BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039337
(1344 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449470328|ref|XP_004152869.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
sativus]
Length = 1631
Score = 2071 bits (5366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1023/1296 (78%), Positives = 1135/1296 (87%), Gaps = 25/1296 (1%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLL 70
++ PPTD S+ DE++WI+ + +G L S G DLS+++DDI+R+LDL+
Sbjct: 280 ESTGSPPTDDASLDDEASWIHGHIANGVSSL------SSNASGQDLSVTKDDILRYLDLV 333
Query: 71 HLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKW 130
H+QKLDIPFI+MYRKEE LSLLKD E D+ D ++ PTL+WHK+LWAI DLDKKW
Sbjct: 334 HVQKLDIPFISMYRKEEILSLLKDTEHEA--GDDQDKNDKAPTLRWHKLLWAIQDLDKKW 391
Query: 131 LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLK 190
LLLQKRK ALQSYYK RY EE R TR LN+QLFDS+++SLEAAE+EREVDDVD K
Sbjct: 392 LLLQKRKKALQSYYKNRYLEEIRTAEHVTRTTLNRQLFDSVNRSLEAAESEREVDDVDSK 451
Query: 191 FNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM-GD 249
FNLHFPPGEVGVDEGQ+KRPKR + YS CSKAGLWEVA KFGYSSEQ GLQLSLEKM D
Sbjct: 452 FNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRND 511
Query: 250 ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
ELEDPKETPEEMASNF CAMF S QAVL+GARHMAA+EISCEPCVRK+VRS FMD AV+S
Sbjct: 512 ELEDPKETPEEMASNFTCAMFESPQAVLKGARHMAAIEISCEPCVRKHVRSYFMDYAVIS 571
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
T PT DG+ AIDSFHQF+ VKWLREKPL +FEDAQWLLIQKAEEEKLL VT+KLPE LN
Sbjct: 572 TSPTADGNVAIDSFHQFSVVKWLREKPLNRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLN 631
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
KL SD E+YLSDGVSKSAQLWN+QR+LIL+DAL FLLPSM KEARSLM+ +AK WLLM
Sbjct: 632 KLISDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLM 691
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLF 489
EYGK LW+KVS+GPYQ K+NDI+ DEEAAPRV+ACCWGPGKP TTFVMLDSSGEV+DVL+
Sbjct: 692 EYGKNLWSKVSIGPYQHKENDISSDEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLY 751
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
TG LTLRSQNV DQQ KKNDQER+LKFM DHQPHVVVLGAVNLSCT LKDDIYEIIFKMV
Sbjct: 752 TGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMV 811
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
EE+PRDVGHEMD LSIVYGDESLPRLYENSRISSDQL GQ G VKRAVALGRYLQNPLAM
Sbjct: 812 EENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAM 871
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
VATLCGPGREILSWKL PLENFLTPDEKYGM+EQVMVDVTNQVGLD NLAI EW F+PL
Sbjct: 872 VATLCGPGREILSWKLNPLENFLTPDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPL 931
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
QFI+GLGPRKAASLQRSLVRAG+IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG AASSS
Sbjct: 932 QFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSS 991
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYL 789
QFIDLLDDTRIHPESY LAQELAK+V++ D++GD NDDEDA EMAIEHVRDRP LL+T
Sbjct: 992 QFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDA-EMAIEHVRDRPHLLRTLD 1050
Query: 790 LDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
+D + K KKRE+K ET I+REL+ GFQDWR QY+EPSQDEEFYMISGETEDTLAEGR+
Sbjct: 1051 VDEYAKSKKREDKIETFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRI 1110
Query: 850 VQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKN 908
VQATVR+V GQ+AIC LESGL GMLMKEDY+DD RD S+LSD+L EGDI+TCKIKSIQKN
Sbjct: 1111 VQATVRKVLGQKAICGLESGLTGMLMKEDYADDSRDISDLSDRLREGDIVTCKIKSIQKN 1170
Query: 909 RYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVH 968
RYQVFLVC+ESEMR+NR+Q QNLDPYYHE+RSS QSEQEK+RKEKELAKKHFK R+IVH
Sbjct: 1171 RYQVFLVCKESEMRSNRHQITQNLDPYYHEDRSSLQSEQEKSRKEKELAKKHFKPRMIVH 1230
Query: 969 PCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKD 1028
P FQN+TADEAM+LLS K+PGESI+RPSSRGPS+LTLTLK+YDGVYAHKDI+EGGK+HKD
Sbjct: 1231 PRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKD 1290
Query: 1029 IKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIE 1088
I SL+ IGKTLKIGEDTFEDLDEV+DRY+DPLV+HLKAMLSYRKFR+G+KAEVDEL++IE
Sbjct: 1291 ITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRKFRRGTKAEVDELMKIE 1350
Query: 1089 KAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAY 1148
K+E+P RI+YGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAY
Sbjct: 1351 KSEYPMRIIYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAY 1410
Query: 1149 FQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSG-WGGSTNEGGW-----NRDR 1202
FQRHIDDPQ DSAPSIRSVAAMVPMRSPA GGS+A++ WGGS++EGGW +RDR
Sbjct: 1411 FQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGSSHEGGWRSQSFDRDR 1470
Query: 1203 SSTPGSRTG-----RNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDS 1257
SSTPGSRTG RND RN GRDGHPSGLPRPYGGRGRGRGS N+NRG N++R DS
Sbjct: 1471 SSTPGSRTGEIYKRRNDNRNSSGRDGHPSGLPRPYGGRGRGRGSYNNNRG---NNDRSDS 1527
Query: 1258 SYDTPKWDSANKSGDDSWGNFPGAKAQNPAGREAFP 1293
YD +WDS++K GDD NFPGAK N G+EAFP
Sbjct: 1528 GYDGSRWDSSSKDGDDGLSNFPGAKIHNSPGKEAFP 1563
>gi|359481576|ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis vinifera]
Length = 1660
Score = 2068 bits (5357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1019/1295 (78%), Positives = 1146/1295 (88%), Gaps = 15/1295 (1%)
Query: 9 LRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLD 68
L ++ PPTD SI +E WI+NQL +G +PL R G+ + GHDLSI++DDIMRFLD
Sbjct: 289 LEESTGSPPTDEISIEEECNWIFNQLATGMVPLL--RSKGTSEAGHDLSINKDDIMRFLD 346
Query: 69 LLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDK 128
L+H+QKLD+PFIAMYRKEECLSLLKD +Q E ++ N D+ E+TP LKWHKVLWAI DLD+
Sbjct: 347 LVHVQKLDVPFIAMYRKEECLSLLKDPDQLEADDGNLDNPEKTPKLKWHKVLWAIQDLDR 406
Query: 129 KWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD 188
KWLLLQKRKSALQSYY +R+EEESRRIYDETRL+LNQQLF+SI KSL+AAE+EREVDD D
Sbjct: 407 KWLLLQKRKSALQSYYNRRFEEESRRIYDETRLSLNQQLFESIIKSLKAAESEREVDDAD 466
Query: 189 LKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG 248
KFNLHFPPGEVGVDEGQYKRPKR ++YS CSKAGLWEVA+KFGYSSEQ GLQ+SLEKM
Sbjct: 467 SKFNLHFPPGEVGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYSSEQFGLQISLEKM- 525
Query: 249 DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV 308
LED KE PEEMASNF CAMF + QAVL+GARHMAAVEISCEPCVRK+VRSI+MDNAVV
Sbjct: 526 --LEDAKEPPEEMASNFTCAMFETPQAVLKGARHMAAVEISCEPCVRKHVRSIYMDNAVV 583
Query: 309 STCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL 368
ST PTPDG+ ID+FHQFAGVKWLREKP+ KFEDAQWLLIQKAEEEKLLQVTIKLPE L
Sbjct: 584 STSPTPDGNVVIDAFHQFAGVKWLREKPVTKFEDAQWLLIQKAEEEKLLQVTIKLPELVL 643
Query: 369 NKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLL 428
NKL SD ++YLSDGVSKSAQLWN+QR+LIL+DA+ FLLPSM KEARSL++ R+K+WLL
Sbjct: 644 NKLISDSNDYYLSDGVSKSAQLWNEQRKLILQDAIFGFLLPSMEKEARSLLTSRSKNWLL 703
Query: 429 MEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVL 488
+EYGK LWNKVSV PYQRK+ND++ D+EAA RV+ACCWGPGKP T+FVMLDSSGEV+DVL
Sbjct: 704 LEYGKVLWNKVSVAPYQRKENDVSSDDEAALRVMACCWGPGKPATSFVMLDSSGEVLDVL 763
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
+TG LTLRSQNV DQQ KKNDQ+R+LKFM DHQPHVVVLGAVNLSC LKDDIYEIIFKM
Sbjct: 764 YTGSLTLRSQNVNDQQRKKNDQQRVLKFMTDHQPHVVVLGAVNLSCNKLKDDIYEIIFKM 823
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
VEE+PRDVGHEMD +S+VYGDESLP LYEN+RISSDQLPGQ G VKRAVALGRYLQNPLA
Sbjct: 824 VEENPRDVGHEMDGISVVYGDESLPHLYENTRISSDQLPGQSGIVKRAVALGRYLQNPLA 883
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
MV+TLCGPGREILSWKLC LE+F+TPDEKYGMIEQVMVD TNQVGLDINLA EW F+P
Sbjct: 884 MVSTLCGPGREILSWKLCSLEDFITPDEKYGMIEQVMVDATNQVGLDINLAASHEWLFSP 943
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
LQFISGLGPRKAASLQRSLVRAG I TR+DFV HGLGKKVF+NA GFLRVRRSG AA+S
Sbjct: 944 LQFISGLGPRKAASLQRSLVRAGTISTRRDFVVLHGLGKKVFLNAAGFLRVRRSGLAAAS 1003
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEVYN-RDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
SQ IDLLDDTRIHPESYGLAQELAK+VY + +DD+DALEMAIEHVRDRP+ LK
Sbjct: 1004 SQIIDLLDDTRIHPESYGLAQELAKDVYRADVEDDANDDDDDALEMAIEHVRDRPNRLKA 1063
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
+D++ K+KK ENKRETLY I+ ELI GFQDWR QY+EP+QDEEFYM++GETEDTLAEG
Sbjct: 1064 LDVDQYAKDKKLENKRETLYAIKMELIQGFQDWRRQYEEPTQDEEFYMVTGETEDTLAEG 1123
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQ 906
R+VQAT+R+VQ QRAIC+LESGL GML KEDYSDDWRD S+LSD +HEGD+LTCKIK+IQ
Sbjct: 1124 RIVQATIRKVQAQRAICMLESGLTGMLAKEDYSDDWRDISDLSDSMHEGDMLTCKIKTIQ 1183
Query: 907 KNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLI 966
KNR+QVFLVC+ESEMR+NRYQ+ NLDPYY E+RSS QSEQEKARKEKELAKKHFK R+I
Sbjct: 1184 KNRFQVFLVCKESEMRSNRYQNAPNLDPYYREDRSSLQSEQEKARKEKELAKKHFKPRMI 1243
Query: 967 VHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDH 1026
VHP FQN+TADEAM+ LS K+PGESIIRPSSRGPS+LTLTLKVYDGVYAHKDI+EGGK+H
Sbjct: 1244 VHPRFQNITADEAMEFLSDKDPGESIIRPSSRGPSFLTLTLKVYDGVYAHKDIVEGGKEH 1303
Query: 1027 KDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLR 1086
KDI SL+ IGKTLKIGEDTFEDLDEV+DRY+DPLV+HLKAMLSYRKFR+G+KAEVDE LR
Sbjct: 1304 KDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVTHLKAMLSYRKFRRGTKAEVDEQLR 1363
Query: 1087 IEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLV 1146
IEK+E+P RIVY FGISHEHPGTFILTYIRS+NPHHEY+GLYPKGFKFRKRMFEDIDRLV
Sbjct: 1364 IEKSEYPMRIVYCFGISHEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKRMFEDIDRLV 1423
Query: 1147 AYFQRHIDDPQGDSAPSIRSVAAMVPMRSPAN---GGSTASAGSGWGGSTNEGGW----- 1198
AYFQRHIDDP +SAPSIRSVAAMVPMRSPA G++ +G G +++EGGW
Sbjct: 1424 AYFQRHIDDPLHESAPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSANSSEGGWRGQSS 1483
Query: 1199 NRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSS 1258
+RDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGS SNRG +N+ERQDS
Sbjct: 1484 DRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSYGSNRGYGANNERQDSG 1543
Query: 1259 YDTPKWDSANKSGDDSWGNFPGAKAQNPAGREAFP 1293
Y TPKWDS +K G+D W +FPGAK QN G+E+FP
Sbjct: 1544 YGTPKWDSGSKDGEDGWNSFPGAKVQNSPGKESFP 1578
>gi|297741709|emb|CBI32841.3| unnamed protein product [Vitis vinifera]
Length = 1646
Score = 2064 bits (5348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1013/1295 (78%), Positives = 1137/1295 (87%), Gaps = 30/1295 (2%)
Query: 9 LRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLD 68
L ++ PPTD SI +E WI+NQL +G +PL R G+ + GHDLSI++DDIMRFLD
Sbjct: 290 LEESTGSPPTDEISIEEECNWIFNQLATGMVPLL--RSKGTSEAGHDLSINKDDIMRFLD 347
Query: 69 LLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDK 128
L+H+QKLD+PFIAMYRKEECLSLLKD +Q E ++ N D+ E+TP LKWHKVLWAI DLD+
Sbjct: 348 LVHVQKLDVPFIAMYRKEECLSLLKDPDQLEADDGNLDNPEKTPKLKWHKVLWAIQDLDR 407
Query: 129 KWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD 188
KWLLLQKRKSALQSYY +R+EEESRRIYDETRL+LNQQLF+SI KSL+AAE+EREVDD D
Sbjct: 408 KWLLLQKRKSALQSYYNRRFEEESRRIYDETRLSLNQQLFESIIKSLKAAESEREVDDAD 467
Query: 189 LKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM- 247
KFNLHFPPGEVGVDEGQYKRPKR ++YS CSKAGLWEVA+KFGYSSEQ GLQ+SLEKM
Sbjct: 468 SKFNLHFPPGEVGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYSSEQFGLQISLEKMR 527
Query: 248 GDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
DELED KE PEEMASNF CAMF + QAVL+GARHMAAVEISCEPCVRK+VRSI+MDNAV
Sbjct: 528 MDELEDAKEPPEEMASNFTCAMFETPQAVLKGARHMAAVEISCEPCVRKHVRSIYMDNAV 587
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS 367
VST PTPDG+ ID+FHQFAGVKWLREKP+ KFEDAQWLLIQKAEEEKLLQVTIKLPE
Sbjct: 588 VSTSPTPDGNVVIDAFHQFAGVKWLREKPVTKFEDAQWLLIQKAEEEKLLQVTIKLPELV 647
Query: 368 LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWL 427
LNKL SD ++YLSDGVSKSAQLWN+QR+LIL+DA+ FLLPSM KEARSL++ R+K+WL
Sbjct: 648 LNKLISDSNDYYLSDGVSKSAQLWNEQRKLILQDAIFGFLLPSMEKEARSLLTSRSKNWL 707
Query: 428 LMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDV 487
L+EYGK LWNKVSV PYQRK+ND++ D+EAA RV+ACCWGPGKP T+FVMLDSSGEV+DV
Sbjct: 708 LLEYGKVLWNKVSVAPYQRKENDVSSDDEAALRVMACCWGPGKPATSFVMLDSSGEVLDV 767
Query: 488 LFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFK 547
L+TG LTLRSQNV DQQ KKNDQ+R+LKFM DHQPHVVVLGAVNLSC LKDDIYEIIFK
Sbjct: 768 LYTGSLTLRSQNVNDQQRKKNDQQRVLKFMTDHQPHVVVLGAVNLSCNKLKDDIYEIIFK 827
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
MVEE+PRDVGHEMD +S+VYGDESLP LYEN+RISSDQLPGQ G VKRAVALGRYLQNPL
Sbjct: 828 MVEENPRDVGHEMDGISVVYGDESLPHLYENTRISSDQLPGQSGIVKRAVALGRYLQNPL 887
Query: 608 AMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
AMV+TLCGPGREILSWKLC LE+F+TPDEKYGMIEQVMVD TNQVGLDINLA EW F+
Sbjct: 888 AMVSTLCGPGREILSWKLCSLEDFITPDEKYGMIEQVMVDATNQVGLDINLAASHEWLFS 947
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
PLQFISGLGPRKAASLQRSLVRAG I TR+DFV HGLGKKVF+NA GFLRVRRSG AA+
Sbjct: 948 PLQFISGLGPRKAASLQRSLVRAGTISTRRDFVVLHGLGKKVFLNAAGFLRVRRSGLAAA 1007
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
SSQ IDLLDDTRIHPESYGLAQELAK +MAIEHVRDRP+ LK
Sbjct: 1008 SSQIIDLLDDTRIHPESYGLAQELAK------------------DMAIEHVRDRPNRLKA 1049
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
+D++ K+KK ENKRETLY I+ ELI GFQDWR QY+EP+QDEEFYM++GETEDTLAEG
Sbjct: 1050 LDVDQYAKDKKLENKRETLYAIKMELIQGFQDWRRQYEEPTQDEEFYMVTGETEDTLAEG 1109
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQ 906
R+VQAT+R+VQ QRAIC+LESGL GML KEDYSDDWRD S+LSD +HEGD+LTCKIK+IQ
Sbjct: 1110 RIVQATIRKVQAQRAICMLESGLTGMLAKEDYSDDWRDISDLSDSMHEGDMLTCKIKTIQ 1169
Query: 907 KNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLI 966
KNR+QVFLVC+ESEMR+NRYQ+ NLDPYY E+RSS QSEQEKARKEKELAKKHFK R+I
Sbjct: 1170 KNRFQVFLVCKESEMRSNRYQNAPNLDPYYREDRSSLQSEQEKARKEKELAKKHFKPRMI 1229
Query: 967 VHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDH 1026
VHP FQN+TADEAM+ LS K+PGESIIRPSSRGPS+LTLTLKVYDGVYAHKDI+EGGK+H
Sbjct: 1230 VHPRFQNITADEAMEFLSDKDPGESIIRPSSRGPSFLTLTLKVYDGVYAHKDIVEGGKEH 1289
Query: 1027 KDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLR 1086
KDI SL+ IGKTLKIGEDTFEDLDEV+DRY+DPLV+HLKAMLSYRKFR+G+KAEVDE LR
Sbjct: 1290 KDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVTHLKAMLSYRKFRRGTKAEVDEQLR 1349
Query: 1087 IEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLV 1146
IEK+E+P RIVY FGISHEHPGTFILTYIRS+NPHHEY+GLYPKGFKFRKRMFEDIDRLV
Sbjct: 1350 IEKSEYPMRIVYCFGISHEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKRMFEDIDRLV 1409
Query: 1147 AYFQRHIDDPQGDSAPSIRSVAAMVPMRSPAN---GGSTASAGSGWGGSTNEGGW----- 1198
AYFQRHIDDP +SAPSIRSVAAMVPMRSPA G++ +G G +++EGGW
Sbjct: 1410 AYFQRHIDDPLHESAPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSANSSEGGWRGQSS 1469
Query: 1199 NRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSS 1258
+RDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGS SNRG +N+ERQDS
Sbjct: 1470 DRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSYGSNRGYGANNERQDSG 1529
Query: 1259 YDTPKWDSANKSGDDSWGNFPGAKAQNPAGREAFP 1293
Y TPKWDS +K G+D W +FPGAK QN G+E+FP
Sbjct: 1530 YGTPKWDSGSKDGEDGWNSFPGAKVQNSPGKESFP 1564
>gi|224086751|ref|XP_002307949.1| global transcription factor group [Populus trichocarpa]
gi|222853925|gb|EEE91472.1| global transcription factor group [Populus trichocarpa]
Length = 1648
Score = 2055 bits (5323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1033/1339 (77%), Positives = 1149/1339 (85%), Gaps = 31/1339 (2%)
Query: 16 PPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKL 75
PP D SI++ES WIY+Q+ SGTLPLF + G L I++DD+ RFL+L H+QKL
Sbjct: 291 PPLDDFSIMEESNWIYSQIASGTLPLFAESG---------LLINKDDVTRFLELHHIQKL 341
Query: 76 DIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQK 135
DIPFIAMYRKEECLSLLKD EQ+E +++N D R PT KWHKVLWAI DLD+KWLLLQK
Sbjct: 342 DIPFIAMYRKEECLSLLKDPEQHE-DDENPYDTGRIPTFKWHKVLWAIQDLDRKWLLLQK 400
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHF 195
RKSAL +YY KR+EEESRRIYDETRL LNQQLF+SI KSL+ AE+EREVDDVD KFNLHF
Sbjct: 401 RKSALNAYYNKRFEEESRRIYDETRLNLNQQLFESILKSLKTAESEREVDDVDAKFNLHF 460
Query: 196 PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
PPGEV VDEGQYKRP R ++YS CSKAGLWEVASKFGYS+EQLG+QLSL KM DEL+D K
Sbjct: 461 PPGEVVVDEGQYKRPMRRSQYSVCSKAGLWEVASKFGYSAEQLGMQLSLLKMEDELQDAK 520
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
ETPEEMASNF CAMF S Q VL+GARHMAAVEISCEPCVR+YVR IFMD AVVST PT D
Sbjct: 521 ETPEEMASNFTCAMFESPQTVLKGARHMAAVEISCEPCVRRYVRLIFMDKAVVSTSPTSD 580
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
G +AIDSFHQFAG+KWLREKP++KFEDAQWLLIQKAEEEKLLQVTIKLP+ +++L DC
Sbjct: 581 GKAAIDSFHQFAGIKWLREKPVKKFEDAQWLLIQKAEEEKLLQVTIKLPQKVMDQLIDDC 640
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
YLS GVSK AQLWN+QR LILKDAL FLLPSM KEARSL++ RAK+ LL EYGK
Sbjct: 641 NGRYLSIGVSKYAQLWNEQRSLILKDALFAFLLPSMEKEARSLLTSRAKNRLLWEYGKVF 700
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTL 495
WNKVSVGPYQRK++DI+ D+EAAPRV+ACCWGPGKP TTFVMLDSSGEV+DVL+ G LTL
Sbjct: 701 WNKVSVGPYQRKESDISMDDEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYAGSLTL 760
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
RSQ+ DQQ KKNDQ+R+LKFM DHQPHVVVLGAV+LSCT LKDDIYEIIFKMVEE+PRD
Sbjct: 761 RSQHASDQQRKKNDQQRVLKFMTDHQPHVVVLGAVHLSCTKLKDDIYEIIFKMVEENPRD 820
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQ G VKRAVALGRYLQNPLAMVATLCG
Sbjct: 821 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQSGIVKRAVALGRYLQNPLAMVATLCG 880
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
P REILSWKL PLENFLTPD+KY +IEQVMVD TNQVGLDINLA EW FAPLQFISGL
Sbjct: 881 PAREILSWKLNPLENFLTPDDKYMVIEQVMVDATNQVGLDINLATSHEWLFAPLQFISGL 940
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
GPRKAASLQRSLVR GAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG AASSSQFID+L
Sbjct: 941 GPRKAASLQRSLVRTGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDVL 1000
Query: 736 DDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIK 795
DDTRIHPESYGLAQELAK +Y + GD+NDD+DALEMAIEHV++RP+LLKT++ D++++
Sbjct: 1001 DDTRIHPESYGLAQELAKVIYEK-DSGDVNDDDDALEMAIEHVKERPNLLKTFVFDKYLE 1059
Query: 796 EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVR 855
+KKRENK+ET IRRELI GFQDWR QYKEP+QDEEFYMISGETEDTLAEG +VQATVR
Sbjct: 1060 DKKRENKKETFMDIRRELIQGFQDWRKQYKEPTQDEEFYMISGETEDTLAEGIIVQATVR 1119
Query: 856 RVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNRYQVFL 914
RVQG +AIC LESGL G+L KEDY+DDWRD ELSDKL E DILTCKIKSIQKNRYQVFL
Sbjct: 1120 RVQGGKAICALESGLTGILTKEDYADDWRDIPELSDKLREDDILTCKIKSIQKNRYQVFL 1179
Query: 915 VCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNV 974
VC++SEMRNNRYQ +NLD YYHE++SS +SEQEK RK++ELAKKHFK R+IVHP FQN+
Sbjct: 1180 VCKDSEMRNNRYQQARNLDRYYHEDQSSLRSEQEKVRKDRELAKKHFKPRMIVHPRFQNI 1239
Query: 975 TADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG 1034
TADEAM+ LS K+PGESIIRPSSRGPSYLTLTLKVY+GVYAHKDI+EGGK+HKDI S++
Sbjct: 1240 TADEAMEFLSDKDPGESIIRPSSRGPSYLTLTLKVYNGVYAHKDIVEGGKEHKDITSVLR 1299
Query: 1035 IGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPT 1094
IGKTLKIGEDTFEDLDEV+DRY+DPLVS+LKAMLSYRKFR G+K EVDELLRIEK++ PT
Sbjct: 1300 IGKTLKIGEDTFEDLDEVMDRYVDPLVSYLKAMLSYRKFRSGTKVEVDELLRIEKSQQPT 1359
Query: 1095 RIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHID 1154
RIVY FGI HEHPGTFILTYIRSTNPHHEY+GLYPKGFKFRKRMFEDIDRLVAYFQ+HID
Sbjct: 1360 RIVYAFGICHEHPGTFILTYIRSTNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQKHID 1419
Query: 1155 DPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGG-----WNRDRSSTPGSR 1209
D +SAPSIRSVAAMVPMRSPA GGS+ WGGST EGG ++RDRSS PGSR
Sbjct: 1420 DSLHESAPSIRSVAAMVPMRSPATGGSS------WGGSTYEGGRRGQSFDRDRSSGPGSR 1473
Query: 1210 TGRN-----DYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYDTPKW 1264
TG+ D GG RDGH SG PRPY GRGRGRGS N+ G++S +ER+DS YD P+W
Sbjct: 1474 TGKAFKNNVDVEVGGSRDGHQSGAPRPYSGRGRGRGSYNNGGGSNSGNERRDSGYDKPRW 1533
Query: 1265 DSANKSGDDSWGNFPGAKAQNPAGREAFP-GGWGSSGGGGSSGWGGASDGDNGGWGH-SS 1322
DS K GD+ WG+FPGAK QN GREAFP G + GG+ GGAS GDN GWGH +
Sbjct: 1534 DSGTKDGDEGWGSFPGAKVQNSPGREAFPGGWGAGASSGGNGWGGGASGGDNSGWGHGTD 1593
Query: 1323 GGADK-DSGWGGGGSKRSS 1340
GG D +SG G SKR S
Sbjct: 1594 GGTDSGNSGRGTTSSKRDS 1612
>gi|255567133|ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis]
gi|223536178|gb|EEF37832.1| suppressor of ty, putative [Ricinus communis]
Length = 1650
Score = 2035 bits (5272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1012/1293 (78%), Positives = 1124/1293 (86%), Gaps = 12/1293 (0%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLL 70
++ PPTD SI E+ WI +Q SG +P F Q+G S + D+ R DI RFL+L
Sbjct: 290 ESTGSPPTDEMSITAETNWILHQFASGVVPFFRQKGDQSNEGLQDVPFDRHDISRFLELH 349
Query: 71 HLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKW 130
H QKLD PFIAMYRKE+CLSLLKD EQ++++++N D +R P LKWHKVLWAI DLD+KW
Sbjct: 350 HGQKLDTPFIAMYRKEDCLSLLKDPEQHDIDDENPDKSDRKPILKWHKVLWAIQDLDRKW 409
Query: 131 LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLK 190
LLLQKRK+AL YY KR+EEESRRIYDETRL LNQQLF SI KSLEAAE+EREVDDVD K
Sbjct: 410 LLLQKRKNALNLYYNKRFEEESRRIYDETRLNLNQQLFKSILKSLEAAESEREVDDVDAK 469
Query: 191 FNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE 250
FNLHFPPGEVGVD GQYKRPKR ++YS CSKAGLWEVA+KFG+S+EQLG+ L L K+G
Sbjct: 470 FNLHFPPGEVGVDVGQYKRPKRKSQYSICSKAGLWEVANKFGFSAEQLGMALHLIKVGVF 529
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
LE+ KETPEEMASNF CAMF + QAVL+GARHMAAVEISCEP +RK+VR+I+M+NAVVST
Sbjct: 530 LENAKETPEEMASNFTCAMFETPQAVLKGARHMAAVEISCEPSIRKHVRAIYMENAVVST 589
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
PTPDG+ AID FHQFA VKWLREKP+ +FEDAQWLLIQKAEEEKLLQVT KLPE +NK
Sbjct: 590 NPTPDGNVAIDYFHQFASVKWLREKPMNRFEDAQWLLIQKAEEEKLLQVTFKLPERIMNK 649
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
L SD KEHYLSDGVSKSAQLWN+QR LIL+DAL+NFLLPSM KEARSL++ RAKSWLL E
Sbjct: 650 LNSDFKEHYLSDGVSKSAQLWNEQRSLILEDALNNFLLPSMEKEARSLLTSRAKSWLLWE 709
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFT 490
YG LWNKVSVGPYQRK+ND++ D+EAAPRV+ACCWGPGKP TTFVMLDSSGEV+DVL+
Sbjct: 710 YGNILWNKVSVGPYQRKENDVSLDDEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYA 769
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYE---IIFK 547
G LTLRSQN+ DQQ KK DQ+ +LKFM DHQPHVVVLGAV+LSCT LKDDIYE IIFK
Sbjct: 770 GSLTLRSQNITDQQQKKRDQQLVLKFMTDHQPHVVVLGAVSLSCTKLKDDIYEASIIIFK 829
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
MVEE+PRDVGHEMDELSIVYGDE+LPRLYENSRISSDQL GQ G V+RAVALGRYLQNPL
Sbjct: 830 MVEENPRDVGHEMDELSIVYGDEALPRLYENSRISSDQLAGQPGIVRRAVALGRYLQNPL 889
Query: 608 AMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
AMVATLCGP REILSWKL PLENFL DEKY MIEQ+MVDVTNQVGLDIN+A EW FA
Sbjct: 890 AMVATLCGPAREILSWKLSPLENFLNSDEKYAMIEQIMVDVTNQVGLDINMATSHEWLFA 949
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVT HGLGKKVFVNAVGFLRVRRSG AAS
Sbjct: 950 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTVHGLGKKVFVNAVGFLRVRRSGLAAS 1009
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
SSQFIDLLDDTRIHPESYGLAQE+AK+VY D +DDE ALEMAIEHVRDRP+LLK+
Sbjct: 1010 SSQFIDLLDDTRIHPESYGLAQEMAKDVYEMDNGDGNDDDE-ALEMAIEHVRDRPNLLKS 1068
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
LD ++++KKRENK+ET ++ ELI GFQDWR QYKEP+QDEEFYMISGETEDTLAEG
Sbjct: 1069 LDLDEYLQDKKRENKKETFKNVKGELIQGFQDWRKQYKEPTQDEEFYMISGETEDTLAEG 1128
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQ 906
R+VQATVRRVQG +AICVLESGL GML KEDY+DDWRD ELSD+L EG ILTCKIKSIQ
Sbjct: 1129 RIVQATVRRVQGGKAICVLESGLTGMLSKEDYADDWRDIPELSDRLQEGIILTCKIKSIQ 1188
Query: 907 KNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLI 966
KNRYQVFLVCRESEMR+NR Q + LDPYYHE+RSS QSEQEKARKEKELAKKHFK R+I
Sbjct: 1189 KNRYQVFLVCRESEMRSNRLQQVRILDPYYHEDRSSLQSEQEKARKEKELAKKHFKPRMI 1248
Query: 967 VHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDH 1026
VHP FQN+TADEAM+ LS K+PGESI+RPSSRGPSYLTLTLKVYDGV+AHKDI+EGGK+H
Sbjct: 1249 VHPRFQNITADEAMEFLSDKDPGESIVRPSSRGPSYLTLTLKVYDGVFAHKDIVEGGKEH 1308
Query: 1027 KDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLR 1086
KDI SL+ IGKTLKIGEDTFEDLDEV+DRY+DPLV+HLKAML+YRKFR+G+KAEVDE LR
Sbjct: 1309 KDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLNYRKFRRGTKAEVDEQLR 1368
Query: 1087 IEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLV 1146
IEKA++P+RIVY FGISHE+PGTFILTYIRSTNPHHEY+GLYPKGFKFRKRMFE+IDRLV
Sbjct: 1369 IEKADYPSRIVYSFGISHEYPGTFILTYIRSTNPHHEYVGLYPKGFKFRKRMFEEIDRLV 1428
Query: 1147 AYFQRHIDDPQGDSAPSIRSVAAMVPMRSPAN-GGSTASAGSGWGGSTNEGGW-----NR 1200
AYFQRHIDDP D+APSIRSVAAMVPMRSPA G S AS GSGWGGSTN+G W +R
Sbjct: 1429 AYFQRHIDDPMHDAAPSIRSVAAMVPMRSPATGGSSGASMGSGWGGSTNDGSWRAQSFDR 1488
Query: 1201 DRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYD 1260
DRSS PGSRTGRNDYR+G RD H SGLPRPYGGRG GRGS NS RGNS+ +++Q+S YD
Sbjct: 1489 DRSSGPGSRTGRNDYRSGSNRDSHQSGLPRPYGGRGHGRGSYNS-RGNSTGNDKQESGYD 1547
Query: 1261 TPKWDSANKSGDDSWGNFPGAKAQNPAGREAFP 1293
KWDS K D WG+FPGAK QN GREAFP
Sbjct: 1548 NSKWDSVAKDSDAGWGSFPGAKVQNSPGREAFP 1580
>gi|356570403|ref|XP_003553378.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
Length = 1617
Score = 1993 bits (5164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 991/1349 (73%), Positives = 1130/1349 (83%), Gaps = 31/1349 (2%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPK-EGHDLSISRDDIMRFLDL 69
++ PP D SI +ES WI QL G + ++ + S E DL + +DDI+RFL+L
Sbjct: 262 ESTGAPPLDASSIDEESQWICKQLKDGAISWIPKKISNSQNNEEDDLPVDKDDIIRFLEL 321
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKK 129
H+QKLDIPFIAMYRKE+CLSLLKDLE E +DN D ++TPTLKWHKVLWA+ DLDKK
Sbjct: 322 HHVQKLDIPFIAMYRKEDCLSLLKDLEHPEAGDDNWDKNDKTPTLKWHKVLWALQDLDKK 381
Query: 130 WLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDL 189
WLLLQKRKSALQSYY KR+EEESRR+YDETRL LN+QLF+S+ +SL+ A +E+E+DDVD
Sbjct: 382 WLLLQKRKSALQSYYNKRFEEESRRVYDETRLNLNRQLFESVMRSLKEAGSEKEIDDVDS 441
Query: 190 KFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGD 249
KFNLHFPPGE GVDEGQYKRPKR + YS+ SKAGLWEVAS+FG S EQLGL L+ E
Sbjct: 442 KFNLHFPPGEAGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSPEQLGLCLT-EVNLQ 500
Query: 250 ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
ELEDPKETPEEMASNF CAM+++ + VL+ ARHMAAVEISCEP +RKYVRS F+D+AVVS
Sbjct: 501 ELEDPKETPEEMASNFTCAMYDTPEEVLKCARHMAAVEISCEPSIRKYVRSHFLDHAVVS 560
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
TCPT DG++ IDSFHQFAGVKWLREKPL KF+D QWLLIQKAEEEKL+QV IKLPE LN
Sbjct: 561 TCPTADGNTTIDSFHQFAGVKWLREKPLSKFDDLQWLLIQKAEEEKLIQVIIKLPEQYLN 620
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
KL E+Y+SD VS+SAQLWNDQR+LIL DA+ FLLPSM KEAR +++ +AK+WLLM
Sbjct: 621 KLIDQFNEYYISDSVSRSAQLWNDQRKLILHDAIFRFLLPSMEKEARGVLASKAKNWLLM 680
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLF 489
EYGKALW KVSVGPYQ+K+ND+ D+EAAPRV+ACCWGPGKP TTFVMLDSSGEV+DVL+
Sbjct: 681 EYGKALWTKVSVGPYQQKENDLGSDDEAAPRVMACCWGPGKPLTTFVMLDSSGEVLDVLY 740
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
TG LT RSQNV DQQ KKNDQER+LKFM DHQPHVVVLGAVNLSCT LK+DIYE+IFKMV
Sbjct: 741 TGSLTFRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMV 800
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
EE+PRDVGHEMD LSIVYGDESLPRLYENSRISS+QLP Q+G V+RAVALGRYLQNPLAM
Sbjct: 801 EENPRDVGHEMDGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAM 860
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
VATLCGP +EILSWKL PLE+FL PD+K+ M+EQVMVDVTNQVGLDINLAI EW FAPL
Sbjct: 861 VATLCGPRKEILSWKLSPLESFLNPDDKFAMVEQVMVDVTNQVGLDINLAISHEWLFAPL 920
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
QF+SGLGPRKAASLQRSLVRAGAIFTRKDF+T H LGKKVFVNAVGFLRVRRSG AASSS
Sbjct: 921 QFVSGLGPRKAASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSS 980
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYL 789
QFIDLLDDTRIHPESY LAQELAK+VY D GD NDD+DALEMAIEHVRDRP LK
Sbjct: 981 QFIDLLDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRPSYLKNLD 1040
Query: 790 LDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
++++ KKR+NK +T Y I+RELI GFQDWR QY+EPSQDEEFYMISGETE+TLAEG++
Sbjct: 1041 VEQYASGKKRQNKIQTFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKI 1100
Query: 850 VQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKN 908
VQ TVRRVQ Q+AIC LESG+ G+L+KEDY+DDWRD ELSD+LHEGD+LTCKIKSIQKN
Sbjct: 1101 VQVTVRRVQAQKAICGLESGMTGILLKEDYTDDWRDIIELSDRLHEGDMLTCKIKSIQKN 1160
Query: 909 RYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVH 968
RYQVFLVC++SEMR+NR Q+ +++DPYYHE+RS QS+Q+KARKEKELAKKHFK R+IVH
Sbjct: 1161 RYQVFLVCKDSEMRSNRLQNNRDIDPYYHEDRSCFQSDQDKARKEKELAKKHFKPRMIVH 1220
Query: 969 PCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKD 1028
P FQN+TADEA++ LS K+PGESIIRPSSRGPSYLTLTLK+ DGVYAHKDI+EGGK+HKD
Sbjct: 1221 PRFQNITADEAIEFLSDKDPGESIIRPSSRGPSYLTLTLKINDGVYAHKDIVEGGKEHKD 1280
Query: 1029 IKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIE 1088
I SL+ IGKTLKIGEDTFEDLDEV+DRY+DPLV+HLKAML+YRKFRKG+KAEVDELL++E
Sbjct: 1281 ITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLNYRKFRKGTKAEVDELLKME 1340
Query: 1089 KAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAY 1148
KAE+P RIVY FGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF+FRK+MFEDIDRLVAY
Sbjct: 1341 KAEYPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAY 1400
Query: 1149 FQRHIDDPQGDSAPSIRSVAAMVPMRSPAN-----------GGSTASAGSGWGGSTNEGG 1197
FQRHIDDPQ DSAPSIRSV+AMVPMRSPA G +++ GW G + + G
Sbjct: 1401 FQRHIDDPQHDSAPSIRSVSAMVPMRSPATGGSSGASGGSGWGGGSNSEGGWRGHSYDRG 1460
Query: 1198 WNRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNS--NRGNSSNSERQ 1255
DRSSTPGS+TGR +YRN G +D HPSG+PRPYGG S NRG++SN+ERQ
Sbjct: 1461 ---DRSSTPGSKTGRGEYRNNGNQDEHPSGVPRPYGGGRGRGRGRGSYNNRGDNSNNERQ 1517
Query: 1256 DSSYDTPKWDSAN-KSGDDSWGNFPGAKAQNPAGREAFPGGWGSSGGGGSSGWGGASDGD 1314
DS Y +W S N K DD NFPGAK QN GREAFP GGG SG GGAS+ D
Sbjct: 1518 DSGYGG-RWGSNNTKDSDDGLSNFPGAKVQNSPGREAFP----GGWGGGGSGGGGASNSD 1572
Query: 1315 NGGWGHSSGGA------DKDSGWGGGGSK 1337
NGGW +SGGA SGWG K
Sbjct: 1573 NGGWEQASGGAGPSDGEQGSSGWGSATKK 1601
>gi|356504629|ref|XP_003521098.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
Length = 1663
Score = 1976 bits (5120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 972/1297 (74%), Positives = 1103/1297 (85%), Gaps = 24/1297 (1%)
Query: 16 PPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPK-EGHDLSISRDDIMRFLDLLHLQK 74
PP D SI +ES WI QL +GT+P ++ + S E DL + +DDI+RFL+L H+QK
Sbjct: 298 PPVDASSIDEESQWICKQLKNGTIPWIPKKISNSQNNEEDDLPVDKDDIIRFLELHHVQK 357
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
LDIPFIAMYRKE+CLSLLKDLE E +DN D ++TPTLKWHKVLWA+ DLDKKWLLLQ
Sbjct: 358 LDIPFIAMYRKEDCLSLLKDLEHPEAGDDNWDKNDKTPTLKWHKVLWALQDLDKKWLLLQ 417
Query: 135 KRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
KRKSALQSYY KR+EEESRR+YDETRL LN+QLF+S+ +SL+ A +EREVDDVD KFNLH
Sbjct: 418 KRKSALQSYYNKRFEEESRRVYDETRLNLNRQLFESVMRSLKEAGSEREVDDVDSKFNLH 477
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
FPPGE GVDEGQYKRPKR + YS+ SKAGLWEVAS+FG S EQLGL L+ E ELEDP
Sbjct: 478 FPPGEAGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSPEQLGLCLT-EVNLQELEDP 536
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
KETPEEMASNF CAM+++ + VL+ ARHMAAVEISCEP +RK+VRS F+D+AVVSTCPT
Sbjct: 537 KETPEEMASNFTCAMYDTPEEVLKCARHMAAVEISCEPSIRKHVRSHFLDHAVVSTCPTA 596
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
DG++ IDSFHQFAGVKWLREKPL KFED QWLLI KAEEEKL+QVTIKLPE LNKL
Sbjct: 597 DGNTTIDSFHQFAGVKWLREKPLSKFEDVQWLLIHKAEEEKLIQVTIKLPEQYLNKLIDQ 656
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
E+Y+SD VS+SAQLWNDQR+LIL DA+ FLLPSM KEAR +++ +AK+WLLMEYGKA
Sbjct: 657 FNEYYISDSVSRSAQLWNDQRKLILHDAIFRFLLPSMEKEARGVLASKAKNWLLMEYGKA 716
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLT 494
LW KV+VGPYQ+K+ND+ D+EAAPRV+ACCWGPGKP TTFVMLDSSGEV+DVL+TG LT
Sbjct: 717 LWTKVAVGPYQQKENDLGSDDEAAPRVMACCWGPGKPLTTFVMLDSSGEVLDVLYTGSLT 776
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
RSQNV DQQ KKNDQER+LKFM DHQPHVVVLGAVNLSCT LK+DIYE+IFKMVEE+PR
Sbjct: 777 FRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPR 836
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
DVGHEMD LSIVYGDESLPRLYENSRISS+QLP Q+G V+RAVALGRYLQNPLAMVATLC
Sbjct: 837 DVGHEMDGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLC 896
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
GP +EILSWKL PLE+FL PD+K+ M+EQ+MVDVTNQVGLDINLAI EW FAPLQFISG
Sbjct: 897 GPRKEILSWKLSPLESFLNPDDKFAMVEQIMVDVTNQVGLDINLAISHEWLFAPLQFISG 956
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
LGPRKAASLQRSLVRAGAIFTRKDF+T H LGKKVFVNAVGFLRVRRSG AASSSQFIDL
Sbjct: 957 LGPRKAASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDL 1016
Query: 735 LDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHI 794
LDDTRIHPESY LAQELAK+VY D GD NDD+DALEMAIEHVRDRP LK ++ +
Sbjct: 1017 LDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYA 1076
Query: 795 KEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV 854
KKR+NK +T Y I+RELI GFQDWR QY+EPSQDEEFYMISGETE+TLAEG++VQ TV
Sbjct: 1077 SGKKRQNKIQTFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQVTV 1136
Query: 855 RRVQGQRAICVLESGLAGMLMKEDYSDDWRDS-ELSDKLHEGDILTCKIKSIQKNRYQVF 913
RRVQ Q+AIC LESG+ G+L+KEDY+DDWRD ELSD+LHEGD+LTCKIKSIQKNRYQVF
Sbjct: 1137 RRVQAQKAICGLESGMTGILLKEDYTDDWRDVIELSDRLHEGDMLTCKIKSIQKNRYQVF 1196
Query: 914 LVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQN 973
LVC++SEMR+NR Q+ +++DPYYHE+RS QS+Q+KARKEKELAKKHFK R+IVHP FQN
