Query 039336
Match_columns 167
No_of_seqs 231 out of 1986
Neff 8.6
Searched_HMMs 13730
Date Mon Mar 25 14:35:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039336.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039336hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cpxa1 d.58.7.1 (A:291-392) R 99.9 4.7E-26 3.4E-30 151.9 8.8 99 61-163 2-100 (102)
2 d2cpza1 d.58.7.1 (A:383-484) C 99.9 6.9E-25 5.1E-29 146.4 12.4 89 73-165 14-102 (102)
3 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 4E-24 2.9E-28 140.4 12.5 87 75-165 5-91 (93)
4 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 2.3E-24 1.7E-28 138.2 10.8 80 77-160 2-81 (82)
5 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 3.1E-24 2.3E-28 139.5 11.6 83 75-161 5-87 (88)
6 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 4.1E-24 3E-28 139.2 10.6 83 76-162 4-86 (89)
7 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 5.6E-24 4.1E-28 138.8 11.2 84 75-162 6-89 (90)
8 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 7E-24 5.1E-28 139.2 11.4 85 75-163 7-91 (93)
9 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 1.1E-23 7.7E-28 135.0 11.4 79 78-160 3-81 (82)
10 d1cvja1 d.58.7.1 (A:11-90) Pol 99.9 7.7E-24 5.6E-28 135.3 10.5 78 79-160 2-79 (80)
11 d2cpha1 d.58.7.1 (A:454-547) P 99.9 1.3E-23 9.6E-28 138.1 11.6 87 75-164 6-93 (94)
12 d1whwa_ d.58.7.1 (A:) Probable 99.9 3.1E-23 2.3E-27 137.5 12.1 86 75-164 6-91 (99)
13 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.9 2.3E-23 1.7E-27 135.8 10.5 85 77-165 5-89 (90)
14 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.9 5.8E-23 4.3E-27 133.9 12.4 85 75-165 6-90 (90)
15 d1no8a_ d.58.7.1 (A:) Nuclear 99.9 3.9E-23 2.9E-27 131.3 10.9 77 79-160 2-78 (78)
16 d2cqca1 d.58.7.1 (A:109-191) A 99.9 3.5E-23 2.5E-27 133.0 10.6 78 74-155 6-83 (83)
17 d2ghpa1 d.58.7.1 (A:116-196) U 99.9 2.9E-23 2.1E-27 132.8 9.9 79 78-160 2-80 (81)
18 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 8.5E-23 6.2E-27 143.1 12.7 83 76-162 41-123 (139)
19 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.9 4.5E-23 3.2E-27 132.4 9.8 80 80-163 1-81 (83)
20 d2cq3a1 d.58.7.1 (A:110-202) R 99.9 1.9E-22 1.4E-26 132.3 13.0 83 74-162 8-90 (93)
21 d2u2fa_ d.58.7.1 (A:) Splicing 99.9 2.5E-23 1.8E-27 134.4 8.6 81 78-162 2-82 (85)
22 d1fxla2 d.58.7.1 (A:119-203) H 99.9 7.2E-23 5.2E-27 132.1 10.6 78 77-158 6-85 (85)
23 d2cpfa1 d.58.7.1 (A:362-446) P 99.9 5.2E-23 3.8E-27 132.7 9.8 81 80-161 1-81 (85)
24 d2cqga1 d.58.7.1 (A:96-185) TA 99.9 1.4E-22 1E-26 132.1 11.9 84 74-163 5-88 (90)
25 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.9 1.3E-22 9.3E-27 134.0 11.7 87 74-164 5-97 (98)
26 d1x4ba1 d.58.7.1 (A:8-110) Het 99.9 2E-23 1.4E-27 139.5 7.7 83 77-164 20-102 (103)
27 d1cvja2 d.58.7.1 (A:91-179) Po 99.9 5.5E-23 4E-27 133.8 9.2 80 78-163 9-88 (89)
28 d1b7fa2 d.58.7.1 (A:205-289) S 99.9 1.1E-22 8.2E-27 131.2 10.6 79 76-158 5-85 (85)
29 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.9 1.8E-22 1.3E-26 130.0 10.9 79 77-160 6-84 (84)
30 d2f9da1 d.58.7.1 (A:12-125) Pr 99.9 1.9E-22 1.4E-26 136.7 11.6 81 73-160 3-83 (114)
31 d2ghpa3 d.58.7.1 (A:206-291) U 99.9 6E-23 4.3E-27 132.8 8.5 83 76-162 3-86 (86)
32 d1p1ta_ d.58.7.1 (A:) Cleavage 99.9 1E-22 7.4E-27 136.1 9.1 81 78-162 9-89 (104)
33 d2cqda1 d.58.7.1 (A:1-103) RNA 99.9 3.5E-22 2.6E-26 133.3 11.8 82 77-163 10-91 (103)
34 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.9 4.6E-23 3.3E-27 134.7 6.7 81 75-161 11-91 (91)
35 d1uawa_ d.58.7.1 (A:) Musashi- 99.9 5.1E-23 3.7E-27 130.5 6.7 76 78-158 1-76 (77)
36 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.9 6.7E-22 4.9E-26 130.0 12.3 83 73-162 10-92 (95)
37 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.9 5.2E-22 3.8E-26 130.9 11.3 79 75-163 16-94 (96)
38 d2cpea1 d.58.7.1 (A:353-453) R 99.9 9E-22 6.6E-26 130.5 12.2 89 75-164 6-99 (101)
39 d2adca2 d.58.7.1 (A:444-531) P 99.9 4.9E-22 3.6E-26 128.9 10.4 79 75-161 8-87 (88)
40 d2cq4a1 d.58.7.1 (A:132-232) R 99.9 1.4E-22 1.1E-26 134.8 7.9 80 77-161 18-97 (101)
41 d1nu4a_ d.58.7.1 (A:) Spliceso 99.9 2.2E-22 1.6E-26 131.4 8.5 82 75-163 1-86 (91)
42 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.9 9.6E-22 7E-26 126.2 10.3 78 74-160 5-83 (83)
43 d1l3ka2 d.58.7.1 (A:103-181) N 99.9 1.3E-21 9.3E-26 124.3 10.8 76 78-158 3-78 (79)
44 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.9 1.3E-21 9.6E-26 130.5 11.0 87 74-165 12-98 (104)
45 d1hd0a_ d.58.7.1 (A:) Heteroge 99.9 5.7E-22 4.1E-26 125.0 8.5 75 79-158 1-75 (75)
46 d1fjca_ d.58.7.1 (A:) Nucleoli 99.9 9.1E-22 6.7E-26 129.6 8.9 82 74-164 13-94 (96)
47 d2disa1 d.58.7.1 (A:8-103) Hyp 99.9 1.1E-21 8.3E-26 129.1 9.3 86 77-165 1-89 (96)
48 d2msta_ d.58.7.1 (A:) Neural R 99.9 1.1E-21 8.2E-26 123.3 8.6 75 79-158 1-75 (75)
49 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.9 1.1E-21 8.2E-26 125.1 8.3 76 78-163 2-78 (80)
50 d2cpda1 d.58.7.1 (A:223-308) A 99.9 1.9E-21 1.4E-25 125.5 9.5 77 76-162 7-83 (86)
51 d1whxa_ d.58.7.1 (A:) Probable 99.8 2.4E-21 1.7E-25 130.5 10.2 77 76-162 9-85 (111)
52 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 1.7E-21 1.2E-25 129.5 9.2 80 76-160 17-96 (101)
53 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 3.6E-21 2.7E-25 122.3 10.2 76 75-162 3-78 (79)
54 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 9.2E-22 6.7E-26 124.0 7.1 75 79-158 1-75 (75)
55 d2cpja1 d.58.7.1 (A:65-150) No 99.8 2.9E-21 2.1E-25 124.8 9.4 77 76-162 7-83 (86)
56 d2adca1 d.58.7.1 (A:335-443) P 99.8 4.1E-21 3E-25 129.0 10.0 77 77-162 2-79 (109)
57 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 7.4E-21 5.4E-25 122.6 10.7 77 77-159 6-82 (85)
58 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 1.2E-20 9E-25 122.2 11.9 81 72-162 3-85 (88)
59 d1wg1a_ d.58.7.1 (A:) Probable 99.8 3.5E-21 2.6E-25 124.9 9.2 77 76-163 4-80 (88)
60 d2cqpa1 d.58.7.1 (A:917-1002) 99.8 5.6E-21 4.1E-25 123.2 10.1 79 76-158 8-86 (86)
61 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.8 7.2E-21 5.3E-25 119.8 9.2 72 80-162 1-72 (75)
62 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 8.7E-21 6.4E-25 125.4 9.9 79 73-163 11-90 (98)
63 d2cpia1 d.58.7.1 (A:101-189) E 99.8 3.5E-21 2.6E-25 125.1 7.6 79 77-156 8-89 (89)
64 d1whya_ d.58.7.1 (A:) Putative 99.8 2.3E-20 1.7E-24 123.0 10.9 81 73-163 13-95 (97)
65 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 6.4E-20 4.6E-24 122.3 12.2 86 71-166 9-96 (104)
66 d2adba1 d.58.7.1 (A:177-284) P 99.8 2.2E-20 1.6E-24 125.4 9.9 81 74-162 4-86 (108)
67 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 1.3E-20 9.6E-25 122.1 7.6 80 75-165 3-82 (88)
68 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 4.5E-20 3.3E-24 116.1 9.7 74 78-158 1-74 (75)
69 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 4.1E-20 3E-24 122.1 9.8 78 75-163 13-90 (98)
70 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 6.5E-21 4.7E-25 119.0 5.5 71 80-154 1-71 (72)
71 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 8.8E-20 6.4E-24 121.6 11.2 85 75-164 13-97 (104)
72 d1weza_ d.58.7.1 (A:) Heteroge 99.8 4.8E-20 3.5E-24 122.5 9.7 84 74-164 12-95 (102)
73 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.8 8.5E-20 6.2E-24 120.7 9.9 80 73-162 14-96 (99)
74 d3begb1 d.58.7.1 (B:121-207) S 99.8 1.2E-20 8.6E-25 122.1 5.0 72 79-161 2-73 (87)
75 d2cpya1 d.58.7.1 (A:536-638) R 99.8 1.3E-19 9.7E-24 120.5 9.7 79 76-159 7-85 (103)
76 d1x4da1 d.58.7.1 (A:8-96) Matr 99.8 2.6E-19 1.9E-23 116.2 10.7 81 74-164 5-88 (89)
77 d1wela1 d.58.7.1 (A:412-523) R 99.8 1.5E-19 1.1E-23 122.1 8.4 84 72-160 13-96 (112)
78 d1weya_ d.58.7.1 (A:) Calcipre 99.8 5.2E-19 3.8E-23 117.9 7.1 78 76-163 4-86 (104)
79 d1u1qa_ d.58.7.1 (A:) Nuclear 99.7 2.6E-18 1.9E-22 124.4 9.0 86 74-164 94-179 (183)
80 d1u2fa_ d.58.7.1 (A:) Splicing 99.7 3.7E-20 2.7E-24 120.4 -1.1 80 78-159 2-83 (90)
81 d1jmta_ d.58.7.3 (A:) d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=4.7e-26 Score=151.94 Aligned_cols=99 Identities=45% Similarity=0.804 Sum_probs=90.4
Q ss_pred hhhcCCCCCCCCCCCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHH
Q 039336 61 EILSLPMFKNYAAGNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRAL 140 (167)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al 140 (167)
+++.+|.++++.+..|+++|||+|||..+++++|+.+|++ ||.|..+.+.. ...+|+++|||||+|.+.++|.+|+
T Consensus 2 e~~~~p~~~~~~~~~ps~tl~V~nLp~~~t~~~l~~~f~~-~G~v~~~~~~~---~~~~g~~~g~~fV~f~~~~~A~~Ai 77 (102)
T d2cpxa1 2 EIRKIPMFSSYNPGEPNKVLYLKNLSPRVTERDLVSLFAR-FQEKKGPPIQF---RMMTGRMRGQAFITFPNKEIAWQAL 77 (102)
T ss_dssp SSCCCSCCCCCCCCSCCSEEEEECCCTTCCHHHHHHHTHH-HHHSSSSCCEE---EEECSSSCSEEEEECSSHHHHHHHH
T ss_pred hhhhCCCCCCCCCCCCCCEEEEeCCCCCCCHHHHHHHHhh-ccceeeEEeec---ccccccccccceEEeccHHHHHHHH
Confidence 5577899999999999999999999999999999999999 99998877543 3468999999999999999999999
Q ss_pred HHhCCceeCCeeeEEEeecCCCC
Q 039336 141 NLVNGYVFKGKPMIIQFGRNPAA 163 (167)
Q Consensus 141 ~~l~g~~l~gr~l~v~~a~~~~~ 163 (167)
..|||..|.|++|+|+||+++.+
T Consensus 78 ~~l~g~~~~g~~l~V~~ak~k~~ 100 (102)
T d2cpxa1 78 HLVNGYKLYGKILVIEFGKNKKQ 100 (102)
T ss_dssp HHSTTCBCSSCBCEEEECCCCSC
T ss_pred HHhCCCEECCEEEEEEeCCCccc
Confidence 99999999999999999998764
No 2
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=6.9e-25 Score=146.42 Aligned_cols=89 Identities=24% Similarity=0.334 Sum_probs=81.4
Q ss_pred CCCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCee
Q 039336 73 AGNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKP 152 (167)
Q Consensus 73 ~~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~ 152 (167)
.++++++|||+|||+++++++|+.+|++ ||.|.+++++ ....+|.++|||||+|.+.++|..||..|||..|+|++
T Consensus 14 ~~p~~~~l~V~nLp~~~te~~l~~~F~~-~G~i~~~~~~---~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~ 89 (102)
T d2cpza1 14 EGPEGANLFIYHLPQEFGDQDLLQMFMP-FGNVVSAKVF---IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKR 89 (102)
T ss_dssp CCSTTCCEEEESCCSSCCHHHHHHHHGG-GSCCSEEEEE---ECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHh-hcccccccee---eecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEE
Confidence 3456789999999999999999999999 9999988764 33678999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCC
Q 039336 153 MIIQFGRNPAAAK 165 (167)
Q Consensus 153 l~v~~a~~~~~~k 165 (167)
|+|+||+++.++|
T Consensus 90 i~V~~a~~k~~~k 102 (102)
T d2cpza1 90 LKVQLKRSKNDSK 102 (102)
T ss_dssp CEEECCCCSCCCC
T ss_pred EEEEEeCCCCCCC
Confidence 9999999998765
No 3
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=4e-24 Score=140.39 Aligned_cols=87 Identities=20% Similarity=0.291 Sum_probs=79.0
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
.++++|||+|||+.+|+++|+.+|++ ||.|.++.++. ...+|.++|||||+|.+.++|..|+..|||..|.|++|+
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~-~G~i~~v~i~~---~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~ 80 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSK-SGDIKKIIMGL---DKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIR 80 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGG-GSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHH-HCCcceecccc---ccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEE
Confidence 46789999999999999999999999 99999988653 367899999999999999999999999999999999999
Q ss_pred EEeecCCCCCC
Q 039336 155 IQFGRNPAAAK 165 (167)
Q Consensus 155 v~~a~~~~~~k 165 (167)
|+||.+....+
T Consensus 81 V~~a~~~~~gr 91 (93)
T d1h2vz_ 81 TDWDAGFKEGR 91 (93)
T ss_dssp EEEESCCCTTC
T ss_pred EEEcCCCCCCC
Confidence 99998765443
No 4
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.91 E-value=2.3e-24 Score=138.23 Aligned_cols=80 Identities=24% Similarity=0.467 Sum_probs=74.5
Q ss_pred CCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEE
Q 039336 77 ASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQ 156 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~ 156 (167)
+++|||+|||+++++++|+++|++ ||.|.+++++ +...+|.++|||||+|.+.++|++|++.|||..+.|++|+|+
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~-~G~v~~~~i~---~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~ 77 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRA-IGPINTCRIM---RDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVS 77 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHT-TSCEEEEECC---EETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHH-hCCcceeeee---eecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 578999999999999999999999 9999998864 336789999999999999999999999999999999999999
Q ss_pred eecC
Q 039336 157 FGRN 160 (167)
Q Consensus 157 ~a~~ 160 (167)
||++
T Consensus 78 ~a~p 81 (82)
T d1b7fa1 78 YARP 81 (82)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 9975
No 5
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.91 E-value=3.1e-24 Score=139.51 Aligned_cols=83 Identities=18% Similarity=0.287 Sum_probs=76.2
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
..+++|||+|||+.+++++|+.+|++ ||.|.+++++. ...+|+++|||||+|.+.++|.+|+..|||..|.|+.|+
T Consensus 5 ~~~~~l~V~nL~~~~t~~~l~~~F~~-~G~i~~v~i~~---d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~ 80 (88)
T d1rk8a_ 5 VEGWILFVTSIHEEAQEDEIQEKFCD-YGEIKNIHLNL---DRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQ 80 (88)
T ss_dssp C-CEEEEEESCCTTCCHHHHHHHHGG-GSCEEEEEEEE---CTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHH-cCCcccccccc---cccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 35689999999999999999999999 99999988653 367899999999999999999999999999999999999
Q ss_pred EEeecCC
Q 039336 155 IQFGRNP 161 (167)
Q Consensus 155 v~~a~~~ 161 (167)
|+||.++
T Consensus 81 V~~a~~k 87 (88)
T d1rk8a_ 81 VDWCFVK 87 (88)
T ss_dssp EEESEEC
T ss_pred EEEecCC
Confidence 9999876
No 6
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=4.1e-24 Score=139.20 Aligned_cols=83 Identities=27% Similarity=0.372 Sum_probs=76.2
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
..++|||+|||+++++++|+++|++ ||.|.+++++.+ ..+|.++|||||+|.+.++|.+|+..|||..|.|++|+|
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~-~G~i~~v~i~~d---~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v 79 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIP-FGDITDIQIPLD---YETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRV 79 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTT-TSCCCCEECCCC---SSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhh-CCeEEecccccc---cccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEE
Confidence 3578999999999999999999999 999999886533 668999999999999999999999999999999999999
Q ss_pred EeecCCC
Q 039336 156 QFGRNPA 162 (167)
Q Consensus 156 ~~a~~~~ 162 (167)
++|+++.
