_pred cCcccccCC-ccccCCCCCCEEecccc-cccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccc
Q 039322 154 MNNITGGIP-REIGNSSQLQALDLSLN-HIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNN 231 (708)
Q Consensus 154 ~N~i~~~~~-~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~ 231 (708)
+|+++.... ..|..+++|++|++++| .++...+..+.++++|++|++++|++++..|..+..+++|++|++++|+++.
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 212 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL 212 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc
Confidence 555543322 24445555555555555 2443334445555555555555555554445555555555555555555542
Q ss_pred cCCCCCCccccceeecccCcccccCCChhhh---hhcccchhhcccccCCC----CCchhhcCcccCCceecccccccCC
Q 039322 232 SVPENLGNLLKLHYLGLSNNQFVLELPKELE---KLVQLSELDASHNLFGG----EIPFQICSLKSLEKLNLSHNNLSGS 304 (708)
Q Consensus 232 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~ls~N~i~~----~~~~~~~~~~~L~~L~l~~N~l~~~ 304 (708)
.....+..+++|+.|++++|++++..+..+. ....++.+++++|.+.+ .+|..+..+++|+.|++++|+++..
T Consensus 213 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i 292 (353)
T 2z80_A 213 LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSV 292 (353)
T ss_dssp HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCC
T ss_pred chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCcc
Confidence 2222223345555555555555543333222 22344445555554443 3455667777888888888888754
Q ss_pred CCCcccccccccEEecCCCcCCCCCCC
Q 039322 305 IPNCFEGIRGISVIDISDNQLQGPVPN 331 (708)
Q Consensus 305 ~~~~~~~l~~L~~l~l~~N~l~~~~~~ 331 (708)
.+..|..+++|+.|++++|++.|.+|.
T Consensus 293 ~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 293 PDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 444467778888888888888777653
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.5e-31 Score=278.38 Aligned_cols=278 Identities=18% Similarity=0.143 Sum_probs=240.3
Q ss_pred CCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEc
Q 039322 73 GALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNV 152 (708)
Q Consensus 73 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 152 (708)
+.....+++++.++ .+|..+. ++|++|++++|+++++.+..|..+++|++|++++|+++++.+..|.++++|++|+|
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 44556899999999 5666655 59999999999999998889999999999999999999999999999999999999
Q ss_pred ccCcccccCCccccCCCCCCEEecccccccccCC-cccCCCCCCCEEEccCc-cccccCCcccCCCCCCCeEeccCCccc
Q 039322 153 SMNNITGGIPREIGNSSQLQALDLSLNHIVGEIP-KELGKLNSLTELILRGN-QFTGRLPPEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 153 ~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~~~~L~~L~l~~N~i~ 230 (708)
++|+|+...+..|..+++|++|+|++|+++.... ..+..+++|++|++++| .+++..+..|..+++|++|++++|+++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 9999997766669999999999999999995444 47899999999999999 588777888999999999999999999
Q ss_pred ccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhc---CcccCCceecccccccC----
Q 039322 231 NSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQIC---SLKSLEKLNLSHNNLSG---- 303 (708)
Q Consensus 231 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~---~~~~L~~L~l~~N~l~~---- 303 (708)
+..|..+..+++|+.|++++|+++......+..+++|+.|++++|.+++..+..+. ..+.++.+++++|.+++
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~ 267 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF 267 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHH
T ss_pred ccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchh
Confidence 88899999999999999999999855445566789999999999999976554433 35667788888887764
Q ss_pred CCCCcccccccccEEecCCCcCCCCCCCc-cccccCcccccccccCcCCCC
Q 039322 304 SIPNCFEGIRGISVIDISDNQLQGPVPNS-TAFRNAPVEALKGNKGLCGGV 353 (708)
Q Consensus 304 ~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 353 (708)
.+|..+..+++|+.|++++|.++..++.. ..++.++.+.+.+|+|.|+|+
T Consensus 268 ~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 268 QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 35677889999999999999999766654 578889999999999999885
No 301
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=1.9e-29 Score=272.96 Aligned_cols=299 Identities=26% Similarity=0.289 Sum_probs=208.3
Q ss_pred CCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccC
Q 039322 3 SLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSE 82 (708)
Q Consensus 3 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 82 (708)
++++|++++|+++++. .. .++|++|+|++|.+++ +|..+ ++|+.|++++|.+++. +.. .++|++|++++
T Consensus 72 ~l~~L~l~~~~l~~lp-~~---~~~L~~L~l~~n~l~~-lp~~~--~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~ 140 (454)
T 1jl5_A 72 QAHELELNNLGLSSLP-EL---PPHLESLVASCNSLTE-LPELP--QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSN 140 (454)
T ss_dssp TCSEEECTTSCCSCCC-SC---CTTCSEEECCSSCCSS-CCCCC--TTCCEEECCSSCCSCC-CSC---CTTCCEEECCS
T ss_pred CCCEEEecCCccccCC-CC---cCCCCEEEccCCcCCc-ccccc--CCCcEEECCCCccCcc-cCC---CCCCCEEECcC
Confidence 3567777777776532 21 3567777777777765 44322 5677777777777652 211 15777888888
Q ss_pred CccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCC
Q 039322 83 NHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIP 162 (708)
Q Consensus 83 n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 162 (708)
|++++ +| .|+++++|++|++++|++++++. . .++|++|++++|+++++. .+..+++|+.|++++|++++ .|
T Consensus 141 n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~-~---~~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~-l~ 211 (454)
T 1jl5_A 141 NQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPD-L---PPSLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKK-LP 211 (454)
T ss_dssp SCCSS-CC-CCTTCTTCCEEECCSSCCSCCCC-C---CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSS-CC
T ss_pred CCCCC-Cc-ccCCCCCCCEEECCCCcCcccCC-C---cccccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCc-CC
Confidence 87775 55 47777888888888887775432 1 247788888888777643 47777888888888887774 33
Q ss_pred ccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCcccc
Q 039322 163 REIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLK 242 (708)
Q Consensus 163 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~ 242 (708)
.. .++|++|++++|+++ .+| .+..+++|++|++++|++++ +|.. .++|++|++++|++++ .|.. .++
T Consensus 212 ~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~ 278 (454)
T 1jl5_A 212 DL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQS 278 (454)
T ss_dssp CC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred CC---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCc
Confidence 22 247788888888777 455 37777888888888888774 4432 3678888888888874 4433 367
Q ss_pred ceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCc-ccCCceecccccccCCCCCcccccccccEEecC
Q 039322 243 LHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSL-KSLEKLNLSHNNLSGSIPNCFEGIRGISVIDIS 321 (708)
Q Consensus 243 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 321 (708)
|+.|++++|++++.. . + .++|+.|++++|.+++. ..+ ++|+.|++++|++++ +|.. +++|+.|+++
T Consensus 279 L~~L~ls~N~l~~l~-~-~--~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~ 345 (454)
T 1jl5_A 279 LTFLDVSENIFSGLS-E-L--PPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIAS 345 (454)
T ss_dssp CCEEECCSSCCSEES-C-C--CTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CCEEECcCCccCccc-C-c--CCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-cccc---CCcCCEEECC
Confidence 888888888887521 1 1 15788888888888742 223 589999999999996 5544 5899999999
Q ss_pred CCcCCCCCCCccccccCcccccccccCcC
Q 039322 322 DNQLQGPVPNSTAFRNAPVEALKGNKGLC 350 (708)
Q Consensus 322 ~N~l~~~~~~~~~~~~~~~~~~~~n~~~c 350 (708)
+|.+++.++ .+..++.+.+++|+..+
T Consensus 346 ~N~l~~lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 346 FNHLAEVPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp SSCCSCCCC---CCTTCCEEECCSSCCSS
T ss_pred CCccccccc---hhhhccEEECCCCCCCc
Confidence 999997544 46789999999998877
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=5.1e-30 Score=263.99 Aligned_cols=280 Identities=19% Similarity=0.152 Sum_probs=137.2
Q ss_pred cEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCc
Q 039322 5 SILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENH 84 (708)
Q Consensus 5 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~ 84 (708)
+.++++++.++.+. ..+ .++|++|+|++|+++...+. .+..+++|++|++++|.
T Consensus 10 ~~l~c~~~~l~~ip-~~~--~~~l~~L~L~~n~l~~i~~~-----------------------~~~~l~~L~~L~L~~n~ 63 (306)
T 2z66_A 10 TEIRCNSKGLTSVP-TGI--PSSATRLELESNKLQSLPHG-----------------------VFDKLTQLTKLSLSSNG 63 (306)
T ss_dssp TEEECCSSCCSSCC-SCC--CTTCCEEECCSSCCCCCCTT-----------------------TTTTCTTCSEEECCSSC
T ss_pred CEEEcCCCCcccCC-CCC--CCCCCEEECCCCccCccCHh-----------------------HhhccccCCEEECCCCc
Confidence 35666666666433 222 24566666666666543332 34444555555555555
Q ss_pred cccc--cCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCC-CCCCCCCCCCEEEcccCcccccC
Q 039322 85 FQGT--IPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEIS-SNWGKCPKLGTLNVSMNNITGGI 161 (708)
Q Consensus 85 i~~~--~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~ 161 (708)
++.. .+..+..+++|++|+|++|.++.++ ..+..+++|++|++++|+++++.+ ..+..+++|++|++++|.++...
T Consensus 64 l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 142 (306)
T 2z66_A 64 LSFKGCCSQSDFGTTSLKYLDLSFNGVITMS-SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 142 (306)
T ss_dssp CCEEEEEEHHHHSCSCCCEEECCSCSEEEEE-EEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECS
T ss_pred cCcccCcccccccccccCEEECCCCccccCh-hhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccc
Confidence 4422 1333444455555555555554322 234445555555555555544433 34445555555555555555444
Q ss_pred CccccCCCCCCEEecccccccc-cCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCcc
Q 039322 162 PREIGNSSQLQALDLSLNHIVG-EIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNL 240 (708)
Q Consensus 162 ~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l 240 (708)
+..|..+++|++|+|++|.+++ ..|..+..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..+..+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 4445555555555555555543 344445555555555555555554444455555555555555555554444444555
Q ss_pred ccceeecccCcccccCCChhhhhhc-ccchhhcccccCCCCCc--hhhcCcccCCceecccccccCCCCCcccc
Q 039322 241 LKLHYLGLSNNQFVLELPKELEKLV-QLSELDASHNLFGGEIP--FQICSLKSLEKLNLSHNNLSGSIPNCFEG 311 (708)
Q Consensus 241 ~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~ls~N~i~~~~~--~~~~~~~~L~~L~l~~N~l~~~~~~~~~~ 311 (708)
++|+.|++++|++++..+..+..++ +|+.|+|++|++..... .....+...+.+.+..+.+.+..|..+.+
T Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp TTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred ccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 5555555555555544444454442 55555555555543211 11122333444444555555555554444
No 303
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.5e-30 Score=263.35 Aligned_cols=251 Identities=19% Similarity=0.155 Sum_probs=126.5
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccC
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMN 155 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 155 (708)
+.++++++.++ .+|..+ .++|++|+|++|.++++.+..|..+++|++|++++|.++++.+..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 34455555544 223222 234555555555555554445555555555555555555554555555555555555555
Q ss_pred c-ccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCC
Q 039322 156 N-ITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVP 234 (708)
Q Consensus 156 ~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~ 234 (708)
. ++...+..|..+++|++|+|++|++++..+..+..+++|++|++++|++++..+..|..+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 4 444444455555555555555555554444445555555555555555554444445555555555555555554444
Q ss_pred CCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCccccccc
Q 039322 235 ENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRG 314 (708)
Q Consensus 235 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~ 314 (708)
..|..+++|+.|++++|++++..|..|..+++|+.|++++|.+++..+..+..+++|+.|++++|++.+..+ ...-+..
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~-~~~~~~~ 249 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR-ARPLWAW 249 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG-GHHHHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC-cHHHHHH
Confidence 445555555555555555555545555555555555555555554444445555555555555555553221 1122233
Q ss_pred ccEEecCCCcCCCCCC
Q 039322 315 ISVIDISDNQLQGPVP 330 (708)
Q Consensus 315 L~~l~l~~N~l~~~~~ 330 (708)
++.+..+.|.+.|..|
T Consensus 250 l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 250 LQKFRGSSSEVPCSLP 265 (285)
T ss_dssp HHHCCSEECCCBEEES
T ss_pred HHhcccccCccccCCc
Confidence 4444455555555444
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=5.2e-30 Score=277.76 Aligned_cols=248 Identities=20% Similarity=0.217 Sum_probs=189.5
Q ss_pred cccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEccc
Q 039322 51 LTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSR 130 (708)
Q Consensus 51 l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~ 130 (708)
...++++++.++. +|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.|+.+.+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLRE-VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCSS-CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcCc-CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 3445555555554 444443 5677888888888877777788888888888888888877777888888888888888
Q ss_pred CcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEeccc-ccccccCCcccCCCCCCCEEEccCccccccC
Q 039322 131 NDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSL-NHIVGEIPKELGKLNSLTELILRGNQFTGRL 209 (708)
Q Consensus 131 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 209 (708)
|+++.+.+..|..+++|++|+|++|.|+...+..|..+++|++|+|++ |.+....+..|.++++|++|+|++|.++ .+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc
Confidence 888777777788888888888888888877777788888888888887 4455444556777888888888888887 44
Q ss_pred CcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcc
Q 039322 210 PPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLK 289 (708)
Q Consensus 210 ~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~ 289 (708)
| .+..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..+..+..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 4 467778888888888888877777888888888888888888877777788888888888888888877777777788
Q ss_pred cCCceecccccccC
Q 039322 290 SLEKLNLSHNNLSG 303 (708)
Q Consensus 290 ~L~~L~l~~N~l~~ 303 (708)
+|+.|+|++|++.+
T Consensus 280 ~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 280 HLERIHLHHNPWNC 293 (440)
T ss_dssp TCCEEECCSSCEEC
T ss_pred CCCEEEcCCCCccC
Confidence 88888888888763
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=5.1e-30 Score=278.84 Aligned_cols=248 Identities=22% Similarity=0.215 Sum_probs=199.7
Q ss_pred cccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEccc
Q 039322 51 LTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSR 130 (708)
Q Consensus 51 l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~ 130 (708)
...++++++.++. +|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 56 ~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 3455566666655 444443 5788888888888887788888888888888888888888888888888888888888
Q ss_pred CcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEeccc-ccccccCCcccCCCCCCCEEEccCccccccC
Q 039322 131 NDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSL-NHIVGEIPKELGKLNSLTELILRGNQFTGRL 209 (708)
Q Consensus 131 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 209 (708)
|+++.+.+..|..+++|++|+|++|+|+...+..|..+++|++|+|++ |.+....+..|.++++|++|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 888888777888888888888888888877777888888888888888 455544455688888888888888888843
Q ss_pred CcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcc
Q 039322 210 PPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLK 289 (708)
Q Consensus 210 ~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~ 289 (708)
| .+..+++|++|+|++|+|++..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..+..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 3 477888888888888888887788888888888888888888888888888888888888888888877777778888
Q ss_pred cCCceecccccccC
Q 039322 290 SLEKLNLSHNNLSG 303 (708)
Q Consensus 290 ~L~~L~l~~N~l~~ 303 (708)
+|+.|+|++|++.+
T Consensus 291 ~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 291 YLVELHLHHNPWNC 304 (452)
T ss_dssp TCCEEECCSSCEEC
T ss_pred CCCEEEccCCCcCC
Confidence 88888998888874
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=7.2e-30 Score=259.94 Aligned_cols=255 Identities=22% Similarity=0.191 Sum_probs=173.4
Q ss_pred ccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccC
Q 039322 52 TRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRN 131 (708)
Q Consensus 52 ~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n 131 (708)
+.++++++.++. +|..+ .++|++|++++|.+++..+..|.++++|++|+|++|.++++.+..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 445666666655 33333 356777777777777666666777777777777777777776777777777777777777
Q ss_pred c-ceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCC
Q 039322 132 D-FYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLP 210 (708)
Q Consensus 132 ~-l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 210 (708)
. +..+.+..|..+++|++|++++|.++...+..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 666666677777777777777777776666667777777777777777775555566777777777777777776555
Q ss_pred cccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCccc
Q 039322 211 PEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKS 290 (708)
Q Consensus 211 ~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~ 290 (708)
..|..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+..|..+++|+.|++++|++....+.. .-...
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~ 249 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAW 249 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHH
Confidence 56777777777777777777666777777777777777777777655566777777777777777776432221 22234
Q ss_pred CCceecccccccCCCCCccc
Q 039322 291 LEKLNLSHNNLSGSIPNCFE 310 (708)
Q Consensus 291 L~~L~l~~N~l~~~~~~~~~ 310 (708)
++.+..+.+.+.+..|..+.
T Consensus 250 l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 250 LQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp HHHCCSEECCCBEEESGGGT
T ss_pred HHhcccccCccccCCchHhC
Confidence 55556666666666666554
No 307
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=6.4e-34 Score=311.14 Aligned_cols=347 Identities=20% Similarity=0.142 Sum_probs=193.5
Q ss_pred CCCcEEECCCCcccccCCcc-ccCCCCCCEEEeeCceeeee----CCCCCC-CCCcccccccCCCccCCCCcccc-CCC-
Q 039322 2 RSLSILDLNQNQFKGVLPPS-VSNLTNLKELVLLYNNLSGF----IPPSLE-NPMLTRPGLDFNHFTSYLPHNVC-RGG- 73 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~-~~~l~~L~~L~L~~n~i~~~----~~~~~~-~~~l~~l~l~~n~~~~~~~~~~~-~l~- 73 (708)
++|++|||++|+++...... +..+++|++|+|++|.++.. ++..+. .++|+.|++++|.+.+..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45667777777766544333 56667777777777766532 122222 25677777777766553332222 233
Q ss_pred ---CccEEeccCCcccc----ccCccCcCCCCCcEEEccCCccccccccc-----cCCCCCCCEEEcccCcceeeC----
Q 039322 74 ---ALQYFGVSENHFQG----TIPKILRNCSSLIRVRLNSNNLTGNISEA-----LGIYPNLTFIDLSRNDFYGEI---- 137 (708)
Q Consensus 74 ---~L~~L~l~~n~i~~----~~~~~~~~l~~L~~L~l~~n~i~~~~~~~-----~~~~~~L~~L~l~~n~l~~~~---- 137 (708)
+|++|++++|.+++ .++..+.++++|++|+|++|.++...... +...++|++|++++|+++...
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777777663 33566666777777777777766433322 222456777777777665432
Q ss_pred CCCCCCCCCCCEEEcccCcccccCCcccc-----CCCCCCEEeccccccccc----CCcccCCCCCCCEEEccCcccccc
Q 039322 138 SSNWGKCPKLGTLNVSMNNITGGIPREIG-----NSSQLQALDLSLNHIVGE----IPKELGKLNSLTELILRGNQFTGR 208 (708)
Q Consensus 138 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~-----~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~ 208 (708)
+..+..+++|++|++++|.++...+..+. ..++|++|+|++|.++.. ++..+..+++|++|++++|.+++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 23344556677777777766544333332 245666777776666642 244455566666666666666532
Q ss_pred C-----CcccCCCCCCCeEeccCCccccc----CCCCCCccccceeecccCcccccCCChhhhhh-----cccchhhccc
Q 039322 209 L-----PPEIGSLVDLEYLDLSANRFNNS----VPENLGNLLKLHYLGLSNNQFVLELPKELEKL-----VQLSELDASH 274 (708)
Q Consensus 209 ~-----~~~~~~~~~L~~L~l~~N~i~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~ls~ 274 (708)
. +..+..+++|++|++++|.++.. .+..+..+++|+.|++++|.++...+..+... ++|+.|++++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 322 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 322 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCC
Confidence 1 12223456666666666666643 33444556666666666666654444444332 4666666666
Q ss_pred ccCCCC----CchhhcCcccCCceecccccccCCCCCcccc-----cccccEEecCCCcCCC----CCC-CccccccCcc
Q 039322 275 NLFGGE----IPFQICSLKSLEKLNLSHNNLSGSIPNCFEG-----IRGISVIDISDNQLQG----PVP-NSTAFRNAPV 340 (708)
Q Consensus 275 N~i~~~----~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~l~l~~N~l~~----~~~-~~~~~~~~~~ 340 (708)
|.+++. .+..+..+++|+.|++++|++++..+..+.. .++|+.|++++|.+++ .++ .....+.++.
T Consensus 323 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~ 402 (461)
T 1z7x_W 323 CSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRE 402 (461)
T ss_dssp SCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCE
T ss_pred CCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccE
Confidence 666643 2334445566666666666665443333322 4566666666666653 222 1233455666
Q ss_pred cccccccC
Q 039322 341 EALKGNKG 348 (708)
Q Consensus 341 ~~~~~n~~ 348 (708)
+.+.+|+.
T Consensus 403 L~l~~N~i 410 (461)
T 1z7x_W 403 LDLSNNCL 410 (461)
T ss_dssp EECCSSSC
T ss_pred EECCCCCC
Confidence 66666643
No 308
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=7e-34 Score=310.82 Aligned_cols=328 Identities=18% Similarity=0.180 Sum_probs=264.8
Q ss_pred CCCCcEEECCCCccccc----CCccccCCCCCCEEEeeCceeeeeCCCCC----CC--CCcccccccCCCccC----CCC
Q 039322 1 MRSLSILDLNQNQFKGV----LPPSVSNLTNLKELVLLYNNLSGFIPPSL----EN--PMLTRPGLDFNHFTS----YLP 66 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~~----~~--~~l~~l~l~~n~~~~----~~~ 66 (708)
+++|++|+|++|+++.. .+..+..+++|++|+|++|.+....+..+ .. ++|+.|++++|.++. .++
T Consensus 27 ~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~ 106 (461)
T 1z7x_W 27 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLS 106 (461)
T ss_dssp HTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred cCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHH
Confidence 47899999999999853 36678889999999999999876433222 21 269999999999985 458
Q ss_pred ccccCCCCccEEeccCCccccccCccCc-----CCCCCcEEEccCCcccccc----ccccCCCCCCCEEEcccCcceeeC
Q 039322 67 HNVCRGGALQYFGVSENHFQGTIPKILR-----NCSSLIRVRLNSNNLTGNI----SEALGIYPNLTFIDLSRNDFYGEI 137 (708)
Q Consensus 67 ~~~~~l~~L~~L~l~~n~i~~~~~~~~~-----~l~~L~~L~l~~n~i~~~~----~~~~~~~~~L~~L~l~~n~l~~~~ 137 (708)
..+..+++|++|++++|.+++..+..+. ..++|++|+|++|+++... +..+..+++|++|++++|.++...
T Consensus 107 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 186 (461)
T 1z7x_W 107 STLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAG 186 (461)
T ss_dssp HHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHH
Confidence 8889999999999999999865544333 3678999999999999644 556777899999999999987654
Q ss_pred CCCCC-----CCCCCCEEEcccCccccc----CCccccCCCCCCEEecccccccccC-----CcccCCCCCCCEEEccCc
Q 039322 138 SSNWG-----KCPKLGTLNVSMNNITGG----IPREIGNSSQLQALDLSLNHIVGEI-----PKELGKLNSLTELILRGN 203 (708)
Q Consensus 138 ~~~~~-----~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~l~~n 203 (708)
...+. ..++|++|++++|.++.. .+..+..+++|++|+|++|++++.. +..+..+++|++|++++|
T Consensus 187 ~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n 266 (461)
T 1z7x_W 187 VRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWEC 266 (461)
T ss_dssp HHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCC
Confidence 44443 356999999999999864 4667788999999999999998543 223446899999999999
Q ss_pred ccccc----CCcccCCCCCCCeEeccCCcccccCCCCCCc-----cccceeecccCcccccC----CChhhhhhcccchh
Q 039322 204 QFTGR----LPPEIGSLVDLEYLDLSANRFNNSVPENLGN-----LLKLHYLGLSNNQFVLE----LPKELEKLVQLSEL 270 (708)
Q Consensus 204 ~l~~~----~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~-----l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L 270 (708)
.++.. ++..+..+++|++|+|++|.+++..+..+.. .++|+.|++++|.+++. .+..+..+++|+.|
T Consensus 267 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L 346 (461)
T 1z7x_W 267 GITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLEL 346 (461)
T ss_dssp CCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEE
T ss_pred CCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEE
Confidence 99853 5667778999999999999998654444433 36999999999999865 35567778999999
Q ss_pred hcccccCCCCCchhhcC-----cccCCceecccccccC----CCCCcccccccccEEecCCCcCCCC
Q 039322 271 DASHNLFGGEIPFQICS-----LKSLEKLNLSHNNLSG----SIPNCFEGIRGISVIDISDNQLQGP 328 (708)
Q Consensus 271 ~ls~N~i~~~~~~~~~~-----~~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~l~l~~N~l~~~ 328 (708)
++++|.+++..+..+.. .++|+.|++++|++++ .++..+..+++|+.|++++|++++.
T Consensus 347 ~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 347 QISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp ECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred EccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 99999998765555543 6799999999999985 6778888899999999999999853
No 309
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.7e-32 Score=299.86 Aligned_cols=237 Identities=20% Similarity=0.182 Sum_probs=180.2
Q ss_pred CCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEE
Q 039322 71 RGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTL 150 (708)
Q Consensus 71 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 150 (708)
..++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+ |..+++|++|+|++|.++++.+. ++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~-----~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG-----PSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC-----TTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC-----CCcCEE
Confidence 33478999999999988777888889999999999999887665 88888999999999988876543 788888
Q ss_pred EcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccC-CCCCCCeEeccCCcc
Q 039322 151 NVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIG-SLVDLEYLDLSANRF 229 (708)
Q Consensus 151 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~~~~L~~L~l~~N~i 229 (708)
++++|.|++..+. .+++|+.|+|++|.+++..+..++.+++|+.|+|++|.+++..|..+. .+++|++|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 8888888866554 347788888888888877777788888888888888888877777765 678888888888888
Q ss_pred cccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceeccccccc-CCCCCc
Q 039322 230 NNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLS-GSIPNC 308 (708)
Q Consensus 230 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~-~~~~~~ 308 (708)
++..+ +..+++|+.|+|++|.|++..+. |..+++|+.|+|++|.+++ +|..+..+++|+.|++++|++. +.+|..
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 85532 33477888888888888754443 7777778888888887773 4555667777777777777776 344555
Q ss_pred ccccccccEEecC
Q 039322 309 FEGIRGISVIDIS 321 (708)
Q Consensus 309 ~~~l~~L~~l~l~ 321 (708)
+..++.|+.++++
T Consensus 258 ~~~l~~L~~l~~~ 270 (487)
T 3oja_A 258 FSKNQRVQTVAKQ 270 (487)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HHhCCCCcEEecc
Confidence 5556666555553
No 310
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=3.3e-30 Score=266.47 Aligned_cols=255 Identities=19% Similarity=0.154 Sum_probs=198.4
Q ss_pred ccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcc
Q 039322 54 PGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDF 133 (708)
Q Consensus 54 l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l 133 (708)
++++.+.+...+...+..+++|++|++++|.+++..|..|.++++|++|+|++|.+++..+ |..+++|++|++++|++
T Consensus 15 ~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l 92 (317)
T 3o53_A 15 EKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV 92 (317)
T ss_dssp ESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEE
T ss_pred eeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcc
Confidence 4555666655455555566788888888888887777788888888888888888886654 88888888888888888
Q ss_pred eeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCccc
Q 039322 134 YGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEI 213 (708)
Q Consensus 134 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 213 (708)
+++.+ .++|+.|++++|+|++..+.. +++|++|++++|++++..+..+..+++|++|+|++|.+++..+..+
T Consensus 93 ~~l~~-----~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 164 (317)
T 3o53_A 93 QELLV-----GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164 (317)
T ss_dssp EEEEE-----CTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred ccccC-----CCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHH
Confidence 76653 378888888888888665443 5778888888888887767778888888888888888887666666
Q ss_pred C-CCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCC
Q 039322 214 G-SLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLE 292 (708)
Q Consensus 214 ~-~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~ 292 (708)
. .+++|++|+|++|.|++. +. ...+++|+.|++++|++++.. ..|..+++|+.|++++|+|+ .+|..+..+++|+
T Consensus 165 ~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~ 240 (317)
T 3o53_A 165 AASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLE 240 (317)
T ss_dssp GGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCC
T ss_pred hhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCccc-chhhHhhcCCCCC
Confidence 3 678888888888888855 32 234788888888888888544 44888888888888888888 4566777888888
Q ss_pred ceeccccccc-CCCCCcccccccccEEecCC
Q 039322 293 KLNLSHNNLS-GSIPNCFEGIRGISVIDISD 322 (708)
Q Consensus 293 ~L~l~~N~l~-~~~~~~~~~l~~L~~l~l~~ 322 (708)
.|++++|++. +..+..+..++.|+.+++++
T Consensus 241 ~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~ 271 (317)
T 3o53_A 241 HFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (317)
T ss_dssp EEECTTCCCBHHHHHHHHHTCHHHHHHHHHH
T ss_pred EEEccCCCccCcCHHHHHhccccceEEECCC
Confidence 8888888887 56677777888888888873
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=3.9e-30 Score=265.85 Aligned_cols=267 Identities=23% Similarity=0.217 Sum_probs=168.3
Q ss_pred CcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCC
Q 039322 4 LSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSEN 83 (708)
Q Consensus 4 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n 83 (708)
++.++++.+.+.......+..+++|++|+|++|++++ ..+..+..+++|++|++++|
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~-----------------------~~~~~~~~l~~L~~L~Ls~n 68 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQ-----------------------ISAADLAPFTKLELLNLSSN 68 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCC-----------------------CCHHHHTTCTTCCEEECTTS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCc-----------------------CCHHHhhCCCcCCEEECCCC
Confidence 4445555555555555555555566666666666654 34455666667777777777
Q ss_pred ccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCc
Q 039322 84 HFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPR 163 (708)
Q Consensus 84 ~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 163 (708)
.+++..+ +..+++|++|+|++|.++++.. .++|++|++++|+++++.+.. +++|+.|++++|+++...+.
