Query 039326
Match_columns 126
No_of_seqs 100 out of 108
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 14:26:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039326.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039326hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fk5a_ a.52.1.1 (A:) Plant no 38.6 12 0.00088 23.2 3.0 36 46-86 3-38 (93)
2 d1mida_ a.52.1.1 (A:) Plant no 16.6 33 0.0024 21.0 1.9 34 47-86 3-36 (91)
3 d2bwba1 a.5.2.1 (A:328-371) DS 14.3 59 0.0043 17.8 2.4 29 39-68 16-44 (44)
4 d1k8rb_ d.15.1.5 (B:) Protein 11.1 48 0.0035 21.1 1.5 16 51-66 14-29 (95)
5 d1m2sa_ g.3.7.2 (A:) Bmtx3 {Bu 10.4 37 0.0027 18.2 0.6 14 43-56 10-23 (37)
6 d1dsqa_ g.40.1.1 (A:) Nucleic 10.3 36 0.0026 16.7 0.5 13 66-78 7-19 (26)
7 d1fx0b1 a.69.1.1 (B:378-485) F 9.7 92 0.0067 20.1 2.6 33 36-79 66-98 (108)
8 d1tmqb_ a.52.1.2 (B:) Trypsin/ 9.7 1.1E+02 0.0077 19.9 2.9 27 84-110 2-31 (117)
9 d1jb0l_ f.31.1.1 (L:) Photosys 8.2 1.6E+02 0.011 20.0 3.4 62 3-70 75-139 (151)
10 d1hssa_ a.52.1.2 (A:) 0.19 alp 7.1 86 0.0063 20.6 1.5 35 54-89 13-49 (120)
No 1
>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}
Probab=38.65 E-value=12 Score=23.22 Aligned_cols=36 Identities=11% Similarity=0.406 Sum_probs=24.5
Q ss_pred HHhhhhhcccchHHHHHHHHhhccccccChhhhHHHHhhcc
Q 039326 46 KCLSTLESVHGCVQEVLTAFLSLKVNLIGNACCKAFNEVDT 86 (126)
Q Consensus 46 ~Cwssl~~v~gC~~EI~~s~~~G~~~~Ig~~CC~Ai~~i~~ 86 (126)
+|=..+.++-.|.. +++|....-++.||.+++.+.+
T Consensus 3 ~C~~v~~~l~pCl~-----Yltg~~~~Ps~~CC~gv~~l~~ 38 (93)
T d1fk5a_ 3 SCGQVASAIAPCIS-----YARGQGSGPSAGCCSGVRSLNN 38 (93)
T ss_dssp CHHHHHHHHGGGHH-----HHTTCSSSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHhhhhHH-----HHhCCCCCCCCchhHHHHHHHH
Confidence 35555566666663 4566655678999999998763
No 2
>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=16.60 E-value=33 Score=20.98 Aligned_cols=34 Identities=12% Similarity=0.405 Sum_probs=23.1
Q ss_pred HhhhhhcccchHHHHHHHHhhccccccChhhhHHHHhhcc
Q 039326 47 CLSTLESVHGCVQEVLTAFLSLKVNLIGNACCKAFNEVDT 86 (126)
Q Consensus 47 Cwssl~~v~gC~~EI~~s~~~G~~~~Ig~~CC~Ai~~i~~ 86 (126)
|-+.+.++-.|.. +++|.- ...+.||.+++.+..