T Consensus 80 ~~a~p~~ 86 (89)
T d2cqba1 80 NLAKPMR 86 (89)
T ss_dssp EECCCCC
T ss_pred EEeCCCC
Confidence 9998764
No 7
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=5.6e-24 Score=138.84 Aligned_cols=84 Identities=24% Similarity=0.388 Sum_probs=77.1
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
.+.++|||+|||+.+++++|+.+|++ ||.|..++++. ...+|.++|||||+|.+.++|.+|+..|||..|.|+.|+
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~-~G~v~~v~i~~---d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~ 81 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRP-FGSISRIYLAK---DKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILN 81 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTT-TCCEEEEEEEE---CSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHH-hcccccccccc---cccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEE
Confidence 35678999999999999999999999 99999888653 356899999999999999999999999999999999999
Q ss_pred EEeecCCC
Q 039336 155 IQFGRNPA 162 (167)
Q Consensus 155 v~~a~~~~ 162 (167)
|+||+++.
T Consensus 82 v~~akp~~ 89 (90)
T d2cq0a1 82 VEWAKPST 89 (90)
T ss_dssp EEESSCCC
T ss_pred EEeeeCCC
Confidence 99999775
No 8
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=7e-24 Score=139.20 Aligned_cols=85 Identities=22% Similarity=0.304 Sum_probs=77.6
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
.+.++|||+|||+.+|+++|+.+|++ ||.|.+++++ ....+|.++|||||+|.+.++|+.|+..|||..|+|+.|+
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~-~G~v~~v~~~---~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~ 82 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQ-AGPVVNTHMP---KDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIR 82 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHT-TSCEEEEECC---BCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHH-hCCcccccee---ecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 45689999999999999999999999 9999988864 3367899999999999999999999999999999999999
Q ss_pred EEeecCCCC
Q 039336 155 IQFGRNPAA 163 (167)
Q Consensus 155 v~~a~~~~~ 163 (167)
|++|+++..
T Consensus 83 V~~A~~~~~ 91 (93)
T d1x5ua1 83 VNKASAHNK 91 (93)
T ss_dssp EEETTTTSC
T ss_pred EEEcCCCCC
Confidence 999988763
No 9
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=1.1e-23 Score=135.01 Aligned_cols=79 Identities=25% Similarity=0.465 Sum_probs=73.5
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQF 157 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~ 157 (167)
++|||+|||+.+++++|+++|++ ||.|..++++ ....+|.++|||||+|.+.++|+.|+..|||..|.|++|+|+|
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~-~G~v~~v~i~---~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~ 78 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGS-IGEIESCKLV---RDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 78 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHT-TSCEEEEEEE---ECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHH-hCCcccccce---eeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 57999999999999999999999 9999998864 3367899999999999999999999999999999999999999
Q ss_pred ecC
Q 039336 158 GRN 160 (167)
Q Consensus 158 a~~ 160 (167)
|++
T Consensus 79 AkP 81 (82)
T d1fxla1 79 ARP 81 (82)
T ss_dssp CCC
T ss_pred eeC
Confidence 974
No 10
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=7.7e-24 Score=135.25 Aligned_cols=78 Identities=32% Similarity=0.406 Sum_probs=73.0
Q ss_pred EEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEee
Q 039336 79 VLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFG 158 (167)
Q Consensus 79 ~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~a 158 (167)
+|||+|||+.+|+++|+.+|++ ||.|.+++++. ...+|+++|||||+|.++++|..|++.|||..+.||+|+|+||
T Consensus 2 slfV~nL~~~~te~~l~~~F~~-~G~i~~v~i~~---d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a 77 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSP-AGPILSIRVCR---DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWS 77 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGG-GSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEEC
T ss_pred EEEEeCCCCcCCHHHHHHHHHH-hCCEeEEEEEe---cccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 6999999999999999999999 99999998753 3678999999999999999999999999999999999999999
Q ss_pred cC
Q 039336 159 RN 160 (167)
Q Consensus 159 ~~ 160 (167)
+.
T Consensus 78 ~~ 79 (80)
T d1cvja1 78 QR 79 (80)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 11
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.90 E-value=1.3e-23 Score=138.13 Aligned_cols=87 Identities=17% Similarity=0.379 Sum_probs=77.3
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHh-CCceeCCeee
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLV-NGYVFKGKPM 153 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l-~g~~l~gr~l 153 (167)
.++++|||+|||+.+++++|+.+|++ ||.|.+++++.+ ...+|.++|||||+|.+.++|.+||..| ||..|.|++|
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~-~G~i~~v~i~~~--~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l 82 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFST-FGELKTVRLPKK--MTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRL 82 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHT-TSCEEEEECCCC--CSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHH-hCCceEEEEEec--cccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEE
Confidence 45678999999999999999999999 999999886532 2347999999999999999999999998 8999999999
Q ss_pred EEEeecCCCCC
Q 039336 154 IIQFGRNPAAA 164 (167)
Q Consensus 154 ~v~~a~~~~~~ 164 (167)
+|+||.++...
T Consensus 83 ~V~~A~~~~~~ 93 (94)
T d2cpha1 83 VLEWADSEVTV 93 (94)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEcCCCCCc
Confidence 99999887643
No 12
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.90 E-value=3.1e-23 Score=137.48 Aligned_cols=86 Identities=24% Similarity=0.353 Sum_probs=77.9
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
..+++|||+|||+.+++++|+++|.+ ||.|..++++. +..+|+++|||||+|.+.++|..||..|||..|.|++|+
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~-~g~v~~v~i~~---d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~ 81 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSA-YGPLSELHYPI---DSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLH 81 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHT-TSCEEEEECCC---CTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHh-cCCceeeeecc---cccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 44678999999999999999999999 99999888653 367899999999999999999999999999999999999
Q ss_pred EEeecCCCCC
Q 039336 155 IQFGRNPAAA 164 (167)
Q Consensus 155 v~~a~~~~~~ 164 (167)
|.+|+.+...
T Consensus 82 V~~a~~~~~~ 91 (99)
T d1whwa_ 82 VLPSTIKKEA 91 (99)
T ss_dssp EEECCCCSTT
T ss_pred EEECCCCCcc
Confidence 9999877543
No 13
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.3e-23 Score=135.75 Aligned_cols=85 Identities=22% Similarity=0.368 Sum_probs=77.6
Q ss_pred CCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEE
Q 039336 77 ASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQ 156 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~ 156 (167)
..+|||+|||+.+++++|+.+|++ ||.|..+.++ ....+|.++|||||+|.+.++|..|+..|||..|+|++|+|+
T Consensus 5 ~~kifV~nLp~~~t~~~l~~~F~~-~G~i~~~~~~---~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~ 80 (90)
T d1x5sa1 5 EGKLFVGGLSFDTNEQSLEQVFSK-YGQISEVVVV---KDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80 (90)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHH-HSCCCEEEEC---CCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEE
T ss_pred CCEEEEECCCCcCCHHHHHHhhhc-cccccceeec---cccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 467999999999999999999999 9999887653 336789999999999999999999999999999999999999
Q ss_pred eecCCCCCC
Q 039336 157 FGRNPAAAK 165 (167)
Q Consensus 157 ~a~~~~~~k 165 (167)
+|.++.+.+
T Consensus 81 ~a~~~~~~r 89 (90)
T d1x5sa1 81 QAGKSSDNR 89 (90)
T ss_dssp EEECCCCCC
T ss_pred EcCCCCCCC
Confidence 999887765
No 14
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=5.8e-23 Score=133.91 Aligned_cols=85 Identities=25% Similarity=0.345 Sum_probs=74.7
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
.+.++|||+|||+.+|+++|+.+|++ ||.|..++++.+ ....+|||||+|.+.++|.+|+..|||..|.|+.|+
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~-~G~i~~v~i~~d-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~ 79 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQ-IGPCKSCKMITE-----HTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVK 79 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHH-HSCEEEEEEECC-----CCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHh-cCCceeeeeecc-----cCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 35678999999999999999999999 999998875432 333589999999999999999999999999999999
Q ss_pred EEeecCCCCCC
Q 039336 155 IQFGRNPAAAK 165 (167)
Q Consensus 155 v~~a~~~~~~k 165 (167)
|.||+++...|
T Consensus 80 v~~a~~~~~~k 90 (90)
T d2cqia1 80 VNWATTPSSQK 90 (90)
T ss_dssp EEECCCTTCCC
T ss_pred EEEcCCCCCCC
Confidence 99999876543
No 15
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.89 E-value=3.9e-23 Score=131.31 Aligned_cols=77 Identities=31% Similarity=0.409 Sum_probs=71.7
Q ss_pred EEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEee
Q 039336 79 VLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFG 158 (167)
Q Consensus 79 ~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~a 158 (167)
+|||+|||+.+++++|+++|++ ||.|.+++++ ...+|+++|||||+|.+.++|.+|++.|||..+.|++|+|++|
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~-~G~v~~~~i~----~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a 76 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAE-FGTLKKAAVH----YDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV 76 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHH-HSCEEEEEES----CSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEE
T ss_pred EEEEECCCCCCCHHHHHHHHHH-hCCCeEEEEE----EeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 4999999999999999999999 9999988854 3468999999999999999999999999999999999999999
Q ss_pred cC
Q 039336 159 RN 160 (167)
Q Consensus 159 ~~ 160 (167)
.+
T Consensus 77 ~S 78 (78)
T d1no8a_ 77 TS 78 (78)
T ss_dssp CC
T ss_pred eC
Confidence 75
No 16
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=3.5e-23 Score=132.99 Aligned_cols=78 Identities=27% Similarity=0.355 Sum_probs=71.6
Q ss_pred CCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeee
Q 039336 74 GNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPM 153 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l 153 (167)
+.|+++|||+|||+.+|+++|+++|++ ||.|.+++++. ...+|+++|||||+|.+.++|..|+..|||..|.||+|
T Consensus 6 p~~~~~l~V~nL~~~~te~~l~~~F~~-~G~i~~v~i~~---~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i 81 (83)
T d2cqca1 6 PDPNCCLGVFGLSLYTTERDLREVFSK-YGPIADVSIVY---DQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRI 81 (83)
T ss_dssp CCGGGCEEEESCCSSCCHHHHHHHHHT-TSCEEEEEEEE---CSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHH-hCCCccccccc---cccccccccceEEEECCHHHHHHHHHHcCCCEECCEEe
Confidence 456789999999999999999999999 99999988653 36689999999999999999999999999999999999
Q ss_pred EE
Q 039336 154 II 155 (167)
Q Consensus 154 ~v 155 (167)
+|
T Consensus 82 ~V 83 (83)
T d2cqca1 82 RV 83 (83)
T ss_dssp EE
T ss_pred EC
Confidence 87
No 17
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89 E-value=2.9e-23 Score=132.75 Aligned_cols=79 Identities=13% Similarity=0.186 Sum_probs=67.4
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQF 157 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~ 157 (167)
++|||+|||+++|+++|+++|++ ||.|..+.++ ....+|.++|||||+|.+.++|.+|+..|||..+.|++|+|.+
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~-~G~v~~~~~~---~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~ 77 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQD-INVVALSIRL---PSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKV 77 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHH-TTCCCCEEEC---C-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred cEEEEECCCCcCCHHHHHHHHHH-hCcEEeeeee---cccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 78999999999999999999999 9999877643 3356789999999999999999999999999999999999999
Q ss_pred ecC
Q 039336 158 GRN 160 (167)
Q Consensus 158 a~~ 160 (167)
|++
T Consensus 78 a~P 80 (81)
T d2ghpa1 78 SNP 80 (81)
T ss_dssp CCC
T ss_pred ccC
Confidence 975
No 18
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.89 E-value=8.5e-23 Score=143.14 Aligned_cols=83 Identities=20% Similarity=0.274 Sum_probs=76.2
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
..++|||+|||+++|+++|+.+|++ ||.|.+++++ ....+|+++|||||+|.+.++|.+||..|||..|.||.|+|
T Consensus 41 ~~~~l~V~nLp~~~te~~l~~~F~~-~G~i~~v~i~---~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V 116 (139)
T d1u6fa1 41 VLRNLMVNYIPTTVDEVQLRQLFER-YGPIESVKIV---CDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKV 116 (139)
T ss_dssp TTSEEEEESCSTTCCHHHHHHHHHH-HSCEEEEEEE---EETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHh-hccccccccc---cccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 4568999999999999999999999 9999998864 34678999999999999999999999999999999999999
Q ss_pred EeecCCC
Q 039336 156 QFGRNPA 162 (167)
Q Consensus 156 ~~a~~~~ 162 (167)
.||+.+.
T Consensus 117 ~~a~~~~ 123 (139)
T d1u6fa1 117 ALAASGH 123 (139)
T ss_dssp EESSCCC
T ss_pred EEcCCCC
Confidence 9997654
No 19
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=4.5e-23 Score=132.44 Aligned_cols=80 Identities=23% Similarity=0.462 Sum_probs=72.1
Q ss_pred EEecCCCCCCCHHHHHHHHhhccCCeeee-eeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEee
Q 039336 80 LYIKNLAKDVIPDDFFFIFGSLFGSIDAA-KCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFG 158 (167)
Q Consensus 80 lfV~nLp~~~t~~~L~~~F~~~~G~i~~~-~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~a 158 (167)
|||+|||+++|+++|+++|++ ||.|..+ ++ +....+|+++|||||+|.+.++|.+|+..|+|..+.|++|+|++|
T Consensus 1 lfV~nLp~~~te~~l~~~F~~-~G~i~~~~~i---~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a 76 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSA-FGVILQTPKI---MRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYA 76 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHT-TSCBSSCCEE---CCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEES
T ss_pred CEEcCCCCcCcHHHHHHHHHH-hCceeeeEEE---EeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEe
Confidence 799999999999999999999 9998664 33 334678999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 039336 159 RNPAA 163 (167)
Q Consensus 159 ~~~~~ 163 (167)
.++..
T Consensus 77 ~~k~~ 81 (83)
T d1x5ta1 77 FKKDS 81 (83)
T ss_dssp CCCCC
T ss_pred cCCCc
Confidence 87654
No 20
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1.9e-22 Score=132.25 Aligned_cols=83 Identities=24% Similarity=0.330 Sum_probs=74.3
Q ss_pred CCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeee
Q 039336 74 GNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPM 153 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l 153 (167)
....++|||+|||+.+++++|+++|++ ||.|..++++.+ .+.++|||||+|.+.++|.+|+..|||..|.|+.|
T Consensus 8 ~~~~~~l~v~nLp~~~t~~~L~~~F~~-~G~v~~v~~~~~-----~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l 81 (93)
T d2cq3a1 8 KSTPKRLHVSNIPFRFRDPDLRQMFGQ-FGKILDVEIIFN-----ERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 81 (93)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHGGG-TSCEEEEEEECC-----TTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEEC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhh-cceeeecccccc-----ccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEE
Confidence 344578999999999999999999999 999998875432 44579999999999999999999999999999999
Q ss_pred EEEeecCCC
Q 039336 154 IIQFGRNPA 162 (167)
Q Consensus 154 ~v~~a~~~~ 162 (167)
+|++|+++.