T Consensus 69 ~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~-----~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~ 138 (317)
T 3o53_A 69 VLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDL 138 (317)
T ss_dssp CCEEEEE--ETTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGB
T ss_pred cCCcchh--hhhcCCCCEEECcCCccccccC-----CCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccch
Confidence 7765443 6667777777777777665432 267777777777776655443 45677777777777766666
Q ss_pred cccCCCCCCEEecccccccccCCcccC-CCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCcccc
Q 039322 164 EIGNSSQLQALDLSLNHIVGEIPKELG-KLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLK 242 (708)
Q Consensus 164 ~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~ 242 (708)
.|..+++|++|+|++|++++..+..+. .+++|++|+|++|.+++. + ....+++|++|+|++|+|++. |..+..+++
T Consensus 139 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~ 215 (317)
T 3o53_A 139 DEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAG 215 (317)
T ss_dssp CTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTT
T ss_pred hhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCc
Confidence 666677777777777777655555543 566777777777777644 2 223466777777777777643 334666777
Q ss_pred ceeecccCcccccCCChhhhhhcccchhhcccccCC-CCCchhhcCcccCCceecccc-cccCCCCC
Q 039322 243 LHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFG-GEIPFQICSLKSLEKLNLSHN-NLSGSIPN 307 (708)
Q Consensus 243 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~-~~~~~~~~~~~~L~~L~l~~N-~l~~~~~~ 307 (708)
|+.|++++|+++ .+|..+..+++|+.|++++|++. +..+..+..+++|+.|++++| .+++..+.
T Consensus 216 L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 216 VTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred ccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 777777777776 34555666677777777777776 455666666777777777733 45544443
No 312
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.1e-28 Score=252.42 Aligned_cols=219 Identities=21% Similarity=0.283 Sum_probs=118.0
Q ss_pred CCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCC
Q 039322 65 LPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKC 144 (708)
Q Consensus 65 ~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 144 (708)
+|..+..+++|++|+|++|.++ .+|..+.++++|++|+|++|.++ ..+..|..+++|++|++++|++.+..+..+..
T Consensus 96 lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~- 172 (328)
T 4fcg_A 96 FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAS- 172 (328)
T ss_dssp CCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEE-
T ss_pred cChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhh-
Confidence 3444445555555555555555 45555555555555555555555 22444555555555555555444444433322
Q ss_pred CCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEec
Q 039322 145 PKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDL 224 (708)
Q Consensus 145 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l 224 (708)
. ..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 173 -----~---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 173 -----T---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDL 236 (328)
T ss_dssp -----E---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEEC
T ss_pred -----c---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEEC
Confidence 0 00011223555555555555555 44555555555555555555555 34444555555666666
Q ss_pred cCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceeccccccc
Q 039322 225 SANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLS 302 (708)
Q Consensus 225 ~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 302 (708)
++|.+.+..|..+..+++|+.|++++|.+.+.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 665555555555555666666666665555555555666666666666666655556666666666666666555444
No 313
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.1e-28 Score=253.63 Aligned_cols=227 Identities=19% Similarity=0.241 Sum_probs=183.2
Q ss_pred CCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEec
Q 039322 97 SSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDL 176 (708)
Q Consensus 97 ~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 176 (708)
++++.|+|++|.++.+ +..+..+++|++|+|++|.++ ..+..+..+++|++|+|++|.++ .+|..|..+++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~~l-p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLPQF-PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCSSC-CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCchhc-ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 5566666666666633 333445666666666666665 44455666666666666666666 45666666666777777
Q ss_pred ccccccccCCccc---------CCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeec
Q 039322 177 SLNHIVGEIPKEL---------GKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLG 247 (708)
Q Consensus 177 ~~n~l~~~~~~~~---------~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~ 247 (708)
++|++.+.+|..+ .++++|++|+|++|+++ .+|..+..+++|++|+|++|++++ .|..+..+++|+.|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 6666655555554 45999999999999999 888899999999999999999995 566799999999999
Q ss_pred ccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCC
Q 039322 248 LSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQG 327 (708)
Q Consensus 248 l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 327 (708)
+++|.+.+..|..|.++++|+.|+|++|.+.+..|..+..+++|+.|+|++|++.+.+|..+..+++|+.+++..|.+..
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887775
Q ss_pred C
Q 039322 328 P 328 (708)
Q Consensus 328 ~ 328 (708)
.
T Consensus 316 l 316 (328)
T 4fcg_A 316 L 316 (328)
T ss_dssp -
T ss_pred H
Confidence 4
No 314
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=3.4e-30 Score=285.44 Aligned_cols=188 Identities=19% Similarity=0.148 Sum_probs=133.0
Q ss_pred eccccCccEEEE-EeCCCcEEEEEEcCCCCCc------chhHhHHHHHHHHHHHHhc-cCCceeeEEEEEeeCCeeEEEE
Q 039322 444 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPC------DQIADQKEFLIEVKALTEI-RHRNIVKFYGFCSHARHSFLVY 515 (708)
Q Consensus 444 ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~------~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~ 515 (708)
.+.|+.|.+..+ +...|+.||||++.+.... ......++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 455666655554 2335888999999764321 1123356799999999999 6999999999999999999999
Q ss_pred EeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCC
Q 039322 516 ELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPE 595 (708)
Q Consensus 516 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 595 (708)
||++|++|.+++...+ .++.. +|+.||+.||+|+|++ |||||||||+|||++.++.+||+|||+|+....+
T Consensus 322 Eyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999997654 35543 5899999999999999 9999999999999999999999999999877665
Q ss_pred CCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 039322 596 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641 (708)
Q Consensus 596 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p 641 (708)
.......+||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 556667789999999999875 467789999999998877665444
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=9.1e-28 Score=267.61 Aligned_cols=259 Identities=25% Similarity=0.297 Sum_probs=137.2
Q ss_pred CcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCC
Q 039322 4 LSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSEN 83 (708)
Q Consensus 4 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n 83 (708)
++.|++++|.|+. .|..+. ++|++|+|++|.|+. +| . .+++|++|+|++|
T Consensus 42 l~~L~ls~n~L~~-lp~~l~--~~L~~L~L~~N~l~~-lp-----------------------~---~l~~L~~L~Ls~N 91 (622)
T 3g06_A 42 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLTS-LP-----------------------A---LPPELRTLEVSGN 91 (622)
T ss_dssp CCEEECCSSCCSC-CCSCCC--TTCSEEEECSCCCSC-CC-----------------------C---CCTTCCEEEECSC
T ss_pred CcEEEecCCCcCc-cChhhC--CCCcEEEecCCCCCC-CC-----------------------C---cCCCCCEEEcCCC
Confidence 5566666666663 333332 566666666666653 22 2 2345555555555
Q ss_pred ccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCc
Q 039322 84 HFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPR 163 (708)
Q Consensus 84 ~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 163 (708)
+|++ +|. .+++|++|+|++|+|++++. .+++|++|++++|+++.+.. .+++|++|+|++|+|++. |.
T Consensus 92 ~l~~-lp~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~l-~~ 158 (622)
T 3g06_A 92 QLTS-LPV---LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASL-PA 158 (622)
T ss_dssp CCSC-CCC---CCTTCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCC-CC
T ss_pred cCCc-CCC---CCCCCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCCc-CC
Confidence 5552 332 44555555555555554433 34555555555555554332 125555666666655532 22
Q ss_pred cccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccc
Q 039322 164 EIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKL 243 (708)
Q Consensus 164 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L 243 (708)
.+++|+.|++++|+|++ +| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++. .|.. +++|
T Consensus 159 ---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L 223 (622)
T 3g06_A 159 ---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGL 223 (622)
T ss_dssp ---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTC
T ss_pred ---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCC
Confidence 23455566666665553 23 234556666666666553 2221 2456666666666652 2321 2456
Q ss_pred eeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCC
Q 039322 244 HYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDN 323 (708)
Q Consensus 244 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 323 (708)
+.|++++|+|++ +| ..+++|+.|+|++|.|+. +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|++++|
T Consensus 224 ~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N 294 (622)
T 3g06_A 224 KELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGN 294 (622)
T ss_dssp CEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSC
T ss_pred CEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCC
Confidence 666666666653 23 233556666666666653 332 4456666666666666 44555666666666666666
Q ss_pred cCCCCC
Q 039322 324 QLQGPV 329 (708)
Q Consensus 324 ~l~~~~ 329 (708)
++++..
T Consensus 295 ~l~~~~ 300 (622)
T 3g06_A 295 PLSERT 300 (622)
T ss_dssp CCCHHH
T ss_pred CCCCcC
Confidence 666543
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2.7e-29 Score=274.54 Aligned_cols=246 Identities=19% Similarity=0.191 Sum_probs=182.2
Q ss_pred CCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 039322 95 NCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQAL 174 (708)
Q Consensus 95 ~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 174 (708)
.+++|++|+|++|.++++.+..|..+++|++|+|++|.+++..+ |..+++|++|+|++|.|++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 44578888888888888877888888888888888888876665 7788888888888888875432 3778888
Q ss_pred ecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCC-ccccceeecccCccc
Q 039322 175 DLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLG-NLLKLHYLGLSNNQF 253 (708)
Q Consensus 175 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~-~l~~L~~L~l~~n~l 253 (708)
+|++|.|++..+. .+++|+.|+|++|.+++..|..+..+++|++|+|++|.+++..|..+. .+++|+.|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 8888888755443 357788888888888877777788888888888888888877777665 678888888888888
Q ss_pred ccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCC-CCC-
Q 039322 254 VLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGP-VPN- 331 (708)
Q Consensus 254 ~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~-~~~- 331 (708)
++..+ +..+++|+.|+|++|.|++..+ .+..+++|+.|++++|.+++ +|..+..+++|+.|++++|++.|. +|.
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 75532 3347788888888888885444 47778888888888888884 566677788888888888888732 221
Q ss_pred ccccccCcccccc-------cccCcCCCCC
Q 039322 332 STAFRNAPVEALK-------GNKGLCGGVK 354 (708)
Q Consensus 332 ~~~~~~~~~~~~~-------~n~~~c~~~~ 354 (708)
...++.+..+.+. .+++.|.|+.
T Consensus 258 ~~~l~~L~~l~~~~~~~~~~~~~~~c~~~~ 287 (487)
T 3oja_A 258 FSKNQRVQTVAKQTVKKLTGQNEEECTVPT 287 (487)
T ss_dssp HTTCHHHHHHHHHHHHHHTSSSSCCCSSTT
T ss_pred HHhCCCCcEEeccccccccCCCcccccCCc
Confidence 2233334444444 7788887753
No 317
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=5.7e-30 Score=264.01 Aligned_cols=249 Identities=21% Similarity=0.196 Sum_probs=112.2
Q ss_pred cCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccC-CCCcccc-------CCCCccEEeccCCccccccCccC-
Q 039322 23 SNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTS-YLPHNVC-------RGGALQYFGVSENHFQGTIPKIL- 93 (708)
Q Consensus 23 ~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~-------~l~~L~~L~l~~n~i~~~~~~~~- 93 (708)
.+.++|+.|++++|.+ .+|..+.. .|+.|++++|.+.. ..+..+. .+++|++|++++|.+++..|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~-~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTD-IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHH-HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred ccCCCceeEeeccccc--ccHHHHHH-HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 3444455555555555 22222211 15555555555422 2232222 34455555555555554444443
Q ss_pred -cCCCCCcEEEccCCccccccccccCCC-----CCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCccccc--CCccc
Q 039322 94 -RNCSSLIRVRLNSNNLTGNISEALGIY-----PNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGG--IPREI 165 (708)
Q Consensus 94 -~~l~~L~~L~l~~n~i~~~~~~~~~~~-----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~--~~~~~ 165 (708)
..+++|++|+|++|+++++ +..+..+ ++|++|+|++|+++++.+..|..+++|++|+|++|++.+. .+..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 4455555555555555544 3333333 4455555555555444444444455555555555544322 11111
Q ss_pred cCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccc---cCCcccCCCCCCCeEeccCCcccccCC-CCCCccc
Q 039322 166 GNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTG---RLPPEIGSLVDLEYLDLSANRFNNSVP-ENLGNLL 241 (708)
Q Consensus 166 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---~~~~~~~~~~~L~~L~l~~N~i~~~~~-~~~~~l~ 241 (708)
.+..+++|++|+|++|++++ .....+..+++|++|+|++|++++..| ..+..++
T Consensus 196 ----------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 196 ----------------------CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp ----------------------CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred ----------------------HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 11444445555555544441 111122334455555555555544332 2333344
Q ss_pred cceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceeccccccc
Q 039322 242 KLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLS 302 (708)
Q Consensus 242 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 302 (708)
+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|++++|+++
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 5555555555554 3333333 4555555555555533 33 445555555555555554
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=4.3e-27 Score=262.15 Aligned_cols=258 Identities=23% Similarity=0.243 Sum_probs=207.6
Q ss_pred cccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEccc
Q 039322 51 LTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSR 130 (708)
Q Consensus 51 l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~ 130 (708)
++.|++++|.++. +|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+.++. .+++|++|+|++
T Consensus 42 l~~L~ls~n~L~~-lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSSCCSC-CCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEEECS
T ss_pred CcEEEecCCCcCc-cChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEECcC
Confidence 3344444444443 444444 78999999999999 4554 57999999999999997665 679999999999
Q ss_pred CcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCC
Q 039322 131 NDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLP 210 (708)
Q Consensus 131 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 210 (708)
|+++++.. .+++|+.|++++|+|+. +|.. +++|++|+|++|++++ +|. .+++|+.|++++|.+++ +|
T Consensus 111 N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~ 177 (622)
T 3g06_A 111 NPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP 177 (622)
T ss_dssp CCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC
T ss_pred CcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc
Confidence 99987654 57899999999999995 4433 4899999999999984 343 35789999999999994 55
Q ss_pred cccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCccc
Q 039322 211 PEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKS 290 (708)
Q Consensus 211 ~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~ 290 (708)
..+++|+.|++++|.|++ +|.. +++|+.|++++|.++. +|.. +++|+.|++++|.|++ +| ..+++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~ 242 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSE 242 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTT
T ss_pred ---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCc
Confidence 457899999999999995 4433 4789999999999994 4432 4789999999999995 44 45689
Q ss_pred CCceecccccccCCCCCcccccccccEEecCCCcCCCCCCCccccccCcccccccccCcCC
Q 039322 291 LEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVPNSTAFRNAPVEALKGNKGLCG 351 (708)
Q Consensus 291 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~ 351 (708)
|+.|++++|+|+. +|. .+++|+.|++++|.++..++....+++++.+.+.+|++...
T Consensus 243 L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l~~~ 299 (622)
T 3g06_A 243 LKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSER 299 (622)
T ss_dssp CCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCCCHH
T ss_pred CcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCCCCc
Confidence 9999999999994 454 56899999999999997765567788899999999987653
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.3e-30 Score=263.68 Aligned_cols=250 Identities=17% Similarity=0.176 Sum_probs=199.8
Q ss_pred ccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCcccc-ccccccC-------CCCCCCEEEcccCcceeeCCCC
Q 039322 69 VCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTG-NISEALG-------IYPNLTFIDLSRNDFYGEISSN 140 (708)
Q Consensus 69 ~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~~~~~-------~~~~L~~L~l~~n~l~~~~~~~ 140 (708)
++..++|++|++++|.+ .+|..+... |++|+|++|.++. ..+..+. .+++|++|+|++|++++..+..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 44556788888888888 556655543 8888888888853 2333333 6889999999999998777776
Q ss_pred C--CCCCCCCEEEcccCcccccCCccccCC-----CCCCEEecccccccccCCcccCCCCCCCEEEccCcccccc--CCc
Q 039322 141 W--GKCPKLGTLNVSMNNITGGIPREIGNS-----SQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGR--LPP 211 (708)
Q Consensus 141 ~--~~l~~L~~L~L~~N~i~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~ 211 (708)
+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+..|+.+++|++|+|++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 8889999999999999876 7777776 8999999999999987778899999999999999997654 233
Q ss_pred cc--CCCCCCCeEeccCCccccc---CCCCCCccccceeecccCcccccCCC-hhhhhhcccchhhcccccCCCCCchhh
Q 039322 212 EI--GSLVDLEYLDLSANRFNNS---VPENLGNLLKLHYLGLSNNQFVLELP-KELEKLVQLSELDASHNLFGGEIPFQI 285 (708)
Q Consensus 212 ~~--~~~~~L~~L~l~~N~i~~~---~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~ls~N~i~~~~~~~~ 285 (708)
.+ ..+++|++|+|++|+|++. ....+..+++|+.|++++|++++..| ..+..+++|+.|+|++|.|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 7889999999999999832 12334567899999999999997664 45667889999999999998 666665
Q ss_pred cCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCC
Q 039322 286 CSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGP 328 (708)
Q Consensus 286 ~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 328 (708)
. ++|++|++++|++++. |. +..+++|+.|++++|++++.
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 5 8899999999999966 55 88999999999999999864
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=7.3e-27 Score=236.49 Aligned_cols=229 Identities=25% Similarity=0.239 Sum_probs=143.5
Q ss_pred EEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCc
Q 039322 77 YFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNN 156 (708)
Q Consensus 77 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 156 (708)
.+++++..++ .+|..+. ++|++|+|++|+++++.+..|..+++|++|++++|+++.+.+..|..+++|++|+|++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4555555555 4444443 456666666666666555566666666666666666665555555556666666666666
Q ss_pred ccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCccccc-CCC
Q 039322 157 ITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNS-VPE 235 (708)
Q Consensus 157 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~-~~~ 235 (708)
+++..+..|..+++|++|++++|++++..+ ..+..+++|++|++++|++++. .|.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~------------------------~~~~~l~~L~~L~l~~n~l~~~~l~~ 143 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLEN------------------------FPIGHLKTLKELNVAHNLIQSFKLPE 143 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTT------------------------CCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCc------------------------hhcccCCCCCEEECcCCccceecCch
Confidence 555555555555555555555555553333 3444455555555555555432 245
Q ss_pred CCCccccceeecccCcccccCCChhhhhhcccc----hhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccc
Q 039322 236 NLGNLLKLHYLGLSNNQFVLELPKELEKLVQLS----ELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEG 311 (708)
Q Consensus 236 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~----~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~ 311 (708)
.+..+++|+.|++++|++++..+..|..+.+|+ .|++++|.+++..+..+ ...+|+.|++++|++++..+..|..
T Consensus 144 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 144 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTT
T ss_pred hhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcc
Confidence 555566666666666666655555666666666 67788888875544444 3457889999999998777777888
Q ss_pred cccccEEecCCCcCCCCCCCcc
Q 039322 312 IRGISVIDISDNQLQGPVPNST 333 (708)
Q Consensus 312 l~~L~~l~l~~N~l~~~~~~~~ 333 (708)
+++|+.|++++|+++|.++...
T Consensus 223 l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 223 LTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCSCCEEECCSSCBCCCTTTTH
T ss_pred cccccEEEccCCcccccCCchH
Confidence 9999999999999998877543
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=9.5e-27 Score=235.64 Aligned_cols=221 Identities=19% Similarity=0.176 Sum_probs=179.5
Q ss_pred ccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcc
Q 039322 54 PGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDF 133 (708)
Q Consensus 54 l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l 133 (708)
.+.....+.. +|..+. ++|++|++++|++++..+..|.++++|++|+|++|.++++.+..|..+++|++|+|++|++
T Consensus 12 ~~c~~~~l~~-ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCSS-CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCccc-cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 3444445544 455543 5799999999999988888999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEeccccccccc-CCcccCCCCCCCEEEccCccccccCCcc
Q 039322 134 YGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGE-IPKELGKLNSLTELILRGNQFTGRLPPE 212 (708)
Q Consensus 134 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 212 (708)
+++.+..|..+++|++|++++|.++...+..+..+++|++|+|++|++++. +|..+..+++|++|++++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 999999999999999999999999988777899999999999999999864 4788889999999999999998777777
Q ss_pred cCCCCCCC----eEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCC
Q 039322 213 IGSLVDLE----YLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFG 278 (708)
Q Consensus 213 ~~~~~~L~----~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~ 278 (708)
+..+++|+ .|++++|++++..+..+.. .+|+.|++++|++++..+..|..+++|+.|++++|++.
T Consensus 169 ~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp GHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred hhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 77776666 7777888777554444433 36777777777776555555566666666666666665
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.5e-25 Score=225.84 Aligned_cols=201 Identities=22% Similarity=0.222 Sum_probs=118.0
Q ss_pred CccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcc
Q 039322 74 ALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVS 153 (708)
Q Consensus 74 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 153 (708)
+++.++++++.++ .+|..+. ++|++|+|++|+++++.+..|..+++|++|+|++|+++.+.+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4566777777776 3454443 466666777666666666666666666666666666666666666666666666666
Q ss_pred cCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccC
Q 039322 154 MNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSV 233 (708)
Q Consensus 154 ~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~ 233 (708)
+|.++...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 66666555555666666666666666666555555555666666666666655444444555555555555555555444
Q ss_pred CCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccC
Q 039322 234 PENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLF 277 (708)
Q Consensus 234 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i 277 (708)
+..|..+++|+.|++++|+++...+..|..+++|+.|+|++|++
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCe
Confidence 44455555555555555555544444444444444444444444
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.7e-25 Score=225.47 Aligned_cols=206 Identities=22% Similarity=0.225 Sum_probs=115.5
Q ss_pred CCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecc
Q 039322 98 SLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLS 177 (708)
Q Consensus 98 ~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 177 (708)
+.+++++++++++.++.. + .++|++|+|++|+++.+.+..|..+++|++|+|++|.|+...+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~ip~~-~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSN-I--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSSCCSC-C--CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCccCCC-C--CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 456667776666654332 1 1456666666666666655566666666666666666665555555666666666666
Q ss_pred cccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCC
Q 039322 178 LNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLEL 257 (708)
Q Consensus 178 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 257 (708)
+|+++...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|++++|+++...
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 66666444445555556666666665555544445555555555555555555444444455555555555555554433
Q ss_pred ChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCC
Q 039322 258 PKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVP 330 (708)
Q Consensus 258 ~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 330 (708)
+..+..+++|+.|++++|++++..+..|..+++|+.|++++|++.+.++
T Consensus 174 ------------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 ------------------------EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp ------------------------TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ------------------------hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 3344445555555555555554444445555555566666555555443
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.8e-25 Score=225.40 Aligned_cols=207 Identities=19% Similarity=0.175 Sum_probs=117.9
Q ss_pred ccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCC
Q 039322 69 VCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLG 148 (708)
Q Consensus 69 ~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 148 (708)
+..+++|+.|++++|.++.. ..+..+++|++|+|++|.++++ ..+..+++|++|++++|+++++.+..|..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 33456666666666666532 2356666666666666666643 2556666666666666666655555566666666
Q ss_pred EEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCc
Q 039322 149 TLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANR 228 (708)
Q Consensus 149 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~ 228 (708)
+|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|++++|++++..+..|..+++|++|+|++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 66666666665555555666666666666666665444445555666666666666655444445555556666666665
Q ss_pred ccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhc
Q 039322 229 FNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQIC 286 (708)
Q Consensus 229 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~ 286 (708)
+++..+..+..+++|+.|++++|.+.+. +++|+.|+++.|.+++.+|..++
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccc
Confidence 5555554455555555555555555422 22344444444444444444433
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=3e-25 Score=225.61 Aligned_cols=205 Identities=24% Similarity=0.225 Sum_probs=101.9
Q ss_pred CcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCC
Q 039322 93 LRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQ 172 (708)
Q Consensus 93 ~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 172 (708)
++++++++++++++|.++.++.... +++++|+|++|+++++.+..|..+++|+.|+|++|.|+...+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCcCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 4455666666666666664443321 4555666666655555555555555555555555555543221 4445555
Q ss_pred EEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcc
Q 039322 173 ALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQ 252 (708)
Q Consensus 173 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~ 252 (708)
+|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~------------------- 140 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP------------------- 140 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCC-------------------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccC-------------------
Confidence 5555555554 33444444455555555555554443344444444444444444444433
Q ss_pred cccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCC
Q 039322 253 FVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGP 328 (708)
Q Consensus 253 l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 328 (708)
+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.+++++|++.|.
T Consensus 141 -----~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 141 -----PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp -----TTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred -----hhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 334444444444444444444333333444455555555555554 3344444444555555555555443
No 326
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=6.3e-25 Score=223.17 Aligned_cols=205 Identities=24% Similarity=0.255 Sum_probs=171.0
Q ss_pred ccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCC
Q 039322 67 HNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPK 146 (708)
Q Consensus 67 ~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 146 (708)
..+..+++++++++++|.++ .+|..+. ++++.|+|++|.++++.+..|..+++|++|+|++|.++.+... ..+++
T Consensus 4 C~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~ 78 (290)
T 1p9a_G 4 CEVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPV 78 (290)
T ss_dssp SEEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTT
T ss_pred ccccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCc
Confidence 34667788999999999998 5565554 6889999999999988888899999999999999999877654 68899
Q ss_pred CCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccC
Q 039322 147 LGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSA 226 (708)
Q Consensus 147 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 226 (708)
|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 999999999998 5677888899999999999999977778899999999999999999977777788899999999999
Q ss_pred CcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCC
Q 039322 227 NRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFG 278 (708)
Q Consensus 227 N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~ 278 (708)
|+|+...+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 9998766667788888888888888888 55665666667777777777765
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=5.2e-25 Score=222.09 Aligned_cols=225 Identities=17% Similarity=0.215 Sum_probs=174.5
Q ss_pred EEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCcc
Q 039322 6 ILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHF 85 (708)
Q Consensus 6 ~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i 85 (708)
.+++.++.++.. ..+..+++|+.|++++|.+.. ...+..+++|++|++++|.+
T Consensus 23 ~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-------------------------~~~l~~l~~L~~L~l~~n~l 75 (272)
T 3rfs_A 23 KANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-------------------------VQGIQYLPNVRYLALGGNKL 75 (272)
T ss_dssp HHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-------------------------CTTGGGCTTCCEEECTTSCC
T ss_pred HHHhcCcccccc--cccccccceeeeeeCCCCccc-------------------------ccccccCCCCcEEECCCCCC
Confidence 345556666533 446778899999999998863 12356677888888888888
Q ss_pred ccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccc
Q 039322 86 QGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREI 165 (708)
Q Consensus 86 ~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~ 165 (708)
++. ..+.++++|++|+|++|.++++.+..|..+++|++|++++|+++++.+..|..+++|++|++++|++++..+..|
T Consensus 76 ~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 153 (272)
T 3rfs_A 76 HDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVF 153 (272)
T ss_dssp CCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHh
Confidence 753 467788888888888888888777778888888888888888887777778888888888888888887777777
Q ss_pred cCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCcccccee
Q 039322 166 GNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHY 245 (708)
Q Consensus 166 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~ 245 (708)
..+++|++|+|++|++++..+..+..+++|++|++++|++++..+..+..+++|++|+|++|.+.+. +++|+.
T Consensus 154 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~ 226 (272)
T 3rfs_A 154 DKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRY 226 (272)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHH
T ss_pred ccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHH
Confidence 8888888888888888876666678888888888888888877777788888888888888887633 456888
Q ss_pred ecccCcccccCCChhhhhhcc
Q 039322 246 LGLSNNQFVLELPKELEKLVQ 266 (708)
Q Consensus 246 L~l~~n~l~~~~~~~~~~l~~ 266 (708)
|+++.|.+++.+|..+..+..
