BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039326
(126 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 41 DPDAAKCLSTLESVHGCVQEVLTAFLSLKVNLIGNACCKAFNEVDTNCWPK---VFPFDP 97
D D C +L + C E++ FL+ + IG CC A + CWP V F
Sbjct: 51 DEDTGYCWDSLMQLQHCSGELILFFLNGET-YIGPGCCSAIRTIGRKCWPTMIGVLGFTA 109
Query: 98 FFPPLLQSYC 107
+LQ YC
Sbjct: 110 QEGDMLQGYC 119
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 24 PGLATVNFENPLNEGGQDPDAAKCLSTLESVHGCVQEVLTAFLSLKVNLIGNACCKAFNE 83
P ++ N L GG +C + L + C E++ FL+ + L G +CC++ +
Sbjct: 29 PAESSTNIAARLQSGG----LMECWNALYELKSCTNEIVLFFLNGETKL-GVSCCESVDI 83
Query: 84 VDTNCWPKVFP---FDPFFPPLLQSYC 107
+ TNCWP + F P +L+ +C
Sbjct: 84 ITTNCWPAMLTSLGFTPEEANVLRGFC 110
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3
PE=2 SV=1
Length = 125
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 1 MAQVISFRY---SFALILTCSVMMAAPGLATVNFENPLNEGGQDPDAAKCLSTLESVHGC 57
MA SF + + L+L S P + N L GG +C L + C
Sbjct: 1 MASNTSFLFVTVTLLLVLNVSSRALPPVADSTNIAARLTGGG----LMQCWDALYELKSC 56
Query: 58 VQEVLTAFLSLKVNLIGNACCKAFNEVDTNCWPKVF 93
E++ FL+ + L G CC A + + T+CWP +
Sbjct: 57 TNEIVLFFLNGETKL-GYGCCNAVDVITTDCWPAML 91
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 28 TVNFENPLNEGGQDPDAAKCLSTLESVHGCVQEVLTAFLSLKVNLIGNACCKAFNEVDTN 87
+ N LN GG +C + L + C E++ FL+ + L G CC+A + T+
Sbjct: 31 STNIAARLNGGG----LMECWNALYELKSCTNEIVLFFLNGETKL-GVDCCQAVEVITTD 85
Query: 88 CWPKVFPFDPFFPP---LLQSYC 107
CWP + F +L+ +C
Sbjct: 86 CWPAMLTSLGFTSDETNVLRGFC 108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,429,004
Number of Sequences: 539616
Number of extensions: 1650278
Number of successful extensions: 2726
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2725
Number of HSP's gapped (non-prelim): 4
length of query: 126
length of database: 191,569,459
effective HSP length: 92
effective length of query: 34
effective length of database: 141,924,787
effective search space: 4825442758
effective search space used: 4825442758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)