T Consensus 82 ~V~~A~~r~ 90 (93)
T d2cq3a1 82 EVNNATARV 90 (93)
T ss_dssp EEEECCSSC
T ss_pred EEEecCcCC
Confidence 999998865
No 21
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.5e-23 Score=134.38 Aligned_cols=81 Identities=22% Similarity=0.309 Sum_probs=74.7
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQF 157 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~ 157 (167)
.+|||+|||+.+|+++|+.+|++ ||.|..++++. +..+|.++|||||+|.++++|..|+..|||..|.|++|.|.+
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~-~G~v~~v~i~~---d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~ 77 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTS-FGPLKAFNLVK---DSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQR 77 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTS-SSCEEEEEEEC---CCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHh-cCccceEEeec---cccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 46999999999999999999999 99999988753 367899999999999999999999999999999999999999
Q ss_pred ecCCC
Q 039336 158 GRNPA 162 (167)
Q Consensus 158 a~~~~ 162 (167)
|....
T Consensus 78 A~~~~ 82 (85)
T d2u2fa_ 78 ASVGA 82 (85)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 98654
No 22
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=7.2e-23 Score=132.14 Aligned_cols=78 Identities=24% Similarity=0.423 Sum_probs=71.4
Q ss_pred CCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCC--eeeE
Q 039336 77 ASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKG--KPMI 154 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~g--r~l~ 154 (167)
+++|||+|||+.+|+++|+.+|++ ||.|.+++++. ...+|.++|||||+|.+.++|..|++.|||..+.| ++|.
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~-~G~v~~v~i~~---d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~ 81 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQ-YGRIITSRILV---DQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPIT 81 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGG-GSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHH-hCCcccccccc---ccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEE
Confidence 477999999999999999999999 99999998753 36689999999999999999999999999999987 5699
Q ss_pred EEee
Q 039336 155 IQFG 158 (167)
Q Consensus 155 v~~a 158 (167)
|.||
T Consensus 82 V~~A 85 (85)
T d1fxla2 82 VKFA 85 (85)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9987
No 23
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88 E-value=5.2e-23 Score=132.68 Aligned_cols=81 Identities=21% Similarity=0.308 Sum_probs=70.6
Q ss_pred EEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeec
Q 039336 80 LYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFGR 159 (167)
Q Consensus 80 lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~a~ 159 (167)
|||+|||+++|+++|+.+|++ ||.|.+++++.+-.....+.++|||||+|.+.++|.+|+..|||..|+|++|+|+||+
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~-~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~ 79 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSK-VGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISE 79 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHT-TSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSS
T ss_pred CEEcCCCCCCCHHHHHHHHHH-hCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 799999999999999999999 9999999876442111223579999999999999999999999999999999999996
Q ss_pred CC
Q 039336 160 NP 161 (167)
Q Consensus 160 ~~ 161 (167)
..
T Consensus 80 ~~ 81 (85)
T d2cpfa1 80 RA 81 (85)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 24
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.4e-22 Score=132.13 Aligned_cols=84 Identities=17% Similarity=0.245 Sum_probs=74.5
Q ss_pred CCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeee
Q 039336 74 GNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPM 153 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l 153 (167)
....++|||+|||+++|+++|+.+|++ ||.|..++++.+ ..+|+++|||||+|.+.++|.+||.. +..|.|+.|
T Consensus 5 ~~~~~~lfV~nLp~~~te~~l~~~F~~-~G~i~~v~i~~d---~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i 78 (90)
T d2cqga1 5 VQKTSDLIVLGLPWKTTEQDLKEYFST-FGEVLMVQVKKD---LKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWC 78 (90)
T ss_dssp CCCCCCEEEESCCSSCCHHHHHHHHGG-GSCEEEEEEEEC---SSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEE
T ss_pred CcCCCeEEEECCCCCCCHHHHHHHHHh-hcccceeeeccC---CCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEe
Confidence 345678999999999999999999999 999999987643 67899999999999999999999974 458999999
Q ss_pred EEEeecCCCC
Q 039336 154 IIQFGRNPAA 163 (167)
Q Consensus 154 ~v~~a~~~~~ 163 (167)
.|.+|.++..
T Consensus 79 ~v~~a~~k~~ 88 (90)
T d2cqga1 79 DCKLPNSKQS 88 (90)
T ss_dssp EEECCCTTCC
T ss_pred EEEeCCCCCC
Confidence 9999988754
No 25
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88 E-value=1.3e-22 Score=133.95 Aligned_cols=87 Identities=18% Similarity=0.313 Sum_probs=76.8
Q ss_pred CCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhC------Cce
Q 039336 74 GNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVN------GYV 147 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~------g~~ 147 (167)
...+++|||+|||+.+|+++|+.+|++ ||.|..+.++ ....++.++|||||+|.+.++|.+|+..|| |..
T Consensus 5 ~~~~~tlfV~nLp~~~te~~l~~~f~~-~G~v~~~~~~---~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~ 80 (98)
T d1x4ha1 5 VTEGKTVFIRNLSFDSEEEALGEVLQQ-FGDLKYVRVV---LHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLK 80 (98)
T ss_dssp CCCCCCEEEESCCTTCCHHHHHHHHHT-TSCEEEEECC---BCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEE
T ss_pred CCCCCEEEEcCCCCcCCHHHHHHHHhc-cccceeeeec---cccccccccceEEEEEcCHHHHHHHHHHcccccccCCcE
Confidence 345789999999999999999999999 9999887754 335678899999999999999999999886 677
Q ss_pred eCCeeeEEEeecCCCCC
Q 039336 148 FKGKPMIIQFGRNPAAA 164 (167)
Q Consensus 148 l~gr~l~v~~a~~~~~~ 164 (167)
+.||+|+|++|+++.++
T Consensus 81 ~~gr~l~v~~a~~k~~a 97 (98)
T d1x4ha1 81 LDGRQLKVDLAVTRDEA 97 (98)
T ss_dssp SSSCEEEEECCCCCCCC
T ss_pred ECCEEEEEEECCCCCcC
Confidence 89999999999988754
No 26
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=2e-23 Score=139.50 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=75.5
Q ss_pred CCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEE
Q 039336 77 ASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQ 156 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~ 156 (167)
.++|||+|||+++++++|+.+|++ ||.|..+.++. +..++.++|||||+|.+.++|.+|| .++|..|.|+.|.|.
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~-~G~i~~~~i~~---d~~~~~~kg~aFV~f~~~~~a~~al-~~~~~~l~G~~i~V~ 94 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMR---DPASKRSRGFGFVTFSSMAEVDAAM-AARPHSIDGRVVEPK 94 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTS-SCCCSEEEEEC---CTTTSSCCSEEEEECSSHHHHHHHH-TSCSEEETTEEEEEE
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHh-hCcccceeecc---cccCCCccCeEEEEECCHHHHHHHH-HhCCCeECCEEEEEE
Confidence 378999999999999999999999 99999988653 3668899999999999999999999 689999999999999
Q ss_pred eecCCCCC
Q 039336 157 FGRNPAAA 164 (167)
Q Consensus 157 ~a~~~~~~ 164 (167)
+|+++.++
T Consensus 95 ~a~~ke~~ 102 (103)
T d1x4ba1 95 RAVAREES 102 (103)
T ss_dssp CCSSCCCC
T ss_pred ECcccCCC
Confidence 99987654
No 27
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=5.5e-23 Score=133.78 Aligned_cols=80 Identities=26% Similarity=0.441 Sum_probs=72.7
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQF 157 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~ 157 (167)
.+|||+|||+.+++++|+.+|++ ||.|..++++.+ .+.++|||||+|.+.++|++|++.|||..|+|++|.|++
T Consensus 9 ~~l~V~nLp~~~t~~~l~~~F~~-~G~v~~~~i~~~-----~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~ 82 (89)
T d1cvja2 9 GNIFIKNLDKSIDNKALYDTFSA-FGNILSCKVVCD-----ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR 82 (89)
T ss_dssp TEEEEESCCSSCCHHHHHHHHHT-TSCEEEEEECCB-----TTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHh-cCCceEEEEEee-----cCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 57999999999999999999999 999998886432 455789999999999999999999999999999999999
Q ss_pred ecCCCC
Q 039336 158 GRNPAA 163 (167)
Q Consensus 158 a~~~~~ 163 (167)
|+++.+
T Consensus 83 a~~~~~ 88 (89)
T d1cvja2 83 FKSRKE 88 (89)
T ss_dssp CCCTTT
T ss_pred CCCCCC
Confidence 998764
No 28
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.88 E-value=1.1e-22 Score=131.16 Aligned_cols=79 Identities=30% Similarity=0.497 Sum_probs=72.2
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCC--eee
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKG--KPM 153 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~g--r~l 153 (167)
.+++|||+|||+++++++|+.+|++ ||.|..++++. ...+|+++|||||+|.+.++|..|++.|||..+.| ++|
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~-~G~i~~~~~~~---d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l 80 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGK-YGSIVQKNILR---DKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPL 80 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTS-SSCEEEEEEEE---CTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHh-hCCEeeeeeec---ccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEE
Confidence 3567999999999999999999999 99999988653 36789999999999999999999999999999876 899
Q ss_pred EEEee
Q 039336 154 IIQFG 158 (167)
Q Consensus 154 ~v~~a 158 (167)
+|.||
T Consensus 81 ~V~~A 85 (85)
T d1b7fa2 81 SVRLA 85 (85)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99997
No 29
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.8e-22 Score=129.99 Aligned_cols=79 Identities=20% Similarity=0.270 Sum_probs=72.2
Q ss_pred CCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEE
Q 039336 77 ASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQ 156 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~ 156 (167)
.++|||+|||+.+|+++|+.+|++ ||.|..++++ .+..+|.++|||||+|.+.++|.+|+. ++|..|.||.|+|.
T Consensus 6 ~~~lfV~nlp~~~te~~l~~~F~~-~G~i~~v~i~---~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~ 80 (84)
T d1l3ka1 6 LRKLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVM---RDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPK 80 (84)
T ss_dssp GGEEEEESCCTTCCHHHHHHHHGG-GSCEEEEEEE---ECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEE
T ss_pred CcEEEEECCCCCCCHHHHHHHHHh-hccccceeec---ccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEE
Confidence 468999999999999999999999 9999998865 346789999999999999999999994 79999999999999
Q ss_pred eecC
Q 039336 157 FGRN 160 (167)
Q Consensus 157 ~a~~ 160 (167)
.|.+
T Consensus 81 ~A~s 84 (84)
T d1l3ka1 81 RAVS 84 (84)
T ss_dssp ECCC
T ss_pred eeeC
Confidence 9865
No 30
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.9e-22 Score=136.72 Aligned_cols=81 Identities=21% Similarity=0.459 Sum_probs=73.4
Q ss_pred CCCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCee
Q 039336 73 AGNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKP 152 (167)
Q Consensus 73 ~~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~ 152 (167)
++..+++|||+|||+.+++++|+.+|++ ||.|.+|++ ..++.++|||||+|.+.++|..|+..|||..|.|++
T Consensus 3 pp~~~r~l~V~nLp~~~te~~l~~~F~~-~G~v~~i~~------~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~ 75 (114)
T d2f9da1 3 PPEVNRILYIRNLPYKITAEEMYDIFGK-YGPIRQIRV------GNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRY 75 (114)
T ss_dssp CTTCCSEEEEESCCTTCCHHHHHHHHHT-TSCEEEEEE------ECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred ccCCCCEEEEECCCCCCCHHHHHHHHhh-cCCeEeecc------cccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEE
Confidence 3456789999999999999999999999 999988764 346788999999999999999999999999999999
Q ss_pred eEEEeecC
Q 039336 153 MIIQFGRN 160 (167)
Q Consensus 153 l~v~~a~~ 160 (167)
|+|.+|..
T Consensus 76 l~V~~a~~ 83 (114)
T d2f9da1 76 LVVLYYNA 83 (114)
T ss_dssp CEEEECCH
T ss_pred EEEEEcCC
Confidence 99999864
No 31
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.88 E-value=6e-23 Score=132.81 Aligned_cols=83 Identities=19% Similarity=0.291 Sum_probs=70.2
Q ss_pred CCCEEEecCCCCCCC-HHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 76 PASVLYIKNLAKDVI-PDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t-~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
.+++|||+|||++++ ++.|+++|++ ||.|..++++. ....+|+++|||||+|.+.++|.+|+ .|||..|.|+.|+
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~-~G~i~~v~i~~--~~~~~~~~kg~afV~f~~~~~a~~Al-~~n~~~~~gr~l~ 78 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEG-FGSIEKINIPA--GQKEHSFNNCCAFMVFENKDSAERAL-QMNRSLLGNREIS 78 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGG-GSCEEEEECCS--CCC---CCCEEEEEEESSHHHHHHHG-GGTTEEETTEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHh-hhhccceeeec--ccCCccccceeeeEEECCHHHHHHHH-hcCCCEECCEEEE
Confidence 467899999999876 5669999999 99999988642 23457899999999999999999999 5999999999999
Q ss_pred EEeecCCC
Q 039336 155 IQFGRNPA 162 (167)
Q Consensus 155 v~~a~~~~ 162 (167)
|++|++++
T Consensus 79 V~~a~~kP 86 (86)
T d2ghpa3 79 VSLADKKP 86 (86)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99998753
No 32
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1e-22 Score=136.08 Aligned_cols=81 Identities=17% Similarity=0.325 Sum_probs=74.7
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQF 157 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~ 157 (167)
++|||+|||+++++++|+++|++ ||.|.+++++ ....+|+++|||||+|.+.++|..|+..|||..|.|++|+|++
T Consensus 9 rtl~V~nLp~~~te~~l~~~f~~-~G~i~~v~i~---~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~ 84 (104)
T d1p1ta_ 9 RSVFVGNIPYEATEEQLKDIFSE-VGPVVSFRLV---YDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDN 84 (104)
T ss_dssp SCEEEESCCTTSCHHHHHHHHHT-TSCCSEEEEE---EETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEE
T ss_pred CEEEEECCCCcCCHHHHHHhhhc-cccccccccc---cccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 67999999999999999999999 9999998865 3367899999999999999999999999999999999999999
Q ss_pred ecCCC
Q 039336 158 GRNPA 162 (167)
Q Consensus 158 a~~~~ 162 (167)
|.++.
T Consensus 85 a~~~~ 89 (104)
T d1p1ta_ 85 AASEK 89 (104)
T ss_dssp TTCTT
T ss_pred CCCCC
Confidence 97653
No 33
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=3.5e-22 Score=133.31 Aligned_cols=82 Identities=23% Similarity=0.305 Sum_probs=73.5
Q ss_pred CCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEE
Q 039336 77 ASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQ 156 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~ 156 (167)
.++|||+|||+.+++++|+++|++ ||.|.+++++.+ ..+|+++|||||+|.+.++|.+||+.+|+ .|.||+|.|.
T Consensus 10 ~~~lfV~nLp~~~te~~l~~~F~~-~G~i~~v~i~~d---~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~ 84 (103)
T d2cqda1 10 FTKIFVGGLPYHTTDASLRKYFEG-FGDIEEAVVITD---RQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVN 84 (103)
T ss_dssp SSEEEEECCCSSCCHHHHHHHHHT-TSCEEEEEESCC---SSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEE
T ss_pred CcEEEEeCCCCcCcHHHHHHHHhh-cccccceecccc---ccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEE
Confidence 467999999999999999999999 999999887533 66899999999999999999999988876 7999999999
Q ss_pred eecCCCC
Q 039336 157 FGRNPAA 163 (167)
Q Consensus 157 ~a~~~~~ 163 (167)
+|..+..