Sbjct: 1197 LVCKDSEMRSNRLQNNRDIDPYYHEDRSCFQSDQDKARKEKELAKKHFKPRMIVHPRFQN 1256
Query: 974 VTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLV 1033
+TADEAM+ LS K+PGESIIRPSSRGPSYLTLTLK+ DGVYAHKDI+EGGK+HKDI SL+
Sbjct: 1257 ITADEAMEFLSDKDPGESIIRPSSRGPSYLTLTLKINDGVYAHKDIVEGGKEHKDITSLL 1316
Query: 1034 GIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFP 1093
IGKTLKIGEDTFEDLDEV+DRY+DPLV+HLK+ML+YRKFRKG+KAEVDELLR+EKAE+P
Sbjct: 1317 RIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKSMLNYRKFRKGTKAEVDELLRMEKAEYP 1376
Query: 1094 TRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHI 1153
RIVY FGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF+FRK+MFEDIDRLVAYFQRHI
Sbjct: 1377 MRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHI 1436
Query: 1154 DDPQGDSAPSIRSVAAMVPMR------------SPANGGSTASAGSGWGGSTNEGGWNRD 1201
DDPQ DSAPSIRSVAAMVPMR GG + S G GW G + + G D
Sbjct: 1437 DDPQHDSAPSIRSVAAMVPMRSPAAGGSSGASVGSGWGGGSNSEGGGWRGHSYDRG---D 1493
Query: 1202 RSSTPGSRTGRNDYRNGGGRDGHPSGLPRPY----GGRGRGRGSNNSNRGNSSNSERQDS 1257
RSSTPGSRTGR +YRN G +D HPSG+PRPY G + +NRG++SN+ERQDS
Sbjct: 1494 RSSTPGSRTGRGEYRNNGNQDEHPSGVPRPYGGGRGRGRGRGRGSYNNRGDNSNNERQDS 1553
Query: 1258 SYDTPKWDSAN-KSGDDSWGNFPGAKAQNPAGREAFP 1293
Y +W S N K DD NFPGAK QN GREAFP
Sbjct: 1554 GYGG-RWGSNNTKDSDDGLSNFPGAKVQNSPGREAFP 1589
>gi|357509195|ref|XP_003624886.1| LCR/BET1 [Medicago truncatula]
gi|355499901|gb|AES81104.1| LCR/BET1 [Medicago truncatula]
Length = 1753
Score = 1915 bits (4962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 973/1357 (71%), Positives = 1118/1357 (82%), Gaps = 43/1357 (3%)
Query: 14 AGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQ 73
G P DG SI +E+ WI QL G +P ++ + S + +L I++ DI+RFL+L H Q
Sbjct: 411 TGAP-DGSSINEETQWIVKQLKHGAVPWIRKKDSSSQNKEQELPINQGDIVRFLELHHGQ 469
Query: 74 KLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLL 133
LDIPFIAMYRKEECLSLLKDLE+ E ++N D +TP LKWHK+LWA+HDLD+KWLLL
Sbjct: 470 SLDIPFIAMYRKEECLSLLKDLERPEAGDENWDKNNKTPILKWHKILWALHDLDRKWLLL 529
Query: 134 QKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNL 193
QKRKSALQ YY KR+EEESRR+YDETRL LN+QLF+S+ +SL+ AE+EREVDDVD KFN+
Sbjct: 530 QKRKSALQLYYNKRFEEESRRVYDETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNV 589
Query: 194 HFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELED 253
HFPPGE GVDEGQYKRPKR + YS+ SKAGLWEVAS+FG SSEQLGL LSL ++ ELED
Sbjct: 590 HFPPGEAGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSSEQLGLCLSLVQL-QELED 648
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
PKETPEE+ASNF CAM+++ + VL+ ARHMAAVEISCEP ++KYVRS F+D+AVVST PT
Sbjct: 649 PKETPEEVASNFTCAMYDTPEEVLKCARHMAAVEISCEPSIKKYVRSHFIDHAVVSTSPT 708
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
DG+ IDSFHQF+GVKWLREKPL KFEDAQWLLIQKAEEEKL+QVTIKLPE+ LNKL
Sbjct: 709 ADGNITIDSFHQFSGVKWLREKPLSKFEDAQWLLIQKAEEEKLIQVTIKLPEEYLNKLID 768
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
E Y+SD VS+SAQLWN+QR+LIL DA FLLPSM KEARS+++ +AK W+LMEYGK
Sbjct: 769 QFNELYISDSVSRSAQLWNEQRKLILHDAFFRFLLPSMEKEARSVLASKAKHWVLMEYGK 828
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCL 493
ALWNKVSVGPYQ+K+ND++ D+EAAPRV+AC WGPG P+TTFVMLDSSGEV DVL+TG L
Sbjct: 829 ALWNKVSVGPYQQKENDLSSDDEAAPRVMACSWGPGNPQTTFVMLDSSGEVQDVLYTGSL 888
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
TLRSQN DQQ KKNDQER+LKFM DHQPHV+VLGA NLSCT LK+DIYE+I+KMVEE+P
Sbjct: 889 TLRSQNANDQQRKKNDQERVLKFMTDHQPHVIVLGAANLSCTRLKEDIYEVIYKMVEENP 948
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQK-GNVKRAVALGRYLQNPLAMVAT 612
RDVGHEMD LSIVYGDE+LPRLYENSRISS+QLP Q+ G V+RAVALGRYLQNPLAMV T
Sbjct: 949 RDVGHEMDGLSIVYGDEALPRLYENSRISSEQLPSQQLGIVRRAVALGRYLQNPLAMVTT 1008
Query: 613 LCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFI 672
LCGP +EILSWKL PLE+FL PD+K GMIEQV+VDVTNQVGLDINLAI EW FAPLQFI
Sbjct: 1009 LCGPRKEILSWKLSPLESFLNPDDKLGMIEQVLVDVTNQVGLDINLAISHEWLFAPLQFI 1068
Query: 673 SGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
SGLGPRKAASLQRSLVRAG+IFTRKDF+T H LGKKVFVNAVGFLRVRRSG AASSSQFI
Sbjct: 1069 SGLGPRKAASLQRSLVRAGSIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFI 1128
Query: 733 DLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDR 792
DLLDDTRIHPESY LAQELA+ VY D D NDD+DALEMAIEHVRDRP LK ++
Sbjct: 1129 DLLDDTRIHPESYILAQELARAVYEEDGTADANDDDDALEMAIEHVRDRPSYLKNLEVEE 1188
Query: 793 HIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQA 852
+ RE+K ET Y I+RELI GFQDWR QY+EPSQDEEFYMISGETE+TLAEG++VQ
Sbjct: 1189 YALANNREDKIETFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQV 1248
Query: 853 TVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNRYQ 911
TVRRVQ Q+AIC LESG+ G+LMKEDY+DDWRD ELSD+LHEGD+LTCKIKSIQKNRYQ
Sbjct: 1249 TVRRVQAQKAICGLESGMTGILMKEDYTDDWRDIIELSDRLHEGDMLTCKIKSIQKNRYQ 1308
Query: 912 VFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCF 971
VFLVC++SEMR++R Q+ Q+LDPYYHE++S SEQ+K RKEKE AKKHFK+R+IVHP F
Sbjct: 1309 VFLVCKDSEMRSDRLQNNQDLDPYYHEDQSCLPSEQDKTRKEKERAKKHFKQRMIVHPRF 1368
Query: 972 QNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKS 1031
QN+TADEAM+ LS K+PGESI RPSSRGPSYLTLTLK+++GVYAHKD++EGGK+HKDI S
Sbjct: 1369 QNITADEAMEFLSDKDPGESIFRPSSRGPSYLTLTLKIHEGVYAHKDLVEGGKEHKDITS 1428
Query: 1032 LVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAE 1091
L+ IGKTLKIGEDTFEDLDEV+DRY+DPLV+HLK ML+YRKFR G+K EVDELL++EKAE
Sbjct: 1429 LLRIGKTLKIGEDTFEDLDEVMDRYVDPLVTHLKTMLNYRKFRTGTKTEVDELLKMEKAE 1488
Query: 1092 FPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQR 1151
P RIVY FGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF+FRK+MFEDIDRLVAYFQR
Sbjct: 1489 CPMRIVYTFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQR 1548
Query: 1152 HIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASA-----GSGWGGSTNEGGWN-RDRSST 1205
HIDDPQ DSAPSIRSVAAMVPMRSPA GGS+A++ G G G N RDRSST
Sbjct: 1549 HIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASVGSGWGGSNGDGGWRGHLNDRDRSST 1608
Query: 1206 PGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQD--SSYDTPK 1263
PGSRTGR PSG+PRPYGG + +NRG+ N+ERQD S + +
Sbjct: 1609 PGSRTGR------------PSGVPRPYGGGRGRGRGSYNNRGH--NNERQDGASGWGSGW 1654
Query: 1264 WDSANKSGDDSWGNFPGAKAQNPAGREAFP-------GGWGSSGGGGSSGW-GGASDGDN 1315
+A K DDS NFPGAK QN GREAFP G G + G SGW GGA+ GD
Sbjct: 1655 GSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWGGGSGWGGGASTGDKSGWGGGANTGDK 1714
Query: 1316 GGWGH--------SSGGADKDSGWGGGGSKRSSDGGW 1344
GWG S+G +SGW G GSK+++D GW
Sbjct: 1715 SGWGGGNGWGGGASTGAEHGNSGW-GSGSKKAADIGW 1750
>gi|224137598|ref|XP_002322597.1| global transcription factor group [Populus trichocarpa]
gi|222867227|gb|EEF04358.1| global transcription factor group [Populus trichocarpa]
Length = 1216
Score = 1886 bits (4885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 915/1141 (80%), Positives = 1015/1141 (88%), Gaps = 13/1141 (1%)
Query: 16 PPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKL 75
PP D SI++ES W+Y+Q+ SGT+PLF + G L I++DD+ RFL+L H+QKL
Sbjct: 88 PPLDDFSILEESNWLYSQIASGTVPLFAKNG---------LFINKDDVTRFLELHHIQKL 138
Query: 76 DIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQK 135
DIPFIAMYRKEECLSLLKD +Q+E +N+N DD ++ PT KWHKVLWAI DLD+KWLLLQK
Sbjct: 139 DIPFIAMYRKEECLSLLKDPDQHE-DNENYDDTDKNPTFKWHKVLWAIQDLDRKWLLLQK 197
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHF 195
RKSAL SYY KR+EEESRRIYDETRL LNQQLF+SI KSL+ AE+EREVDDVD KFNLHF
Sbjct: 198 RKSALNSYYNKRFEEESRRIYDETRLNLNQQLFESILKSLKTAESEREVDDVDAKFNLHF 257
Query: 196 PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
PPGEVG DEGQYKRP R ++YS CSKAGLWEVASKFGYS+EQLG+QLSL KM DEL+D K
Sbjct: 258 PPGEVGADEGQYKRPMRRSQYSICSKAGLWEVASKFGYSAEQLGMQLSLLKM-DELQDAK 316
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
ETPEEMASNF CAMF S Q VL+GARHMAAVEISCEPCVR+YVR IFMDNAVVST PT D
Sbjct: 317 ETPEEMASNFTCAMFESPQTVLKGARHMAAVEISCEPCVRRYVRFIFMDNAVVSTSPTAD 376
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
G++AIDSFHQFAGVKWLREKP++ FEDAQWLLIQKAEEEKLLQVT+KLP+ +++L DC
Sbjct: 377 GNAAIDSFHQFAGVKWLREKPIKMFEDAQWLLIQKAEEEKLLQVTVKLPQKVMDQLIEDC 436
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
YLS GVSK AQLWN+QR LILKDAL FLLPSM KEARSL++ RAK+WLL EYGK L
Sbjct: 437 NGRYLSVGVSKYAQLWNEQRSLILKDALFGFLLPSMEKEARSLLTSRAKNWLLYEYGKVL 496
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTL 495
WNKVSVGPYQRK++D++ D+EAAPRV+ACCWGPGKP TTFVMLDSSGEV+DVL+TG LTL
Sbjct: 497 WNKVSVGPYQRKESDVSMDDEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTL 556
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
RSQNV DQQ KKNDQ+R+LKFM DHQPHVVVLGA +LSCT LKDDIYEIIFKMVEE+PRD
Sbjct: 557 RSQNVNDQQRKKNDQQRVLKFMTDHQPHVVVLGAAHLSCTKLKDDIYEIIFKMVEENPRD 616
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
VGHEMDELS+VYGDESLPRLYENSRISSDQLPGQ G VKRAVALGR LQNPLAMVATLCG
Sbjct: 617 VGHEMDELSVVYGDESLPRLYENSRISSDQLPGQSGIVKRAVALGRCLQNPLAMVATLCG 676
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
P REILSWKL PLENFLTPDEKY +IEQVMVD TNQVGLDINLA EW FAPLQFISGL
Sbjct: 677 PAREILSWKLNPLENFLTPDEKYLVIEQVMVDATNQVGLDINLATSHEWLFAPLQFISGL 736
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
GPRKAASLQRSLVR GAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG AASSSQFID+L
Sbjct: 737 GPRKAASLQRSLVRTGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDVL 796
Query: 736 DDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIK 795
DDTRIHPESYGLAQELAK VY +D NDD+DALEMAIE+VR+RP+LLKT+ D + K
Sbjct: 797 DDTRIHPESYGLAQELAKVVYEKDSGDA-NDDDDALEMAIEYVRERPNLLKTFAFDLYFK 855
Query: 796 EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVR 855
+ KR+NK+ET I+ ELI GFQDWR QYKEP+QDEEFYMISGETEDTLAEGRVVQATVR
Sbjct: 856 DNKRDNKKETFKDIKMELIQGFQDWRKQYKEPTQDEEFYMISGETEDTLAEGRVVQATVR 915
Query: 856 RVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNRYQVFL 914
RV G +AIC LE+GL G+L KEDY+DDWRD ELSDKL E DILTCKIKSIQKNRYQVFL
Sbjct: 916 RVVGGKAICALETGLTGILTKEDYADDWRDIPELSDKLREDDILTCKIKSIQKNRYQVFL 975
Query: 915 VCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNV 974
VC++SEMR+NRY+ QNLD Y+HE++SS +SEQEK RKE+ELAKKHFK R+IVHP FQN+
Sbjct: 976 VCKDSEMRSNRYRQVQNLDLYFHEDQSSMRSEQEKVRKERELAKKHFKPRMIVHPRFQNI 1035
Query: 975 TADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG 1034
TADEAM+ LS K+PGESIIRPSSRGPSYLTLTLKVYDGVYAHKDI+EGGK+HKDI SL+
Sbjct: 1036 TADEAMEFLSDKDPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIVEGGKEHKDITSLLR 1095
Query: 1035 IGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPT 1094
IGKTLKIGED+FEDLDEV+DRY+DPLV HLK+ML+YRKFR G+KAEVDELLRIEK++ PT
Sbjct: 1096 IGKTLKIGEDSFEDLDEVMDRYVDPLVGHLKSMLNYRKFRSGTKAEVDELLRIEKSQQPT 1155
Query: 1095 RIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHID 1154
RIVY FGISHEHPGTFILTYIRSTNPHHEY+GLYPKGFKFRKRMFEDIDRLVAYFQ+HID
Sbjct: 1156 RIVYSFGISHEHPGTFILTYIRSTNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQKHID 1215
Query: 1155 D 1155
D
Sbjct: 1216 D 1216
>gi|145326656|ref|NP_001077775.1| transcription elongation factor SPT6 [Arabidopsis thaliana]
gi|332196253|gb|AEE34374.1| transcription elongation factor SPT6 [Arabidopsis thaliana]
Length = 1642
Score = 1853 bits (4800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 921/1268 (72%), Positives = 1044/1268 (82%), Gaps = 35/1268 (2%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLL 70
++ PP D SI +ES WIY QL S R + +G S+++DDI +FL+L
Sbjct: 280 ESTGSPPVDEISIEEESNWIYAQLASQL------RESDGTFDGRGFSVNKDDIAKFLELH 333
Query: 71 HLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKW 130
H+QKL+IPFIAMYRKE+C SLL + + N + P KWHKV W IHDLDKKW
Sbjct: 334 HVQKLEIPFIAMYRKEQCRSLLDTGDFDGANQG------KKPETKWHKVFWMIHDLDKKW 387
Query: 131 LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLK 190
LLL+KRK AL YY KRYEEESRR+YDETRL LNQ LF+S+ KSL+ AETEREVDDVD K
Sbjct: 388 LLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQYLFESVIKSLKVAETEREVDDVDSK 447
Query: 191 FNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE 250
FNLHFPPGE+GVDEGQYKRPKR ++YS CSKAGLWEVA+KFGYS+EQLGL LSLEK+ DE
Sbjct: 448 FNLHFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYSAEQLGLALSLEKLVDE 507
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
LED KETPEEMA NF CAMF +S AVL+GARHMAAVEISCEP V+KYVR I+M+NAVVST
Sbjct: 508 LEDAKETPEEMAKNFVCAMFENSLAVLKGARHMAAVEISCEPSVKKYVRGIYMENAVVST 567
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
PT DG++ IDSFHQF+G+KWLREKPL KFE AQWLLIQK EEEKLLQVT KLPE+ +N+
Sbjct: 568 SPTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYMNR 627
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
L SDC EHYLS GVSK AQLWN+QR+LIL+DAL FLLPSM KEARSL++ RAKS LL E
Sbjct: 628 LISDCNEHYLSVGVSKYAQLWNEQRKLILEDALHAFLLPSMEKEARSLLTSRAKSRLLSE 687
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFT 490
YG+ALWNKVS GPYQ+K+ DI DEEAAPRV+ACCWGPGKP TFVMLDSSGEV+DVL+
Sbjct: 688 YGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPNTFVMLDSSGEVLDVLYA 747
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
G LT RSQNV DQQ KK+DQ+R+LKFMMDHQPHVV LGAVNLSCT LKDDIYE+IF+MVE
Sbjct: 748 GSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQMVE 807
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E PRDVGH MD+LSIVY DESLPRLYENSRIS +QLP Q GNV+RAVALGRYLQNPLAMV
Sbjct: 808 EKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGNVRRAVALGRYLQNPLAMV 867
Query: 611 ATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
ATLCGPGREILSWKL PLENFL DEKYGM+EQVMVD+TNQVG+DINLA +W F+PLQ
Sbjct: 868 ATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMVDITNQVGIDINLAASHDWFFSPLQ 927
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
FISGLGPRKAASLQRSLVRAG+IF RKD + HGLGKKVFVNA GFLR+RRSG AASSSQ
Sbjct: 928 FISGLGPRKAASLQRSLVRAGSIFVRKDLIM-HGLGKKVFVNAAGFLRIRRSGLAASSSQ 986
Query: 731 FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
FIDLLDDTRIHPESY LAQELAK++Y+ D+ GD NDDEDA+EMAIEHVRDRP L+ +L
Sbjct: 987 FIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVL 1046
Query: 791 DRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
D ++ KKRENK+ET I REL GFQDWR +KEPS DEEFYMISGETEDT+AEGR+V
Sbjct: 1047 DEYLASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIV 1106
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNR 909
QA+VRR+Q RAICVL+SGL GMLMKED+SDD RD +L+D+L EGDILTCKIKSIQK R
Sbjct: 1107 QASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQR 1166
Query: 910 YQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHP 969
YQVFL+C+ESEMRNNR+QH QN+D YYHE+R+S Q +EKARKEKEL +KHFK R+IVHP
Sbjct: 1167 YQVFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKARKEKELVRKHFKSRMIVHP 1226
Query: 970 CFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDI 1029
FQN+TAD+A + LS K+ GESI+RPSSRG ++LTLTLK+YDGVYAHK+I EGGK++KDI
Sbjct: 1227 RFQNITADQATEYLSDKDFGESIVRPSSRGLNFLTLTLKIYDGVYAHKEIAEGGKENKDI 1286
Query: 1030 KSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEK 1089
SL IGKTL IGEDTFEDLDEV+DRY+DPLVSHLK ML+YRKFRKG+K+EVD+LLRIEK
Sbjct: 1287 TSLQCIGKTLTIGEDTFEDLDEVMDRYVDPLVSHLKTMLNYRKFRKGTKSEVDDLLRIEK 1346
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1149
E P+RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF
Sbjct: 1347 GENPSRIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1406
Query: 1150 QRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSR 1209
QRHIDDP +SAPSIRS+AA VPMRSPA+ GS+ +G G S N DRS GS
Sbjct: 1407 QRHIDDPLQESAPSIRSIAAKVPMRSPADHGSSGGSGWGSSQSEGGWKGNSDRS---GSG 1463
Query: 1210 TGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYDTPKWDSANK 1269
G +YRNGGGRDGHPSG PRPY G R + NS+RQD
Sbjct: 1464 RG-GEYRNGGGRDGHPSGAPRPY---GGRGRGRGRGRRDDMNSDRQD------------- 1506
Query: 1270 SGDDSWGN 1277
G+ WGN
Sbjct: 1507 -GNGDWGN 1513
>gi|42562972|ref|NP_176723.3| transcription elongation factor SPT6 [Arabidopsis thaliana]
gi|332196252|gb|AEE34373.1| transcription elongation factor SPT6 [Arabidopsis thaliana]
Length = 1647
Score = 1849 bits (4790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 918/1251 (73%), Positives = 1041/1251 (83%), Gaps = 21/1251 (1%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLL 70
++ PP D SI +ES WIY QL S R + +G S+++DDI +FL+L
Sbjct: 280 ESTGSPPVDEISIEEESNWIYAQLASQL------RESDGTFDGRGFSVNKDDIAKFLELH 333
Query: 71 HLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKW 130
H+QKL+IPFIAMYRKE+C SLL + + N + P KWHKV W IHDLDKKW
Sbjct: 334 HVQKLEIPFIAMYRKEQCRSLLDTGDFDGANQG------KKPETKWHKVFWMIHDLDKKW 387
Query: 131 LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLK 190
LLL+KRK AL YY KRYEEESRR+YDETRL LNQ LF+S+ KSL+ AETEREVDDVD K
Sbjct: 388 LLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQYLFESVIKSLKVAETEREVDDVDSK 447
Query: 191 FNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE 250
FNLHFPPGE+GVDEGQYKRPKR ++YS CSKAGLWEVA+KFGYS+EQLGL LSLEK+ DE
Sbjct: 448 FNLHFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYSAEQLGLALSLEKLVDE 507
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
LED KETPEEMA NF CAMF +S AVL+GARHMAAVEISCEP V+KYVR I+M+NAVVST
Sbjct: 508 LEDAKETPEEMAKNFVCAMFENSLAVLKGARHMAAVEISCEPSVKKYVRGIYMENAVVST 567
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
PT DG++ IDSFHQF+G+KWLREKPL KFE AQWLLIQK EEEKLLQVT KLPE+ +N+
Sbjct: 568 SPTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYMNR 627
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
L SDC EHYLS GVSK AQLWN+QR+LIL+DAL FLLPSM KEARSL++ RAKS LL E
Sbjct: 628 LISDCNEHYLSVGVSKYAQLWNEQRKLILEDALHAFLLPSMEKEARSLLTSRAKSRLLSE 687
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFT 490
YG+ALWNKVS GPYQ+K+ DI DEEAAPRV+ACCWGPGKP TFVMLDSSGEV+DVL+
Sbjct: 688 YGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPNTFVMLDSSGEVLDVLYA 747
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
G LT RSQNV DQQ KK+DQ+R+LKFMMDHQPHVV LGAVNLSCT LKDDIYE+IF+MVE
Sbjct: 748 GSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQMVE 807
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E PRDVGH MD+LSIVY DESLPRLYENSRIS +QLP Q GNV+RAVALGRYLQNPLAMV
Sbjct: 808 EKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGNVRRAVALGRYLQNPLAMV 867
Query: 611 ATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
ATLCGPGREILSWKL PLENFL DEKYGM+EQVMVD+TNQVG+DINLA +W F+PLQ
Sbjct: 868 ATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMVDITNQVGIDINLAASHDWFFSPLQ 927
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
FISGLGPRKAASLQRSLVRAG+IF RKD + HGLGKKVFVNA GFLR+RRSG AASSSQ
Sbjct: 928 FISGLGPRKAASLQRSLVRAGSIFVRKDLIM-HGLGKKVFVNAAGFLRIRRSGLAASSSQ 986
Query: 731 FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
FIDLLDDTRIHPESY LAQELAK++Y+ D+ GD NDDEDA+EMAIEHVRDRP L+ +L
Sbjct: 987 FIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVL 1046
Query: 791 DRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
D ++ KKRENK+ET I REL GFQDWR +KEPS DEEFYMISGETEDT+AEGR+V
Sbjct: 1047 DEYLASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIV 1106
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNR 909
QA+VRR+Q RAICVL+SGL GMLMKED+SDD RD +L+D+L EGDILTCKIKSIQK R
Sbjct: 1107 QASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQR 1166
Query: 910 YQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHP 969
YQVFL+C+ESEMRNNR+QH QN+D YYHE+R+S Q +EKARKEKEL +KHFK R+IVHP
Sbjct: 1167 YQVFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKARKEKELVRKHFKSRMIVHP 1226
Query: 970 CFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDI 1029
FQN+TAD+A + LS K+ GESI+RPSSRG ++LTLTLK+YDGVYAHK+I EGGK++KDI
Sbjct: 1227 RFQNITADQATEYLSDKDFGESIVRPSSRGLNFLTLTLKIYDGVYAHKEIAEGGKENKDI 1286
Query: 1030 KSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEK 1089
SL IGKTL IGEDTFEDLDEV+DRY+DPLVSHLK ML+YRKFRKG+K+EVD+LLRIEK
Sbjct: 1287 TSLQCIGKTLTIGEDTFEDLDEVMDRYVDPLVSHLKTMLNYRKFRKGTKSEVDDLLRIEK 1346
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1149
E P+RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF
Sbjct: 1347 GENPSRIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1406
Query: 1150 QRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSR 1209
QRHIDDP +SAPSIRS+AA VPMRSPA+ GS+ +G G S N DRS GS
Sbjct: 1407 QRHIDDPLQESAPSIRSIAAKVPMRSPADHGSSGGSGWGSSQSEGGWKGNSDRS---GSG 1463
Query: 1210 TGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYD 1260
G +YRNGGGRDGHPSG PRPY G R + NS+RQD + D
Sbjct: 1464 RG-GEYRNGGGRDGHPSGAPRPY---GGRGRGRGRGRRDDMNSDRQDGNGD 1510
>gi|334183649|ref|NP_001185317.1| transcription elongation factor SPT6 [Arabidopsis thaliana]
gi|332196254|gb|AEE34375.1| transcription elongation factor SPT6 [Arabidopsis thaliana]
Length = 1454
Score = 1819 bits (4711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 887/1200 (73%), Positives = 1007/1200 (83%), Gaps = 32/1200 (2%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLL 70
++ PP D SI +ES WIY QL S R + +G S+++DDI +FL+L
Sbjct: 251 ESTGSPPVDEISIEEESNWIYAQLASQL------RESDGTFDGRGFSVNKDDIAKFLELH 304
Query: 71 HLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKW 130
H+QKL+IPFIAMYRKE+C SLL + + N + P KWHKV W IHDLDKKW
Sbjct: 305 HVQKLEIPFIAMYRKEQCRSLLDTGDFDGANQG------KKPETKWHKVFWMIHDLDKKW 358
Query: 131 LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLK 190
LLL+KRK AL YY KRYEEESRR+YDETRL LNQ LF+S+ KSL+ AETEREVDDVD K
Sbjct: 359 LLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQYLFESVIKSLKVAETEREVDDVDSK 418
Query: 191 FNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE 250
FNLHFPPGE+GVDEGQYKRPKR ++YS CSKAGLWEVA+KFGYS+EQLGL LSLEK+ DE
Sbjct: 419 FNLHFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYSAEQLGLALSLEKLVDE 478
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
LED KETPEEMA NF CAMF +S AVL+GARHMAAVEISCEP V+KYVR I+M+NAVVST
Sbjct: 479 LEDAKETPEEMAKNFVCAMFENSLAVLKGARHMAAVEISCEPSVKKYVRGIYMENAVVST 538
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
PT DG++ IDSFHQF+G+KWLREKPL KFE AQWLLIQK EEEKLLQVT KLPE+ +N+
Sbjct: 539 SPTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYMNR 598
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
L SDC EHYLS GVSK AQLWN+QR+LIL+DAL FLLPSM KEARSL++ RAKS LL E
Sbjct: 599 LISDCNEHYLSVGVSKYAQLWNEQRKLILEDALHAFLLPSMEKEARSLLTSRAKSRLLSE 658
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFT 490
YG+ALWNKVS GPYQ+K+ DI DEEAAPRV+ACCWGPGKP TFVMLDSSGEV+DVL+
Sbjct: 659 YGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPNTFVMLDSSGEVLDVLYA 718
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
G LT RSQNV DQQ KK+DQ+R+LKFMMDHQPHVV LGAVNLSCT LKDDIYE+IF+MVE
Sbjct: 719 GSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQMVE 778
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E PRDVGH MD+LSIVY DESLPRLYENSRIS +QLP Q GNV+RAVALGRYLQNPLAMV
Sbjct: 779 EKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGNVRRAVALGRYLQNPLAMV 838
Query: 611 ATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
ATLCGPGREILSWKL PLENFL DEKYGM+EQVMVD+TNQVG+DINLA +W F+PLQ
Sbjct: 839 ATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMVDITNQVGIDINLAASHDWFFSPLQ 898
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
FISGLGPRKAASLQRSLVRAG+IF RKD + HGLGKKVFVNA GFLR+RRSG AASSSQ
Sbjct: 899 FISGLGPRKAASLQRSLVRAGSIFVRKDLIM-HGLGKKVFVNAAGFLRIRRSGLAASSSQ 957
Query: 731 FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
FIDLLDDTRIHPESY LAQELAK++Y+ D+ GD NDDEDA+EMAIEHVRDRP L+ +L
Sbjct: 958 FIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVL 1017
Query: 791 DRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
D ++ KKRENK+ET I REL GFQDWR +KEPS DEEFYMISGETEDT+AEGR+V
Sbjct: 1018 DEYLASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIV 1077
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNR 909
QA+VRR+Q RAICVL+SGL GMLMKED+SDD RD +L+D+L EGDILTCKIKSIQK R
Sbjct: 1078 QASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQR 1137
Query: 910 YQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHP 969
YQVFL+C+ESEMRNNR+QH QN+D YYHE+R+S Q +EKARKEKEL +KHFK R+IVHP
Sbjct: 1138 YQVFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKARKEKELVRKHFKSRMIVHP 1197
Query: 970 CFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDI 1029
FQN+TAD+A + LS K+ GESI+RPSSRG ++LTLTLK+YDGVYAHK+I EGGK++KDI
Sbjct: 1198 RFQNITADQATEYLSDKDFGESIVRPSSRGLNFLTLTLKIYDGVYAHKEIAEGGKENKDI 1257
Query: 1030 KSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEK 1089
SL IGKTL IGEDTFEDLDEV+DRY+DPLVSHLK ML+YRKFRKG+K+EVD+LLRIEK
Sbjct: 1258 TSLQCIGKTLTIGEDTFEDLDEVMDRYVDPLVSHLKTMLNYRKFRKGTKSEVDDLLRIEK 1317
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1149
E P+RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF
Sbjct: 1318 GENPSRIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1377
Query: 1150 QRHIDDPQGDSAPSIRSVAAMVPMRSPAN------------------GGSTASAGSGWGG 1191
QRHIDDP +SAPSIRS+AA VPMRSPA+ G++ +GSG GG
Sbjct: 1378 QRHIDDPLQESAPSIRSIAAKVPMRSPADHGSSGGSGWGSSQSEGGWKGNSDRSGSGRGG 1437
>gi|3335349|gb|AAC27151.1| Similar to gb|U46691 putative chromatin structure regulator (SUPT6H)
from Homo sapiens. ESTs gb|T42908, gb|AA586170 and
gb|AA395125 come from this gene [Arabidopsis thaliana]
Length = 1684
Score = 1796 bits (4652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 902/1253 (71%), Positives = 1023/1253 (81%), Gaps = 42/1253 (3%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLL 70
++ PP D SI +ES WIY QL S R + +G S+++DDI +FL+L
Sbjct: 334 ESTGSPPVDEISIEEESNWIYAQLASQL------RESDGTFDGRGFSVNKDDIAKFLELH 387
Query: 71 HLQKLDI--PFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDK 128
H+QKL++ F MYRKE+C SLL + + N + P KWHKV W IHDLDK
Sbjct: 388 HVQKLEVLDSFSPMYRKEQCRSLLDTGDFDGANQG------KKPETKWHKVFWMIHDLDK 441
Query: 129 KWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD 188
KWLLL+KRK AL YY KRYEEESRR+YDETRL LNQ LF+S+ KSL+ AETEREVDDVD
Sbjct: 442 KWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQYLFESVIKSLKVAETEREVDDVD 501
Query: 189 LKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG 248
KFNLHFPPGE+GVDEGQYKRPKR ++YS CSKAGLWEVA+KFGYS+EQLGL LSLEK+
Sbjct: 502 SKFNLHFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYSAEQLGLALSLEKLV 561
Query: 249 DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV 308
DELED KETPEEMA NF CAMF +S AVL+GARHMAAVEISCEP V+KYVR I+M+NAVV
Sbjct: 562 DELEDAKETPEEMAKNFVCAMFENSLAVLKGARHMAAVEISCEPSVKKYVRGIYMENAVV 621
Query: 309 STCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL 368
ST PT DG++ IDSFHQF+G+KWLREKPL KFE AQWLLIQK EEEKLLQVT KLPE+ +
Sbjct: 622 STSPTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYM 681
Query: 369 NKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLL 428
N+L SDC EHYLS GVSK AQLWN+QR+LIL+DAL FLLPSM KEARSL++ RAKS LL
Sbjct: 682 NRLISDCNEHYLSVGVSKYAQLWNEQRKLILEDALHAFLLPSMEKEARSLLTSRAKSRLL 741
Query: 429 MEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVL 488
EYG+ALWNKVS GPYQ+K+ DI DEEAAPRV+ACCWGPGKP TFVMLDSSGEV+DVL
Sbjct: 742 SEYGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPNTFVMLDSSGEVLDVL 801
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
+ G LT RSQNV DQQ KK+DQ+R+LKFMMDHQPHVV LGAVNLSCT LKDDIYE+IF+M
Sbjct: 802 YAGSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQM 861
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
VEE PRDVGH MD+LSIVY DESLPRLYENSRIS +QLP Q GNV+RAVALGRYLQNPLA
Sbjct: 862 VEEKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGNVRRAVALGRYLQNPLA 921
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
MVATLCGPGREILSWKL PLENFL DEKYGM+EQVMVD+TN
Sbjct: 922 MVATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMVDITN------------------ 963
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
QFISGLGPRKAASLQRSLVRAG+IF RKD + HGLGKKVFVNA GFLR+RRSG AASS
Sbjct: 964 -QFISGLGPRKAASLQRSLVRAGSIFVRKDLIM-HGLGKKVFVNAAGFLRIRRSGLAASS 1021
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTY 788
SQFIDLLDDTRIHPESY LAQELAK++Y+ D+ GD NDDEDA+EMAIEHVRDRP L+
Sbjct: 1022 SQFIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKV 1081
Query: 789 LLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGR 848
+LD ++ KKRENK+ET I REL GFQDWR +KEPS DEEFYMISGETEDT+AEGR
Sbjct: 1082 VLDEYLASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEEFYMISGETEDTIAEGR 1141
Query: 849 VVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQK 907
+VQA+VRR+Q RAICVL+SGL GMLMKED+SDD RD +L+D+L EGDILTCKIKSIQK
Sbjct: 1142 IVQASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLADQLKEGDILTCKIKSIQK 1201
Query: 908 NRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIV 967
RYQVFL+C+ESEMRNNR+QH QN+D YYHE+R+S Q +EKARKEKEL +KHFK R+IV
Sbjct: 1202 QRYQVFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKARKEKELVRKHFKSRMIV 1261
Query: 968 HPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHK 1027
HP FQN+TAD+A + LS K+ GESI+RPSSRG ++LTLTLK+YDGVYAHK+I EGGK++K
Sbjct: 1262 HPRFQNITADQATEYLSDKDFGESIVRPSSRGLNFLTLTLKIYDGVYAHKEIAEGGKENK 1321
Query: 1028 DIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRI 1087
DI SL IGKTL IGEDTFEDLDEV+DRY+DPLVSHLK ML+YRKFRKG+K+EVD+LLRI
Sbjct: 1322 DITSLQCIGKTLTIGEDTFEDLDEVMDRYVDPLVSHLKTMLNYRKFRKGTKSEVDDLLRI 1381
Query: 1088 EKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVA 1147
EK E P+RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVA
Sbjct: 1382 EKGENPSRIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVA 1441
Query: 1148 YFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPG 1207
YFQRHIDDP +SAPSIRS+AA VPMRSPA+ GS+ +G G S N DRS G
Sbjct: 1442 YFQRHIDDPLQESAPSIRSIAAKVPMRSPADHGSSGGSGWGSSQSEGGWKGNSDRS---G 1498
Query: 1208 SRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYD 1260
S G +YRNGGGRDGHPSG PRPY G R + NS+RQD + D
Sbjct: 1499 SGRG-GEYRNGGGRDGHPSGAPRPY---GGRGRGRGRGRRDDMNSDRQDGNGD 1547
>gi|449529636|ref|XP_004171804.1| PREDICTED: transcription elongation factor SPT6-like, partial
[Cucumis sativus]
Length = 1322
Score = 1574 bits (4076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 769/975 (78%), Positives = 852/975 (87%), Gaps = 11/975 (1%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLL 70
++ PPTD S+ DE++WI+ + +G L S G DLS+++DDI+R+LDL+
Sbjct: 280 ESTGSPPTDDASLDDEASWIHGHIANGVSSL------SSNASGQDLSVTKDDILRYLDLV 333
Query: 71 HLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKW 130
H+QKLDIPFI+MYRKEE LSLLKD E D+ D ++ PTL+WHK+LWAI DLDKKW
Sbjct: 334 HVQKLDIPFISMYRKEEILSLLKDTEHE--AGDDQDKNDKAPTLRWHKLLWAIQDLDKKW 391
Query: 131 LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLK 190
LLLQKRK ALQSYYK RY EE R TR LN+QLFDS+++SLEAAE+EREVDDVD K
Sbjct: 392 LLLQKRKKALQSYYKNRYLEEIRTAEHVTRTTLNRQLFDSVNRSLEAAESEREVDDVDSK 451
Query: 191 FNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM-GD 249
FNLHFPPGEVGVDEGQ+KRPKR + YS CSKAGLWEVA KFGYSSEQ GLQLSLEKM D
Sbjct: 452 FNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRND 511
Query: 250 ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
ELEDPKETPEEMASNF CAMF S QAVL+GARHMAA+EISCEPCVRK+VRS FMD AV+S
Sbjct: 512 ELEDPKETPEEMASNFTCAMFESPQAVLKGARHMAAIEISCEPCVRKHVRSYFMDYAVIS 571
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
T PT DG+ AIDSFHQF+ VKWLREKPL +FEDAQWLLIQKAEEEKLL VT+KLPE LN
Sbjct: 572 TSPTADGNVAIDSFHQFSVVKWLREKPLNRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLN 631
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
KL SD E+YLSDGVSKSAQLWN+QR+LIL+DAL FLLPSM KEARSLM+ +AK WLLM
Sbjct: 632 KLISDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLM 691
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLF 489
EYGK LW+KVS+GPYQ K+NDI+ DEEAAPRV+ACCWGPGKP TTFVMLDSSGEV+DVL+
Sbjct: 692 EYGKNLWSKVSIGPYQHKENDISSDEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLY 751
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
TG LTLRSQNV DQQ KKNDQER+LKFM DHQPHVVVLGAVNLSCT LKDDIYEIIFKMV
Sbjct: 752 TGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMV 811
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
EE+PRDVGHEMD LSIVYGDE+LPRLYENSRISSDQL GQ G VKRAVALGRYLQNPLAM
Sbjct: 812 EENPRDVGHEMDGLSIVYGDEALPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAM 871
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
VATLCGPGREILSWKL PLENFLTPDEKYGM+EQVMVDVTNQVGLD NLAI EW F+PL
Sbjct: 872 VATLCGPGREILSWKLNPLENFLTPDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPL 931
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
QFI+GLGPRKAASLQRSLVRAG+IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG AASSS
Sbjct: 932 QFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSS 991
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYL 789
QFIDLLDDTRIHPESY LAQELAK+V++ D++GD NDDEDA EMAIEHVRDRP LL+T
Sbjct: 992 QFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDA-EMAIEHVRDRPHLLRTLD 1050
Query: 790 LDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
+D + K KKRE+K ET I+REL+ GFQDWR QY+EPSQDEEFYMISGETEDTLAEGR+
Sbjct: 1051 VDEYAKSKKREDKIETFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRI 1110
Query: 850 VQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKN 908
VQATVR+V GQ+AIC LESGL GMLMKEDY+DD RD S+LSD+L EGDI+TCKIKSIQKN