T Consensus 227 l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 227 LSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp HHHHHHHTGGGBBCTTSCBCG
T ss_pred HHHHHHhCCCcccCcccccCC
Confidence 888888888888877765443
No 328
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.3e-25 Score=247.46 Aligned_cols=187 Identities=14% Similarity=0.189 Sum_probs=146.7
Q ss_pred cccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcch----hHhHHHHHHHHHHHHhccCCceeeEEEEEeeCCeeEEE
Q 039322 439 DAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQ----IADQKEFLIEVKALTEIRHRNIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 439 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 514 (708)
...+.||+|+||.||+|.. .++.+++|.......... ....+.+.+|++++++++||||+++..++..++..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4466899999999999955 578889988654222111 12245689999999999999999666666677788999
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCC
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKP 594 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 594 (708)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+|+....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999864 558999999999999999 9999999999999998 999999999997754
Q ss_pred CCCc-------cccccccccccCcccccc--CCCCcchhHHHHHHHHHHHHhCCCCC
Q 039322 595 ESSN-------WTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLVLEAIKGKHPR 642 (708)
Q Consensus 595 ~~~~-------~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~ 642 (708)
.... .....||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3221 135679999999999876 55778899999999888888777765
No 329
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=1.5e-24 Score=214.31 Aligned_cols=197 Identities=20% Similarity=0.148 Sum_probs=127.6
Q ss_pred CCCcEEEccCCccccccccccCCCCCCCEEEcccCc-ceeeCCCCCCCCCCCCEEEccc-CcccccCCccccCCCCCCEE
Q 039322 97 SSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRND-FYGEISSNWGKCPKLGTLNVSM-NNITGGIPREIGNSSQLQAL 174 (708)
Q Consensus 97 ~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L 174 (708)
++|++|+|++|+++++.+..|..+++|++|++++|+ ++.+.+..|.++++|++|++++ |+++...+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 367777777777777777677777777777777775 7767666777777777777776 77776666677777777777
Q ss_pred ecccccccccCCcccCCCCCCC---EEEccCc-cccccCCcccCCCCCCC-eEeccCCcccccCCCCCCccccceeeccc
Q 039322 175 DLSLNHIVGEIPKELGKLNSLT---ELILRGN-QFTGRLPPEIGSLVDLE-YLDLSANRFNNSVPENLGNLLKLHYLGLS 249 (708)
Q Consensus 175 ~L~~n~l~~~~~~~~~~l~~L~---~L~l~~n-~l~~~~~~~~~~~~~L~-~L~l~~N~i~~~~~~~~~~l~~L~~L~l~ 249 (708)
++++|++++ +|. +..+++|+ +|++++| .+++..+..|.++++|+ +|++++|+++...+..|.. ++|+.|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 777777764 443 66666666 7777777 66655555666666666 6777666666333333333 566666666
Q ss_pred Ccc-cccCCChhhhhh-cccchhhcccccCCCCCchhhcCcccCCceecccc
Q 039322 250 NNQ-FVLELPKELEKL-VQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHN 299 (708)
Q Consensus 250 ~n~-l~~~~~~~~~~l-~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N 299 (708)
+|+ ++...+..|.++ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 663 665555556666 6666666666666533222 3455555555544
No 330
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=2.6e-26 Score=241.91 Aligned_cols=252 Identities=19% Similarity=0.225 Sum_probs=162.8
Q ss_pred EEeccCCccccccCccCcCCCCCcEEEccCCccccccc----cccCCCC-CCCEEEcccCcceeeCCCCCCCC-----CC
Q 039322 77 YFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNIS----EALGIYP-NLTFIDLSRNDFYGEISSNWGKC-----PK 146 (708)
Q Consensus 77 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~----~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l-----~~ 146 (708)
+++++.|.+++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|+++...+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 34566666666666655555557777777777666555 5566666 67777777777665555444443 67
Q ss_pred CCEEEcccCcccccCCccc----cCC-CCCCEEecccccccccCCcc----cCC-CCCCCEEEccCccccccCC----cc
Q 039322 147 LGTLNVSMNNITGGIPREI----GNS-SQLQALDLSLNHIVGEIPKE----LGK-LNSLTELILRGNQFTGRLP----PE 212 (708)
Q Consensus 147 L~~L~L~~N~i~~~~~~~~----~~l-~~L~~L~L~~n~l~~~~~~~----~~~-l~~L~~L~l~~n~l~~~~~----~~ 212 (708)
|++|+|++|.++...+..+ ..+ ++|++|+|++|++++..+.. +.. .++|++|+|++|.+++... ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 7777777777765544433 333 67777777777776544433 333 2477777777777774332 22
Q ss_pred cCCCC-CCCeEeccCCcccccCCCCCC----cc-ccceeecccCcccccCC----Chhhhhh-cccchhhcccccCCCCC
Q 039322 213 IGSLV-DLEYLDLSANRFNNSVPENLG----NL-LKLHYLGLSNNQFVLEL----PKELEKL-VQLSELDASHNLFGGEI 281 (708)
Q Consensus 213 ~~~~~-~L~~L~l~~N~i~~~~~~~~~----~l-~~L~~L~l~~n~l~~~~----~~~~~~l-~~L~~L~ls~N~i~~~~ 281 (708)
+..++ +|++|+|++|+|++..+..+. .+ ++|+.|+|++|.|+... +..+..+ ++|+.|+|++|.|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34444 788888888877765554333 33 47888888888887543 3344443 47888888888887655
Q ss_pred ch----hhcCcccCCceecccccccCCCC-------CcccccccccEEecCCCcCCCC
Q 039322 282 PF----QICSLKSLEKLNLSHNNLSGSIP-------NCFEGIRGISVIDISDNQLQGP 328 (708)
Q Consensus 282 ~~----~~~~~~~L~~L~l~~N~l~~~~~-------~~~~~l~~L~~l~l~~N~l~~~ 328 (708)
+. .+..+++|+.|++++|.+....+ ..+..+++|+.||+++|++...
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 43 33556888888888888554333 3566788899999999998765
No 331
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2.9e-24 Score=212.26 Aligned_cols=197 Identities=17% Similarity=0.167 Sum_probs=156.6
Q ss_pred CCccEEeccCCccccccCccCcCCCCCcEEEccCCc-cccccccccCCCCCCCEEEccc-CcceeeCCCCCCCCCCCCEE
Q 039322 73 GALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNN-LTGNISEALGIYPNLTFIDLSR-NDFYGEISSNWGKCPKLGTL 150 (708)
Q Consensus 73 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~~~~~~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L 150 (708)
.+|++|++++|++++..+..|.++++|++|++++|+ ++.+.+..|..+++|++|++++ |+++.+.+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 378888888888887777778888888888888886 8888888888888888888888 88888888888888888888
Q ss_pred EcccCcccccCCccccCCCCCC---EEecccc-cccccCCcccCCCCCCC-EEEccCccccccCCcccCCCCCCCeEecc
Q 039322 151 NVSMNNITGGIPREIGNSSQLQ---ALDLSLN-HIVGEIPKELGKLNSLT-ELILRGNQFTGRLPPEIGSLVDLEYLDLS 225 (708)
Q Consensus 151 ~L~~N~i~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 225 (708)
++++|++++ .|. |..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++.+.+..|.. ++|++|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 888888885 444 77788887 8888888 88866667788888888 8888888888554445555 788888888
Q ss_pred CCc-ccccCCCCCCcc-ccceeecccCcccccCCChhhhhhcccchhhcccc
Q 039322 226 ANR-FNNSVPENLGNL-LKLHYLGLSNNQFVLELPKELEKLVQLSELDASHN 275 (708)
Q Consensus 226 ~N~-i~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N 275 (708)
+|+ ++...+..|..+ ++|+.|++++|+++...+. .+++|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 885 887767778888 8888888888888855444 4567777777765
No 332
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=1.6e-23 Score=219.40 Aligned_cols=240 Identities=20% Similarity=0.118 Sum_probs=184.3
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCccee-eCCCCCCCCCCCCE-EEcc
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYG-EISSNWGKCPKLGT-LNVS 153 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~-L~L~ 153 (708)
+.+++++++++ .+|..+. +++++|+|++|+|+.+++++|.++++|++|+|++|++.+ +.+..|.+++++.. +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 57889999998 5676553 689999999999998888899999999999999999744 66678888888775 5667
Q ss_pred cCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccC-ccccccCCcccCCCC-CCCeEeccCCcccc
Q 039322 154 MNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRG-NQFTGRLPPEIGSLV-DLEYLDLSANRFNN 231 (708)
Q Consensus 154 ~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~~~-~L~~L~l~~N~i~~ 231 (708)
+|+|+.+.+..|..+++|++|++++|+++...+..+....++..|++.+ |++..+.+..|..+. .++.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 7999988888999999999999999999866666677777888888865 677766667777765 58889999999985
Q ss_pred cCCCCCCccccceeecccC-cccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccc-cccCCCCCcc
Q 039322 232 SVPENLGNLLKLHYLGLSN-NQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHN-NLSGSIPNCF 309 (708)
Q Consensus 232 ~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N-~l~~~~~~~~ 309 (708)
..+. .....+|+.|++++ |.++.+.++.|.++++|+.|+|++|+|+...+..+.. |+.|.+.++ .++ .+| .+
T Consensus 169 i~~~-~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~-~lP-~l 242 (350)
T 4ay9_X 169 IHNS-AFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLK-KLP-TL 242 (350)
T ss_dssp ECTT-SSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCC-CCC-CT
T ss_pred CChh-hccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcC-cCC-Cc
Confidence 4444 44556888888874 6777666677888999999999999988555544444 444444433 343 455 36
Q ss_pred cccccccEEecCCCc
Q 039322 310 EGIRGISVIDISDNQ 324 (708)
Q Consensus 310 ~~l~~L~~l~l~~N~ 324 (708)
..+++|+.++++++.
T Consensus 243 ~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 243 EKLVALMEASLTYPS 257 (350)
T ss_dssp TTCCSCCEEECSCHH
T ss_pred hhCcChhhCcCCCCc
Confidence 778888888887543
No 333
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.7e-23 Score=206.88 Aligned_cols=176 Identities=21% Similarity=0.219 Sum_probs=79.3
Q ss_pred CcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEeccc
Q 039322 99 LIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSL 178 (708)
Q Consensus 99 L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 178 (708)
.++++++++.++.++.... ++|++|+|++|+++++.+..|..+++|++|+|++|.|++..+..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLDSVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCSSCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCccccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 3455555555554332211 3455555555555544444455555555555555555544444444445555555555
Q ss_pred ccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCC
Q 039322 179 NHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELP 258 (708)
Q Consensus 179 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 258 (708)
|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 55444333444444444444444444443333334444444444444444443333334444444444444444443333
Q ss_pred hhhhhhcccchhhcccccC
Q 039322 259 KELEKLVQLSELDASHNLF 277 (708)
Q Consensus 259 ~~~~~l~~L~~L~ls~N~i 277 (708)
..|..+++|+.|+|++|++
T Consensus 173 ~~~~~l~~L~~L~l~~N~~ 191 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQF 191 (251)
T ss_dssp TTTTTCTTCCEEECCSCCB
T ss_pred HHHhCCCCCCEEEeeCCce
Confidence 3333333333333333333
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=7.1e-23 Score=203.82 Aligned_cols=181 Identities=21% Similarity=0.244 Sum_probs=156.7
Q ss_pred CCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEc
Q 039322 73 GALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNV 152 (708)
Q Consensus 73 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 152 (708)
.+.++++++++.++ .+|..+. ++|++|+|++|.++++.+..|..+++|++|+|++|+++++.+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 35678888888888 5666555 68899999999999888888899999999999999998888888889999999999
Q ss_pred ccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCccccc
Q 039322 153 SMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNS 232 (708)
Q Consensus 153 ~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~ 232 (708)
++|+|+...+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999888888888999999999999999877677788899999999999999977777888999999999999999987
Q ss_pred CCCCCCccccceeecccCcccccC
Q 039322 233 VPENLGNLLKLHYLGLSNNQFVLE 256 (708)
Q Consensus 233 ~~~~~~~l~~L~~L~l~~n~l~~~ 256 (708)
.+..|..+++|+.|++++|++...
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCC
Confidence 777888999999999999999754
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=7.3e-26 Score=238.43 Aligned_cols=250 Identities=17% Similarity=0.162 Sum_probs=146.5
Q ss_pred cccCCCccCCCCccccCCCCccEEeccCCccccccC----ccCcCCC-CCcEEEccCCccccccccccCCC-----CCCC
Q 039322 55 GLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIP----KILRNCS-SLIRVRLNSNNLTGNISEALGIY-----PNLT 124 (708)
Q Consensus 55 ~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~----~~~~~l~-~L~~L~l~~n~i~~~~~~~~~~~-----~~L~ 124 (708)
.+++|.+++.+|..+...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|.|++..+..|..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 345555555555555555557777777777665554 5566666 67777777777766555555443 6677
Q ss_pred EEEcccCcceeeCCCCC----CCC-CCCCEEEcccCcccccCCcccc----C-CCCCCEEecccccccccCC----cccC
Q 039322 125 FIDLSRNDFYGEISSNW----GKC-PKLGTLNVSMNNITGGIPREIG----N-SSQLQALDLSLNHIVGEIP----KELG 190 (708)
Q Consensus 125 ~L~l~~n~l~~~~~~~~----~~l-~~L~~L~L~~N~i~~~~~~~~~----~-l~~L~~L~L~~n~l~~~~~----~~~~ 190 (708)
+|+|++|+++...+..+ ..+ ++|++|+|++|+|+...+..+. . .++|++|+|++|++++... ..+.
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~ 163 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILA 163 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHh
Confidence 77777777665444322 233 5677777777777655443332 2 2467777777777764332 2233
Q ss_pred CCC-CCCEEEccCccccccCCccc----CCC-CCCCeEeccCCcccccC----CCCCCc-cccceeecccCcccccCCCh
Q 039322 191 KLN-SLTELILRGNQFTGRLPPEI----GSL-VDLEYLDLSANRFNNSV----PENLGN-LLKLHYLGLSNNQFVLELPK 259 (708)
Q Consensus 191 ~l~-~L~~L~l~~n~l~~~~~~~~----~~~-~~L~~L~l~~N~i~~~~----~~~~~~-l~~L~~L~l~~n~l~~~~~~ 259 (708)
.++ +|++|+|++|++++..+..+ ..+ ++|++|+|++|+|++.. +..+.. .++|+.|+|++|++++..+.
T Consensus 164 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 243 (362)
T 3goz_A 164 AIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLE 243 (362)
T ss_dssp TSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHH
T ss_pred cCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHH
Confidence 444 67777777777765444332 333 46777777777776422 223333 24677777777777655443
Q ss_pred h----hhhhcccchhhcccccCCCCCc-------hhhcCcccCCceecccccccCC
Q 039322 260 E----LEKLVQLSELDASHNLFGGEIP-------FQICSLKSLEKLNLSHNNLSGS 304 (708)
Q Consensus 260 ~----~~~l~~L~~L~ls~N~i~~~~~-------~~~~~~~~L~~L~l~~N~l~~~ 304 (708)
. +..+++|+.|+|++|.+.+..+ ..+..+++|+.|++++|++...
T Consensus 244 ~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 244 NLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 2 3445677777777777443322 2345566777777777777644
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=3.1e-24 Score=220.93 Aligned_cols=224 Identities=20% Similarity=0.173 Sum_probs=174.1
Q ss_pred CcccccccCCCccCCCCc---cccCCCCccEEeccCCccccccCccC--cCCCCCcEEEccCCccccccc----cccCCC
Q 039322 50 MLTRPGLDFNHFTSYLPH---NVCRGGALQYFGVSENHFQGTIPKIL--RNCSSLIRVRLNSNNLTGNIS----EALGIY 120 (708)
Q Consensus 50 ~l~~l~l~~n~~~~~~~~---~~~~l~~L~~L~l~~n~i~~~~~~~~--~~l~~L~~L~l~~n~i~~~~~----~~~~~~ 120 (708)
.++.+.+..+.+....-. .+..+++|++|++++|.+++..|..+ .++++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 455666666555321101 11223669999999999998888887 889999999999999986433 445678
Q ss_pred CCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccc---cC-CccccCCCCCCEEecccccccccCCc----ccCCC
Q 039322 121 PNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITG---GI-PREIGNSSQLQALDLSLNHIVGEIPK----ELGKL 192 (708)
Q Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~---~~-~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~l 192 (708)
++|++|+|++|++.++.+..|..+++|++|+|++|++.+ .. +..+..+++|++|+|++|+++. .+. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 899999999999988888899999999999999998764 22 2334678899999999999973 222 24678
Q ss_pred CCCCEEEccCccccccCCcccCCC---CCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccch
Q 039322 193 NSLTELILRGNQFTGRLPPEIGSL---VDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSE 269 (708)
Q Consensus 193 ~~L~~L~l~~n~l~~~~~~~~~~~---~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 269 (708)
++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999997777777776 69999999999999 5566664 7999999999999864 33 677899999
Q ss_pred hhcccccCCC
Q 039322 270 LDASHNLFGG 279 (708)
Q Consensus 270 L~ls~N~i~~ 279 (708)
|+|++|++++
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999874
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.2e-23 Score=215.87 Aligned_cols=194 Identities=23% Similarity=0.305 Sum_probs=121.2
Q ss_pred cCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 039322 94 RNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQA 173 (708)
Q Consensus 94 ~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 173 (708)
.++++|++|++++|.++.+. .+..+++|++|++++|+++++.+ +..+++|++|+|++|.++.. ..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 34555666666666555432 35555666666666666654444 55666666666666666532 24666666666
Q ss_pred EecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCccc
Q 039322 174 LDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQF 253 (708)
Q Consensus 174 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l 253 (708)
|+|++|++++. + .+..+++|++|++++|.+++..+ +..+++|++|+|++|++++..+ +..+++|+.|++++|++
T Consensus 112 L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 66666666642 2 26666667777777766663322 6666777777777777764333 66677777777777777
Q ss_pred ccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccC
Q 039322 254 VLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSG 303 (708)
Q Consensus 254 ~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~ 303 (708)
++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 64332 6677777777777777775442 6677777777777777763
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=4.2e-24 Score=219.90 Aligned_cols=200 Identities=17% Similarity=0.172 Sum_probs=98.7
Q ss_pred CCCCEEEcccCcceeeCCCCC--CCCCCCCEEEcccCcccccCC----ccccCCCCCCEEecccccccccCCcccCCCCC
Q 039322 121 PNLTFIDLSRNDFYGEISSNW--GKCPKLGTLNVSMNNITGGIP----REIGNSSQLQALDLSLNHIVGEIPKELGKLNS 194 (708)
Q Consensus 121 ~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~L~~N~i~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 194 (708)
++|++|++++|++.+..+..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++.+..+..+..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 345555555555554444444 445555555555555543222 22234455555555555555444445555555
Q ss_pred CCEEEccCcccccc---C-CcccCCCCCCCeEeccCCcccccCCC----CCCccccceeecccCcccccCCChhhhhh--
Q 039322 195 LTELILRGNQFTGR---L-PPEIGSLVDLEYLDLSANRFNNSVPE----NLGNLLKLHYLGLSNNQFVLELPKELEKL-- 264 (708)
Q Consensus 195 L~~L~l~~n~l~~~---~-~~~~~~~~~L~~L~l~~N~i~~~~~~----~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-- 264 (708)
|++|+|++|++.+. . +..+..+++|++|+|++|+++. .+. .+..+++|+.|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 55555555554321 1 1122445555555555555542 111 12344555555555555554444444333
Q ss_pred -cccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCC
Q 039322 265 -VQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQ 326 (708)
Q Consensus 265 -~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 326 (708)
++|+.|+|++|+|+ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|++++|+++
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 45555555555555 3343332 5566666666666543 22 455566666666666655
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=6.3e-25 Score=229.14 Aligned_cols=157 Identities=22% Similarity=0.269 Sum_probs=70.0
Q ss_pred CCCCccEEeccCCccccc-cCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccC-cceee-CCCCCCCCCCC
Q 039322 71 RGGALQYFGVSENHFQGT-IPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRN-DFYGE-ISSNWGKCPKL 147 (708)
Q Consensus 71 ~l~~L~~L~l~~n~i~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n-~l~~~-~~~~~~~l~~L 147 (708)
.+++|++|++++|.+++. .+..+..+++|++|+|++|.+++..+..+..+++|++|++++| .+++. .+..+..+++|
T Consensus 91 ~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L 170 (336)
T 2ast_B 91 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 170 (336)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCC
Confidence 344555555555554433 3444445555555555555554444444444555555555555 33321 12223344455
Q ss_pred CEEEcccC-ccccc-CCccccCCC-CCCEEeccccc--cc-ccCCcccCCCCCCCEEEccCcc-ccccCCcccCCCCCCC
Q 039322 148 GTLNVSMN-NITGG-IPREIGNSS-QLQALDLSLNH--IV-GEIPKELGKLNSLTELILRGNQ-FTGRLPPEIGSLVDLE 220 (708)
Q Consensus 148 ~~L~L~~N-~i~~~-~~~~~~~l~-~L~~L~L~~n~--l~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~ 220 (708)
++|++++| .++.. .+..+..++ +|++|+|++|. ++ +.++..+..+++|++|++++|. +++..+..+..+++|+
T Consensus 171 ~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~ 250 (336)
T 2ast_B 171 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 250 (336)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred CEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCC
Confidence 55555555 44422 233344444 45555555542 22 1222333344444444444444 3333333444444444
Q ss_pred eEeccCC
Q 039322 221 YLDLSAN 227 (708)
Q Consensus 221 ~L~l~~N 227 (708)
+|+|++|
T Consensus 251 ~L~l~~~ 257 (336)
T 2ast_B 251 HLSLSRC 257 (336)
T ss_dssp EEECTTC
T ss_pred EeeCCCC
Confidence 4444444
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=5.5e-26 Score=241.86 Aligned_cols=190 Identities=18% Similarity=0.172 Sum_probs=89.5
Q ss_pred CCccccCCCCccEEeccCCccccccC----ccCcCCCCCcEEEccCCccc---cccccc-------cCCCCCCCEEEccc
Q 039322 65 LPHNVCRGGALQYFGVSENHFQGTIP----KILRNCSSLIRVRLNSNNLT---GNISEA-------LGIYPNLTFIDLSR 130 (708)
Q Consensus 65 ~~~~~~~l~~L~~L~l~~n~i~~~~~----~~~~~l~~L~~L~l~~n~i~---~~~~~~-------~~~~~~L~~L~l~~ 130 (708)
++..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+. +..+.. |..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 34445555666666666666664422 23555666666666664332 222222 24555566666666
Q ss_pred Cccee----eCCCCCCCCCCCCEEEcccCcccccCCccccC----C---------CCCCEEecccccccc-cCC---ccc
Q 039322 131 NDFYG----EISSNWGKCPKLGTLNVSMNNITGGIPREIGN----S---------SQLQALDLSLNHIVG-EIP---KEL 189 (708)
Q Consensus 131 n~l~~----~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~----l---------~~L~~L~L~~n~l~~-~~~---~~~ 189 (708)
|.++. ..+..+..+++|++|+|++|.|+...+..+.. + ++|++|+|++|+++. ..+ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 55543 12233445555555555555554332222222 2 455555555555541 111 233
Q ss_pred CCCCCCCEEEccCccccc-----cCCcccCCCCCCCeEeccCCccc----ccCCCCCCccccceeecccCcccc
Q 039322 190 GKLNSLTELILRGNQFTG-----RLPPEIGSLVDLEYLDLSANRFN----NSVPENLGNLLKLHYLGLSNNQFV 254 (708)
Q Consensus 190 ~~l~~L~~L~l~~n~l~~-----~~~~~~~~~~~L~~L~l~~N~i~----~~~~~~~~~l~~L~~L~l~~n~l~ 254 (708)
..+++|++|+|++|+++. ..+..+..+++|++|+|++|.|+ ...|..+..+++|+.|+|++|.++
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~ 257 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLS 257 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCc
Confidence 344455555555555441 12223444445555555555543 233333444444444444444444
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=7.5e-26 Score=240.78 Aligned_cols=255 Identities=19% Similarity=0.243 Sum_probs=202.9
Q ss_pred CccEEeccCCccccccCccCcCCCCCcEEEccCCccccccc----cccCCCCCCCEEEcccCcce---eeCCCC------
Q 039322 74 ALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNIS----EALGIYPNLTFIDLSRNDFY---GEISSN------ 140 (708)
Q Consensus 74 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~----~~~~~~~~L~~L~l~~n~l~---~~~~~~------ 140 (708)
.|+...++...+. .++..+..+++|++|+|++|.|+...+ ..|..+++|++|+|++|.+. +..+..
T Consensus 10 ~L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~ 88 (386)
T 2ca6_A 10 SLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQ 88 (386)
T ss_dssp CCEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHH
T ss_pred ccccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHH
Confidence 3444444555554 566778889999999999999996644 44778999999999997553 222323
Q ss_pred -CCCCCCCCEEEcccCcccc----cCCccccCCCCCCEEecccccccccCCcccC----CC---------CCCCEEEccC
Q 039322 141 -WGKCPKLGTLNVSMNNITG----GIPREIGNSSQLQALDLSLNHIVGEIPKELG----KL---------NSLTELILRG 202 (708)
Q Consensus 141 -~~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l---------~~L~~L~l~~ 202 (708)
+..+++|++|+|++|.++. ..+..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++
T Consensus 89 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~ 168 (386)
T 2ca6_A 89 ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGR 168 (386)
T ss_dssp HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCS
T ss_pred HHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCC
Confidence 3678999999999999986 4667888999999999999999754443333 33 8999999999
Q ss_pred cccc-ccCC---cccCCCCCCCeEeccCCcccc-----cCCCCCCccccceeecccCcccc----cCCChhhhhhcccch
Q 039322 203 NQFT-GRLP---PEIGSLVDLEYLDLSANRFNN-----SVPENLGNLLKLHYLGLSNNQFV----LELPKELEKLVQLSE 269 (708)
Q Consensus 203 n~l~-~~~~---~~~~~~~~L~~L~l~~N~i~~-----~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~ 269 (708)
|+++ ...+ ..+..+++|++|+|++|+|+. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|+.
T Consensus 169 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~ 248 (386)
T 2ca6_A 169 NRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRE 248 (386)
T ss_dssp SCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCE
T ss_pred CCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCE
Confidence 9997 3333 356788999999999999983 34557889999999999999996 457778899999999
Q ss_pred hhcccccCCCC----Cchhhc--CcccCCceecccccccC----CCCCcc-cccccccEEecCCCcCCCCC
Q 039322 270 LDASHNLFGGE----IPFQIC--SLKSLEKLNLSHNNLSG----SIPNCF-EGIRGISVIDISDNQLQGPV 329 (708)
Q Consensus 270 L~ls~N~i~~~----~~~~~~--~~~~L~~L~l~~N~l~~----~~~~~~-~~l~~L~~l~l~~N~l~~~~ 329 (708)
|+|++|.|++. ++..+. .+++|+.|+|++|+++. .+|..+ ..+++|+.|++++|++++..
T Consensus 249 L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 249 LGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp EECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred EECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 99999999865 345553 38999999999999996 366666 56899999999999998764
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=2.9e-23 Score=213.04 Aligned_cols=191 Identities=23% Similarity=0.254 Sum_probs=105.2
Q ss_pred CCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEE
Q 039322 72 GGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLN 151 (708)
Q Consensus 72 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (708)
+++|++|++++|.++. ++ .+..+++|++|+|++|.++++.+ +..+++|++|++++|+++++. .+..+++|+.|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVS--AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCG--GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCch--hhcCCCCCCEEE
Confidence 4455555555555543 22 35555555555555555554433 555555555555555555432 355555556666
Q ss_pred cccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccc
Q 039322 152 VSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNN 231 (708)
Q Consensus 152 L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~ 231 (708)
+++|+++... .+..+++|++|+|++|++++..+ +..+++|++|++++|++++. +. +..+++|+.|++++|++++
T Consensus 114 l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCc
Confidence 6665555321 25555666666666665553322 55556666666666666532 22 5556666666666666654
Q ss_pred cCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCC
Q 039322 232 SVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFG 278 (708)
Q Consensus 232 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~ 278 (708)
..+ +..+++|+.|++++|++++.. .+..+++|+.|++++|+++
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred Chh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 332 555666666666666666433 2566666666666666665
No 343
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.89 E-value=2.7e-26 Score=258.90 Aligned_cols=342 Identities=14% Similarity=0.073 Sum_probs=170.1
Q ss_pred CCcEEECCCCc-cccc-CCccccCCCCCCEEEeeCceeeeeCCC----CC-CCCCcccccccCCCccC----CCCccccC
Q 039322 3 SLSILDLNQNQ-FKGV-LPPSVSNLTNLKELVLLYNNLSGFIPP----SL-ENPMLTRPGLDFNHFTS----YLPHNVCR 71 (708)
Q Consensus 3 ~L~~L~l~~n~-i~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~----~~-~~~~l~~l~l~~n~~~~----~~~~~~~~ 71 (708)
+|++|+|++|. ++.. .+....++++|++|+|++|.+.+.... .. ..++|+.|++++|.++. .++..+..
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 37888888876 3211 122234678888888888877543211 11 12678888888887763 23344456
Q ss_pred CCCccEEeccCCccccccCccCcCCCCCcEEEccCCccc---cccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCC
Q 039322 72 GGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLT---GNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLG 148 (708)
Q Consensus 72 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~---~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 148 (708)
+++|++|++++|.+.+ ++..+.++++|++|+++.+... ......+..+++|+.|+++++... ..+..+..+++|+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIR 296 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCc
Confidence 6788888888887774 4566777777777777643222 122234455556666666554322 2233344555666
Q ss_pred EEEcccCcccccCC-ccccCCCCCCEEecccccccc-cCCcccCCCCCCCEEEcc-----------CccccccCC-cccC
Q 039322 149 TLNVSMNNITGGIP-REIGNSSQLQALDLSLNHIVG-EIPKELGKLNSLTELILR-----------GNQFTGRLP-PEIG 214 (708)
Q Consensus 149 ~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~-----------~n~l~~~~~-~~~~ 214 (708)
+|+|++|.++.... ..+..+++|++|+++ +.+.. ..+..+..+++|++|+++ .|.+++... ..+.
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~ 375 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQ 375 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHh
Confidence 66666665543222 224455566666665 32321 112222345555666555 233332111 1122
Q ss_pred CCCCCCeEeccCCcccccCCCCCCc-cccceeeccc----CcccccC-----CChhhhhhcccchhhcccc--cCCCCCc
Q 039322 215 SLVDLEYLDLSANRFNNSVPENLGN-LLKLHYLGLS----NNQFVLE-----LPKELEKLVQLSELDASHN--LFGGEIP 282 (708)
Q Consensus 215 ~~~~L~~L~l~~N~i~~~~~~~~~~-l~~L~~L~l~----~n~l~~~-----~~~~~~~l~~L~~L~ls~N--~i~~~~~ 282 (708)
.+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++. .+..+.++++|+.|++++| .+++...