T Consensus 85 ~a~~~~~ 91 (103)
T d2cqda1 85 LAYLGAK 91 (103)
T ss_dssp ESTTTCC
T ss_pred EcCCCCC
Confidence 9976543
No 34
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.87 E-value=4.6e-23 Score=134.75 Aligned_cols=81 Identities=17% Similarity=0.194 Sum_probs=73.2
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
...++|||+|||+.+++++|+.+|++ ||.|..+.++ ...+|+++|||||+|.+.++|++|| .|||..|+|++|+
T Consensus 11 ~~~~~ifV~nL~~~~te~~l~~~F~~-~G~i~~~~v~----~~~~g~~kg~afv~F~~~e~a~~Al-~~~g~~~~g~~i~ 84 (91)
T d1fjeb1 11 TTPFNLFIGNLNPNKSVAELKVAISE-LFAKNDLAVV----DVRTGTNRKFGYVDFESAEDLEKAL-ELTGLKVFGNEIK 84 (91)
T ss_dssp SSSEEEEEECCCTTSCHHHHHHHHHH-HHHHHTCCCC----EEEEETTTTEEEEEESSHHHHHHHH-HGGGEEETTEEEE
T ss_pred CCCcEEEEeCccCcchHHHHHHHHhc-CCcEEEeeee----ecCCCCccEEeEEeeCCHHHHHHHH-hcCCcEECCEEEE
Confidence 34578999999999999999999999 9999887642 3568899999999999999999999 5999999999999
Q ss_pred EEeecCC
Q 039336 155 IQFGRNP 161 (167)
Q Consensus 155 v~~a~~~ 161 (167)
|.+|+++
T Consensus 85 V~~ak~k 91 (91)
T d1fjeb1 85 LEKPKGR 91 (91)
T ss_dssp EECCCCS
T ss_pred EEecCCC
Confidence 9999875
No 35
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=5.1e-23 Score=130.53 Aligned_cols=76 Identities=20% Similarity=0.236 Sum_probs=70.3
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQF 157 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~ 157 (167)
|+|||+|||+++|+++|+++|++ ||.|..++++. +..+|++||||||+|.+.++|++|+. +++..++||.|.|..
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~-~G~i~~v~i~~---d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~ 75 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQ-FGEVKECLVMR---DPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKV 75 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTT-TSCCCCEEEEC---CCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEE
T ss_pred CEEEEeCCCCcCCHHHHHHHHHH-hCCcceeeeec---ccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEE
Confidence 67999999999999999999999 99999988753 36789999999999999999999995 799999999999998
Q ss_pred e
Q 039336 158 G 158 (167)
Q Consensus 158 a 158 (167)
|
T Consensus 76 A 76 (77)
T d1uawa_ 76 A 76 (77)
T ss_dssp C
T ss_pred C
Confidence 7
No 36
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=6.7e-22 Score=130.04 Aligned_cols=83 Identities=27% Similarity=0.374 Sum_probs=74.1
Q ss_pred CCCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCee
Q 039336 73 AGNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKP 152 (167)
Q Consensus 73 ~~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~ 152 (167)
...++++|||+|||+.+++++|+++|++ ||.|..+.+ ..++.++|||||+|.+.++|..||..|||..|.|++
T Consensus 10 ~~~~~~~l~V~nLp~~~t~~~l~~~F~~-~G~v~~~~~------~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~ 82 (95)
T d1x4aa1 10 AGNNDCRIYVGNLPPDIRTKDIEDVFYK-YGAIRDIDL------KNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYR 82 (95)
T ss_dssp CCCCSSEEEEESCCTTCCHHHHHHHHGG-GSCEEEEEE------CCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHhc-CCceEEEEe------cccccccceEEEEECCHHHHHHHHHHhCCCEECCEE
Confidence 3567789999999999999999999999 999976553 345678999999999999999999999999999999
Q ss_pred eEEEeecCCC
Q 039336 153 MIIQFGRNPA 162 (167)
Q Consensus 153 l~v~~a~~~~ 162 (167)
|+|+||++..
T Consensus 83 l~V~~a~~~r 92 (95)
T d1x4aa1 83 LRVEFPRSGR 92 (95)
T ss_dssp CEEECCCCCC
T ss_pred EEEEeccCCC
Confidence 9999998753
No 37
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=5.2e-22 Score=130.89 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=72.0
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
+++++|||+|||..+++++|+.+|++ ||.|.+++++ ..+|||||+|.+.++|..|+..|||..|+|++|+
T Consensus 16 ~~~~~l~v~nL~~~~te~~L~~~F~~-fG~i~~v~i~---------~~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~ 85 (96)
T d1x4ga1 16 PKNCTVYCGGIASGLTDQLMRQTFSP-FGQIMEIRVF---------PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 85 (96)
T ss_dssp SSCCEEEEECCSSCCCHHHHHHHHHH-HSCEEEEEEE---------TTTTEEEEEESSHHHHHHHHHHHTTCEETTEECE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHH-hCCceEEEEE---------ecceEEEEEECCHHHHHHHHHHhCCCEECCEEEE
Confidence 34678999999999999999999999 9999988754 2489999999999999999999999999999999
Q ss_pred EEeecCCCC
Q 039336 155 IQFGRNPAA 163 (167)
Q Consensus 155 v~~a~~~~~ 163 (167)
|+||+.+..
T Consensus 86 v~~ak~~p~ 94 (96)
T d1x4ga1 86 CYWGKESPD 94 (96)
T ss_dssp EECCCCCCS
T ss_pred EEEcCCCCC
Confidence 999987653
No 38
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=9e-22 Score=130.55 Aligned_cols=89 Identities=21% Similarity=0.349 Sum_probs=75.1
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeee-----eeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeC
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCG-----LTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFK 149 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~-----~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~ 149 (167)
..+++|||+|||+.+|+++|+++|.+ ||.|..+.+. .......+|+++|||||+|.+.++|.+|+..|||..|+
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~-~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~ 84 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQ-CGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQ 84 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTT-TSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEET
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHH-CceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEEC
Confidence 45689999999999999999999999 9988543221 11223456899999999999999999999999999999
Q ss_pred CeeeEEEeecCCCCC
Q 039336 150 GKPMIIQFGRNPAAA 164 (167)
Q Consensus 150 gr~l~v~~a~~~~~~ 164 (167)
||+|+|++|+++...
T Consensus 85 gr~i~V~~a~~~~p~ 99 (101)
T d2cpea1 85 GSKLKVSLARKKPPM 99 (101)
T ss_dssp TEECEEECSSCCCCS
T ss_pred CEEEEEEEcCCCCCC
Confidence 999999999887543
No 39
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=4.9e-22 Score=128.88 Aligned_cols=79 Identities=22% Similarity=0.274 Sum_probs=70.3
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCcee-CCeee
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVF-KGKPM 153 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l-~gr~l 153 (167)
+|+++|||+|||+++++++|+.+|++ ||.|..+.+ ..++++|||||+|.+.++|.+|+..|||..+ .|++|
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~-~G~v~~~~~-------~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l 79 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSS-NGGVVKGFK-------FFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHL 79 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHT-TSCCEEEEE-------ECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhc-cCCEEEEEE-------eeecccceeEEEECCHHHHHHHHHhccCCEecCCCEE
Confidence 57889999999999999999999999 999866542 1456789999999999999999999999998 58999
Q ss_pred EEEeecCC
Q 039336 154 IIQFGRNP 161 (167)
Q Consensus 154 ~v~~a~~~ 161 (167)
+|+||++.
T Consensus 80 ~v~~sk~~ 87 (88)
T d2adca2 80 RVSFSKST 87 (88)
T ss_dssp EEEECSSC
T ss_pred EEEeCCCC
Confidence 99999864
No 40
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.4e-22 Score=134.80 Aligned_cols=80 Identities=23% Similarity=0.352 Sum_probs=72.9
Q ss_pred CCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEE
Q 039336 77 ASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQ 156 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~ 156 (167)
.++|||+|||+.+++++|+.+|+. ||.|.+++++ ....+|+++|||||+|.+.++|.+|+ .|||..|.|+.|.|.
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~-~G~V~~v~i~---~d~~tg~~kG~afV~F~~~e~a~~A~-~l~g~~~~G~~l~V~ 92 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSA-VGKVRDVRII---SDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQ 92 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTT-TSCEEEEEEC---CSCCSSSCCCCEEEEESCGGGHHHHH-HHTTEEETTEEEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHcC-CCeEEEEEee---ecCCCccccceEEEEECCHHHHHHHH-HHCCCEECCEEEEEE
Confidence 368999999999999999999999 9999998865 33668999999999999999999999 699999999999999
Q ss_pred eecCC
Q 039336 157 FGRNP 161 (167)
Q Consensus 157 ~a~~~ 161 (167)
+|.++
T Consensus 93 ~a~~~ 97 (101)
T d2cq4a1 93 ASQAE 97 (101)
T ss_dssp EHHHH
T ss_pred ECCCC
Confidence 98654
No 41
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=2.2e-22 Score=131.44 Aligned_cols=82 Identities=37% Similarity=0.597 Sum_probs=73.0
Q ss_pred CCCCEEEecCCCCCCCHHHHHH----HHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCC
Q 039336 75 NPASVLYIKNLAKDVIPDDFFF----IFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKG 150 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~----~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~g 150 (167)
+|+++|||+|||+.+++++|++ +|++ ||.|.++++ ..+++++|||||+|.+.++|..|+..|||..+.|
T Consensus 1 ~P~~tl~V~nLp~~~t~~dl~~~l~~~f~~-~G~i~~i~~------~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g 73 (91)
T d1nu4a_ 1 RPNHTIYINNLNEKIKKDELKKSLHAIFSR-FGQILDILV------SRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYD 73 (91)
T ss_dssp CCCSEEEEESCCTTSCHHHHHHHHHHHHGG-GSCEEEEEC------CHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHhcc-cccccceEE------eeeccCCCceEEEECCHHHHHHHHHHhCCCEECC
Confidence 3789999999999999999864 5888 999977653 3467789999999999999999999999999999
Q ss_pred eeeEEEeecCCCC
Q 039336 151 KPMIIQFGRNPAA 163 (167)
Q Consensus 151 r~l~v~~a~~~~~ 163 (167)
++|+|.||+++++
T Consensus 74 ~~l~v~~ak~~~~ 86 (91)
T d1nu4a_ 74 KPMRIQYAKTDSD 86 (91)
T ss_dssp EECEEEECSSCCT
T ss_pred EEEEEEEeCCCch
Confidence 9999999998765
No 42
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.86 E-value=9.6e-22 Score=126.19 Aligned_cols=78 Identities=19% Similarity=0.359 Sum_probs=69.6
Q ss_pred CCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCcee-CCee
Q 039336 74 GNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVF-KGKP 152 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l-~gr~ 152 (167)
.+|+++|||+|||..+++++|..+|++ ||.|..+++. . ..+|||||+|.+.++|..|+..|||..| +|++
T Consensus 5 ~pP~~tl~V~nLp~~~t~~~l~~~f~~-~G~i~~v~~~------~--~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~ 75 (83)
T d2b0ga1 5 QPPNQILFLTNLPEETNEMMLSMLFNQ-FPGFKEVRLV------P--NRHDIAFVEFTTELQSNAAKEALQGFKITPTHA 75 (83)
T ss_dssp CSCCSEEEEESCCTTCCHHHHHHHHTT-STTEEEEEEC------T--TTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCB
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhcc-CccEEEeeee------c--ccceeEEEecCCHHHHHHHHHHhCCcEeCCCcE
Confidence 457899999999999999999999999 9999887743 1 2479999999999999999999999998 5799
Q ss_pred eEEEeecC
Q 039336 153 MIIQFGRN 160 (167)
Q Consensus 153 l~v~~a~~ 160 (167)
|+|+||+.
T Consensus 76 i~v~~akk 83 (83)
T d2b0ga1 76 MKITFAKK 83 (83)
T ss_dssp CEEEECCC
T ss_pred EEEEEecC
Confidence 99999974
No 43
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.3e-21 Score=124.32 Aligned_cols=76 Identities=17% Similarity=0.288 Sum_probs=69.9
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQF 157 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~ 157 (167)
++|||+|||+++|+++|+.+|++ ||.|..+.++ ....++.++|||||+|.+.++|.+|+ .++|..|+||+|+|..
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~-~G~i~~~~~~---~~~~~~~~~g~afV~f~~~e~~~~al-~~~~~~l~Gr~i~V~~ 77 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQ-YGKIEVIEIM---TDRGSGKKRGFAFVTFDDHDSVDKIV-IQKYHTVNGHNCEVRK 77 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTT-TSCEEEEEEE---ECTTTCCEEEEEEEEESSHHHHHHHH-HCSCCEETTEECEEEE
T ss_pred CEEEECCCCCcCCHHHHHHHHHH-hccccccccc---cCCCCcccccEEEEEEcCHHHHHHHH-HhCCCEECCEEEEEEE
Confidence 57999999999999999999999 9999988764 33678999999999999999999999 6899999999999998
Q ss_pred e
Q 039336 158 G 158 (167)
Q Consensus 158 a 158 (167)
|
T Consensus 78 A 78 (79)
T d1l3ka2 78 A 78 (79)
T ss_dssp C
T ss_pred C
Confidence 7
No 44
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.3e-21 Score=130.54 Aligned_cols=87 Identities=17% Similarity=0.279 Sum_probs=73.6
Q ss_pred CCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeee
Q 039336 74 GNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPM 153 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l 153 (167)
..|.++|||+|||+.+++++|+++|++ || +..++++. ....+|+++|||||+|.+.++|++|+ .|||..|.||.|
T Consensus 12 ~~p~~~v~V~nLp~~~te~~l~~~f~~-~g-~~~~~~~~--~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l 86 (104)
T d1wi8a_ 12 KSPPYTAFLGNLPYDVTEESIKEFFRG-LN-ISAVRLPR--EPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRI 86 (104)
T ss_dssp SSSCEEEEEESCCSSCCHHHHHHHTTT-SC-EEEEECCB--CSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEEC
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHHH-hc-cccceeee--eeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEE
Confidence 456789999999999999999999999 99 55655432 22357899999999999999998777 799999999999
Q ss_pred EEEeecCCCCCC
Q 039336 154 IIQFGRNPAAAK 165 (167)
Q Consensus 154 ~v~~a~~~~~~k 165 (167)
+|.+|..+....
T Consensus 87 ~V~~a~~~~~~~ 98 (104)
T d1wi8a_ 87 RVDVADQAQDKD 98 (104)
T ss_dssp EEEECCCCCCCC
T ss_pred EEEECCCCCCCC
Confidence 999998776543
No 45
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=5.7e-22 Score=124.96 Aligned_cols=75 Identities=24% Similarity=0.321 Sum_probs=68.4
Q ss_pred EEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEee
Q 039336 79 VLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFG 158 (167)
Q Consensus 79 ~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~a 158 (167)
+|||+|||+++|+++|+.+|++ ||.|..+.++. ...+|+++|||||+|.+.++|++||. +++..|.|+.|.|..|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~-~G~i~~~~i~~---d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSK-FGEVVDCTLKL---DPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHT-TSCEEEEECCC---BTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHh-hcccccccccc---CCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 4899999999999999999999 99999988753 36789999999999999999999995 8999999999998754
No 46
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.85 E-value=9.1e-22 Score=129.62 Aligned_cols=82 Identities=22% Similarity=0.341 Sum_probs=73.6
Q ss_pred CCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeee
Q 039336 74 GNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPM 153 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l 153 (167)
..++++|||+|||+.+|+++|+.+|++ ||.|..++ .+|.++|||||+|.+.++|.+|+..|||..|.|++|
T Consensus 13 ~~~~~~l~V~nL~~~~te~~l~~~F~~-~g~v~~~~--------~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i 83 (96)
T d1fjca_ 13 VRAARTLLAKNLSFNITEDELKEVFED-ALEIRLVS--------QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSV 83 (96)
T ss_dssp TTGGGEEEEESCCSSCCHHHHHHHHCS-EEEECCEE--------ETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHh-cccceeee--------ecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEE
Confidence 345689999999999999999999999 99885432 377899999999999999999999999999999999
Q ss_pred EEEeecCCCCC
Q 039336 154 IIQFGRNPAAA 164 (167)
Q Consensus 154 ~v~~a~~~~~~ 164 (167)
+|.||.++...
T Consensus 84 ~V~~a~~k~~~ 94 (96)
T d1fjca_ 84 SLYYTGEKGGT 94 (96)
T ss_dssp EEEECSSSCCC
T ss_pred EEEEeCCCCCC
Confidence 99999988754
No 47
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.1e-21 Score=129.11 Aligned_cols=86 Identities=14% Similarity=0.138 Sum_probs=72.6
Q ss_pred CCEEEecCCCCCCCHHHHHHHHhhccCC-eeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCC--ceeCCeee
Q 039336 77 ASVLYIKNLAKDVIPDDFFFIFGSLFGS-IDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNG--YVFKGKPM 153 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L~~~F~~~~G~-i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g--~~l~gr~l 153 (167)
+|+|||+|||..+++++|+.+|++ ||. |..++++.+ ...+|+++|||||+|.+.++|..|++.|++ ..+.|++|
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~-~g~~i~~v~~~~~--~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i 77 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAK-VTEGVLDVIVYAS--AADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQI 77 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHH-HSTTEEEEECCSS--SCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCC
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHH-hCCcceEEEEeee--ccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEE
Confidence 478999999999999999999999 995 777775422 124689999999999999999999999975 44689999
Q ss_pred EEEeecCCCCCC
Q 039336 154 IIQFGRNPAAAK 165 (167)
Q Consensus 154 ~v~~a~~~~~~k 165 (167)
+|+||+++.+..