Sbjct: 1111 VQATVRKVLGQKAICGLESGLTGMLMKEDYADDSRDISDLSDRLREGDIVTCKIKSIQKN 1170
Query: 909 RYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVH 968
RYQVFLVC+ESEMR+NR+Q QNLDPYYHE+RSS QSEQEK+RKEKELAKKHFK R+IVH
Sbjct: 1171 RYQVFLVCKESEMRSNRHQITQNLDPYYHEDRSSLQSEQEKSRKEKELAKKHFKPRMIVH 1230
Query: 969 PCFQNVTADEAMKLL 983
P FQN+TADEAM+ L
Sbjct: 1231 PRFQNITADEAMEAL 1245
>gi|222632083|gb|EEE64215.1| hypothetical protein OsJ_19048 [Oryza sativa Japonica Group]
Length = 1637
Score = 1533 bits (3970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 754/1179 (63%), Positives = 937/1179 (79%), Gaps = 24/1179 (2%)
Query: 9 LRKALAG-PPTDGESIVDESTWIYNQLL-SGTLPLFGQRGAGSPKEGHDLSISRDDIMRF 66
L + L G PPTD I +ES WI++QL G L F E + I + DI
Sbjct: 297 LSEELTGYPPTDTTMIEEESVWIHSQLTGDGFLSFFNN-------EHVNKDIDQKDIASV 349
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L +LH+ K +IPFIAMYRKE C SLLKDL+ NE N+ + D E + WHK+LWA+ L
Sbjct: 350 LTMLHVNKFEIPFIAMYRKENCPSLLKDLDANEQTNEEHSDEEDQRKMMWHKMLWAVQTL 409
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
DKKWLLLQKRK AL+ YY KR+++E+RRI D TR ALN+QL+ SI ++L+ A++E+EV+D
Sbjct: 410 DKKWLLLQKRKVALEMYYDKRFDDENRRIDDVTRQALNRQLYSSIIEALKDAKSEKEVED 469
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK 246
VD KFNLHFPPGEV +EGQ+KRPKR + YS C KAGLW+VA++FG S+EQLG L+L K
Sbjct: 470 VDAKFNLHFPPGEVE-EEGQFKRPKRKSLYSICHKAGLWQVANQFGRSAEQLGHHLTLTK 528
Query: 247 MGD--ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMD 304
+ + EL+ K++PEE+A+NF CAMF + Q VL+GARHMAAVEI CEP VRK++RSIFM+
Sbjct: 529 IPEAGELDSGKDSPEEVAANFTCAMFETPQDVLRGARHMAAVEIGCEPIVRKHIRSIFMN 588
Query: 305 NAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP 364
AVVSTCPT +G+ ID +HQ +GVKWLR+KPL KF DAQWLLIQKAEEEKLL+VTIKLP
Sbjct: 589 KAVVSTCPTAEGNLIIDPYHQLSGVKWLRDKPLNKFVDAQWLLIQKAEEEKLLKVTIKLP 648
Query: 365 EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
ED+ +L S+ +E+YLSD VSKSAQLW++QR++IL DA NFLLPSM KEARSL++ +AK
Sbjct: 649 EDAKKELMSEARENYLSDCVSKSAQLWDEQRKMILDDAFFNFLLPSMEKEARSLLTAKAK 708
Query: 425 SWLLMEYGKALWNKVSVGPYQRKDNDITP-----DEEAAPRVLACCWGPGKPETTFVMLD 479
+WL MEYGK LWNKVSV P+++KD D D+E+ RV+ACCWGPGKP TTFVMLD
Sbjct: 709 NWLNMEYGKQLWNKVSVAPWKKKDADKKDSDIDLDDESELRVMACCWGPGKPATTFVMLD 768
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
SSGE+VDVL+ G +++RSQ V +QQ KKNDQ+R+LKFM DHQPHVV +GA N +C LKD
Sbjct: 769 SSGELVDVLYAGSISIRSQGVAEQQRKKNDQQRVLKFMTDHQPHVVCVGASNYNCRQLKD 828
Query: 540 DIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVAL 599
DIYE+IFK+VE+HPRDV +M+ SIVYGDES+PRLYENSRISSDQLPGQ G VKRAVAL
Sbjct: 829 DIYEVIFKIVEDHPRDVNPQMENFSIVYGDESVPRLYENSRISSDQLPGQSGIVKRAVAL 888
Query: 600 GRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLA 659
GRYLQNPLAM ATLCGPG+EILSWKL PLE FLTPDEKY ++EQ+MVD TNQ+G D+NLA
Sbjct: 889 GRYLQNPLAMAATLCGPGKEILSWKLHPLEQFLTPDEKYEVVEQIMVDATNQIGFDVNLA 948
Query: 660 IHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRV 719
EW F+ LQF++GLGPRKA++LQ+ L+R G+IF+RKD V LG+KVF+NA GFLRV
Sbjct: 949 ASHEWHFSTLQFVAGLGPRKASALQKELLREGSIFSRKDLVKP--LGRKVFMNASGFLRV 1006
Query: 720 RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND-DEDALEMAIEHV 778
RRSG AA+S+Q IDLL+DTRIHPESY LA+ LAK+V+ + + N+ D+D EMAIEHV
Sbjct: 1007 RRSGGAAASAQIIDLLEDTRIHPESYALAKTLAKDVFAEEAPHEANEMDDDEQEMAIEHV 1066
Query: 779 RDRPDLLKTYLLDRHIKEKKRE--NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMI 836
R++P LK+ + ++K E NK +TL I+ EL+ GF DWR Y EP+ DEEF+M+
Sbjct: 1067 REKPRYLKSLDIREYMKSMPEEFHNKEQTLKDIKWELLCGFPDWRTPYAEPTPDEEFWML 1126
Query: 837 SGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGD 896
SGETEDT+++GR+VQ TVR +Q R IC +SGL ++M ++YSD+ D E + +LHEGD
Sbjct: 1127 SGETEDTISDGRIVQVTVRSIQDNRIICTFDSGLKAIVMADNYSDEGFDLE-TLQLHEGD 1185
Query: 897 ILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKEL 956
+LT KIK++ KNR+ V+L C+ SE+R R N DPY HE+ + Q+EQ+K RK+KEL
Sbjct: 1186 VLTGKIKNVNKNRFMVYLTCKASELR-RRPLSRGNHDPYNHEQDMTSQNEQDKLRKQKEL 1244
Query: 957 AKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAH 1016
AKKHFK R+IVHP FQN+TA+EAM+ LS KEPGE +IRPSSRGPS+LTLTLK++DGV AH
Sbjct: 1245 AKKHFKPRMIVHPHFQNLTAEEAMQFLSDKEPGEKVIRPSSRGPSFLTLTLKIFDGVLAH 1304
Query: 1017 KDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKG 1076
K+I EGGKDHKDI SL+ +GKTL I +TFEDLDEV+DRY+DPLV HLK+ML YRKF+KG
Sbjct: 1305 KEITEGGKDHKDITSLLRLGKTLTIDNETFEDLDEVIDRYVDPLVGHLKSMLLYRKFKKG 1364
Query: 1077 SKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRK 1136
SK+EVDE+LR EK+E P RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKGF+FRK
Sbjct: 1365 SKSEVDEMLRAEKSENPMRIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKGFRFRK 1424
Query: 1137 RMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRS 1175
R F++IDRLV+YFQ+HID P D+ PS+R+VAAMVPM+S
Sbjct: 1425 RDFDNIDRLVSYFQKHIDKPPPDAGPSMRNVAAMVPMKS 1463
>gi|125552834|gb|EAY98543.1| hypothetical protein OsI_20456 [Oryza sativa Indica Group]
Length = 1627
Score = 1532 bits (3966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/1179 (63%), Positives = 937/1179 (79%), Gaps = 24/1179 (2%)
Query: 9 LRKALAG-PPTDGESIVDESTWIYNQLL-SGTLPLFGQRGAGSPKEGHDLSISRDDIMRF 66
L + L G PPTD I +ES WI++QL G L F E + I + DI
Sbjct: 297 LSEELTGYPPTDTTMIEEESVWIHSQLTGDGFLSFFNN-------EHVNKDIDQKDIASV 349
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L +LH+ K +IPFIAMYRKE C SLLKDL+ NE N+ + D E + WHK+LWA+ L
Sbjct: 350 LTMLHVNKFEIPFIAMYRKENCPSLLKDLDANEQTNEEHSDEEDQRKMMWHKMLWAVQTL 409
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
DKKWLLLQKRK AL+ YY KR+++E+RRI D TR ALN+QL+ SI ++L+ A++E+EV+D
Sbjct: 410 DKKWLLLQKRKVALEMYYDKRFDDENRRIDDVTRQALNRQLYSSIIEALKDAKSEKEVED 469
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK 246
VD KFNLHFPPGEV +EGQ+KRPKR + YS C KAGLW+VA++FG S+EQLG L+L K
Sbjct: 470 VDAKFNLHFPPGEVE-EEGQFKRPKRKSLYSICHKAGLWQVANQFGRSAEQLGHHLTLTK 528
Query: 247 MGD--ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMD 304
+ + EL+ K++PEE+A+NF CAMF + Q VL+GARHMAAVEI CEP VRK++RSIFM+
Sbjct: 529 IPEAGELDSGKDSPEEVAANFTCAMFETPQDVLRGARHMAAVEIGCEPIVRKHIRSIFMN 588
Query: 305 NAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP 364
AVVSTCPT +G+ ID +HQ +GVKWLR+KPL KF DAQW+LIQKAEEEKLL+VTIKLP
Sbjct: 589 KAVVSTCPTAEGNLIIDPYHQLSGVKWLRDKPLNKFVDAQWVLIQKAEEEKLLKVTIKLP 648
Query: 365 EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
ED+ +L S+ +E+YLSD VSKSAQLW++QR++IL DA NFLLPSM KEARSL++ +AK
Sbjct: 649 EDAKKELMSEARENYLSDCVSKSAQLWDEQRKMILDDAFFNFLLPSMEKEARSLLTAKAK 708
Query: 425 SWLLMEYGKALWNKVSVGPYQRKDNDITP-----DEEAAPRVLACCWGPGKPETTFVMLD 479
+WL MEYGK LWNKVSV P+++KD D D+E+ RV+ACCWGPGKP TTFVMLD
Sbjct: 709 NWLNMEYGKQLWNKVSVAPWKKKDADKKDSDIDLDDESELRVMACCWGPGKPATTFVMLD 768
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
SSGE+VDVL+ G +++RSQ V +QQ KKNDQ+R+LKFM DHQPHVV +GA N +C LKD
Sbjct: 769 SSGELVDVLYAGSISIRSQGVAEQQRKKNDQQRVLKFMTDHQPHVVCVGASNYNCRQLKD 828
Query: 540 DIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVAL 599
DIYE+IFK+VE+HPRDV +M+ SIVYGDES+PRLYENSRISSDQLPGQ G VKRAVAL
Sbjct: 829 DIYEVIFKIVEDHPRDVNPQMENFSIVYGDESVPRLYENSRISSDQLPGQSGIVKRAVAL 888
Query: 600 GRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLA 659
GRYLQNPLAM ATLCGPG+EILSWKL PLE FLTPDEKY ++EQ+MVD TNQ+G D+NLA
Sbjct: 889 GRYLQNPLAMAATLCGPGKEILSWKLHPLEQFLTPDEKYEVVEQIMVDATNQIGFDVNLA 948
Query: 660 IHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRV 719
EW F+ LQF++GLGPRKA++LQ+ L+R G+IF+RKD V LG+KVF+NA GFLRV
Sbjct: 949 ASHEWHFSTLQFVAGLGPRKASALQKELLREGSIFSRKDLVKP--LGRKVFMNASGFLRV 1006
Query: 720 RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND-DEDALEMAIEHV 778
RRSG AA+S+Q IDLL+DTRIHPESY LA+ LAK+V+ + + N+ D+D EMAIEHV
Sbjct: 1007 RRSGGAAASAQIIDLLEDTRIHPESYALAKTLAKDVFAEEAPHEANEMDDDEQEMAIEHV 1066
Query: 779 RDRPDLLKTYLLDRHIKEKKRE--NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMI 836
R++P LK+ + ++K E NK +TL I+ EL+ GF DWR Y EP+ DEEF+M+
Sbjct: 1067 REKPRYLKSLDIREYMKSMPEEFHNKEQTLKDIKWELLCGFPDWRTPYAEPTPDEEFWML 1126
Query: 837 SGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGD 896
SGETEDT+++GR+VQ TVR +Q R IC +SGL ++M ++YSD+ D E + +LHEGD
Sbjct: 1127 SGETEDTISDGRIVQVTVRSIQDNRIICTFDSGLKAIVMADNYSDEGFDLE-TLQLHEGD 1185
Query: 897 ILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKEL 956
+LT KIK++ KNR+ V+L C+ SE+R R N DPY HE+ + Q+EQ+K RK+KEL
Sbjct: 1186 VLTGKIKNVNKNRFMVYLTCKASELR-RRPLSRGNHDPYNHEQDMTSQNEQDKLRKQKEL 1244
Query: 957 AKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAH 1016
AKKHFK R+IVHP FQN+TA+EAM+ LS KEPGE +IRPSSRGPS+LTLTLK++DGV AH
Sbjct: 1245 AKKHFKPRMIVHPHFQNLTAEEAMQFLSDKEPGEKVIRPSSRGPSFLTLTLKIFDGVLAH 1304
Query: 1017 KDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKG 1076
K+I EGGKDHKDI SL+ +GKTL I +TFEDLDEV+DRY+DPLV HLK+ML YRKF+KG
Sbjct: 1305 KEITEGGKDHKDITSLLRLGKTLTIDNETFEDLDEVIDRYVDPLVGHLKSMLLYRKFKKG 1364
Query: 1077 SKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRK 1136
SK+EVDE+LR EK+E P RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKGF+FRK
Sbjct: 1365 SKSEVDEMLRAEKSENPMRIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKGFRFRK 1424
Query: 1137 RMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRS 1175
R F++IDRLV+YFQ+HID P D+ PS+R+VAAMVPM+S
Sbjct: 1425 RDFDNIDRLVSYFQKHIDKPPPDAGPSMRNVAAMVPMKS 1463
>gi|359494965|ref|XP_002267338.2| PREDICTED: transcription elongation factor SPT6-like [Vitis vinifera]
Length = 1891
Score = 1519 bits (3932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 802/1364 (58%), Positives = 978/1364 (71%), Gaps = 104/1364 (7%)
Query: 14 AGP-PTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDL-SISRDDIMRFLDLLH 71
GP P D SI +E++WI +QL + + EG DL DI RFL L H
Sbjct: 373 TGPAPVDIMSIKEETSWILSQLTTKITWFCKMKVIEGNDEGPDLFKKVEQDIERFLKLHH 432
Query: 72 LQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWL 131
++K DIPFIAMYRKE CLSLLKD EQ+ N++ D+ +RT LK +K+LW I DLD+KWL
Sbjct: 433 VEKHDIPFIAMYRKELCLSLLKDPEQDVAENEDEDETKRTTRLKRNKILWVIKDLDRKWL 492
Query: 132 LLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKF 191
LL+KR++ALQ YY KRYEEE +++DE RL LN++LF SIS SL+ AE+E EVDDV+LKF
Sbjct: 493 LLRKRQNALQLYYNKRYEEELLKMHDEARLNLNKELFKSISNSLKNAESEIEVDDVNLKF 552
Query: 192 NLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE- 250
NLHFP EV V +GQ+KRPKR + Y CS AGLWEVA+KFG +SEQ GLQ++L + E
Sbjct: 553 NLHFPLDEVNVSQGQFKRPKRKSHYKVCSNAGLWEVAAKFGCNSEQFGLQVTLVNVRRED 612
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
LED KE+PEE+AS F +F + QAVL+GARHMAAVEIS EPC RK+VRSIFM+ AVVST
Sbjct: 613 LEDLKESPEEIASTFTGPLFETPQAVLKGARHMAAVEISSEPCFRKHVRSIFMEEAVVST 672
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
PTP G+ ID H+F+G KWL KPL +F+DAQWLLIQ+AEEEKLL+VTIKLPE +LNK
Sbjct: 673 RPTPKGNMIIDPSHEFSGFKWLHGKPLSQFKDAQWLLIQRAEEEKLLEVTIKLPESTLNK 732
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
L S+ + YLSDGVS SA+LWN+QR+LIL+DA NFLLP M K+AR ++ +AK+WLL E
Sbjct: 733 LTSESNDCYLSDGVSISARLWNEQRKLILQDAFSNFLLPYMEKQARVFLTAKAKAWLLEE 792
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFT 490
YGK LWN+ SV PYQ K+ND DEE APRV+ACCW PG P TTFVMLDS GEV+DVL
Sbjct: 793 YGKQLWNRASVAPYQHKENDDELDEETAPRVMACCWDPGNPATTFVMLDSLGEVMDVLHA 852
Query: 491 GCLTLRSQNVRDQQSKKN-DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
L + S+N + QQ +K DQER+ +FM +HQPHVVVLGAVNL+C LK++IYEIIFKM+
Sbjct: 853 SSLIIWSRNNQKQQKQKKIDQERVREFMTEHQPHVVVLGAVNLACRRLKEEIYEIIFKMM 912
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
EE+PRDV +MD + IVYGDESLPR+YE+SRISSDQLPGQ G VKRAVALGR+LQNPLAM
Sbjct: 913 EENPRDVSQKMDGIRIVYGDESLPRIYEHSRISSDQLPGQLGIVKRAVALGRFLQNPLAM 972
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
+ATLCGPG+EILSWKL L LTPDEKY M+EQVMVDVTNQVG+DINLA +W FAPL
Sbjct: 973 IATLCGPGKEILSWKLGSLGYLLTPDEKYEMVEQVMVDVTNQVGIDINLAAAHDWLFAPL 1032
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGK-KVFVNAVGFLRVRRSGQAASS 728
QF+SGLGP KA LQR+L+R GA+ RK + HGLG VF +AVGFLRVR G A++S
Sbjct: 1033 QFVSGLGPSKAGHLQRALIRIGAVTCRKKLIE-HGLGTMSVFRSAVGFLRVRCCGMASAS 1091
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLK-- 786
S +DLLDDTRIHPESY LA+ LAK+VY + E D DD LEMAI +VR+ P L+
Sbjct: 1092 SN-MDLLDDTRIHPESYNLAKILAKDVY-KCFENDEIDDV-VLEMAIGYVRNHPKYLEDL 1148
Query: 787 ---TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT 843
Y D IK K NKRETLY I+ EL+HGF+DWR+ Y+EPS+DEEF MI+GE DT
Sbjct: 1149 KIFEYAKDYEIKHGK--NKRETLYDIKMELLHGFRDWRSPYEEPSEDEEFLMITGENGDT 1206
Query: 844 LAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIK 903
LAEG++VQATVR +Q +R CVL+SGL G+L K+ +SD+ + +L+ KL G+IL CKIK
Sbjct: 1207 LAEGKIVQATVRSIQSERVFCVLDSGLDGILFKDGFSDERDEIDLTTKLQVGEILICKIK 1266
Query: 904 SIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKE 963
I+KNR+ V L C+E + R+++ Q+ +++DPYY E++SS EQEKA +KELAKKH K
Sbjct: 1267 QIEKNRHCVVLTCKEIQSRSSKDQNPRSVDPYYCEDQSSLSQEQEKA--QKELAKKHVKP 1324
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
R+IVHP FQN+T +EAM+ LS K GES PSSRG SYL+LT+K+YDGVYAHK+I EGG
Sbjct: 1325 RMIVHPRFQNITFEEAMEYLSDKAVGESTFHPSSRGSSYLSLTIKIYDGVYAHKEITEGG 1384
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
KD KD SL+ +GKTLKIG + FEDLDEV+DRY+DPLV+HLKAML+YRKFR+G KAEVD+
Sbjct: 1385 KDQKDAMSLLHLGKTLKIGNENFEDLDEVMDRYVDPLVTHLKAMLNYRKFRRGKKAEVDD 1444
Query: 1084 LLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDID 1143
LLR EK+++P RIVY FGI HEHPG FIL+YIR+TNPHHEYIGLYPKGFKFRK +F++ID
Sbjct: 1445 LLRAEKSDYPMRIVYCFGICHEHPGAFILSYIRNTNPHHEYIGLYPKGFKFRKHIFDNID 1504
Query: 1144 RLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGW----- 1198
LVAYFQ+HI+DP + A SI+SVAAMVPMRSPA G T G GW +N GGW
Sbjct: 1505 GLVAYFQKHINDPWPEKALSIQSVAAMVPMRSPAVGAPT---GGGW--ESNTGGWRGQFN 1559
Query: 1199 -NRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDS 1257
+RD++ TP SR G + G G DG
Sbjct: 1560 SSRDKTCTPSSRGGNENRSRGDGGDG---------------------------------- 1585
Query: 1258 SYDTPKWDSANKSGDDSWGNFPGAKAQNPAGREAFPGGWGSS----------GGGGSSGW 1307
W +FPGA+ N GRE P GWGSS GGG + W
Sbjct: 1586 -----------------WSSFPGAEVLNSPGREVPPAGWGSSSGRAGVENLGGGGRTKSW 1628
Query: 1308 GGASDGDNGGWGH----------SSGGADKDSGWGGG-GSKRSS 1340
G + G WGH S GG + S WGG G+ R S
Sbjct: 1629 GSSG---VGSWGHGRSTHHWGGSSRGGTARGSNWGGARGNGRGS 1669
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 61/155 (39%), Gaps = 38/155 (24%)
Query: 1179 GGSTASAGSG-------------WGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHP 1225
GG T S GS WGGS+ GG R + GR G G +GH
Sbjct: 1622 GGRTKSWGSSGVGSWGHGRSTHHWGGSS-RGGTARGSNWGGARGNGRGSGSQGCGSNGHG 1680
Query: 1226 SGLPRPYGGRGRGRGSNNSNR----GNSSNSERQDS-SYDTPKWDSANKSGDDSWGNFPG 1280
G G G G GS N+ G + SER + + WDS D WGN PG
Sbjct: 1681 PGR-----GCGHGHGSYNAKDQKEFGYGAGSERGSVLNVEDKSWDS------DGWGNLPG 1729
Query: 1281 AKAQNPAGREAFPGGWGSSGGGGSSGWGGASDGDN 1315
K QNP R A GWGS WG + DN
Sbjct: 1730 FKVQNPPSRAASSDGWGS--------WGRSKASDN 1756
>gi|242088343|ref|XP_002440004.1| hypothetical protein SORBIDRAFT_09g024270 [Sorghum bicolor]
gi|241945289|gb|EES18434.1| hypothetical protein SORBIDRAFT_09g024270 [Sorghum bicolor]
Length = 1687
Score = 1514 bits (3921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 766/1242 (61%), Positives = 953/1242 (76%), Gaps = 45/1242 (3%)
Query: 5 ECRSLRKALAG-PPTDGESIVDESTWIYNQLL-SGTLPLFGQRGAGSPKEGHDLSISRDD 62
E L + L G PPTD I +ES WI++ L G L FG E + I + D
Sbjct: 314 ERMQLSEELTGYPPTDKTMIEEESLWIHSHLTGDGFLSFFGN-------ERMNKDIDQKD 366
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDL---EQNEVNNDNNDDFERTPTLKWHKV 119
I+ + +LH+ K +IPFIAMYRKE C +LLK L E NE N DN D+ +KWHK+
Sbjct: 367 IVNVVTMLHVNKFEIPFIAMYRKENCPTLLKSLDSDEGNEDNEDNKDNESDARKMKWHKL 426
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LWA+ LD+KWLLLQKRK ALQ YY+KR+++E RRI D TR LN QL++SI ++L+ A+
Sbjct: 427 LWAVQTLDRKWLLLQKRKVALQLYYEKRFDDEKRRIDDVTRQELNSQLYNSIIEALKDAK 486
Query: 180 TEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLG 239
+E+EV+DVD KFNLHFPPGEV +EGQ+KRPKR + YS C KAGLWEVA++FG S+EQLG
Sbjct: 487 SEKEVEDVDAKFNLHFPPGEVE-EEGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLG 545
Query: 240 LQLSLEKMGD--ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKY 297
L+L K+ + ELE + +PEE+A+NF CAMF ++Q VL+GARHMAAVEI CEP VRK+
Sbjct: 546 HHLTLTKIPEAGELESGRHSPEEVAANFTCAMFETAQDVLRGARHMAAVEIGCEPIVRKH 605
Query: 298 VRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLL 357
VR IFM+ AVVST PTP+G++ ID +HQ +GVKWLREKPL KF DAQWLLIQKAEEEKLL
Sbjct: 606 VRGIFMNKAVVSTSPTPEGNTIIDPYHQLSGVKWLREKPLSKFVDAQWLLIQKAEEEKLL 665
Query: 358 QVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARS 417
+VT+KLPED+ KL S+ +E+YLSD VSKSAQLW++QR++IL DA NFLLPSM KEARS
Sbjct: 666 KVTVKLPEDAKKKLMSEARENYLSDCVSKSAQLWDEQRKMILDDAFFNFLLPSMEKEARS 725
Query: 418 LMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP-----DEEAAPRVLACCWGPGKPE 472
L++ +AK WL MEYGK LWN V+V P+++KD D D+E+ RV+ACCWGPGKP
Sbjct: 726 LLTAKAKHWLHMEYGKQLWNNVTVAPWKKKDADKKDADIDLDDESELRVMACCWGPGKPA 785
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
TTFVMLDSSGE+VDVL+ G ++ RSQ V +QQ KKNDQ+R+LKFM DHQPHVV +GA N
Sbjct: 786 TTFVMLDSSGELVDVLYAGSISNRSQGVAEQQRKKNDQQRVLKFMTDHQPHVVCVGASNY 845
Query: 533 SCTSLKDDIYE------------------IIFKMVEEHPRDVGHEMDELSIVYGDESLPR 574
+C LKDDIYE +IF++VE+HPRDV +M+ LS+VYGDES+PR
Sbjct: 846 NCRQLKDDIYELQALSLFLKFHFTKVLKVVIFRIVEDHPRDVNPQMENLSVVYGDESVPR 905
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
LYENSRISSDQLPGQ G VKRAVALGRYLQNPLAM+ATLCGPG+EILSWKL LE FLTP
Sbjct: 906 LYENSRISSDQLPGQPGIVKRAVALGRYLQNPLAMIATLCGPGKEILSWKLHALEQFLTP 965
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
DEKY ++EQVMVD TNQ+G D+NLA EW F+ LQFI+GLGPRKA++LQ+ LVR G+IF
Sbjct: 966 DEKYEVVEQVMVDATNQIGFDVNLAASHEWHFSTLQFIAGLGPRKASALQKDLVREGSIF 1025
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+RK+ V LG+KVF+NA GFLRVRRSG AA+S+Q IDLL+DTRIHPESY LA+ LAK+
Sbjct: 1026 SRKELVKP--LGRKVFMNASGFLRVRRSGAAAASAQLIDLLEDTRIHPESYVLAKNLAKD 1083
Query: 755 VYNRDIEGDLND-DEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKR-ETLYLIRRE 812
VY D + ++N+ D+D EMAIEHVR++PD L++ ++ ++K E ++ ETL IRRE
Sbjct: 1084 VYVEDAQHEINEMDDDEQEMAIEHVREKPDWLRSLKIEEYVKSISEEYRKLETLRDIRRE 1143
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
L+ GF DWR Y EPS D+EF+M+SGETEDT+++GR+VQ TVR +Q + IC +SGL
Sbjct: 1144 LLSGFSDWRTPYTEPSPDDEFWMLSGETEDTISDGRIVQVTVRNIQENKIICTFDSGLKA 1203
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNL 932
++M ++YSD+ D E S +L EGD+LT KI+++ KNR+ V+L C+ SEMR +
Sbjct: 1204 IVMADNYSDEGFDLE-SSQLREGDVLTGKIRNVNKNRFMVYLTCKASEMRRRPFSRGDQ- 1261
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
DPYYHE+ Q+ ++KARK+KELAKKHFK R+IVHP FQN+TA+EAM+ LS KE GE +
Sbjct: 1262 DPYYHEQDMISQTVEDKARKQKELAKKHFKPRMIVHPHFQNLTAEEAMQFLSDKEHGEKV 1321
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSSRGPS+LTLTLK++DGVYAHK+I E GKDHKDI SL+ +GKTL I +TFEDLDEV
Sbjct: 1322 IRPSSRGPSFLTLTLKIFDGVYAHKEITESGKDHKDITSLLRLGKTLTIDNETFEDLDEV 1381
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFIL 1112
+DRY+DPLV HLK+MLSYRKFRKG K EVDE+LR EKAE P RIVY FGISHEHPGTFIL
Sbjct: 1382 IDRYVDPLVGHLKSMLSYRKFRKGLKNEVDEMLRAEKAENPMRIVYSFGISHEHPGTFIL 1441
Query: 1113 TYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP 1172
+YIRSTNPHHEYIGLYPKGF+FRKR F++IDRLV+YFQ++ID P D+ PS+R+VAAMVP
Sbjct: 1442 SYIRSTNPHHEYIGLYPKGFRFRKRDFDNIDRLVSYFQKNIDKPPPDAGPSMRNVAAMVP 1501
Query: 1173 MRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRTGRND 1214
M++ A G G GG +G +RDR + G GR D
Sbjct: 1502 MKNSAWGSGGGGGGDANGGWRGDGSNDRDRPFS-GRSGGRFD 1542
>gi|413945866|gb|AFW78515.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 1621
Score = 1506 bits (3898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 761/1222 (62%), Positives = 950/1222 (77%), Gaps = 32/1222 (2%)
Query: 5 ECRSLRKALAG-PPTDGESIVDESTWIYNQLL-SGTLPLFGQRGAGSPKEGHDLSISRDD 62
E L + L G PPTD +I +ES+WI++ L G L FG E + I + D
Sbjct: 289 ERMQLSEELTGYPPTDKTTIEEESSWIHSHLTGDGFLSFFGN-------EHINKDIDQKD 341
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I+ + +LH K +IPFIAMYRKE C +LL + +E N D D + L+WHK+LWA
Sbjct: 342 IVNVVTMLHANKFEIPFIAMYRKESCPTLLS-FDSDEDNEDIESDARK---LRWHKLLWA 397
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
+ LD+KWLLLQKRK ALQ YY+KR+++E RRI D TR LN QL++SI ++L+ A++E+
Sbjct: 398 VQALDRKWLLLQKRKVALQLYYEKRFDDEKRRIDDVTRQELNSQLYNSIIEALKDAKSEK 457
Query: 183 EVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQL 242
EV+DVD KFNLHFPPGEV +EGQ+KRPKR + YS C KAGLWEVA++FG S+EQLG L
Sbjct: 458 EVEDVDAKFNLHFPPGEVE-EEGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGHHL 516
Query: 243 SLEKMGD--ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+L K+ + ELE + +PEE+A+NF CAMF +SQ VL+GARHMAAVEI CEP VRK+VR
Sbjct: 517 TLTKIPEAGELESGRHSPEEVAANFTCAMFETSQDVLRGARHMAAVEIGCEPIVRKHVRG 576
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVT 360
IFM+ AVVST PT +G++ ID +HQ +GVKWLREKPL KF DAQWLLIQKAEEEKLL+VT
Sbjct: 577 IFMNKAVVSTSPTSEGNTIIDPYHQLSGVKWLREKPLSKFVDAQWLLIQKAEEEKLLKVT 636
Query: 361 IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMS 420
+KLPED+ KL S+ +E+YLSD VSKSAQLW++QR++IL DA NFLLPSM KEARSL+
Sbjct: 637 VKLPEDAKKKLMSEARENYLSDCVSKSAQLWDEQRKMILDDAFFNFLLPSMEKEARSLLM 696
Query: 421 GRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP-----DEEAAPRVLACCWGPGKPETTF 475
+AK WL MEYGK LWNKV+V P+++KD D D+E+ RV+ACCWGPGKP TTF
Sbjct: 697 TKAKHWLHMEYGKQLWNKVTVAPWKKKDADKKDADIDLDDESELRVMACCWGPGKPATTF 756
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCT 535
VMLDSSGE+VDVL+ G ++ RSQ V +QQ KKNDQ+R+LKFM DHQPHVV +GA N +C
Sbjct: 757 VMLDSSGELVDVLYAGSISNRSQGVAEQQRKKNDQQRVLKFMTDHQPHVVCVGASNYNCR 816
Query: 536 SLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKR 595
LKDD+YE+IFK+VE+HPRDV +M+ SIVYGDES+PRLYENSRISSDQLPGQ G VKR
Sbjct: 817 QLKDDLYEVIFKIVEDHPRDVNAQMENFSIVYGDESVPRLYENSRISSDQLPGQSGIVKR 876
Query: 596 AVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLD 655
AVALGRYLQNPLAM+ATLCGPG+EILSWKL LE FLTPDEKY ++EQVMVD TNQ+G D
Sbjct: 877 AVALGRYLQNPLAMIATLCGPGKEILSWKLHALEQFLTPDEKYEIVEQVMVDATNQIGFD 936
Query: 656 INLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVG 715
+NLA EW F+ LQFI+GLGPRKA++LQ+ LVR G+IF+RK+ V LG+KVF+NA G
Sbjct: 937 VNLAASHEWHFSTLQFIAGLGPRKASALQKDLVREGSIFSRKELVKP--LGRKVFMNASG 994
Query: 716 FLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND-DEDALEMA 774
FLRVRRSG AA+S+Q IDLL+DTRIHPESY LA+ LAK+VY D + ++N+ D++ EMA
Sbjct: 995 FLRVRRSGAAAASAQLIDLLEDTRIHPESYVLAKNLAKDVYVEDAQHEINEMDDEEQEMA 1054
Query: 775 IEHVRDRPDLLKTYLLDRHIKEKKRENKR-ETLYLIRRELIHGFQDWRNQYKEPSQDEEF 833
IEHVR+RP +L++ + +IK E ++ ETL I+ EL+ GF DWR Y EPS DEEF
Sbjct: 1055 IEHVRERPSMLRSLKIVEYIKSITEEYRKLETLRDIKFELLCGFSDWRIPYTEPSPDEEF 1114
Query: 834 YMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLH 893
+++SGET+DT++EGR+VQ TVR +Q + IC +SGL ++M ++YSD+ D E S +L
Sbjct: 1115 WLLSGETDDTISEGRIVQVTVRNIQDNKIICTFDSGLKAIVMADNYSDEGFDPE-SSQLR 1173
Query: 894 EGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKE 953
EGD+LT KI+++ KNR+ V+L C+ SEMR + + DPYYHE+ + Q+ ++KARK+
Sbjct: 1174 EGDVLTGKIRNVNKNRFMVYLTCKASEMRRRPFSRGEQ-DPYYHEQDMTSQTVEDKARKQ 1232
Query: 954 KELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGV 1013
KELAKKHFK R+IVHP FQN+TA+EAM+ LS KE GE +IRPSSRGPS+LTLTLK++DGV
Sbjct: 1233 KELAKKHFKPRMIVHPHFQNLTAEEAMQFLSDKEHGEKLIRPSSRGPSFLTLTLKIFDGV 1292
Query: 1014 YAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKF 1073
YAHK+I E GKDHKDI SL+ +GKTL I +TFEDLDEV+DRY+DPLV HLK+MLSYRKF
Sbjct: 1293 YAHKEIAESGKDHKDITSLLRLGKTLTIDNETFEDLDEVIDRYVDPLVGHLKSMLSYRKF 1352
Query: 1074 RKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK 1133
RKG K EVDE+LR EKAE P RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKGF+
Sbjct: 1353 RKGLKNEVDEMLRAEKAENPMRIVYSFGISHEHPGTFILSYIRSTNPHHEYIGLYPKGFR 1412
Query: 1134 FRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPA-NGGSTASAGSGWGGS 1192
FRKR F++IDRLV+YFQ++ID P D+ PS+R+VAAMVPM++ A G A GW G
Sbjct: 1413 FRKRDFDNIDRLVSYFQKNIDKPPPDAGPSMRNVAAMVPMKNSAWGSGGGGDANGGWRG- 1471
Query: 1193 TNEGGWNRDRSSTPGSRTGRND 1214
+G +RDR + G GR D
Sbjct: 1472 --DGSNDRDRPFS-GRSGGRFD 1490
>gi|413945864|gb|AFW78513.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 1622
Score = 1506 bits (3898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 761/1222 (62%), Positives = 950/1222 (77%), Gaps = 32/1222 (2%)
Query: 5 ECRSLRKALAG-PPTDGESIVDESTWIYNQLL-SGTLPLFGQRGAGSPKEGHDLSISRDD 62
E L + L G PPTD +I +ES+WI++ L G L FG E + I + D
Sbjct: 290 ERMQLSEELTGYPPTDKTTIEEESSWIHSHLTGDGFLSFFGN-------EHINKDIDQKD 342
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I+ + +LH K +IPFIAMYRKE C +LL + +E N D D + L+WHK+LWA
Sbjct: 343 IVNVVTMLHANKFEIPFIAMYRKESCPTLLS-FDSDEDNEDIESDARK---LRWHKLLWA 398
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
+ LD+KWLLLQKRK ALQ YY+KR+++E RRI D TR LN QL++SI ++L+ A++E+
Sbjct: 399 VQALDRKWLLLQKRKVALQLYYEKRFDDEKRRIDDVTRQELNSQLYNSIIEALKDAKSEK 458
Query: 183 EVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQL 242
EV+DVD KFNLHFPPGEV +EGQ+KRPKR + YS C KAGLWEVA++FG S+EQLG L
Sbjct: 459 EVEDVDAKFNLHFPPGEVE-EEGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGHHL 517
Query: 243 SLEKMGD--ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+L K+ + ELE + +PEE+A+NF CAMF +SQ VL+GARHMAAVEI CEP VRK+VR
Sbjct: 518 TLTKIPEAGELESGRHSPEEVAANFTCAMFETSQDVLRGARHMAAVEIGCEPIVRKHVRG 577
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVT 360
IFM+ AVVST PT +G++ ID +HQ +GVKWLREKPL KF DAQWLLIQKAEEEKLL+VT
Sbjct: 578 IFMNKAVVSTSPTSEGNTIIDPYHQLSGVKWLREKPLSKFVDAQWLLIQKAEEEKLLKVT 637
Query: 361 IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMS 420
+KLPED+ KL S+ +E+YLSD VSKSAQLW++QR++IL DA NFLLPSM KEARSL+
Sbjct: 638 VKLPEDAKKKLMSEARENYLSDCVSKSAQLWDEQRKMILDDAFFNFLLPSMEKEARSLLM 697
Query: 421 GRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP-----DEEAAPRVLACCWGPGKPETTF 475
+AK WL MEYGK LWNKV+V P+++KD D D+E+ RV+ACCWGPGKP TTF
Sbjct: 698 TKAKHWLHMEYGKQLWNKVTVAPWKKKDADKKDADIDLDDESELRVMACCWGPGKPATTF 757
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCT 535
VMLDSSGE+VDVL+ G ++ RSQ V +QQ KKNDQ+R+LKFM DHQPHVV +GA N +C
Sbjct: 758 VMLDSSGELVDVLYAGSISNRSQGVAEQQRKKNDQQRVLKFMTDHQPHVVCVGASNYNCR 817
Query: 536 SLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKR 595
LKDD+YE+IFK+VE+HPRDV +M+ SIVYGDES+PRLYENSRISSDQLPGQ G VKR
Sbjct: 818 QLKDDLYEVIFKIVEDHPRDVNAQMENFSIVYGDESVPRLYENSRISSDQLPGQSGIVKR 877
Query: 596 AVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLD 655
AVALGRYLQNPLAM+ATLCGPG+EILSWKL LE FLTPDEKY ++EQVMVD TNQ+G D
Sbjct: 878 AVALGRYLQNPLAMIATLCGPGKEILSWKLHALEQFLTPDEKYEIVEQVMVDATNQIGFD 937
Query: 656 INLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVG 715
+NLA EW F+ LQFI+GLGPRKA++LQ+ LVR G+IF+RK+ V LG+KVF+NA G
Sbjct: 938 VNLAASHEWHFSTLQFIAGLGPRKASALQKDLVREGSIFSRKELVKP--LGRKVFMNASG 995
Query: 716 FLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND-DEDALEMA 774
FLRVRRSG AA+S+Q IDLL+DTRIHPESY LA+ LAK+VY D + ++N+ D++ EMA
Sbjct: 996 FLRVRRSGAAAASAQLIDLLEDTRIHPESYVLAKNLAKDVYVEDAQHEINEMDDEEQEMA 1055
Query: 775 IEHVRDRPDLLKTYLLDRHIKEKKRENKR-ETLYLIRRELIHGFQDWRNQYKEPSQDEEF 833
IEHVR+RP +L++ + +IK E ++ ETL I+ EL+ GF DWR Y EPS DEEF
Sbjct: 1056 IEHVRERPSMLRSLKIVEYIKSITEEYRKLETLRDIKFELLCGFSDWRIPYTEPSPDEEF 1115
Query: 834 YMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLH 893
+++SGET+DT++EGR+VQ TVR +Q + IC +SGL ++M ++YSD+ D E S +L
Sbjct: 1116 WLLSGETDDTISEGRIVQVTVRNIQDNKIICTFDSGLKAIVMADNYSDEGFDPE-SSQLR 1174
Query: 894 EGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKE 953
EGD+LT KI+++ KNR+ V+L C+ SEMR + + DPYYHE+ + Q+ ++KARK+
Sbjct: 1175 EGDVLTGKIRNVNKNRFMVYLTCKASEMRRRPFSRGEQ-DPYYHEQDMTSQTVEDKARKQ 1233
Query: 954 KELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGV 1013
KELAKKHFK R+IVHP FQN+TA+EAM+ LS KE GE +IRPSSRGPS+LTLTLK++DGV
Sbjct: 1234 KELAKKHFKPRMIVHPHFQNLTAEEAMQFLSDKEHGEKLIRPSSRGPSFLTLTLKIFDGV 1293
Query: 1014 YAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKF 1073
YAHK+I E GKDHKDI SL+ +GKTL I +TFEDLDEV+DRY+DPLV HLK+MLSYRKF
Sbjct: 1294 YAHKEIAESGKDHKDITSLLRLGKTLTIDNETFEDLDEVIDRYVDPLVGHLKSMLSYRKF 1353
Query: 1074 RKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK 1133
RKG K EVDE+LR EKAE P RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKGF+
Sbjct: 1354 RKGLKNEVDEMLRAEKAENPMRIVYSFGISHEHPGTFILSYIRSTNPHHEYIGLYPKGFR 1413
Query: 1134 FRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPA-NGGSTASAGSGWGGS 1192
FRKR F++IDRLV+YFQ++ID P D+ PS+R+VAAMVPM++ A G A GW G
Sbjct: 1414 FRKRDFDNIDRLVSYFQKNIDKPPPDAGPSMRNVAAMVPMKNSAWGSGGGGDANGGWRG- 1472
Query: 1193 TNEGGWNRDRSSTPGSRTGRND 1214
+G +RDR + G GR D
Sbjct: 1473 --DGSNDRDRPFS-GRSGGRFD 1491
>gi|298205075|emb|CBI40596.3| unnamed protein product [Vitis vinifera]
Length = 1408
Score = 1491 bits (3859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 763/1212 (62%), Positives = 932/1212 (76%), Gaps = 29/1212 (2%)
Query: 14 AGP-PTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDL-SISRDDIMRFLDLLH 71
GP P D SI +E++WI +QL + + EG DL DI RFL L H
Sbjct: 205 TGPAPVDIMSIKEETSWILSQLTTKITWFCKMKVIEGNDEGPDLFKKVEQDIERFLKLHH 264
Query: 72 LQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWL 131
++K DIPFIAMYRKE CLSLLKD EQ+ N++ D+ +RT LK +K+LW I DLD+KWL
Sbjct: 265 VEKHDIPFIAMYRKELCLSLLKDPEQDVAENEDEDETKRTTRLKRNKILWVIKDLDRKWL 324
Query: 132 LLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKF 191
LL+KR++ALQ YY KRYEEE +++DE RL LN++LF SIS SL+ AE+E EVDDV+LKF
Sbjct: 325 LLRKRQNALQLYYNKRYEEELLKMHDEARLNLNKELFKSISNSLKNAESEIEVDDVNLKF 384
Query: 192 NLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE- 250
NLHFP EV V +GQ+KRPKR + Y CS AGLWEVA+KFG +SEQ GLQ++L + E
Sbjct: 385 NLHFPLDEVNVSQGQFKRPKRKSHYKVCSNAGLWEVAAKFGCNSEQFGLQVTLVNVRRED 444
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
LED KE+PEE+AS F +F + QAVL+GARHMAAVEIS EPC RK+VRSIFM+ AVVST
Sbjct: 445 LEDLKESPEEIASTFTGPLFETPQAVLKGARHMAAVEISSEPCFRKHVRSIFMEEAVVST 504
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
PTP G+ ID H+F+G KWL KPL +F+DAQWLLIQ+AEEEKLL+VTIKLPE +LNK
Sbjct: 505 RPTPKGNMIIDPSHEFSGFKWLHGKPLSQFKDAQWLLIQRAEEEKLLEVTIKLPESTLNK 564
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
L S+ + YLSDGVS SA+LWN+QR+LIL+DA NFLLP M K+AR ++ +AK+WLL E
Sbjct: 565 LTSESNDCYLSDGVSISARLWNEQRKLILQDAFSNFLLPYMEKQARVFLTAKAKAWLLEE 624
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFT 490
YGK LWN+ SV PYQ K+ND DEE APRV+ACCW PG P TTFVMLDS GEV+DVL
Sbjct: 625 YGKQLWNRASVAPYQHKENDDELDEETAPRVMACCWDPGNPATTFVMLDSLGEVMDVLHA 684
Query: 491 GCLTLRSQNVRDQQSKKN-DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
L + S+N + QQ +K DQER+ +FM +HQPHVVVLGAVNL+C LK++IYEIIFKM+
Sbjct: 685 SSLIIWSRNNQKQQKQKKIDQERVREFMTEHQPHVVVLGAVNLACRRLKEEIYEIIFKMM 744
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
EE+PRDV +MD + IVYGDESLPR+YE+SRISSDQLPGQ G VKRAVALGR+LQNPLAM
Sbjct: 745 EENPRDVSQKMDGIRIVYGDESLPRIYEHSRISSDQLPGQLGIVKRAVALGRFLQNPLAM 804
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
+ATLCGPG+EILSWKL L LTPDEKY M+EQVMVDVTNQVG+DINLA +W FAPL
Sbjct: 805 IATLCGPGKEILSWKLGSLGYLLTPDEKYEMVEQVMVDVTNQVGIDINLAAAHDWLFAPL 864
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGK-KVFVNAVGFLRVRRSGQAASS 728
QF+SGLGP KA LQR+L+R GA+ RK + HGLG VF +AVGFLRVR G A++S
Sbjct: 865 QFVSGLGPSKAGHLQRALIRIGAVTCRKKLI-EHGLGTMSVFRSAVGFLRVRCCGMASAS 923
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLK-- 786
S +DLLDDTRIHPESY LA+ LAK+VY + E D DD LEMAI +VR+ P L+
Sbjct: 924 SN-MDLLDDTRIHPESYNLAKILAKDVY-KCFENDEIDDV-VLEMAIGYVRNHPKYLEDL 980
Query: 787 ---TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT 843
Y D IK K NKRETLY I+ EL+HGF+DWR+ Y+EPS+DEEF MI+GE DT
Sbjct: 981 KIFEYAKDYEIKHGK--NKRETLYDIKMELLHGFRDWRSPYEEPSEDEEFLMITGENGDT 1038
Query: 844 LAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIK 903
LAEG++VQATVR +Q +R CVL+SGL G+L K+ +SD+ + +L+ KL G+IL CKIK
Sbjct: 1039 LAEGKIVQATVRSIQSERVFCVLDSGLDGILFKDGFSDERDEIDLTTKLQVGEILICKIK 1098
Query: 904 SIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKE 963
I+KNR+ V L C+E + R+++ Q+ +++DPYY E++SS EQEKA +KELAKKH K
Sbjct: 1099 QIEKNRHCVVLTCKEIQSRSSKDQNPRSVDPYYCEDQSSLSQEQEKA--QKELAKKHVKP 1156
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
R+IVHP FQN+T +EAM+ LS K GES PSSRG SYL+LT+K+YDGVYAHK+I EGG
Sbjct: 1157 RMIVHPRFQNITFEEAMEYLSDKAVGESTFHPSSRGSSYLSLTIKIYDGVYAHKEITEGG 1216
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
KD KD SL+ +GKTLKIG + FEDLDEV+DRY+DPLV+HLKAML+YRKFR+G KAEVD+
Sbjct: 1217 KDQKDAMSLLHLGKTLKIGNENFEDLDEVMDRYVDPLVTHLKAMLNYRKFRRGKKAEVDD 1276
Query: 1084 LLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDID 1143
LLR EK+++P RIVY FGI HEHPG FIL+YIR+TNPHHEYIGLYPKGFKFRK +F++ID
Sbjct: 1277 LLRAEKSDYPMRIVYCFGICHEHPGAFILSYIRNTNPHHEYIGLYPKGFKFRKHIFDNID 1336
Query: 1144 RLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGW----- 1198
LVAYFQ+HI+DP + A SI+SVAAMVPMRSPA G T G GW +N GGW
Sbjct: 1337 GLVAYFQKHINDPWPEKALSIQSVAAMVPMRSPAVGAPT---GGGW--ESNTGGWRGQFN 1391
Query: 1199 -NRDRSSTPGSR 1209
+RD++ TP SR