T Consensus 376 ~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~ 455 (592)
T 3ogk_B 376 GCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGL 455 (592)
T ss_dssp HCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHH
T ss_pred hCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHH
Confidence 3455555555555555443333333 4555555553 4444432 1122444555555555432 2333222
Q ss_pred hhhc-CcccCCceecccccccCC-CCCcccccccccEEecCCCcCCCC-CCC-ccccccCccccccccc
Q 039322 283 FQIC-SLKSLEKLNLSHNNLSGS-IPNCFEGIRGISVIDISDNQLQGP-VPN-STAFRNAPVEALKGNK 347 (708)
Q Consensus 283 ~~~~-~~~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~-~~~-~~~~~~~~~~~~~~n~ 347 (708)
..+. .+++|+.|++++|++++. .+..+.++++|+.|++++|+++.. ++. ...++.++.+.+++|+
T Consensus 456 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 456 SYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 2222 245555555555555431 222234445555555555554321 111 1233445555555554
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1e-24 Score=227.62 Aligned_cols=249 Identities=17% Similarity=0.195 Sum_probs=129.8
Q ss_pred ccEEeccCCccccccCccCcCC--CCCcEEEccCCccccccccccCCCCCCCEEEcccCcceee-CCCCCCCCCCCCEEE
Q 039322 75 LQYFGVSENHFQGTIPKILRNC--SSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGE-ISSNWGKCPKLGTLN 151 (708)
Q Consensus 75 L~~L~l~~n~i~~~~~~~~~~l--~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~ 151 (708)
++.+++++|.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|++++|.++.. .+..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 445555555544 2333444 5555555555555544333 33455555555555555432 333444555555555
Q ss_pred cccCcccccCCccccCCCCCCEEecccc-ccccc-CCcccCCCCCCCEEEccCc-ccccc-CCcccCCCC-CCCeEeccC
Q 039322 152 VSMNNITGGIPREIGNSSQLQALDLSLN-HIVGE-IPKELGKLNSLTELILRGN-QFTGR-LPPEIGSLV-DLEYLDLSA 226 (708)
Q Consensus 152 L~~N~i~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~l~~n-~l~~~-~~~~~~~~~-~L~~L~l~~ 226 (708)
|++|.++...+..++.+++|++|+|++| .+++. .+..+..+++|++|++++| .+++. .+..+..++ +|++|+|++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 5555555444555555555555555555 34431 3333445555666666655 55532 334445555 666666666
Q ss_pred Cc--cc-ccCCCCCCccccceeecccCcc-cccCCChhhhhhcccchhhccccc-CCCCCchhhcCcccCCceecccccc
Q 039322 227 NR--FN-NSVPENLGNLLKLHYLGLSNNQ-FVLELPKELEKLVQLSELDASHNL-FGGEIPFQICSLKSLEKLNLSHNNL 301 (708)
Q Consensus 227 N~--i~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~ls~N~-i~~~~~~~~~~~~~L~~L~l~~N~l 301 (708)
|. ++ +..+..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++| +
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i 283 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-V 283 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-S
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-c
Confidence 62 33 2233344555666666666666 444455556666666666666663 22222224556666777777766 2
Q ss_pred cCCCCCccccc-ccccEEecCCCcCCCCCCC
Q 039322 302 SGSIPNCFEGI-RGISVIDISDNQLQGPVPN 331 (708)
Q Consensus 302 ~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~~ 331 (708)
+ ...+..+ ..++.|++++|.+++..|.
T Consensus 284 ~---~~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 284 P---DGTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp C---TTCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred C---HHHHHHHHhhCcceEEecccCccccCC
Confidence 2 2233333 2366666777777766554
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=1.1e-22 Score=213.02 Aligned_cols=222 Identities=15% Similarity=0.076 Sum_probs=118.7
Q ss_pred CCccEEeccCCccccccCccCcCCCCCcEEEccCCcccc-ccccccCCCCCCCE-EEcccCcceeeCCCCCCCCCCCCEE
Q 039322 73 GALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTG-NISEALGIYPNLTF-IDLSRNDFYGEISSNWGKCPKLGTL 150 (708)
Q Consensus 73 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~~~~~~~~~L~~-L~l~~n~l~~~~~~~~~~l~~L~~L 150 (708)
+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+ +...+|.+++++++ +.+..|+++.+.+..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 345566666666654444455666666666666665532 34445555555543 4444456665656666666666666
Q ss_pred EcccCcccccCCccccCCCCCCEEeccc-ccccccCCcccCCCC-CCCEEEccCccccccCCcccCCCCCCCeEeccC-C
Q 039322 151 NVSMNNITGGIPREIGNSSQLQALDLSL-NHIVGEIPKELGKLN-SLTELILRGNQFTGRLPPEIGSLVDLEYLDLSA-N 227 (708)
Q Consensus 151 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~-N 227 (708)
++++|+|+...+..+....++..|++.+ |++....+..|..++ .++.|+|++|+|+.+.+..| ...+|++|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCC
Confidence 6666666555444454555555555543 445544444454443 45566666666663333333 344566666653 4
Q ss_pred cccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccc
Q 039322 228 RFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHN 299 (708)
Q Consensus 228 ~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N 299 (708)
.++...++.|..+++|+.|+|++|+|+...+..|.++.+|+.+++ +.++ ..| .+..+++|+.++++++
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 555444445566666666666666666444445555555554443 2233 333 2455666666666543
No 346
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.88 E-value=6.4e-26 Score=255.90 Aligned_cols=323 Identities=14% Similarity=0.053 Sum_probs=161.8
Q ss_pred CCCCCCEEEeeCceeeeeCCCCCCC--CC-cccccccCCCc-cC-CCCccccCCCCccEEeccCCcccccc----CccCc
Q 039322 24 NLTNLKELVLLYNNLSGFIPPSLEN--PM-LTRPGLDFNHF-TS-YLPHNVCRGGALQYFGVSENHFQGTI----PKILR 94 (708)
Q Consensus 24 ~l~~L~~L~L~~n~i~~~~~~~~~~--~~-l~~l~l~~n~~-~~-~~~~~~~~l~~L~~L~l~~n~i~~~~----~~~~~ 94 (708)
.+++|++|+|++|.+++..+..+.. ++ |+.|++++|.. .. .++.....+++|++|+|++|.+++.. +..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 4555666666665554333222221 22 55555555541 10 01111224455555555555554331 12233
Q ss_pred CCCCCcEEEccCCccccc----cccccCCCCCCCEEEcccCcceeeC--------------------------CCCCCCC
Q 039322 95 NCSSLIRVRLNSNNLTGN----ISEALGIYPNLTFIDLSRNDFYGEI--------------------------SSNWGKC 144 (708)
Q Consensus 95 ~l~~L~~L~l~~n~i~~~----~~~~~~~~~~L~~L~l~~n~l~~~~--------------------------~~~~~~l 144 (708)
++++|++|+|++|.++++ .+..+..+++|++|++++|.+.++. ...+..+
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~ 269 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFP 269 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhcc
Confidence 445555555555555421 2222344555555555555544321 1233444
Q ss_pred CCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCC-cccCCCCCCCEEEccCccccccCCcccCCCCCCCeEe
Q 039322 145 PKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIP-KELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLD 223 (708)
Q Consensus 145 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 223 (708)
++|+.|+++++... ..+..+..+++|++|+|++|.+++... ..+..+++|++|+++++...+.++..+..+++|++|+
T Consensus 270 ~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 270 RKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp TTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEE
T ss_pred ccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEE
Confidence 55555555554322 344555566667777777766553222 2345667777777763322222222334566677777
Q ss_pred cc-----------CCcccccCCCC-CCccccceeecccCcccccCCChhhhh-hcccchhhcc----cccCCCC-----C
Q 039322 224 LS-----------ANRFNNSVPEN-LGNLLKLHYLGLSNNQFVLELPKELEK-LVQLSELDAS----HNLFGGE-----I 281 (708)
Q Consensus 224 l~-----------~N~i~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~ls----~N~i~~~-----~ 281 (708)
|+ .|.+++..... +..+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++. .
T Consensus 349 L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~ 428 (592)
T 3ogk_B 349 IERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGV 428 (592)
T ss_dssp EECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHH
T ss_pred eecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHH
Confidence 77 34554322211 234667777777777776555555544 6677777775 5566643 2
Q ss_pred chhhcCcccCCceeccccc--ccCCCCCccc-ccccccEEecCCCcCCCC-CCC-ccccccCccccccccc
Q 039322 282 PFQICSLKSLEKLNLSHNN--LSGSIPNCFE-GIRGISVIDISDNQLQGP-VPN-STAFRNAPVEALKGNK 347 (708)
Q Consensus 282 ~~~~~~~~~L~~L~l~~N~--l~~~~~~~~~-~l~~L~~l~l~~N~l~~~-~~~-~~~~~~~~~~~~~~n~ 347 (708)
+..+..+++|+.|+++.|. +++.....+. .+++|+.|++++|.+++. ++. ....++++.+.+.+|+
T Consensus 429 ~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 429 RSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCC 499 (592)
T ss_dssp HHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCC
T ss_pred HHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCC
Confidence 2334556777777776432 4433232222 356677777777776542 111 1234556666666664
No 347
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.3e-22 Score=204.79 Aligned_cols=155 Identities=16% Similarity=0.138 Sum_probs=120.8
Q ss_pred HHHHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcch-----h---------HhHHHHHHHHHHHHhccC
Q 039322 430 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQ-----I---------ADQKEFLIEVKALTEIRH 495 (708)
Q Consensus 430 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~-----~---------~~~~~~~~e~~~l~~l~h 495 (708)
........|.+.+.||+|+||.||+|...+|+.||+|+++....... . .....+.+|++++++++|
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 33444556777899999999999999887799999999975321100 0 235678999999999984
Q ss_pred CceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee
Q 039322 496 RNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLL 575 (708)
Q Consensus 496 ~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill 575 (708)
+++.+++.. +..++||||++||+|.+ +.. .....++.|++.||+|||++ ||+||||||+||++
T Consensus 164 ---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 164 ---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp ---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred ---CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 555555433 55699999999999998 522 22447999999999999999 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCccccccccccccCccccc
Q 039322 576 DLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAY 615 (708)
Q Consensus 576 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~ 615 (708)
+ ++.+||+|||+|+.. ..+.|||++.
T Consensus 227 ~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~ 252 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVEV-------------GEEGWREILE 252 (282)
T ss_dssp E-TTEEEECCCTTCEET-------------TSTTHHHHHH
T ss_pred E-CCcEEEEECCCCeEC-------------CCCCHHHHHH
Confidence 9 999999999999732 3467888764
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=2.2e-21 Score=187.21 Aligned_cols=152 Identities=20% Similarity=0.206 Sum_probs=79.5
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccC
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMN 155 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 155 (708)
+.++++++.++ .+|..+ .++|++|++++|+++++.+..|..+++|++|++++|+++.+.+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 34555555555 233322 245566666666665555555555555666666555555555555555555555555555
Q ss_pred cccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCccc
Q 039322 156 NITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 156 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~ 230 (708)
+|+...+..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 555444444555555555555555555444444445555555555555555433333444455555555555443
No 349
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.86 E-value=5.4e-25 Score=248.45 Aligned_cols=202 Identities=17% Similarity=0.132 Sum_probs=103.5
Q ss_pred CCCCCEEEcccCcccccCC-ccccCCCCCCEEecccccccccCCc-ccCCCCCCCEEEccC---------ccccccCCcc
Q 039322 144 CPKLGTLNVSMNNITGGIP-REIGNSSQLQALDLSLNHIVGEIPK-ELGKLNSLTELILRG---------NQFTGRLPPE 212 (708)
Q Consensus 144 l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~l~~---------n~l~~~~~~~ 212 (708)
+++|++|+|++|.++.... ..+..+++|++|++++| +...... ....+++|++|++.+ +.+++.....
T Consensus 288 ~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~ 366 (594)
T 2p1m_B 288 CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVS 366 (594)
T ss_dssp HTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHH
T ss_pred hCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHH
Confidence 4556666666665543221 12345566666666655 3311111 122355666666522 3333211111
Q ss_pred cC-CCCCCCeEeccCCcccccCCCCCC-ccccceeeccc--C----cccccCCC-----hhhhhhcccchhhcccccCCC
Q 039322 213 IG-SLVDLEYLDLSANRFNNSVPENLG-NLLKLHYLGLS--N----NQFVLELP-----KELEKLVQLSELDASHNLFGG 279 (708)
Q Consensus 213 ~~-~~~~L~~L~l~~N~i~~~~~~~~~-~l~~L~~L~l~--~----n~l~~~~~-----~~~~~l~~L~~L~ls~N~i~~ 279 (708)
+. .+++|++|.++.|.+++.....+. .+++|+.|+++ + |.++.... ..+..+++|+.|++++ .+++
T Consensus 367 l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 367 VSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 21 256666666666666544333333 35677777776 3 44542211 1245566777777765 5554
Q ss_pred CCchhhcC-cccCCceecccccccCCCCCcc-cccccccEEecCCCcCCCCCC--CccccccCccccccccc
Q 039322 280 EIPFQICS-LKSLEKLNLSHNNLSGSIPNCF-EGIRGISVIDISDNQLQGPVP--NSTAFRNAPVEALKGNK 347 (708)
Q Consensus 280 ~~~~~~~~-~~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~l~l~~N~l~~~~~--~~~~~~~~~~~~~~~n~ 347 (708)
..+..+.. +++|+.|++++|.+++.....+ .++++|+.|++++|++++... ....+++++.+.+.+|+
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 44444443 6777777777777654433333 456777777777777743211 12234556666666653
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=5.6e-21 Score=184.27 Aligned_cols=181 Identities=20% Similarity=0.183 Sum_probs=136.5
Q ss_pred cEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccc
Q 039322 100 IRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLN 179 (708)
Q Consensus 100 ~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n 179 (708)
+.++.+++.++.++... .++|++|++++|+++++.+..|..+++|++|+|++|+++...+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCCCCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 56778888877665432 357888888888888777777888888888888888888776667788888888888888
Q ss_pred cccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCCh
Q 039322 180 HIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPK 259 (708)
Q Consensus 180 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 259 (708)
++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 88866666677888888888888888866666677788888888888888866666677778888888888876532
Q ss_pred hhhhhcccchhhcccccCCCCCchhhcCccc
Q 039322 260 ELEKLVQLSELDASHNLFGGEIPFQICSLKS 290 (708)
Q Consensus 260 ~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~ 290 (708)
+++|+.|+++.|.+++.+|..++.++.
T Consensus 164 ----~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 ----CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCHHHHHHHHHhCCceeeccCccccC
Confidence 346777777777777777766665543
No 351
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.85 E-value=3.2e-24 Score=242.10 Aligned_cols=324 Identities=14% Similarity=0.088 Sum_probs=215.0
Q ss_pred CCCCcEEECCCCcccccCCcccc-CCCCCCEEEeeCc-eeeee-CCCCC-CCCCcccccccCCCccCCCCcccc----CC
Q 039322 1 MRSLSILDLNQNQFKGVLPPSVS-NLTNLKELVLLYN-NLSGF-IPPSL-ENPMLTRPGLDFNHFTSYLPHNVC----RG 72 (708)
Q Consensus 1 l~~L~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~n-~i~~~-~~~~~-~~~~l~~l~l~~n~~~~~~~~~~~----~l 72 (708)
+++|++|+|++|.++...+..+. .+++|++|+|++| .++.. ++..+ ..++|++|++++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 35778888888877766655554 5778888888877 44432 11222 236777888887776654433332 45
Q ss_pred CCccEEeccCCc--cccc-cCccCcCCCCCcEEEccCC-cc---------------------------------------
Q 039322 73 GALQYFGVSENH--FQGT-IPKILRNCSSLIRVRLNSN-NL--------------------------------------- 109 (708)
Q Consensus 73 ~~L~~L~l~~n~--i~~~-~~~~~~~l~~L~~L~l~~n-~i--------------------------------------- 109 (708)
++|++|++++|. ++.. .+..+.++++|++|+|++| .+
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 577777777775 2211 1111234566777777665 11
Q ss_pred ----------ccc----cccccCCCCCCCEEEcccCcceeeCC-CCCCCCCCCCEEEcccCcccccC-CccccCCCCCCE
Q 039322 110 ----------TGN----ISEALGIYPNLTFIDLSRNDFYGEIS-SNWGKCPKLGTLNVSMNNITGGI-PREIGNSSQLQA 173 (708)
Q Consensus 110 ----------~~~----~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~-~~~~~~l~~L~~ 173 (708)
... .+..+..+++|++|+|++|.++.... ..+..+++|++|++++| ++... +.....+++|++
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 111 11112256889999999998754322 22457899999999998 54322 223345899999
Q ss_pred Eecc---------cccccccCCcccC-CCCCCCEEEccCccccccCCcccC-CCCCCCeEecc--C----CcccccC---
Q 039322 174 LDLS---------LNHIVGEIPKELG-KLNSLTELILRGNQFTGRLPPEIG-SLVDLEYLDLS--A----NRFNNSV--- 233 (708)
Q Consensus 174 L~L~---------~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~-~~~~L~~L~l~--~----N~i~~~~--- 233 (708)
|+++ .+.+++.....+. ++++|++|.++.|.+++.....+. .+++|+.|+|+ + |.++...
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 9994 3555533333333 479999999999998865555554 58899999999 4 5666221
Q ss_pred --CCCCCccccceeecccCcccccCCChhhhh-hcccchhhcccccCCCCCchhh-cCcccCCceecccccccCCCCC-c
Q 039322 234 --PENLGNLLKLHYLGLSNNQFVLELPKELEK-LVQLSELDASHNLFGGEIPFQI-CSLKSLEKLNLSHNNLSGSIPN-C 308 (708)
Q Consensus 234 --~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~ls~N~i~~~~~~~~-~~~~~L~~L~l~~N~l~~~~~~-~ 308 (708)
+..+..+++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++.... .
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~ 501 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLAN 501 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHT
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHH
Confidence 11256778999999987 666555555555 7899999999999976555555 6689999999999999644333 3
Q ss_pred ccccccccEEecCCCcCC
Q 039322 309 FEGIRGISVIDISDNQLQ 326 (708)
Q Consensus 309 ~~~l~~L~~l~l~~N~l~ 326 (708)
...+++|+.|++++|+++
T Consensus 502 ~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 502 ASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp GGGGGGSSEEEEESSCCB
T ss_pred HHhCCCCCEEeeeCCCCC
Confidence 456899999999999884
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.8e-20 Score=206.18 Aligned_cols=189 Identities=20% Similarity=0.292 Sum_probs=149.3
Q ss_pred CccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcc
Q 039322 74 ALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVS 153 (708)
Q Consensus 74 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 153 (708)
+|+.|+|++|++++ +|..+. ++|++|+|++|+|+.++ ..+++|++|+|++|+|+++.. +.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls~N~l~~ip~--l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALISLP----ELPASLEYLDACDNRLSTLPE--LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSCCCC--CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcccc----cccCCCCEEEccCCCCCCcch--hhc--CCCEEECC
Confidence 78899999999886 565553 78999999999988655 456889999999999887544 544 89999999
Q ss_pred cCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccC
Q 039322 154 MNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSV 233 (708)
Q Consensus 154 ~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~ 233 (708)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999986 444 57889999999999985 454 56889999999999985 555 65 88999999999998 55
Q ss_pred CCCCCccccc-------eeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCccc
Q 039322 234 PENLGNLLKL-------HYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKS 290 (708)
Q Consensus 234 ~~~~~~l~~L-------~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~ 290 (708)
|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++..|..+..++.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 55 554 67 99999999998 56777777999999999999998888877776543
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=2.2e-20 Score=205.47 Aligned_cols=189 Identities=24% Similarity=0.305 Sum_probs=151.4
Q ss_pred CCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecc
Q 039322 98 SLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLS 177 (708)
Q Consensus 98 ~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 177 (708)
+|+.|+|++|+|++++... +++|++|+|++|+|+.+. ..+++|+.|+|++|+|++ +|. |.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l---~~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNL---PPQITVLEITQNALISLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSCCCSCC---CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCccCHhH---cCCCCEEECcCCCCcccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 8999999999999865543 378999999999998554 456899999999999986 555 554 89999999
Q ss_pred cccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCC
Q 039322 178 LNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLEL 257 (708)
Q Consensus 178 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 257 (708)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999986 554 67899999999999985 554 56889999999999986 555 65 88999999999998 45
Q ss_pred Chhhhhhccc-------chhhcccccCCCCCchhhcCcccCCceecccccccCCCCCccccccc
Q 039322 258 PKELEKLVQL-------SELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRG 314 (708)
Q Consensus 258 ~~~~~~l~~L-------~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~ 314 (708)
|. |.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|++++..|..+..+..
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 55 554 67 99999999998 56777777999999999999999888887776544
No 354
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=6.1e-21 Score=185.38 Aligned_cols=152 Identities=19% Similarity=0.238 Sum_probs=86.9
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCC
Q 039322 148 GTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSAN 227 (708)
Q Consensus 148 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N 227 (708)
+.+++++|.++. +|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 456666666663 333332 45666666666666555555666666666666666666555666666666666666666
Q ss_pred cccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceeccccccc
Q 039322 228 RFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLS 302 (708)
Q Consensus 228 ~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 302 (708)
+|+...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.|++..+..+..+++|+.|++++|++.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666444444555666666666666665555555555555555555555555444444445555555555555554
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=3.5e-21 Score=195.70 Aligned_cols=171 Identities=23% Similarity=0.275 Sum_probs=92.3
Q ss_pred CCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEE
Q 039322 71 RGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTL 150 (708)
Q Consensus 71 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 150 (708)
.+++|++|++++|.+++. + .+..+++|++|+|++|+++++.+ +..+++|++|++++|+++++. .+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLS--SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGG--GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCCh--hhccCCCCCEE
Confidence 344555555555555432 2 24555555555555555554433 555555555555555554432 25555555555
Q ss_pred EcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCccc
Q 039322 151 NVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 151 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~ 230 (708)
+|++|+++.. ..+..+++|+.|+|++|++++. ..+..+++|++|++++|++++..+ +..+++|++|+|++|.|+
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 5555555532 3455555666666666655533 345555666666666666653332 555666666666666665
Q ss_pred ccCCCCCCccccceeecccCccccc
Q 039322 231 NSVPENLGNLLKLHYLGLSNNQFVL 255 (708)
Q Consensus 231 ~~~~~~~~~l~~L~~L~l~~n~l~~ 255 (708)
+. + .+..+++|+.|++++|+++.
T Consensus 192 ~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 192 DL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp BC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CC-h-hhccCCCCCEEECcCCcccC
Confidence 32 2 25556666666666666653
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=6.9e-21 Score=193.53 Aligned_cols=191 Identities=22% Similarity=0.236 Sum_probs=150.1
Q ss_pred ccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEccc
Q 039322 75 LQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSM 154 (708)
Q Consensus 75 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 154 (708)
+..+.+..+.+++..+ +..+++|++|++++|.++.+. .+..+++|++|++++|+++++.+ +..+++|+.|++++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3444556666654332 456788899999998888663 47788899999999998887665 88888999999999
Q ss_pred CcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCC
Q 039322 155 NNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVP 234 (708)
Q Consensus 155 N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~ 234 (708)
|.++.. ..+..+++|++|+|++|++++. ..+..+++|+.|++++|++++. ..+..+++|++|++++|++++..+
T Consensus 100 n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 988853 3488888899999999988853 4677888899999999988854 578888889999999998886555
Q ss_pred CCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCC
Q 039322 235 ENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEI 281 (708)
Q Consensus 235 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~ 281 (708)
+..+++|+.|++++|.+++. + .+..+++|+.|++++|++....
T Consensus 174 --l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECCC
T ss_pred --hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCCc
Confidence 88888899999999988853 3 4888888999999999887543
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.8e-20 Score=196.91 Aligned_cols=152 Identities=26% Similarity=0.238 Sum_probs=93.4
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccC-CCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEccc
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALG-IYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSM 154 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~-~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 154 (708)
+.++++++.++ .+|..+. +.++.|+|++|+|+++.+..|. .+++|++|+|++|+|+.+.+..|..+++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46777777776 3454443 3466777777777766666666 667777777777777666666666666777777777
Q ss_pred CcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCccc---CCCCCCCeEeccCCccc
Q 039322 155 NNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEI---GSLVDLEYLDLSANRFN 230 (708)
Q Consensus 155 N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~~~~L~~L~l~~N~i~ 230 (708)
|+|+...+..|..+++|++|+|++|+|+...+..|.++++|++|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 76666655566666666666666666665555556666666666666666663333333 23444444444444444
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=7.1e-20 Score=177.81 Aligned_cols=151 Identities=23% Similarity=0.218 Sum_probs=80.7
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccC
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMN 155 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 155 (708)
+.++++++.++ .+|..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+++.+.+..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666666 3444333 45666666666666555555555566666666666655555555555555555555555
Q ss_pred cccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcc
Q 039322 156 NITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRF 229 (708)
Q Consensus 156 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i 229 (708)
+|+.+.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 55544444455555555555555555544444444455555555555554444333444444444444444444
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=6.9e-21 Score=184.98 Aligned_cols=136 Identities=19% Similarity=0.197 Sum_probs=75.7
Q ss_pred CCEEEccCccccccCC-cccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcc
Q 039322 195 LTELILRGNQFTGRLP-PEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDAS 273 (708)
Q Consensus 195 L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls 273 (708)
+++|+|++|++++..+ ..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|.++++|+.|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3444455554443322 234455555555555555554444455555555555555555555555555555555555555
Q ss_pred cccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCC
Q 039322 274 HNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVP 330 (708)
Q Consensus 274 ~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 330 (708)
+|.|++..+..+..+++|+.|+|++|++++..|..|..+++|+.|++++|++.|.++
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 555555555555556666666666666665556666666666666666666666544
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=6.8e-21 Score=212.03 Aligned_cols=170 Identities=21% Similarity=0.232 Sum_probs=104.0
Q ss_pred CCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEc
Q 039322 49 PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDL 128 (708)
Q Consensus 49 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l 128 (708)
++|+.|++++|.+.+. + .+..+++|+.|+|++|.+++..+ +.++++|+.|+|++|.|+++. .+..+++|++|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~--~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLS--SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCT--TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCCh--hhccCCCCCEEEe
Confidence 3444444444444442 2 35566667777777776665443 666667777777777666532 4666666666666
Q ss_pred ccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCcccccc
Q 039322 129 SRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGR 208 (708)
Q Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 208 (708)
++|++..+ ..+..+++|+.|+|++|.|+.. ..+..+++|+.|+|++|+|++..+ +..+++|+.|+|++|+|++.
T Consensus 117 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 117 EHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp TTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 66666643 2356666666666666666643 456666666666666666664433 66666666666666666643
Q ss_pred CCcccCCCCCCCeEeccCCccccc
Q 039322 209 LPPEIGSLVDLEYLDLSANRFNNS 232 (708)
Q Consensus 209 ~~~~~~~~~~L~~L~l~~N~i~~~ 232 (708)
..+..+++|+.|+|++|++.+.
T Consensus 191 --~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 191 --RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GGGTTCTTCSEEECCSEEEECC
T ss_pred --hHHccCCCCCEEEccCCcCcCC
Confidence 3466666666666666666643
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=3.6e-20 Score=194.60 Aligned_cols=176 Identities=22% Similarity=0.160 Sum_probs=145.5
Q ss_pred cEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCC-CCCCCCEEEcccCcccccCCccccCCCCCCEEeccc
Q 039322 100 IRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWG-KCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSL 178 (708)
Q Consensus 100 ~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 178 (708)
+.+++++|+++.++... .+.+++|+|++|+|+++.+..|. .+++|+.|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSL---PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSSCCSSC---CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCccCccC---CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 68899999998765432 24689999999999988888887 899999999999999988888899999999999999
Q ss_pred ccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCC---CccccceeecccCccccc
Q 039322 179 NHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENL---GNLLKLHYLGLSNNQFVL 255 (708)
Q Consensus 179 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~---~~l~~L~~L~l~~n~l~~ 255 (708)
|+|+...+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..| ..+++|+.|+|++|+|+.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99987777788889999999999999998888888889999999999999986555545 568888888888888886
Q ss_pred CCChhhhhhcc--cchhhcccccCC
Q 039322 256 ELPKELEKLVQ--LSELDASHNLFG 278 (708)
Q Consensus 256 ~~~~~~~~l~~--L~~L~ls~N~i~ 278 (708)
..+..|..++. ++.|+|++|++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 66677777776 377888888776
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1e-19 Score=176.77 Aligned_cols=152 Identities=23% Similarity=0.244 Sum_probs=74.1
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccc-cccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEccc
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNIS-EALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSM 154 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 154 (708)
+.+++++|.++ .+|..+. +.+++|+|++|+|+++.+ ..|..+++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35666666665 3344332 234555555555555432 3345555555555555555555555555555555555555
Q ss_pred CcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCccc
Q 039322 155 NNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 155 N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~ 230 (708)
|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 5555444444444455555555555444444444444444444444444444333444444444444444444433
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=1.8e-20 Score=208.54 Aligned_cols=203 Identities=22% Similarity=0.235 Sum_probs=154.8
Q ss_pred CcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcc
Q 039322 50 MLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLS 129 (708)
Q Consensus 50 ~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~ 129 (708)
.+..+.++.+.+....+ +..+.+|+.|++++|.+... + .+..+++|+.|+|++|.|+++.+ +..+++|++|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34555666666555433 45678889999999998853 3 58888999999999999887665 8888899999999
Q ss_pred cCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccC
Q 039322 130 RNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRL 209 (708)
Q Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 209 (708)
+|.+..+. .+..+++|+.|+|++|+|+.. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++..
T Consensus 96 ~N~l~~l~--~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 96 ENKIKDLS--SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SSCCCCCT--TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCCCCCh--hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 99887643 678888899999999988853 4688888888888888888854 56788888888888888888654
Q ss_pred CcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccc
Q 039322 210 PPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLS 268 (708)
Q Consensus 210 ~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 268 (708)
| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.......+..+..+.