T Consensus 78 ~V~~A~p~~~~~ 89 (96)
T d2disa1 78 AVDWAEPEIDVD 89 (96)
T ss_dssp EEEESCSSCSTT
T ss_pred EEEEcCCCCCCC
Confidence 999998776543
No 48
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=1.1e-21 Score=123.29 Aligned_cols=75 Identities=21% Similarity=0.292 Sum_probs=68.7
Q ss_pred EEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEee
Q 039336 79 VLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFG 158 (167)
Q Consensus 79 ~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~a 158 (167)
+|||+|||+++|+++|+++|++ ||.|..+.++ ....+|.++|||||+|.+.++|.+|++ +||..|.||+|+|.+|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~-~G~i~~~~~~---~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQ-FGKVDDAMLM---FDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHT-TSCCSEECCB---CCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHH-hCCcceeeee---eeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 4999999999999999999999 9999887754 336679999999999999999999995 9999999999999986
No 49
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.1e-21 Score=125.07 Aligned_cols=76 Identities=30% Similarity=0.409 Sum_probs=67.7
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCc-eeCCeeeEEE
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGY-VFKGKPMIIQ 156 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~-~l~gr~l~v~ 156 (167)
++|||+|||+++|+++|+.+|++ ||.+..+.+. .++|||||+|.+.++|.+|++.|||. .+.|++|+|+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~-~G~i~~~~~~---------~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~ 71 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGD-RKLPLAGQVL---------LKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVD 71 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHH-TTCCCSSCEE---------EETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHH-hCcEEEeEEe---------cccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEE
Confidence 36999999999999999999999 9998665532 36899999999999999999999996 5999999999
Q ss_pred eecCCCC
Q 039336 157 FGRNPAA 163 (167)
Q Consensus 157 ~a~~~~~ 163 (167)
||.++..
T Consensus 72 ~a~~k~~ 78 (80)
T d2cqha1 72 YSVSKKL 78 (80)
T ss_dssp ECCCCCC
T ss_pred EcCCcCc
Confidence 9997653
No 50
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.9e-21 Score=125.53 Aligned_cols=77 Identities=23% Similarity=0.384 Sum_probs=69.2
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
..++|||+|||+.+++++|+.+|++ ||.+..+.+ ++++|||||+|.+.++|.+|+..|||..|.|+.|+|
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~-~g~i~~~~~---------~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V 76 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNN-IKPGAVERV---------KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEV 76 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHT-TSTTCEEEE---------EECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEE
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcc-cceeeeEEE---------ccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEE
Confidence 3478999999999999999999999 999865542 357899999999999999999999999999999999
Q ss_pred EeecCCC
Q 039336 156 QFGRNPA 162 (167)
Q Consensus 156 ~~a~~~~ 162 (167)
+||+++.
T Consensus 77 ~~akP~~ 83 (86)
T d2cpda1 77 TLAKPVD 83 (86)
T ss_dssp ECCCCCC
T ss_pred EeccCCC
Confidence 9998654
No 51
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=2.4e-21 Score=130.53 Aligned_cols=77 Identities=19% Similarity=0.232 Sum_probs=69.9
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
.+++|||+|||+.+++++|+.+|++ ||.|..+.+ ..++|||||+|.+.++|.+||+.|||..|.|++|+|
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~-fG~I~~v~l---------~~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v 78 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSR-FGSLGRVLL---------PEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYL 78 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHT-TSCEEEEEC---------CSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhc-cCCccEEEe---------eccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEE
Confidence 4578999999999999999999999 999987663 246899999999999999999999999999999999
Q ss_pred EeecCCC
Q 039336 156 QFGRNPA 162 (167)
Q Consensus 156 ~~a~~~~ 162 (167)
+||....
T Consensus 79 ~~a~~~~ 85 (111)
T d1whxa_ 79 EWAPIGV 85 (111)
T ss_dssp EEEETTT
T ss_pred EECCCCc
Confidence 9997654
No 52
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.7e-21 Score=129.48 Aligned_cols=80 Identities=21% Similarity=0.284 Sum_probs=71.8
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
..++|||+|||+++++++|+.+|++ ||.|..+.+. ...++.++|||||+|.+.++|.+|+..|||..|.||++.|
T Consensus 17 ~~~~lfV~nLp~~~te~~L~~~F~~-~G~i~~~~~~----~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v 91 (101)
T d1x5oa1 17 DPTNLYISNLPLSMDEQELENMLKP-FGQVISTRIL----RDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVS 91 (101)
T ss_dssp CTTEEEEESCCTTCCHHHHHHTTTT-TSCEEEEEEE----ECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhh-cccccceeee----cccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCcc
Confidence 4578999999999999999999999 9999877643 3467899999999999999999999999999999999988
Q ss_pred EeecC
Q 039336 156 QFGRN 160 (167)
Q Consensus 156 ~~a~~ 160 (167)
.++++
T Consensus 92 ~~~~P 96 (101)
T d1x5oa1 92 APTEP 96 (101)
T ss_dssp CCSSC
T ss_pred CCCCC
Confidence 77654
No 53
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=3.6e-21 Score=122.35 Aligned_cols=76 Identities=24% Similarity=0.339 Sum_probs=68.7
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
..+++|||+||+ +|+++|+++|++ ||.|..+++. +.+|||||+|.+.++|..|+..|||..+.|++|+
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~-~G~I~~v~~~---------~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~ 70 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSP-FGNIIDLSMD---------PPRNCAFVTYEKMESADQAVAELNGTQVESVQLK 70 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHST-TCCCSCEEEE---------TTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCE
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhc-cCccceeeec---------cCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEE
Confidence 457899999996 899999999999 9999887642 4689999999999999999999999999999999
Q ss_pred EEeecCCC
Q 039336 155 IQFGRNPA 162 (167)
Q Consensus 155 v~~a~~~~ 162 (167)
|+||+.++
T Consensus 71 V~~a~~~P 78 (79)
T d2bz2a1 71 VNIARKQP 78 (79)
T ss_dssp EEECCSSC
T ss_pred EEEecCCC
Confidence 99998654
No 54
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=9.2e-22 Score=124.03 Aligned_cols=75 Identities=17% Similarity=0.287 Sum_probs=68.3
Q ss_pred EEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEee
Q 039336 79 VLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFG 158 (167)
Q Consensus 79 ~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~a 158 (167)
.|||+|||+++|+++|+.+|++ ||.|..++++.+ ..+|+++|||||+|.+.++|++|| ..++..|+|+.|.|..|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~-~G~I~~v~i~~d---~~t~~~rG~~FV~f~~~~~a~~al-~~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGG-FGEVESIELPMD---NKTNKRRGFCFITFKEEEPVKKIM-EKKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHH-HSCEEEEECCCC---TTTCCTTCCEEEEESSSHHHHHHT-TCSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHH-hCCccccccccc---ccccccccEEEEEECCHHHHHHHH-hhCCCEECCEEeEEEEC
Confidence 4999999999999999999999 999999987543 678999999999999999999999 55778899999999876
No 55
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=2.9e-21 Score=124.76 Aligned_cols=77 Identities=21% Similarity=0.383 Sum_probs=70.5
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
+.++|||+|||+.+++++|+.+|++ ||.|.++++. +.+|||||+|.+.++|.+|+..|||..|.|++|+|
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~-~G~i~~i~~~---------~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V 76 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEK-YGKAGEVFIH---------KDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 76 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTST-TCCCSEEEEE---------TTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHH-hCCceEeeee---------cccceEEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 3468999999999999999999999 9999887743 35899999999999999999999999999999999
Q ss_pred EeecCCC
Q 039336 156 QFGRNPA 162 (167)
Q Consensus 156 ~~a~~~~ 162 (167)
+||....
T Consensus 77 ~~A~~~~ 83 (86)
T d2cpja1 77 RFACHSA 83 (86)
T ss_dssp EESSCCS
T ss_pred EECCCcC
Confidence 9998765
No 56
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.1e-21 Score=128.99 Aligned_cols=77 Identities=29% Similarity=0.535 Sum_probs=68.7
Q ss_pred CCEEEecCCCC-CCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 77 ASVLYIKNLAK-DVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 77 ~~~lfV~nLp~-~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
+++|||+|||+ .+|+++|+.+|++ ||.|..++++.+ .+|||||+|.+.++|.+|++.|||..|.|+.|+|
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~-fG~I~~v~i~~~--------~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v 72 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGV-YGDVQRVKILFN--------KKENALVQMADGNQAQLAMSHLNGHKLHGKPIRI 72 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHH-HTCEEEEEECCT--------TSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEE
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhh-ccccceEEEEec--------ccceEEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 57899999965 5999999999999 999998875421 4899999999999999999999999999999999
Q ss_pred EeecCCC
Q 039336 156 QFGRNPA 162 (167)
Q Consensus 156 ~~a~~~~ 162 (167)
+||+...
T Consensus 73 ~~s~~~~ 79 (109)
T d2adca1 73 TLSKHQN 79 (109)
T ss_dssp ECCSCCC
T ss_pred EECCCCC
Confidence 9997553
No 57
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=7.4e-21 Score=122.57 Aligned_cols=77 Identities=23% Similarity=0.353 Sum_probs=70.0
Q ss_pred CCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEE
Q 039336 77 ASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQ 156 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~ 156 (167)
.++|||+|||+++|+++|+.+|+. ||.|..+++ ....+|+++|||||+|.+.++|.+|| .++|..+.|+.|.|.
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~-~G~v~~v~l----~~~~~~~~kG~afV~f~~~e~a~~al-~~~~~~~~g~~l~v~ 79 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLED-KGQVLNIQM----RRTLHKAFKGSIFVVFDSIESAKKFV-ETPGQKYKETDLLIL 79 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTT-SCCEEEEEE----EECTTCCEEEEEEEEESCHHHHHHHH-TCCCCEETTEECEEE
T ss_pred cCEEEEECCCCCCCHHHHHHHHHH-hccccccee----eeeccCCcceEEEEEEcCHHHHHHHH-HHCCCEECCEEEEEE
Confidence 468999999999999999999999 999988874 33568999999999999999999999 689999999999999
Q ss_pred eec
Q 039336 157 FGR 159 (167)
Q Consensus 157 ~a~ 159 (167)
++.
T Consensus 80 ~~~ 82 (85)
T d1zh5a2 80 FKD 82 (85)
T ss_dssp EGG
T ss_pred EcC
Confidence 864
No 58
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.2e-20 Score=122.16 Aligned_cols=81 Identities=22% Similarity=0.343 Sum_probs=71.7
Q ss_pred CCCCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHh--CCceeC
Q 039336 72 AAGNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLV--NGYVFK 149 (167)
Q Consensus 72 ~~~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l--~g~~l~ 149 (167)
..+.|+++|||+|||+.+++++|+.+|++ ||.|..+++. +.+|||||+|.+.++|.+|+..+ ++..+.
T Consensus 3 ~~~~Ps~~l~V~nLp~~~t~~~L~~~f~~-~G~i~~v~~~---------~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~ 72 (88)
T d2cq1a1 3 MDGAPSRVLHIRKLPGEVTETEVIALGLP-FGKVTNILML---------KGKNQAFLELATEEAAITMVNYYSAVTPHLR 72 (88)
T ss_dssp CCSSCCSEEEEESCCTTCCHHHHHHTTTT-TSCEEEEEEE---------TTTTEEEEEESSHHHHHHHHHHHHHSCCEET
T ss_pred CCCCCCCEEEEeCCCCCCCHHHHHHHHhc-cccccccccc---------ccceEEEEEeCCHHHHHHHHHHHccCCCccC
Confidence 34678999999999999999999999999 9999887632 45799999999999999999866 567899
Q ss_pred CeeeEEEeecCCC
Q 039336 150 GKPMIIQFGRNPA 162 (167)
Q Consensus 150 gr~l~v~~a~~~~ 162 (167)
|++|+|+||+.+.
T Consensus 73 g~~l~v~~sk~~~ 85 (88)
T d2cq1a1 73 NQPIYIQYSNHKE 85 (88)
T ss_dssp TEECEEEECSCSS
T ss_pred CCEEEEEECCCCC
Confidence 9999999998765
No 59
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.5e-21 Score=124.89 Aligned_cols=77 Identities=26% Similarity=0.367 Sum_probs=67.4
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
.+++|||+|||+++++++|+++|.+ ||.. .+. .+.++|||||+|.+.++|++|+..|||..|.|++|+|
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~-~G~~-~~~---------~~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V 72 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKD-YDLK-YCY---------VDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIV 72 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCS-SCCC-CEE---------EEGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCEEEEeCCCCccChHHHHHHHHh-cCce-eee---------eeccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 4578999999999999999999999 9932 222 2457999999999999999999999999999999999
Q ss_pred EeecCCCC
Q 039336 156 QFGRNPAA 163 (167)
Q Consensus 156 ~~a~~~~~ 163 (167)
+|++++..
T Consensus 73 ~~a~~~~~ 80 (88)
T d1wg1a_ 73 QLQPTDAL 80 (88)
T ss_dssp EECCCCCC
T ss_pred EEcCCCCC
Confidence 99987653
No 60
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=5.6e-21 Score=123.22 Aligned_cols=79 Identities=22% Similarity=0.352 Sum_probs=70.5
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
..++|||+|||+++++++|+++|+. ||.+....+ +....+|+++|||||+|.+.++|.+|+..|||..|+||+|+|
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~-~~~~~~~~~---~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v 83 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYG-YQVIPGSVC---LKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKL 83 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTT-SCCCTTTCE---EEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhh-cccceeEEE---EEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEE
Confidence 3467999999999999999999999 999865432 344678999999999999999999999999999999999999
Q ss_pred Eee
Q 039336 156 QFG 158 (167)
Q Consensus 156 ~~a 158 (167)
.+|
T Consensus 84 ~l~ 86 (86)
T d2cqpa1 84 VLG 86 (86)
T ss_dssp EES
T ss_pred EEC
Confidence 986
No 61
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=7.2e-21 Score=119.84 Aligned_cols=72 Identities=21% Similarity=0.340 Sum_probs=64.8
Q ss_pred EEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeec
Q 039336 80 LYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFGR 159 (167)
Q Consensus 80 lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~a~ 159 (167)
|||+|||+++++++|+.+|++ || +..+. .++++|||||+|.+.++|.+|+..|||..+.|++|+|+||+
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~-~g-~~~~~---------~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~ 69 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSD-YE-LKYCF---------VDKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQP 69 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTT-SC-EEEEE---------EETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECC
T ss_pred CEEeCCCCcCCHHHHHHHHhc-cc-cccee---------ecccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeC
Confidence 799999999999999999999 99 33222 34689999999999999999999999999999999999998
Q ss_pred CCC
Q 039336 160 NPA 162 (167)
Q Consensus 160 ~~~ 162 (167)
+++
T Consensus 70 ~d~ 72 (75)
T d1wi6a1 70 TDA 72 (75)
T ss_dssp STT
T ss_pred CCC
Confidence 764
No 62
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=8.7e-21 Score=125.37 Aligned_cols=79 Identities=25% Similarity=0.349 Sum_probs=69.5
Q ss_pred CCCCCCEEEecCCC-CCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCe
Q 039336 73 AGNPASVLYIKNLA-KDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGK 151 (167)
Q Consensus 73 ~~~~~~~lfV~nLp-~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr 151 (167)
+...+++|||+||| ..+++++|+.+|++ ||.|..+++ ++|||||+|.+.++|.+||..|||..|.|+
T Consensus 11 ~~~~~~~lfV~nL~~~~~~~~~L~~~F~~-~G~i~~~~i-----------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~ 78 (98)
T d1wf2a_ 11 PRSMNSRVFIGNLNTLVVKKSDVEAIFSK-YGKIVGCSV-----------HKGFAFVQYVNERNARAAVAGEDGRMIAGQ 78 (98)
T ss_dssp CSSCCCCEEEEEECTTTCCHHHHHHSSTT-SSCEEEEEE-----------ETEEEEEEESSHHHHHHHHHTTTTCEETTE
T ss_pred CCCCCcEEEEeCCCcccCCHHHHHHHHhh-cCCEEEEEE-----------eCCeEEEEECCHHHHHHHHHHcCCCEECCE
Confidence 34456789999997 56888999999999 999987763 489999999999999999999999999999
Q ss_pred eeEEEeecCCCC
Q 039336 152 PMIIQFGRNPAA 163 (167)
Q Consensus 152 ~l~v~~a~~~~~ 163 (167)
+|+|+||+.+..