Sbjct: 1392 SSRDKTCTPSSR 1403
>gi|15221717|ref|NP_176510.1| transcription elongation factor SPT6 [Arabidopsis thaliana]
gi|12323256|gb|AAG51608.1|AC010795_12 chromatin structure regulator, putative; 94915-98581 [Arabidopsis
thaliana]
gi|332195949|gb|AEE34070.1| transcription elongation factor SPT6 [Arabidopsis thaliana]
Length = 1197
Score = 1482 bits (3836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 743/1151 (64%), Positives = 911/1151 (79%), Gaps = 39/1151 (3%)
Query: 9 LRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLD 68
+A+ D SI +ES WIY +LL ++G I++DDI++FL+
Sbjct: 81 FEEAIGIVSLDDMSIQEESNWIYARLLQ--------------EQGQGCLINKDDIVKFLE 126
Query: 69 LLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDK 128
+ H+QKL+IPFIAMYRKE+C SLL + + +D N D + KWHKVLW I DLD+
Sbjct: 127 MFHVQKLEIPFIAMYRKEQCRSLLDSSDDDHDGSDFNLD--KKLETKWHKVLWMIQDLDR 184
Query: 129 KWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD 188
KW+LL+KRK+AL YY KR+EEE+ LN+ LF+S+ KSL+AAETEREVDDVD
Sbjct: 185 KWVLLRKRKTALFGYYTKRFEEET------CMSDLNKSLFESVIKSLQAAETEREVDDVD 238
Query: 189 LKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG 248
KFNLHFP E+ DEGQYKRP R ++YS CSK G+ E A+KFGYS+EQLGL LSLEK+
Sbjct: 239 SKFNLHFPHCEI--DEGQYKRPNRKSQYSICSKFGIKEFANKFGYSAEQLGLALSLEKVF 296
Query: 249 -DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
DELED K+TPEEMA N++CAMF SQAVL+GARHMAAVEISCEP +RKYVR IFM+NAV
Sbjct: 297 VDELEDAKKTPEEMALNYECAMFGDSQAVLKGARHMAAVEISCEPSIRKYVRGIFMENAV 356
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS 367
VST PTPDG+ IDSFH+F+ VKWL EKPLRKF+ QWLLIQKAEEEKLLQVT KLPE+
Sbjct: 357 VSTSPTPDGNVVIDSFHRFSAVKWLSEKPLRKFDGVQWLLIQKAEEEKLLQVTFKLPENQ 416
Query: 368 LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWL 427
+N++ S+C EHYLS GVSK AQLWN+QR+LIL+DA+ F+LPSM KEARSL++ RAK+ L
Sbjct: 417 MNRIISECSEHYLSVGVSKYAQLWNEQRKLILEDAVHGFVLPSMEKEARSLLTSRAKTQL 476
Query: 428 LMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDV 487
L EYG+ LWNKVS GPY+R +N T +EEAAPRVLACCWGPG PETTFVMLDSSGE+VDV
Sbjct: 477 LSEYGQVLWNKVSSGPYRRNNN--TSEEEAAPRVLACCWGPGNPETTFVMLDSSGELVDV 534
Query: 488 LFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFK 547
L++G + LRS++V DQ+ KK DQ+R LKF+ DHQP V+ L AVNLSC LKD+IYE IF+
Sbjct: 535 LYSGSIGLRSRDVNDQKRKKMDQDRFLKFIRDHQPDVLALAAVNLSCVRLKDEIYEAIFQ 594
Query: 548 MVEEHPRD-VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
MVEE P + V + + +VY DESLPRLYENSRISS+QLP Q G VKRAV+LGRYLQNP
Sbjct: 595 MVEELPLNYVDDRIYDFPLVYADESLPRLYENSRISSEQLPQQAGIVKRAVSLGRYLQNP 654
Query: 607 LAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
LAM++TLCGPGR+ILSWKL ++FL PDEKY M+EQVMVD+TNQVG+DINLA EW F
Sbjct: 655 LAMISTLCGPGRDILSWKLHSFQDFLDPDEKYEMVEQVMVDITNQVGIDINLAASHEWLF 714
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
+PLQF+SGLGPRKAASLQ+SLVRAG+IF RK+ + HG+GKKVFVNA GFLR+RRSG A
Sbjct: 715 SPLQFVSGLGPRKAASLQKSLVRAGSIFVRKELIN-HGIGKKVFVNAAGFLRIRRSGLAC 773
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD-IEGDLNDDEDALEMAIEHVRDRPDLL 785
SSSQFIDLLDDTRIHPESYGLAQELAK+VY D + G D++DA+EMAIEHVRD P L
Sbjct: 774 SSSQFIDLLDDTRIHPESYGLAQELAKDVYAHDTVRG---DEDDAIEMAIEHVRDEPASL 830
Query: 786 KTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
+ +LD +++ K +ENK+ET LI REL GFQDWR+ +KE DEEFYMISGET++T+
Sbjct: 831 RKIVLDEYLRSKNQENKKETYSLIMRELSCGFQDWRSLFKEVDSDEEFYMISGETKETIG 890
Query: 846 EGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCKIKS 904
EGR+VQATV++V +A CVL+ GL G+L+KEDYSDD RD +LS+KL EGDI+TCK+KS
Sbjct: 891 EGRIVQATVKKVTSGKAKCVLDCGLPGILLKEDYSDDGRDIVDLSNKLCEGDIVTCKVKS 950
Query: 905 IQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKER 964
I K RY V LVC+ESEMR +R + ++D YYHEE +++ +++ KK FK R
Sbjct: 951 ILKQRYHVLLVCKESEMRKHR--NLGDVDDYYHEE---KRNSVLIEKEKVPKEKKQFKSR 1005
Query: 965 LIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGK 1024
+IVHP FQN+TA++A LS K GESI+RPSSRG ++LTL +K+ D VYA+K+IIEG K
Sbjct: 1006 MIVHPRFQNITAEQATVYLSDKNIGESIVRPSSRGLNHLTLMIKISDNVYANKEIIEGEK 1065
Query: 1025 DHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDEL 1084
++KDI SL IGKTLKIG +TFEDLDEV+DRY+DPLV+HL ML++RKFR G+K+E+D+L
Sbjct: 1066 ENKDIVSLQRIGKTLKIGNETFEDLDEVMDRYVDPLVTHLMTMLNHRKFRTGTKSEIDDL 1125
Query: 1085 LRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDR 1144
LR+EK P +VY FG+SHEHPG+FIL+YIRS NPHHEYIGLYPKGFKFRKRMF D+D+
Sbjct: 1126 LRVEKGVNPKMVVYSFGVSHEHPGSFILSYIRSANPHHEYIGLYPKGFKFRKRMFGDLDK 1185
Query: 1145 LVAYFQRHIDD 1155
L AYF+RHID+
Sbjct: 1186 LAAYFKRHIDN 1196
>gi|297840173|ref|XP_002887968.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333809|gb|EFH64227.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1239
Score = 1473 bits (3813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 736/1154 (63%), Positives = 896/1154 (77%), Gaps = 63/1154 (5%)
Query: 17 PTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLD 76
P D SI +ES WIY +L+ P F +++DDI+RFL++ H+QKL+
Sbjct: 130 PVDDISIEEESNWIYARLVQEHGPSF--------------LVNKDDIVRFLEMSHVQKLE 175
Query: 77 IPFIAMYRKEEC-------------LSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAI 123
IPFIAMYRKE+C +LLK LE KW+KV W I
Sbjct: 176 IPFIAMYRKEQCRSLLDSSDDDGSDFNLLKKLET-----------------KWNKVFWMI 218
Query: 124 HDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETERE 183
DLD+KWLLL+KRK+AL Y+ KR+EEE+ R LN+ LF+S+ KSL+AAETERE
Sbjct: 219 QDLDRKWLLLRKRKTALFGYFTKRFEEET------CRSDLNKSLFESVMKSLKAAETERE 272
Query: 184 VDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS 243
VDDVD KFNLHFP E+ DEGQYKRP R + YS CSK G+ E A+KFGYS+EQLG LS
Sbjct: 273 VDDVDSKFNLHFPHCEI--DEGQYKRPNRKSHYSICSKFGIREFANKFGYSAEQLGFALS 330
Query: 244 LEKMG-DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF 302
LEK+ DELED K+TPEEMA +KCAMF Q VL+GARH+AAVEISCEP ++KYVR I+
Sbjct: 331 LEKVFVDELEDAKKTPEEMALYYKCAMFEDPQVVLKGARHVAAVEISCEPLIKKYVRGIY 390
Query: 303 MDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK 362
M+NAVVST PTPDGD IDSFH+F+ VKWLREKPLRKFE QWLLIQKAEEEKLLQVT K
Sbjct: 391 MENAVVSTSPTPDGDVVIDSFHRFSAVKWLREKPLRKFEGTQWLLIQKAEEEKLLQVTFK 450
Query: 363 LPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
LPE+ +N++ S+C EHYLS GVSK AQLWN+QR+LIL+DA+ FLLPSM KEARSL++ R
Sbjct: 451 LPENQMNRIISECSEHYLSVGVSKYAQLWNEQRKLILEDAVHGFLLPSMEKEARSLLTSR 510
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSG 482
AK+ LL EYG+ LW KVS GPY+R +N+ T DEEAAPRVLACCWGPG PETTFVMLDSSG
Sbjct: 511 AKTRLLSEYGQVLWKKVSSGPYRRNNNN-TSDEEAAPRVLACCWGPGNPETTFVMLDSSG 569
Query: 483 EVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIY 542
E+VDVL+ + LR ++V DQ+ KK DQ+RL KF+ DHQP++V L A NLSC LKD+IY
Sbjct: 570 ELVDVLYAESIALRFRDVNDQKRKKKDQDRLRKFIRDHQPNLVALAAANLSCVRLKDEIY 629
Query: 543 EIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRY 602
E+IF+MVEE P V + +L +VY DESLPRLYENSRIS +QLP Q G VKRAVALGRY
Sbjct: 630 EVIFQMVEELPSVVEAGIYDLPVVYADESLPRLYENSRISREQLPQQAGIVKRAVALGRY 689
Query: 603 LQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHR 662
LQNPLAM++TLCGPG++ILSWKL L++FL PDEKY M+EQVMVD+TNQVG+DINLA
Sbjct: 690 LQNPLAMISTLCGPGKDILSWKLHSLQDFLDPDEKYEMVEQVMVDLTNQVGIDINLAASH 749
Query: 663 EWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRS 722
EW FAPLQF+SGLGPRKAASLQRSLVR+G+IF RK+ + HG+GKK+FVNA GFLR+RRS
Sbjct: 750 EWLFAPLQFVSGLGPRKAASLQRSLVRSGSIFVRKELIN-HGIGKKLFVNAAGFLRIRRS 808
Query: 723 GQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP 782
G A SSSQFIDLLDDTRIHPESYGLAQELAK+VY D D D++DA+EMAIE+VRD P
Sbjct: 809 GLACSSSQFIDLLDDTRIHPESYGLAQELAKDVYTHDTVRD--DEDDAIEMAIEYVRDEP 866
Query: 783 DLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETED 842
L+ +LD +++ K +ENK+ET I REL GFQDWR+ +KE DEEFYMISGET++
Sbjct: 867 ASLRKIVLDEYLRSKNQENKKETYSFIMRELSCGFQDWRSLFKEVDPDEEFYMISGETKE 926
Query: 843 TLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD-SELSDKLHEGDILTCK 901
T+ EGR+VQATV++V +A CVL+ GL G+L+KEDYSDD RD +LS+KL EG I+TCK
Sbjct: 927 TIGEGRIVQATVKKVSSGKAKCVLDCGLPGILLKEDYSDDGRDIVDLSNKLCEGYIVTCK 986
Query: 902 IKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHF 961
+KSI K RY V LVC+ESEMR NR + +++D YYHEE + +++ KK F
Sbjct: 987 VKSILKQRYHVLLVCKESEMRKNR--NLRDVDDYYHEE---ERKNVLIEKEKAPKEKKQF 1041
Query: 962 KERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIE 1021
K R+IVHP FQN+TA++A + LS K GESI+RPSSRG ++LTL +K++D VYA+K+IIE
Sbjct: 1042 KSRMIVHPRFQNITAEQATEYLSYKNIGESIVRPSSRGLNHLTLMIKIFDNVYANKEIIE 1101
Query: 1022 GGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEV 1081
G K++KDI SL IGKTLKIG +TFEDLDEV+DRY+DPLV+HL ML+YRKFR G+K+E+
Sbjct: 1102 GEKENKDIVSLQRIGKTLKIGIETFEDLDEVMDRYVDPLVTHLMTMLNYRKFRTGTKSEI 1161
Query: 1082 DELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFED 1141
D+LLR+EK P +VY FG+SHEHPG+FIL+YIRS NPHHEYIGLYPKGFKFRKRMF D
Sbjct: 1162 DDLLRVEKGVNPKMVVYSFGVSHEHPGSFILSYIRSANPHHEYIGLYPKGFKFRKRMFGD 1221
Query: 1142 IDRLVAYFQRHIDD 1155
+D+L AYF+RH+DD
Sbjct: 1222 LDKLAAYFKRHVDD 1235
>gi|357128867|ref|XP_003566091.1| PREDICTED: transcription elongation factor SPT6-like [Brachypodium
distachyon]
Length = 1585
Score = 1459 bits (3776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 740/1218 (60%), Positives = 933/1218 (76%), Gaps = 47/1218 (3%)
Query: 9 LRKALAGPPTDGESI-VDESTWIYNQLL-SGTLPLFGQRGAGSPKEGHDLSISRDDIMRF 66
L + L G D E+ +ES WI+NQL G L FG E + I + DI
Sbjct: 298 LSEELTGNIRDDETKREEESVWIHNQLTGDGFLSFFGN-------EPVNREIQQKDI--- 347
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
IPFIAMYRKE CLSLL+D + +E N+ E ++WHK+LWA+ L
Sbjct: 348 ----------IPFIAMYRKENCLSLLEDYDADEHENE-----EVPRKMRWHKLLWAVQTL 392
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D+KWLLLQKRK ALQ YY KR+++E RRI D TR +LN+QL+ SI ++L+ A++E+EV+D
Sbjct: 393 DRKWLLLQKRKLALQIYYDKRFDDEKRRIDDVTRQSLNRQLYHSIIEALKEAKSEKEVED 452
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK 246
VD KFNLHFPPGEV +EGQ+KRPKR + YS C KAGLWEVA++FG S+EQLG L+L K
Sbjct: 453 VDAKFNLHFPPGEVE-EEGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGHHLTLTK 511
Query: 247 MGD--ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMD 304
+ + EL+ K++PE++A+NF CAMF + Q VL+GARHMAAVEI CEP VRK++RSIFM+
Sbjct: 512 IPEAGELDSGKDSPEDVAANFTCAMFETPQDVLRGARHMAAVEIGCEPIVRKHIRSIFMN 571
Query: 305 NAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP 364
AVVST PTP+G+ ID++HQ +G KWL EKPL KF DAQWLLIQKAEEEKLL+VTI+LP
Sbjct: 572 KAVVSTSPTPEGNLIIDAYHQLSGFKWLEEKPLNKFVDAQWLLIQKAEEEKLLKVTIELP 631
Query: 365 EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
E + +L ++ +E+YLSD VSKSAQLW++QR++IL DA FLLPSMVKE+RSL++ +AK
Sbjct: 632 EGAKKELIAEARENYLSDCVSKSAQLWDEQRKMILDDAFLTFLLPSMVKESRSLLTAKAK 691
Query: 425 SWLLMEYGKALWNKVSVGPYQRKDNDITP-----DEEAAPRVLACCWGPGKPETTFVMLD 479
S+L MEYGK LW+KVSV P+++KD D D+E+ RV+ACCWGPGKP TTFVMLD
Sbjct: 692 SYLHMEYGKQLWDKVSVAPWKKKDADKKDADIDMDDESELRVMACCWGPGKPATTFVMLD 751
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
SSGE+VDVL+ G +++RSQ V +QQ KKNDQ+R+LKFM DH PHVV +GA NL+C LKD
Sbjct: 752 SSGELVDVLYAGSISIRSQGVSEQQRKKNDQQRVLKFMTDHSPHVVCVGASNLNCRQLKD 811
Query: 540 DIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVAL 599
DIYE+IFK+VE+HPRDV +M+ SIVYGDES+PRLYENSRISSDQLPGQ VKRAVAL
Sbjct: 812 DIYEVIFKIVEDHPRDVNPQMENFSIVYGDESVPRLYENSRISSDQLPGQSAIVKRAVAL 871
Query: 600 GRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLA 659
GRYLQNPLAMVATLCGPG+EILSWKL PLE+FLTPDEKY ++EQVMVD TNQ+G D+NLA
Sbjct: 872 GRYLQNPLAMVATLCGPGKEILSWKLHPLEHFLTPDEKYEIVEQVMVDATNQIGFDVNLA 931
Query: 660 IHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRV 719
EW F+ LQF++GLGPRKA++LQ+ LVR G+IF+RK+ V LG+KVF+NA GFLRV
Sbjct: 932 ASHEWHFSTLQFVAGLGPRKASALQKELVREGSIFSRKELVKP--LGRKVFMNASGFLRV 989
Query: 720 RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND-DEDALEMAIEHV 778
RRSG AA+S+Q IDLL+DTRIHPESY LA+ LAK+V + D ++N+ D+D EMAIEHV
Sbjct: 990 RRSGAAAASAQIIDLLEDTRIHPESYALAKNLAKDVRSED-SNEVNEMDDDEQEMAIEHV 1048
Query: 779 RDRPDLLKTYLLDRHIKEKKRE-NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMIS 837
R+RP LL+ + +++ E KR+TL I+ EL+ GF DWR Y EPS DEEF+++S
Sbjct: 1049 RERPTLLRNLKIPEYMESISEEFRKRQTLVDIKMELLSGFSDWRTPYAEPSPDEEFWLLS 1108
Query: 838 GETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDI 897
GETED +++GR VQ TVR +Q R IC +SGL ++M ++YSDD S +LHEGD+
Sbjct: 1109 GETEDNISDGRTVQVTVRNIQENRIICTFDSGLKAIVMGDNYSDDVAFDAESLQLHEGDV 1168
Query: 898 LTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELA 957
LT KIK++ KNR+ V+L C+ES+M+ + N DP+ H E+ ++ +KARKEKELA
Sbjct: 1169 LTGKIKNVNKNRFIVYLTCKESDMKRRPFTR-NNHDPFNH-EKHIVPNKDDKARKEKELA 1226
Query: 958 KKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHK 1017
KK FK R+IVHP FQN+TA+EAM+ L KEPGE +IRPS +GPS+LTLTLK++DGV+AHK
Sbjct: 1227 KKLFKPRMIVHPHFQNLTAEEAMQFLGDKEPGEKVIRPSLKGPSFLTLTLKIFDGVFAHK 1286
Query: 1018 DIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGS 1077
+I E GKDHKDI SL+ +GKTL IG ++FEDLDEV+DRY+DPLV +LK+MLSYRKFRKG
Sbjct: 1287 EITESGKDHKDITSLLRLGKTLTIGNESFEDLDEVIDRYVDPLVGNLKSMLSYRKFRKGL 1346
Query: 1078 KAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKR 1137
K EVD+ LR EKAE P RIVY FGISHEHPGTF+L+YIRSTNPHHEY+GL+PKGF+FRKR
Sbjct: 1347 KGEVDDALRAEKAENPMRIVYCFGISHEHPGTFVLSYIRSTNPHHEYVGLFPKGFRFRKR 1406
Query: 1138 MFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPA-NGGSTASAGSGWGGSTNEG 1196
F+ IDRLV+YFQ+HID P D+ P +R+VAAMVPM++ + G A GW G +G
Sbjct: 1407 DFDSIDRLVSYFQKHIDKPPPDAGPPMRNVAAMVPMKNSSWASGGAGGANDGWRG---DG 1463
Query: 1197 GWNRDRSSTPGSRTGRND 1214
+RDR + G GR D
Sbjct: 1464 DNDRDRPFS-GRTGGRFD 1480
>gi|357119199|ref|XP_003561333.1| PREDICTED: transcription elongation factor SPT6-like [Brachypodium
distachyon]
Length = 1389
Score = 1379 bits (3570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/1121 (60%), Positives = 865/1121 (77%), Gaps = 30/1121 (2%)
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
D +++ IPFIA YRKE C SLLKD + NE N++ T ++WHK+LWA+ LD
Sbjct: 288 DNTRIEEESIPFIATYRKESCPSLLKDHDANEHENEDG-----TKIIRWHKLLWAVQTLD 342
Query: 128 KKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDV 187
+ WLLLQKRK+AL++YY+KR+++E +RI D N+QL SI + L+ A++E+EV+DV
Sbjct: 343 RNWLLLQKRKNALKAYYEKRFDDEKQRIDDGLS---NRQLCYSIIELLKDAKSEKEVEDV 399
Query: 188 DLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
D KFNLHFPPGEV +KRPKR T YS C KAGLWEVA++FG S+EQLG L+L ++
Sbjct: 400 DAKFNLHFPPGEVR----DFKRPKRKTLYSICRKAGLWEVANQFGRSAEQLGHHLTLTRI 455
Query: 248 G--DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
EL+ K +PEE+A+NF A+F + Q VL+GARHMAAVEISCEP VRK++RSIFM+
Sbjct: 456 PVPGELDGMKGSPEEVAANFTSAIFETPQDVLRGARHMAAVEISCEPVVRKHIRSIFMNK 515
Query: 306 AVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE 365
AVVST PTP+G+ DSFHQ + VKWLR KPL KF DAQWLLIQKAEEEKLL+VT++LPE
Sbjct: 516 AVVSTSPTPEGNLIKDSFHQLSSVKWLRNKPLNKFVDAQWLLIQKAEEEKLLKVTVRLPE 575
Query: 366 DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKS 425
D +L S+ +E+YLSD VSKSAQ+W++QR++IL +A + LLPSM KEAR +++ AK+
Sbjct: 576 DVEEELMSEARENYLSDCVSKSAQMWDEQRKMILDNAFFSLLLPSMEKEARFMLTANAKN 635
Query: 426 WLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVV 485
WL MEYGK WNK+SV P+++KD D D+E+ RV+ACCWGPGKP TTFVMLDSSGE+V
Sbjct: 636 WLRMEYGKQFWNKISVAPWKKKDADTHLDQESELRVMACCWGPGKPATTFVMLDSSGELV 695
Query: 486 DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
DVL+ G ++ RSQ +QQ KK+DQ+R+LKFM DHQPH+V LGA NL+C LKDDIYE+I
Sbjct: 696 DVLYAGYVSSRSQGAAEQQRKKDDQQRVLKFMTDHQPHLVCLGASNLNCKQLKDDIYEVI 755
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
F+++E+HPRDV +MD SI Y DE +PRLYENS +SSDQLPGQ G VKRAVALGRYLQN
Sbjct: 756 FRIIEDHPRDVNQQMDNFSIFYCDEFVPRLYENSWVSSDQLPGQSGIVKRAVALGRYLQN 815
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PLAMVATLCGPG+EILSWKL PLE FLTPD+KY +IEQ M+D T+Q+G D+NLA EW
Sbjct: 816 PLAMVATLCGPGKEILSWKLHPLERFLTPDDKYEIIEQAMMDATSQIGFDVNLAASHEWH 875
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
F+ LQF+ GLGPRKA++LQR LVR G+I +RK+ V LG+KVF+NA GFLRVRRSG
Sbjct: 876 FSTLQFVPGLGPRKASALQRELVRQGSILSRKELVNP--LGRKVFMNASGFLRVRRSGAI 933
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEG------DLNDDEDALEMAIEHVR 779
A+++ IDLL+DTRIHPESY LA+ LAK+VY D D++D EMAIEHVR
Sbjct: 934 AATTDVIDLLEDTRIHPESYALAKNLAKDVYAEDAPSREANDGMDMDNDDQQEMAIEHVR 993
Query: 780 DRPDLLKTYLLDRHIKEKKRE-NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISG 838
+RP +LK +D ++ E NKRETL I+REL+ GF DWR Y EP DEEF+M+ G
Sbjct: 994 ERPQMLKALDIDEWMRSIPEEFNKRETLLDIKRELLCGFSDWRTPYAEPIPDEEFWMLCG 1053
Query: 839 ETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDIL 898
ETED++++ R+VQ TVR +Q R IC +SGL ++ +++Y D S +L EGD+L
Sbjct: 1054 ETEDSISDQRIVQVTVRNIQENRIICTFDSGLKAIVTEDNYPDGAE----SLQLKEGDVL 1109
Query: 899 TCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEE--RSSRQSEQEKARKEKEL 956
T KIK++ KNR+ V+L C+ S+MR + N DPYYHE+ + ++E++KA K+K++
Sbjct: 1110 TGKIKNVNKNRFLVYLTCKASDMRTKPFSPS-NQDPYYHEQPDMMTSKNEKDKADKQKQI 1168
Query: 957 AKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAH 1016
KK+FK R+IVHP FQN+TA+EAM+LLS KEPG+ +IRPSSRGPS+LTLTLK DGVYAH
Sbjct: 1169 VKKYFKPRMIVHPNFQNLTAEEAMQLLSEKEPGDKVIRPSSRGPSFLTLTLKFSDGVYAH 1228
Query: 1017 KDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKG 1076
K+IIE GKD KD+ SL+ +GKTL I +TFEDLDEV+DRY+DPLV +LK+MLS+RKFRKG
Sbjct: 1229 KEIIESGKDQKDMTSLLRLGKTLTIDGETFEDLDEVIDRYVDPLVYYLKSMLSHRKFRKG 1288
Query: 1077 SKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRK 1136
K+EVD++ R EKAE P RIVY FG+SHEHPGTFIL+YIRSTNPHHEY+ L P+GF+FRK
Sbjct: 1289 LKSEVDDMARAEKAENPRRIVYCFGMSHEHPGTFILSYIRSTNPHHEYLRLNPRGFRFRK 1348
Query: 1137 RMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPA 1177
R F+ IDRLV+YFQ+HID P D+ PS R+VAAMVPM++ A
Sbjct: 1349 RDFDSIDRLVSYFQKHIDRPPPDAGPSGRNVAAMVPMKNSA 1389
>gi|224057210|ref|XP_002299174.1| global transcription factor group [Populus trichocarpa]
gi|222846432|gb|EEE83979.1| global transcription factor group [Populus trichocarpa]
Length = 1209
Score = 1273 bits (3294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/1139 (56%), Positives = 837/1139 (73%), Gaps = 26/1139 (2%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDL----SISRDDIMRFLDLLHLQKLDIPFI 80
+ES+WI NQL++ PL ++ A +EG+ + I+++DI+RFL++ L+K DIPFI
Sbjct: 89 EESSWILNQLITDMYPLLCKKKA---QEGNGVGLLKKINKEDIVRFLEMHDLEKYDIPFI 145
Query: 81 AMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSAL 140
AMYRKE+CLS+L+DL ++ + N+ ++D E P LKWHK+LWAI++LD+KWLLLQKRK L
Sbjct: 146 AMYRKEKCLSMLEDLGEDGIQNECSNDTEGKPRLKWHKILWAINELDRKWLLLQKRKIML 205
Query: 141 QSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEV 200
+ YKKRYEEE I D RL+L FD+I KSL AETE+++DDV +KF+LHFPP E
Sbjct: 206 EESYKKRYEEECNNIDDMARLSLINLHFDTIMKSLMLAETEKDIDDVSMKFSLHFPPTE- 264
Query: 201 GVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG-DELEDPKETPE 259
V EG++KR +R + YS KAGLWE+A KF YSS+Q L KMG D ED E+PE
Sbjct: 265 EVMEGKFKRRERRSAYSDYIKAGLWELAVKFVYSSKQFCQHLRQAKMGMDFWEDLNESPE 324
Query: 260 EMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSA 319
+AS F CA + +AVL+GARH+AA+EISCEP VRK+ R F D A+VST PTP G
Sbjct: 325 VIASKFTCASLETPEAVLKGARHIAALEISCEPSVRKHARGFFTDEALVSTRPTPKGAKE 384
Query: 320 IDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHY 379
ID HQF+ VKWLR+KPL KF+DAQWL IQKAEEEKLL+VTI+LPEDSLNKL S + Y
Sbjct: 385 IDFCHQFSSVKWLRDKPLGKFQDAQWLRIQKAEEEKLLEVTIRLPEDSLNKLISYSHKIY 444
Query: 380 LSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKV 439
L G QLW++QR+LIL+D N LLPS+ KE R L++ RAK +LMEYG+ LWN+
Sbjct: 445 LVGGDDGYTQLWDEQRKLILQDVFSNCLLPSLEKETRVLLTTRAKCLVLMEYGEQLWNRA 504
Query: 440 SVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQN 499
SV PY K N +E PRV+ACCWGPGKP TTFVMLDS G+++DVL +G ++LRSQN
Sbjct: 505 SVAPYPHKRNVAGLEEGTGPRVMACCWGPGKPPTTFVMLDSCGQLLDVLQSGSISLRSQN 564
Query: 500 VRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHE 559
V Q KK DQ R+ KF++ HQP V+VLGA N SC LKDDI EI+ K +EE D
Sbjct: 565 VTGLQRKKYDQLRVHKFIISHQPDVIVLGAANASCPRLKDDIKEIVLK-IEESSIDADQV 623
Query: 560 MDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGRE 619
++ + ++YGDE+LP+LYE S +S LPGQ+G VKRAVALGRYLQNPLAM+ATLCG +E
Sbjct: 624 LNGIGVIYGDETLPQLYEKSEVSLRHLPGQEGIVKRAVALGRYLQNPLAMIATLCGVQKE 683
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRK 679
I+SWKL L++FLTP+EKYGMIE +MVD+TNQVG+DIN A+ ++W APLQF+SGLG +K
Sbjct: 684 IVSWKLTSLDHFLTPEEKYGMIEMLMVDITNQVGVDINAAVSQDWLSAPLQFVSGLGSQK 743
Query: 680 AASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
AA LQR L + RK+ KK+F NAVGFLRV G+ S D+LD TR
Sbjct: 744 AAFLQRELAAGKIVNNRKELAICGLTEKKIFFNAVGFLRV-CCGEILSFGCEYDMLDGTR 802
Query: 740 IHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKE 796
IHPESYGLA++L K+VY D+ A ++HVR+ P LLK + ++ + +
Sbjct: 803 IHPESYGLAEKLVKDVY----------DDVAEAHPLKHVRNNPQLLKDFDINAYADNFEI 852
Query: 797 KKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRR 856
++ ENK+ TLY I+ EL+HGF D R Y+EP+QDEEF +ISG+ ED AEGR+VQA V R
Sbjct: 853 EQGENKKLTLYDIKTELLHGFLDPRRPYEEPTQDEEFCLISGKDEDAFAEGRIVQAIVCR 912
Query: 857 VQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVC 916
V QRA C L+SGL GM+ K+DYSD+ D L+ +L EGDILTCKIK I K+R+QV L C
Sbjct: 913 VLSQRAFCALDSGLIGMITKDDYSDEAADYSLTKRLREGDILTCKIKQIDKSRHQVLLTC 972
Query: 917 RESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTA 976
+ESE++++R Q+ L+PYY +SS S QE A KE +L KHF R+I+HP ++N+T
Sbjct: 973 KESELKSSRDQNLHELEPYYCGGQSSLVSHQEIACKE-DLKNKHFISRMIIHPHYENMTQ 1031
Query: 977 DEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIG 1036
++A++ L+ K+ GE + RPSSRG YL LT+KV++G+Y HKDIIE GK+ KD S++ +G
Sbjct: 1032 NQAVEFLADKDVGERVFRPSSRGLHYLILTVKVFNGLYVHKDIIEDGKNLKDFSSMLDLG 1091
Query: 1037 KTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRI 1096
KTLKIG+D ++DLDEV+ +Y+DPLV+HLKA+LS+RKF+KGSKAEVDELL+ EK+++P RI
Sbjct: 1092 KTLKIGDDIYKDLDEVISQYVDPLVTHLKAILSFRKFKKGSKAEVDELLKSEKSDYPMRI 1151
Query: 1097 VYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1155
Y FG+S+EHPGTFIL YIR TN HHEYIGL+PKGFKFRK+ F +++LVAYFQ+HIDD
Sbjct: 1152 PYCFGVSYEHPGTFILFYIR-TNLHHEYIGLHPKGFKFRKQTFRKVEQLVAYFQKHIDD 1209
>gi|356515325|ref|XP_003526351.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
Length = 1622
Score = 1243 bits (3217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/1388 (49%), Positives = 907/1388 (65%), Gaps = 98/1388 (7%)
Query: 13 LAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHL 72
+ G D SI +ES+WI QL S PLF + A S + + + R+DI+ FL+L H
Sbjct: 245 IVGSAIDRMSIEEESSWILCQLASNINPLFNE--AKSCRLVN--TAKREDIISFLELHHT 300
Query: 73 QKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
K DIPFIAMYRKE+CLSLL+D + E+ N ND ER P LKWH++LW I +LDKKWL
Sbjct: 301 MKYDIPFIAMYRKEQCLSLLEDPKAEELENIFND-IERKPMLKWHQMLWIIQELDKKWLF 359
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
LQKRKS L YY K +EEE + + ++Q+FDSI+ L+ AETE E+DD+D KFN
Sbjct: 360 LQKRKSLLMEYYNKHFEEEREMSFLVDESSFHKQIFDSITNMLKKAETESEIDDIDRKFN 419
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
LHFPP EV +D G +KRP + Y++C+KAGLW +A+KFG E+ G ++LEK + E
Sbjct: 420 LHFPPAEVFLDSG-FKRPLTKSYYTNCNKAGLWSLANKFG-DPEKFGSLVTLEKGTNSEE 477
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
DP+E+PEE+AS +KC F +++AVL+GARHMAAV +S E RKYVR+IFMD A+VST P
Sbjct: 478 DPQESPEEIASMYKCQTFQTTEAVLKGARHMAAVMLSSEIPFRKYVRTIFMDKALVSTSP 537
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
T G++ IDSFH+FAGVKWLR+KPL KFED+QWL IQKAEEEKLLQV I+LP+ ++N+L
Sbjct: 538 TIKGNTTIDSFHEFAGVKWLRDKPLSKFEDSQWLFIQKAEEEKLLQVKIELPDHTINELT 597
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
CK+ YL DG S ++WN+QR+LI++DA+ NFLLP+M K+AR+L++ +AK+WLLM+Y
Sbjct: 598 MTCKDSYLKDGEGISTRIWNEQRKLIMQDAISNFLLPAMEKDARALLNAKAKNWLLMKYA 657
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGC 492
K +WN+VSV PY + ++D V+ACC G GKP T+FVMLDS G++VDV+
Sbjct: 658 KEVWNRVSVAPYLKNESDTAQKN----GVMACCGGNGKPGTSFVMLDSGGKLVDVMHARS 713
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
LTLRS N+ DQQSKKNDQ+ +LKF+ +QP V+VLGA N C L+++I EII M E +
Sbjct: 714 LTLRSLNIIDQQSKKNDQQCVLKFLTTYQPRVIVLGADNAFCLRLREEINEIISMMSEHN 773
Query: 553 PRDVGHEMDEL-SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
++ +M+ + +V GDE LPRLYE+S+IS +QLP Q G VKRAVALGRYL NPLAMVA
Sbjct: 774 VQNFSQQMEGVPPVVLGDEGLPRLYEDSKISENQLPRQHGIVKRAVALGRYLLNPLAMVA 833
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
TLCG EI+SWKL LE FLT DEK +IE VM DVTNQVG+DINLAI +W APLQF
Sbjct: 834 TLCGVKNEIVSWKLNTLEKFLTSDEKLEIIEWVMTDVTNQVGIDINLAIRHDWLLAPLQF 893
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGK-KVFVNAVGFLRVRRSGQAASSSQ 730
+SGLGP+KA L R L+ + R+D + GL K KVF NAVGFL+V +
Sbjct: 894 VSGLGPKKAGVLHRELLGGTDVRNRRD-LAKFGLDKEKVFCNAVGFLKV-----SCDEEN 947
Query: 731 FID----LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALE--MAIEHVRDRPDL 784
F+D LD TRIHPESY L++ELA VY + + D E AIE++++ P+L
Sbjct: 948 FVDNGSNTLDHTRIHPESYNLSEELALAVYKKHVP----DPEANFSGVNAIEYIQNDPNL 1003
Query: 785 LKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE 841
L+ + L+ + ++ +K E KR TL I+ EL+HGF+D R Y E +Q+EEFYMI+GET
Sbjct: 1004 LENFDLNEYADRLEIEKGEYKRITLIDIKMELLHGFKDPRIPYTELTQEEEFYMITGETG 1063
Query: 842 DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCK 901
D L EG+ VQATVR V ++A CVL+SG+ G+L KED+SD+ + L+DKLH+G +LTCK
Sbjct: 1064 DALVEGKRVQATVRNVMSKQAFCVLDSGMTGVLFKEDFSDETENISLTDKLHQGAVLTCK 1123
Query: 902 IKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHF 961
IK I KN+ V L C+ SE++N+ Q ++DPYYHE S+ E+A K EL K+F
Sbjct: 1124 IKLIDKNKCWVNLTCKLSELKNDGEQGFHDMDPYYHEGNIISISQVERADK-MELGTKNF 1182
Query: 962 KERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIE 1021
K R+I HP FQN+TAD+A + L+ +E GE I PSSRG S+L L++K+++GVY HKDI+E
Sbjct: 1183 KPRMISHPNFQNITADQAKQFLADQEVGEYIFHPSSRGLSFLILSIKIFNGVYVHKDIVE 1242
Query: 1022 GGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEV 1081
GGK ++L +G+TLKIGE+TF+D+++V++ Y++PLV HLK M+++RKF+KG+KAEV
Sbjct: 1243 GGKS----QNLPELGETLKIGEETFKDINQVIEHYVNPLVVHLKDMINFRKFKKGTKAEV 1298
Query: 1082 DELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFED 1141
DELL++EK E+P RI YGFGIS+EHPGTFIL+YIRS NPHHE++ + KGFKFRK++F++
Sbjct: 1299 DELLKLEKDEYPNRIAYGFGISYEHPGTFILSYIRSRNPHHEFVAIQRKGFKFRKQIFKN 1358
Query: 1142 IDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGG-----------STASAGSGWG 1190
I++LVAYFQ HI+D + AP+ +S A+ R +GG S A SG G
Sbjct: 1359 IEQLVAYFQNHIND---NVAPA-KSCIAVGSFRESLSGGWRSNNVDQHTESIAYNDSGNG 1414
Query: 1191 GSTNEGGWNRDRSSTP------------------GSRTGRNDYRNGGGRDG--HPSG--- 1227
+ G R G R+G DY NG DG PS
Sbjct: 1415 SNAGRGRGRGGRGQGRDRGGCGRGRDSGGCGRGFGHRSGSRDYFNGDDNDGSSFPSSNWG 1474
Query: 1228 -----LPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYDTPKWDSANKSGDDSWGNFPGAK 1282
P G G+ S GN R + + G WG +
Sbjct: 1475 SGSRDSPDDSFGAGKSWEVRGSGEGNGGRQGRGRGRGRGSRGSQGDGQGRVPWGGNSHER 1534
Query: 1283 AQNPAGREAFPGGWGSSGGGGSSG-------WGGASDGD----------NGGWGH-SSGG 1324
G G G G GS G WGG + + NG WG ++G
Sbjct: 1535 GGYSDGNSDSGWGQGQDQGRGSDGNGQGRGRWGGNNSNEERNKDEESRGNGSWGFGNAGS 1594
Query: 1325 ADKDSGWG 1332
+++SGWG
Sbjct: 1595 GNENSGWG 1602
>gi|358346811|ref|XP_003637458.1| Transcription elongation factor SPT6 [Medicago truncatula]
gi|355503393|gb|AES84596.1| Transcription elongation factor SPT6 [Medicago truncatula]
Length = 2159
Score = 1196 bits (3094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1152 (53%), Positives = 814/1152 (70%), Gaps = 31/1152 (2%)
Query: 17 PTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLD 76
P D SI +ES+WI QL+S PLF + + G +++R+DI+RFL+L H++K D
Sbjct: 218 PVDRMSIEEESSWILRQLVSNINPLFSE----AKSCGLVDTVNREDIVRFLELHHIKKYD 273
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIAMYRKE+C SLLKD +Q+++ N + +D E P L WHK+LW I +LD KWL LQKR
Sbjct: 274 IPFIAMYRKEQCHSLLKDGKQDDLENTSMNDGEGNPKLNWHKILWIIKELDIKWLHLQKR 333
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+ LQ YY K +E+E + + + ++Q+FDSI+ LE AETERE+DDVD+KFNL+FP
Sbjct: 334 KNMLQRYYNKHFEDECQMSFLAEESSFHKQIFDSITIMLEKAETEREIDDVDMKFNLYFP 393
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSL-EKMGDELEDPK 255
P + + G YKRP T YS C KAGL +A K G + E+ G ++L E EDP+
Sbjct: 394 PADEFLSSG-YKRPLMKTYYSDCRKAGLSSLARKIG-NPEKFGSLVTLNEAEMVSEEDPE 451
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
E+PEEMAS + C F + +AVL+GARHMA++ +SCE RKYVRSIFMD A+VST PT
Sbjct: 452 ESPEEMASIYTCETFQTLEAVLKGARHMASLMLSCEIPFRKYVRSIFMDKALVSTRPTLK 511
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
G++AIDSFH+FAG KWL++KPL KFED+QWLLIQKAEEE+LL+V IKLPED++ +L + C
Sbjct: 512 GNTAIDSFHEFAGFKWLKDKPLLKFEDSQWLLIQKAEEEELLKVEIKLPEDAVKELMTVC 571
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ YL D S QLWN+QR+LIL+D + N LLPSM KEAR+L++ +AK+W LM+YG
Sbjct: 572 NDAYLKDSEGTSTQLWNEQRKLILQDTISNLLLPSMEKEARALLNAKAKNWSLMKYGMQF 631
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTL 495
WN+VSVGPYQ DN + V+ACCWG GKP TTFVMLDS GE+VDV+ G LTL
Sbjct: 632 WNRVSVGPYQNNDNAAAKER----GVVACCWGNGKPGTTFVMLDSKGELVDVMHAGSLTL 687
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
RSQN+ DQQ +K DQ +LKF+ H+P V+VLGA N SC LK+DI EII M E++ +D
Sbjct: 688 RSQNINDQQRRKRDQNCVLKFLSIHRPKVIVLGAANSSCIRLKEDINEIISVMAEDNFQD 747
Query: 556 VGHEMDEL-SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
G EM+ L ++V GDE LP LYE S IS+ Q P Q G VKRAVALGRYL NPLAMVATLC
Sbjct: 748 AGQEMNGLPTVVLGDEGLPHLYEESEISTSQFPRQYGIVKRAVALGRYLLNPLAMVATLC 807
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G +E LSWKL PLE FL+ DEK MIE +M+D+TNQVG+DINL +W APLQFISG
Sbjct: 808 GGNKEALSWKLDPLERFLSSDEKMEMIEWIMIDITNQVGIDINLGSRHDWLLAPLQFISG 867
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID- 733
LGP KA L R L+ + RKD K+VF NAVGFL+V + F+D
Sbjct: 868 LGPTKAGMLLRELLGGTDVRNRKDLAKFGLKTKRVFCNAVGFLQV-----SCDDPNFVDT 922
Query: 734 ---LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
+LD TRIHPESY LA+ELA+ V R D D AIE +++ P LL+++ +
Sbjct: 923 AGNVLDRTRIHPESYSLAEELARAVVTRHYA----DANDTQLNAIECIQNDPKLLESFDI 978
Query: 791 DRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
+ + ++ + E K+ TL+ IR EL+HGF+D R+ ++EP+QD+EFYM++GE L EG
Sbjct: 979 NEYADGLETETGECKKATLFDIRMELLHGFKDPRSPFQEPTQDDEFYMVTGEMGVALVEG 1038
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
VQATVRRV ++A C LESG++G+L KED+SDD D L++KL EG +L CK+K I K
Sbjct: 1039 ERVQATVRRVLARQAFCELESGISGVLFKEDFSDDIGDMPLTEKLREGVVLKCKVKLIDK 1098
Query: 908 NRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIV 967
+R QV L + S++++ Q +++DPYY + S QE K K+LA+K F R I
Sbjct: 1099 SRCQVNLTSKVSDLKSVGDQSFRDMDPYYCQGSIILPSLQESTDK-KDLAEKSFLPRKIS 1157
Query: 968 HPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHK 1027
HP FQN+TAD+A + L+ K GE I PSSRG YLTL+LK +D +Y HKD++EGGK H
Sbjct: 1158 HPHFQNITADQAKEFLADKAVGEYIFHPSSRGLCYLTLSLKFFDAIYVHKDVVEGGKSH- 1216
Query: 1028 DIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRI 1087
D+ LV +G TLK+GE+ F++LD+V++ Y+DPLV HLK ++++RKF+KG+KAEVDELL+
Sbjct: 1217 DMNRLVELGSTLKVGEEIFDNLDKVIELYLDPLVVHLKDLINFRKFKKGTKAEVDELLKH 1276
Query: 1088 EKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVA 1147
EK E P RI YG GIS+EHPG FIL+YIRST PHHE+I ++PKGFKFRK +F +I++++
Sbjct: 1277 EKEEHPNRIPYGIGISYEHPGLFILSYIRSTKPHHEFIAIHPKGFKFRKHVFNNIEQVMG 1336
Query: 1148 YFQRHIDD-PQG 1158
YFQ HI+D PQ
Sbjct: 1337 YFQNHINDVPQA 1348
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 1175 SPANG--GSTASAGSGWGGS-------TNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHP 1225
+P+ G G A+ G WGG+ T++GGW +S + + G++ P
Sbjct: 1693 TPSGGESGWGATGGKSWGGNSSNQESNTSKGGWGVTAASNGAPENEKAGWGASHGKNETP 1752
Query: 1226 SGLPRPYGGR-GRGRGSNNSNRGNSSNSERQDSSYDTPKWDSANKSGDDS------WGNF 1278
SG P GG G G S GNSSN E S+ W + S S WG
Sbjct: 1753 SG---PSGGESGWGATGGKSWGGNSSNKE---SNTTEAGWGATTASNGGSGNENSGWGAA 1806
Query: 1279 PGAKAQNPAGREAFPGGWGSSGGGGSSGWGGASDGDNGGWG---HSSGGA-DKDSGWGGG 1334
PG K P+G E+ GG G GG+S S+ + GGWG S+GGA +++SGWG
Sbjct: 1807 PG-KNVTPSGGESGWGGTGGKSWGGNST-NQESNTEKGGWGVTAASNGGAGNENSGWGSA 1864
Query: 1335 GSKRSSDGG 1343
+K ++ G
Sbjct: 1865 NAKNATASG 1873
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 29/118 (24%)
Query: 1251 NSERQDSSYDTPKW--DSANKSG----DDSWGNFPGAKAQNPAGREAFPGGWGSSGG--- 1301
N+ ++S+ W +A+ SG + WG PG K P+G E+ GWG++GG
Sbjct: 1654 NNTNEESNTGKSGWGVTAADNSGSGNENSGWGAAPG-KNVTPSGGES---GWGATGGKSW 1709
Query: 1302 GGSS----------GWG------GASDGDNGGWGHSSGGADKDSGWGGGGSKRSSDGG 1343
GG+S GWG GA + + GWG S G + SG GG S + GG
Sbjct: 1710 GGNSSNQESNTSKGGWGVTAASNGAPENEKAGWGASHGKNETPSGPSGGESGWGATGG 1767
Score = 40.8 bits (94), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 35/161 (21%)
Query: 1192 STNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSN 1251
+T + GW + GS + + G++ PSG G G G S GNSSN
Sbjct: 1661 NTGKSGWGVTAADNSGSGNENSGWGAAPGKNVTPSG-----GESGWGATGGKSWGGNSSN 1715
Query: 1252 SERQDSSYDTPKWDSANKSGDDSWGNFPGAKAQNPAGREAFPGGWGSSGG---------G 1302
Q+S+ W G A + E GWG+S G G
Sbjct: 1716 ---QESNTSKGGW---------------GVTAASNGAPENEKAGWGASHGKNETPSGPSG 1757
Query: 1303 GSSGWGGASDGDNGGWGHSSGGADKDSGWGGGGSKRSSDGG 1343
G SGWG A+ G + WG +S + ++ G G+ +S+GG
Sbjct: 1758 GESGWG-ATGGKS--WGGNSSNKESNTTEAGWGATTASNGG 1795
>gi|168007757|ref|XP_001756574.1| transcription elongation factor SPT6 [Physcomitrella patens subsp.