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~ 224 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPN 224 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEEEC
T ss_pred h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccEEecc
Confidence 4 78888888888888888854 3577888888888888888755444444433333
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=4.6e-19 Score=173.34 Aligned_cols=151 Identities=19% Similarity=0.204 Sum_probs=76.2
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccC
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMN 155 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 155 (708)
+.++++++.++ .+|..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+++.+.+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 45666666665 3444333 55555555555555555555555555555555555555554455555555555555555
Q ss_pred cccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCccc
Q 039322 156 NITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 156 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~ 230 (708)
+|+...+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 555444444455555555555555554 33444444444444444444444333333444444444444444433
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=1.1e-19 Score=181.52 Aligned_cols=168 Identities=18% Similarity=0.225 Sum_probs=107.5
Q ss_pred CcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcc
Q 039322 50 MLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLS 129 (708)
Q Consensus 50 ~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~ 129 (708)
+++.++++.|.+++.. .+..+++|++|++++|.++. ++ .+..+++|++|+|++|+|+++.+ +..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 3455555555555432 45566777777777777763 33 56677777777777777776554 6777777777777
Q ss_pred cCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccC
Q 039322 130 RNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRL 209 (708)
Q Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 209 (708)
+|+++++... .. ++|+.|+|++|+|++. ..+..+++|++|+|++|++++. + .+..+++|+.|+|++|++++.
T Consensus 94 ~N~l~~l~~~--~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 94 RNRLKNLNGI--PS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SSCCSCCTTC--CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CCccCCcCcc--cc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 7777654332 22 6677777777777643 3466667777777777777643 2 466666777777777766644
Q ss_pred CcccCCCCCCCeEeccCCccccc
Q 039322 210 PPEIGSLVDLEYLDLSANRFNNS 232 (708)
Q Consensus 210 ~~~~~~~~~L~~L~l~~N~i~~~ 232 (708)
..+..+++|+.|++++|+++..
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHhccCCCCCEEeCCCCcccCC
Confidence 4566666666666666666643
No 366
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=1.7e-20 Score=194.61 Aligned_cols=237 Identities=11% Similarity=0.014 Sum_probs=139.0
Q ss_pred cEEeccCCccccccCccCcC--------CCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCC
Q 039322 76 QYFGVSENHFQGTIPKILRN--------CSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKL 147 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~--------l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 147 (708)
..+.+..|.| ...+|.+ +++|++|+|.+ +++.+...+|.++++|++|++++|.+..+.+.+|..+.++
T Consensus 75 ~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l 150 (329)
T 3sb4_A 75 KFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTA 150 (329)
T ss_dssp CCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCE
T ss_pred cccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCce
Confidence 4444444432 2455666 88888888887 7777777888888888888888888877888888777777
Q ss_pred CEEEcccCcc----cccCCccccCCCCCC-EEecccccc-cccCCcccCCCCCCCEEEccCccccccCCccc-CCCCCCC
Q 039322 148 GTLNVSMNNI----TGGIPREIGNSSQLQ-ALDLSLNHI-VGEIPKELGKLNSLTELILRGNQFTGRLPPEI-GSLVDLE 220 (708)
Q Consensus 148 ~~L~L~~N~i----~~~~~~~~~~l~~L~-~L~L~~n~l-~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~~~~L~ 220 (708)
..+.+..+.. ......+|.++.+|+ .+.+....- .......-....++..+.+.++-.. .....+ ..+++|+
T Consensus 151 ~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~ 229 (329)
T 3sb4_A 151 IFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLV 229 (329)
T ss_dssp EEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCC
T ss_pred EEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCe
Confidence 7666655322 233445566666666 444432211 0000011112345555555544221 111111 1245666
Q ss_pred eEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccc-hhhcccccCCCCCchhhcCcccCCceecccc
Q 039322 221 YLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLS-ELDASHNLFGGEIPFQICSLKSLEKLNLSHN 299 (708)
Q Consensus 221 ~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N 299 (708)
.|+|++|+++......|.++++|+.|+|.+| ++.+.+.+|.++.+|+ .|++.+ .++.+.+..|.++++|+.+++++|
T Consensus 230 ~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n 307 (329)
T 3sb4_A 230 SLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGD 307 (329)
T ss_dssp EEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSS
T ss_pred EEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCC
Confidence 6666666666555556666666666666665 5555556666666666 666666 555455566666666666666666
Q ss_pred cccCCCCCcccccccccEEe
Q 039322 300 NLSGSIPNCFEGIRGISVID 319 (708)
Q Consensus 300 ~l~~~~~~~~~~l~~L~~l~ 319 (708)
.++.+.+.+|.++++|+.++
T Consensus 308 ~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 308 KITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CCCEECTTTTCTTCCCCEEE
T ss_pred ccCccchhhhcCCcchhhhc
Confidence 66666666666666666654
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=4.7e-20 Score=184.29 Aligned_cols=171 Identities=22% Similarity=0.257 Sum_probs=128.2
Q ss_pred CCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEE
Q 039322 71 RGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTL 150 (708)
Q Consensus 71 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 150 (708)
.+.++..+++++|.+++.. .+.++++|++|++++|.|+.+. .+..+++|++|+|++|+++++.+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3456777788888887544 5777888888888888888654 57778888888888888877665 7788888888
Q ss_pred EcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCccc
Q 039322 151 NVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 151 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~ 230 (708)
+|++|+++...+ +.. ++|++|+|++|++++. ..+..+++|+.|+|++|++++. + .+..+++|++|+|++|+|+
T Consensus 91 ~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888875432 223 7788888888888753 3577788888888888888754 3 5777788888888888887
Q ss_pred ccCCCCCCccccceeecccCcccccC
Q 039322 231 NSVPENLGNLLKLHYLGLSNNQFVLE 256 (708)
Q Consensus 231 ~~~~~~~~~l~~L~~L~l~~n~l~~~ 256 (708)
+. ..+..+++|+.|++++|+++..
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 55 5677777888888888877744
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1e-18 Score=170.85 Aligned_cols=153 Identities=21% Similarity=0.167 Sum_probs=110.0
Q ss_pred CcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEeccc
Q 039322 99 LIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSL 178 (708)
Q Consensus 99 L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 178 (708)
-+.++.+++.++.++... .++|++|+|++|+++++.+..|..+++|+.|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~~ip~~~---~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGI---PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCSSCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcCccCCCC---CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 456777777777655432 26777888888887777777777777788888887777766666677777777777777
Q ss_pred ccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCccccc
Q 039322 179 NHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVL 255 (708)
Q Consensus 179 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 255 (708)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|++++|.+..
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 7777655566677777777777777777 566666777777777777777776555666677777777777777663
No 369
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.78 E-value=9.8e-18 Score=177.42 Aligned_cols=266 Identities=13% Similarity=0.124 Sum_probs=179.8
Q ss_pred CCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEc
Q 039322 25 LTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRL 104 (708)
Q Consensus 25 l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l 104 (708)
...++.+.+-.+ ++.+...+|...+|+.+.+..+ +.......|.. .+|+.+.+.. .++.+...+|.++++|++++|
T Consensus 112 ~~~l~~i~ip~~-i~~I~~~aF~~~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 112 LKGYNEIILPNS-VKSIPKDAFRNSQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp CSSCSEEECCTT-CCEECTTTTTTCCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred cCCccEEEECCc-cCEehHhhcccCCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 344555544432 3334444454445555555443 44444444544 3577777765 555566677777777777777
Q ss_pred cCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEeccccccccc
Q 039322 105 NSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGE 184 (708)
Q Consensus 105 ~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 184 (708)
.+|+++.+...+|. ..+|+.+.|.++ ++.+...+|.++++|+.++|.+| ++.+...+|.+ .+|+.+.+ .+.++..
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I 262 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNI 262 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEE
Confidence 77777777777776 467777777643 76777777777777887777764 55566677776 67777777 4446555
Q ss_pred CCcccCCCCCCCEEEccCcccc-----ccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCCh
Q 039322 185 IPKELGKLNSLTELILRGNQFT-----GRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPK 259 (708)
Q Consensus 185 ~~~~~~~l~~L~~L~l~~n~l~-----~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 259 (708)
...+|.++++|+.+.+.+|.+. .+.+.+|.++++|+.++|. +.++......|.++++|+.|.|..| ++.+...
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 6667777778888877776654 4566677888888888887 4476666777788888888888554 6656677
Q ss_pred hhhhhcccchhhcccccCCCCCchhhcCcc-cCCceeccccccc
Q 039322 260 ELEKLVQLSELDASHNLFGGEIPFQICSLK-SLEKLNLSHNNLS 302 (708)
Q Consensus 260 ~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~-~L~~L~l~~N~l~ 302 (708)
+|.++ +|+.|++++|.+.......|..++ ++..|++..+.+.
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 78877 888888888877766666676664 6777887777654
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=8.1e-19 Score=167.38 Aligned_cols=154 Identities=17% Similarity=0.259 Sum_probs=87.8
Q ss_pred ccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcE
Q 039322 22 VSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIR 101 (708)
Q Consensus 22 ~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~ 101 (708)
...+++|++|++++|.+.. ++ .+..+++|++|++++|.++. +..+..+++|++
T Consensus 40 ~~~l~~L~~L~l~~n~i~~------------------------l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~ 92 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVTD------------------------LT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLER 92 (197)
T ss_dssp HHHHHTCCEEEEESSCCSC------------------------CT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCE
T ss_pred hhhcCCccEEeccCCCccC------------------------hH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCE
Confidence 3667778888888887762 12 24445555555655554442 234555566666
Q ss_pred EEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCc-ccccCCccccCCCCCCEEeccccc
Q 039322 102 VRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNN-ITGGIPREIGNSSQLQALDLSLNH 180 (708)
Q Consensus 102 L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~n~ 180 (708)
|++++|.+++..+..|..+++|++|++++|++++..+..+..+++|++|+|++|. ++.. + .+..+++|++|++++|+
T Consensus 93 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBC
T ss_pred EEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCC
Confidence 6666666655555555566666666666666655444555556666666666665 4422 2 45666666666666666
Q ss_pred ccccCCcccCCCCCCCEEEccCcccc
Q 039322 181 IVGEIPKELGKLNSLTELILRGNQFT 206 (708)
Q Consensus 181 l~~~~~~~~~~l~~L~~L~l~~n~l~ 206 (708)
+++. + .+..+++|++|++++|++.
T Consensus 171 i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 171 VHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCCC-T-TGGGCSSCCEEEECBC---
T ss_pred CcCh-H-HhccCCCCCEEEeeCcccC
Confidence 6532 2 4556666666666666654
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=5.4e-19 Score=168.62 Aligned_cols=150 Identities=16% Similarity=0.176 Sum_probs=61.7
Q ss_pred CCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEe
Q 039322 96 CSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALD 175 (708)
Q Consensus 96 l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 175 (708)
+++|++|++++|.++.+. .+..+++|++|++++|.++.+ ..+..+++|++|++++|.+++..+..|..+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVTDLT--GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCccChH--HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 334444444444444222 233444444444444433221 1333444444444444444433344444444444444
Q ss_pred cccccccccCCcccCCCCCCCEEEccCcc-ccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCccc
Q 039322 176 LSLNHIVGEIPKELGKLNSLTELILRGNQ-FTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQF 253 (708)
Q Consensus 176 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l 253 (708)
|++|++++..+..+..+++|++|++++|. ++ .++ .+..+++|++|++++|++++. + .+..+++|+.|++++|+|
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 44444443333444444444444444444 33 222 344444444444444444421 1 334444444444444444
No 372
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.77 E-value=1.4e-17 Score=176.18 Aligned_cols=265 Identities=13% Similarity=0.084 Sum_probs=219.7
Q ss_pred CCcccccccCCCccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEc
Q 039322 49 PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDL 128 (708)
Q Consensus 49 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l 128 (708)
..++...+.. .++......|.. .+|+.+.+..+ ++.+...+|.++ +|++++|.+ .++.+...+|.++++|+.++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRN-SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhccc-CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 3455555543 455556667766 47999999877 776888889884 799999985 788899999999999999999
Q ss_pred ccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCcccccc
Q 039322 129 SRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGR 208 (708)
Q Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 208 (708)
++|+++.+...+|. ..+|+.+.|.++ ++.+...+|.++++|+.+++..| ++.....+|.+ .+|+.+.+. +.++.+
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I 262 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNI 262 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEE
Confidence 99999999999998 589999999854 88788899999999999999875 66566777887 799999995 456768
Q ss_pred CCcccCCCCCCCeEeccCCccc-----ccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCch
Q 039322 209 LPPEIGSLVDLEYLDLSANRFN-----NSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPF 283 (708)
Q Consensus 209 ~~~~~~~~~~L~~L~l~~N~i~-----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~ 283 (708)
...+|.++++|+.+++.+|.+. ......|.++++|+.+.|. +.++.+...+|.++.+|+.++|..| ++.....
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 8889999999999999998775 4667789999999999999 4587778889999999999999665 7667788
Q ss_pred hhcCcccCCceecccccccCCCCCcccccc-cccEEecCCCcCC
Q 039322 284 QICSLKSLEKLNLSHNNLSGSIPNCFEGIR-GISVIDISDNQLQ 326 (708)
Q Consensus 284 ~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~l~l~~N~l~ 326 (708)
.|.++ +|+.+++++|.+.......|.+++ .++.|++..+.+.
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 89998 999999999999888888888884 6788888766543
No 373
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.3e-18 Score=173.32 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=108.7
Q ss_pred cccccceeccccCccEEEEEe-CCCcE--EEEEEcCCCCCcc--------------------hhHhHHHHHHHHHHHHhc
Q 039322 437 DFDAQYCIGNGGHGSVYRAEL-PSGQV--VAIKKFHSPLPCD--------------------QIADQKEFLIEVKALTEI 493 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~-~~~~~--vavK~~~~~~~~~--------------------~~~~~~~~~~e~~~l~~l 493 (708)
-|++.+.||+|+||.||+|.. .+|+. ||||+++...... .......+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 467888999999999999977 68989 9999976532110 011224688999999999
Q ss_pred cCCce--eeEEEEEeeCCeeEEEEEeccC-C----CHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEE
Q 039322 494 RHRNI--VKFYGFCSHARHSFLVYELLER-G----SLAAILSSDTAAQELGWSQRMNVIKGVADALSYLH-HDCFPPIVH 565 (708)
Q Consensus 494 ~h~~i--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh-~~~~~~ivH 565 (708)
.|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.|++||| +. ||+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 88754 444443 356899999942 4 67766432 124467789999999999999 88 9999
Q ss_pred ccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 566 QDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 566 ~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
|||||+|||++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999754
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1e-21 Score=217.47 Aligned_cols=104 Identities=29% Similarity=0.286 Sum_probs=46.0
Q ss_pred CCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhccc
Q 039322 195 LTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASH 274 (708)
Q Consensus 195 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 274 (708)
|+.|+|++|.|++ +|. |..+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++ +| .|..+++|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 4444444444442 222 444444444444444444 334444444444444444444443 22 344444444444444
Q ss_pred ccCCCCC-chhhcCcccCCceecccccccC
Q 039322 275 NLFGGEI-PFQICSLKSLEKLNLSHNNLSG 303 (708)
Q Consensus 275 N~i~~~~-~~~~~~~~~L~~L~l~~N~l~~ 303 (708)
|.|++.. |..+..+++|+.|+|++|++++
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 4444333 4444444444444444444443
No 375
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=2.8e-21 Score=213.85 Aligned_cols=204 Identities=22% Similarity=0.205 Sum_probs=128.9
Q ss_pred cCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCc-------------cccccccccCCCCCCCEEE-cccCccee
Q 039322 70 CRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNN-------------LTGNISEALGIYPNLTFID-LSRNDFYG 135 (708)
Q Consensus 70 ~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~-------------i~~~~~~~~~~~~~L~~L~-l~~n~l~~ 135 (708)
..+++|+.|+|++|.++ .+|..++++++|+.|++++|. +.+..+..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 44566777777777776 567777777777777776554 3455566677777777777 5655442
Q ss_pred eCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCC
Q 039322 136 EISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGS 215 (708)
Q Consensus 136 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 215 (708)
+|+.+.+++|.|+...+ ..|+.|+|++|+|++ +|. ++.+++|+.|+|++|+|+ .+|..|+.
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 34455556666553322 136666777776664 444 666667777777777766 55666666
Q ss_pred CCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCC-ChhhhhhcccchhhcccccCCCCCch---hhcCcccC
Q 039322 216 LVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLEL-PKELEKLVQLSELDASHNLFGGEIPF---QICSLKSL 291 (708)
Q Consensus 216 ~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~ls~N~i~~~~~~---~~~~~~~L 291 (708)
+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..|..+++|+.|+|++|++++..+. .+..+|+|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 7777777777777764 34 5666677777777777776554 66677777777777777777654332 22336667
Q ss_pred Cceec
Q 039322 292 EKLNL 296 (708)
Q Consensus 292 ~~L~l 296 (708)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 66653
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=9.4e-19 Score=199.88 Aligned_cols=189 Identities=24% Similarity=0.247 Sum_probs=120.0
Q ss_pred EcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCcccc
Q 039322 127 DLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFT 206 (708)
Q Consensus 127 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 206 (708)
+++.|.+. +.+..|..+++|+.|+|++|.|. .++..+..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 44455555 56778888999999999999998 55666668999999999999998 78888999999999999999999
Q ss_pred ccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcc-cchhhcccccCCCCCchhh
Q 039322 207 GRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQ-LSELDASHNLFGGEIPFQI 285 (708)
Q Consensus 207 ~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~ls~N~i~~~~~~~~ 285 (708)
.+|..|..+++|++|+|++|.|+ .+|..|..+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++..|.
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~-- 359 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH-- 359 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc--
Confidence 77888999999999999999998 66777999999999999999999888888766533 34588999999876664
Q ss_pred cCcccCCceecccc--------cccCCCCCcccccccccEEecCCCcCC
Q 039322 286 CSLKSLEKLNLSHN--------NLSGSIPNCFEGIRGISVIDISDNQLQ 326 (708)
Q Consensus 286 ~~~~~L~~L~l~~N--------~l~~~~~~~~~~l~~L~~l~l~~N~l~ 326 (708)
.|+.|++++| .+.+..+..+..+..+....+++|.+.
T Consensus 360 ----~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 360 ----ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ----C-----------------------------------------CCC
T ss_pred ----ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 4556667766 333334444445555555666666554
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=2.3e-18 Score=178.47 Aligned_cols=285 Identities=13% Similarity=0.004 Sum_probs=197.6
Q ss_pred CCCcEEECCCCcccccCCccccC-CCCCCEEEeeCceee--eeCCCCCCCCCcccccccCCCccCCCCccccC-------
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSN-LTNLKELVLLYNNLS--GFIPPSLENPMLTRPGLDFNHFTSYLPHNVCR------- 71 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~-l~~L~~L~L~~n~i~--~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~------- 71 (708)
.+++.|.++++ +.......+.. +++|++|+|++|+|. ......+ +.+..+.+..|. .....|..
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~--~~~~~~~~~~~~---I~~~aF~~~~~~~~~ 98 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY--PNGKFYIYMANF---VPAYAFSNVVNGVTK 98 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS--GGGCCEEECTTE---ECTTTTEEEETTEEE
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc--cccccccccccc---cCHHHhccccccccc
Confidence 35788888875 33223334444 889999999999998 3333222 223444444443 34566777
Q ss_pred -CCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCc----ceeeCCCCCCCCCC
Q 039322 72 -GGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRND----FYGEISSNWGKCPK 146 (708)
Q Consensus 72 -l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~----l~~~~~~~~~~l~~ 146 (708)
+++|+.|+|.. .++.+.+.+|.++++|++|++.+|.++.+.+.+|..+.++..+.+..+. ...+...+|..+..
T Consensus 99 g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~ 177 (329)
T 3sb4_A 99 GKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEP 177 (329)
T ss_dssp ECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCC
T ss_pred ccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccc
Confidence 99999999999 8888888999999999999999999999999999999888888887743 23455667777777
Q ss_pred CC-EEEcccCc-ccccCCccccCCCCCCEEecccccccccCCccc-CCCCCCCEEEccCccccccCCcccCCCCCCCeEe
Q 039322 147 LG-TLNVSMNN-ITGGIPREIGNSSQLQALDLSLNHIVGEIPKEL-GKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLD 223 (708)
Q Consensus 147 L~-~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 223 (708)
|+ .+.+.... +.......-....+++.+.+.++-.. .....+ ..+++|++|+|++|+++.+.+.+|.++++|+.|+
T Consensus 178 L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~ 256 (329)
T 3sb4_A 178 LETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIK 256 (329)
T ss_dssp CEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEE
T ss_pred cceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEE
Confidence 77 55554432 11111111122455666666554222 111111 1367888888888878777777788888888888
Q ss_pred ccCCcccccCCCCCCccccce-eecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceec
Q 039322 224 LSANRFNNSVPENLGNLLKLH-YLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNL 296 (708)
Q Consensus 224 l~~N~i~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l 296 (708)
|++| ++...+..|.++++|+ .|++.+ .++.+.+.+|.++++|+.|++++|.++...+..|.++++|+.++.
T Consensus 257 l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 257 LPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 8877 7667777788888887 888877 666667778888888888888888887777777888888887763
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.8e-18 Score=164.13 Aligned_cols=130 Identities=25% Similarity=0.299 Sum_probs=83.5
Q ss_pred CEEecccccccccCCcccCCCCCCCEEEccCccccccCCc-ccCCCCCCCeEeccCCcccccCCCCCCccccceeecccC
Q 039322 172 QALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPP-EIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSN 250 (708)
Q Consensus 172 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~ 250 (708)
+++++++|+++ .+|..+.. +|++|++++|++++..+. .|..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777775 44544432 677777777777655443 366667777777777777666666666666777777777
Q ss_pred cccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCC
Q 039322 251 NQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGS 304 (708)
Q Consensus 251 n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~ 304 (708)
|+|++..+..|.++++|+.|+|++|+|++..|..+..+++|++|++++|++++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 776666666666666666666666666655566666666666666666666543
No 379
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=7.5e-18 Score=159.77 Aligned_cols=131 Identities=26% Similarity=0.344 Sum_probs=109.3
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEecccccccccCCc-ccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccC
Q 039322 148 GTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPK-ELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSA 226 (708)
Q Consensus 148 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 226 (708)
+.|++++|+++ .+|..+. .+|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67889999887 4454443 3789999999998866554 478889999999999999888888888899999999999
Q ss_pred CcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCC
Q 039322 227 NRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEI 281 (708)
Q Consensus 227 N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~ 281 (708)
|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++....
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 9998888888888899999999999998888888888889999999999887543
No 380
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=1.2e-18 Score=199.02 Aligned_cols=188 Identities=24% Similarity=0.244 Sum_probs=110.9
Q ss_pred ccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccc
Q 039322 104 LNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVG 183 (708)
Q Consensus 104 l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 183 (708)
+..|++. +.++.|..+++|++|+|++|.+..+.. .+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIFNISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCSCCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCCCCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3344444 557778888888888888888874443 4457888888888888888 67778888888888888888888
Q ss_pred cCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCcccc-ceeecccCcccccCCChhhh
Q 039322 184 EIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLK-LHYLGLSNNQFVLELPKELE 262 (708)
Q Consensus 184 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~ 262 (708)
.+|..|+.+++|++|+|++|.|+ .+|..|..+++|++|+|++|+|++..|..+..+.. +..|+|++|.+++.+|.
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~--- 359 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH--- 359 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc---
Confidence 66888888888888888888887 66777888888888888888888777776654422 23478888888877776
Q ss_pred hhcccchhhcccc--------cCCCCCchhhcCcccCCceeccccccc
Q 039322 263 KLVQLSELDASHN--------LFGGEIPFQICSLKSLEKLNLSHNNLS 302 (708)
Q Consensus 263 ~l~~L~~L~ls~N--------~i~~~~~~~~~~~~~L~~L~l~~N~l~ 302 (708)
.|..|+++.| .+.+..+..+..++.+....++.|-+.
T Consensus 360 ---~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 360 ---ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ---C-----------------------------------------CCC
T ss_pred ---ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 4455666666 333333334445555566666666654
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=2.1e-17 Score=156.63 Aligned_cols=112 Identities=29% Similarity=0.331 Sum_probs=63.2
Q ss_pred CCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecc
Q 039322 218 DLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLS 297 (708)
Q Consensus 218 ~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~ 297 (708)
+|++|+|++|.|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|.|++..+..|..+++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4444555555444 333444455555555555555554444455555555555555555555555555566666666666
Q ss_pred cccccCCCCCcccccccccEEecCCCcCCCCCC
Q 039322 298 HNNLSGSIPNCFEGIRGISVIDISDNQLQGPVP 330 (708)
Q Consensus 298 ~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 330 (708)
+|+|+...+..|..+++|+.|++++|++.|.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 666665555556666667777777777766544
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=9.4e-17 Score=148.80 Aligned_cols=132 Identities=27% Similarity=0.278 Sum_probs=77.6
Q ss_pred CCCcEEEccCCccc-cccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEe
Q 039322 97 SSLIRVRLNSNNLT-GNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALD 175 (708)
Q Consensus 97 ~~L~~L~l~~n~i~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 175 (708)
++|++|++++|.++ +..+..+..+++|++|++++|.++.+ ..+..+++|++|+|++|+++...|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 23334455555555666666555544 4555566666666666666654555555566666666
Q ss_pred cccccccccC-CcccCCCCCCCEEEccCccccccCC---cccCCCCCCCeEeccCCccc
Q 039322 176 LSLNHIVGEI-PKELGKLNSLTELILRGNQFTGRLP---PEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 176 L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~---~~~~~~~~L~~L~l~~N~i~ 230 (708)
|++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666666432 1456666666666666666664433 35666667777777766665
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.7e-16 Score=147.01 Aligned_cols=132 Identities=21% Similarity=0.174 Sum_probs=60.7
Q ss_pred CCccEEeccCCccc-cccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEE
Q 039322 73 GALQYFGVSENHFQ-GTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLN 151 (708)
Q Consensus 73 ~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (708)
++|++|++++|.++ +.+|..+..+++|+.|++++|.++++ ..|..+++|++|++++|++++..+..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34445555555444 33344444444555555555544443 3444444555555555544443333333444455555
Q ss_pred cccCcccccC-CccccCCCCCCEEecccccccccCC---cccCCCCCCCEEEccCcccc
Q 039322 152 VSMNNITGGI-PREIGNSSQLQALDLSLNHIVGEIP---KELGKLNSLTELILRGNQFT 206 (708)
Q Consensus 152 L~~N~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~l~~n~l~ 206 (708)
|++|.|++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5555444321 1344444445555555554443322 23444445555555544444
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=7.3e-16 Score=146.00 Aligned_cols=126 Identities=25% Similarity=0.295 Sum_probs=65.4
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccC
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMN 155 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 155 (708)
+++++++|.++ .+|..+. ++|++|+|++|+|+.++ ..|..+++|++|+|++|+|+.+.+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666666665 3444332 45666666666665333 45555555555555555555555555555555555555555
Q ss_pred cccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccc
Q 039322 156 NITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQF 205 (708)
Q Consensus 156 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 205 (708)
+|+...+..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 55544444555555555555555555433333344444444444444443
No 385
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.65 E-value=7.5e-15 Score=156.01 Aligned_cols=296 Identities=11% Similarity=0.019 Sum_probs=166.8
Q ss_pred ccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEEeccCC---------
Q 039322 14 FKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVSEN--------- 83 (708)
Q Consensus 14 i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~~n--------- 83 (708)
++++...+|.++.+|+++.|..+ ++.+...+|.. .+|+.+++..+ +.......|..+.+|+.+.+..+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF 136 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAF 136 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceee
Confidence 44455555555555555555432 44444445544 45555555432 33333444444444444443322
Q ss_pred ------------ccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEE
Q 039322 84 ------------HFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLN 151 (708)
Q Consensus 84 ------------~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (708)
.+......+|.++++|+++.+.++ +..+...+|.++.+|+.+++..| ++.+...+|.++..|+.+.
T Consensus 137 ~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~ 214 (394)
T 4fs7_A 137 KGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENME 214 (394)
T ss_dssp TTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCC
T ss_pred ecccccccccCccccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceee
Confidence 111233445556666666666533 23355556666666666666544 4445555666666666665
Q ss_pred cccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccc
Q 039322 152 VSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNN 231 (708)
Q Consensus 152 L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~ 231 (708)
+..+... . .+.+....+|+.+.+..+ ++......+..+.+|+.+.+..+... +....|..+..++.+.+..+.+.
T Consensus 215 ~~~~~~~-i-~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~- 289 (394)
T 4fs7_A 215 FPNSLYY-L-GDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP- 289 (394)
T ss_dssp CCTTCCE-E-CTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC-
T ss_pred cCCCceE-e-ehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec-
Confidence 5554432 1 222233345666655433 22233445666667777777666544 55566666667776666655432
Q ss_pred cCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccc
Q 039322 232 SVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEG 311 (708)
Q Consensus 232 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~ 311 (708)
...|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|..+ ++......|.++.+|+.+.+..| ++.+...+|.+
T Consensus 290 --~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~ 364 (394)
T 4fs7_A 290 --EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQG 364 (394)
T ss_dssp --TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTT
T ss_pred --cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhC
Confidence 235666777777777654 55456667777777777777643 55556667777777887777666 66666777777
Q ss_pred cccccEEecCCC
Q 039322 312 IRGISVIDISDN 323 (708)
Q Consensus 312 l~~L~~l~l~~N 323 (708)
+.+|+.+++..+
T Consensus 365 C~~L~~i~lp~~ 376 (394)
T 4fs7_A 365 CINLKKVELPKR 376 (394)
T ss_dssp CTTCCEEEEEGG
T ss_pred CCCCCEEEECCC
Confidence 777777777543
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1.6e-15 Score=141.73 Aligned_cols=109 Identities=23% Similarity=0.216 Sum_probs=48.0
Q ss_pred CCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEecc
Q 039322 146 KLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLS 225 (708)
Q Consensus 146 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 225 (708)
+|+.|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 33444444444433333333444444444444444443333333444444444444444443333334444455555555
Q ss_pred CCcccccCCCCCCccccceeecccCcccc
Q 039322 226 ANRFNNSVPENLGNLLKLHYLGLSNNQFV 254 (708)
Q Consensus 226 ~N~i~~~~~~~~~~l~~L~~L~l~~n~l~ 254 (708)
+|++++..+..+..+++|+.|++++|.+.