T Consensus 79 ~l~V~~a~~~~~ 90 (98)
T d1wf2a_ 79 VLDINLAAEPKV 90 (98)
T ss_dssp ECEEEETTSCCC
T ss_pred EEEEEECCCCCC
Confidence 999999986543
No 63
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=3.5e-21 Score=125.13 Aligned_cols=79 Identities=22% Similarity=0.328 Sum_probs=67.1
Q ss_pred CCEEEecCCCCCCCHHHH---HHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeee
Q 039336 77 ASVLYIKNLAKDVIPDDF---FFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPM 153 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L---~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l 153 (167)
.++|||+|||+.+++++| .++|++ ||.|..+.++.+-.....+..+|||||+|.+.++|.+|++.|||..|.||+|
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~-~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGK-FGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTT-TSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcc-cCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 456999999999999999 668999 9999998875442222234456999999999999999999999999999999
Q ss_pred EEE
Q 039336 154 IIQ 156 (167)
Q Consensus 154 ~v~ 156 (167)
+|+
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 985
No 64
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=2.3e-20 Score=123.02 Aligned_cols=81 Identities=20% Similarity=0.391 Sum_probs=71.8
Q ss_pred CCCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCC--
Q 039336 73 AGNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKG-- 150 (167)
Q Consensus 73 ~~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~g-- 150 (167)
...|+++|||+|||+.+++++|+++|++ ||.|..+++. +.++||||+|.+.++|..|+..|||..|.|
T Consensus 13 ~~~Ps~tl~V~nLp~~~t~~~l~~~f~~-~G~i~~~~~~---------~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~ 82 (97)
T d1whya_ 13 KANPTTRLWVGGLGPNTSLAALAREFDR-FGSIRTIDHV---------KGDSFAYIQYESLDAAQAACAKMRGFPLGGPD 82 (97)
T ss_dssp CCCCCSCEEEECCCSSCCHHHHHHHHHT-TSCEEEEEEC---------SSSCCEEEEESSHHHHHHHHHHHTTCBCSSSS
T ss_pred CCCCCCEEEEcCCCCCCCHHHHHHHHHh-hcccceEeee---------ccccEEEeccCCHHHHHHHHHHhCCCEeCCCc
Confidence 3457899999999999999999999999 9999877642 358999999999999999999999999976
Q ss_pred eeeEEEeecCCCC
Q 039336 151 KPMIIQFGRNPAA 163 (167)
Q Consensus 151 r~l~v~~a~~~~~ 163 (167)
++|+|+||++.+.
T Consensus 83 ~~l~v~~ak~~~~ 95 (97)
T d1whya_ 83 RRLRVDFAKSGPS 95 (97)
T ss_dssp CBCEEEECCCCCC
T ss_pred eEEEEEeCCCCCC
Confidence 5899999997654
No 65
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=6.4e-20 Score=122.34 Aligned_cols=86 Identities=16% Similarity=0.305 Sum_probs=73.8
Q ss_pred CCCCCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHh--CCcee
Q 039336 71 YAAGNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLV--NGYVF 148 (167)
Q Consensus 71 ~~~~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l--~g~~l 148 (167)
.....|+++|||+|||+.+++++|..+|++ ||.|..+++. +.+|||||+|.+.++|..|+..| ++..+
T Consensus 9 ~~~~~ps~~l~v~nlp~~~te~~l~~~F~~-fG~I~~~~~~---------~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~ 78 (104)
T d1wexa_ 9 HHKVSVSPVVHVRGLCESVVEADLVEALEK-FGTICYVMMM---------PFKRQALVEFENIDSAKECVTFAADVPVYI 78 (104)
T ss_dssp CCCCCCCSEEEEESCCSSCCHHHHHHHHTT-TSCEEEEEEE---------TTTTEEEEEESSHHHHHHHHHHHHHSCCBS
T ss_pred CCcCCCCCEEEEeCCCCCCCHHHHHHhhhh-cccceEEEEE---------ecceeEEEEeCCHHHHHHHHHHHcCCCcEE
Confidence 344568899999999999999999999999 9999877642 46899999999999999999988 55678
Q ss_pred CCeeeEEEeecCCCCCCC
Q 039336 149 KGKPMIIQFGRNPAAAKP 166 (167)
Q Consensus 149 ~gr~l~v~~a~~~~~~k~ 166 (167)
.|++|+|+||+.+...++
T Consensus 79 ~g~~l~v~~s~~~~~~~~ 96 (104)
T d1wexa_ 79 AGQQAFFNYSTSKRITRP 96 (104)
T ss_dssp SSSBCEEEECSSSSCCCS
T ss_pred eeEEEEEEEcCCCccCCC
Confidence 999999999987655443
No 66
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.2e-20 Score=125.43 Aligned_cols=81 Identities=20% Similarity=0.197 Sum_probs=70.9
Q ss_pred CCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCcee--CCe
Q 039336 74 GNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVF--KGK 151 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l--~gr 151 (167)
..+..+|||+|||+.+|+++|+++|++ ||.|..+.+.. .+++|||||+|.+.++|.+|+..|||..| .|+
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~-~G~i~~~~i~~-------~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~ 75 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSK-FGTVLKIITFT-------KNNQFQALLQYADPVSAQHAKLSLDGQNIYNACC 75 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTT-TSCEEEEEEEE-------ETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCC
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHcc-CCcEEEEEEEe-------eCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCc
Confidence 345678999999999999999999999 99998887542 24689999999999999999999999998 588
Q ss_pred eeEEEeecCCC
Q 039336 152 PMIIQFGRNPA 162 (167)
Q Consensus 152 ~l~v~~a~~~~ 162 (167)
.|+|.|++.+.
T Consensus 76 ~l~v~~s~~~~ 86 (108)
T d2adba1 76 TLRIDFSKLTS 86 (108)
T ss_dssp CCEEEECSSCS
T ss_pred EEEEEecCCcc
Confidence 99999997654
No 67
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.3e-20 Score=122.09 Aligned_cols=80 Identities=19% Similarity=0.300 Sum_probs=69.7
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
..+++|||+|||+.+|+++|+++|++ ||.|..+++ ...++|||||+|.+.++|++|+. ++..|.|++|.
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~-~G~v~~v~~--------~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~ 71 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQ-YGDVMDVFI--------PKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVH 71 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTT-TSCCCEEEC--------CSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHH-cCCceEEEE--------eeccCceEEEEECCHHHHHHHHh--CCCEECCEEeE
Confidence 35689999999999999999999999 999977653 34578999999999999999984 88899999999
Q ss_pred EEeecCCCCCC
Q 039336 155 IQFGRNPAAAK 165 (167)
Q Consensus 155 v~~a~~~~~~k 165 (167)
|.+|+++....
T Consensus 72 v~~a~~k~~~~ 82 (88)
T d1wf0a_ 72 ISNAEPKHNSN 82 (88)
T ss_dssp EECCCCCCCCC
T ss_pred EEeCCCCCCCC
Confidence 99998776543
No 68
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.82 E-value=4.5e-20 Score=116.10 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=65.5
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQF 157 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~ 157 (167)
++|||+|||+.+++++|+++|++ ||.|..++++. . .+..+|||||+|.+.++|.+|+ .++|..|+|++|.|..
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~-~G~I~~v~~~~----~-~~~~~~~afV~F~~~~~a~~Al-~~~~~~i~g~~i~V~~ 73 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKH-CGPIIHVDVAD----S-LKKNFRFARIEFARYDGALAAI-TKTHKVVGQNEIIVSH 73 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGG-GSCEEEEEEEE----C-TTSSSEEEEEEESSHHHHHHHH-TTTTCEETTEECEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHhc-CCceEEEEEEe----e-ccccceEEEEEEcchHHhHHHH-HhcCcEECCEEEEEEE
Confidence 58999999999999999999999 99999887542 2 3345689999999999999999 6999999999999986
Q ss_pred e
Q 039336 158 G 158 (167)
Q Consensus 158 a 158 (167)
+
T Consensus 74 ~ 74 (75)
T d2ghpa2 74 L 74 (75)
T ss_dssp C
T ss_pred C
Confidence 5
No 69
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=4.1e-20 Score=122.10 Aligned_cols=78 Identities=14% Similarity=0.065 Sum_probs=70.1
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
...++|||+|||+.+++++|+.+|++ ||.|..+.+. .+|||||+|.+.++|++||+.|||..|.|+.|+
T Consensus 13 ~~~~~i~V~Nlp~~~~~~~L~~~F~~-~G~v~~~~i~----------~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~ 81 (98)
T d1wg4a_ 13 RSDFRVLVSGLPPSGSWQDLKDHMRE-AGDVCYADVQ----------KDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGE 81 (98)
T ss_dssp SCSCEEEEECCCSSCCHHHHHHHHTT-SSCEEEEEEE----------TTTEEEEEESSHHHHHHHHHHHSSEEEECTTSC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHh-hccccccccc----------ccceEEEEECCHHHHHHHHHHhCCCEeCCeEEE
Confidence 34578999999999999999999999 9999877642 469999999999999999999999999999999
Q ss_pred EEeecCCCC
Q 039336 155 IQFGRNPAA 163 (167)
Q Consensus 155 v~~a~~~~~ 163 (167)
|.+++.+.+
T Consensus 82 v~~~~~~~~ 90 (98)
T d1wg4a_ 82 TSYIRVYPE 90 (98)
T ss_dssp EEEEEEECC
T ss_pred EEEEecCCC
Confidence 999986543
No 70
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=6.5e-21 Score=118.97 Aligned_cols=71 Identities=21% Similarity=0.308 Sum_probs=65.3
Q ss_pred EEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 80 LYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 80 lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
|||+|||+++|+++|+.+|++ ||.|..+++. ....++.++|||||+|.+.++|++|+..|||..+.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~-~G~v~~~~~~---~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQP-YGKIVSTKAI---LDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTT-TSCEEEEEEE---CCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhh-hccccccccc---cccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 799999999999999999999 9999888754 3366899999999999999999999999999999999874
No 71
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=8.8e-20 Score=121.63 Aligned_cols=85 Identities=18% Similarity=0.239 Sum_probs=73.7
Q ss_pred CCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 039336 75 NPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMI 154 (167)
Q Consensus 75 ~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~ 154 (167)
....+|||+|||+++|+++|+++|.. ||.+..+.+ +....+++++|||||+|.+.++|++|+ .+|+..|+||.|+
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~-~g~v~~~v~---~~~~~~~~~kG~afV~F~~~e~a~~a~-~~~~~~i~gR~i~ 87 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSG-LEIVPNGMT---LPVDFQGRSTGEAFVQFASQEIAEKAL-KKHKERIGHRYIE 87 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTT-CCEEEEEEE---CCBCSSSCBCSEEEEEESSHHHHHHHH-TTTTCCSSSSCCE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHh-cCCceEEEE---EEeCCCCCcceEEEEEeCCHHHHHHHH-hhCCCEEcceEEE
Confidence 34567999999999999999999999 998876443 344678999999999999999999999 5999999999999
Q ss_pred EEeecCCCCC
Q 039336 155 IQFGRNPAAA 164 (167)
Q Consensus 155 v~~a~~~~~~ 164 (167)
|.++..+...
T Consensus 88 V~~~~~~~~~ 97 (104)
T d1wg5a_ 88 IFKSSRAEVR 97 (104)
T ss_dssp EEEECTTTSC
T ss_pred EEECCHHHhc
Confidence 9999876543
No 72
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=4.8e-20 Score=122.52 Aligned_cols=84 Identities=14% Similarity=0.265 Sum_probs=72.1
Q ss_pred CCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeee
Q 039336 74 GNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPM 153 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l 153 (167)
...+.+|||+|||+.+|+++|+.+|.. ||.+ .+.+ ....+|.++|||||+|.+.++|++|+ .+||..|+||.|
T Consensus 12 ~~~~~~v~v~nLp~~~te~dl~~~F~~-~~~~-~v~~----~~~~~g~~~G~afVeF~~~~~a~~Al-~~~~~~i~gR~I 84 (102)
T d1weza_ 12 STTGHCVHMRGLPYRATENDIYNFFSP-LNPM-RVHI----EIGPDGRVTGEADVEFATHEDAVAAM-AKDKANMQHRYV 84 (102)
T ss_dssp CSSSCEEEEESCCTTCCHHHHHHSSCS-CCCS-EEEE----EESSSSCEEEEEEEECSSSHHHHHHH-TTSSCCSSSSCC
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHhc-cCcc-eeee----EEecCCcceEEEEEEECCHHHHHHHH-HcCCCEECCEEE
Confidence 345678999999999999999999999 9854 4443 33567899999999999999999998 599999999999
Q ss_pred EEEeecCCCCC
Q 039336 154 IIQFGRNPAAA 164 (167)
Q Consensus 154 ~v~~a~~~~~~ 164 (167)
+|.++......
T Consensus 85 ~V~~s~~~~~~ 95 (102)
T d1weza_ 85 ELFLNSTAGTS 95 (102)
T ss_dssp EEEEECCCCCC
T ss_pred EEEEcCCCCCC
Confidence 99999876544
No 73
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=8.5e-20 Score=120.74 Aligned_cols=80 Identities=19% Similarity=0.278 Sum_probs=69.9
Q ss_pred CCCCCCEEEecCCCCC-CCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHH--HhCCceeC
Q 039336 73 AGNPASVLYIKNLAKD-VIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALN--LVNGYVFK 149 (167)
Q Consensus 73 ~~~~~~~lfV~nLp~~-~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~--~l~g~~l~ 149 (167)
...++++|||+|||.. +|+++|..+|++ ||.|..+.+. +++|||||+|.+.++|.+|+. .+++..++
T Consensus 14 ~~~~~~~l~v~nLp~~~~te~~l~~~F~~-fG~V~~v~~~---------~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~ 83 (99)
T d1x4fa1 14 KQELGRVIHLSNLPHSGYSDSAVLKLAEP-YGKIKNYILM---------RMKSQAFIEMETREDAMAMVDHCLKKALWFQ 83 (99)
T ss_dssp SSCCCCEEEEESCCCSSCCSHHHHTTTTT-TSCCSEEEEE---------TTTTEEEEECSSHHHHHHHHHHHHHSCCCSS
T ss_pred CCCCCCEEEEeCCcCCccCHHHHHhhhcc-ccceeEEEEe---------ecCCcEEEEecchHHHHHHHHHHhcCCceEC
Confidence 3456789999999985 899999999999 9999887642 358999999999999999997 57888999
Q ss_pred CeeeEEEeecCCC
Q 039336 150 GKPMIIQFGRNPA 162 (167)
Q Consensus 150 gr~l~v~~a~~~~ 162 (167)
|++|+|+||+.+.
T Consensus 84 gr~l~V~~s~~~~ 96 (99)
T d1x4fa1 84 GRCVKVDLSEKYK 96 (99)
T ss_dssp SSCCEEEEECSCS
T ss_pred CEEEEEEEcCCcc
Confidence 9999999997654
No 74
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.2e-20 Score=122.07 Aligned_cols=72 Identities=15% Similarity=0.066 Sum_probs=65.5
Q ss_pred EEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEee
Q 039336 79 VLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFG 158 (167)
Q Consensus 79 ~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~a 158 (167)
+|||+|||+.+++++|+++|++ ||.|..+++. ..|||||+|.+.++|++||..|||..|.|+.|+|.++
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~-~G~v~~~~i~----------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~ 70 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMRE-AGDVCYADVY----------RDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYI 70 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGG-GSCEEEEEEC----------TTSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBC
T ss_pred eEEEECCCCcCCHHHHHHHHhh-hccccccccc----------ccceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEE
Confidence 5999999999999999999999 9999877642 3589999999999999999999999999999999887
Q ss_pred cCC
Q 039336 159 RNP 161 (167)
Q Consensus 159 ~~~ 161 (167)
+.+
T Consensus 71 ~~~ 73 (87)
T d3begb1 71 RVK 73 (87)
T ss_dssp EEE
T ss_pred ecC
Confidence 644
No 75
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.3e-19 Score=120.46 Aligned_cols=79 Identities=16% Similarity=0.187 Sum_probs=69.6
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
...+|||+|||+++|+++|+.+|.. ||.+..+.+ +....+|+++|||||+|.+.++|++|| .+||..|+||.|.|
T Consensus 7 ~~~~v~v~nLp~~~t~~~l~~~F~~-~g~i~~~~~---~~~~~~g~~~G~afV~F~s~~~a~~Al-~~n~~~i~gr~i~V 81 (103)
T d2cpya1 7 AKVCAHITNIPFSITKMDVLQFLEG-IPVDENAVH---VLVDNNGQGLGQALVQFKNEDDARKSE-RLHRKKLNGREAFV 81 (103)
T ss_dssp CCCEEEEESCCTTSCHHHHHHHTTT-SCCCSTTEE---ECCCTTSSCSSCEEEECSSHHHHHHHG-GGCSEEETTEEEEE
T ss_pred CceEEEEeCCCCCCCHHHHhhhhcc-cceEEEEEE---EEeCCCCCcCccEEEEECCHHHHHHHH-hcCCCeECCcEEEE
Confidence 3467999999999999999999999 998876432 334568999999999999999999999 59999999999999
Q ss_pred Eeec
Q 039336 156 QFGR 159 (167)
Q Consensus 156 ~~a~ 159 (167)
.++.