patens]
gi|162692170|gb|EDQ78528.1| transcription elongation factor SPT6 [Physcomitrella patens subsp.
patens]
Length = 1235
Score = 1170 bits (3027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/1174 (51%), Positives = 816/1174 (69%), Gaps = 49/1174 (4%)
Query: 9 LRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR--- 65
L +A+ PT +I + WIY++ FG E LS RD I R
Sbjct: 84 LEEAVGALPTSDSAIRQAAEWIYDRA-------FGHLAVPVRPEFRHLSRDRDLISRQIA 136
Query: 66 -FLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L L+H K +IPFIAMYR+EEC LLK+ +D+ +D ER P ++ + LWA+
Sbjct: 137 NVLHLIHDDKFEIPFIAMYRREECFDLLKE------ASDDYEDEER-PLVRTYAALWAVQ 189
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREV 184
DKKWLLLQ+RK+ALQ+ Y+KR + R D+ +L D I ++L A+ ++ V
Sbjct: 190 QWDKKWLLLQRRKTALQAAYEKRIPSDIR---DDPE---KDELVDKILRALADAQADQAV 243
Query: 185 DDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSL 244
DD D KFNLHFPP EV + +G +KRPKR + YS C K GL VA +FG + + G L
Sbjct: 244 DDCDAKFNLHFPPDEVEIVDGGFKRPKRRSLYSICRKGGLGVVAKEFGLAPDLFGENLQA 303
Query: 245 EKMGDELEDPKETPEEMASNFKCAM------FNSSQAVLQGARHMAAVEISCEPCVRKYV 298
++ED +PEE+A+ F C+ F ++VL+GARHM AVEIS EP VR+YV
Sbjct: 304 TYKRHDVEDKPISPEELAARF-CSTNRPANEFWDVRSVLRGARHMVAVEISTEPAVREYV 362
Query: 299 RSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQ 358
R I+ + AVVST PTPDG+ AIDSFHQ+AGVKWL KP+ F+DAQWLLI+KA EEKLL
Sbjct: 363 RGIYAERAVVSTRPTPDGNDAIDSFHQYAGVKWLLNKPIGAFDDAQWLLIEKAAEEKLLT 422
Query: 359 VTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSL 418
VT+ LP++ + L DC+ YLSDGVS +AQ WN+ R+ IL DA+ LLP+M KEAR +
Sbjct: 423 VTVSLPKEPIATLMQDCETLYLSDGVSLTAQQWNEHRKQILHDAVVTLLLPAMEKEARMV 482
Query: 419 MSGRAKSWLLMEYGKALWNKVSVGPY---QRKDNDITPDEEAAPRVLACCWGPGKPETTF 475
++ RAK WL + G LW+KVS+ PY + D D D+ A RVL+CCWGPG P TTF
Sbjct: 483 LTTRAKQWLSAQCGLQLWSKVSIAPYVPPKAGDQDERIDDGPALRVLSCCWGPGNPATTF 542
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCT 535
VMLD++GEV++VL TG L +R+ + ++ K+NDQ+RLL+FM ++QPHVVVLGA NL C
Sbjct: 543 VMLDAAGEVMNVLHTGYLNMRATSAEQKKRKENDQDRLLQFMREYQPHVVVLGAANLQCR 602
Query: 536 SLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKR 595
L DI+E+IFK+VEEHPRD+ +D + +V+GDE++P LYENSR+S +QLPGQ G V+R
Sbjct: 603 HLSQDIFEVIFKVVEEHPRDLAEGLDMIKVVFGDETIPSLYENSRVSQEQLPGQPGIVRR 662
Query: 596 AVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ---- 651
AVALGR+LQNP+ MVA+LCGP +EILS +L P++N LT +E Y +E+VMV V NQ
Sbjct: 663 AVALGRFLQNPVTMVASLCGPTKEILSLRLHPMQNSLTNEELYEAVERVMVTVVNQAWLL 722
Query: 652 ----VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTA-HGLG 706
VG+DINLA +W F PLQF++GLGPRKA ++QR++ AG + TRKD ++ +
Sbjct: 723 SLFIVGIDINLAASHDWIFGPLQFVAGLGPRKAGAIQRAIQSAGRVGTRKDLYSSIRVMD 782
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD-IEGDLN 765
+KVF+N+ GF+RVR SGQAAS Q +D LDDTRIHPESY +A+ +A+ + + I+ D
Sbjct: 783 RKVFINSAGFIRVRGSGQAASGMQHLDPLDDTRIHPESYQIAKNMAEAAFKEEAIQNDEE 842
Query: 766 DDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKK---RENKRETLYLIRRELIHGFQDWRN 822
DED LEMA+EHV P +L T ++ + + + + K TL LI+ EL HGF+DWR
Sbjct: 843 VDEDMLEMAVEHVMTNPVVLDTMDVEEYARSTQGRGQGRKIPTLRLIKSELQHGFRDWRK 902
Query: 823 QYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDD 882
Y EPS++E+FYM+SGETE+TL+ GR+V ATVR VQ R +CVLESGL + KED SDD
Sbjct: 903 PYAEPSEEEKFYMLSGETEETLSCGRIVNATVRNVQQNRVMCVLESGLLAFIQKEDLSDD 962
Query: 883 WRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSS 942
RD E SDK+ EG I+TC++K ++ ++ V L C+ S++R ++ DPYY + +
Sbjct: 963 -RDVEPSDKVSEGSIVTCRVKEVKLAKFLVDLTCKGSDLRAEHWRPRVQPDPYYQPDTTF 1021
Query: 943 RQSEQEKARKEKELAKKH-FKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPS 1001
Q EQ+K RK+KE KK FK R+IVHP FQNV+ D+AMK L+ K+ G+ IIRPSSRGP+
Sbjct: 1022 LQREQDKVRKKKEEEKKKAFKPRMIVHPYFQNVSIDDAMKALAEKDIGDFIIRPSSRGPT 1081
Query: 1002 YLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLV 1061
+L++TLK++DGV+ H DI EGGK+ +D+ S + +GKTL IGE+++EDLDEV+ RY++PLV
Sbjct: 1082 HLSMTLKIHDGVFTHIDIAEGGKESRDLTSFLSLGKTLTIGEESYEDLDEVIARYVEPLV 1141
Query: 1062 SHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPH 1121
+L+ ML YRK+++G+K E+D+LLR E+A P RI Y F ++HEHPG F+L+YIR+ NPH
Sbjct: 1142 GYLREMLRYRKYKQGTKNEIDDLLRAERAANPKRIPYYFSVAHEHPGAFMLSYIRAVNPH 1201
Query: 1122 HEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1155
HEYI L KGF++RK FE+ID+LVAYFQ+H +D
Sbjct: 1202 HEYISLSAKGFRYRKHNFENIDKLVAYFQKHFND 1235
>gi|302756921|ref|XP_002961884.1| hypothetical protein SELMODRAFT_164675 [Selaginella moellendorffii]
gi|300170543|gb|EFJ37144.1| hypothetical protein SELMODRAFT_164675 [Selaginella moellendorffii]
Length = 1366
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/1176 (51%), Positives = 809/1176 (68%), Gaps = 41/1176 (3%)
Query: 17 PTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR----FLDLLHL 72
P I E+ W+Y + G L QR P+ H ++ + ++++ + LLH
Sbjct: 110 PLPQAEIAREAEWVYERAF-GKFALPDQR----PELQHVVNTDKVEVIKQIANVIQLLH- 163
Query: 73 QKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
++++PFI MYRKE C L+ + EQ ++ D + E PTL+ +KVLW + DKKWLL
Sbjct: 164 -EVEVPFIGMYRKEMCKDLIYE-EQESIDADGD---EARPTLRHYKVLWIVQYWDKKWLL 218
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
LQ+RKSAL+ Y KR ++ N + I +SL A +E+ VDD+D KFN
Sbjct: 219 LQRRKSALKDAYVKRAGDQ------------NAEFLSRILESLMDAPSEQCVDDIDAKFN 266
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
L+ PP EV V+EG+++RPKR + YS C K GL V FG S + G L E +
Sbjct: 267 LYCPPDEVEVEEGKFRRPKRRSFYSVCRKHGLGSVTQFFGLSPDLFGDNLLNMYKKHEFD 326
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
D TP+E+A+ F+ Q+VL+GARHMAAVEIS EP R+Y+R+ +MD AVV+T P
Sbjct: 327 DATSTPDEIAATRLAGEFSDIQSVLRGARHMAAVEISAEPAAREYIRNFYMDRAVVTTKP 386
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
T +G+ ID FHQ+A VKWL KP++ FED QWLLIQKAEEEKLL+V+I +P+D+ LF
Sbjct: 387 TVEGNRVIDPFHQYADVKWLLNKPVKAFEDGQWLLIQKAEEEKLLEVSIGIPKDATATLF 446
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + YLSDGVS +AQLWN+QR+ IL+DA+ FLLPSM +E R +++GRAK W+
Sbjct: 447 QEFEPLYLSDGVSITAQLWNEQRKQILRDAVSTFLLPSMERETRVVLTGRAKQWVATNCA 506
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGC 492
LW +SV PY R DEE A RVLACCWGPGKP T FVMLDS+GE++D L G
Sbjct: 507 DQLWKWISVAPYPRPGEQDDRDEEGA-RVLACCWGPGKPATAFVMLDSAGEIIDTLHAGY 565
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYE-IIFKMVEE 551
LT+R+ + QQ KKNDQ+RLL+FM +HQPHVVVLGA N+SC LKDDI+E +IFK+VEE
Sbjct: 566 LTVRTGSYEQQQRKKNDQQRLLQFMTEHQPHVVVLGAANMSCRFLKDDIFEQVIFKIVEE 625
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
HPRD+ +D + +VYGDE++PRLYE SR+S +QL Q G V+RAVALGRYLQNPLA+V+
Sbjct: 626 HPRDLADGIDMIPLVYGDETIPRLYEYSRVSEEQLQQQPGIVRRAVALGRYLQNPLAVVS 685
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+LCGP REILS KL PL+NFLTPDE Y +E+VMV VTNQVG+D+N+A +W FAPLQF
Sbjct: 686 SLCGPSREILSLKLHPLQNFLTPDELYEAVERVMVTVTNQVGVDVNMAASHDWLFAPLQF 745
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKK-VFVNAVGFLRVRRSGQAASSSQ 730
++GLGPRKAA ++R++ AG + +RK+ +T+ L K+ VF+NA GF+R+R SGQ S +
Sbjct: 746 VAGLGPRKAAYIKRAIQGAGRVSSRKEMLTSLELMKRNVFINAAGFIRIRGSGQVPSGT- 804
Query: 731 FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
+D L+DTRIHPESY LA+++A++ Y E DE+ALE+A+EHVRD P +L+ ++
Sbjct: 805 -LDPLEDTRIHPESYDLAKKMAEDAYCE--EHGETADEEALELAVEHVRDHPRVLRNLVI 861
Query: 791 DRHIKEKKRE----NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
+ + K + K ETL I+REL HG+QDWR +Y P DE FYM+S E+E+TL E
Sbjct: 862 EEYAKVVQERGVSGKKLETLMDIKRELQHGYQDWRVKYMSPEPDEVFYMLSQESEETLCE 921
Query: 847 GRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQ 906
GR++QATVR+VQ + + VLESGL G + +ED SDD RD + +DK+ EG ILTC+IK +
Sbjct: 922 GRIIQATVRKVQQNKVMVVLESGLIGFIRREDLSDD-RDVDPADKVAEGSILTCRIKEVH 980
Query: 907 KNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAK-KHFKERL 965
K ++ + L + S++R + + + D YY + Q E+EKARK+ E K K FK R+
Sbjct: 981 KAKFLLDLTSKGSDLRGDHWIPGRPRDRYYQVNPTFFQDEEEKARKKVEEQKHKTFKARM 1040
Query: 966 IVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKD 1025
IVHP F+N++ EA + L+ KE G+ IIRPSS+GPS+L++TLK Y V+ H +I+EGGKD
Sbjct: 1041 IVHPQFRNISLLEATQSLADKEIGDGIIRPSSKGPSHLSMTLKFYPNVFTHIEIVEGGKD 1100
Query: 1026 HKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELL 1085
+ SL+ +GKTLKIGEDTFEDLDEV+ RY+DPLV H + M YRKF++G+K EVD +L
Sbjct: 1101 VSSMTSLLRLGKTLKIGEDTFEDLDEVIARYVDPLVGHWREMFRYRKFKQGTKEEVDNIL 1160
Query: 1086 RIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRL 1145
R EK P RI Y F + +EHPG F L+Y++S N HHEY+ + PKGF+FR R + D+L
Sbjct: 1161 RAEKEANPARIPYYFSVCYEHPGVFTLSYLKSINVHHEYVSVSPKGFRFRHRYLDTPDKL 1220
Query: 1146 VAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGS 1181
VAYFQ+HI+DP ++ R+ AAMVP P GS
Sbjct: 1221 VAYFQKHINDPVPEAP-PRRAAAAMVPSGDPRKAGS 1255
>gi|302817147|ref|XP_002990250.1| hypothetical protein SELMODRAFT_447972 [Selaginella moellendorffii]
gi|300141959|gb|EFJ08665.1| hypothetical protein SELMODRAFT_447972 [Selaginella moellendorffii]
Length = 1470
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/1176 (48%), Positives = 768/1176 (65%), Gaps = 127/1176 (10%)
Query: 17 PTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR----FLDLLHL 72
P I E+ W+Y + G L QR P+ H ++ + ++++ + LLH
Sbjct: 300 PLPQAEIAREAEWVYERAF-GKFALPDQR----PELQHVVNTDKVEVIKQIANVIQLLH- 353
Query: 73 QKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
++++PFI MYRKE C L+ + EQ ++ D + E PTL+ +KVLW + DKKWLL
Sbjct: 354 -EVEVPFIGMYRKEMCKDLIYE-EQESIDADGD---EARPTLRHYKVLWIVQYWDKKWLL 408
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
LQ+RKSAL+ Y KR ++ N + I +SL A +E+ VDD+D KFN
Sbjct: 409 LQRRKSALKDAYVKRAGDQ------------NAEFLSRILESLMDAPSEQCVDDIDAKFN 456
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
L+ PP EV EK E +
Sbjct: 457 LYCPPDEV--------------------------------------------EKH--EFD 470
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
D TP+E+A+ F+ Q+VL+GARHMAAVEIS EP R+Y+R+ +MD AVV+T P
Sbjct: 471 DATSTPDEIAATRLAGEFSDIQSVLRGARHMAAVEISAEPAAREYIRNFYMDRAVVTTKP 530
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
T +G+ ID FHQ+A VKWL KP++ FED QWLLIQKAEEEKLL+V+I +P+D+ LF
Sbjct: 531 TVEGNRVIDPFHQYADVKWLLNKPVKAFEDGQWLLIQKAEEEKLLEVSIGIPKDATATLF 590
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + YLSDGVS +AQLWN+QR+ IL+DA+ FLLPSM +E R +++GRAK W+
Sbjct: 591 QEFEPLYLSDGVSITAQLWNEQRKQILRDAVSTFLLPSMERETRVVLTGRAKQWVATNCA 650
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGC 492
LW +SV PY R DEE A RVLACCWGPGKP T FVMLDS+GE++D L G
Sbjct: 651 DQLWKWISVAPYPRPGEQDDRDEEGA-RVLACCWGPGKPATAFVMLDSAGEIIDTLHAGY 709
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYE-IIFKMVEE 551
LT+R+ + QQ KKNDQ+RLL+FM +HQPHVVVLGA N+SC LKDDI+E +IFK+VEE
Sbjct: 710 LTVRTGSYEQQQRKKNDQQRLLQFMTEHQPHVVVLGAANMSCRFLKDDIFEQVIFKIVEE 769
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
HPRD+ +D + +VYGDE++PRLYE SR+S +QL Q G V+RAVALGRYLQNPLA+V+
Sbjct: 770 HPRDLADGIDMIPLVYGDETIPRLYEYSRVSEEQLQQQPGIVRRAVALGRYLQNPLAVVS 829
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+LCGP REILS KL PL+NFLTPDE Y +E+VMV VTNQVG+D+N+A +W FAPLQF
Sbjct: 830 SLCGPSREILSLKLHPLQNFLTPDELYEAVERVMVTVTNQVGVDVNMAASHDWLFAPLQF 889
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKK-VFVNAVGFLRVRRSGQAASSSQ 730
++GLGPRKAA ++R++ AG + +RK+ +T+ L K+ VF+NA GF+R+R SGQ S +
Sbjct: 890 VAGLGPRKAAYIKRAIQGAGRVSSRKEMLTSLELMKRNVFINAAGFIRIRGSGQVPSGT- 948
Query: 731 FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
+D L+DTRIHPESY LA+++A++ Y E DE+ALE+A+EHVRD P +L+ ++
Sbjct: 949 -LDPLEDTRIHPESYDLAKKMAEDAYCE--EHGETADEEALELAVEHVRDHPRVLRNLVI 1005
Query: 791 DRHIKEKKRE----NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
+ + K + K ETL I+REL HG+QDWR +Y P DE FYM+S E+E+TL E
Sbjct: 1006 EEYAKVVQERGVSGKKLETLMDIKRELQHGYQDWRVKYMSPEPDEVFYMLSQESEETLCE 1065
Query: 847 GRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQ 906
GR++QATVR+VQ + + VLESGL G + +ED SDD RD + +DK+ EG ILTC+IK
Sbjct: 1066 GRIIQATVRKVQQNKVMVVLESGLIGFIRREDLSDD-RDVDPADKVAEGSILTCRIK--- 1121
Query: 907 KNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAK-KHFKERL 965
+ E+EKARK+ E K K FK R+
Sbjct: 1122 -------------------------------------EDEEEKARKKVEEQKHKTFKARM 1144
Query: 966 IVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKD 1025
IVHP F+N++ EA + L+ KE G+ IIRPSS+GPS+L++TLK Y V+ H +I+EGGKD
Sbjct: 1145 IVHPQFRNISLLEATQSLADKEIGDGIIRPSSKGPSHLSMTLKFYPNVFTHIEIVEGGKD 1204
Query: 1026 HKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELL 1085
+ SL+ +GKTLKIGEDTFEDLDEV+ RY+DPLV H + M YRKF++G+K EVD +L
Sbjct: 1205 VSSMTSLLRLGKTLKIGEDTFEDLDEVIARYVDPLVGHWREMFRYRKFKQGTKEEVDNIL 1264
Query: 1086 RIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRL 1145
R EK P RI Y F + +EHPG F L+Y++S N HHEY+ + PKGF+FR R + D+L
Sbjct: 1265 RAEKEANPARIPYYFSVCYEHPGVFTLSYLKSINVHHEYVSVSPKGFRFRHRYLDTPDKL 1324
Query: 1146 VAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGS 1181
VAYFQ+HI+DP ++ R+ AAMVP P GS
Sbjct: 1325 VAYFQKHINDPVPEAP-PRRAAAAMVPSGDPRKAGS 1359
>gi|168007981|ref|XP_001756686.1| transcription elongation factor SPT6 [Physcomitrella patens subsp.
patens]
gi|162692282|gb|EDQ78640.1| transcription elongation factor SPT6 [Physcomitrella patens subsp.
patens]
Length = 1249
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/1129 (45%), Positives = 733/1129 (64%), Gaps = 47/1129 (4%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERT- 111
GH SR + F LL++ K +IPFIAMYR+EECL LLK+L +EV++++ R
Sbjct: 141 GHLCLYSRSE---FQHLLNMDKYEIPFIAMYRREECLDLLKEL-TDEVSHEDRRTIYRLG 196
Query: 112 -PTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
L + LWA+H+ +KKWL+LQ+RKS LQ Y+ R I ++ LF
Sbjct: 197 RINLVLLQALWAVHEWNKKWLILQRRKSDLQDSYEMRIPIGIIAIPEK------DNLFKR 250
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
I +SL AE+E+ V D + +FNLHFP EV + + +KRPK + YS AGL +
Sbjct: 251 ILRSLADAESEQAVGDCEAQFNLHFPTVEVDMVDRGFKRPKCRSSYSCAHDAGLGSITKY 310
Query: 231 FGYSSEQLGLQLSLEKMG-------DELEDPKETPEEMASNF-----KCAMFNSSQAVLQ 278
FG +SE G L K G +E+ D P+++AS F F ++L+
Sbjct: 311 FGLTSEAFGDNL---KAGHKVNIDMNEILDEAFLPDDIASKFCNESGPTTQFRDPASILR 367
Query: 279 GARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLR 338
GARHM AVEIS EP VR+ VR + NA V+T PTP G ID+FHQF GVK +++K +
Sbjct: 368 GARHMLAVEISTEPSVRECVRMFYSKNATVNTRPTPAGMEIIDAFHQFEGVKLIKDKQIS 427
Query: 339 KFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
F+D QWLLI KAE EKL+ VT+ + ++S++ S+C+ + SDG + ++Q WN+QR+ I
Sbjct: 428 AFDDEQWLLIHKAEAEKLIDVTVGVSKESIDTFLSECEPLFSSDGSTCTSQHWNEQRKQI 487
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ------RKDNDIT 452
L++A LL M KEAR + AK ++ + LWNKVS+GPY RK +
Sbjct: 488 LQEATVTILLSKMEKEARMNLVTNAKRVVVAQCVLQLWNKVSIGPYDPAKGSGRKCRN-- 545
Query: 453 PDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER 512
+E +A RVLACCWGP TTFVMLD+ GE++++L TG L+ + Q K+NDQ R
Sbjct: 546 -EEGSALRVLACCWGPASKGTTFVMLDADGEILNILHTGYLSTKVFTPEQAQRKENDQSR 604
Query: 513 LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESL 572
LL+ ++D +PH+VVLGA + C L DI +++F++VE H D+ + +VYGDES+
Sbjct: 605 LLQVLIDFKPHIVVLGAATVQCQYLYRDISDVLFRVVERHAGDLAGRQGTIKLVYGDESI 664
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFL 632
P LYE SRIS QLPGQ G V+RAV LGRYLQNP+AM+A+LCGP +ILS K L++FL
Sbjct: 665 PILYETSRISQIQLPGQPGVVRRAVGLGRYLQNPVAMLASLCGPEMDILSVKFHSLQSFL 724
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ +E Y +IE+VMV VTNQVGLDIN AI +W F L F++GLGPRKA +++R++
Sbjct: 725 SNEELYDVIERVMVTVTNQVGLDINRAITHDWLFETLPFVAGLGPRKAGAIKRTIQMKRR 784
Query: 693 IFTRKD-FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
+ R D ++T LG+KVF N+ GF+RVR Q +S ++ LD+TRIHPE Y A+
Sbjct: 785 VLFRDDLYLTIQALGEKVFKNSAGFIRVRPIEQTSSEVHHLEPLDNTRIHPEWYQTARNF 844
Query: 752 AKEVYNRDIE-GDLNDDEDALEMAIEHVRDRPDLLKTYLLD---RHIKEKKRENKRETLY 807
A+ V +D + D D D+L MA+EHV PDLL T +L+ +++ N +TL
Sbjct: 845 AEAVIEKDPKRNDGEIDCDSLNMAVEHVMKNPDLLDTMVLEDFAECVQDDGNSNSIQTLE 904
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
LI+ EL HGFQ+ R Y EPS++E FY++SGE E+TL GR+VQAT+R+VQ + +CVLE
Sbjct: 905 LIKSELQHGFQECRKVYLEPSKEECFYLMSGEREETLFPGRIVQATIRKVQDNQVMCVLE 964
Query: 868 SGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQ 927
SGL G + KED SD D+E +++ EG ++TC++K++ ++ ++L C+ES+ R + Y
Sbjct: 965 SGLVGFIYKEDLSDHC-DAEPKERITEGSLVTCRVKNVNMEKFLIYLTCKESDFRRDFYG 1023
Query: 928 HCQNLDPYYHEERSSRQSEQEKARKEKE-LAKKHFKERLIVHPCFQNVTADEAMKLLSAK 986
+ D + +++ SEQEK RKE E KK FK R IVHP FQN++AD+A+K L+ K
Sbjct: 1024 DLHHDD----KPKTTLLSEQEKIRKENEDQHKKTFKLRPIVHPKFQNISADDAIKSLAEK 1079
Query: 987 EPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTF 1046
+ G+ IRPS +GP++L++TLK+ D +++H DI E K+H D+ S + +GKTL I ++++
Sbjct: 1080 DVGDFTIRPSCKGPAHLSITLKLSDDLFSHIDIAESDKEHWDLNSFLRLGKTLTIEDESY 1139
Query: 1047 EDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEH 1106
+DLDEV +Y+ LV+HL AML +RK+++G+K E+ + LR EK E P I Y F +SHE+
Sbjct: 1140 KDLDEVEVKYVSKLVTHLHAMLQFRKYKQGTKVEITDALRSEKTEKPKSIPYCFSLSHEY 1199
Query: 1107 PGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1155
PG F+L+Y+++T P HEYI L+P GF+FRK++F+ ID+LV YFQ H D
Sbjct: 1200 PGAFMLSYMKATTPFHEYISLFPSGFRFRKKVFDTIDKLVVYFQNHFHD 1248
>gi|298205078|emb|CBI40599.3| unnamed protein product [Vitis vinifera]
Length = 713
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/674 (64%), Positives = 528/674 (78%), Gaps = 25/674 (3%)
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
M+EE+PRDV +MD + IVYGDESLPR+YE+SRISSDQLPGQ G VKRAVALGR+LQNPL
Sbjct: 19 MMEENPRDVSQKMDGIRIVYGDESLPRIYEHSRISSDQLPGQLGIVKRAVALGRFLQNPL 78
Query: 608 AMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
AM+ATLCGPG+EILSWKL L LTPDEKY M+EQ+MVDVTNQVG+DINLA +W FA
Sbjct: 79 AMIATLCGPGKEILSWKLGSLGYLLTPDEKYEMVEQMMVDVTNQVGIDINLAAAHDWLFA 138
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGK-KVFVNAVGFLRVRRSGQAA 726
PLQF+SGLGP KA LQR+L+R GA+ RK + HGLG VF +AVGFLRVR G A+
Sbjct: 139 PLQFVSGLGPSKAGHLQRALIRIGAVTCRKKLI-EHGLGTMSVFRSAVGFLRVRCCGMAS 197
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
+SS +DLLDDTRIHPESY LA+ LAK+VY + E D DD LEMAI +VR+ P L+
Sbjct: 198 ASSN-MDLLDDTRIHPESYNLAKILAKDVY-KCFENDEIDDV-VLEMAIGYVRNHPKYLE 254
Query: 787 -----TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE 841
Y D IK K NKRETLY I+ EL+HGF+DWR+ Y+EPS+DEEF MI+GE
Sbjct: 255 DLKIFEYAKDYEIKHGK--NKRETLYDIKMELLHGFRDWRSPYEEPSEDEEFLMITGENG 312
Query: 842 DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCK 901
DTLAEG++VQATVR +Q +R CVL+SGL G+L K+ +SD+ + +L+ KL G+IL CK
Sbjct: 313 DTLAEGKIVQATVRSIQSERVFCVLDSGLDGILFKDGFSDERDEIDLTTKLQVGEILICK 372
Query: 902 IKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHF 961
IK I+KNR++V L C+E + R+++ Q+ +++DPYY E++SS EQEKA +KELAKKH
Sbjct: 373 IKQIEKNRHRVVLTCKEIQSRSSKDQNPRSVDPYYCEDQSSLSKEQEKA--QKELAKKHV 430
Query: 962 KERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIE 1021
K R+IVHP FQN+T +EAM+ LS K GES PSSRG SYL+LT+K+YDGVYAHK+I E
Sbjct: 431 KPRMIVHPRFQNITFEEAMEYLSDKAVGESTFHPSSRGSSYLSLTIKIYDGVYAHKEITE 490
Query: 1022 GGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEV 1081
GGKD KD SL+ +GKTLKIG++ FEDLDEV+DRY+DPLV+HLKAML+YRKFR+G KAEV
Sbjct: 491 GGKDQKDAMSLLHLGKTLKIGDENFEDLDEVMDRYVDPLVTHLKAMLNYRKFRRGKKAEV 550
Query: 1082 DELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFED 1141
D+LLR EK+++P RIVY FGI HEHPG FIL+YIR+TNPHHEYIGLYPKGFKFRK F++
Sbjct: 551 DDLLRAEKSDYPMRIVYCFGICHEHPGAFILSYIRNTNPHHEYIGLYPKGFKFRKHTFDN 610
Query: 1142 IDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGW--- 1198
IDRLVAYFQ+HI+DP + A SI+SVAAMVPMRSPA G T G GW +N GGW
Sbjct: 611 IDRLVAYFQKHINDPWPEKALSIQSVAAMVPMRSPAVGAPT---GGGW--ESNTGGWRGQ 665
Query: 1199 ---NRDRSSTPGSR 1209
+RD++ TP SR
Sbjct: 666 FNSSRDKTCTPSSR 679
>gi|357508997|ref|XP_003624787.1| Transcription elongation factor SPT6 [Medicago truncatula]
gi|355499802|gb|AES81005.1| Transcription elongation factor SPT6 [Medicago truncatula]
Length = 737
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/522 (63%), Positives = 393/522 (75%), Gaps = 38/522 (7%)
Query: 19 DGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLH--LQKLD 76
DG SI +ES WI QL G +P ++ + S + +L I +DDI RFL+L H +QKLD
Sbjct: 243 DGSSIDEESQWIVKQLKHGAIPWIRKKDSSS-QNKEELPIDQDDIARFLELHHHHVQKLD 301
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IP IAMYRKE+C SLLKDLEQ E +DN D +TP LKWHK+LWA+ DLD+KWLLLQKR
Sbjct: 302 IPLIAMYRKEKCSSLLKDLEQPEAGDDNWDKNIKTPILKWHKILWALQDLDRKWLLLQKR 361
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KSALQ YY R+EEES +YDE RL LN+ LF+S+ +SL+ AE+EREVDDVD KFNLHFP
Sbjct: 362 KSALQLYYNNRFEEESHCVYDEKRLNLNRLLFESVMRSLKEAESEREVDDVDSKFNLHFP 421
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
PGE GVD GQYKRPKR + YS+ SKAGLWEVAS+FG SSEQLGL LSL ++ ELEDPKE
Sbjct: 422 PGEAGVD-GQYKRPKRKSMYSTFSKAGLWEVASRFGCSSEQLGLCLSLVQL-QELEDPKE 479
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
TPEE+ASNF CAM+++ + L+ ARHM + +VST PT DG
Sbjct: 480 TPEEVASNFTCAMYDTLEEALKCARHMVCI-----------------STLLVSTSPTADG 522
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ IDS HQF+G+KWLREKPL KFEDAQWLLIQKAEEEKL+QVTIKLPE+ LNK
Sbjct: 523 NITIDSLHQFSGLKWLREKPLSKFEDAQWLLIQKAEEEKLIQVTIKLPEEYLNK------ 576
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
SAQLWN+QR+LIL DA FLLPSM KEAR ++ +AK W+ MEYGKA W
Sbjct: 577 ----------SAQLWNEQRKLILHDAFFRFLLPSMEKEARGILGNKAKHWVRMEYGKAFW 626
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLR 496
NKVSV PYQ+K+ND + D+EAA RV+AC WGPG P+TTFVMLDSSGEV DVL+TG LTL+
Sbjct: 627 NKVSVRPYQQKENDHSSDDEAATRVMACSWGPGNPQTTFVMLDSSGEVQDVLYTGSLTLK 686
Query: 497 SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
SQN DQQ KKNDQER+LKF+ DHQPHV+VLGA NLSCTS++
Sbjct: 687 SQNPNDQQRKKNDQERVLKFITDHQPHVIVLGAANLSCTSVE 728
>gi|384249266|gb|EIE22748.1| hypothetical protein COCSUDRAFT_47678 [Coccomyxa subellipsoidea
C-169]
Length = 1641
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 390/1150 (33%), Positives = 604/1150 (52%), Gaps = 117/1150 (10%)
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDF------ERTPTL-------------K 115
++P+IA YRK+ LL + + +V N + D +R P + +
Sbjct: 445 FEVPYIAQYRKQVADELLA-MRKGDVPNVTSKDESRRRQEKRQPEMPVGVVQAKHRRIRR 503
Query: 116 WHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQL-FDSISKS 174
W VLW +H + +W L +RK + Y+ E R N QL D + +
Sbjct: 504 W-DVLWYVHSMAMRWRALARRKEIRERAYQDALE----------RAPENAQLTIDRLLDT 552
Query: 175 LEAAETEREVDDVDLKFNLHFPP-----GEVGVDEGQ--YKRPKRSTKYSSCSKAGLWEV 227
L AE+ EV DV+ K+ L ++ +D+ +RPK+ + Y + KAGL V
Sbjct: 553 LRKAESPEEVADVEAKYKLKAAELAEGIADLNIDDQAPLTRRPKKISAYETLRKAGLEPV 612
Query: 228 ASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC--AMFNSSQAVLQGARHMAA 285
+ S+++LG L + + DP+ PEE A+ + F+S +A+L GAR MA
Sbjct: 613 VREMVISAQELGENLESQYKKHDCIDPRMMPEEFAAEHVVPGSAFDSPEALLHGARQMAV 672
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE-DAQ 344
E+ EP VR++VR+ FM AV+ST PTP G++ ID+FHQ+ VK LR KP+ FE +
Sbjct: 673 SEVVAEPEVRRFVRNKFMPAAVISTEPTPQGETIIDAFHQYGRVKRLRNKPVNMFEGEED 732
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLN-KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
+L I +AE+E LL V+I++PE+ L L E Y+S G S SA WN+QR IL +A+
Sbjct: 733 FLCIVQAEKESLLTVSIEVPEEELEGDLIKSLAEFYVSPGTSISANAWNEQRMAILHEAV 792
Query: 404 DNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLA 463
LLP+ E R + A+ AL + +V +D+++ R +A
Sbjct: 793 QQRLLPAFALELRGRLLADARH-------AALHHVRTV-----EDDEVVERR----RFMA 836
Query: 464 CCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD----QQSKKNDQERLLKFMMD 519
CWGPG P TT MLD +G++ D+LF G L+ ++ RD QSK D ER+ F+++
Sbjct: 837 VCWGPGDPATTLAMLDDAGQLSDILFAGQLSGPIRHSRDGLFIDQSKVKDAERIRDFILE 896
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH-EMDELSIVYGDESLPRLYEN 578
H+PHVV++GA NL C L D+ I+ ++E HP+ + ++ ++ IVY DE+L L++
Sbjct: 897 HRPHVVLVGATNLHCKQLHGDLRAIMDHILEHHPQFITRSDVGDVDIVYADETLAALWQT 956
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKY 638
S + + Q V+RAVAL R +PLA++A+LCGP EIL L PL+ L +
Sbjct: 957 SAAAQQDMGDQPPLVRRAVALARCALDPLAVLASLCGPSAEILGANLHPLQELLPKQDLL 1016
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
+ E++ + TNQVG+DIN H WQ AP+QF++GLGPRKA +L R++ R + TR D
Sbjct: 1017 AVAERICITATNQVGVDINRVAHNAWQAAPMQFVAGLGPRKAQALLRTVQREQHVTTRLD 1076
Query: 699 FVTAHG-LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYN 757
G LGK VF N G +RV SGQ ++ + LDDTR+HP Y LA+
Sbjct: 1077 MWKEFGVLGKNVFRNCAGSIRVAASGQDMGTADMVP-LDDTRVHPSFYDTTACLAQLALG 1135
Query: 758 RDIEGDLNDDEDALEMAIEHVRDRPDLLKTY----LLDRHIKEKKRENKRETLYLIRREL 813
D N D A++ V +P L+++ +L+R + TL I EL
Sbjct: 1136 SDRPDPRNGD----THAVDRVLSKPQLIESLNLMDVLERFKDDASLGKPLSTLRDICFEL 1191
Query: 814 IHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLES--GLA 871
+ + R + D+ F++++GE+ +TL GR+V ATV A L G+
Sbjct: 1192 VQPNGELRVEADRMGDDQAFWLLTGESPETLKPGRLVTATVMSSGRDDARVRLTDFGGVE 1251
Query: 872 GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN---RYQH 928
G++ + D S + D +D++ G +T +IK + ++ V L +++ N+ ++
Sbjct: 1252 GIVRRGDVSSNGEDISPADRMQRGQTITARIKLVTPTQFVVELTTASNDLMNDSAWEKEY 1311
Query: 929 CQNLDPYYH----EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLS 984
C D YY+ E++ R + KA++ +++ R I HP F+NV A +A +LL
Sbjct: 1312 CAKNDNYYYVLSEAEKAQRAVAEAKAQRSRQIVS-----RPIRHPYFKNVNAPQATELLK 1366
Query: 985 AKEPGESIIRPSSRGPSYLTLTLKVY----DG----VYAHKDIIEGGKDHKDIKSLVGIG 1036
G ++RPSSRG + +TLT+KV+ DG VY H ++ EG K+ G+G
Sbjct: 1367 DAAVGSYLLRPSSRGITQITLTIKVHGSEPDGQGTPVYMHHEVREGKKEE-------GVG 1419
Query: 1037 KTLKIGE-----------DTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKG---SKAEVD 1082
L++G + +EDLDE++ R+ DPLV++LK ++ +RK+R+G +
Sbjct: 1420 AHLRLGRPLSITLTGGRIEEYEDLDEILARFADPLVANLKQVMRHRKYREGYWEGHEGLK 1479
Query: 1083 ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDI 1142
E L EKA+ VY G + PGTF L YI +TNPH EY + P GF FR + +
Sbjct: 1480 EQLMAEKAQTKGGAVYLLGCKLDTPGTFYLGYIINTNPHREYFTVTPDGFYFRHEVRSKV 1539
Query: 1143 DRLVAYFQRH 1152
D ++ F++
Sbjct: 1540 DSVIGLFKQQ 1549
>gi|303276492|ref|XP_003057540.1| transcription elongation-nucleosome displacement protein Spt6
[Micromonas pusilla CCMP1545]
gi|226461892|gb|EEH59185.1| transcription elongation-nucleosome displacement protein Spt6
[Micromonas pusilla CCMP1545]
Length = 1683
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 372/1154 (32%), Positives = 591/1154 (51%), Gaps = 79/1154 (6%)
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLK---DLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
L + HL+ L+I FIA K+ LL+ D + + N ER + VL
Sbjct: 460 LLCMTHLEGLEIAFIAQNLKDRVAPLLRGRRDDSRPPPRDSNLAVLERR--VHRRDVLHE 517
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
+ + DK+ + +RK+ L + E D LA ++ E A E
Sbjct: 518 VLEWDKRHARMTRRKAELLRKFGGVVEVLGDDHPDLDELA-------ALMNKCEDARAEE 570
Query: 183 EVDDVDLKFNLHF---------PPGEVGVD----EGQYKRPKRSTKYSSCSKAGLWEVAS 229
+DDV+ K L F + G+ E + RP T Y+ K GL ++
Sbjct: 571 TLDDVEAKLTLRFDEEIHQFLTSEAKGGIKKSGAESTHVRPLNRTAYAHHRKKGLRDLLP 630
Query: 230 KFGYSSEQLGLQLSLEKMGDELED---PKETPEEMASNF--KCAMFNSSQAVLQGARHMA 284
+G + L L+ + E+ P PE+ AS + + + VL+ H+A
Sbjct: 631 MYGATPAALAQSLNSYRRNAGTENQVVPDMMPEDAASVYVGEETGYGDVSVVLKALTHVA 690
Query: 285 AVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ 344
A E+S EP VR ++R + A V T PTP G ID FH A VK L+ KP+ +F +
Sbjct: 691 AAELSVEPSVRAWMRVVVRRKAQVWTQPTPKGTIEIDPFHPLARVKRLQNKPISEFTGTE 750
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
+ + +A +E L+ + + LPE ++ + ++ ++ YL + VS+ A WN R+ L L
Sbjct: 751 FAAVLRAYDEGLITLRVALPEKVIDDVMAEAEQAYLLEDVSEIADAWNALRKDALHLGLK 810
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY--QRKDNDITPDEEAAPRVL 462
L S+ K A L++ A + + E G+ALW K+S P+ + K + D+E RVL
Sbjct: 811 KHLAVSLTKSATVLLAREAIAEVKRECGEALWPKISNRPWAPEIKSTEEYHDDEVDVRVL 870
Query: 463 ACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS-----KKNDQERLLKFM 517
A WGPG P TTF MLD+ GE+VD L + +R+ QS + D RL++FM
Sbjct: 871 AAVWGPGTPATTFAMLDAEGELVDFLECPNIAVRAAGPFAGQSAAGQRRDADMNRLVQFM 930
Query: 518 MDHQPHVVVLGA---VNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPR 574
++H+PHVV + A ++C L++ + + K+VE+H R + E++ + + + D+++P
Sbjct: 931 IEHRPHVVAVAASSNAGMNCKFLREAARQAVEKIVEDHARAIPEEVNTIEVHFVDDTIPA 990
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
L S ++L K V+ A +GRYL+NP +VA L G E S L L++ LT
Sbjct: 991 LAGASAAMREELREHKEEVRHATCVGRYLRNPAGIVAALASGG-EAASLTLSTLQDALTE 1049
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA--GA 692
DE+ + + + DV NQVG+D+N + WQ L +++GLG RKAA++ ++ + GA
Sbjct: 1050 DERLAVFTRALADVVNQVGVDVNACVAHPWQQKALNYVAGLGARKAAAVVAAVRASDGGA 1109
Query: 693 IFTRKDFVTAHGL-GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
+ TR + V G+ G VF NA LRV D+LD TRIHPE Y E+
Sbjct: 1110 LETRAELVYELGIVGPIVFRNAASSLRVVDD----------DILDATRIHPERYAQTFEI 1159
Query: 752 AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD-----RHIKEKKRENKRETL 806
+ D+E + +E D K LD ++ + + +TL
Sbjct: 1160 IANALDYDLEQLKKASKAVQRKTVERALDPEHWEKFAELDLRAYAEYLHGEGQGWIYQTL 1219
Query: 807 YLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ-------- 858
+R EL + D R ++ P+ EEF +++GETE +L EG++VQ TVR++
Sbjct: 1220 REVRVELHEPYGDIRGPWEPPTAWEEFALLTGETEHSLCEGKIVQCTVRKLVRPNPTMGI 1279
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIK--SIQKNRYQVFLVC 916
+ LESG+ G + KED SD+ + L DK+ G +++ ++K I V L C
Sbjct: 1280 NAEVLVSLESGVTGKIQKEDLSDN-HVNRLEDKVAVGQVISARVKPNGIDYEAGVVHLAC 1338
Query: 917 RESEMRNNRYQHCQ----NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQ 972
S + Q + PYY + + + K +K+++ ++ F R I HP FQ
Sbjct: 1339 AGSVLSREATQQWEAEKWGRTPYYSLQVMDGEIPKPK-KKKRQASRPSFIHRNINHPLFQ 1397
Query: 973 NVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSL 1032
NVTA +A ++L ++ GE ++RPSS+G ++L+LT+K YD +Y H DI EG K +
Sbjct: 1398 NVTALQAQEILKTQDIGEVLLRPSSKGVTHLSLTVKFYDDMYVHHDIKEGKKPGVGHTAN 1457
Query: 1033 VGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEF 1092
+ +G L + +EDLDEV R+++P+V++LKAM+ +RKFR+G+K +VD+ L+ E A
Sbjct: 1458 LALGSPLTVDGVEYEDLDEVYARHVEPMVTNLKAMIRHRKFRRGTKRDVDQRLKAEMARH 1517
Query: 1093 PTRIVYGFGISHEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
P Y +S EH G F L+ I +S N HHEYI + P+GF+FR+ F +DR++AYF+
Sbjct: 1518 PDTRPYALSVSFEHHGVFCLSSILSKSGNVHHEYISVKPEGFRFRRMEFPTVDRMLAYFK 1577
Query: 1151 RHIDDPQGDSAPSI 1164
+ P +AP++
Sbjct: 1578 VNPRAPV--AAPAV 1589
>gi|328865873|gb|EGG14259.1| SH2 domain-containing protein [Dictyostelium fasciculatum]
Length = 1633
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 361/1226 (29%), Positives = 599/1226 (48%), Gaps = 114/1226 (9%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
+E+ WIY A S K+ DL + I L + L++PFI Y+
Sbjct: 278 EEAEWIYEM-------------AYSSKDSRDLR-QIETISSILKFIQRDLLEVPFIYTYK 323
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYY 144
K D FE TL+ LW I+DLD+KW L K L+
Sbjct: 324 K--------------------DIFETYFTLQ---DLWNIYDLDEKWAHLVNSKRNLEGII 360
Query: 145 K-----KRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGE 199
+ Y R E +A LF ++ L+ R + FN PP +
Sbjct: 361 NNNPRLEHYLSSVRECKSEEGIADFYDLFQWVN-GLDQNNINRNLLTNGEDFNP--PPTQ 417
Query: 200 VGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPE 259
+ ++KR + Y+ +KAGL E +G S+++ G+ L M + D E P
Sbjct: 418 ----QPRFKRAIKRDLYTIYAKAGLCEFLKYYGMSAQEFGINLMDNFMTNMPTDHSEDPS 473
Query: 260 EMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSA 319
A+ F C ++ + VL+ R++ A +I +P VR+ +R I+ A ++T PTP G
Sbjct: 474 TAATQFICLEADTMEEVLKATRYLMAHDIGFDPNVRQSIRVIYRRYAYITTTPTPHGFKE 533
Query: 320 IDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPED-SLNKLFSDCKEH 378
ID+FH + VK +REKP +F+D Q+LLI KAE+E ++ +I +P +N + +
Sbjct: 534 IDAFHPYITVKNIREKPFLQFDDTQYLLILKAEKEGYIKTSIGIPSTVHINTILPEMDSL 593
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
YLSDG S +Q WN +R IL DAL FL P KE R+ + A + + E K+L K
Sbjct: 594 YLSDGTSAISQQWNKERRSILADALTKFLYPLFDKEIRNKLLTEASNRVAFECAKSLEEK 653
Query: 439 VSVGPYQRKDNDI------------TPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVD 486
+ V P+Q ++N + + ++++ CWG GK T V+LDS EVV
Sbjct: 654 LRVAPWQPQNNSSSDDDDDEYESDDNNNRKRTFKIMSFCWGSGKIPTMAVVLDSEAEVVA 713
Query: 487 VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
L R Q K++D RL + + HQP +V++ + L D + + +
Sbjct: 714 HAKFDFLCDRVGETMVQGKKQDDDARLHQMLKQHQPRLVLVSGTEMESRQLLDVVRDHVN 773
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
++ +++ + + + + + +N+ +D+ +K A+A+GR +P
Sbjct: 774 RLTDDNALKKS-----VDVYFANPEIGLALQNNAKLTDEFKEYPAVLKHAIAVGRCALDP 828
Query: 607 LAMVATLC-GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
L + LC G +IL KL PL++ + D ++ + ++V N VG+DIN I ++
Sbjct: 829 LTEYSNLCVGSTNDILYLKLNPLQDMIGKDYLLKLLHRCFINVVNAVGVDINKFIRHKFA 888
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV-FVNAVGFLRVRRSGQ 724
PLQF++GLG RKA +L S++R G + + + G+ V + N +GF+++R +
Sbjct: 889 AGPLQFVAGLGSRKAQALLNSVIRRGGFISSRTTIEKLLNGQDVVYKNCIGFIQIRE--K 946
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL 784
+ + LDDTRIHPE Y A ++A + ++ + D ++D +E E + +P+
Sbjct: 947 YFDDYRDFNPLDDTRIHPEDYTSAYKIAADALDKSV--DFHEDSSVIEFVSE-IMTKPNK 1003
Query: 785 LKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE 841
L+ LD ++ + K++ LY+I+ EL F D RN Y P+ D+ F ++GET+
Sbjct: 1004 LELIDLDAFADILESRNNTQKKKVLYMIKNELTSPFADIRNYYHPPTYDQIFTWLTGETD 1063
Query: 842 DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCK 901
+T G +V + R + C LE+GL ++ SD D+ + G L+C+
Sbjct: 1064 ETFKSGTLVSVSTIRNSPEGVRCRLENGLEAVIP----SDCISDTGDTKSFPRGTTLSCR 1119
Query: 902 IKSIQKNRYQVFLVCRESEMRNNRYQHC-------------QNLDP------YYHEERSS 942
+KS+ K R+ V L C+ S+M ++++ NLDP S
Sbjct: 1120 VKSVDKERFNVTLSCKPSDMDISKWEDMIYHDLKMNGDNKYLNLDPTPPTALLTMTSLSG 1179
Query: 943 RQSEQEKARKEKE-LAKKHFKE-RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGP 1000
+ KA E+ + KK ++ R +VHP ++++ EA K L K GE+I+RPSSRG
Sbjct: 1180 GNNGNSKALVERRPVPKKEARQKRNVVHPLWKSMNFMEAEKYLKDKPVGEAILRPSSRGH 1239
Query: 1001 SYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPL 1060
++T+T K +DG+ H DI E K + V +GK+ +GE F+ LDE++ R+++ L
Sbjct: 1240 DHITVTFKFWDGIILHHDIKEADK-----PNAVSLGKSFYMGETKFDSLDEILARHVEYL 1294
Query: 1061 VSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNP 1120
+++L + ++R ++ GSK E+DE +R EK++ P I Y FGI+ E PG +L ++ S +P
Sbjct: 1295 INNLNDVKTHRYWKSGSKDEIDEFMRKEKSKNPKHIPYRFGIAIERPGYIVLYHVPSNSP 1354
Query: 1121 HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGG 1180
HEYI + P+GF+ RK+M+ +D L+ +F+ + A + R P N
Sbjct: 1355 RHEYILVKPEGFEMRKKMYASLDELIKHFKNNYAQLLQQQAAQQQHQQMSSLQRPPVNKP 1414
Query: 1181 STASAG-------SGWGGSTNEGGWN 1199
S S S + GW+
Sbjct: 1415 SPTSVANNNNNSLSAYKPPAQSSGWS 1440
>gi|145353165|ref|XP_001420894.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581130|gb|ABO99187.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1245
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 352/1135 (31%), Positives = 614/1135 (54%), Gaps = 83/1135 (7%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDL--EQNEVNNDNNDDFERTPTLKWHKVL 120
I L L L+IP+I R+++ L LL+ E ++ D+++R L+ V+
Sbjct: 140 IALLLTLTFDHHLEIPYIVSQRRDDLLPLLRGRAEEARPALTEDGDNYQRL--LRRFDVI 197
Query: 121 WAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAET 180
AI + D++++ L+ RK+ + S ++ E+ + + + +Q + + A
Sbjct: 198 DAIMEWDERYVKLELRKARIASALEQAANEKG----ESEQGHVARQCMELV----RVAYL 249
Query: 181 EREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGL 240
++ VDD + K NL F + + +RP R T+Y + K G+ ++ + G ++E G
Sbjct: 250 DKHVDDAEAKANLFFASLDAN---SKLRRPGRKTQYDAHVKRGIRDLVNMSGPTAEAFGE 306
Query: 241 QLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+ + EL TPE++A + + +S V+Q ++AA EI E VRK+ R
Sbjct: 307 AIK-SGIPSELM-ANLTPEDVAKVYFDQGYANSDEVMQAFVNVAATEIGAESEVRKWFRD 364
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVT 360
F+ +A ++T PTP+G ID +H A VK L + P+ + Q+ I + + LL+V
Sbjct: 365 EFLGHATITTQPTPEGTDIIDPWHPIAPVKRLLKMPVYILQGEQFAQILEGKRRGLLKVD 424
Query: 361 IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMS 420
I ++ L + ++ YLS+ +S A WN+ R +++ AL+ LLP+ +E S ++
Sbjct: 425 IGFGDERLTSVIERMEKAYLSESMSDLASTWNEVRRRVIRAALEEHLLPTFSRETASQLA 484
Query: 421 GRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDS 480
A+ L WN + P++ + T D++ RV+A G P TFV LDS
Sbjct: 485 LDARDALNRACADGAWNYICHAPWRPAN---TEDQDIEVRVVAAV--SGSP-ATFVALDS 538
Query: 481 SGEVVDVLFTGCLTLRSQ-----NVRDQQ--SKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+GE+VD F C TL NV Q +++++ + L+ F++ H+PHV +GA +
Sbjct: 539 AGELVD--FIQCHTLGRNIGGPGNVGGAQMMNQQDEIQALMDFIVQHRPHVCCVGASGMD 596
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
+K+ + ++ +++EE PR + E+ E+++ + D+S+ +L EN++ + ++P Q+ +V
Sbjct: 597 SKRVKESLNLVVGRIIEEQPRAIPEEVSEIAVHFVDDSVAKLCENAKETKAEMPEQQPSV 656
Query: 594 KRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLEN-FLTPDEKYGMIEQVMVDVTNQV 652
RAVALGR L NP A+VA+L G E+ S ++CPL++ L+ D++ ++E+ ++++ NQV
Sbjct: 657 LRAVALGRGLLNPAAVVASLVSGG-EVASLRMCPLQDSMLSKDDRVAIVERQLINLVNQV 715
Query: 653 GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL--VRAGAIFTRKDFVTAHGLGKKVF 710
G+D+N+A W L+++ GLGPRKA + ++ G + +R+D +A LG+ VF
Sbjct: 716 GVDVNMASAHPWCSVLLRYVGGLGPRKATLVINAVRTTEGGVVDSREDLKSA--LGEVVF 773
Query: 711 VNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND-DED 769
NA FLR+ + D+LD TR HPE Y Q +A V ++E +L D+
Sbjct: 774 RNAASFLRITEA----------DMLDSTRCHPERY--EQAMAIVVNALELEANLAAMDKY 821
Query: 770 ALEMAIEHVRD--------RPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWR 821
E ++ V D P +L+ Y +++ + E L IR E H F++ R
Sbjct: 822 ERERILQKVFDPKTWEQKVAPLILEEYA--EYLESEGAGKSLEALREIRIEFRHPFEELR 879
Query: 822 NQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ------GQRAICVLESGLAGMLM 875
+ + ++EF +++GET TL+ G+++Q TV++++ G RA+C L+SGL G +
Sbjct: 880 PPWMPLTAEDEFALLTGETMHTLSAGKLIQCTVKKIEGPRDGRGARAVCTLDSGLTGYVE 939
Query: 876 KEDYSDDWRDSELSDKLHEGDILTCKIK--SIQKNRYQVFLVCRESEMRNN------RYQ 927
K D SDD S + +K+ G ++T ++K + + + V L C S + + ++
Sbjct: 940 KYDVSDDQSFSRIEEKVALGQVITARVKPDGVDVHNFSVQLACSSSALHPDETLQWEQHL 999
Query: 928 HCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKE 987
H + YY + + +K + +K++ K+ F R I HP FQNV+ EA++ L +
Sbjct: 1000 HYTEANGYYSMVKQPGEVRLKKQKSKKDMQKRTFVPRNIDHPNFQNVSWAEAVERLDTAD 1059
Query: 988 PGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFE 1047
GE IIRPS RG + ++KVYDGV ++ +I E KD + +L G+G L I ++ +E
Sbjct: 1060 IGEVIIRPSGRGTKNIDCSIKVYDGVVSNINIKETKKD-SGVGNL-GLGTPLIIDDEEYE 1117
Query: 1048 DLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
DLDEV+ R+I+P+VS++K ML +RKF +GS ++D L+ + A P Y G+ +
Sbjct: 1118 DLDEVMARHIEPIVSNVKHMLKHRKFMRGSAEDIDNALKQQLARNPGIRPYALGVVEQRV 1177
Query: 1108 G----TFILTYIRSTN--PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
F +++I S++ HHEYI + P GF +RK F +DR++AYF+ + P
Sbjct: 1178 NKGMVLFCISFIMSSSGRVHHEYIKVIPAGFYYRKMEFPSVDRMLAYFKVNCSKP 1232
>gi|156362269|ref|XP_001625702.1| predicted protein [Nematostella vectensis]
gi|156212547|gb|EDO33602.1| predicted protein [Nematostella vectensis]
Length = 1493
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 378/1297 (29%), Positives = 629/1297 (48%), Gaps = 174/1297 (13%)
Query: 10 RKALAGPP---TDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSI----SRDD 62