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 55554333333444555555555555554
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=2.3e-15 Score=140.63 Aligned_cols=109 Identities=23% Similarity=0.217 Sum_probs=56.2
Q ss_pred CCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEcc
Q 039322 122 NLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILR 201 (708)
Q Consensus 122 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 201 (708)
+|++|++++|+++++.+..|..+++|++|++++|+|+...+..|..+++|++|+|++|++++..+..+..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 44444444444444444444444555555555555544444444555555555555555554444444555555555555
Q ss_pred CccccccCCcccCCCCCCCeEeccCCccc
Q 039322 202 GNQFTGRLPPEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 202 ~n~l~~~~~~~~~~~~~L~~L~l~~N~i~ 230 (708)
+|++++..+..|..+++|++|+|++|+++
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 55555444444455566666666666555
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=2.4e-16 Score=142.82 Aligned_cols=127 Identities=24% Similarity=0.225 Sum_probs=61.7
Q ss_pred CCCCEEEcccCccc-ccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEe
Q 039322 145 PKLGTLNVSMNNIT-GGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLD 223 (708)
Q Consensus 145 ~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 223 (708)
++|+.|++++|.++ +..|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34444444444444 33344444444555555555544432 3344445555555555555533444444455555555
Q ss_pred ccCCccccc-CCCCCCccccceeecccCcccccCCC---hhhhhhcccchhhcc
Q 039322 224 LSANRFNNS-VPENLGNLLKLHYLGLSNNQFVLELP---KELEKLVQLSELDAS 273 (708)
Q Consensus 224 l~~N~i~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~ls 273 (708)
+++|++++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555555532 12445555555555555555554443 345555555555544
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=6e-16 Score=159.48 Aligned_cols=141 Identities=11% Similarity=0.117 Sum_probs=102.9
Q ss_pred cccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCc--------------chhH----hHHHHHHHHHHHHhccCCce
Q 039322 437 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPC--------------DQIA----DQKEFLIEVKALTEIRHRNI 498 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~--------------~~~~----~~~~~~~e~~~l~~l~h~~i 498 (708)
=|++.+.||+|++|.||+|...+|+.||||+++..... .... ......+|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 48899999999999999999889999999997642110 0000 01123456777777765544
Q ss_pred e--eEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 039322 499 V--KFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLD 576 (708)
Q Consensus 499 v--~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 576 (708)
. ..+++ . ..++||||++|++|.++... +....++.|++.+|.+||+. |||||||||.|||++
T Consensus 176 ~vp~p~~~--~--~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 176 PVPEPIAQ--S--RHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR 239 (397)
T ss_dssp SCCCEEEE--E--TTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred CCCeeeec--c--CceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 2 23322 1 23799999999888765421 23456889999999999999 999999999999998
Q ss_pred CCC----------cEEEeecccccccC
Q 039322 577 LEY----------EAHVADFGIAKFLK 593 (708)
Q Consensus 577 ~~~----------~~kl~Dfg~a~~~~ 593 (708)
+++ .+.|+||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 876 38999999876543
No 390
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=3.3e-16 Score=141.88 Aligned_cols=128 Identities=25% Similarity=0.277 Sum_probs=89.1
Q ss_pred CCCCEEEccCcccc-ccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhh
Q 039322 193 NSLTELILRGNQFT-GRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELD 271 (708)
Q Consensus 193 ~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 271 (708)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|++++|++++..|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56666666666666 45566666667777777777777644 5566777777777777777765666666777777777
Q ss_pred cccccCCCC-CchhhcCcccCCceecccccccCCCC---CcccccccccEEecCC
Q 039322 272 ASHNLFGGE-IPFQICSLKSLEKLNLSHNNLSGSIP---NCFEGIRGISVIDISD 322 (708)
Q Consensus 272 ls~N~i~~~-~~~~~~~~~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~l~l~~ 322 (708)
+++|.+++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 777777753 23667777788888888888776555 4677777888777763
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=1.1e-15 Score=142.74 Aligned_cols=132 Identities=22% Similarity=0.156 Sum_probs=65.0
Q ss_pred CcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCC
Q 039322 93 LRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQ 172 (708)
Q Consensus 93 ~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 172 (708)
+.++++|++|++++|+++.+ +......++|++|++++|+++++ ..|..+++|+.|+|++|+|++..+..|..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 44455555555555555543 22222223555666666555544 3455555566666666655544434445555555
Q ss_pred EEecccccccccCCc--ccCCCCCCCEEEccCccccccCCc----ccCCCCCCCeEeccCCcc
Q 039322 173 ALDLSLNHIVGEIPK--ELGKLNSLTELILRGNQFTGRLPP----EIGSLVDLEYLDLSANRF 229 (708)
Q Consensus 173 ~L~L~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~----~~~~~~~L~~L~l~~N~i 229 (708)
+|+|++|+|+ .++. .+..+++|+.|++++|.++ ..|. .+..+++|+.|++++|.+
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 5555555554 2222 3444555555555555554 2222 134444444444444443
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.58 E-value=7.8e-14 Score=148.13 Aligned_cols=301 Identities=11% Similarity=0.039 Sum_probs=237.1
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCC-CCcccccccCC---------------------
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFN--------------------- 59 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n--------------------- 59 (708)
++|+.+.|.. .++.+...+|.++.+|+.++|..+ +..+...+|.. .+|+.+.+..+
T Consensus 71 ~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~ 148 (394)
T 4fs7_A 71 RKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPE 148 (394)
T ss_dssp TTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCT
T ss_pred CCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccCc
Confidence 5789999975 488899999999999999999866 55565666655 56666555432
Q ss_pred CccCCCCccccCCCCccEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCC
Q 039322 60 HFTSYLPHNVCRGGALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISS 139 (708)
Q Consensus 60 ~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 139 (708)
.+.......|..+.+|+.+.+..+..+ +....|.++.+|+.+++..| ++.+...+|.++..|+.+.+..+... +...
T Consensus 149 ~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i~~~ 225 (394)
T 4fs7_A 149 GVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-LGDF 225 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-ECTT
T ss_pred cccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-eehh
Confidence 111223456777889999999876544 77888999999999999876 77788999999999999999877543 4443
Q ss_pred CCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCC
Q 039322 140 NWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDL 219 (708)
Q Consensus 140 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 219 (708)
+....+|+.+.+..+ ++.+...+|..+..|+.+.+..+... .....|..++.++.+....+.+ ....|..+.+|
T Consensus 226 -~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L 299 (394)
T 4fs7_A 226 -ALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSL 299 (394)
T ss_dssp -TTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTC
T ss_pred -hcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccc
Confidence 344578999999754 45577788999999999999888655 6677889999999999887654 34578899999
Q ss_pred CeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccc
Q 039322 220 EYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHN 299 (708)
Q Consensus 220 ~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N 299 (708)
+.+.+..+ ++......|.++.+|+.+++.++ ++.+...+|.++.+|+.+++..| ++.....+|.++++|+.+++..+
T Consensus 300 ~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 300 TEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 99999866 66677788999999999999755 77677889999999999999877 77677889999999999999765
Q ss_pred cccCCCCCcccccccccEE
Q 039322 300 NLSGSIPNCFEGIRGISVI 318 (708)
Q Consensus 300 ~l~~~~~~~~~~l~~L~~l 318 (708)
++ ....+|.+.++|+.+
T Consensus 377 -~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 377 -LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp -GG-GGGGGBCTTCEEEEE
T ss_pred -CE-EhhheecCCCCCcEE
Confidence 44 335678888888764
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=3.1e-15 Score=139.60 Aligned_cols=134 Identities=10% Similarity=0.057 Sum_probs=103.0
Q ss_pred cccCCCCccEEeccCCccccccCccCcCC-CCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCC
Q 039322 68 NVCRGGALQYFGVSENHFQGTIPKILRNC-SSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPK 146 (708)
Q Consensus 68 ~~~~l~~L~~L~l~~n~i~~~~~~~~~~l-~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 146 (708)
.+....+|+.|++++|+++. ++. +..+ ++|+.|+|++|.|+++ ..|..+++|++|++++|+++++.+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 34556788888888888884 344 4444 4888888888888876 57888888888888888888776666688888
Q ss_pred CCEEEcccCcccccCC-ccccCCCCCCEEecccccccccCCc----ccCCCCCCCEEEccCcccc
Q 039322 147 LGTLNVSMNNITGGIP-REIGNSSQLQALDLSLNHIVGEIPK----ELGKLNSLTELILRGNQFT 206 (708)
Q Consensus 147 L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~l~~L~~L~l~~n~l~ 206 (708)
|+.|+|++|+|+...+ ..+..+++|+.|++++|.++ ..+. .+..+++|+.|++++|.+.
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 8888888888874332 26788888888888888887 4444 3778888899988888776
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=6.4e-17 Score=154.30 Aligned_cols=156 Identities=22% Similarity=0.240 Sum_probs=113.8
Q ss_pred cCCCCCCEEecccccccccCCc------ccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCc
Q 039322 166 GNSSQLQALDLSLNHIVGEIPK------ELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGN 239 (708)
Q Consensus 166 ~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~ 239 (708)
.....++.++++.|.+.+..|. .+..+++|++|+|++|.+++ +| .+..+++|++|++++|+++ ..|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3445566666666666655554 67777788888888888774 45 6777788888888888887 55666667
Q ss_pred cccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCc-hhhcCcccCCceecccccccCCCCCc----------
Q 039322 240 LLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIP-FQICSLKSLEKLNLSHNNLSGSIPNC---------- 308 (708)
Q Consensus 240 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~-~~~~~~~~L~~L~l~~N~l~~~~~~~---------- 308 (708)
+++|+.|++++|++++ +| .+..+++|+.|++++|.+++..+ ..+..+++|++|++++|++++..|..
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 169 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV 169 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHH
Confidence 7888888888888875 33 58888888888888888875332 46778888999999999887665542
Q ss_pred ccccccccEEecCCCcCCCC
Q 039322 309 FEGIRGISVIDISDNQLQGP 328 (708)
Q Consensus 309 ~~~l~~L~~l~l~~N~l~~~ 328 (708)
+..+++|+.|| +|+++..
T Consensus 170 ~~~l~~L~~Ld--~~~i~~~ 187 (198)
T 1ds9_A 170 VKRLPNLKKLD--GMPVDVD 187 (198)
T ss_dssp HHHCSSCSEEC--CGGGTTT
T ss_pred HHhCCCcEEEC--CcccCHH
Confidence 67788888876 6766643
No 395
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.53 E-value=1e-12 Score=139.55 Aligned_cols=299 Identities=9% Similarity=0.058 Sum_probs=143.5
Q ss_pred ccccCCccccCCC-CCCEEEeeCceeeeeCCCCCCC-CCcccccccCCC---ccCCCCccccCCCCccEEeccCCccccc
Q 039322 14 FKGVLPPSVSNLT-NLKELVLLYNNLSGFIPPSLEN-PMLTRPGLDFNH---FTSYLPHNVCRGGALQYFGVSENHFQGT 88 (708)
Q Consensus 14 i~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~-~~l~~l~l~~n~---~~~~~~~~~~~l~~L~~L~l~~n~i~~~ 88 (708)
++++...+|.+.+ .|+.+.+-.+ ++.+...+|.. .+|+.+.++.|. ++......|....+|+.+.+..+ ++.+
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 4445555555553 3566655433 44445555554 555555555442 44444455555555665555443 3334
Q ss_pred cCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCC
Q 039322 89 IPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNS 168 (708)
Q Consensus 89 ~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l 168 (708)
....|.++.+|+.+.+.. .++.+...+|..+.+|+.+.+.++ +..+...+|.. .+|+.+.+..+-.. ....+|..+
T Consensus 129 ~~~aF~~c~~L~~i~lp~-~~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c 204 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPE-GVTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSEC 204 (394)
T ss_dssp CTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTC
T ss_pred hhhhhhhhcccccccccc-eeeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhc
Confidence 455566666666666653 334455566666666666666543 44455555543 34666666543322 445555555
Q ss_pred CCCCEEecccccccccCCc-------------ccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCC
Q 039322 169 SQLQALDLSLNHIVGEIPK-------------ELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPE 235 (708)
Q Consensus 169 ~~L~~L~L~~n~l~~~~~~-------------~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~ 235 (708)
.+++......+........ .+.....+..+.+.. .++.+...+|.++.+|+.+.+..+..+ ....
T Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~ 282 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTG 282 (394)
T ss_dssp TTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTT
T ss_pred cccceecccccccccccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce-ecCc
Confidence 5555555443332210000 001112233333322 222233344555555555555443332 3344
Q ss_pred CCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccc
Q 039322 236 NLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGI 315 (708)
Q Consensus 236 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L 315 (708)
.|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+....|.++.+|+.+.|..+ ++.+...+|.++.+|
T Consensus 283 aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L 359 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTAL 359 (394)
T ss_dssp TTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTC
T ss_pred ccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCC
Confidence 45555555555553 2333344444555555555555432 33333444555555555555332 444444555555555
Q ss_pred cEEecCCC
Q 039322 316 SVIDISDN 323 (708)
Q Consensus 316 ~~l~l~~N 323 (708)
+.+++.+|
T Consensus 360 ~~i~~~~~ 367 (394)
T 4gt6_A 360 NNIEYSGS 367 (394)
T ss_dssp CEEEESSC
T ss_pred CEEEECCc
Confidence 55555544
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=6e-17 Score=154.48 Aligned_cols=132 Identities=23% Similarity=0.222 Sum_probs=84.7
Q ss_pred cccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccc
Q 039322 164 EIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKL 243 (708)
Q Consensus 164 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L 243 (708)
.|..+++|++|+|++|++++ +| .+..+++|+.|++++|.++ .+|..+..+++|++|++++|++++ .| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 56666666666666666664 34 5666666666666666666 455555555667777777777764 23 46666777
Q ss_pred eeecccCcccccCCC-hhhhhhcccchhhcccccCCCCCch----------hhcCcccCCceeccccccc
Q 039322 244 HYLGLSNNQFVLELP-KELEKLVQLSELDASHNLFGGEIPF----------QICSLKSLEKLNLSHNNLS 302 (708)
Q Consensus 244 ~~L~l~~n~l~~~~~-~~~~~l~~L~~L~ls~N~i~~~~~~----------~~~~~~~L~~L~l~~N~l~ 302 (708)
+.|++++|+++...+ ..+..+++|+.|++++|++.+..|. .+..+++|+.|+ +|+++
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 777777777764322 3566777777777777777644332 266677788776 66665
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.6e-13 Score=126.92 Aligned_cols=104 Identities=17% Similarity=0.134 Sum_probs=56.7
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccC
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMN 155 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 155 (708)
+.+++++|.++ .+|..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 45666666665 3443332 55555555555555555555555555555555555555555555555555555555555
Q ss_pred cccccCCccccCCCCCCEEeccccccc
Q 039322 156 NITGGIPREIGNSSQLQALDLSLNHIV 182 (708)
Q Consensus 156 ~i~~~~~~~~~~l~~L~~L~L~~n~l~ 182 (708)
+|++..+..|..+++|++|+|++|.+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 555444444555555555555555544
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=2.6e-13 Score=125.93 Aligned_cols=104 Identities=16% Similarity=0.157 Sum_probs=57.5
Q ss_pred cEEeccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccC
Q 039322 76 QYFGVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMN 155 (708)
Q Consensus 76 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 155 (708)
+.+++++|.++ .+|..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 55666666665 3444333 55666666666666555555555555555555555555555555555555555555555
Q ss_pred cccccCCccccCCCCCCEEeccccccc
Q 039322 156 NITGGIPREIGNSSQLQALDLSLNHIV 182 (708)
Q Consensus 156 ~i~~~~~~~~~~l~~L~~L~L~~n~l~ 182 (708)
+|+...+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555444444555555555555555544
No 399
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.46 E-value=5.8e-12 Score=133.67 Aligned_cols=309 Identities=12% Similarity=0.098 Sum_probs=225.9
Q ss_pred CCcEEECCCCcccccCCccccCCCCCCEEEeeCce---eeeeCCCCCCC-CCcccccccCCCccCCCCccccCCCCccEE
Q 039322 3 SLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNN---LSGFIPPSLEN-PMLTRPGLDFNHFTSYLPHNVCRGGALQYF 78 (708)
Q Consensus 3 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~---i~~~~~~~~~~-~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L 78 (708)
.|+.+.|..+ ++.+...+|.++.+|+.+.++.|. ++.+...+|.. .+|+.+.+..+ ++......+....+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 3778888754 788899999999999999998774 66666777766 67888777654 556567778888999999
Q ss_pred eccCCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccCccc
Q 039322 79 GVSENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNIT 158 (708)
Q Consensus 79 ~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~ 158 (708)
.+..+. +.+....|.++.+|+.+.+.++ ++.+...+|.. .+|+.+.+..+ +..+...+|..+.++.......+...
T Consensus 143 ~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~-~~~i~~~af~~c~~l~~~~~~~~~~~ 218 (394)
T 4gt6_A 143 TIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAK-VTRIGTNAFSECFALSTITSDSESYP 218 (394)
T ss_dssp ECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTT-CCEECTTTTTTCTTCCEEEECCSSSC
T ss_pred ccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCc-ccccccchhhhccccceecccccccc
Confidence 997654 4477788999999999999755 66677888865 57999998765 44588888999999998887766554
Q ss_pred ccCCccc-------------cCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEecc
Q 039322 159 GGIPREI-------------GNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLS 225 (708)
Q Consensus 159 ~~~~~~~-------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 225 (708)
......+ .....+..+.+.. .++.....+|.++.+|+.+.+.++..+ +...+|.++++|+.+.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~ 296 (394)
T 4gt6_A 219 AIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS 296 (394)
T ss_dssp BSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC
T ss_pred cccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC
Confidence 2221111 1223344454432 344355667888999999999877655 777889999999999996
Q ss_pred CCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCC
Q 039322 226 ANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSI 305 (708)
Q Consensus 226 ~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~ 305 (708)
+.++......|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.....+|.++++|+.+++.+|....
T Consensus 297 -~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~-- 371 (394)
T 4gt6_A 297 -SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW-- 371 (394)
T ss_dssp -TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH--
T ss_pred -CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh--
Confidence 4566577778999999999999865 66577788999999999999754 666778889999999999999886642
Q ss_pred CCcccccccccEEecCCCcC
Q 039322 306 PNCFEGIRGISVIDISDNQL 325 (708)
Q Consensus 306 ~~~~~~l~~L~~l~l~~N~l 325 (708)
.++....+|+.+.+..|.+
T Consensus 372 -~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 372 -NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp -HTCBCCCCC----------
T ss_pred -hhhhccCCCCEEEeCCCCE
Confidence 3566677788877766544
No 400
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=3.2e-13 Score=124.90 Aligned_cols=104 Identities=25% Similarity=0.195 Sum_probs=62.6
Q ss_pred CEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCc
Q 039322 124 TFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGN 203 (708)
Q Consensus 124 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 203 (708)
++|++++|+++.+.... .++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~ip~~~---~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLASVPTGI---PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSSCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCccCccC---CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 45555555555433222 145666666666666555556666666666666666666555555566666666666666
Q ss_pred cccccCCcccCCCCCCCeEeccCCccc
Q 039322 204 QFTGRLPPEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 204 ~l~~~~~~~~~~~~~L~~L~l~~N~i~ 230 (708)
+|++..+..|..+++|++|+|++|+++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 666555555666667777777777666
No 401
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=6e-13 Score=123.48 Aligned_cols=104 Identities=20% Similarity=0.172 Sum_probs=56.1
Q ss_pred CEEEcccCcceeeCCCCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCc
Q 039322 124 TFIDLSRNDFYGEISSNWGKCPKLGTLNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGN 203 (708)
Q Consensus 124 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 203 (708)
+.+++++|+++.++.. +. ++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~~iP~~-~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAG-IP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSSCCSC-CC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCccCCC-cC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3444555544433221 11 45555555555555555555555555555555555555444444555566666666666
Q ss_pred cccccCCcccCCCCCCCeEeccCCccc
Q 039322 204 QFTGRLPPEIGSLVDLEYLDLSANRFN 230 (708)
Q Consensus 204 ~l~~~~~~~~~~~~~L~~L~l~~N~i~ 230 (708)
+|++..+..|..+++|++|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666444444666666666666666665
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.36 E-value=3.5e-15 Score=156.26 Aligned_cols=88 Identities=22% Similarity=0.228 Sum_probs=37.8
Q ss_pred CCCCEEeccccccccc----CCcccCCCCCCCEEEccCcccccc----CCcccCCCCCCCeEeccCCcccccCC----CC
Q 039322 169 SQLQALDLSLNHIVGE----IPKELGKLNSLTELILRGNQFTGR----LPPEIGSLVDLEYLDLSANRFNNSVP----EN 236 (708)
Q Consensus 169 ~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~N~i~~~~~----~~ 236 (708)
++|++|+|++|.|+.. ++..+...++|++|+|++|.|+.. ++..+...++|++|+|++|.|+.... ..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 4444444444444321 122223344455555555544421 12233344455555555555543211 12
Q ss_pred CCccccceeecccCcccccC
Q 039322 237 LGNLLKLHYLGLSNNQFVLE 256 (708)
Q Consensus 237 ~~~l~~L~~L~l~~n~l~~~ 256 (708)
+...++|+.|+|++|.|+..
T Consensus 235 L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHCSSCCEEECTTSSCCHH
T ss_pred HHhCCCCCEEeccCCCCCHH
Confidence 22334555555555555433
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=9.8e-15 Score=152.85 Aligned_cols=143 Identities=18% Similarity=0.125 Sum_probs=88.3
Q ss_pred CCCCEEEcccCcccccCCccc-cCCCCCCEEecccccccccCCccc-----CCCCCCCEEEccCcccccc----CCcccC
Q 039322 145 PKLGTLNVSMNNITGGIPREI-GNSSQLQALDLSLNHIVGEIPKEL-----GKLNSLTELILRGNQFTGR----LPPEIG 214 (708)
Q Consensus 145 ~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~~----~~~~~~ 214 (708)
++|++|+|++|.|+......+ ..+++|+.|+|++|+|+......+ ...++|++|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 456666666666553322222 223567777777777764333333 3457788888888887632 333445
Q ss_pred CCCCCCeEeccCCcccccC----CCCCCccccceeecccCcccccCCC----hhhhhhcccchhhcccccCCCCCchhhc
Q 039322 215 SLVDLEYLDLSANRFNNSV----PENLGNLLKLHYLGLSNNQFVLELP----KELEKLVQLSELDASHNLFGGEIPFQIC 286 (708)
Q Consensus 215 ~~~~L~~L~l~~N~i~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~ls~N~i~~~~~~~~~ 286 (708)
.+++|++|+|++|.|+... ...+...++|+.|+|++|.|+.... ..+...++|+.|+|++|.|++.....+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 6777888888888877432 3345566778888888888865322 3344557788888888888765544444
Q ss_pred C
Q 039322 287 S 287 (708)
Q Consensus 287 ~ 287 (708)
.
T Consensus 261 ~ 261 (372)
T 3un9_A 261 D 261 (372)
T ss_dssp H
T ss_pred H
Confidence 3
No 404
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.34 E-value=9.5e-11 Score=123.65 Aligned_cols=128 Identities=13% Similarity=0.057 Sum_probs=53.5
Q ss_pred cCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcccccCCCCCCccccceeecccCcccccCCChhhhhhcccc
Q 039322 189 LGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLS 268 (708)
Q Consensus 189 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 268 (708)
+....+|+.+.+..+ ++.+....|.++.+|+.+.+..+ ++......|.++.+|+.+.+..+ ++.+...+|.++.+|+
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 333444444444333 22233334444444444444433 33233334444444444444322 2223333444444444
Q ss_pred hhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcccccccccEEec
Q 039322 269 ELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGIRGISVIDI 320 (708)
Q Consensus 269 ~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 320 (708)
.+.+.++.++......|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+
T Consensus 290 ~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 290 KVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp EEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred cccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 4444444444333444444444444444322 33333444444444444444
No 405
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=1.3e-11 Score=123.19 Aligned_cols=146 Identities=12% Similarity=0.065 Sum_probs=114.1
Q ss_pred HHHhccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCe
Q 039322 432 VRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARH 510 (708)
Q Consensus 432 ~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~ 510 (708)
......|++....+.|+.+.||++... ++.+++|....... .....+.+|+++++.+. +..++++++++...+.
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~----~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~ 84 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK----GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW 84 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT----TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC----CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc
Confidence 344567888888998999999999864 68899999864211 11235788999999884 6778899999999899
Q ss_pred eEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------
Q 039322 511 SFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC------------------------------- 559 (708)
Q Consensus 511 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~------------------------------- 559 (708)
.|+||||++|.++.+.+. +......++.+++++++.||+..
T Consensus 85 ~~lv~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred eEEEEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 999999999999987642 11223478899999999999811
Q ss_pred -------------------------CCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 560 -------------------------FPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 560 -------------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
.+.++|||+++.||+++++..+.|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 0358999999999999876666799999875
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=1.3e-11 Score=128.73 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=72.9
Q ss_pred EEeccCC-ccccccCccCcCCCCCcEEEccC-CccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEccc
Q 039322 77 YFGVSEN-HFQGTIPKILRNCSSLIRVRLNS-NNLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSM 154 (708)
Q Consensus 77 ~L~l~~n-~i~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 154 (708)
.++++++ +++ .+|. +..+++|++|+|++ |.|+++++..|..+++|++|+|++|+|+++.+..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577776 676 4555 77777777777775 777777777777777777777777777777777777777777777777
Q ss_pred CcccccCCccccCCCCCCEEeccccccc
Q 039322 155 NNITGGIPREIGNSSQLQALDLSLNHIV 182 (708)
Q Consensus 155 N~i~~~~~~~~~~l~~L~~L~L~~n~l~ 182 (708)
|+|++..+..|..++ |+.|+|++|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777765555555554 777777777665
No 407
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=2.6e-11 Score=126.40 Aligned_cols=103 Identities=19% Similarity=0.199 Sum_probs=65.2
Q ss_pred EEEcccC-cccccCCccccCCCCCCEEeccc-ccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccC
Q 039322 149 TLNVSMN-NITGGIPREIGNSSQLQALDLSL-NHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSA 226 (708)
Q Consensus 149 ~L~L~~N-~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 226 (708)
.++++++ +|+. +|. +..+++|++|+|++ |+|++..+..|.++++|+.|+|++|+|+++.+..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3566665 5653 444 66666666666664 666655555666666666666666666666666666666677777777
Q ss_pred CcccccCCCCCCccccceeecccCcccc
Q 039322 227 NRFNNSVPENLGNLLKLHYLGLSNNQFV 254 (708)
Q Consensus 227 N~i~~~~~~~~~~l~~L~~L~l~~n~l~ 254 (708)
|+|++..+..|..++ |+.|+|++|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 766655555555444 777777777665
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.25 E-value=1.1e-09 Score=115.58 Aligned_cols=299 Identities=12% Similarity=0.057 Sum_probs=213.3
Q ss_pred CCCcEEECCCCcccccCCccccCCCCCCEEEeeCceeeeeCCCCCCCCCcccccccCCCccCCCCccccCCCCccEEecc
Q 039322 2 RSLSILDLNQNQFKGVLPPSVSNLTNLKELVLLYNNLSGFIPPSLENPMLTRPGLDFNHFTSYLPHNVCRGGALQYFGVS 81 (708)
Q Consensus 2 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~l~ 81 (708)
++|+.+.+.. .++.+...+|.++.+|+.+.|..+ ++.+...+|...+|+.+.+..+ +.......|.. .+|+.+.+.
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp 121 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADTKLQSYTGMER-VKKFGDYVFQG-TDLDDFEFP 121 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCCCCEEEECTT-CCEECTTTTTT-CCCSEEECC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCCCCceEECCce-eeEeccceecc-CCcccccCC
Confidence 3567777764 588899999999999999999765 6667778888777777776543 55544455544 579999998
Q ss_pred CCccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcceeeC------------CCCCCCCCCCCE
Q 039322 82 ENHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDFYGEI------------SSNWGKCPKLGT 149 (708)
Q Consensus 82 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~------------~~~~~~l~~L~~ 149 (708)
.+. +......|.+. +|+.+.+-. .++.+...+|..+.+++.+.+..+...... ...+.....+..