T Consensus 82 ~~~~ 85 (103)
T d2cpya1 82 HVVT 85 (103)
T ss_dssp EEEC
T ss_pred EECC
Confidence 9875
No 76
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=2.6e-19 Score=116.16 Aligned_cols=81 Identities=16% Similarity=0.239 Sum_probs=70.6
Q ss_pred CCCCCEEEecCCCCC-CCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHh--CCceeCC
Q 039336 74 GNPASVLYIKNLAKD-VIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLV--NGYVFKG 150 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~-~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l--~g~~l~g 150 (167)
..++++|||+|||.. +|+++|..+|++ ||.|..+.+. ..+++|||+|.+.++|..|+..| ++..+.|
T Consensus 5 ~~~sr~v~v~nl~~~~~t~~eL~~lF~~-fG~I~~i~i~---------~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~g 74 (89)
T d1x4da1 5 VETRRVVHIMDFQRGKNLRYQLLQLVEP-FGVISNHLIL---------NKINEAFIEMATTEDAQAAVDYYTTTPALVFG 74 (89)
T ss_dssp CCCCCEEEEESCCCSSSHHHHHHTTTGG-GSCEEEEEEC---------SSSSCEEEEESSHHHHHHHHHHHHHSCCEETT
T ss_pred CCCCcEEEEECCCCCcCCHHHHHHHHHh-hCCeEEEEee---------ccceEEEEEEcchhhHHHHHHHHhhCCCccCC
Confidence 457789999999986 789999999999 9999887643 35789999999999999999966 6788999
Q ss_pred eeeEEEeecCCCCC
Q 039336 151 KPMIIQFGRNPAAA 164 (167)
Q Consensus 151 r~l~v~~a~~~~~~ 164 (167)
++|+|+||++....
T Consensus 75 r~l~V~~s~~~~~l 88 (89)
T d1x4da1 75 KPVRVHLSQKYKRI 88 (89)
T ss_dssp EECEEEEECCCTTS
T ss_pred ceEEEEECCCcccc
Confidence 99999999876543
No 77
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.5e-19 Score=122.12 Aligned_cols=84 Identities=13% Similarity=0.190 Sum_probs=73.1
Q ss_pred CCCCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCe
Q 039336 72 AAGNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGK 151 (167)
Q Consensus 72 ~~~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr 151 (167)
.+..++++|||+|||+.+|+++|+.+|+. ||.+..+.+ +....+|.++|||||+|.+.++|++|+ .|||..|+||
T Consensus 13 ~~~~~~~~i~v~nLp~~~t~~di~~~F~~-~g~~~~~~~---~~~~~~g~~~G~afVeF~~~e~a~~al-~~~~~~i~gR 87 (112)
T d1wela1 13 SPHEAGFCVYLKGLPFEAENKHVIDFFKK-LDIVEDSIY---IAYGPNGKATGEGFVEFRNEADYKAAL-CRHKQYMGNR 87 (112)
T ss_dssp SCCCCCCEEEEECCCTTCCHHHHHHHSCS-SCBCTTTCE---EEECTTSSEEEEEEEEBSSSHHHHHHH-TSCSBCSTTS
T ss_pred CCCCCCeEEEEecCCCcCcHHHHhhHHhh-cccccccee---eecCcccceeeEEEEEECCHHHHHHHH-HcCCCcCCCE
Confidence 34556789999999999999999999999 999866543 344678999999999999999999999 5999999999
Q ss_pred eeEEEeecC
Q 039336 152 PMIIQFGRN 160 (167)
Q Consensus 152 ~l~v~~a~~ 160 (167)
.|.|..+..
T Consensus 88 ~i~V~~~~~ 96 (112)
T d1wela1 88 FIQVHPITK 96 (112)
T ss_dssp CBEEEEECH
T ss_pred EEEEEEcCh
Confidence 999998743
No 78
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=5.2e-19 Score=117.92 Aligned_cols=78 Identities=18% Similarity=0.110 Sum_probs=68.0
Q ss_pred CCCEEEecCCCCCC-CH----HHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCC
Q 039336 76 PASVLYIKNLAKDV-IP----DDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKG 150 (167)
Q Consensus 76 ~~~~lfV~nLp~~~-t~----~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~g 150 (167)
.+++|||+||+.++ ++ ++|+.+|++ ||.|..+++. +++|||||+|.+.++|.+|+..|||..|+|
T Consensus 4 ~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~-~G~i~~~~~~---------k~~~~afV~f~~~~~A~~Ai~~lng~~~~g 73 (104)
T d1weya_ 4 GSSGLIACVANDDVFSESETRAKFESLFRT-YDKDTTFQYF---------KSFKRVRINFSNPLSAADARLRLHKTEFLG 73 (104)
T ss_dssp CCCEEEEECCCGGGGSTTTHHHHHHHHHHT-TCSSCEEEEE---------TTTTEEEEECSSTTHHHHHHHTSTTSEETT
T ss_pred CCceEEEEeCCchhcCcHHHHHHHHHHhcc-cccceEEEEe---------cCCCEEEEEECCHHHHHHHHHHhcccccCC
Confidence 56789999999876 33 569999999 9999877632 578999999999999999999999999999
Q ss_pred eeeEEEeecCCCC
Q 039336 151 KPMIIQFGRNPAA 163 (167)
Q Consensus 151 r~l~v~~a~~~~~ 163 (167)
++|+|.||+.+..
T Consensus 74 ~~l~v~~a~~~~~ 86 (104)
T d1weya_ 74 KEMKLYFAQTLHI 86 (104)
T ss_dssp EECEEECCCCSSC
T ss_pred CEeEEeecccCCC
Confidence 9999999986643
No 79
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.6e-18 Score=124.36 Aligned_cols=86 Identities=15% Similarity=0.206 Sum_probs=75.9
Q ss_pred CCCCCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeee
Q 039336 74 GNPASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPM 153 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l 153 (167)
....++|||+|||+.+|+++|+.+|+. ||.|..+.++ .+..+|.++|||||+|.+.++|.+|+. +++..+.|++|
T Consensus 94 ~~~~~~i~V~~lp~~~te~~L~~~f~~-~G~v~~~~i~---~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i 168 (183)
T d1u1qa_ 94 HLTVKKIFVGGIKEDTEEHHLRDYFEQ-YGKIEVIEIM---TDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNC 168 (183)
T ss_dssp TCCCSEEEEECCCTTCCHHHHHHHHGG-GSCEEEEEEE---ECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEE
T ss_pred ccccceeEEccCCCcCCHHHHhhhhcc-CCceeeeeee---cccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEE
Confidence 345688999999999999999999999 9999988754 336679999999999999999999995 79999999999
Q ss_pred EEEeecCCCCC
Q 039336 154 IIQFGRNPAAA 164 (167)
Q Consensus 154 ~v~~a~~~~~~ 164 (167)
+|.+|.++.+.
T Consensus 169 ~V~~A~~k~e~ 179 (183)
T d1u1qa_ 169 EVRKALSKQEM 179 (183)
T ss_dssp EEEECCCHHHH
T ss_pred EEEecCCcccc
Confidence 99999877543
No 80
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=3.7e-20 Score=120.35 Aligned_cols=80 Identities=20% Similarity=0.331 Sum_probs=68.3
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeee--eeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCG--LTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMII 155 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~--~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v 155 (167)
++|||+|||+.+|+++|+++|++ ||.+..+.+. ..+....+++++|||||+|.+.++|+.|+ .|||..|.|+.|+|
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~-~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~~Gr~l~V 79 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNA-QMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIFQGQSLKI 79 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHH-HHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCSSSSCCCC
T ss_pred CEEEEcCCCCccchHHHHHHHHh-hCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEECCEEEEE
Confidence 57999999999999999999999 9988765432 11334567889999999999999999998 69999999999999
Q ss_pred Eeec
Q 039336 156 QFGR 159 (167)
Q Consensus 156 ~~a~ 159 (167)
..++
T Consensus 80 ~r~k 83 (90)
T d1u2fa_ 80 RRPH 83 (90)
T ss_dssp BCTT
T ss_pred CCCC
Confidence 7544
No 81
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=2.5e-18 Score=114.52 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=69.4
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQF 157 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~ 157 (167)
+.++|++++..+++++|+++|++ ||.|.+++++ ...+|+++|||||+|.+.++|.+|+..|||..+.||+|+|+|
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k-~G~I~~v~I~----~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~ 102 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEK-YGEVEEMNVC----DNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAEL 102 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEC----CSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEE
T ss_pred chHHhhhhhhhhhHHHHHHHhcc-CCCEEEEEee----cCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEE
Confidence 34888999989999999999999 9999998853 346899999999999999999999999999999999999998
Q ss_pred e
Q 039336 158 G 158 (167)
Q Consensus 158 a 158 (167)
+
T Consensus 103 s 103 (104)
T d1jmta_ 103 S 103 (104)
T ss_dssp C
T ss_pred C
Confidence 6
No 82
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=1.1e-16 Score=105.58 Aligned_cols=83 Identities=24% Similarity=0.269 Sum_probs=70.0
Q ss_pred CCCCCEEEecCC--CCCC---------CHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHH
Q 039336 74 GNPASVLYIKNL--AKDV---------IPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNL 142 (167)
Q Consensus 74 ~~~~~~lfV~nL--p~~~---------t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~ 142 (167)
...+++|+|+|| |.++ ..++|+..|++ ||.|..+.+. .++++|||||+|.+.++|.+|+..
T Consensus 5 ~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~-~G~V~~v~~~-------~~~~~G~~fV~f~~~e~A~~A~~~ 76 (99)
T d2dita1 5 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK-FGQIRKLLLF-------DRHPDGVASVSFRDPEEADYCIQT 76 (99)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGG-TSCCSEEEEE-------TTCTTCEEEEECSCHHHHHHHHHH
T ss_pred CCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcC-cccEEEEecc-------CCCCccEEEEEECCHHHHHHHHHH
Confidence 346789999999 5432 12678999999 9999887643 456789999999999999999999
Q ss_pred hCCceeCCeeeEEEeecCCCCC
Q 039336 143 VNGYVFKGKPMIIQFGRNPAAA 164 (167)
Q Consensus 143 l~g~~l~gr~l~v~~a~~~~~~ 164 (167)
|||..+.||+|+|+|+.++.+.
T Consensus 77 lng~~~~gr~i~v~~~~g~~~~ 98 (99)
T d2dita1 77 LDGRWFGGRQITAQAWDGTTDY 98 (99)
T ss_dssp STTCEETTEECEEEECCSCCCS
T ss_pred hCCcEECCEEEEEEEeCCcCCC
Confidence 9999999999999999887654
No 83
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.9e-16 Score=106.76 Aligned_cols=76 Identities=12% Similarity=0.123 Sum_probs=65.6
Q ss_pred CCCE-EEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCH-HHHHHHHHHhCCceeCCeee
Q 039336 76 PASV-LYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSV-ELAHRALNLVNGYVFKGKPM 153 (167)
Q Consensus 76 ~~~~-lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~-~~A~~Al~~l~g~~l~gr~l 153 (167)
.++. +||+|||+.+|+++|+.+|++ ||.|.+|.++ +.+|||||.|.++ ++|..|+..|+|..+.++.+
T Consensus 9 ~g~~~~fvgnL~~~~tee~Lk~~F~~-fG~V~~v~i~---------~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~ 78 (113)
T d1owxa_ 9 IGCLLKFSGDLDDQTCREDLHILFSN-HGEIKWIDFV---------RGAKEGIILFKEKAKEALGKAKDANNGNLQLRNK 78 (113)
T ss_dssp CCCEEEEEESCCSSCCHHHHHHHTCS-SCCEEEEECC---------TTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSS
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHh-cCChheEEEe---------cCCceEEEEecCcHHHHHHHHHHhcCCceecCce
Confidence 4455 599999999999999999999 9999888753 3589999999985 78999999999999988888
Q ss_pred EEEeecCC
Q 039336 154 IIQFGRNP 161 (167)
Q Consensus 154 ~v~~a~~~ 161 (167)
.|.++...
T Consensus 79 ~v~~~~~~ 86 (113)
T d1owxa_ 79 EVTWEVLE 86 (113)
T ss_dssp SEEEEECC
T ss_pred EEEEeecc
Confidence 88887654
No 84
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=3.2e-16 Score=103.60 Aligned_cols=65 Identities=20% Similarity=0.283 Sum_probs=57.4
Q ss_pred CCCCCEEEecC--CCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCcee
Q 039336 74 GNPASVLYIKN--LAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVF 148 (167)
Q Consensus 74 ~~~~~~lfV~n--Lp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l 148 (167)
..|+.+|||.| ||+.+|+++|+.+|++ ||.|..+++. ..+|||||+|.+.++|.+|+..|||..+
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~~-~G~i~~i~~~---------~~k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLEK-CGLVDALLMP---------PNKPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHHH-HSCEEEEECC---------TTCSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHHh-hCcccEEeec---------cCccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 45678899955 9999999999999999 9999877632 3578999999999999999999999986
No 85
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=3.9e-15 Score=107.31 Aligned_cols=79 Identities=19% Similarity=0.243 Sum_probs=68.9
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQF 157 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~ 157 (167)
++|||+|||+.+|+++|+++|++ ||.|..+.++ +...+|.++|||||+|.+.++|.+|+ .+++..++++.+.+..
T Consensus 7 r~lfV~nLp~~~te~~L~~~F~~-~G~v~~~~~~---~~~~~~~~~g~afv~f~~~~~a~~a~-~~~~~~~~~~~~~~~~ 81 (183)
T d1u1qa_ 7 RKLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVM---RDPNTKRSRGFGFVTYATVEEVDAAM-NARPHKVDGRVVEPKR 81 (183)
T ss_dssp HEEEEESCCTTCCHHHHHHHHGG-GSCEEEEEEE---ECTTTCCEEEEEEEEESSHHHHHHHH-HTCSCEETTEECEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHH-cCCEEEEEee---ecccCCCccCceecccCCHHHHHHHH-HhcCCcccccchhhhh
Confidence 68999999999999999999999 9999888764 33668999999999999999999999 5667778888888877
Q ss_pred ecCC
Q 039336 158 GRNP 161 (167)
Q Consensus 158 a~~~ 161 (167)
....
T Consensus 82 ~~~~ 85 (183)
T d1u1qa_ 82 AVSR 85 (183)
T ss_dssp CCCT
T ss_pred hhhc
Confidence 6544
No 86
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.3e-15 Score=101.17 Aligned_cols=84 Identities=20% Similarity=0.310 Sum_probs=68.1
Q ss_pred CCCCCEEEecCC--CCCCC--------HHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHh
Q 039336 74 GNPASVLYIKNL--AKDVI--------PDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLV 143 (167)
Q Consensus 74 ~~~~~~lfV~nL--p~~~t--------~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l 143 (167)
+.|+++|+|+|| |..+. .++|+..|++ ||.|.++.++.+ .........|++||.|.+.++|.+|+..|
T Consensus 1 g~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k-~G~v~~v~I~~~-~~~~~~~~~g~vfV~f~~~e~A~~A~~~l 78 (104)
T d1o0pa_ 1 GHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSK-YGLVKSIEIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGL 78 (104)
T ss_dssp CCCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTT-TSCEEEEECCCC-TTSSSCTTCCEEEEEESCHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcc-cCceEEEEEeec-CCCCccCCceEEEEEECCHHHHHHHHHHH
Confidence 468899999999 54432 3568999999 999999886432 11123456799999999999999999999
Q ss_pred CCceeCCeeeEEEeec
Q 039336 144 NGYVFKGKPMIIQFGR 159 (167)
Q Consensus 144 ~g~~l~gr~l~v~~a~ 159 (167)
||..++||.|.|.|+.