R L G P TD + DE+ WIY LP+ Q G+ ++ +
Sbjct: 147 RFQLRGVPVKETDEGELEDEAEWIYKHAFL-YLPISQQDVTEQGIHGNPPALKPHTAVGK 205
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I L+L+ Q ++PFIA YRKE + E+N D+ LW
Sbjct: 206 IREALNLMRNQFFEVPFIANYRKEYV--------EPELNIDD---------------LWK 242
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKR--YEEESRRIYDETRLALNQQLF--DSISKSLEAA 178
+ + D+KW L+ RK L +++ Y+ R ET LA + ++ + I + L+
Sbjct: 243 VFEWDEKWTQLRTRKQNLHRLFEQMQDYQFNKARDDSETPLADDVRILQPEDIDR-LDQV 301
Query: 179 ETEREVDDVDLKFNLHF---PPG-----------------------------EVGVDEG- 205
+T ++ DV F L++ P ++ DEG
Sbjct: 302 QTMEQLKDVYSHFMLYYGNELPAMHEARKKKAKEEREQKRLENENEEEAVEPKIDYDEGP 361
Query: 206 QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF 265
+ K+P + YS C ++GL +A KFG + +Q G L E E E A F
Sbjct: 362 KLKKPMKKDLYSICRQSGLGTLAKKFGLTPDQFGENLRDNYQRHETEQHPLELAEAAEQF 421
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQ 325
+ +MF ++ VL+G RHM A++I+ +P VR+ VR + A +S PT G ID H
Sbjct: 422 QTSMFATTDQVLEGTRHMVAMQIARDPLVRQCVRETYYKRATLSVSPTKKGKKEIDESHP 481
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPED-------SLNKLFSDCKEH 378
K+L++KP+R Q+L + AE E LL ++I + +L F + K+
Sbjct: 482 CYTFKYLKQKPVRDLRGDQYLKLSMAEAEGLLNISISIDIANSTGWVVNLMTYFDEVKQL 541
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
Y D S Q WN QR L A L P++ KE ++ + +K++++ L +
Sbjct: 542 YYRDEFSLLVQEWNGQRMQALSRAFYQMLYPALEKELKTKLLTESKNFVIKSCRNKLKSA 601
Query: 439 VSVGPYQRKDNDITPDEEAAP------RVLACCWGPGKPETTFV-MLDSSGEVVDVLFTG 491
+ V PYQ + PD+E RVLA + P F+ MLD G+V D L
Sbjct: 602 IEVAPYQPEQQ---PDQEYEDMGGDGFRVLALSYLPDPTVPAFLAMLDGEGQVTDYLRLK 658
Query: 492 CLTLRSQNVR--DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
L +R R ++++K+ D E L +F++ +P V+ + AV+ T++ +DI + ++
Sbjct: 659 SLLVRRNAYRQSEREAKEKDMESLKEFILKKRPQVIAVAAVSREATTIVEDIKLCLAELE 718
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
+E H+M + + D + R+Y+ S + ++ ++ AV++GR LQ+P+
Sbjct: 719 QE------HQMSPIGVELVDGEVARIYQTSIRADNESREYPPVLRHAVSVGRRLQDPVTE 772
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
A LC E+L K PL++ + ++ + + V V N VG+D N + L
Sbjct: 773 FAGLCIEEDELLCIKFHPLQDEVDKEQLIRALHEEFVTVVNDVGVDPNRLLDHAHVIPLL 832
Query: 670 QFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
QF+ GLGPRKAA+L + L + G+ + R VT LG K+F+N GF+++ + +S
Sbjct: 833 QFVCGLGPRKAAALLKCLRQQGSRLENRSQLVTLCNLGPKIFLNCAGFIKIDTQAISDTS 892
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTY 788
+ ++++LD +R+HPE+Y A+++A + +E D +E+ A+E + + PD LK
Sbjct: 893 TNYVEVLDGSRVHPETYEWAKQMAVDA----LEYDEATEENNPSAALEEILEAPDRLKDL 948
Query: 789 LLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
LD +E +R+ NKR TLY IR EL + + R ++ S ++ F +++GET +TL
Sbjct: 949 DLDAFAEELERQNYGNKRITLYDIRDELFGRYAERRVPFRPLSVEDRFKVLTGETSETLY 1008
Query: 846 EGRVVQATV------------------RRVQG----QRAICV------------------ 865
G++V TV +V+ Q C+
Sbjct: 1009 VGKMVMCTVTGFAFRKPSHDMVDQANPEKVEDTGLWQCPFCLKNDYPELSEVWTHLDNGS 1068
Query: 866 -----------LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+E+G++G + + SD S +++ G L C++ + R+QV L
Sbjct: 1069 CPGNATGVRVRMENGISGFIPTKMISDKHIKSP-QERVKPGMTLHCRVTRMNMERFQVDL 1127
Query: 915 VCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKK-----HFKERLIVHP 969
CR S++ + + D YY ++ +EK +KE E AKK + +R+IVHP
Sbjct: 1128 SCRSSDLADKDKKFSLPFDLYYDKD------AEEKDKKEDETAKKKANRPKYIKRVIVHP 1181
Query: 970 CFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDI 1029
F+N++ EA ++LS + GESI+RPSS+G +LT+T KV G+Y H DI E GK++
Sbjct: 1182 AFRNISFKEAERILSELDQGESIVRPSSKGSDHLTVTWKVDQGIYQHIDIREEGKENA-- 1239
Query: 1030 KSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLR 1086
+G +L I + FEDLDE++ R+I P+ + + +L+++ +R GSKA+++ELL
Sbjct: 1240 ---FSLGHSLWIDTEEFEDLDEIIARHIQPMAALAREILNHKYYRAADGGSKAKLEELLV 1296
Query: 1087 IEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLV 1146
+EK + P RI Y S E PG F+L Y+ P E++ + P+GF++R R+ ++ L
Sbjct: 1297 LEKKKAPQRIPYFLSASKEFPGKFLLGYLPRVKPRVEFVSICPEGFRYRGRVHGTLNALF 1356
Query: 1147 AYFQRHIDDPQGDSAPSIRSV-AAMVPMRSPANGGST 1182
+F+ H D P +R+ AM +P G+T
Sbjct: 1357 KWFKEHFRDQIPGVTPRMRTTPVAMSESNTPYTPGAT 1393
>gi|449515211|ref|XP_004164643.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
sativus]
Length = 482
Score = 498 bits (1282), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/318 (79%), Positives = 284/318 (89%), Gaps = 9/318 (2%)
Query: 982 LLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI 1041
LLS K+PGESI+RPSSRGPS+LTLTLK+YDGVYAHKDI+EGGK+HKDI SL+ IGKTLKI
Sbjct: 95 LLSDKDPGESIVRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKI 154
Query: 1042 GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFG 1101
GEDTFEDLDEV+DRY+DPLV+HLKAMLSYRKFR+G+KAEVDEL++IEK+E+P RI+YGFG
Sbjct: 155 GEDTFEDLDEVMDRYVDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIIYGFG 214
Query: 1102 ISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSA 1161
ISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQ DSA
Sbjct: 215 ISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSA 274
Query: 1162 PSIRSVAAMVPMRSPANGGSTASAGSG-WGGSTNEGGW-----NRDRSSTPGSRTGRNDY 1215
PSIRSVAAMVPMRSPA GGS+A++ WGGS++EGGW +RDRSSTPGSRTGRND
Sbjct: 275 PSIRSVAAMVPMRSPATGGSSAASAGSPWGGSSHEGGWRSQSFDRDRSSTPGSRTGRNDN 334
Query: 1216 RNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYDTPKWDSANKSGDDSW 1275
RN GRDGHPSGLPRPYGGRGRGRGS N+NRG N++R DS YD +WDS++K GDD
Sbjct: 335 RNSSGRDGHPSGLPRPYGGRGRGRGSYNNNRG---NNDRSDSGYDGSRWDSSSKDGDDGL 391
Query: 1276 GNFPGAKAQNPAGREAFP 1293
NFPGAK N G+EAFP
Sbjct: 392 SNFPGAKIHNSPGKEAFP 409
>gi|405967592|gb|EKC32733.1| Transcription elongation factor SPT6 [Crassostrea gigas]
Length = 1649
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 402/1459 (27%), Positives = 669/1459 (45%), Gaps = 203/1459 (13%)
Query: 17 PTDGESIVDESTWIYNQLLSGTLP-----LFGQRGAGSPKEGHDLSISRDDIMRFLDLLH 71
PT+ I +ES WIY Q S T P L Q + G + + I + +D +
Sbjct: 248 PTEEGEIEEESEWIYKQAFS-TPPTSQQNLLEQESGTYNRRGPTMI---NKIKKAIDFMR 303
Query: 72 LQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWL 131
Q L++PFIA YRKE S DL N+ LW + D+KW
Sbjct: 304 NQHLEVPFIAFYRKEYVES---DLNIND--------------------LWKVWQWDEKWT 340
Query: 132 LLQKRKSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDL 189
L+ RK L ++K Y+ ++ D+ + L D + +T E+ DV
Sbjct: 341 QLRTRKQNLIKLFEKMQNYQFDTNSDPDKVLETNVRPLTDEDLDRVRNVQTMEELKDVYQ 400
Query: 190 KFNLHF-------------PPGEVGVDEGQ------------YKRPKRSTKYSSCSKAGL 224
F L++ +V ++G+ K R T Y+ C + +
Sbjct: 401 HFLLYYGMDIPKMKMAQMKKKSDVEKEDGEAEPEPEIEPTDTIKHATRKTGYNICQEKKI 460
Query: 225 WEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMA 284
++A KFG + EQ G L ++E P E+A C+ F + + VL GARHM
Sbjct: 461 DDIAEKFGLTPEQFGENLRDNYQRHDVEQYPIEPLELAKEKICSQFPTEEEVLLGARHMV 520
Query: 285 AVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ 344
A++IS +P VR+ VR + + A ++ PT G ID H +K+L+ KP+R +D Q
Sbjct: 521 AMQISHDPTVRQVVRQAYFERAKIAVRPTKKGIKEIDESHACFSMKYLKNKPVRDLKDEQ 580
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLN--KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDA 402
+L + AEE++L+ V+ + +S N + + ++ Y D S Q WN QR L+ A
Sbjct: 581 YLKLVTAEEDRLITVSFSIDGESENTQTYYEEIRQLYYRDEFSHLVQQWNLQRSQALERA 640
Query: 403 LDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR----KDNDITPDEEAA 458
L L P M KE R+ + AK ++ + L+N + V PYQ +DN+ E+
Sbjct: 641 LTKLLYPQMEKELRAKLLSEAKDGIVKACCRKLYNWLKVAPYQADQQLEDNNY---EDEG 697
Query: 459 PRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVR--DQQSKKNDQERLLK 515
RVL + K F V++D+ G+V D L L +R R D++ K+ND +L +
Sbjct: 698 LRVLGIGYSTDKDTAAFGVLIDAEGQVTDFLRLEYLCMRKNAFREVDRKGKENDLSKLKE 757
Query: 516 FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRL 575
F+ +PHVV + A + + +++ +I ++ EE EM +++ D + +
Sbjct: 758 FIATKKPHVVAVTAESKEALRIVEEVQRLIQELTEE------AEMPAINVELVDNEVAMV 811
Query: 576 YENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPD 635
YENS ++ A+++ R LQ+PL A LC P +IL K P ++ + D
Sbjct: 812 YENSNKGQSDFREYPVVLRHAISVARRLQDPLIEFAQLCNPDEDILCLKYHPYQDQIPKD 871
Query: 636 EKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IF 694
+ V+ N+VG+DIN A+ +QF+ GLGPRK A L + L + +
Sbjct: 872 VLLNALTLEFVNRVNEVGVDINRALAHPHTAPLVQFVCGLGPRKGAHLLKILKQNNIRLE 931
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
R VT +G KVF+N GF+++ S+ ++++LD +R+HPE+Y A+++A +
Sbjct: 932 NRTQLVTLCHMGPKVFINCAGFIKIDTFSLMDSTDSYVEVLDGSRVHPETYEWARKMAVD 991
Query: 755 VYNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIR 810
D + EDA A+E + + P+ L+ LD +E +R+ +K TLY IR
Sbjct: 992 ALEYD-----DTAEDANPAGALEEILESPERLRDLDLDAFAEELERQGYGDKHITLYDIR 1046
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDT-----LAEGRVVQATVRRVQGQR---- 861
EL H ++D R Y+ P +E F MI+ ET +T L GRV+ RR +G++
Sbjct: 1047 AELNHRYKDLRTPYRSPLNEERFNMITKETPETFFVGKLVLGRVIGIAHRRPRGEQLDQA 1106
Query: 862 -------------AIC-----------------------------VLESGLAGMLMKEDY 879
C +L++G+ G L ++
Sbjct: 1107 NPVRNDDTGLWQCPFCNRSDFPELSEVWSHFDAGSCPGSAVGVKIILDNGVNGFLHTKNI 1166
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNLDPYYH 937
SD S +++ G + C+I I +R+QV L + S++ R+N ++ ++L Y+
Sbjct: 1167 SDKHIKSP-EERVKPGMTIHCRITKIDIDRFQVDLTSKSSDLIDRDNNWRPPKDL---YY 1222
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSS 997
++ + ++++ K K A++ + +R+I HP F NV E KLL + + GE+IIRPSS
Sbjct: 1223 DQEQEDKDKEKEEEKVKHKARQTYVKRVIAHPSFHNVGYRECEKLLESMDQGEAIIRPSS 1282
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYI 1057
+G +LT+T KV DG+ H D+ E GK++ +G +L IG + FEDLDE++ R+I
Sbjct: 1283 KGSDHLTVTWKVADGIMQHIDVREEGKENA-----FSLGSSLFIGSEEFEDLDEIIARHI 1337
Query: 1058 DPLVSHLKAMLSYRKFRK--GSKAEV-DELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
P+ + + +++++ +++ G K E+ +++L EK + P+RI Y ++ ++PG +L+Y
Sbjct: 1338 QPMAAFARDVMNFKYYKESDGGKREILEKILLEEKKKGPSRIPYYLTLTKQYPGKIMLSY 1397
Query: 1115 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMR 1174
+ P HEYI + P G ++R++ F ++ L+ +F+ H DP + S R+
Sbjct: 1398 MPRIKPRHEYISITPDGLRYRQQNFHSLNSLMRWFKEHFRDPIPGTPASARTPVPGSNFA 1457
Query: 1175 SPA------NGGSTASAGSGWGGSTNE------GGWNRDRSSTPGSRTGRNDYRNGGGRD 1222
+P+ + + A +G + R TPG G G +
Sbjct: 1458 TPSINLQGVDAATIQRAAAGLPSNIYNTLAQVASATPRVSRMTPGVTPGATPQVAGNFTN 1517
Query: 1223 ----------------GHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDS-SYDTPKWD 1265
HP P +N+ + S R + TP W
Sbjct: 1518 FNVPMGTPMMTPMMTPSHPMTTP--------------ANQTAQTPSYRPTPRAATTPAWP 1563
Query: 1266 SANKSGDDSWGN-FPGAKAQNP-AGREAFPGGWGSSGG-----GGSSGWGGASDGDNG-G 1317
A G+ P + Q P AG A W + GS+ G G + G
Sbjct: 1564 GATPKATPRIGSTTPQHQGQTPRAGPSAAGMDWAKAAQMWAKRSGSTKPGTPRHGQSPRG 1623
Query: 1318 WGHSSGGADKDSGWGGGGS 1336
S + + G+GGG S
Sbjct: 1624 VRPSPRPSPRQEGYGGGDS 1642
>gi|260820648|ref|XP_002605646.1| hypothetical protein BRAFLDRAFT_128224 [Branchiostoma floridae]
gi|229290981|gb|EEN61656.1| hypothetical protein BRAFLDRAFT_128224 [Branchiostoma floridae]
Length = 1823
Score = 488 bits (1255), Expect = e-134, Method: Compositional matrix adjust.
Identities = 317/1053 (30%), Positives = 540/1053 (51%), Gaps = 94/1053 (8%)
Query: 202 VDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEM 261
D Q K+ R YS C AGL +A KFG + EQ G L E + P ++
Sbjct: 542 ADTAQLKQASRRDMYSICETAGLGGLAKKFGLTPEQFGENLRDNYQRHETDQYPAEPNDL 601
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
+ F + F S + VLQGARHM A+++S EP VR+ VR + + A VST PT G ID
Sbjct: 602 SKEFVNSQFPSEEKVLQGARHMVAMQLSREPLVRQCVRQTYFERAKVSTKPTKKGRKEID 661
Query: 322 SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLS 381
H K+L+ KP++ Q+L + AE+E LL+ + + ++ F + K+ Y
Sbjct: 662 EMHYGYTFKYLKNKPVKDLTGDQFLKMSIAEDEGLLKTHVSIDGETTQSYFEEIKQLYYR 721
Query: 382 DGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
D S Q WN QR ++L+ L L P M KE RS + +K ++ + L+N + V
Sbjct: 722 DEFSHLVQEWNTQRTMVLERMLKFILYPQMEKELRSKLVQESKDGIIKSCCRKLYNWLKV 781
Query: 442 GPYQRKDNDITPDE-------EAAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCL 493
PYQ + DE RV+ + +F ++D G+VVD L L
Sbjct: 782 APYQPEQQIEEEDEYIEGMGSSKGLRVMGLAYSSDWDTASFAAVIDGEGDVVDFLRLAHL 841
Query: 494 TLRSQNVR--DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
R R D+++K +D E + +++ +PHV+V+GA N S+ DD+ + ++ EE
Sbjct: 842 MKRRNAYREADRENKLSDMESIKNLILNKKPHVIVIGAENRDAQSVIDDVKLCVKELEEE 901
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
++ +++ D L R NS + + +++A++L R +Q+PL +
Sbjct: 902 ------QQLAPIAVELLDNELSRFIMNSPRAEAEHRDYPPLLRQALSLARRMQDPLIEFS 955
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
LC ++L + L+ ++ ++ +E ++ N+VG+DIN + QF
Sbjct: 956 QLCVNNDDLLCLRFHTLQEQVSREDLLHALELEFINRVNEVGVDINRCVANNHTTTLAQF 1015
Query: 672 ISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
+ GLGPRKAA +Q+ L + A + R V +G KVF+N GF+++ + S Q
Sbjct: 1016 VCGLGPRKAAYIQKVLKQNNARLENRNQLVMMCHMGPKVFMNCAGFIKI-DTKSLGDSEQ 1074
Query: 731 FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
+I+LLD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ LK L
Sbjct: 1075 YIELLDGSRVHPETYDWARKMAVDA----LEYDESAEDANPAAALEEILETPERLKDLDL 1130
Query: 791 DRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
D +E +R+ NK TLY IR EL ++D R ++ P+ +E+F M++ ET +T G
Sbjct: 1131 DAFAEELERQGFGNKSITLYDIRAELNSMYKDLRTPFRSPTVEEKFNMLTKETPETFYIG 1190
Query: 848 RVVQATV-----RRVQGQR----------------------------------------- 861
++VQ V RR QG +
Sbjct: 1191 KLVQCRVTGIAHRRPQGDQLDQANPVRSEETGLWRCPFCQKDTFPELSEVWNHFDSSECP 1250
Query: 862 -----AICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVC 916
A+ L++G++G + + SD S +++ G + +I I R++V L C
Sbjct: 1251 GQATGAVTRLDNGVSGFIPTKMISDKHVKSP-EERVKPGMEVYTRIIKIDIERFRVDLSC 1309
Query: 917 RESEMRNNRYQHCQNLDPYY-HE-ERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNV 974
R S++ + + D YY HE E + R+++ E +K+ A+ + +R+IVHPCF N+
Sbjct: 1310 RSSDLADTNGDYRPARDLYYDHETEETDRKADDEAKKKQ---ARTTYVKRVIVHPCFHNI 1366
Query: 975 TADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG 1034
+ +A+KL+ +++ G+ I+RPSS+GP +LT+T KV DG+Y H D+ E GK++
Sbjct: 1367 SYKQAVKLMESQDQGDVIVRPSSKGPDHLTVTWKVDDGIYQHIDVREEGKENA-----FS 1421
Query: 1035 IGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAE 1091
+G++L I + FEDLDE++ R+I P+ S ++ + +++ ++ G + +++++R EK +
Sbjct: 1422 LGQSLWINNEEFEDLDEIIARHIQPMASFVRDLTNHKYYQAAEGGKREAIEKIIRDEKKK 1481
Query: 1092 FPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQR 1151
P++I Y S E+PG F+L+Y T+P HE++ + P GF+FR+ + ++ L +F+
Sbjct: 1482 APSKIPYIISASKEYPGKFLLSYQPKTSPRHEFVTVTPDGFRFRQLIHHSVNALFRWFKE 1541
Query: 1152 HIDDPQGDSAP-SIRSVAAMVPMR---SPANGG 1180
H DP + P ++R M P R +PA G
Sbjct: 1542 HFRDPIPGATPVNVRHRTPMAPSRPENTPAPSG 1574
Score = 40.0 bits (92), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 36/179 (20%)
Query: 29 WIYNQLLSGTLPLFGQRGAGSPKEG--HDLSISRDD------IMRFLDLLHLQKLDIPFI 80
WIY TLP+ Q P+EG + SR + I L+ + Q ++PFI
Sbjct: 329 WIYKYAFM-TLPISMQEFPDKPEEGGGYGSMYSRKEPSTVGKIRDALNFIRNQHFEVPFI 387
Query: 81 AMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSAL 140
A YRKE + E+N ++ LW I D+KW L+ RK +
Sbjct: 388 AFYRKEYV--------EPELNIND---------------LWRIWQWDEKWTQLRNRKRNM 424
Query: 141 QSYYKK----RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHF 195
++K +YE+ + D + L + L +T E+ D + F L++
Sbjct: 425 TRLFEKMQTFQYEQVAANDPDAPLPENMRPLTQTDLDKLNEVQTMEELRDAYMHFLLYY 483
>gi|328717138|ref|XP_003246129.1| PREDICTED: transcription elongation factor SPT6-like isoform 2
[Acyrthosiphon pisum]
gi|328717140|ref|XP_001950257.2| PREDICTED: transcription elongation factor SPT6-like isoform 1
[Acyrthosiphon pisum]
Length = 1814
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 366/1352 (27%), Positives = 620/1352 (45%), Gaps = 187/1352 (13%)
Query: 9 LRKALAGP-PTDGESIVDESTWIYNQ-LLSGTLPLFGQRGAGSPK-EGHDLSISRDDIMR 65
LR+ P P + + DE+ WIY Q T+ +G P+ + + I +
Sbjct: 299 LREVPVTPVPEGSDELDDEADWIYKQAFCKPTITTQENKGGIDPRLQSKKGPQTIGKIKK 358
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHD 125
LD + Q ++PF+A YRKE L ++N LW ++
Sbjct: 359 ALDFMRNQNFEVPFLAYYRKEYVEPEL------DIN-----------------ALWRVYH 395
Query: 126 LDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF---DSISKSLEAAETER 182
D KW L+ RK+ L +K + + +T + + D L A +T
Sbjct: 396 FDAKWCQLKSRKTMLIELLEKMRNYQMEMLMMDTNAPMPDHMRIIKDEDIDKLRAVQTNE 455
Query: 183 EVDDVDLKFNLHFPPGEVGVDEGQYKRPKR------------------------------ 212
E+ D+ F L++ + E K+ +
Sbjct: 456 ELKDIQGHFMLYYANDVPAMQENARKKSRELKRKARELREERRKLAIEAGEDVLDDDEDA 515
Query: 213 ------------------STKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
S Y+ C K+GL A +FG E + E++
Sbjct: 516 GNLDDDDSNVETVKPASSSGPYTMCLKSGLAGFAKRFGLKPEHFAANVRDNYQRHEVDQE 575
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
P ++A + + + VL+ ++M A ++S EP +RK +R F D A ++ PT
Sbjct: 576 SVDPYKLAGEYCNELLKTPDEVLKAGKYMVACQLSREPLIRKCLRETFFDRAKINIVPTK 635
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL--F 372
G ID H +K++R KP+R +L +Q AE++KLL ++ D L L
Sbjct: 636 RGVKEIDENHNCYSMKYIRRKPVRDLVRDDFLKLQMAEDDKLLTISFDEEVDGLGSLPYI 695
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ K+ Y+ D S + Q WND R + A L+P MVKE R + AK +L
Sbjct: 696 EEVKQLYIRDEFSSNVQQWNDVRRECVDLAYRKLLMPEMVKELRRSLLAEAKEHILKSCK 755
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAP--RVLACCWGPGKPETTFV-MLDSSGEVVDVLF 489
L N ++VGPY+ + ++ D + + RV+ + P + +F +L + GEVVD L
Sbjct: 756 HKLSNWLAVGPYKPEVDEDDDDWDTSKGIRVMGLAYSPDHEQASFACILSTDGEVVDHLR 815
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
+ R N + + D + F++ +PHV+V+GA + L DI ++ ++V
Sbjct: 816 LPYIMKRPFNDDIKAKRDGDFNHIRNFLIFKKPHVIVIGAESRDALWLVRDIKAVVDQLV 875
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
V + ++ + D L R++ NS ++ ++ +++LGR +Q+PL
Sbjct: 876 ------VDEQFPQIQVEILDNHLARIFANSIKGENEFRDYPQLLRESISLGRRMQDPLVE 929
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
+ LC EIL + + L +E + Q ++ TN+VG+DIN + R + L
Sbjct: 930 FSQLCSTDDEILCLRYHQYQEVLNQEELLEGLYQEFINRTNEVGVDINDVVQRVYAPNLL 989
Query: 670 QFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
QF+ GLGPRKA +L + + + + R VTA +G K+F+N GF+R+ + S+
Sbjct: 990 QFVCGLGPRKATALIKLMKQTNQRLENRTQLVTACHMGPKIFINCAGFIRIDTNSLGDST 1049
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTY 788
++++LD +R+HPE+Y A+++A + D D+E A+E + D P+ LK
Sbjct: 1050 EAYVEVLDGSRVHPETYEWARKMAVDALEYD------DEEANPAGALEEILDAPERLKDL 1103
Query: 789 LLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
LD +E +R+ NK TLY IR+EL H ++D R YK P+ + F +++ ET++T
Sbjct: 1104 DLDAFAEELERQGFGNKSITLYDIRQELNHRYKDIRVAYKPPNPAQVFELLTKETQETFF 1163
Query: 846 EGRVVQATV-----RRVQG-----------------QRAICV------------------ 865
G++V +TV R+ Q Q C
Sbjct: 1164 VGKMVLSTVTGIARRKPQNDQLDKANPVRNDETGLWQCPFCFKNDFLELSDVWNHFDAGG 1223
Query: 866 -----------LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
L++G++G + ++ S + + D++ + C+I I+ +R+
Sbjct: 1224 CPGQASGIRIRLDNGISGFIAMKNLS-NTHVANPEDRVRFNQAIHCRIIKIEPDRFSFEA 1282
Query: 915 VCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNV 974
+ S++++ DPYY E S+Q + E + + + A+ + K R+IVHPCF NV
Sbjct: 1283 TSKSSDLKDQENHWRPQKDPYYDHETESKQRKTELDKNKIKNAQTYIK-RVIVHPCFHNV 1341
Query: 975 TADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG 1034
+ EA+KLL+ + G++IIRPSS+G +LT+T KV D VY H DI E GK +
Sbjct: 1342 SFAEAVKLLNNSDQGDAIIRPSSKGADHLTVTWKVADNVYQHIDITEKGK-----VNAFS 1396
Query: 1035 IGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAE 1091
+G++L IG + FEDLDE++ R+I P+ S+ + +L +R +R G+ + +++LR E+
Sbjct: 1397 LGRSLWIGTEEFEDLDEIIARHITPMASNARELLRFRYYRDTDGGNIEKAEQILREERTN 1456
Query: 1092 FPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQR 1151
P++I Y +S ++ G F+L+ + + HEYI + P+G++FR + F+ I L +++
Sbjct: 1457 NPSKIHYIVSVSQKYAGKFLLSCLPTRRSKHEYITVTPEGYRFRSQNFDSIGSLFRWYKE 1516
Query: 1152 HIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGS--TNEGGWNRDRSS---TP 1206
H D+ P + VA+ SAG +G S T NR SS TP
Sbjct: 1517 HF----RDATPHVTPVASR-------------SAGQTYGPSPHTEPSPMNRSHSSHSATP 1559
Query: 1207 G-SRTGRNDYRNGGGRDGHPSGLPRPYGGRGR 1237
S++ Y N PS PY G+
Sbjct: 1560 QYSQSPHASYNN-----MQPSAYNTPYTPSGQ 1586
>gi|402899185|ref|XP_003912584.1| PREDICTED: transcription elongation factor SPT6 [Papio anubis]
Length = 1685
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 363/1243 (29%), Positives = 595/1243 (47%), Gaps = 148/1243 (11%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP----PG 198
++K + Y++ ++ L D I R +D D++ + P G
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI----------RALDTTDMERSTVKPWRICEG 461
Query: 199 EVGVDEGQ----YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
+ DE Q K+ R Y+ C AGL +A KFG + EQ G L E E
Sbjct: 462 DEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQF 521
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
P E+A ++ C+ F + +AVL+GAR+M A++I+ EP VR+ +R F + A ++ PT
Sbjct: 522 PAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTK 581
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL------ 368
G +D H K+L+ KP+++ D Q+L I AE+E LL I + +
Sbjct: 582 KGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAEDEGLLTTDISIDMKGVEGYGND 641
Query: 369 NKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLL 428
F + K+ Y D S Q WN QR + ++ AL FL M KE ++ + AK +++
Sbjct: 642 QTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVI 701
Query: 429 MEYGKALWNKVSVGPYQRKDNDITPDEE-------AAPRVLACCWGPGKPETTF-VMLDS 480
+ L+N + V PY R D + D++ RVL + + F +++
Sbjct: 702 KACSRKLYNWLRVAPY-RPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNG 760
Query: 481 SGEVVDVLFTGCLTLRSQNVRDQQSKKNDQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
GEV D L T R R+++ +K Q E L KF+++ +PHVV + N L
Sbjct: 761 EGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFLLNKKPHVVTVAGENRDAQMLI 820
Query: 539 DDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVA 598
+D+ I+ H D G ++ + + D L LY NS+ S + +++AV+
Sbjct: 821 EDVKRIV------HELDQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVS 874
Query: 599 LGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINL 658
L R +Q+PL A +C +IL K PL+ + +E + ++ N+VG+D+N
Sbjct: 875 LARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNR 934
Query: 659 AIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFL 717
AI + A +Q++ GLGPRK L + L + + +R VT +G KVF+N GFL
Sbjct: 935 AIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFL 994
Query: 718 RVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEH 777
++ + S+ +I++LD +R+HPE+Y A+++A + +E D + ++ A+E
Sbjct: 995 KIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEE 1050
Query: 778 VRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFY 834
+ + P+ LK LD +E +R+ +K TLY IR EL ++D R Y+ P+ +E F
Sbjct: 1051 ILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFN 1110
Query: 835 MISGETEDTLAEGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SD 881
M++ ET +T G+++ V RR QG+ +AI E+GL ++++ S+
Sbjct: 1111 MLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSE 1170
Query: 882 DWRDSE---------------------------LSDKLHE--------GDILTCKIKSIQ 906
W + LSDK+ + G + C+I I
Sbjct: 1171 VWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKID 1230
Query: 907 KNRYQVFLVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKER 964
++ L CR S++ RNN ++ + D YY + + +QE+ K K+ + K R
Sbjct: 1231 IEKFSADLTCRTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-R 1287
Query: 965 LIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGK 1024
+I HP F N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK
Sbjct: 1288 VIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGK 1347
Query: 1025 DHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEV 1081
++ +G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G + ++
Sbjct: 1348 ENA-----FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKL 1402
Query: 1082 DELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFED 1141
+ELL K E PT I Y E PG F+L Y P EY+ + P+GF++R ++F
Sbjct: 1403 EELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPT 1462
Query: 1142 IDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
++ L +F+ H DP PS S R+PA+ +T +
Sbjct: 1463 VNGLFRWFKDHYQDPVPGITPSSSSRT-----RTPASINATPA 1500
>gi|119571504|gb|EAW51119.1| suppressor of Ty 6 homolog (S. cerevisiae), isoform CRA_d [Homo
sapiens]
Length = 1679
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 361/1237 (29%), Positives = 594/1237 (48%), Gaps = 142/1237 (11%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQV 912
QG+ +AI E+GL ++++ ELS+ G + C+I I ++
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNF------PELSEV---GMTVHCRIMKIDIEKFSA 1230
Query: 913 FLVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPC 970
L CR S++ RNN ++ + D YY + + +QE+ K K+ + K R+I HP
Sbjct: 1231 DLTCRTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPS 1287
Query: 971 FQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIK 1030
F N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 1288 FHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA--- 1344
Query: 1031 SLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRI 1087
+G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL
Sbjct: 1345 --FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIK 1402
Query: 1088 EKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVA 1147
K E PT I Y E PG F+L Y P EY+ + P+GF++R ++F ++ L
Sbjct: 1403 TKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFR 1462
Query: 1148 YFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
+F+ H DP PS S R+PA+ +T +
Sbjct: 1463 WFKDHYQDPVPGITPSSSSRT-----RTPASINATPA 1494
>gi|326931374|ref|XP_003211806.1| PREDICTED: transcription elongation factor SPT6-like [Meleagris
gallopavo]
Length = 1725
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 363/1277 (28%), Positives = 601/1277 (47%), Gaps = 174/1277 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG S + I L+ + Q ++PFIA
Sbjct: 318 WIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEALNFMRNQHFEVPFIAF 377
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW++ D+KW L+ RK L
Sbjct: 378 YRKEYVEPEL------HIND-----------------LWSVWQWDEKWTQLKIRKQNLTR 414
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 415 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 469
Query: 195 F----PPGEVGVDEG-----------------------------QYKRPKRSTKYSSCSK 221
+ P + + K+ R Y+ C
Sbjct: 470 YGRDIPKMQNAAKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQT 529
Query: 222 AGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGAR 281
AGL +A KFG + EQ G L E E P E+A ++ C+ F S +AVL+GAR
Sbjct: 530 AGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGAR 589
Query: 282 HMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE 341
+M A++I+ EP VR+ +R F + A ++ PT G ID H K+L+ KP+++
Sbjct: 590 YMVALQIAREPLVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELR 649
Query: 342 DAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQR 395
D Q+L + AEEE LL + I + + F + K+ Y D S Q WN QR
Sbjct: 650 DDQFLKMSLAEEEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQR 709
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDE 455
+ ++ +L+ FL M KE ++ + AK ++L + L+N + V Y R D + D+
Sbjct: 710 TMAIERSLNQFLYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASY-RPDQQVEEDD 768
Query: 456 E-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
+ RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 769 DFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREK 828
Query: 508 NDQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 829 KAQDIETLKKFLLNKKPHVVTIAGENRDAQMLMEDVKRIV------HELDQGQQLSSIGV 882
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
D L LY NS+ S ++ +++AV+L R +Q+PL A +C +IL KL
Sbjct: 883 ELVDNELAILYMNSKKSENEFRDYPPLLRQAVSLARRIQDPLVEFAQVCSSDEDILCLKL 942
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
PL+ + ++ + ++ N+VG+D+N AI A LQ++ GLGPRK L +
Sbjct: 943 HPLQEHVVKEDLLNALYCEFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLK 1002
Query: 686 SLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
L + + R VT +G KVF+N GF+++ + S+ +I++LD +R+HPE+
Sbjct: 1003 ILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPET 1062
Query: 745 YGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---N 801
Y A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +
Sbjct: 1063 YEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGD 1118
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RR 856
K TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1119 KHITLYDIRAELSCRYKDLRTPYRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRR 1178
Query: 857 VQGQ-----------------------------------------RAICV---LESGLAG 872
QG+ +AI V L++G+AG
Sbjct: 1179 PQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAG 1238
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQ 930
+ + SD +++ G + C+I I ++ L CR S++ +NN ++ +
Sbjct: 1239 FIPTKFLSDKVVKRP-EERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPK 1297
Query: 931 NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGE 990
D YY + + +QE+ K K+ + K R+I HP F N++ +A K++ + G+
Sbjct: 1298 --DTYYDFDTEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNISFKQAEKMMETMDQGD 1354
Query: 991 SIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLD 1050
IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLD
Sbjct: 1355 VIIRPSSKGENHLTVTWKVNDGIYQHVDVREEGKENA-----FSLGSTLWINTEEFEDLD 1409
Query: 1051 EVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
E+V RY+ P+ S + +L+++ ++ G K +++ELL K E PT I Y + P
Sbjct: 1410 EIVARYVQPMASFARDLLNHKYYQDCNGGDKKKLEELLIKTKKEKPTFIPYFISACKDLP 1469
Query: 1108 GTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSV 1167
G F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1470 GKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPTVNGLFRWFKDHYQDPVPGITPSSSSR 1529
Query: 1168 AAMVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1530 T-----RTPASINATPA 1541
>gi|443699629|gb|ELT99006.1| hypothetical protein CAPTEDRAFT_160659 [Capitella teleta]
Length = 1594
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 371/1286 (28%), Positives = 620/1286 (48%), Gaps = 171/1286 (13%)
Query: 17 PTDGESIVDESTWIYNQLLSGTLPLFGQR-----GAGSPKEGHDLSISRDDIMRFLDLLH 71
PT+ + +ES WIY +L PL Q G S ++G +IS+ I L +
Sbjct: 179 PTEKGELKEESEWIY-KLAFSQPPLSHQENSEQDGNRSNRKGPG-TISK--IQEALKFMR 234
Query: 72 LQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWL 131
Q+ ++PFIA YRKE + DL N+ LW ++ D+KW+
Sbjct: 235 NQQFEVPFIAFYRKE---YVDPDLNIND--------------------LWRVYHWDEKWM 271
Query: 132 LLQKRKSALQSYYKKRYEEESRRIYDETRLALN-QQLFDSISKSLEAAETEREVDDVDLK 190
L+ RK L ++K E + ++ E L + + L D + + E+ DV
Sbjct: 272 QLKARKQNLIRLHEKMQEFQFEQVDPEKDLESHVRALTDEDIERARNVQNMDELRDVYQH 331
Query: 191 FNLHFPPG-------------------------------------EVGVDEGQYKRPKRS 213
F L++ P E VD K+ R
Sbjct: 332 FMLYYGPDIPKMKASLRAKKKRERDAERANRDGEGEGRGEGEEDKEQEVD--NLKQATRK 389
Query: 214 TKYSSCSKAGLWEVASKFGYSSEQLG--LQLSLEKMGDELEDPKETPEEMASNFKCAMFN 271
T Y C +AGL E+A K+G + EQ G LQ + ++ D +DP E P E+A + FN
Sbjct: 390 TGYILCVEAGLAELARKYGLTPEQFGENLQDNYQR-HDVDQDPAE-PLELAKEYVKKQFN 447
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW 331
S + VL+GA+HM +++I+ +P VRK VR F + A + PT G ID H K+
Sbjct: 448 SPEEVLKGAQHMVSMQIAHDPLVRKCVRETFYERAKTTLRPTKKGVKEIDESHPCYTFKY 507
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS---LNKLFSDCKEHYLSDGVSKSA 388
L+ KP+R + Q++ I +AE++ LL I + E L F + K+ Y+ D SK
Sbjct: 508 LKNKPIRDLHEEQFMRIHQAEQDGLLTYEIHIDERDNLRLQDYFDEIKQLYIKDEFSKHV 567
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
Q WNDQR ++ AL+ L P +VKE ++ + AK ++ + L+N + V PYQ D
Sbjct: 568 QEWNDQRCGAIERALNLILFPQLVKELKAKLLEEAKECIIKGACRRLYNCIKVAPYQ-SD 626
Query: 449 NDITPDEEAAP------RVLACCWGPGKPETTFVM-LDSSGEVVDVL-FTGCLTLRSQN- 499
+ DE+ RV+ + + E + +D GEV D + T L R
Sbjct: 627 QQLDNDEDEDDSDAHGLRVMGLAYSTDRSEAAYAACIDGDGEVSDFMRLTHILNRRGPRG 686
Query: 500 ---VRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV 556
++ K N+ ++L F+++ +PH + + A + + DD+ ++ + +E
Sbjct: 687 GGVTWQEKDKANELQKLKDFIINKRPHAIAISAESREALMIMDDLKALLSDLEQE----- 741
Query: 557 GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP 616
H+M + + + L R++ NS + ++ AV+L R LQ+PL + +C
Sbjct: 742 -HQMAPVGVELVENDLARVFANSTKGQNDFREYPVLLREAVSLARRLQDPLIEFSQMCNQ 800
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
+ILS K P+++ + +E + V+ N+VG+D+N + +QF+ GLG
Sbjct: 801 DEDILSMKFHPMQDVVAKEEILNALSLEFVNRVNEVGVDVNRCVAHPHTATLVQFVCGLG 860
Query: 677 PRKAASLQRSLVRAGA-IFTRKDFVT-AHG-LGKKVFVNAVGFLRVRRSGQAASSSQFID 733
PRK L ++L + + + R VT +H +G KVF+N GF+++ S S+ +++
Sbjct: 861 PRKGYHLLKTLKQNNSRLENRTQLVTMSHANMGPKVFINCAGFIKIDTSSLGDSTEAYVE 920
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDR 792
+LD +R+HPE+Y A+++A + D + EDA A+E + + P+ LK LD
Sbjct: 921 VLDGSRVHPETYEWARKMAVDALEYD-----DTAEDANPAGALEEILESPERLKDLDLDA 975
Query: 793 HIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
+E +R+ NK TLY IR EL H ++D R Y+ +Q+E F M++ E+ T G++
Sbjct: 976 FAEELERQGYGNKHITLYDIRAELNHRYKDLRTPYRSATQEERFNMLTKESPATFYIGKL 1035
Query: 850 VQATVRRVQGQRAICVL----------ESGL--AGMLMKEDYSD---------------- 881
+ V + +R L E+GL + K D+ D
Sbjct: 1036 IMCVVTGIAHKRPRSDLLDNADPVRNDETGLWQCPLCQKNDFPDLAEVWNHFDADACPGK 1095
Query: 882 ----------------------DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRES 919
D + D++ G L C+I I R+QV L + S
Sbjct: 1096 AVGVKTRLDNTVSGFIPLKNISDKHVNHPEDRVKVGMTLHCRISKIDIERFQVELTSKTS 1155
Query: 920 EMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEA 979
++ + ++ DPYY E ++++++K+ + A++ + +R+IVHP F N+ E
Sbjct: 1156 DLVDQDHKWRLQTDPYYDRETEESDKKKDESKKKLQ-ARQTYTKRVIVHPSFHNIDYKEC 1214
Query: 980 MKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTL 1039
K+++ + G+ +IRPSS+G +LT+T KV DGV +H D+ E GK++ +G L
Sbjct: 1215 EKVMANMDQGDVVIRPSSKGNDHLTVTWKVTDGVLSHVDVREEGKENA-----FSLGSQL 1269
Query: 1040 KIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRI 1096
IG + FEDLDE+V RYI P+ + + +L+Y+ +++ G + +D++ EK + PT+I
Sbjct: 1270 IIGNEEFEDLDEIVARYIQPMAAFARDILNYKYYKRAEGGMQEVLDKICLEEKRKAPTKI 1329
Query: 1097 VYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
Y F S + PG F L+Y+ T+ HE++ + P+G +FR ++F + LV +F+ H DP
Sbjct: 1330 PYYFSASKQLPGKFTLSYMPRTSTKHEFVTVTPEGLRFRSQIFPSLGALVRWFKEHFSDP 1389
Query: 1157 QGDSAPSIRSVAAMVPMRSPANGGST 1182
S PS S + M S +N ST
Sbjct: 1390 IPGSTPS--SSRTPMGMTSSSNPNST 1413
>gi|363741138|ref|XP_423183.3| PREDICTED: transcription elongation factor SPT6 [Gallus gallus]
Length = 1726
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 363/1277 (28%), Positives = 601/1277 (47%), Gaps = 174/1277 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG S + I L+ + Q ++PFIA
Sbjct: 318 WIYRNAFATPTISLQESSDYLDRGQTSSSFSRKGPSTIQKIKEALNFMRNQHFEVPFIAF 377
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW++ D+KW L+ RK L
Sbjct: 378 YRKEYVEPEL------HIND-----------------LWSVWQWDEKWTQLKIRKQNLTR 414
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 415 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 469
Query: 195 F----PPGEVGVDEG-----------------------------QYKRPKRSTKYSSCSK 221
+ P + + K+ R Y+ C
Sbjct: 470 YGRDIPKMQNAAKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQT 529
Query: 222 AGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGAR 281
AGL +A KFG + EQ G L E E P E+A ++ C+ F S +AVL+GAR
Sbjct: 530 AGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGAR 589
Query: 282 HMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE 341
+M A++I+ EP VR+ +R F + A ++ PT G ID H K+L+ KP+++
Sbjct: 590 YMVALQIAREPLVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELR 649
Query: 342 DAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQR 395
D Q+L + AEEE LL + I + + F + K+ Y D S Q WN QR
Sbjct: 650 DDQFLKMSLAEEEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQR 709
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDE 455
+ ++ +L+ FL M KE ++ + AK ++L + L+N + V Y R D + D+
Sbjct: 710 TMAIERSLNQFLYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASY-RPDQQVEEDD 768
Query: 456 E-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
+ RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 769 DFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREK 828
Query: 508 NDQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 829 KAQDIETLKKFLLNKKPHVVTIAGENRDAQMLMEDVKRIV------HELDQGQQLSSIGV 882
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
D L LY NS+ S ++ +++AV+L R +Q+PL A +C +IL KL
Sbjct: 883 ELVDNELAILYMNSKKSENEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKL 942
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
PL+ + ++ + ++ N+VG+D+N AI A LQ++ GLGPRK L +
Sbjct: 943 HPLQEHVVKEDLLNALYCEFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLK 1002
Query: 686 SLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
L + + R VT +G KVF+N GF+++ + S+ +I++LD +R+HPE+
Sbjct: 1003 ILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPET 1062
Query: 745 YGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---N 801
Y A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +
Sbjct: 1063 YEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGD 1118
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RR 856
K TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1119 KHITLYDIRAELSCRYKDLRTPYRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRR 1178
Query: 857 VQGQ-----------------------------------------RAICV---LESGLAG 872
QG+ +AI V L++G+AG
Sbjct: 1179 PQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAG 1238
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQ 930
+ + SD +++ G + C+I I ++ L CR S++ +NN ++ +
Sbjct: 1239 FIPTKFLSDKVVKRP-EERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPK 1297
Query: 931 NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGE 990
D YY + + +QE+ K K+ + K R+I HP F N++ +A K++ + G+
Sbjct: 1298 --DTYYDFDTEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNISFKQAEKMMETMDQGD 1354
Query: 991 SIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLD 1050
IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLD
Sbjct: 1355 VIIRPSSKGENHLTVTWKVNDGIYQHVDVREEGKENA-----FSLGSTLWINTEEFEDLD 1409
Query: 1051 EVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
E+V RY+ P+ S + +L+++ ++ G K +++ELL K E PT I Y + P
Sbjct: 1410 EIVARYVQPMASFARDLLNHKYYQDCNGGDKKKLEELLIKTKKEKPTFIPYFISACKDLP 1469
Query: 1108 GTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSV 1167
G F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1470 GKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPTVNGLFRWFKDHYQDPVPGITPSSSSR 1529
Query: 1168 AAMVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1530 T-----RTPASINATPA 1541
>gi|440803135|gb|ELR24047.1| S1 RNA binding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1378
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 349/1203 (29%), Positives = 589/1203 (48%), Gaps = 137/1203 (11%)
Query: 13 LAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHL 72
L PP + E + E+ WI++++ Q G H + ++R IM+ L+ +
Sbjct: 208 LELPPVEREILGREAEWIFSRVF--------QHRPGLDTHQHAM-VTR--IMQVLEFIRK 256
Query: 73 QKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