T Consensus 122 ~~~-~~i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
T 4h09_A 122 GAT-TEIGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTE 198 (379)
T ss_dssp TTC-CEECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSE
T ss_pred Ccc-ccccccccccc-eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceeccccccccccc
Confidence 764 33666667665 677777664 466677888999999998888765432111 112344456666
Q ss_pred EEcccCcccccCCccccCCCCCCEEecccccccccCCcccCCCCCCCEEEccCccccccCCcccCCCCCCCeEeccCCcc
Q 039322 150 LNVSMNNITGGIPREIGNSSQLQALDLSLNHIVGEIPKELGKLNSLTELILRGNQFTGRLPPEIGSLVDLEYLDLSANRF 229 (708)
Q Consensus 150 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~N~i 229 (708)
+.+..+.- ......+....+|+.+.+..+ +......+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ +
T Consensus 199 ~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i 274 (379)
T 4h09_A 199 FTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-V 274 (379)
T ss_dssp EECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-C
T ss_pred ccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-c
Confidence 66654433 355667777888888888655 44355667788888888888776 55566777888888888888654 5
Q ss_pred cccCCCCCCccccceeecccCcccccCCChhhhhhcccchhhcccccCCCCCchhhcCcccCCceecccccccCCCCCcc
Q 039322 230 NNSVPENLGNLLKLHYLGLSNNQFVLELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCF 309 (708)
Q Consensus 230 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~ 309 (708)
+......|.++++|+.+.+.++.++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|
T Consensus 275 ~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF 352 (379)
T 4h09_A 275 KTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAF 352 (379)
T ss_dssp SEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTT
T ss_pred eeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHh
Confidence 5466677888888888888888887777788888888888888654 66566777888888888888654 665666777
Q ss_pred cccc
Q 039322 310 EGIR 313 (708)
Q Consensus 310 ~~l~ 313 (708)
.+..
T Consensus 353 ~~c~ 356 (379)
T 4h09_A 353 EGSS 356 (379)
T ss_dssp TTSS
T ss_pred hCCC
Confidence 6653
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.13 E-value=6.9e-11 Score=117.73 Aligned_cols=138 Identities=17% Similarity=0.123 Sum_probs=101.9
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc--eeeEEEEEeeCCeeEE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--IVKFYGFCSHARHSFL 513 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~--iv~l~~~~~~~~~~~l 513 (708)
.++.+....+.|..+.||++...+|+.+++|..... ....+..|+++++.+.+.+ +++++++...++..++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 445544344466679999998777888999997642 1234677899998886544 5668998888888999
Q ss_pred EEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 039322 514 VYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC---------------------------------- 559 (708)
Q Consensus 514 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~---------------------------------- 559 (708)
||||++|.++. ... .+ ...++.++++.++.||+..
T Consensus 93 v~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp EEECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred EEEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 99999998884 211 11 2357778888888888752
Q ss_pred ---------------------CCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 560 ---------------------FPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 560 ---------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
.+.++|||++|.||+++.++.+.|+|||.+..
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01389999999999998776677999999863
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.03 E-value=4.9e-11 Score=123.62 Aligned_cols=83 Identities=19% Similarity=0.260 Sum_probs=43.5
Q ss_pred CCCCCeEeccCCcccccCCCCC---CccccceeecccCcccccCC----ChhhhhhcccchhhcccccCCCCCchhhcC-
Q 039322 216 LVDLEYLDLSANRFNNSVPENL---GNLLKLHYLGLSNNQFVLEL----PKELEKLVQLSELDASHNLFGGEIPFQICS- 287 (708)
Q Consensus 216 ~~~L~~L~l~~N~i~~~~~~~~---~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~- 287 (708)
+++|++|+|++|.+....+..+ ..+++|+.|+|+.|.|++.. +..+..+++|+.|+|++|.|++.....+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 4556666666555543221111 23566666666666665432 222345666777777777666443333332
Q ss_pred cccCCceeccccc
Q 039322 288 LKSLEKLNLSHNN 300 (708)
Q Consensus 288 ~~~L~~L~l~~N~ 300 (708)
+ ...+++++++
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 2 2456666665
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1.8e-09 Score=112.90 Aligned_cols=143 Identities=15% Similarity=0.269 Sum_probs=107.2
Q ss_pred ccceeccccCccEEEEEeCCCcEEEEEEcC--CCCCcchhHhHHHHHHHHHHHHhcc--CCceeeEEEEEeeC---CeeE
Q 039322 440 AQYCIGNGGHGSVYRAELPSGQVVAIKKFH--SPLPCDQIADQKEFLIEVKALTEIR--HRNIVKFYGFCSHA---RHSF 512 (708)
Q Consensus 440 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~l~~~~~~~---~~~~ 512 (708)
..+.++.|.++.||+.... +..+++|+.. ... .......+.+|.++++.+. +..++++++++.+. +..|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~---~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSK---LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCC---CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 3567899999999999875 4678899876 311 1122456788999999997 45688999998776 4589
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC--------------------------------- 559 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--------------------------------- 559 (708)
+||||++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 999999997775421 123678888999999999999999731
Q ss_pred ----------------------CCCeEEccCCCCCeeeCCCCc--EEEeecccccc
Q 039322 560 ----------------------FPPIVHQDISSKNLLLDLEYE--AHVADFGIAKF 591 (708)
Q Consensus 560 ----------------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~a~~ 591 (708)
.+.++|||+++.||+++.++. +.|+||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 146899999999999997753 68999999874
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.99 E-value=4.9e-11 Score=123.58 Aligned_cols=85 Identities=24% Similarity=0.268 Sum_probs=48.2
Q ss_pred ccccceeecccCcccccCCChhhh---hhcccchhhcccccCCCCCch----hhcCcccCCceecccccccCCCCCcccc
Q 039322 239 NLLKLHYLGLSNNQFVLELPKELE---KLVQLSELDASHNLFGGEIPF----QICSLKSLEKLNLSHNNLSGSIPNCFEG 311 (708)
Q Consensus 239 ~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~ls~N~i~~~~~~----~~~~~~~L~~L~l~~N~l~~~~~~~~~~ 311 (708)
.+++|+.|+|++|.++...+..+. .+++|+.|+|+.|.|++..+. .+..+++|+.|+|++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 356777777777777643333333 366777777777777653222 2234577777777777665332222222
Q ss_pred cccccEEecCCCc
Q 039322 312 IRGISVIDISDNQ 324 (708)
Q Consensus 312 l~~L~~l~l~~N~ 324 (708)
.- ...+++++|+
T Consensus 330 al-g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL-PMKIDVSDSQ 341 (362)
T ss_dssp HC-CSEEECCSBC
T ss_pred Hc-CCEEEecCCc
Confidence 00 2446777665
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.85 E-value=1.6e-09 Score=110.41 Aligned_cols=184 Identities=20% Similarity=0.206 Sum_probs=123.5
Q ss_pred cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CC--ceeeEEEEEeeCC---eeEEE
Q 039322 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HR--NIVKFYGFCSHAR---HSFLV 514 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~--~iv~l~~~~~~~~---~~~lv 514 (708)
.+.++.|....||+.. +.+++|+.... .....+.+|.++++.+. +. .+.++++.....+ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 3458999999999864 45889986531 34567889999998883 33 2456665554433 35899
Q ss_pred EEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 039322 515 YELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC----------------------------------- 559 (708)
Q Consensus 515 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~----------------------------------- 559 (708)
||+++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 95 m~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 99999988765321 23677788888889999888888621
Q ss_pred --------------------CCCeEEccCCCCCeeeCC--CCcEEEeecccccccCCCCCccccccccccc---cCcccc
Q 039322 560 --------------------FPPIVHQDISSKNLLLDL--EYEAHVADFGIAKFLKPESSNWTEFAGTYGY---VAPELA 614 (708)
Q Consensus 560 --------------------~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y---~aPE~~ 614 (708)
.+.++|+|+++.||+++. +..+.++||+.+....+.... .....+ ..|+..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl----~~~~~~~~~~~~~~~ 245 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF----ISLMEDDEEYGMEFV 245 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHH----HTTCCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHH----HHHHhhccccCHHHH
Confidence 135799999999999998 456789999998754321100 000011 122211
Q ss_pred cc-----CC---------CCcchhHHHHHHHHHHHHhCCCCCC
Q 039322 615 YT-----MK---------ITEKCDVYSFGVLVLEAIKGKHPRD 643 (708)
Q Consensus 615 ~~-----~~---------~~~~~DvwslG~~l~elltg~~p~~ 643 (708)
.. +. .....+.|++|.++|.+.+|..+|-
T Consensus 246 ~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 246 SKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 10 11 1123689999999999999998864
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.69 E-value=1.3e-07 Score=96.71 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=102.9
Q ss_pred cccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC----CceeeEEEEEeeCCeeE
Q 039322 437 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH----RNIVKFYGFCSHARHSF 512 (708)
Q Consensus 437 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~~iv~l~~~~~~~~~~~ 512 (708)
.+...+.++.|....||+. |+.+++|+... ......+.+|.++++.+.+ ..+++++++ +..+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~------~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR------DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc------HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 5556678999999999998 56788998643 1224568899999888865 235566665 5678
Q ss_pred EEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCC--------------------------------
Q 039322 513 LVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCF-------------------------------- 560 (708)
Q Consensus 513 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~-------------------------------- 560 (708)
+||||++|.++.+... ..++..+...++.++++.++.||+...
T Consensus 104 lvme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 104 NIMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EEEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 9999999988864321 225667777888888888888885422
Q ss_pred ----------------------------CCeEEccCCCCCeeeCCCCcEEEeecccccccC
Q 039322 561 ----------------------------PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLK 593 (708)
Q Consensus 561 ----------------------------~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 593 (708)
+.++|+|++|.||+++.+..+.|+||+.+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999986667999999987543
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.52 E-value=6.4e-09 Score=97.13 Aligned_cols=41 Identities=22% Similarity=0.148 Sum_probs=17.8
Q ss_pred CcCCCCCcEEEccCC-ccccc----cccccCCCCCCCEEEcccCcc
Q 039322 93 LRNCSSLIRVRLNSN-NLTGN----ISEALGIYPNLTFIDLSRNDF 133 (708)
Q Consensus 93 ~~~l~~L~~L~l~~n-~i~~~----~~~~~~~~~~L~~L~l~~n~l 133 (708)
+...++|++|+|++| .|+.. ....+...++|++|+|++|+|
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i 77 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRS 77 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCC
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCC
Confidence 334445555555554 44421 122333344444444444444
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=1.1e-08 Score=95.58 Aligned_cols=117 Identities=9% Similarity=0.101 Sum_probs=77.2
Q ss_pred CccccCCCCccEEeccCC-ccccc----cCccCcCCCCCcEEEccCCccccc----cccccCCCCCCCEEEcccCcceee
Q 039322 66 PHNVCRGGALQYFGVSEN-HFQGT----IPKILRNCSSLIRVRLNSNNLTGN----ISEALGIYPNLTFIDLSRNDFYGE 136 (708)
Q Consensus 66 ~~~~~~l~~L~~L~l~~n-~i~~~----~~~~~~~l~~L~~L~l~~n~i~~~----~~~~~~~~~~L~~L~l~~n~l~~~ 136 (708)
...+...++|++|+|++| .|++. +...+...++|++|+|++|.|+.. ....+...++|++|+|++|.|+..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345566789999999999 88753 334566678999999999999843 234455567788888888887643
Q ss_pred C----CCCCCCCCCCCEEEc--ccCcccccC----CccccCCCCCCEEeccccccc
Q 039322 137 I----SSNWGKCPKLGTLNV--SMNNITGGI----PREIGNSSQLQALDLSLNHIV 182 (708)
Q Consensus 137 ~----~~~~~~l~~L~~L~L--~~N~i~~~~----~~~~~~l~~L~~L~L~~n~l~ 182 (708)
. ...+...++|++|+| ++|.|+... ...+...++|++|+|++|.+.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2 334455566777777 667766332 223334456666666666554
No 417
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.46 E-value=9.1e-07 Score=88.18 Aligned_cols=135 Identities=17% Similarity=0.159 Sum_probs=99.5
Q ss_pred eeccccCc-cEEEEEeC-CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeEEEEEecc
Q 039322 443 CIGNGGHG-SVYRAELP-SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 443 ~ig~G~~g-~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
.+..|..| .||+.... ++..+++|.-.. .....+.+|...++.+. +-.+.++++++.+++..++|||+++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 35556665 58988654 466799998653 23456888999998884 4457889999999999999999999
Q ss_pred CCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 039322 520 RGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDC---------------------------------------- 559 (708)
Q Consensus 520 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~---------------------------------------- 559 (708)
|.++.+...... .....++.+++..++.||...
T Consensus 104 G~~~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 104 GKTAFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp SEEHHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred CccccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 988877653221 233456667777777777521
Q ss_pred ---------------CCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 560 ---------------FPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 560 ---------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
.+.++|||+.+.||+++.++.+-|+||+.+..
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999877778999998864
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.33 E-value=3.4e-06 Score=85.48 Aligned_cols=137 Identities=18% Similarity=0.162 Sum_probs=95.4
Q ss_pred cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCC---ceeeEEEEEe-eCCeeEEEEE
Q 039322 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR---NIVKFYGFCS-HARHSFLVYE 516 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~l~~~~~-~~~~~~lv~e 516 (708)
.+.++.|....||+. |+.+++|+... ......+..|.++++.+.+. .+.+++.+.. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 345788888899988 56688898532 13356788999999999642 4677777774 4456789999
Q ss_pred eccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 039322 517 LLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHD-------------------------------------- 558 (708)
Q Consensus 517 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-------------------------------------- 558 (708)
|++|.++.+..- ..++..+...++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 999988765321 1134445555555555555555542
Q ss_pred -------------------CCCCeEEccCCCCCeeeCC---CCc-EEEeeccccccc
Q 039322 559 -------------------CFPPIVHQDISSKNLLLDL---EYE-AHVADFGIAKFL 592 (708)
Q Consensus 559 -------------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfg~a~~~ 592 (708)
..+.++|+|+++.||+++. ++. +.|+||+.+...
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1235699999999999987 455 489999988754
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.32 E-value=4.5e-08 Score=95.97 Aligned_cols=30 Identities=30% Similarity=0.296 Sum_probs=14.8
Q ss_pred cceeecccCcccccCCC-------hhhhhhcccchhh
Q 039322 242 KLHYLGLSNNQFVLELP-------KELEKLVQLSELD 271 (708)
Q Consensus 242 ~L~~L~l~~n~l~~~~~-------~~~~~l~~L~~L~ 271 (708)
+|+.|+|++|.+.+..| ..+..+++|+.||
T Consensus 221 ~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 221 KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 45555555555543332 1245555666554
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.31 E-value=2.2e-06 Score=85.89 Aligned_cols=78 Identities=19% Similarity=0.187 Sum_probs=60.7
Q ss_pred ccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCC---ceeeEEEEEeeCCeeEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR---NIVKFYGFCSHARHSFLV 514 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~l~~~~~~~~~~~lv 514 (708)
....+.||.|.++.||++...+|+.+++|+..... ......|..|++.++.+++. .+++++++. ..++|
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~----~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lv 88 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLA 88 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEE
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCCC----cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEE
Confidence 34456799999999999988889999999965321 11235688999999999764 588888764 36899
Q ss_pred EEeccCCCH
Q 039322 515 YELLERGSL 523 (708)
Q Consensus 515 ~e~~~~g~L 523 (708)
|||++++++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999999874
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.31 E-value=2.3e-06 Score=88.89 Aligned_cols=145 Identities=13% Similarity=0.209 Sum_probs=91.5
Q ss_pred ccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCC--ceeeEEEEEeeC-CeeEEE
Q 039322 438 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHR--NIVKFYGFCSHA-RHSFLV 514 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--~iv~l~~~~~~~-~~~~lv 514 (708)
....+.++.|....+|+... +|+.+++|..... ..+..|..+++.+... .+.++++++... +..|+|
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA---------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC---------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch---------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 34456788999999999976 5788999987541 2477888898888643 367778777654 568999
Q ss_pred EEeccCCCHHHH------------------hcccccc--------------cCCCHHHHH--------------------
Q 039322 515 YELLERGSLAAI------------------LSSDTAA--------------QELGWSQRM-------------------- 542 (708)
Q Consensus 515 ~e~~~~g~L~~~------------------l~~~~~~--------------~~l~~~~~~-------------------- 542 (708)
|||++|.++.+. ++..... ..-.|...+
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998655321 0110000 000111110
Q ss_pred -HHHHHHHHHHHHHHhCC-CCCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 543 -NVIKGVADALSYLHHDC-FPPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 543 -~i~~~i~~~l~~Lh~~~-~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
.....+....+++.... .+.++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 11111222222332211 146899999999999987777889999998754
No 422
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.29 E-value=3.6e-08 Score=96.62 Aligned_cols=80 Identities=29% Similarity=0.310 Sum_probs=48.9
Q ss_pred CCCCCCCEEEcccCcceeeC--CCCCCCCCCCCEEEcccCcccccCCccccCCC--CCCEEecccccccccCCc------
Q 039322 118 GIYPNLTFIDLSRNDFYGEI--SSNWGKCPKLGTLNVSMNNITGGIPREIGNSS--QLQALDLSLNHIVGEIPK------ 187 (708)
Q Consensus 118 ~~~~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~------ 187 (708)
.++++|++|+|++|+|+++. +..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+..|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 45667777777777776533 23445667777777777777644 2233333 677777777777654431
Q ss_pred -ccCCCCCCCEEE
Q 039322 188 -ELGKLNSLTELI 199 (708)
Q Consensus 188 -~~~~l~~L~~L~ 199 (708)
.+..+|+|+.|+
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 345667777765
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.19 E-value=3.9e-07 Score=82.64 Aligned_cols=84 Identities=10% Similarity=0.014 Sum_probs=52.5
Q ss_pred CCccEEeccCCccccccCccCcCCCCCcEEEccCCc-cccccccccCCC----CCCCEEEcccC-cceeeCCCCCCCCCC
Q 039322 73 GALQYFGVSENHFQGTIPKILRNCSSLIRVRLNSNN-LTGNISEALGIY----PNLTFIDLSRN-DFYGEISSNWGKCPK 146 (708)
Q Consensus 73 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~~~~~----~~L~~L~l~~n-~l~~~~~~~~~~l~~ 146 (708)
-.|+.||++++.|++..-..+..+++|++|+|++|. |+......+..+ ++|++|+|++| +|+...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467777777777776666666777777777777773 665444445543 35666666665 355444444555666
Q ss_pred CCEEEcccCc
Q 039322 147 LGTLNVSMNN 156 (708)
Q Consensus 147 L~~L~L~~N~ 156 (708)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666666653
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.10 E-value=4.2e-06 Score=86.99 Aligned_cols=84 Identities=5% Similarity=-0.013 Sum_probs=56.0
Q ss_pred ccee-ccccCccEEEEEeC-------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-C--CceeeEEEEEeeC-
Q 039322 441 QYCI-GNGGHGSVYRAELP-------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-H--RNIVKFYGFCSHA- 508 (708)
Q Consensus 441 ~~~i-g~G~~g~vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~~iv~l~~~~~~~- 508 (708)
.+.| +.|....+|+.... +++.+++|........ .......+..|..+++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~-~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDV-PVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGC-CSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcc-ccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 3567 88888999998654 2678999986542100 0001134667888888884 3 3578888887665
Q ss_pred --CeeEEEEEeccCCCHHH
Q 039322 509 --RHSFLVYELLERGSLAA 525 (708)
Q Consensus 509 --~~~~lv~e~~~~g~L~~ 525 (708)
+..++||||++|..+.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 35689999999876543
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.10 E-value=5.9e-07 Score=81.48 Aligned_cols=84 Identities=12% Similarity=0.082 Sum_probs=51.1
Q ss_pred CCCCeEeccCCcccccCCCCCCccccceeecccCcc-cccCCChhhhhh----cccchhhccccc-CCCCCchhhcCccc
Q 039322 217 VDLEYLDLSANRFNNSVPENLGNLLKLHYLGLSNNQ-FVLELPKELEKL----VQLSELDASHNL-FGGEIPFQICSLKS 290 (708)
Q Consensus 217 ~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l----~~L~~L~ls~N~-i~~~~~~~~~~~~~ 290 (708)
.+|++||++++.|+......+.++++|+.|+|++|. |++.....+..+ ++|++|+|++|. |++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356666666666665555555666677777777764 554333344442 357777777764 66555555666677
Q ss_pred CCceeccccc
Q 039322 291 LEKLNLSHNN 300 (708)
Q Consensus 291 L~~L~l~~N~ 300 (708)
|++|++++++
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777764
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.94 E-value=2.7e-05 Score=82.18 Aligned_cols=79 Identities=16% Similarity=0.077 Sum_probs=50.2
Q ss_pred cceeccccCccEEEEEeC-CCcEEEEEEcCCCCC-cch--hHhHHHHHHHHHHHHhccC--C-ceeeEEEEEeeCCeeEE
Q 039322 441 QYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLP-CDQ--IADQKEFLIEVKALTEIRH--R-NIVKFYGFCSHARHSFL 513 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~--~~~~~~~~~e~~~l~~l~h--~-~iv~l~~~~~~~~~~~l 513 (708)
.+.+|.|..+.||++... +++.++||....... ... ......+..|.++++.+.. + .+++++.+ +++..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999654 467899998754221 000 0123456778888887742 3 45566654 3455689
Q ss_pred EEEeccCC
Q 039322 514 VYELLERG 521 (708)
Q Consensus 514 v~e~~~~g 521 (708)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89 E-value=3.9e-05 Score=79.06 Aligned_cols=141 Identities=22% Similarity=0.335 Sum_probs=80.2
Q ss_pred ceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC--CceeeEEE------EEeeCCeeEE
Q 039322 442 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH--RNIVKFYG------FCSHARHSFL 513 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~l~~------~~~~~~~~~l 513 (708)
+.|+.|..+.||+....+| .+++|..... ...+..|.++++.+.. -.+++++. +....+..++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~--------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP--------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV 108 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC--------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC--------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence 3466677889999987655 5899998741 1233345555555531 13344443 1234667899
Q ss_pred EEEeccCCCHH--------------HHhccccc----c-------cCCCHHHH---------------------------
Q 039322 514 VYELLERGSLA--------------AILSSDTA----A-------QELGWSQR--------------------------- 541 (708)
Q Consensus 514 v~e~~~~g~L~--------------~~l~~~~~----~-------~~l~~~~~--------------------------- 541 (708)
+|||++|.++. ..++.... . ....|...
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 99999986542 11111100 0 00123211
Q ss_pred ----HHHHHHHHHHHHHHHh----------CCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 542 ----MNVIKGVADALSYLHH----------DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 542 ----~~i~~~i~~~l~~Lh~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
..+..++..++++|++ ...+.++|||+++.||+++.++.+.|+||+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1111223445666653 0124899999999999998888999999998863
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.86 E-value=7.4e-05 Score=75.32 Aligned_cols=138 Identities=17% Similarity=0.190 Sum_probs=92.3
Q ss_pred cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc---CCceeeEEEEEeeCCeeEEEEEe
Q 039322 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR---HRNIVKFYGFCSHARHSFLVYEL 517 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~l~~~~~~~~~~~lv~e~ 517 (708)
.+.|+.|....+|+... ++..+++|.... .....+..|.+.++.+. ...+++++++...++..++||||
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~-------~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~ 112 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINER-------SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA 112 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEG-------GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCc-------ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence 45689999999999987 467889998653 13567888999988884 36788999998888899999999
Q ss_pred ccCCCHH--------H---Hhccccc--c-----------------cCCCHHHHH---HHHH----------------HH
Q 039322 518 LERGSLA--------A---ILSSDTA--A-----------------QELGWSQRM---NVIK----------------GV 548 (708)
Q Consensus 518 ~~~g~L~--------~---~l~~~~~--~-----------------~~l~~~~~~---~i~~----------------~i 548 (708)
+++..+. + .++.... . -.-+|.... ++.. .+
T Consensus 113 l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l 192 (312)
T 3jr1_A 113 LNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLI 192 (312)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHH
T ss_pred ccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence 9997542 1 1222111 0 012454322 1111 11
Q ss_pred HHH-HHHHHh-CCCCCeEEccCCCCCeeeCCCCcEEEeecc
Q 039322 549 ADA-LSYLHH-DCFPPIVHQDISSKNLLLDLEYEAHVADFG 587 (708)
Q Consensus 549 ~~~-l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 587 (708)
+.. ...|.. ...+.++|+|+.+.|++++.++ +.|.|++
T Consensus 193 ~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 193 VQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 223432 2235899999999999999887 8899974
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.69 E-value=7e-06 Score=75.88 Aligned_cols=63 Identities=21% Similarity=0.210 Sum_probs=26.4
Q ss_pred CCCCcEEEccCC-cccc----ccccccCCCCCCCEEEcccCcceeeCCCCCC----CCCCCCEEEcccCccc
Q 039322 96 CSSLIRVRLNSN-NLTG----NISEALGIYPNLTFIDLSRNDFYGEISSNWG----KCPKLGTLNVSMNNIT 158 (708)
Q Consensus 96 l~~L~~L~l~~n-~i~~----~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~----~l~~L~~L~L~~N~i~ 158 (708)
-+.|++|+|++| +|.. ....++.....|++|+|++|+|.......+. .-+.|++|+|++|.|+
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 344445555443 4431 1223334444455555555554433332222 2234444444444444
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.59 E-value=0.00038 Score=73.79 Aligned_cols=76 Identities=11% Similarity=0.093 Sum_probs=45.9
Q ss_pred CCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCccccccc--cccccCccccccC---CCCcchhHHHHHHHHHHH
Q 039322 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTEFAG--TYGYVAPELAYTM---KITEKCDVYSFGVLVLEA 635 (708)
Q Consensus 561 ~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~--~~~y~aPE~~~~~---~~~~~~DvwslG~~l~el 635 (708)
+.++|||+++.||+++.++ ++++||+.+....+.-. ...... ...|.+|+..... ......++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 4899999999999998776 99999999875332111 111111 1345666554321 111234455677777777
Q ss_pred HhC
Q 039322 636 IKG 638 (708)
Q Consensus 636 ltg 638 (708)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.53 E-value=1.7e-05 Score=73.26 Aligned_cols=115 Identities=10% Similarity=0.104 Sum_probs=77.7
Q ss_pred cccCCCCccEEeccCC-ccccc----cCccCcCCCCCcEEEccCCcccccc----ccccCCCCCCCEEEcccCcceeeCC
Q 039322 68 NVCRGGALQYFGVSEN-HFQGT----IPKILRNCSSLIRVRLNSNNLTGNI----SEALGIYPNLTFIDLSRNDFYGEIS 138 (708)
Q Consensus 68 ~~~~l~~L~~L~l~~n-~i~~~----~~~~~~~l~~L~~L~l~~n~i~~~~----~~~~~~~~~L~~L~l~~n~l~~~~~ 138 (708)
.+...+.|++|+|++| +|.+. +...+..-+.|++|+|++|.|+... ..++...+.|++|+|++|.|+....
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455678999999985 77642 3345666788999999999998443 3445567889999999999965433
Q ss_pred C----CCCCCCCCCEEEcccC---ccccc----CCccccCCCCCCEEeccccccc
Q 039322 139 S----NWGKCPKLGTLNVSMN---NITGG----IPREIGNSSQLQALDLSLNHIV 182 (708)
Q Consensus 139 ~----~~~~l~~L~~L~L~~N---~i~~~----~~~~~~~l~~L~~L~L~~n~l~ 182 (708)
. ++..-+.|++|+|++| .+... +...+..-++|+.|+++.|.+.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 2 3445567888888765 33321 2334455567777777766553
No 432
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.51 E-value=0.00029 Score=70.53 Aligned_cols=80 Identities=20% Similarity=0.233 Sum_probs=57.8
Q ss_pred ccccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-C--CceeeEEEEEeeCCeeE
Q 039322 436 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-H--RNIVKFYGFCSHARHSF 512 (708)
Q Consensus 436 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~~iv~l~~~~~~~~~~~ 512 (708)
.+......+|.|..+.||+.+..+|+.|++|+...... .....|..|.+.|+.+. . -.+++++++. ..+
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~----~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~ 86 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRT 86 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc----chhhHHHHHHHHHHHHHhhCCCCcceEEecc----Cce
Confidence 35666778999999999999999999999998654221 12345778999988884 2 2455666542 247
Q ss_pred EEEEeccCCCH
Q 039322 513 LVYELLERGSL 523 (708)
Q Consensus 513 lv~e~~~~g~L 523 (708)
+||||++++..
T Consensus 87 lv~e~l~~~~~ 97 (288)
T 3f7w_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEeecccCC
Confidence 89999988643
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.33 E-value=0.00065 Score=69.52 Aligned_cols=141 Identities=18% Similarity=0.151 Sum_probs=73.9
Q ss_pred eeccccCcc-EEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccC--CceeeEEEEEeeCCeeEEEEEecc
Q 039322 443 CIGNGGHGS-VYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRH--RNIVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 443 ~ig~G~~g~-vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
.++.|.... +|+....+|+.+++|...... ...+..|+.+++.+.. -.+.+++.+....+ +++||++.
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~-------~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~ 95 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE-------GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLG 95 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT-------TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCC
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC-------CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCC
Confidence 455555444 677776446778888754321 0223446666666642 23566777643333 78999997
Q ss_pred CCCHHHHhccccc-----------------------ccCCCHHHHH-------H-H------------HHHHHHHHHHHH
Q 039322 520 RGSLAAILSSDTA-----------------------AQELGWSQRM-------N-V------------IKGVADALSYLH 556 (708)
Q Consensus 520 ~g~L~~~l~~~~~-----------------------~~~l~~~~~~-------~-i------------~~~i~~~l~~Lh 556 (708)
+.++.+++..... ...++..... . + ...+...++.+.
T Consensus 96 ~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~ 175 (333)
T 3csv_A 96 DALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQIL 175 (333)
T ss_dssp SCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 7666554432110 0111111110 0 0 001111222221
Q ss_pred h---CCCCCeEEccCCCCCeeeCCC----CcEEEeeccccccc
Q 039322 557 H---DCFPPIVHQDISSKNLLLDLE----YEAHVADFGIAKFL 592 (708)
Q Consensus 557 ~---~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~a~~~ 592 (708)
+ ...+.++|||+.+.||+++.+ +.+.|+||+.+...