T Consensus 79 ~Gr~f~gR~v~v~f~~ 94 (104)
T d1o0pa_ 79 TGRKFANRVVVTKYCD 94 (104)
T ss_dssp SSCCSSSSCCEEEEEC
T ss_pred CCCEECCeEEEEEEcC
Confidence 9999999999999985
No 87
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=5.6e-15 Score=93.67 Aligned_cols=71 Identities=13% Similarity=0.146 Sum_probs=59.0
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCee-eEEE
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKP-MIIQ 156 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~-l~v~ 156 (167)
+.|||.++|++++++.| .+|++ ||.|.++++ ++.+|||||+|.++++|++|| .+||..|+|+. |.|.
T Consensus 5 ~wV~V~G~p~~~~~~il-~~F~~-~G~I~~~~~---------~~~~~~~fV~f~~~~~A~~Al-~~nG~~~~g~~~vgV~ 72 (81)
T d1wwha1 5 TWVTVFGFPQASASYIL-LQFAQ-YGNILKHVM---------SNTGNWMHIRYQSKLQARKAL-SKDGRIFGESIMIGVK 72 (81)
T ss_dssp GEEEEECCCGGGHHHHH-HHHHT-TSCEEEEEE---------CSSSSEEEEEESSHHHHHHHH-TTTTCEETTTEECEEE
T ss_pred cEEEEECCChHHHHHHH-HHHHh-hhhhheEEe---------cCCCCEEEEEEcccHHHHHHH-hcCCCeECCcEEEEEE
Confidence 56999999999886555 57999 999976652 357899999999999999999 59999999985 5677
Q ss_pred eecC
Q 039336 157 FGRN 160 (167)
Q Consensus 157 ~a~~ 160 (167)
.+..
T Consensus 73 ~~~~ 76 (81)
T d1wwha1 73 PCID 76 (81)
T ss_dssp ECCC
T ss_pred eCCC
Confidence 6644
No 88
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.83 E-value=3.5e-05 Score=48.03 Aligned_cols=71 Identities=24% Similarity=0.366 Sum_probs=54.2
Q ss_pred CCCCCEEEecCCCCCCCH---------HHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhC
Q 039336 74 GNPASVLYIKNLAKDVIP---------DDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVN 144 (167)
Q Consensus 74 ~~~~~~lfV~nLp~~~t~---------~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~ 144 (167)
++|.-||.|.=..++..+ .+|.+.|.. ||.|.-+|++ .+...|+|.+-++|.+|+ .++
T Consensus 12 GPpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~-~GeViLvRFv-----------~d~mwVTF~dG~SAL~al-~l~ 78 (95)
T d1ufwa_ 12 GPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGS-YGTIVLVRIN-----------QGQMLVTFADSHSALSVL-DVD 78 (95)
T ss_dssp CCTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHH-HSCCSEEEEE-----------TTEEEEECSCSHHHHHHH-HGG
T ss_pred CCCCcEEEEEeccCCccccccCCHHHHHHHHHHHhh-CCeEEEEEEe-----------CCeEEEEECCcHHHHHHh-ccC
Confidence 456667777544433222 356778889 9998666532 467899999999999999 999
Q ss_pred CceeCCeeeEEEe
Q 039336 145 GYVFKGKPMIIQF 157 (167)
Q Consensus 145 g~~l~gr~l~v~~ 157 (167)
|..+.|+.|.|..
T Consensus 79 g~~v~G~~l~It~ 91 (95)
T d1ufwa_ 79 GMKVKGRAVKISG 91 (95)
T ss_dssp GSEETTEEEEEEC
T ss_pred CeEEcceEEEEec
Confidence 9999999999974
No 89
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.66 E-value=0.00031 Score=43.93 Aligned_cols=80 Identities=20% Similarity=0.230 Sum_probs=59.4
Q ss_pred CEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCC-C-CcccEEEEEeCCHHHHHHHHHHhCCceeC---C--
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQE-G-RMRGQAFVTFPSVELAHRALNLVNGYVFK---G-- 150 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~-g-~~kg~aFV~f~~~~~A~~Al~~l~g~~l~---g-- 150 (167)
+.|.||+||+.+|++++.+.++. .|.+...... .-..+ + ..-.-|||.|.+.++.....+.++|..+. |
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~-~~~~d~~~f~---~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~ 77 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQP-MPEHDYFEFF---SNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQE 77 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCS-CCCEEEEEEE---ESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCE
T ss_pred ceEEEecCCCCCCHHHHHHHhCC-cCceEEEEEe---CCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCE
Confidence 46889999999999999999998 8887654321 11111 2 23468999999999999999999999973 2
Q ss_pred eeeEEEeecCC
Q 039336 151 KPMIIQFGRNP 161 (167)
Q Consensus 151 r~l~v~~a~~~ 161 (167)
.+-.|++|-.+
T Consensus 78 ~~a~VE~AP~q 88 (91)
T d1uw4a_ 78 YPAIVEFAPFQ 88 (91)
T ss_dssp EECEEEECSSC
T ss_pred eeeEEEEcCcc
Confidence 23467777544
No 90
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.63 E-value=0.00032 Score=41.47 Aligned_cols=60 Identities=15% Similarity=0.254 Sum_probs=48.0
Q ss_pred HHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeecC
Q 039336 94 FFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFGRN 160 (167)
Q Consensus 94 L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~~l~gr~l~v~~a~~ 160 (167)
|...|.+ +|.|.++.+. .-....-.|-|...+..+|.-|+..|+...|++++|.|+++.+
T Consensus 13 L~~~f~~-h~~V~sv~l~------~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~~ 72 (73)
T d2dgxa1 13 LQEAFAR-HGKVKSVELS------PHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATG 72 (73)
T ss_dssp HHHHHHH-HSCEEEEEEC------SCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHHHHh-heeEEEEEEE------eccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEecC
Confidence 4567888 9999665532 1222345789999999999999999999999999999999864
No 91
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.05 E-value=0.096 Score=32.50 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=44.6
Q ss_pred CCEEEecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhC
Q 039336 77 ASVLYIKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVN 144 (167)
Q Consensus 77 ~~~lfV~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~ 144 (167)
..-||.-..|..+...+|..+|+. ||.|. +..+ .-.-|||...+.++|+.++..+.
T Consensus 15 RdHVf~~tFP~~Wk~~dI~~lFSp-fG~V~-VswI----------ddTSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 15 RDHVLHVTFPKEWKTSDLYQLFSA-FGNIQ-ISWI----------DDTSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCSEEEEECCTTCCHHHHHHHHTT-TCSCC-CEEE----------ETTEEEEECSCHHHHHHHHHHHH
T ss_pred cceeEEEeCCcccchhHHHHHhcC-CCceE-EEEe----------cCceEEEEecCHHHHHHHHHHhc
Confidence 345888899999999999999999 99983 2211 23489999999999999886654
No 92
>d1xn9a_ d.12.1.3 (A:) Ribosomal protein S24e {Methanosarcina mazei [TaxId: 2209]}
Probab=80.05 E-value=3.6 Score=25.13 Aligned_cols=56 Identities=9% Similarity=0.027 Sum_probs=34.2
Q ss_pred ecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeec-CCCCcccEEEEEeCCHHHHHH
Q 039336 82 IKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLM-QEGRMRGQAFVTFPSVELAHR 138 (167)
Q Consensus 82 V~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~-~~g~~kg~aFV~f~~~~~A~~ 138 (167)
|.+.....+-.+++..+.+.||.-..+-++..+... ..|.+.|||+| |.+.+.|..
T Consensus 23 v~h~g~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~k~ 79 (101)
T d1xn9a_ 23 VKYEGSTPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGMQESKGYAKL-YEDADRMKQ 79 (101)
T ss_dssp EECSSSCCCHHHHHHHHHHHTTCCTTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHH
T ss_pred EECCCCCCCHHHHHHHHHHhHCcCcCEEEEEcCcccCCCceEEEEEEE-ECCHHHHHh
Confidence 334434678889998888778864444444444332 23556677665 777777664
No 93
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus maripaludis [TaxId: 39152]}
Probab=79.62 E-value=3.5 Score=25.24 Aligned_cols=56 Identities=9% Similarity=-0.018 Sum_probs=33.8
Q ss_pred ecCCCCCCCHHHHHHHHhhccCCeeeeeeeeeeeec-CCCCcccEEEEEeCCHHHHHH
Q 039336 82 IKNLAKDVIPDDFFFIFGSLFGSIDAAKCGLTVKLM-QEGRMRGQAFVTFPSVELAHR 138 (167)
Q Consensus 82 V~nLp~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~-~~g~~kg~aFV~f~~~~~A~~ 138 (167)
|.+.....+..+++..+.+.||.=...-++..+... ..|.+.|||+| |.+.+.|..
T Consensus 23 v~h~g~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 79 (102)
T d1ywxa1 23 VSFDAATPSIKDVKMKLVAVLNANKQVLVVDTLDQIFGKLEAEGYAKI-YNDEKAMAT 79 (102)
T ss_dssp EECSSCCCCHHHHHHHHHHHHTSCSTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHH
T ss_pred EECCCCCCCHHHHHHHHHHHHCcCcCEEEEEcCEecCCCCeEEEEEEE-ECCHHHHHh
Confidence 334334567888888888767754444343443332 34566777765 777777764
No 94
>d2g1da1 d.12.1.3 (A:1-98) Ribosomal protein S24e {Thermoplasma acidophilum [TaxId: 2303]}
Probab=58.38 E-value=6.2 Score=23.86 Aligned_cols=51 Identities=8% Similarity=-0.013 Sum_probs=28.2
Q ss_pred CCCCHHHHHHHHhhccCCeeeeeeeeeeeec-CCCCcccEEEEEeCCHHHHHH
Q 039336 87 KDVIPDDFFFIFGSLFGSIDAAKCGLTVKLM-QEGRMRGQAFVTFPSVELAHR 138 (167)
Q Consensus 87 ~~~t~~~L~~~F~~~~G~i~~~~~~~~i~~~-~~g~~kg~aFV~f~~~~~A~~ 138 (167)
...+..+|+..+.+.||.-...-++..+... ..|.+.|||+| |.+.+.|.+
T Consensus 29 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 80 (98)
T d2g1da1 29 RTPSREEIKELIAKHEGVDKELVIVDNNKQLTGKHEIEGYTKI-YADKPSAML 80 (98)
T ss_dssp SCCCHHHHHHHHHHHHHSCSTTEECCCCCCCSSSSEEEEEEEE-ESHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCcCEEEEEcCEecCCCceEEEEEEE-ECCHHHHHh
Confidence 4667888888887767643333332222211 23556667665 566665543
No 95
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=52.52 E-value=17 Score=22.26 Aligned_cols=40 Identities=13% Similarity=0.152 Sum_probs=28.5
Q ss_pred HHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCC
Q 039336 93 DFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNG 145 (167)
Q Consensus 93 ~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g 145 (167)
++...+.. +|.. + + + .+....|..|.+..+|..|+..+..
T Consensus 61 ~~~~~L~~-~g~~---~------M--S-GSGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 61 AVLSWLLE-YAPS---R------L--T-GTGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHTT-TSCE---E------E--C-TTSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHhh-cccc---e------e--c-CCCCEEEEEeCCHHHHHHHHHHcCc
Confidence 45556666 7753 1 1 2 2456889999999999999988853
No 96
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=37.84 E-value=37 Score=20.25 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=30.9
Q ss_pred HHHHHHHhhccCCeeeeeeeeeeeecCCCCcccEEEEEeCCHHHHHHHHHHhCCc
Q 039336 92 DDFFFIFGSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGY 146 (167)
Q Consensus 92 ~~L~~~F~~~~G~i~~~~~~~~i~~~~~g~~kg~aFV~f~~~~~A~~Al~~l~g~ 146 (167)
.+++..+.. +|... +.. +| +....|..|.+.+.|+++.+.|...
T Consensus 66 ~~~~~~l~~-~g~~~-------~~m--SG-SGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRA-LGLRG-------VLM--SG-SGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHH-TTCEE-------EEE--CT-TSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHH-hhhhh-------eee--cC-CCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 455666767 77642 111 22 4567899999999999999998754
No 97
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=28.02 E-value=27 Score=24.34 Aligned_cols=23 Identities=17% Similarity=0.299 Sum_probs=18.6
Q ss_pred CEEEecCCCCCCCHHHHHHHHhh
Q 039336 78 SVLYIKNLAKDVIPDDFFFIFGS 100 (167)
Q Consensus 78 ~~lfV~nLp~~~t~~~L~~~F~~ 100 (167)
....|+|||+.++..-|..++..
T Consensus 91 ~~~vvgNlPY~Iss~Il~~l~~~ 113 (252)
T d1qyra_ 91 PLRVFGNLPYNISTPLMFHLFSY 113 (252)
T ss_dssp CEEEEEECCTTTHHHHHHHHHTT
T ss_pred CeEEEecchHHHHHHHHHHhccc
Confidence 35778999999999988777654
No 98
>d1g6pa_ b.40.4.5 (A:) Major cold shock protein {Thermotoga maritima [TaxId: 2336]}
Probab=24.58 E-value=19 Score=19.61 Aligned_cols=13 Identities=23% Similarity=0.309 Sum_probs=10.1
Q ss_pred CcccEEEEEeCCH
Q 039336 121 RMRGQAFVTFPSV 133 (167)
Q Consensus 121 ~~kg~aFV~f~~~ 133 (167)
..||||||.-.+-
T Consensus 10 ~~kGfGFI~~~~g 22 (66)
T d1g6pa_ 10 SKKGYGFITKDEG 22 (66)
T ss_dssp TTTTEEEEEETTS
T ss_pred CCCCeeEEEecCC
Confidence 4689999987653
No 99
>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.59 E-value=50 Score=18.47 Aligned_cols=29 Identities=7% Similarity=0.046 Sum_probs=22.5
Q ss_pred CCCEEEecCCCCCCCHHHHHHHHhhccCCe
Q 039336 76 PASVLYIKNLAKDVIPDDFFFIFGSLFGSI 105 (167)
Q Consensus 76 ~~~~lfV~nLp~~~t~~~L~~~F~~~~G~i 105 (167)
.+.++|+.+.-...+.++|..+... +|..
T Consensus 5 ~g~~i~~~g~~~~~~~~~L~~li~~-~GG~ 33 (102)
T d1t15a2 5 RGLEICCYGPFTNMPTDQLEWMVQL-CGAS 33 (102)
T ss_dssp TTCEEEECSCCSSSCHHHHHHHHHH-TTCE
T ss_pred CCcEEEEeCCCCCcCHHHHHHHHHH-hCCE
Confidence 3677888875456788999999998 7764
No 100
>d1c9oa_ b.40.4.5 (A:) Major cold shock protein {Bacillus caldolyticus [TaxId: 1394]}
Probab=21.63 E-value=24 Score=19.16 Aligned_cols=12 Identities=17% Similarity=0.457 Sum_probs=9.3
Q ss_pred CcccEEEEEeCC
Q 039336 121 RMRGQAFVTFPS 132 (167)
Q Consensus 121 ~~kg~aFV~f~~ 132 (167)
..+|||||.-.+
T Consensus 11 ~~kGfGFI~~d~ 22 (66)
T d1c9oa_ 11 NEKGYGFIEVEG 22 (66)
T ss_dssp TTTTEEEEEETT
T ss_pred CCCCEEEEEecC
Confidence 468999998654
No 101
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.57 E-value=26 Score=24.89 Aligned_cols=22 Identities=14% Similarity=0.084 Sum_probs=17.9
Q ss_pred EEEecCCCCCCCHHHHHHHHhh
Q 039336 79 VLYIKNLAKDVIPDDFFFIFGS 100 (167)
Q Consensus 79 ~lfV~nLp~~~t~~~L~~~F~~ 100 (167)
...|+|||+.++..-|..++..
T Consensus 88 ~~vV~NLPY~Iss~il~~~~~~ 109 (278)
T d1zq9a1 88 DTCVANLPYQISSPFVFKLLLH 109 (278)
T ss_dssp SEEEEECCGGGHHHHHHHHHHC
T ss_pred hhhhcchHHHHHHHHHHHHHhh
Confidence 4679999999998888877654
Done!