Q ++PFIA YRK D+ R P L LW I++ D+K++
Sbjct: 257 QNYEVPFIAHYRK---------------------DYWRCPQLSPAD-LWLIYEWDEKFIH 294
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+ +K+ L++ Y +A+ + + +E+ +T+++V D+ F
Sbjct: 295 ILTKKANLRAMY----------------MAIEGLEEEYYGELIESCDTDQDVKDLHDHFQ 338
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK-FGYSSEQLGLQLSLEKMGDEL 251
LH+ V +YKRP + Y+ C K GL E A+K FG +++Q G L +
Sbjct: 339 LHYHEAIEQVSTSRYKRPVKRDFYTVCKKTGLVEFANKSFGLTAKQFGDNLMDSVLTHTP 398
Query: 252 EDPKETPEEMASNFKCA----MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
+P+ PE +A+ F + F ++VL+ +R++ A EI+ +P VR +RS F D+
Sbjct: 399 ANPEPDPETLAAEFMNSPENREFVDVESVLKASRYVLAREIAYDPHVRTSLRSTFYDHVE 458
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED-AQWLLIQKAEEEKLLQVTIKLPED 366
VST PTP G ID H++ VK L +KP+ F+D AQ+L I KAE+E + TI +P +
Sbjct: 459 VSTFPTPKGRKEIDRLHEYFNVKRLEKKPIWAFKDSAQFLQIVKAEKEGYITATISIPNE 518
Query: 367 SLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSW 426
+ + ++ YLSDG S +AQ WN+QR L+LK+AL L P E R+ M+ A
Sbjct: 519 A--DFLQEMEQLYLSDGYSLNAQKWNEQRRLVLKEALTANLYPLFRTELRAKMTQEALDH 576
Query: 427 LLMEYGKALWNKVSVGPYQ-----------RKDNDITPDEEAAPRVLACCWGPGKPETTF 475
+L L ++ GP++ ++D +V+ C WG G+ T
Sbjct: 577 VLARSTANLRRELMRGPFKPISSSSRSDYYDDEDDRMERLVGNTKVMGCVWGQGEAPTIC 636
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVR---DQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
+++D G+ +++L + +RS D++ K+ + ++L F+ DH PH +V+GA
Sbjct: 637 IVVDRDGQPLELLKLNFINMRSDEHAPELDRRRKEQELDQLRDFISDHTPHAIVVGAGPN 696
Query: 533 SCTSLKDDIYEIIFKMVE--EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQK 590
S + +E + + E +D+ H + + Y D + ++Y+NS S + P
Sbjct: 697 EIDSRR--FFEELTRAATTVEARKDLRH---RIHVTYADSRIAKIYKNSSRSQKEFPDYA 751
Query: 591 GNVKRAVALGRYLQNPLAMVATLCGPG-REILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ AV L R+LQNPL L G E+L P + + + + + + +DV
Sbjct: 752 PLAREAVCLARFLQNPLIEYCGLTLDGAEEVLCLPFHPQQELVPKELLHQHLMRTFIDVV 811
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD--------FVT 701
N+VG+DIN A+ ++ PLQF +GLGPRKA +L ++L R G + + ++ F T
Sbjct: 812 NEVGVDINHAVQHKFAAGPLQFTAGLGPRKAQALLQALERKGGLVSSREEIDAALQTFST 871
Query: 702 AHG------LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
G V+ N GFLRV ID LDDTRIHP+ YG A+++A +
Sbjct: 872 PSGNPDDEDRMSVVYTNCAGFLRVCNKYFLRDHRDIIDPLDDTRIHPDDYGFARKMAADA 931
Query: 756 YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRE---TLYLIRRE 812
L+++ED +E + RP L+ L+ +E +R K + L IRRE
Sbjct: 932 --------LDEEEDEGSSQVEAIIRRPQKLEDIDLESFAEEWERSGKGKKAVALQDIRRE 983
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
L + D R+ Y++ + D+ FY+++GETE TL G++V A V RV C L++GL G
Sbjct: 984 LGDPYADPRDSYRDLTPDQLFYLLTGETETTLRAGQLVHAKVFRVSRDIVFCRLDNGLFG 1043
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRY-QHCQN 931
+ D +D S D + G L C++ S+ K ++ V L S++ + H
Sbjct: 1044 SIRLLDLTDSAVQSP-DDVVVPGQYLACRVLSVDKEKFSVALASSHSKLNDPTLGDHYGK 1102
Query: 932 LDPYYHEERSSRQSEQEK---------------ARKEKELAKKHFKERLIVHPCFQNVTA 976
LDPY E+ + Q+E + ++ + +R I HP F++ +
Sbjct: 1103 LDPYLL-EKEAEQTELPRDLAAIQRKKAAAAAAGGAQRRAPARKKPQRTITHPLFRSCSW 1161
Query: 977 DEAMKLLSAKEPGES--IIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG 1034
EA LL KEPG IIRPSS+G ++L ++ K+ D V H D++E
Sbjct: 1162 REAEDLLRDKEPGADAIIIRPSSQGSNHLNISWKLTDTVCIHTDVVERS----------- 1210
Query: 1035 IGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPT 1094
K ++ + +ED+DE++ R+I+P+ + M +YR +R + +++ LR ++ P
Sbjct: 1211 -SKKWEVEKQVYEDMDELIYRFIEPMTEFGREMQNYRLYRAEGRDSIEQRLRQDRETNPA 1269
Query: 1095 RIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHID 1154
RI Y S + F + Y P E + + +G+++R F++ ++L+AYF+ +
Sbjct: 1270 RIPYYVIPSPDQSRRFTIAYWHQ-KPRFESVAVTHEGYRYRGHHFKNPEKLIAYFKANFK 1328
Query: 1155 DPQ 1157
+P+
Sbjct: 1329 NPR 1331
>gi|449266001|gb|EMC77128.1| Transcription elongation factor SPT6 [Columba livia]
Length = 1726
Score = 481 bits (1239), Expect = e-132, Method: Compositional matrix adjust.
Identities = 363/1277 (28%), Positives = 600/1277 (46%), Gaps = 174/1277 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG S + I L+ + Q ++PFIA
Sbjct: 322 WIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEALNFMRNQHFEVPFIAF 381
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 382 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLKIRKQNLTR 418
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 419 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSTDELKDVYNHFLLY 473
Query: 195 F----PPGEVGVDEG-----------------------------QYKRPKRSTKYSSCSK 221
+ P + + K+ R Y+ C
Sbjct: 474 YGRDIPKMQNAAKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQT 533
Query: 222 AGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGAR 281
AGL +A KFG + EQ G L E E P E+A ++ C+ F S +AVL+GAR
Sbjct: 534 AGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGAR 593
Query: 282 HMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE 341
+M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++
Sbjct: 594 YMVALQIAREPLVRQVLRQTFQERAKINISPTKKGKKDVDEAHYAYSFKYLKNKPVKELR 653
Query: 342 DAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQR 395
D Q+L + AEEE LL + I + + F + K+ Y D S Q WN QR
Sbjct: 654 DDQFLKMSLAEEEGLLTIDISIDMKGVEGYGSDQTYFDEIKQFYYRDEFSHQVQEWNRQR 713
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDE 455
+ ++ +L+ FL M KE ++ + AK ++L + L+N + V Y R D + D+
Sbjct: 714 TMAIERSLNQFLYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASY-RPDQQVEEDD 772
Query: 456 E-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
+ RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 773 DFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREK 832
Query: 508 NDQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 833 KAQDIETLKKFLLNKKPHVVTIAGENRDAQMLMEDVKRIV------HELDQGQQLSSIGV 886
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
D L LY NS+ S ++ +++AV+L R +Q+PL A +C +IL KL
Sbjct: 887 ELVDNELAILYMNSKKSENEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKL 946
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
PL+ + +E + ++ N+VG+D+N AI A LQ++ GLGPRK L +
Sbjct: 947 HPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLK 1006
Query: 686 SLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
L + + R VT +G KVF+N GF+++ + S+ +I++LD +R+HPE+
Sbjct: 1007 ILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPET 1066
Query: 745 YGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---N 801
Y A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +
Sbjct: 1067 YEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGD 1122
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RR 856
K TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1123 KHITLYDIRAELSCRYKDLRTPYRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRR 1182
Query: 857 VQGQ-----------------------------------------RAICV---LESGLAG 872
QG+ +AI V L++G+AG
Sbjct: 1183 PQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAG 1242
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQ 930
+ + SD +++ G + C+I I ++ L CR S++ +NN ++ +
Sbjct: 1243 FIPTKFLSDKVVKRP-EERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPK 1301
Query: 931 NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGE 990
D YY + + +QE+ K K+ + K R+I HP F N++ +A K++ + G+
Sbjct: 1302 --DTYYDFDSEAADHKQEEDLKRKQQRTTYIK-RVIAHPSFHNISFKQAEKMMETMDQGD 1358
Query: 991 SIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLD 1050
IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLD
Sbjct: 1359 VIIRPSSKGENHLTVTWKVNDGIYQHVDVREEGKENA-----FSLGSTLWINTEEFEDLD 1413
Query: 1051 EVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
E+V RY+ P+ S + +L+++ ++ G K +++ELL K E PT I Y + P
Sbjct: 1414 EIVARYVQPMASFARDLLNHKYYQDCNGGDKKKLEELLIKTKKEKPTFIPYFISACKDLP 1473
Query: 1108 GTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSV 1167
G F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1474 GKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPTVNGLFRWFKDHYQDPVPGITPSSSSR 1533
Query: 1168 AAMVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1534 T-----RTPASINATPA 1545
>gi|344290516|ref|XP_003416984.1| PREDICTED: transcription elongation factor SPT6 [Loxodonta africana]
Length = 1726
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 365/1275 (28%), Positives = 601/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRIREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNIAPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AEEE LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEEEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|426237206|ref|XP_004012552.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor SPT6
[Ovis aries]
Length = 1717
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 372/1327 (28%), Positives = 616/1327 (46%), Gaps = 176/1327 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGDGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNISPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
L ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 LAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LIDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
LSDK+ + G + C+I I ++ L CR S++ + + D
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRSNEWKLPKDT 1299
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ IIR
Sbjct: 1300 YYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVIIR 1358
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVD 1054
PSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+V
Sbjct: 1359 PSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEIVA 1413
Query: 1055 RYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFI 1111
RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG F+
Sbjct: 1414 RYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFL 1473
Query: 1112 LTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMV 1171
L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1474 LGYQPRGKPRIEYVTVTPEGFRYRGQVFPTVNGLFRWFKDHYQDPVPGITPSSSSRT--- 1530
Query: 1172 PMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRTGR--NDYRNGGGRDGHPSGLP 1229
R+PA+ +T + + N R ++ P + T + N G+ +P+ P
Sbjct: 1531 --RTPASINATPA-------NINLADLTRAVNALPQNMTSQMFNAIAAVTGQGQNPNATP 1581
Query: 1230 RPYGGRG 1236
+ G G
Sbjct: 1582 AQWXGGG 1588
>gi|301753064|ref|XP_002912369.1| PREDICTED: transcription elongation factor SPT6-like [Ailuropoda
melanoleuca]
Length = 1726
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 361/1276 (28%), Positives = 598/1276 (46%), Gaps = 173/1276 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ-----------------------------------------RAICV---LESGLAGM 873
QG+ +AI V L++G+ G
Sbjct: 1180 QGESYDQAIRNDDTGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 874 LMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQN 931
+ + SD +++ G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRP-EERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK- 1297
Query: 932 LDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGES 991
D YY + + +QE+ K+K+ + K R+I HP F N+ +A K++ + G+
Sbjct: 1298 -DTYYDFDAEAADHKQEEDMKQKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDV 1355
Query: 992 IIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDE 1051
IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE
Sbjct: 1356 IIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDE 1410
Query: 1052 VVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG 1108
+V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1411 IVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPG 1470
Query: 1109 TFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVA 1168
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1471 KFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT 1530
Query: 1169 AMVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 -----RTPASINATPA 1541
>gi|350412618|ref|XP_003489706.1| PREDICTED: transcription elongation factor SPT6-like [Bombus
impatiens]
Length = 1767
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 361/1302 (27%), Positives = 620/1302 (47%), Gaps = 172/1302 (13%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLS----ISRDDI 63
LR P +G +D E+ WIY Q P + A E + + + I
Sbjct: 299 LRTVPVTPVAEGSDELDLEAEWIYKQAFCR--PTISIQDAHLNAEAKERARKGPQTIGKI 356
Query: 64 MRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAI 123
+ LD + Q+ ++PFI+ YRKE L L +N+ LW +
Sbjct: 357 KKALDFMRNQQFEVPFISFYRKEYVLPELN------IND-----------------LWKV 393
Query: 124 HDLDKKWLLLQKRKSALQSYYKK--RYEEESRRIYDETRLALNQQLF-DSISKSLEAAET 180
+ D KW L++RK L + K Y+ + + L N +L D + L+ +T
Sbjct: 394 YKFDAKWCQLRQRKENLLKLFDKMRNYQLDEIMKNPDAPLPDNVRLIKDDDIERLKNVQT 453
Query: 181 EREVDDVDLKFNLHFPPGEVGVDEGQYKRPK----------------------------- 211
E++DV F L++ + E ++ K
Sbjct: 454 SEELNDVYHHFMLYYSHEIPAMQEAARQKEKEARKEAKIQKRKQQIADAEENGEDPLPEE 513
Query: 212 ------------------RSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELED 253
R+ YS C +AGL +A KFG + E L E++
Sbjct: 514 EADVEEEEETDETLKQAVRTGPYSICRRAGLDNLAKKFGLTPEHFAENLRDNYQRHEVDQ 573
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
P +A+ + + +SS+ VL+ A+ M A++++ EP VRK VR ++M+ A +S PT
Sbjct: 574 EPTEPLTIANEYCSQILSSSEEVLKAAQLMVAIQLAREPLVRKCVREMYMERAKISVKPT 633
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKL 371
G ID H G+K+L++KP+R Q+L + AEE+KL+ +T+ + ++ N
Sbjct: 634 KKGIKEIDENHPVYGMKYLKDKPVRDLVGDQFLNLVIAEEDKLITITLSDSIEGNTSNNY 693
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
+ K+ Y D SK+ Q WN R ++ AL +LPS+ KE ++ + AK ++
Sbjct: 694 VDEMKQLYYRDEFSKNVQDWNALRVGSVEMALTRIVLPSLKKELKANLIAEAKECVMRAC 753
Query: 432 GKALWNKVSVGPYQRKDNDITP---DEEAAPRVLACCWGPGKPETTFV-MLDSSGEVVDV 487
G+ ++N + V PY + + D RV+ + P + F ++ GE D
Sbjct: 754 GRKMYNWIKVAPYTCEFPEEEDEEWDTSKGLRVMGLAYVPEYSQAAFTCLIAPDGECTDY 813
Query: 488 LFTGCLTLRSQNVRDQQS--KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
L + R + R+ + K+ D + F+ +PHVVV+G + + DI E I
Sbjct: 814 LRLPHIMKRKNSYREDEKTMKEADLLAIRNFIATKKPHVVVIGGESREAMMIAADIKECI 873
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
+VEE + + I D L ++Y NS + +++A++LGR +Q+
Sbjct: 874 ANLVEE------EQFPNIKIEICDNELAKIYSNSNKGVSEFRDYPELLRQAISLGRRMQD 927
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PL + LC EIL K L++ L DE + V+ N+VG+D+N A+ + +
Sbjct: 928 PLVEFSQLCTADEEILCLKYHNLQDQLPKDELLDNLYLEFVNRVNEVGVDVNKAVQQAYC 987
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
+QF+ GLGPRK +L + L + + R VT+ +G KVF+N GF+++ +
Sbjct: 988 GNLVQFVCGLGPRKGQALIKMLKQTNQRLENRTQLVTSCHMGPKVFINCAGFIKIDTNSL 1047
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPD 783
S+ ++++LD +R+HPE+Y A+++A ++ DDEDA A+E + + P+
Sbjct: 1048 GDSTEAYVEVLDGSRVHPETYEWARKMA-------VDALEYDDEDANPAGALEEILESPE 1100
Query: 784 LLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
LK LD +E +R+ NK TLY IR EL ++D R Y+ S + F +++ ET
Sbjct: 1101 RLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNCRYKDLRVPYQSLSAERLFDILTKET 1160
Query: 841 EDTLAEGRVVQATV-----RRVQG-----------------QRAICV------------- 865
+T G++V ATV R+ QG Q C+
Sbjct: 1161 PETFYVGKLVLATVIGISHRKPQGDQLDQANPVRNDETGLWQCPFCLKNDFPELSEVWNH 1220
Query: 866 ----------------LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNR 909
L++G++G + ++ S D + ++++ G I+ C+I I+ R
Sbjct: 1221 FDAGACPGKATGVRLRLDNGISGYIHIKNLS-DRHVANPEERVNIGQIIHCRIIKIEVER 1279
Query: 910 YQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSE-QEKARKEKELAKKHFKERLIVH 968
+ V + S++ + ++ DP+Y E R ++ +E A+K K+ ++ + +R+IVH
Sbjct: 1280 FSVECTSKSSDLADKNHEWRPQRDPFYDTEAEQRDAKVEEDAKKAKQ--RQTYVKRVIVH 1337
Query: 969 PCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKD 1028
P F N++ EA KL+ + GE+I+RPSS+G +LT+T KV D +Y H D+ E GK++
Sbjct: 1338 PSFHNISFAEAEKLMQTMKQGEAIVRPSSKGADHLTVTWKVTDEIYQHIDVREEGKENA- 1396
Query: 1029 IKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR---KGSKAEVDELL 1085
+G++L IG + FEDLDE++ R+++P+ ++ +L ++ ++ +G K + +E+L
Sbjct: 1397 ----FSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKPAVEGIKDKAEEIL 1452
Query: 1086 RIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRL 1145
+ +K E P I Y + +PG F+L+Y+ T HEY+ + P+GF+FR +MF + L
Sbjct: 1453 KEQKKENPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTVSPEGFRFRGQMFGRVSDL 1512
Query: 1146 VAYFQRHIDDP-QGDSAPSIRSVAAMVPMRSPANGGSTASAG 1186
+F+ H DP G S PS A + R+P + A +G
Sbjct: 1513 FRWFKEHFRDPVPGQSTPSTPRGA--MTSRTPYHTTPGAVSG 1552
>gi|281350545|gb|EFB26129.1| hypothetical protein PANDA_000112 [Ailuropoda melanoleuca]
Length = 1636
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 361/1276 (28%), Positives = 599/1276 (46%), Gaps = 173/1276 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 229 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 288
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 289 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 325
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 326 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 380
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 381 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 440
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 441 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 500
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 501 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 560
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 561 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 620
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 621 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 679
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK- 507
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 680 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 739
Query: 508 -NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
+D E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 740 ASDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 793
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 794 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 853
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 854 PLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 913
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 914 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 973
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 974 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1029
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1030 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1089
Query: 858 QGQ-----------------------------------------RAICV---LESGLAGM 873
QG+ +AI V L++G+ G
Sbjct: 1090 QGESYDQAIRNDDTGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1149
Query: 874 LMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQN 931
+ + SD +++ G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1150 IPTKFLSDKVVKRP-EERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK- 1207
Query: 932 LDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGES 991
D YY + + +QE+ K+K+ + K R+I HP F N+ +A K++ + G+
Sbjct: 1208 -DTYYDFDAEAADHKQEEDMKQKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDV 1265
Query: 992 IIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDE 1051
IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE
Sbjct: 1266 IIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDE 1320
Query: 1052 VVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG 1108
+V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1321 IVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPG 1380
Query: 1109 TFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVA 1168
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1381 KFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT 1440
Query: 1169 AMVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1441 -----RTPASINATPA 1451
>gi|198432223|ref|XP_002124701.1| PREDICTED: similar to Suppressor of Ty 6 homolog (S. cerevisiae)
[Ciona intestinalis]
Length = 1609
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 346/1216 (28%), Positives = 589/1216 (48%), Gaps = 145/1216 (11%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I L+ + Q+ + PFI+ YRKE P L H L+
Sbjct: 300 IQDTLNFMRNQQYEAPFISFYRKEYV----------------------EPELNIHD-LFK 336
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALN---QQLFDSISKSLEAAE 179
I+ D+KW + RK+++ +K + +I + L + L D+ + L+ +
Sbjct: 337 IYHWDEKWTQMNVRKASVTRLMQKMQTFQYEQISADPDKPLGDNVRALTDADIERLQGIQ 396
Query: 180 TEREVDDVDLKFNLHF-------------------------PPGEVGVDEGQYKRPKRST 214
T E D+ F LH+ P + K+ R
Sbjct: 397 TMEEYHDIYRHFLLHYGRDVPKMQNALRIQRQRERAENGLNPDEDAPSLASDLKQASRRH 456
Query: 215 KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQ 274
Y+ C AG+ VA+KFG + EQ G L E E P ++A +F C F++ +
Sbjct: 457 MYTVCLDAGIGGVANKFGLTPEQFGENLRDNYQRHETEQYPAEPMDLAEDFLCPQFSTKE 516
Query: 275 AVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLRE 334
AVL+GAR+M A++++ EP VR+ VR F + A +S PT G ID H KWL+
Sbjct: 517 AVLEGARYMVAMQLAREPLVRQCVRQTFNERAKISVQPTKKGKKEIDEGHPCFSYKWLQN 576
Query: 335 KPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL---NKLFSDCKEHYLSDGVSKSAQLW 391
KP++ Q+L I+ AE E L+ +TI + F + K+ Y D S Q W
Sbjct: 577 KPVKDLSGPQFLHIKNAETENLVTMTIHIDMHGTVGSQTYFEEIKQLYYRDEFSHLVQEW 636
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
N+QR +++ L N + P M KE ++L+ AK+ + L + +SV PYQ ++ +
Sbjct: 637 NNQRSKVVEFMLQNIIYPEMTKELKTLLYDEAKNGIKEHCALKLRSYLSVAPYQLEEREY 696
Query: 452 TPDEEAAPR---VLACCWGPGKPETTFVMLDSS-GEVVDVLFTGCLTLRSQNVRDQQS-- 505
DEE + V+A + + F + S GEVVD L + R ++ ++++
Sbjct: 697 DEDEEEERKGTVVMAIAYSEERDSAMFAAVVSGLGEVVDFLKLPNMRFRRKSHIEEEAKR 756
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
KK+D ++L KFM +PHVVV+GA + T++++D+ + + + +E + +++
Sbjct: 757 KKSDMDQLKKFMSKRKPHVVVIGAEDRLATTIQEDVQQCVTDLEQE------GVISNVAV 810
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
D L +Y +++ + +++A++L R LQ+P+ + LC ++++ KL
Sbjct: 811 ELMDNELSSVYASTQRAQADFRDFPVELRQAISLARRLQDPMLEFSQLCTADQDLMCLKL 870
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
PL++ L DE + + V +VG+D+N AI +QF+ GLGPRKAA L +
Sbjct: 871 HPLQDQLNKDELLEALVEEFVFRACEVGVDVNRAITHPHTATVVQFVCGLGPRKAAHLLK 930
Query: 686 SL-VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRV-RRSGQAASSSQFIDLLDDTRIHPE 743
L + G + R + VT +G K+F+N GF+++ +S S+ +I++LD R+HPE
Sbjct: 931 VLKQKNGRLENRSNLVTVCKMGPKIFINCAGFIKIDTKSIMEDSTDAYIEILDGLRVHPE 990
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE--- 800
+Y A+++A + +E D + ++ A+ + + P+ LK LD +E +R+
Sbjct: 991 TYEWARKMAVDA----LEYDESAEDANPSSALVEILESPERLKDLDLDAFAEELERQGYG 1046
Query: 801 NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----R 855
NK TLY IR EL ++D+R Y+ + +E+F M++ ET EG+++ V R
Sbjct: 1047 NKGITLYDIRNELNSQYKDFRTPYRSSTAEEKFEMVTKETLSNFKEGKMITCRVTGIAHR 1106
Query: 856 RVQGQ-------------------------------------------RAICV---LESG 869
R + + RA+ V LE G
Sbjct: 1107 RPKSEQLDQAEPHKDEETGMWNCSFCKTGGFAELSEVWAHLDNGECLGRAVGVKVRLEGG 1166
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
+ G + + SD S +++H G + C+I I R+QV L CR S++R++
Sbjct: 1167 ITGFIPTDKLSDKPV-SNPEERVHIGMTIHCRITKIDIERFQVDLTCRGSDLRDDAGSWK 1225
Query: 930 QNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPG 989
Q LD YY E+ + ++ + +K + K R+I HP F N+ A K + + G
Sbjct: 1226 QQLDTYYGFEQETLDKKKLEDSNKKSNRTTYIK-RVIAHPSFHNIDFKSAEKRMQDMDQG 1284
Query: 990 ESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDL 1049
++IIRPSS+G +LT T KV +GV+AH DI E K++ +G++L IG + FEDL
Sbjct: 1285 DAIIRPSSKGSDHLTATWKVSEGVFAHIDIREEKKENA-----FSLGRSLWIGNEEFEDL 1339
Query: 1050 DEVVDRYIDPLVSHLKAMLSYRKFRK--GSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
DE++ R+I P+ ++ + ++ ++ FR+ G K V++LL+ K P RI Y S P
Sbjct: 1340 DEIIARFIQPMAANARDLIGHKNFREVGGKKELVEDLLKQAKKSAPFRIPYFISASKSLP 1399
Query: 1108 GTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSV 1167
G F+L+Y+ HEY+ + P G+++R + F ++++ +F+ H DP +
Sbjct: 1400 GKFLLSYMPRARSKHEYVSINPDGYRYRSQNFTSLNQVFKWFKEHFRDP----------I 1449
Query: 1168 AAMVPMRSPANGGSTA 1183
+ R+PA G S +
Sbjct: 1450 PTHLMNRTPAGGNSVS 1465
>gi|395536136|ref|XP_003770076.1| PREDICTED: transcription elongation factor SPT6 [Sarcophilus
harrisii]
Length = 1726
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 602/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + I L + Q ++PFIA
Sbjct: 318 WIYRNAFATPTISLQESSDYLDRGQPVSSFNRKGPSTIQKIKEALGFIRNQHFEVPFIAF 377
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 378 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLKIRKENLTR 414
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 415 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 469
Query: 195 F---PPGEVGVDEGQYKRPKRSTK-----------------------------YSSCSKA 222
+ P + K+ KR+ + Y+ C A
Sbjct: 470 YGRDIPKMQNAAKASRKKLKRTREDGDEEEGEGEEVEDEQKGPELKQASRRDMYTICQSA 529
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 530 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 589
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A V+ PT G +D H K+L+ KP+++ D
Sbjct: 590 MVALQIAREPLVRQVLRQTFQERAKVNITPTKKGKKDVDEAHYAYSFKYLKNKPVKELRD 649
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L AEEE LL + I + + F + K+ Y D S Q WN QR
Sbjct: 650 DQFLKTCLAEEEGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 709
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 710 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLKVAPY-RPDQQVEEDDD 768
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 769 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 828
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N + +D+ I+ H D G ++ + +
Sbjct: 829 AQDIETLKKFLLNKKPHVVTIAGENRDAQMMIEDVKRIV------HELDQGQQLSSIGVE 882
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 883 MVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSTDEDILCLKFH 942
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 943 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1002
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1003 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1062
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1063 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1118
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1119 HITLYDIRAELSCRYKDLRTAYRSPNTEEVFNMLTKETPETFYIGKLIICNVTGIAHRRP 1178
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1179 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1238
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ +NN ++ +
Sbjct: 1239 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPK-- 1296
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1297 DTYYDFDAEAADHKQEEDAKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1355
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1356 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1410
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ +++ G + +++ELL K E PT I Y E PG
Sbjct: 1411 VARYVQPMASFARDLLNHKYYQECGGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1470
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1471 FLLGYQPRGKPRIEYVSVTPEGFRYRGQVFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1529
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1530 ----RTPASINATPA 1540
>gi|397483072|ref|XP_003812729.1| PREDICTED: transcription elongation factor SPT6 [Pan paniscus]
gi|410255562|gb|JAA15748.1| suppressor of Ty 6 homolog [Pan troglodytes]
gi|410300578|gb|JAA28889.1| suppressor of Ty 6 homolog [Pan troglodytes]
gi|410333201|gb|JAA35547.1| suppressor of Ty 6 homolog [Pan troglodytes]
Length = 1726
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 601/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|426348885|ref|XP_004042052.1| PREDICTED: transcription elongation factor SPT6 isoform 1 [Gorilla
gorilla gorilla]
gi|426348887|ref|XP_004042053.1| PREDICTED: transcription elongation factor SPT6 isoform 2 [Gorilla
gorilla gorilla]
Length = 1726
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 601/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|296202184|ref|XP_002748289.1| PREDICTED: transcription elongation factor SPT6 [Callithrix jacchus]
Length = 1726
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 601/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|410980337|ref|XP_003996534.1| PREDICTED: transcription elongation factor SPT6 [Felis catus]
Length = 1726
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 601/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|242006682|ref|XP_002424176.1| transcription elongation factor SPT6, putative [Pediculus humanus
corporis]
gi|212507517|gb|EEB11438.1| transcription elongation factor SPT6, putative [Pediculus humanus
corporis]
Length = 1783
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 312/1043 (29%), Positives = 529/1043 (50%), Gaps = 92/1043 (8%)
Query: 208 KRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC 267
K+ RS Y+ C KAGL ++ KFG + Q G L E++ P ++A +
Sbjct: 522 KQAVRSGPYAMCRKAGLTGLSKKFGLTPAQFGENLRDNYQRHEVDQESTEPLQLAKQYIS 581
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFA 327
F + +L+ + M A +++ EP VRK VR F + A + PT G ID H
Sbjct: 582 RQFMQPEDILKAVKFMVATQLAREPLVRKCVRETFFEKAKIDVKPTRKGIKEIDENHACY 641
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSDGVS 385
+K+L+ KP+R+ + Q++ + AEE+KLL +T ++P + + K+ Y D S
Sbjct: 642 SMKYLKGKPVRELQGDQFIKLAMAEEDKLLTITFDERIPGLTSLSYIEEVKQLYYRDEFS 701
Query: 386 KSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ 445
K+ Q WN R ++ AL LLP + KE ++ + A+ ++L + L+N + + PY
Sbjct: 702 KNVQDWNALRVECVEIALKKILLPDLKKELKAHLLSEAREYILKLCTRKLYNWIKIAPYT 761
Query: 446 RK--DNDITPDEEAAPRVLACCWGPGKPETTFV-MLDSSGEVVDVLFTGCLTLR--SQNV 500
+ +D D RV+ + P + F ++ GE D L L R S N
Sbjct: 762 SEFDHDDEDWDTSKGLRVMGVAYVPDLSQAAFACVVGPDGECTDYLRLPHLLKRKLSANK 821
Query: 501 RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
D K++D L + +PHV+V+G + +K DI +++ +VE+ E
Sbjct: 822 EDNIKKEHDLTSLKNLIQSKKPHVIVIGGESRDAIMIKTDIQQLVTSLVED------DEF 875
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
+++ D L + Y NS ++ +++A++L R +Q+PL + LC EI
Sbjct: 876 ASIAVEILDNELAKTYANSIKGENEFRDYPLLLRQAISLARRMQDPLTEFSQLCTSDEEI 935
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
L + PL++ + +E + ++ TN+VG+D+N A+ + + +QFI G GPRKA
Sbjct: 936 LCLRYHPLQDQVPKEELLEALYIEFINRTNEVGVDVNRAVAQAYTSNLVQFICGFGPRKA 995
Query: 681 ASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
A+L ++L + + R VTA +G KVF+N GF+++ + S+ ++++LD +R
Sbjct: 996 AALLKTLKQNNQRLENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSR 1055
Query: 740 IHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR 799
+HPE+Y A+++A + D D+E A+E + + P+ LK LD +E +R
Sbjct: 1056 VHPETYEWARKMAVDALEYD------DEEANPAGALEEILESPERLKDLDLDAFAEELER 1109
Query: 800 E---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG-----RVVQ 851
+ NK TLY IR EL H + D R Y P+ +E F M++ E+ +T G RVV
Sbjct: 1110 QGFGNKSITLYDIRAELNHRYNDLRTPYWSPNSEELFDMLTKESPETFYIGKMVLARVVG 1169
Query: 852 ATVRRVQG-----------------QRAICV----------------------------- 865
T +R +G Q C+
Sbjct: 1170 ITHKRPKGDQLDQANPVRNDETNLWQCPFCLKNDFPELSEVWNHFDAGSCPGQATGVRLR 1229
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
L++G+ G + + SD S +++ + ++ C+I I+ +R+ V + S++ +
Sbjct: 1230 LDNGINGYIHVRNLSDK-HVSNPEERVQQNQMIHCRITKIEVDRFSVECTSKSSDLADKN 1288
Query: 926 YQHCQNLDPYY-HEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLS 984
++ DPY+ H+ + +E +K K A++ + +R+IVHP F N+ E+ K++S
Sbjct: 1289 HEWRPPKDPYFDHDAETKDIKAEEDVKKLK--ARQQYIKRVIVHPAFHNIGYAESEKIMS 1346
Query: 985 AKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED 1044
E GE+IIRPSS+G ++LT+T KV DG+ H D+ E GK++ +G++L IG +
Sbjct: 1347 TLEQGEAIIRPSSKGANHLTVTWKVTDGILQHIDVREEGKENA-----FSLGQSLWIGNE 1401
Query: 1045 TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFG 1101
FEDLDE++ RYI+P+ SH + +LS++ +R G K + +ELLR EK + P +I Y
Sbjct: 1402 EFEDLDEIIARYINPMASHARDILSFKNYRDTEGGRKEKAEELLREEKKKNPNKIHYILS 1461
Query: 1102 ISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSA 1161
S PG FIL+Y+ HEY+ + P+GF+FR++MF ++ L+ +F+ H DP +
Sbjct: 1462 ASKSLPGKFILSYLPRNRCRHEYVSVTPEGFRFRQQMFYSVNLLLKWFKEHFRDPIPGTP 1521
Query: 1162 PSIRSVAAMVPMRSPANGGSTAS 1184
+ R R+P +GG T S
Sbjct: 1522 GTPRVT------RTPFHGGQTPS 1538
Score = 46.6 bits (109), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Query: 13 LAGPPTDGESIVDESTWIYNQ-LLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLH 71
+ P E + +E+ WIY Q T+ + P+ G +I + I R LD +
Sbjct: 298 VTAVPEGSEELDEEAEWIYKQAFCKPTISIQEVSDRDRPRRGPQ-TIGK--IKRALDFIR 354
Query: 72 LQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWL 131
Q ++PFIA YRKE L +N+ LW ++ D+KW
Sbjct: 355 NQNFEVPFIAFYRKEYVFPELN------IND-----------------LWKVYKYDEKWC 391
Query: 132 LLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAETEREVDDVD 188
L+ RK+ L +++ + + + + + D + L+ +T E+ DV
Sbjct: 392 QLKTRKNNLIKLFERMRDFLCEILTQNIDAPIPEDVRIISDDDIERLKNVKTMEELKDVH 451
Query: 189 LKFNLHF 195
+ F L++
Sbjct: 452 MNFLLYY 458
>gi|300797661|ref|NP_001180055.1| transcription elongation factor SPT6 [Bos taurus]
gi|296476939|tpg|DAA19054.1| TPA: suppressor of Ty 6 homolog [Bos taurus]
Length = 1726
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 372/1322 (28%), Positives = 617/1322 (46%), Gaps = 180/1322 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGDGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNISPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LIDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRTGR--NDYRNGGGRDGHPSG 1227
R+PA+ +T + + N R ++ P + T + N G+ +P+
Sbjct: 1531 ----RTPASINATPA-------NINLADLTRAVNALPQNMTSQMFNAIAAVTGQGQNPNA 1579
Query: 1228 LP 1229
P
Sbjct: 1580 TP 1581
>gi|126313909|ref|XP_001368732.1| PREDICTED: transcription elongation factor SPT6 [Monodelphis
domestica]
Length = 1726
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 355/1235 (28%), Positives = 588/1235 (47%), Gaps = 165/1235 (13%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I L + Q ++PFIA YRKE L +N+ LW
Sbjct: 358 IKEALGFIRNQHFEVPFIAFYRKEYVEPEL------HIND-----------------LWR 394
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
+ D+KW L+ RK L ++K + Y++ ++ L D I ++L+ + ER
Sbjct: 395 VWQWDEKWTQLKIRKENLTRLFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMER 449
Query: 183 --------EVDDVDLKFNLHF----PPGEVGVDEG------------------------- 205
E+ DV F L++ P +
Sbjct: 450 LKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKLKRIREDGDEEEGEGEEVEDEQ 509
Query: 206 ---QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMA 262
+ K+ R Y+ C AGL +A KFG + EQ G L E E P E+A
Sbjct: 510 KGPELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELA 569
Query: 263 SNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDS 322
++ C+ F + +AVL+GAR+M A++I+ EP VR+ +R F + A V+ PT G +D
Sbjct: 570 KDYVCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKVNITPTKKGKKDVDE 629
Query: 323 FHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCK 376
H K+L+ KP+++ D Q+L AEEE LL + I + + F + K
Sbjct: 630 AHYAYSFKYLKNKPVKELRDDQFLKTCLAEEEGLLTIDISIDMKGVEGYGSDQTYFEEIK 689
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
+ Y D S Q WN QR + ++ AL FL M KE ++ + AK +++ + L+
Sbjct: 690 QFYYRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEFVIKACSRKLY 749
Query: 437 NKVSVGPYQRKDNDITPDEE-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVL 488
N + V PY R D + D++ RVL + + F +++ GEV D L
Sbjct: 750 NWLKVAPY-RPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGDGEVTDFL 808
Query: 489 FTGCLTLRSQNVRDQQSKKNDQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
T R R+++ +K Q E L KF+++ +PHVV + N + +D+ I+
Sbjct: 809 RLPHFTKRRTAWREEEREKKAQDIETLKKFLLNKKPHVVTIAGENRDAQMMIEDVKRIV- 867
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
H D G ++ + + D L LY NS+ S + +++AV+L R +Q+P
Sbjct: 868 -----HELDQGQQLSSIGVEMVDNELAVLYMNSKKSEAEFRDYPPVLRQAVSLARRIQDP 922
Query: 607 LAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
L A +C +IL K PL+ + +E + ++ N+VG+D+N AI +
Sbjct: 923 LIEFAQVCSTDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQ 982
Query: 667 APLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
A +Q++ GLGPRK L + L + + +R VT +G KVF+N GFL++ +
Sbjct: 983 ALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLG 1042
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLL 785
S+ +I++LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ L
Sbjct: 1043 DSTDSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERL 1098
Query: 786 KTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETED 842
K LD +E +R+ +K TLY IR EL ++D R Y+ P+ +E F M++ ET +
Sbjct: 1099 KDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEVFNMLTKETPE 1158
Query: 843 TLAEGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE-- 887
T G+++ V RR QG+ +AI E+GL ++++ S+ W +
Sbjct: 1159 TFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSG 1218
Query: 888 -------------------------LSDKLHE--------GDILTCKIKSIQKNRYQVFL 914
LSDK+ + G + C+I I ++ L
Sbjct: 1219 SCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADL 1278
Query: 915 VCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQ 972
CR S++ +NN ++ + D YY + + +QE+ K K+ + K R+I HP F
Sbjct: 1279 TCRTSDLMDKNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFH 1335
Query: 973 NVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSL 1032
N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 1336 NINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA----- 1390
Query: 1033 VGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEK 1089
+G TL I + FEDLDE+V RY+ P+ S + +L+++ +++ G + +++ELL K
Sbjct: 1391 FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQECGGGDRKKLEELLIKTK 1450
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1149
E PT I Y E PG F+L Y P EY+ + P+GF++R ++F ++ L +F
Sbjct: 1451 KEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVSVTPEGFRYRGQVFPTVNGLFRWF 1510
Query: 1150 QRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
+ H DP PS S R+PA+ +T +
Sbjct: 1511 KDHYQDPVPGITPSSSSRT-----RTPASINATPA 1540
>gi|73966996|ref|XP_537747.2| PREDICTED: transcription elongation factor SPT6 isoform 1 [Canis
lupus familiaris]
Length = 1726
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 601/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSVGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|149724106|ref|XP_001504206.1| PREDICTED: transcription elongation factor SPT6 [Equus caballus]
Length = 1726
Score = 478 bits (1230), Expect = e-131, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 601/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSTFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLIIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|355568359|gb|EHH24640.1| Transcription elongation factor SPT6 [Macaca mulatta]