T Consensus 176 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 176 SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred HhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1 122478999999999999875 67999999998754
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.22 E-value=0.00076 Score=67.90 Aligned_cols=71 Identities=11% Similarity=-0.000 Sum_probs=44.0
Q ss_pred cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCce-eeEEEEEeeCCeeEEEEEec-
Q 039322 441 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNI-VKFYGFCSHARHSFLVYELL- 518 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~l~~~~~~~~~~~lv~e~~- 518 (708)
.+.|+.|....+|+. +.+++|+....... ......|..+++.+...++ .++++++ ++.-++++||+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-----~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~ 90 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-----YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIA 90 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC---------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-----eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecC
Confidence 677889999999998 45889987642111 1112457777777743222 4666543 33457899999
Q ss_pred cCCCH
Q 039322 519 ERGSL 523 (708)
Q Consensus 519 ~~g~L 523 (708)
++.++
T Consensus 91 ~g~~l 95 (301)
T 3dxq_A 91 GAQTM 95 (301)
T ss_dssp TCEEC
T ss_pred CCccC
Confidence 55443
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.12 E-value=0.0029 Score=64.37 Aligned_cols=157 Identities=13% Similarity=0.151 Sum_probs=87.6
Q ss_pred hHHHHHHHhccccc-----cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc--ee
Q 039322 427 VYDEIVRATNDFDA-----QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--IV 499 (708)
Q Consensus 427 ~~~~~~~~~~~~~~-----~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~--iv 499 (708)
+.+.+......|.+ ...++ |....||+....+|+.+++|...... .....+..|..+++.+.... ++
T Consensus 12 ~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-----~~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 12 HPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-----WTADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-----CCHHHHHHHHHHHHHHHHcCCeec
Confidence 34444444444432 23466 88889999987778789999986421 12345667888877774222 34
Q ss_pred eEEEE-----EeeCCeeEEEEEeccCCCHH-----H------H---hccc----cc--ccCCCHHHH----HHH------
Q 039322 500 KFYGF-----CSHARHSFLVYELLERGSLA-----A------I---LSSD----TA--AQELGWSQR----MNV------ 544 (708)
Q Consensus 500 ~l~~~-----~~~~~~~~lv~e~~~~g~L~-----~------~---l~~~----~~--~~~l~~~~~----~~i------ 544 (708)
+++.. ....+..+++|||++|..+. . . ++.. .. ....++... ..+
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL 165 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence 44443 22345668899999885431 1 1 1110 00 011222211 001
Q ss_pred ---------HHHHHHHHHHHHhC----CCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 545 ---------IKGVADALSYLHHD----CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 545 ---------~~~i~~~l~~Lh~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
...+...++.+.+. ..+.++|||+++.||+++ + .+.++||+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 223678999999999999 4 899999998764
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.07 E-value=0.0032 Score=63.86 Aligned_cols=159 Identities=13% Similarity=0.170 Sum_probs=87.5
Q ss_pred chHHHHHHHhccccc-----cceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc--e
Q 039322 426 LVYDEIVRATNDFDA-----QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN--I 498 (708)
Q Consensus 426 ~~~~~~~~~~~~~~~-----~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~--i 498 (708)
++.+++......|.. .+.|+.|....+|+....+| .+++|...... ....+..|..+++.+...+ +
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~v 79 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSC 79 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCC
Confidence 344555555555654 23467788889999987655 68899886521 1223456777777664222 3
Q ss_pred eeEEEE------EeeCCeeEEEEEeccCCCHHH--------------Hhcccc----cc--cCC---CHHHHHH------
Q 039322 499 VKFYGF------CSHARHSFLVYELLERGSLAA--------------ILSSDT----AA--QEL---GWSQRMN------ 543 (708)
Q Consensus 499 v~l~~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~~~----~~--~~l---~~~~~~~------ 543 (708)
.+++.. ....+..+++++|++|..+.. .++... .. ... .|.....
T Consensus 80 P~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 159 (322)
T 2ppq_A 80 PLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERA 159 (322)
T ss_dssp CCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGG
T ss_pred CcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHH
Confidence 333321 123456789999999864311 011110 00 001 1222110
Q ss_pred ------HHHHHHHHHHHHHhC----CCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 544 ------VIKGVADALSYLHHD----CFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 544 ------i~~~i~~~l~~Lh~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
+...+...++++++. ..++++|+|+.+.||+++.++.+.++||+.+..
T Consensus 160 ~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 160 DEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 001134445555532 124789999999999998776668999998763
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.04 E-value=0.0004 Score=59.89 Aligned_cols=42 Identities=17% Similarity=0.267 Sum_probs=28.5
Q ss_pred ccCCceecccccccCCCCCcccccccccEEecCCCcCCCCCC
Q 039322 289 KSLEKLNLSHNNLSGSIPNCFEGIRGISVIDISDNQLQGPVP 330 (708)
Q Consensus 289 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 330 (708)
++|+.|+|++|+|+.+.+..|..+++|+.|+|++|++.+...
T Consensus 31 ~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 31 VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 356677777777776666667777777777777777766543
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.97 E-value=0.0011 Score=57.17 Aligned_cols=55 Identities=20% Similarity=0.287 Sum_probs=26.1
Q ss_pred EEeccCCccc-cccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCcc
Q 039322 77 YFGVSENHFQ-GTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRNDF 133 (708)
Q Consensus 77 ~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l 133 (708)
.++.+++.++ ..+|..+. ++|++|+|++|+|+.+..+.|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 22333222 2455555555555555555555555555555544443
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.91 E-value=0.0039 Score=57.79 Aligned_cols=102 Identities=22% Similarity=0.167 Sum_probs=66.0
Q ss_pred CHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 039322 522 SLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKFLKPESSNWTE 601 (708)
Q Consensus 522 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 601 (708)
+|.+.|...+ .+++++++|.++.|.+.+|.-.-.... . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 7999997655 569999999999999999887622110 1 1223456889999999988764 1110
Q ss_pred ccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 039322 602 FAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHP 641 (708)
Q Consensus 602 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p 641 (708)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123467888753 3456788899999999998854443
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.91 E-value=0.0012 Score=70.06 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=49.0
Q ss_pred cceeccccCccEEEEEeCC--------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc-eeeEEEEEeeCCee
Q 039322 441 QYCIGNGGHGSVYRAELPS--------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN-IVKFYGFCSHARHS 511 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~l~~~~~~~~~~ 511 (708)
.+.|+.|....+|+....+ ++.+++|+.... .. .+.+..|..+++.+...+ .+++++.+..
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~---- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ET--ESHLVAESVIFTLLSERHLGPKLYGIFSG---- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----Cc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----
Confidence 3467888889999997653 578999998431 11 134557888888885333 3677776543
Q ss_pred EEEEEeccCCC
Q 039322 512 FLVYELLERGS 522 (708)
Q Consensus 512 ~lv~e~~~~g~ 522 (708)
.+|+||++|.+
T Consensus 148 g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 GRLEEYIPSRP 158 (429)
T ss_dssp EEEECCCCEEE
T ss_pred CEEEEEeCCcc
Confidence 38999998643
No 441
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.82 E-value=0.0036 Score=64.72 Aligned_cols=141 Identities=16% Similarity=0.254 Sum_probs=83.8
Q ss_pred ceeccccCccEEEEEeC--------CCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCeeE
Q 039322 442 YCIGNGGHGSVYRAELP--------SGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHSF 512 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~ 512 (708)
+.+..|....+|+.... +++.|++|+.... ......+.+|.++++.+. +.-..++++.+.+ .
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-----~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g 126 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-----LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----G 126 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----E
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-----cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----c
Confidence 45777888899999764 2578999986331 123455668999988885 3334667776654 2
Q ss_pred EEEEeccCCCHHHH-----------------hcccc--cccCCC--HHHHHHHHHHHHH-------------------HH
Q 039322 513 LVYELLERGSLAAI-----------------LSSDT--AAQELG--WSQRMNVIKGVAD-------------------AL 552 (708)
Q Consensus 513 lv~e~~~~g~L~~~-----------------l~~~~--~~~~l~--~~~~~~i~~~i~~-------------------~l 552 (708)
+||||++|.++..- ++... ..+... +.++.++..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 89999998654310 11111 111222 4555556554422 12
Q ss_pred HH----HHhC-CCCCeEEccCCCCCeeeCCC----CcEEEeecccccc
Q 039322 553 SY----LHHD-CFPPIVHQDISSKNLLLDLE----YEAHVADFGIAKF 591 (708)
Q Consensus 553 ~~----Lh~~-~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~a~~ 591 (708)
.. |... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 22 2221 12367899999999999876 7899999998863
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.66 E-value=0.0093 Score=63.39 Aligned_cols=73 Identities=18% Similarity=0.129 Sum_probs=46.5
Q ss_pred ceeccccCccEEEEEeCC-CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc-eeeEEEEEeeCCeeEEEEEecc
Q 039322 442 YCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN-IVKFYGFCSHARHSFLVYELLE 519 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~l~~~~~~~~~~~lv~e~~~ 519 (708)
+.|+.|-...+|+....+ +..+++|+...... ... ....|..+++.+...+ .+++++.+. + .+|+||++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~--~~i---dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTD--EII---NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CC--SCS---CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChh--hhc---CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 467888889999998764 47899998754211 111 1146888888886433 367777763 2 35999998
Q ss_pred CCCH
Q 039322 520 RGSL 523 (708)
Q Consensus 520 ~g~L 523 (708)
|.++
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7443
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.52 E-value=0.008 Score=61.42 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=28.1
Q ss_pred CCeEEccCCCCCeeeCCCCcEEEeeccccccc
Q 039322 561 PPIVHQDISSKNLLLDLEYEAHVADFGIAKFL 592 (708)
Q Consensus 561 ~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 592 (708)
+.++|+|+.+.||+++.++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47899999999999998888999999887643
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.50 E-value=0.0037 Score=64.89 Aligned_cols=72 Identities=10% Similarity=0.069 Sum_probs=43.4
Q ss_pred ceeccccCccEEEEEeCC---------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCc-eeeEEEEEeeCCee
Q 039322 442 YCIGNGGHGSVYRAELPS---------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRN-IVKFYGFCSHARHS 511 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~l~~~~~~~~~~ 511 (708)
..++.|....+|+....+ ++.+++|+..... ........|.++++.+...+ .+++++.+ + -
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-----~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~ 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-----DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--G 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-----GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--T
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-----cceecHHHHHHHHHHHHhcCCCCceEEec--C--C
Confidence 457788888999997653 2689999875421 11112356788888775333 45666554 2 2
Q ss_pred EEEEEeccCCC
Q 039322 512 FLVYELLERGS 522 (708)
Q Consensus 512 ~lv~e~~~~g~ 522 (708)
++||||++|.+
T Consensus 110 ~~v~e~i~G~~ 120 (369)
T 3c5i_A 110 GRIEEWLYGDP 120 (369)
T ss_dssp EEEEECCCSEE
T ss_pred cEEEEEecCCc
Confidence 68999998754
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.94 E-value=0.019 Score=59.59 Aligned_cols=146 Identities=17% Similarity=0.244 Sum_probs=83.3
Q ss_pred ceeccccCccEEEEEeCC--------CcEEEEEEcCCCCCc-------chhHhH-------HHHHHHHHHHHhcc-CCce
Q 039322 442 YCIGNGGHGSVYRAELPS--------GQVVAIKKFHSPLPC-------DQIADQ-------KEFLIEVKALTEIR-HRNI 498 (708)
Q Consensus 442 ~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~-------~~~~~~-------~~~~~e~~~l~~l~-h~~i 498 (708)
+.|..|-...+|+...++ ++.|++++.-..... ...-++ +....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346667778899987754 367899987542110 000111 22345888888885 4446
Q ss_pred eeEEEEEeeCCeeEEEEEeccCCCHHH--H---------------hcccc--cccCCC--HHHHHHHHHHHH--------
Q 039322 499 VKFYGFCSHARHSFLVYELLERGSLAA--I---------------LSSDT--AAQELG--WSQRMNVIKGVA-------- 549 (708)
Q Consensus 499 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~--~~~~l~--~~~~~~i~~~i~-------- 549 (708)
.++++++..+ +|+||++|-+|.. + ++... ...... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6777776532 8999999754421 1 01110 111222 334444443332
Q ss_pred --------------HHH----HHHHhC-CCCCeEEccCCCCCeeeCCC------CcEEEeecccccc
Q 039322 550 --------------DAL----SYLHHD-CFPPIVHQDISSKNLLLDLE------YEAHVADFGIAKF 591 (708)
Q Consensus 550 --------------~~l----~~Lh~~-~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg~a~~ 591 (708)
.-+ +++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 12357899999999999877 7899999998863
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.58 E-value=0.17 Score=52.91 Aligned_cols=141 Identities=10% Similarity=0.105 Sum_probs=82.8
Q ss_pred cceeccccCccEEEEEeCC--------CcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhcc-CCceeeEEEEEeeCCee
Q 039322 441 QYCIGNGGHGSVYRAELPS--------GQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIR-HRNIVKFYGFCSHARHS 511 (708)
Q Consensus 441 ~~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~ 511 (708)
.+.+..|-...+|+....+ ++.+++|+...... ......+|.++++.+. +.-..++++.+. -
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-----~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~ 145 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-----KFYDSKVELDVFRYLSNINIAPNIIADFP----E 145 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC------CCCCHHHHHHHHHHHHHTTSSCCEEEEET----T
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-----hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----C
Confidence 3457778888999997753 57899999654211 1112345777777774 333456665432 2
Q ss_pred EEEEEeccCCCHHH--------------H---hccccc---------ccC-CCHHHHHHHHHHHH---------------
Q 039322 512 FLVYELLERGSLAA--------------I---LSSDTA---------AQE-LGWSQRMNVIKGVA--------------- 549 (708)
Q Consensus 512 ~lv~e~~~~g~L~~--------------~---l~~~~~---------~~~-l~~~~~~~i~~~i~--------------- 549 (708)
++|+||++|.++.. . ++.... ... ..+.++.++..++-
T Consensus 146 ~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 225 (424)
T 3mes_A 146 GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELY 225 (424)
T ss_dssp EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHH
T ss_pred CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccH
Confidence 68999999865321 0 011000 111 12445444443322
Q ss_pred ----HHHHHHHh---------------------CCCCCeEEccCCCCCeeeCCCCcEEEeecccccc
Q 039322 550 ----DALSYLHH---------------------DCFPPIVHQDISSKNLLLDLEYEAHVADFGIAKF 591 (708)
Q Consensus 550 ----~~l~~Lh~---------------------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 591 (708)
..+.+|.+ .....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 226 ~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 226 SKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 12233221 11135789999999999 7788999999998864
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=92.00 E-value=0.14 Score=33.62 Aligned_cols=27 Identities=30% Similarity=0.571 Sum_probs=12.6
Q ss_pred eeehhhHHHH-HHHHHHHHH-HHhhhcCC
Q 039322 375 AIVFPVLGAL-FLSMALIAI-FILRKRKS 401 (708)
Q Consensus 375 ~i~~~~~~~~-~~~~~~~~~-~~~r~R~~ 401 (708)
+|+.+|+|.+ +++++++++ +++|+|+.
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 4666666644 333333333 34444433
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=91.80 E-value=0.085 Score=34.54 Aligned_cols=26 Identities=19% Similarity=0.468 Sum_probs=12.8
Q ss_pred eeehhhHHHHHHHHHHHH-HHHhhhcC
Q 039322 375 AIVFPVLGALFLSMALIA-IFILRKRK 400 (708)
Q Consensus 375 ~i~~~~~~~~~~~~~~~~-~~~~r~R~ 400 (708)
.++.+++|+++++++++. ++++|||+
T Consensus 13 ~Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 13 SIISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHhheehhh
Confidence 456666665544444333 33444443
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.59 E-value=0.35 Score=50.38 Aligned_cols=29 Identities=24% Similarity=0.445 Sum_probs=24.7
Q ss_pred eEEccCCCCCeee------CCCCcEEEeecccccc
Q 039322 563 IVHQDISSKNLLL------DLEYEAHVADFGIAKF 591 (708)
Q Consensus 563 ivH~dlk~~Nill------~~~~~~kl~Dfg~a~~ 591 (708)
++|+|+.+.||++ +++..+.++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4567799999998863
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=91.25 E-value=0.61 Score=43.17 Aligned_cols=117 Identities=9% Similarity=0.112 Sum_probs=81.7
Q ss_pred cCCceeeEEEEEeeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCe
Q 039322 494 RHRNIVKFYGFCSHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHQDISSKNL 573 (708)
Q Consensus 494 ~h~~iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Ni 573 (708)
.||+++.. .+-..++...+.++.-+ +..+|-. -+..+...+++++.+|+....+++.. +|--++|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 58888876 45566666555555443 2332221 23478899999999999998777766 8999999999
Q ss_pred eeCCCCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 039322 574 LLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRDF 644 (708)
Q Consensus 574 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~ 644 (708)
+++.++.+++.-.|+-..+. |. ..+...=.-.+=+++..+++++..|+.
T Consensus 111 ~f~~~~~p~i~~RGik~~l~-----------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVD-----------------PL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EECTTSCEEESCCEETTTBS-----------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEcCCCCEEEEEccCccCCC-----------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999998777654332 21 112222344567788899999999863
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=90.40 E-value=0.21 Score=32.73 Aligned_cols=26 Identities=23% Similarity=0.502 Sum_probs=11.8
Q ss_pred eeehhhHHHHHH-HHHHHHH-HHhhhcC
Q 039322 375 AIVFPVLGALFL-SMALIAI-FILRKRK 400 (708)
Q Consensus 375 ~i~~~~~~~~~~-~~~~~~~-~~~r~R~ 400 (708)
+|+.+|+|.+++ +++++.+ +++|+|+
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 366666664433 3333333 3344433
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=87.20 E-value=1.8 Score=40.22 Aligned_cols=114 Identities=13% Similarity=0.113 Sum_probs=79.5
Q ss_pred cCCceeeEEEEEeeCCeeEEEEEeccCC-CHHHHhcccccccCCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEEccCCCC
Q 039322 494 RHRNIVKFYGFCSHARHSFLVYELLERG-SLAAILSSDTAAQELGWSQRMNVIKGVADALS-YLHHDCFPPIVHQDISSK 571 (708)
Q Consensus 494 ~h~~iv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~-~Lh~~~~~~ivH~dlk~~ 571 (708)
.||++ -...-.+++...+.++.-+++ ++.. + +.++...+++++.+|+.... +++.. +|--++|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-I------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-H------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-H------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 57887 444446677777777755443 3332 2 23788999999999999888 66665 89999999
Q ss_pred CeeeCCCCcEEEeecccccccCCCCCccccccccccccCccccccCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 039322 572 NLLLDLEYEAHVADFGIAKFLKPESSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLVLEAIKGKHPRD 643 (708)
Q Consensus 572 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~ 643 (708)
|++++.++.+++.-.|.-..+ +|.- .+...=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l-----------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL-----------------PPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB-----------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC-----------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877765433 2221 1222223456678888888888876
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=84.01 E-value=2.2 Score=34.10 Aligned_cols=47 Identities=13% Similarity=0.072 Sum_probs=26.3
Q ss_pred ccccccccccCCCCCCCEEEcccCcceeeCCCCCCCCCCCCEEEcccC
Q 039322 108 NLTGNISEALGIYPNLTFIDLSRNDFYGEISSNWGKCPKLGTLNVSMN 155 (708)
Q Consensus 108 ~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 155 (708)
.++.+...+|.++.+|+.+.|-.+ ++.+...+|.++.+|+.+.+.+.
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 444555555666666666655442 44455556666666666665543
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=79.69 E-value=4.1 Score=32.52 Aligned_cols=49 Identities=10% Similarity=0.093 Sum_probs=38.4
Q ss_pred CccccccCccCcCCCCCcEEEccCCccccccccccCCCCCCCEEEcccCc
Q 039322 83 NHFQGTIPKILRNCSSLIRVRLNSNNLTGNISEALGIYPNLTFIDLSRND 132 (708)
Q Consensus 83 n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~ 132 (708)
..++.+...+|.++.+|+++.|-. .++.+...+|.++.+|+.+.+....
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~-~v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQP-NIGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECT-TSSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CccCEecHHHhcCCCCCcEEEcCC-chheEcHHHHhccCCccEEEEcCCC
Confidence 445666677888889999988875 4666888889999999998887754
No 455
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=74.17 E-value=2.2 Score=28.06 Aligned_cols=28 Identities=7% Similarity=-0.189 Sum_probs=14.5
Q ss_pred EeeehhhHHH-HHHHHHHHHHHHhhhcCC
Q 039322 374 FAIVFPVLGA-LFLSMALIAIFILRKRKS 401 (708)
Q Consensus 374 ~~i~~~~~~~-~~~~~~~~~~~~~r~R~~ 401 (708)
..++++++++ ++++.+.+.+-..+++++
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCSC
T ss_pred eehhHHHHHHHHHHHHHHHHhhhhHhhcc
Confidence 3344444443 334455666666665544
No 456
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=68.74 E-value=0.63 Score=49.35 Aligned_cols=63 Identities=10% Similarity=-0.064 Sum_probs=17.5
Q ss_pred ccceeccccCccEEEEEeCC-CcEEEE------EEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEEee
Q 039322 440 AQYCIGNGGHGSVYRAELPS-GQVVAI------KKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFCSH 507 (708)
Q Consensus 440 ~~~~ig~G~~g~vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~ 507 (708)
+.+.+| ||.||+|.+.. ..+||| |..+... ...+....+.+|..+++.++|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~--~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG--VSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCcccccccc--ccccccccccccccccccccccccCCCcceEEe
Confidence 345566 99999997753 357888 6654321 112234568889999999999999999877643
No 457
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=66.46 E-value=4.5 Score=26.52 Aligned_cols=26 Identities=4% Similarity=-0.141 Sum_probs=13.5
Q ss_pred eehhhHHHH-HHHHHHHHHHHhhhcCC
Q 039322 376 IVFPVLGAL-FLSMALIAIFILRKRKS 401 (708)
Q Consensus 376 i~~~~~~~~-~~~~~~~~~~~~r~R~~ 401 (708)
+++++++++ ++....+.+-.++++++
T Consensus 16 VVgGv~~v~ii~~~~~~~~RRRr~~~k 42 (44)
T 2l2t_A 16 VIGGLFILVIVGLTFAVYVRRKSIKKK 42 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred ehHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 444444433 33455666666666554
No 458
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=64.65 E-value=5.4 Score=27.34 Aligned_cols=22 Identities=27% Similarity=0.466 Sum_probs=10.0
Q ss_pred eeEeeehhhHHHHHHHHHHHHH
Q 039322 372 KWFAIVFPVLGALFLSMALIAI 393 (708)
Q Consensus 372 ~~~~i~~~~~~~~~~~~~~~~~ 393 (708)
.+..++.++++.+.+..+++++
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~ 29 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILA 29 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555444433333
No 459
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=60.27 E-value=4.3 Score=26.16 Aligned_cols=9 Identities=11% Similarity=0.150 Sum_probs=3.4
Q ss_pred HHHHHHhhh
Q 039322 390 LIAIFILRK 398 (708)
Q Consensus 390 ~~~~~~~r~ 398 (708)
++.+++++|
T Consensus 30 v~~~~~~~r 38 (41)
T 2k9y_A 30 AGVGFFIHR 38 (41)
T ss_dssp HHHHHSSSS
T ss_pred HHHheeEee
Confidence 333333333
No 460
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=60.26 E-value=2.2 Score=26.36 Aligned_cols=24 Identities=21% Similarity=0.678 Sum_probs=11.5
Q ss_pred eehhhHHHHHHHHHHHHH-HHhhhc
Q 039322 376 IVFPVLGALFLSMALIAI-FILRKR 399 (708)
Q Consensus 376 i~~~~~~~~~~~~~~~~~-~~~r~R 399 (708)
++.+++|+++++++.+.+ +++|||
T Consensus 10 IaagVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHHHHHHHHHHHHhheEEeec
Confidence 556666644444443333 344444
No 461
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=58.95 E-value=9.7 Score=26.19 Aligned_cols=22 Identities=27% Similarity=0.412 Sum_probs=10.2
Q ss_pred eeEeeehhhHHHHHHHHHHHHH
Q 039322 372 KWFAIVFPVLGALFLSMALIAI 393 (708)
Q Consensus 372 ~~~~i~~~~~~~~~~~~~~~~~ 393 (708)
.|..++.++++.+.+..+++++
T Consensus 11 p~wiIi~svl~GLllL~li~~~ 32 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLA 32 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555444433333
No 462
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=55.49 E-value=6.1 Score=25.84 Aligned_cols=18 Identities=11% Similarity=-0.079 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHhhhcCC
Q 039322 384 LFLSMALIAIFILRKRKS 401 (708)
Q Consensus 384 ~~~~~~~~~~~~~r~R~~ 401 (708)
+....+.+.+-.++.+++
T Consensus 26 i~~l~~~~~~RRR~~~~k 43 (44)
T 2jwa_A 26 VLGVVFGILIKRRQQKIR 43 (44)
T ss_dssp HHHHHHHHHHHHHCSCCC
T ss_pred HHHHHHHhheehhhhhcc
Confidence 334455666666655543
No 463
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=52.24 E-value=9.6 Score=24.12 Aligned_cols=11 Identities=36% Similarity=0.600 Sum_probs=5.6
Q ss_pred eeehhhHHHHH
Q 039322 375 AIVFPVLGALF 385 (708)
Q Consensus 375 ~i~~~~~~~~~ 385 (708)
+++.+++|++.
T Consensus 12 aIAGiVvG~v~ 22 (38)
T 2k1k_A 12 EIVAVIFGLLL 22 (38)
T ss_dssp HHHHHHHHHHH
T ss_pred ceeeeehHHHH
Confidence 34555555543
No 464
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=40.21 E-value=17 Score=23.48 Aligned_cols=24 Identities=25% Similarity=0.375 Sum_probs=10.7
Q ss_pred eeEeeehhhHHHHHHHHHHHHHHH
Q 039322 372 KWFAIVFPVLGALFLSMALIAIFI 395 (708)
Q Consensus 372 ~~~~i~~~~~~~~~~~~~~~~~~~ 395 (708)
.+..++.++++.+.+..++++.++
T Consensus 9 p~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445555555444444333333
No 465
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=30.77 E-value=4.1e+02 Score=28.67 Aligned_cols=46 Identities=24% Similarity=0.210 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHH--HHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEeeccccc
Q 039322 538 WSQRMNVIKGVAD--ALSYLHHDCFPPIVHQDISSKNLLLDLEYEAHVADFGIAK 590 (708)
Q Consensus 538 ~~~~~~i~~~i~~--~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 590 (708)
+..+..++..+|- .+.|+=.- ||=.++|||++.+|++.=+|||..-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 4566666666553 45566533 5778999999999999999999874
No 466
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=29.02 E-value=1.8e+02 Score=28.69 Aligned_cols=140 Identities=14% Similarity=0.135 Sum_probs=71.1
Q ss_pred ccccceeccccCccEEEEEeCCCcEEEEEEcCCCCCcchhHhHHHHHHHHHHHHhccCCceeeEEEEE------------
Q 039322 438 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPCDQIADQKEFLIEVKALTEIRHRNIVKFYGFC------------ 505 (708)
Q Consensus 438 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~------------ 505 (708)
+...+..-.|. +.||.... ++..|+||... .-..+.+-.++...-.+..|...-+.-.-
T Consensus 71 v~~I~~s~~Gs-tgvff~~t-d~~~~VVK~s~-------~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~ 141 (342)
T 1cja_A 71 FKGIERSEKGT-EGLFFVET-ESGVFIVKRST-------NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAA 141 (342)
T ss_dssp EEEEEECCSTT-SCEEEEEE-SSCEEEEECCT-------THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHH
T ss_pred eeEEEeccCCC-CCeEEEEe-CCCEEEEeCcH-------HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHH
Confidence 33444445555 45665544 57789999542 11333444455444445555533332110
Q ss_pred ----------eeCCeeEEEEEeccCCCHHHHhcccccccCCCHHHHHHHHHHHH--HHHHHHHhCCCC-Ce-EEccCCCC
Q 039322 506 ----------SHARHSFLVYELLERGSLAAILSSDTAAQELGWSQRMNVIKGVA--DALSYLHHDCFP-PI-VHQDISSK 571 (708)
Q Consensus 506 ----------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~--~~l~~Lh~~~~~-~i-vH~dlk~~ 571 (708)
......+++|||.+|..|...-... ....++. +.+.++. -+++.+..+..+ +. .+..=.+.
T Consensus 142 ~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~ 216 (342)
T 1cja_A 142 IDKSFRVITTLANQANILLMELVRGITLNKLTTTS-APEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLD 216 (342)
T ss_dssp HCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGG
T ss_pred hhhhhHHHHHhhcccceehhhhcCCCccccchhhh-hhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChh
Confidence 0122456999999976654422110 0011222 2333332 234555544321 11 12235789
Q ss_pred CeeeCCCCc-EEEeecccccc
Q 039322 572 NLLLDLEYE-AHVADFGIAKF 591 (708)
Q Consensus 572 Nill~~~~~-~kl~Dfg~a~~ 591 (708)
|||++.++. +.++|-+.+..
T Consensus 217 NIL~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 217 NIMLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp GEEEESBTTCEEECSCCCCCC
T ss_pred heEEeCCCCeEEEEcCCcccc
Confidence 999977655 88999998864
Done!