T Consensus 3 C~~v~~~l~pCl~-----Yl~g~~-~P~~~CC~gv~~L~~ 36 (91)
T d1mida_ 3 CGQVDSKMKPCLT-----YVQGGP-GPSGECCNGVRDLHN 36 (91)
T ss_dssp HHHHHHHHGGGHH-----HHTTCS-CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHH-----HHcCCC-CCCcchhhhHHHHHH
Confidence 5555566666763 345553 799999999988753
No 3
>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=14.26 E-value=59 Score=17.77 Aligned_cols=29 Identities=28% Similarity=0.326 Sum_probs=24.9
Q ss_pred CCCCChHHHhhhhhcccchHHHHHHHHhhc
Q 039326 39 GQDPDAAKCLSTLESVHGCVQEVLTAFLSL 68 (126)
Q Consensus 39 g~~~~~~~Cwssl~~v~gC~~EI~~s~~~G 68 (126)
|+ .|-.+|..+|....|-+..-++.+++|
T Consensus 16 GF-~d~~~Ni~AL~~t~GdV~~Aie~Ll~g 44 (44)
T d2bwba1 16 GF-FDFDRNVAALRRSGGSVQGALDSLLNG 44 (44)
T ss_dssp TC-CCHHHHHHHHHHHTTCHHHHHHHHHCC
T ss_pred CC-CcHHHHHHHHHHcCCCHHHHHHHHhCc
Confidence 44 588999999999999999888888876
No 4
>d1k8rb_ d.15.1.5 (B:) Protein kinase byr2 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=11.05 E-value=48 Score=21.11 Aligned_cols=16 Identities=25% Similarity=0.177 Sum_probs=12.4
Q ss_pred hhcccchHHHHHHHHh
Q 039326 51 LESVHGCVQEVLTAFL 66 (126)
Q Consensus 51 l~~v~gC~~EI~~s~~ 66 (126)
..|+.||.+||+.-++
T Consensus 14 ~vni~gC~~ai~~~~L 29 (95)
T d1k8rb_ 14 AVQSRGDYQKTLAIAL 29 (95)
T ss_dssp EEECCSCHHHHHHHHH
T ss_pred EEEeccCHHHHHHHHH
Confidence 5789999999665554
No 5
>d1m2sa_ g.3.7.2 (A:) Bmtx3 {Buthus martensii karsch [TaxId: 34649]}
Probab=10.45 E-value=37 Score=18.17 Aligned_cols=14 Identities=21% Similarity=0.608 Sum_probs=10.6
Q ss_pred ChHHHhhhhhcccc
Q 039326 43 DAAKCLSTLESVHG 56 (126)
Q Consensus 43 ~~~~Cwssl~~v~g 56 (126)
+..+||.+.+++-|
T Consensus 10 as~eCW~~CkkvtG 23 (37)
T d1m2sa_ 10 ASSECWTACKKVTG 23 (37)
T ss_dssp CHHHHHHHHHHHTS
T ss_pred chHHHHHHHHHHcc
Confidence 56899998877654
No 6
>d1dsqa_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=10.27 E-value=36 Score=16.75 Aligned_cols=13 Identities=23% Similarity=0.179 Sum_probs=9.1
Q ss_pred hhccccccChhhh
Q 039326 66 LSLKVNLIGNACC 78 (126)
Q Consensus 66 ~~G~~~~Ig~~CC 78 (126)
.-|++++|.++|=
T Consensus 7 scgktghikkdck 19 (26)
T d1dsqa_ 7 SCGKTGHIKRDCK 19 (26)
T ss_dssp TTCCBSSCTTTTT
T ss_pred ecCCcccchhhhh
Confidence 4577778877773
No 7
>d1fx0b1 a.69.1.1 (B:378-485) F1 ATP synthase beta subunit, domain 3 {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=9.71 E-value=92 Score=20.07 Aligned_cols=33 Identities=12% Similarity=0.125 Sum_probs=21.1
Q ss_pred CCCCCCCChHHHhhhhhcccchHHHHHHHHhhccccccChhhhH
Q 039326 36 NEGGQDPDAAKCLSTLESVHGCVQEVLTAFLSLKVNLIGNACCK 79 (126)
Q Consensus 36 ~~pg~~~~~~~Cwssl~~v~gC~~EI~~s~~~G~~~~Ig~~CC~ 79 (126)
+.||.-..+.++.++ ++.+++|+++++-..-.-
T Consensus 66 g~~G~~V~l~dTi~g-----------~~~IL~G~~D~~pE~~f~ 98 (108)
T d1fx0b1 66 GSPGKYVGLAETIRG-----------FQLILSGELDSLPEQAFY 98 (108)
T ss_dssp CSCCCCCCHHHHHHH-----------HHTTTTTTTSSSCGGGTT
T ss_pred CCCcCEecHHHHHhh-----------HHHHhCCCcCCCCHHHHh
Confidence 677765556665543 355789998777665443
No 8
>d1tmqb_ a.52.1.2 (B:) Trypsin/alpha-amylase inhibitor RBI {Eleusine coracana, seeds [TaxId: 4511]}
Probab=9.68 E-value=1.1e+02 Score=19.91 Aligned_cols=27 Identities=22% Similarity=0.477 Sum_probs=20.3
Q ss_pred hccCccccc-CCCCCCCh--HHHHhhhccc
Q 039326 84 VDTNCWPKV-FPFDPFFP--PLLQSYCTTI 110 (126)
Q Consensus 84 i~~~CwP~m-Fp~~Pf~p--~~LK~~Cs~~ 110 (126)
+.+.|+|-+ ||.+|+-. ..+|..|...
T Consensus 2 ~g~~C~Pg~~~p~~pL~~CR~Yv~~q~~g~ 31 (117)
T d1tmqb_ 2 VGTSCIPGMAIPHNPLDSCRWYVSTRTCGV 31 (117)
T ss_dssp GGGGCSBTTTBCSSTTTTHHHHHHHHHHSC
T ss_pred CCCcCCCCcccCCCccHHHHHHHHHHhhcC
Confidence 467899965 68888877 7788887554
No 9
>d1jb0l_ f.31.1.1 (L:) Photosystem I reaction center subunit XI, PsaL {Synechococcus elongatus [TaxId: 32046]}
Probab=8.17 E-value=1.6e+02 Score=20.04 Aligned_cols=62 Identities=11% Similarity=0.063 Sum_probs=41.0
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCCCCCCChHHHhhhhhc---ccchHHHHHHHHhhccc
Q 039326 3 QVISFRYSFALILTCSVMMAAPGLATVNFENPLNEGGQDPDAAKCLSTLES---VHGCVQEVLTAFLSLKV 70 (126)
Q Consensus 3 ~~~~~~~~~llv~lc~~~~v~~glaq~~~~~p~~~pg~~~~~~~Cwssl~~---v~gC~~EI~~s~~~G~~ 70 (126)
-++|..-.++++++|+.+.-.++..... .+.-+....|=|+.+.+ +-||.+.++-.++...+
T Consensus 75 Gllsaiglv~Ilt~~L~lYg~~sf~~~~------~~~d~l~t~~gWs~F~~GF~~Gg~GGa~fAy~Ll~n~ 139 (151)
T d1jb0l_ 75 GLISGIALILVATACLAAYGLVSFQKGG------SSSDPLKTSEGWSQFTAGFFVGAMGSAFVAFFLLENF 139 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSCC------CSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCCCC------CCcccccCcccHHHhhchhhhccccHHHHHHHHHcch
Confidence 4566677777888888887554433211 11112344678999887 89999998888876665
No 10
>d1hssa_ a.52.1.2 (A:) 0.19 alpha-amylase inhibitor {Wheat (Triticum aestivum) [TaxId: 4565]}
Probab=7.08 E-value=86 Score=20.60 Aligned_cols=35 Identities=14% Similarity=0.343 Sum_probs=23.8
Q ss_pred ccchHHHHHHHHhhccc--cccChhhhHHHHhhccCcc
Q 039326 54 VHGCVQEVLTAFLSLKV--NLIGNACCKAFNEVDTNCW 89 (126)
Q Consensus 54 v~gC~~EI~~s~~~G~~--~~Ig~~CC~Ai~~i~~~Cw 89 (126)
+++|-.. ++.=..|.- ..+-.+||+-+..|.+.|.
T Consensus 13 L~~CR~y-v~~q~~G~~~~~~~k~~CC~eLa~i~~~CR 49 (120)
T d1hssa_ 13 LPACRPL-LRLQCNGSQVPEAVLRDCCQQLAHISEWCR 49 (120)
T ss_dssp CTTHHHH-HHHHTTTCCCCHHHHHHHHHHHHTSCTTTH
T ss_pred cHHHHHH-HHHHhcCCCCcchHHHHHHHHHHhcCcccc
Confidence 6778754 444344432 3455889999999999886
Done!