gi|355753863|gb|EHH57828.1| Transcription elongation factor SPT6 [Macaca fascicularis]
gi|380784745|gb|AFE64248.1| transcription elongation factor SPT6 [Macaca mulatta]
gi|383410555|gb|AFH28491.1| transcription elongation factor SPT6 [Macaca mulatta]
gi|384939620|gb|AFI33415.1| transcription elongation factor SPT6 [Macaca mulatta]
Length = 1726
Score = 478 bits (1230), Expect = e-131, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 600/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTTDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|40788888|dbj|BAA11479.2| KIAA0162 [Homo sapiens]
Length = 1730
Score = 478 bits (1230), Expect = e-131, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 600/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 323 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 382
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 383 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 419
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 420 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 474
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 475 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 534
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 535 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 594
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 595 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 654
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL I + + F + K+ Y D S Q WN QR
Sbjct: 655 DQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 714
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 715 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 773
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 774 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 833
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 834 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 887
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 888 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 947
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 948 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1007
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1008 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1067
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1068 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1123
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1124 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1183
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1184 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1243
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1244 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1301
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1302 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1360
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1361 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1415
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1416 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1475
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1476 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1534
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1535 ----RTPASINATPA 1545
>gi|417406701|gb|JAA49995.1| Putative transcription elongation factor spt6 [Desmodus rotundus]
Length = 1724
Score = 478 bits (1230), Expect = e-131, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 601/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 317 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 376
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 377 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 413
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 414 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYSHFLLY 468
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 469 YGRDIPKMQNAAKANRKKMKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 528
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 529 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 588
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 589 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 648
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L + AEEE LL + I + + F + K+ Y D S Q WN QR
Sbjct: 649 DQFLKMCLAEEEGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 708
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 709 MAIERALQQFLYVQMAKELKNKLLVEAKEYVIKACSRKLYNWLKVAPY-RPDQQVEEDDD 767
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 768 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 827
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 828 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 881
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 882 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 941
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 942 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1001
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1002 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1061
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1062 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1117
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1118 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1177
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1178 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1237
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1238 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1295
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1296 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1354
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1355 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1409
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1410 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1469
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1470 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1528
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1529 ----RTPASINATPA 1539
>gi|27597090|ref|NP_003161.2| transcription elongation factor SPT6 [Homo sapiens]
gi|51701986|sp|Q7KZ85.2|SPT6H_HUMAN RecName: Full=Transcription elongation factor SPT6; Short=hSPT6;
AltName: Full=Tat-cotransactivator 2 protein;
Short=Tat-CT2 protein
gi|119571502|gb|EAW51117.1| suppressor of Ty 6 homolog (S. cerevisiae), isoform CRA_b [Homo
sapiens]
gi|152013052|gb|AAI50269.1| Suppressor of Ty 6 homolog (S. cerevisiae) [Homo sapiens]
gi|187950373|gb|AAI36525.1| Suppressor of Ty 6 homolog (S. cerevisiae) [Homo sapiens]
gi|187951489|gb|AAI36523.1| Suppressor of Ty 6 homolog (S. cerevisiae) [Homo sapiens]
gi|224487751|dbj|BAH24110.1| suppressor of Ty 6 homolog [synthetic construct]
Length = 1726
Score = 478 bits (1230), Expect = e-131, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 600/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|348567973|ref|XP_003469773.1| PREDICTED: transcription elongation factor SPT6-like [Cavia
porcellus]
Length = 1726
Score = 478 bits (1229), Expect = e-131, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 601/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L + AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKMGLAEDEGLLVIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKDYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +DI I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDIKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNSLYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|270011547|gb|EFA07995.1| hypothetical protein TcasGA2_TC005584 [Tribolium castaneum]
Length = 1799
Score = 478 bits (1229), Expect = e-131, Method: Compositional matrix adjust.
Identities = 357/1279 (27%), Positives = 599/1279 (46%), Gaps = 164/1279 (12%)
Query: 17 PTDGESIVDESTWIYNQ-LLSGTLPLFGQRGAGSPKEGHD---LSISRDDIMRFLDLLHL 72
P D + ES WIY Q T+ +E +I + I + LD +
Sbjct: 299 PEDSTELDVESEWIYKQAFCKATVSNMDANLTMEARERQKKGPQTIGK--IRKALDFMRN 356
Query: 73 QKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
Q+L++PFIA YRKE Q E+N ++ LW ++ D KW
Sbjct: 357 QQLEVPFIAFYRKEYV--------QPELNIND---------------LWKVYKYDAKWCQ 393
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAETEREVDDVDL 189
L+ RK L + ++K + +I + + + + DS + L + +T E+ DV
Sbjct: 394 LKSRKENLLALFEKMRSYQLDQIMKDPDAPIPENVRLIRDSDIERLNSVQTAEELQDVHN 453
Query: 190 KFNLH-------------------------------FPPGEVGVD--------------E 204
F L+ E G +
Sbjct: 454 HFVLYYAQDLPAMHAAWRAKEKERKKQEKRAARLKLIAESEEGAEIPEDMDDDQEDEPEP 513
Query: 205 GQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASN 264
K RS Y+ C+KAGL +A KFG + E L E+E P+E+A
Sbjct: 514 ETLKYANRSGSYALCTKAGLDALAKKFGLTPEHFAENLRDNYQRHEVEQEAVEPQEVAKQ 573
Query: 265 FKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFH 324
F C F S VLQ A++M A++I+ EP VRK VR +F + A ++ PT G ID H
Sbjct: 574 FVCTQFPSVDEVLQAAKYMVALQIAREPLVRKCVREVFFERAKMTVRPTKKGMKVIDETH 633
Query: 325 QFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSD 382
+K++++KP+R Q+L + AEEE LL +TI + ++ + K+ Y+ D
Sbjct: 634 NCYSMKYIKDKPVRDLTGDQFLKLTLAEEENLLTITINENIEGNTSGSYIDEVKQLYIRD 693
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
SK+ Q WN R ++ AL +LP + E + + AK +L + L+N + +
Sbjct: 694 EFSKNVQDWNALRMGCVERALTRCVLPDLRGELKRTLLAEAKESVLKACCRKLYNWIKIA 753
Query: 443 PYQRKDNDITPDE---EAAPRVLACCWGPGKPETTFVMLDS-SGEVVDVLFTGCLTLRSQ 498
PY D DE RV+ + P ++ F + + GE+ D L + R
Sbjct: 754 PYSVSFPDEDEDEWDTSKGIRVMGLAYVPDYSQSAFACIAAPDGEITDYLRLPHILKRKN 813
Query: 499 NVRDQQS--KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV 556
+ + + K++D L F+ +PHV+ +G + + DD+ II +VE
Sbjct: 814 SFKPDEKLMKESDLVTLRNFINMKKPHVIAIGGESREALMIADDLKAIITDLVE------ 867
Query: 557 GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP 616
+ ++ + D L ++Y S +++AV+L R +Q+PL + LC
Sbjct: 868 NEQFPQIKVEIIDNELAKVYAISNKGVSDFRDYPELLRQAVSLARKMQDPLIEYSQLCNG 927
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
EILS + PL+ + +E + V+ TN+VG+D+NLA+ + + +QFI GLG
Sbjct: 928 DEEILSLRFHPLQEQIGKEELLEAVCLEFVNRTNEVGVDVNLAVQQAHKSNLVQFICGLG 987
Query: 677 PRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
PRK +L R L + + R VTA +G KVF+N GF+++ + S+ ++++L
Sbjct: 988 PRKGQALLRLLKQTNQRLENRTQLVTACHMGPKVFINCSGFIKIDTNSLGDSTEAYVEIL 1047
Query: 736 DDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDRHI 794
D +R+HPE+Y A+++A + D DDE A A+E + + P+ LK LD
Sbjct: 1048 DGSRVHPETYEWARKMAVDALEYD------DDEGANPAGALEEILEAPERLKDLDLDAFA 1101
Query: 795 KEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQ 851
+E +R+ NK TLY IR EL ++D R ++ + +E F M++ ET +T G++V
Sbjct: 1102 EELERQGFGNKSITLYDIRAELNCRYKDLRTPFRSANPEELFDMLTKETPETFYIGKMVT 1161
Query: 852 ATV-----RRVQGQR-----------------AICV------------------------ 865
A+V R+ QG++ C+
Sbjct: 1162 ASVVGIARRKPQGEQLDHANPVRNDETRLWQCPFCLKNDFPELSDVWNHFDAGACPGQAT 1221
Query: 866 -----LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
L++G++G + ++ SD + +++ G ++ C+I I R+ V + S+
Sbjct: 1222 GVKLKLDNGISGYIYIKNISDK-NVANPEERVSIGQLIHCRIMKIDVERFSVDCTSKSSD 1280
Query: 921 MRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
+ + ++ DPYY E+ + + E K+ + + + K R+IVHP F N++ EA
Sbjct: 1281 LLDKNHEWRPPRDPYYDTEQEEKDTRAENELKKNKQRQTYIK-RVIVHPAFHNISYVEAE 1339
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
K ++ + GE IIRPSS+G +LT+T KV D +Y H D+ E GK + +GKTL
Sbjct: 1340 KCMANMDQGEVIIRPSSKGADHLTITWKVADNIYQHIDVREEGKSNA-----FSLGKTLW 1394
Query: 1041 IGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIV 1097
IG + FEDLDE++ R++ P+ +H + +L ++ +R G K + +E+++ EK + P++I
Sbjct: 1395 IGGEEFEDLDEIIARHVTPMAAHARDLLYFKYYRDTNGGHKDKAEEVVKEEKKKNPSKIH 1454
Query: 1098 YGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP- 1156
Y S PG F+L+Y+ HE+I + P+GF+FRK++F+ + L +F+ H DP
Sbjct: 1455 YIVSASKSCPGKFLLSYLPRNKCRHEFISVTPEGFRFRKQLFDSVASLFKWFKEHFRDPI 1514
Query: 1157 QGDSAPSIRSVAAMVPMRS 1175
G P + P ++
Sbjct: 1515 PGGMTPGTPRASGRTPYQT 1533
>gi|189240315|ref|XP_967189.2| PREDICTED: similar to Spt6 CG12225-PA [Tribolium castaneum]
Length = 1797
Score = 478 bits (1229), Expect = e-131, Method: Compositional matrix adjust.
Identities = 357/1279 (27%), Positives = 599/1279 (46%), Gaps = 164/1279 (12%)
Query: 17 PTDGESIVDESTWIYNQ-LLSGTLPLFGQRGAGSPKEGHD---LSISRDDIMRFLDLLHL 72
P D + ES WIY Q T+ +E +I + I + LD +
Sbjct: 299 PEDSTELDVESEWIYKQAFCKATVSNMDANLTMEARERQKKGPQTIGK--IRKALDFMRN 356
Query: 73 QKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
Q+L++PFIA YRKE Q E+N ++ LW ++ D KW
Sbjct: 357 QQLEVPFIAFYRKEYV--------QPELNIND---------------LWKVYKYDAKWCQ 393
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAETEREVDDVDL 189
L+ RK L + ++K + +I + + + + DS + L + +T E+ DV
Sbjct: 394 LKSRKENLLALFEKMRSYQLDQIMKDPDAPIPENVRLIRDSDIERLNSVQTAEELQDVHN 453
Query: 190 KFNLH-------------------------------FPPGEVGVD--------------E 204
F L+ E G +
Sbjct: 454 HFVLYYAQDLPAMHAAWRAKEKERKKQEKRAARLKLIAESEEGAEIPEDMDDDQEDEPEP 513
Query: 205 GQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASN 264
K RS Y+ C+KAGL +A KFG + E L E+E P+E+A
Sbjct: 514 ETLKYANRSGSYALCTKAGLDALAKKFGLTPEHFAENLRDNYQRHEVEQEAVEPQEVAKQ 573
Query: 265 FKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFH 324
F C F S VLQ A++M A++I+ EP VRK VR +F + A ++ PT G ID H
Sbjct: 574 FVCTQFPSVDEVLQAAKYMVALQIAREPLVRKCVREVFFERAKMTVRPTKKGMKVIDETH 633
Query: 325 QFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSD 382
+K++++KP+R Q+L + AEEE LL +TI + ++ + K+ Y+ D
Sbjct: 634 NCYSMKYIKDKPVRDLTGDQFLKLTLAEEENLLTITINENIEGNTSGSYIDEVKQLYIRD 693
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
SK+ Q WN R ++ AL +LP + E + + AK +L + L+N + +
Sbjct: 694 EFSKNVQDWNALRMGCVERALTRCVLPDLRGELKRTLLAEAKESVLKACCRKLYNWIKIA 753
Query: 443 PYQRKDNDITPDE---EAAPRVLACCWGPGKPETTFVMLDS-SGEVVDVLFTGCLTLRSQ 498
PY D DE RV+ + P ++ F + + GE+ D L + R
Sbjct: 754 PYSVSFPDEDEDEWDTSKGIRVMGLAYVPDYSQSAFACIAAPDGEITDYLRLPHILKRKN 813
Query: 499 NVRDQQS--KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV 556
+ + + K++D L F+ +PHV+ +G + + DD+ II +VE
Sbjct: 814 SFKPDEKLMKESDLVTLRNFINMKKPHVIAIGGESREALMIADDLKAIITDLVE------ 867
Query: 557 GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP 616
+ ++ + D L ++Y S +++AV+L R +Q+PL + LC
Sbjct: 868 NEQFPQIKVEIIDNELAKVYAISNKGVSDFRDYPELLRQAVSLARKMQDPLIEYSQLCNG 927
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
EILS + PL+ + +E + V+ TN+VG+D+NLA+ + + +QFI GLG
Sbjct: 928 DEEILSLRFHPLQEQIGKEELLEAVCLEFVNRTNEVGVDVNLAVQQAHKSNLVQFICGLG 987
Query: 677 PRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
PRK +L R L + + R VTA +G KVF+N GF+++ + S+ ++++L
Sbjct: 988 PRKGQALLRLLKQTNQRLENRTQLVTACHMGPKVFINCSGFIKIDTNSLGDSTEAYVEIL 1047
Query: 736 DDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDRHI 794
D +R+HPE+Y A+++A + D DDE A A+E + + P+ LK LD
Sbjct: 1048 DGSRVHPETYEWARKMAVDALEYD------DDEGANPAGALEEILEAPERLKDLDLDAFA 1101
Query: 795 KEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQ 851
+E +R+ NK TLY IR EL ++D R ++ + +E F M++ ET +T G++V
Sbjct: 1102 EELERQGFGNKSITLYDIRAELNCRYKDLRTPFRSANPEELFDMLTKETPETFYIGKMVT 1161
Query: 852 ATV-----RRVQGQR-----------------AICV------------------------ 865
A+V R+ QG++ C+
Sbjct: 1162 ASVVGIARRKPQGEQLDHANPVRNDETRLWQCPFCLKNDFPELSDVWNHFDAGACPGQAT 1221
Query: 866 -----LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
L++G++G + ++ SD + +++ G ++ C+I I R+ V + S+
Sbjct: 1222 GVKLKLDNGISGYIYIKNISDK-NVANPEERVSIGQLIHCRIMKIDVERFSVDCTSKSSD 1280
Query: 921 MRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
+ + ++ DPYY E+ + + E K+ + + + K R+IVHP F N++ EA
Sbjct: 1281 LLDKNHEWRPPRDPYYDTEQEEKDTRAENELKKNKQRQTYIK-RVIVHPAFHNISYVEAE 1339
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
K ++ + GE IIRPSS+G +LT+T KV D +Y H D+ E GK + +GKTL
Sbjct: 1340 KCMANMDQGEVIIRPSSKGADHLTITWKVADNIYQHIDVREEGKSNA-----FSLGKTLW 1394
Query: 1041 IGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIV 1097
IG + FEDLDE++ R++ P+ +H + +L ++ +R G K + +E+++ EK + P++I
Sbjct: 1395 IGGEEFEDLDEIIARHVTPMAAHARDLLYFKYYRDTNGGHKDKAEEVVKEEKKKNPSKIH 1454
Query: 1098 YGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP- 1156
Y S PG F+L+Y+ HE+I + P+GF+FRK++F+ + L +F+ H DP
Sbjct: 1455 YIVSASKSCPGKFLLSYLPRNKCRHEFISVTPEGFRFRKQLFDSVASLFKWFKEHFRDPI 1514
Query: 1157 QGDSAPSIRSVAAMVPMRS 1175
G P + P ++
Sbjct: 1515 PGGMTPGTPRASGRTPYQT 1533
>gi|440912259|gb|ELR61843.1| Transcription elongation factor SPT6 [Bos grunniens mutus]
Length = 1723
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 364/1282 (28%), Positives = 603/1282 (47%), Gaps = 174/1282 (13%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I L + Q ++PFIA YRKE L +N+ LW
Sbjct: 356 IKEALGFMRNQHFEVPFIAFYRKEYVEPEL------HIND-----------------LWR 392
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
+ D+KW L+ RK L ++K + Y++ ++ L D I ++L+ + ER
Sbjct: 393 VWQWDEKWTQLRIRKENLTRLFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMER 447
Query: 183 --------EVDDVDLKFNLHF----PPGEVGVDEG------------------------- 205
E+ DV F L++ P +
Sbjct: 448 LKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKLKRVREEGDEEGDGEEAEDEEQ 507
Query: 206 ---QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMA 262
+ K+ R Y+ C AGL +A KFG + EQ G L E E P E+A
Sbjct: 508 RGPELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELA 567
Query: 263 SNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDS 322
++ C+ F + +AVL+GAR+M A++I+ EP VR+ +R F + A ++ PT G +D
Sbjct: 568 KDYVCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNISPTKKGRKDVDE 627
Query: 323 FHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCK 376
H K+L+ KP+++ D Q+L I AE+E LL + I + + F + K
Sbjct: 628 AHYAYSFKYLKNKPVKELRDDQFLKICLAEDEGLLTIDISIDMKGVEGYGSDQTYFEEIK 687
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
+ Y D S Q WN QR + ++ AL FL M KE ++ + AK +++ + L+
Sbjct: 688 QFYYRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLY 747
Query: 437 NKVSVGPYQRKDNDITPDEE-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVL 488
N + V PY R D + D++ RVL + + F +++ GEV D L
Sbjct: 748 NWLRVAPY-RPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFL 806
Query: 489 FTGCLTLRSQNVRDQQSK--KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
T R R+++ K D E L KF+++ +PHVV + N L +D+ I+
Sbjct: 807 RLPHFTKRRTAWREEEQKAGAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV- 865
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
H D G ++ + + D L LY NS+ S + +++AV+L R +Q+P
Sbjct: 866 -----HELDQGQQLSSIGVELIDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDP 920
Query: 607 LAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
L A +C +IL K PL+ + +E + ++ N+VG+D+N AI +
Sbjct: 921 LIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQ 980
Query: 667 APLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
A +Q++ GLGPRK L + L + + +R VT +G KVF+N GFL++ +
Sbjct: 981 ALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLG 1040
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLL 785
S+ +I++LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ L
Sbjct: 1041 DSTDSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERL 1096
Query: 786 KTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETED 842
K LD +E +R+ +K TLY IR EL ++D R Y+ P+ +E F M++ ET +
Sbjct: 1097 KDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPE 1156
Query: 843 TLAEGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE-- 887
T G+++ V RR QG+ +AI E+GL ++++ S+ W +
Sbjct: 1157 TFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSG 1216
Query: 888 -------------------------LSDKLHE--------GDILTCKIKSIQKNRYQVFL 914
LSDK+ + G + C+I I ++ L
Sbjct: 1217 SCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADL 1276
Query: 915 VCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQ 972
CR S++ RNN ++ + D YY + + +QE+ K K+ + K R+I HP F
Sbjct: 1277 TCRTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFH 1333
Query: 973 NVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSL 1032
N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 1334 NINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA----- 1388
Query: 1033 VGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEK 1089
+G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL K
Sbjct: 1389 FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTK 1448
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1149
E PT I Y E PG F+L Y P EY+ + P+GF++R ++F ++ L +F
Sbjct: 1449 KEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPTVNGLFRWF 1508
Query: 1150 QRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSR 1209
+ H DP PS S R+PA+ +T + + N R ++ P +
Sbjct: 1509 KDHYQDPVPGITPSSSSRT-----RTPASINATPA-------NINLADLTRAVNALPQNM 1556
Query: 1210 TGR--NDYRNGGGRDGHPSGLP 1229
T + N G+ +P+ P
Sbjct: 1557 TSQMFNAIAAVTGQGQNPNATP 1578
>gi|1401078|gb|AAC50821.1| putative chromatin structure regulator [Homo sapiens]
gi|119571501|gb|EAW51116.1| suppressor of Ty 6 homolog (S. cerevisiae), isoform CRA_a [Homo
sapiens]
Length = 1603
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 600/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 196 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 255
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 256 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 292
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 293 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 347
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 348 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 407
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 408 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 467
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 468 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 527
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL I + + F + K+ Y D S Q WN QR
Sbjct: 528 DQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 587
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 588 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 646
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 647 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 706
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 707 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 760
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 761 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 820
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 821 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 880
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 881 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 940
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 941 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 996
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 997 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1056
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1057 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1116
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1117 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1174
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1175 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1233
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1234 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1288
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1289 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1348
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1349 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1407
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1408 ----RTPASINATPA 1418
>gi|449479775|ref|XP_004177052.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor SPT6
[Taeniopygia guttata]
Length = 1727
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 364/1283 (28%), Positives = 602/1283 (46%), Gaps = 181/1283 (14%)
Query: 29 WIY-NQLLSGTLPL-----------FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLD 76
WIY N + T+ L GQ A + + S S I L+ + Q +
Sbjct: 316 WIYRNAFATPTISLQVKDXSSDYLDRGQPAASAARVSKGPS-SIQKITEGLNFMRNQHSE 374
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE L +N+ LW + D+KW L+ R
Sbjct: 375 VPFIAFYRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLKIR 411
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVD 188
K L ++K + Y++ ++ L D I ++L+ + ER E+ DV
Sbjct: 412 KQNLTRLFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVY 466
Query: 189 LKFNLHF----PPGEVGVDEG-----------------------------QYKRPKRSTK 215
F L++ P + + K+ R
Sbjct: 467 NHFLLYYGRDIPKMQNAAKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDM 526
Query: 216 YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQA 275
Y+ C AGL +A KFG + EQ G L E E P E+A ++ C+ F S +A
Sbjct: 527 YTICQAAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEA 586
Query: 276 VLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREK 335
VL+GAR+M A++I+ EP VR+ +R F + A ++ PT G ID H K+++ K
Sbjct: 587 VLEGARYMVALQIAREPLVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYMKNK 646
Query: 336 PLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQ 389
P+++ D Q+L + AE+E LL + I + + F + K+ Y D S Q
Sbjct: 647 PVKELRDDQFLKMSLAEDEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQ 706
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN 449
WN QR + ++ +L+ FL M KE ++ + AK ++L + L+N + V PY R D
Sbjct: 707 EWNRQRTMAIERSLNQFLYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVAPY-RPDQ 765
Query: 450 DITPDEE-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVR 501
+ D++ RVL + + F +++ GEV D L T R R
Sbjct: 766 QVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWR 825
Query: 502 DQQSKKNDQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHE 559
+++ +K Q E L KF+++ +PHVV + N L +D+ I+ H D G +
Sbjct: 826 EEEREKKAQDIETLKKFLLNKKPHVVTIAGENRDAQMLMEDVKRIV------HELDQGQQ 879
Query: 560 MDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGRE 619
+ + + D L LY NS+ S ++ +++AV+L R +Q+PL A +C +
Sbjct: 880 LSSIGVELVDNELAILYMNSKKSENEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDED 939
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRK 679
IL KL PL+ + +E + ++ N+VG+D+N AI A LQ++ GLGPRK
Sbjct: 940 ILCLKLHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRK 999
Query: 680 AASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
L + L + + R VT +G KVF+N GF+++ + S+ +I++LD +
Sbjct: 1000 GTHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGS 1059
Query: 739 RIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKK 798
R+HPE+Y A+++A + +E D + ++ A+E + + P+ LK LD +E +
Sbjct: 1060 RVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELE 1115
Query: 799 RE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV- 854
R+ +K TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V
Sbjct: 1116 RQGYGDKHITLYDIRAELSCRYKDLRTPYRSPNTEEVFNMLTKETPETFYIGKMIICNVT 1175
Query: 855 ----RRVQGQ-----------------------------------------RAICV---L 866
RR QG+ +AI V L
Sbjct: 1176 GIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRL 1235
Query: 867 ESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNN 924
++G+AG + + SD +++ G + C+I I ++ L CR S++ +NN
Sbjct: 1236 DNGVAGFIPTKFLSDKVVKRP-EERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDKNN 1294
Query: 925 RYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLS 984
++ + D YY + + +QE+ K K+ + K R+I HP F N++ +A K++
Sbjct: 1295 EWKLPK--DTYYDFDSEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNISFKQAEKMME 1351
Query: 985 AKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED 1044
+ G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G L I +
Sbjct: 1352 TMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDVREEGKENA-----FSLGSMLWINTE 1406
Query: 1045 TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFG 1101
FEDLDE+V RY+ P+ S + +L+++ ++ G K +++ELL K E PT I Y
Sbjct: 1407 EFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKLEELLIKTKKEKPTFIPYFIS 1466
Query: 1102 ISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSA 1161
+ PG F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP
Sbjct: 1467 ACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPTVNGLFRWFKDHYQDPVPGIT 1526
Query: 1162 PSIRSVAAMVPMRSPANGGSTAS 1184
PS S R+PA+ +T +
Sbjct: 1527 PSSSSRT-----RTPASINATPA 1544
>gi|354503611|ref|XP_003513874.1| PREDICTED: transcription elongation factor SPT6 [Cricetulus griseus]
Length = 1726
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 363/1275 (28%), Positives = 600/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKIGLAEDEGLLSIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + A+ ++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLVNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|344258442|gb|EGW14546.1| Transcription elongation factor SPT6 [Cricetulus griseus]
Length = 1725
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 363/1275 (28%), Positives = 600/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 318 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 377
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 378 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 414
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 415 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 469
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 470 YGRDIPKMQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 529
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 530 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 589
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 590 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 649
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 650 DQFLKIGLAEDEGLLSIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 709
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + A+ ++ + L+N + V PY R D + D++
Sbjct: 710 MAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPY-RPDQQVEEDDD 768
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 769 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 828
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 829 AQDIETLKKFLVNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 882
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 883 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 942
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 943 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1002
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1003 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1062
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1063 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1118
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1119 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1178
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1179 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1238
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1239 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1296
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1297 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1355
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1356 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1410
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1411 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1470
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1471 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1529
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1530 ----RTPASINATPA 1540
>gi|332848238|ref|XP_001143115.2| PREDICTED: transcription elongation factor SPT6 isoform 5 [Pan
troglodytes]
Length = 1726
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 357/1247 (28%), Positives = 590/1247 (47%), Gaps = 166/1247 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDP 1518
>gi|300797099|ref|NP_001178749.1| transcription elongation factor SPT6 [Rattus norvegicus]
Length = 1726
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 363/1275 (28%), Positives = 600/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKIGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + A+ ++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLVNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|351710397|gb|EHB13316.1| Transcription elongation factor SPT6 [Heterocephalus glaber]
Length = 1738
Score = 474 bits (1221), Expect = e-130, Method: Compositional matrix adjust.
Identities = 364/1287 (28%), Positives = 601/1287 (46%), Gaps = 183/1287 (14%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSNFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L + AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKMGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK- 507
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 508 -------------NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
D E L KF+++ +PHVV + N L +DI I+ H
Sbjct: 830 AKPFSSNFLSIQAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDIKRIV------HEL 883
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
D G ++ + + D L LY NS+ S + +++AV+L R +Q+PL A +C
Sbjct: 884 DQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVC 943
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
+IL K PL+ + +E + ++ N+VG+D+N AI + A +Q++ G
Sbjct: 944 SSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCG 1003
Query: 675 LGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
LGPRK L + L + + +R VT +G KVF+N GFL++ + S+ +I+
Sbjct: 1004 LGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIE 1063
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH 793
+LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ LK LD
Sbjct: 1064 VLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAF 1119
Query: 794 IKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
+E +R+ +K TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++
Sbjct: 1120 AEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLI 1179
Query: 851 QATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------- 887
V RR QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 ICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIG 1239
Query: 888 -----------------LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM- 921
LSDK+ + G + C+I I ++ L CR S++
Sbjct: 1240 VKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLM 1299
Query: 922 -RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
RNN ++ + D YY + + +QE+ K K+ + K R+I HP F N+ +A
Sbjct: 1300 DRNNEWKLPK--DTYYDFDAEATDHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAE 1356
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL
Sbjct: 1357 KMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLW 1411
Query: 1041 IGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIV 1097
I + FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I
Sbjct: 1412 INSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIP 1471
Query: 1098 YGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQ 1157
Y E PG F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP
Sbjct: 1472 YFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPV 1531
Query: 1158 GDSAPSIRSVAAMVPMRSPANGGSTAS 1184
PS S R+PA+ +T +
Sbjct: 1532 PGITPSSSSRT-----RTPASINATPA 1553
>gi|308810405|ref|XP_003082511.1| glycine-rich protein (ISS) [Ostreococcus tauri]
gi|116060980|emb|CAL56368.1| glycine-rich protein (ISS) [Ostreococcus tauri]
Length = 1508
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 369/1201 (30%), Positives = 612/1201 (50%), Gaps = 116/1201 (9%)
Query: 26 ESTWIYNQLL-----------SGTLPLFG-----------QRGAGSPKEGHDLSISRDD- 62
E+ WIY++++ +G L+G QR A + + L ++
Sbjct: 342 EAAWIYDRIMGRDSLQQQPTQAGYTLLYGWLDYESEVAHQQREAAIQAQSNTLPPEEEEE 401
Query: 63 ----IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVN---NDNNDDFERTPTLK 115
I FL + + L++P+I ++++ + LL+ E D ++R L+
Sbjct: 402 VIKCIAYFLSMTFDENLEMPYIVSQQRDDIMLLLRSSRAEEARPPMTAEGDGYKRV--LR 459
Query: 116 WHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRL-ALNQQLFDSISKS 174
++L A+ + D +++ L+ RK+ + + K E + E L + +Q D ++ +
Sbjct: 460 RFEILHAVLEWDDRYVRLEVRKARVAGTFAKLASE-----HGEGELGTIARQCMDLVNDA 514
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
ER VDD ++K NL F +D + +RP R ++Y + K G+ ++ + G
Sbjct: 515 F----LERHVDDAEVKTNLFF----TTIDGSKLRRPTRKSQYDNHVKRGIRDLVNMSGPI 566
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
+ G L D L + PEE+A + + + V+Q ++AA EI EP V
Sbjct: 567 ASTFGEDLKNGISSDLLANLP--PEEVAKVYFDQGYANVDEVIQAFVNVAATEIGAEPEV 624
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
R++ R + NA++ST PTP+G +D +H A VK L P+ AQ+ I + +
Sbjct: 625 RRWFRDEYWGNAIISTHPTPEGSDVVDPWHPIASVKRLSRMPVYYLTGAQFAQIVEGKRR 684
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
LL V I L ++ + ++ YLS+ S A WND R +++ A + L PS+ +E
Sbjct: 685 GLLVVDIGLAKEREQNVLQRMEQAYLSEAQSDLATAWNDVRRRVIRAAYEENLKPSLERE 744
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETT 474
+ + A+ L+ +W +S P+ R N D E R++A G T
Sbjct: 745 TLTQLGLDARDALMNVCADTIWAYMSYAPW-RPPNTEEFDMEV--RIVAAVSG---LPAT 798
Query: 475 FVMLDSSGEVVDVLFTGCLTLRSQNVRD---QQSKKNDQ-ERLLKFMMDHQPHVVVLGAV 530
FV LD+SGE+VD F C TL +N+ + Q S + D+ + L+ F++ H+PH+ +GA
Sbjct: 799 FVALDTSGELVD--FIECHTL-GRNIGNGGAQMSNQQDEIQALMDFVVRHRPHMCCVGAS 855
Query: 531 NLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQK 590
+ +K+ + ++ +++EE PR + E+ E++++ D+ + +L E ++ ++P +
Sbjct: 856 GMDSKRVKEALNLVVGRIIEEQPRAIPEEVSEIAVLLVDDGIAKLCETAKEPKAEMPEHQ 915
Query: 591 GNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLEN-FLTPDEKYGMIEQVMVDVT 649
++ RAVALGR L NP A+VA+L G EI S ++ L++ L +E+ ++E+ +V V
Sbjct: 916 PSILRAVALGRGLLNPAAVVASLVS-GGEIASLRMADLQDSVLGKEERVAIVERQLVSVV 974
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAA---SLQRSLVRAGAIFTRKDFVTAHGLG 706
NQ+G+DIN+A W ++++ GLGPRKA S RSL G + +R+ + +G
Sbjct: 975 NQIGVDINMASSHPWMSVLVRYLGGLGPRKATGVISAVRSL-EGGVVDSREQLRAS--MG 1031
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLN- 765
VF NA FLRV + DLLD TR HPE Y A+ + V +IE L
Sbjct: 1032 DVVFRNAAAFLRVTDA----------DLLDSTRCHPEHYDEAKAIV--VNALEIEEQLGS 1079
Query: 766 ----DDEDALEMAIE----HVRDRPDLLKTYLLDRHIKEKKRENK-RETLYLIRRELIHG 816
+ E L + ++ P +L+ Y +E + K E L IR E +
Sbjct: 1080 LEHYEQERMLAKVFDPKTWELKVAPLILEEYAEFLQSEEGGSKGKCLEVLREIRAEFRYP 1139
Query: 817 FQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ------GQRAICVLESGL 870
F+D R + S ++EF +++GET TLA G+++Q TV++++ G RA+CVL+SG+
Sbjct: 1140 FEDLRPAWTPLSAEDEFALLTGETVHTLASGKIIQCTVKKIEGPRDGRGARAVCVLDSGV 1199
Query: 871 AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS--IQKNRYQVFLVCRESEMRNNR--- 925
G + K D SDD + +K+ G ++T ++K+ + + V L C + N
Sbjct: 1200 TGYVEKYDLSDDQYFERIEEKVQPGQVITARVKANGVDVYGFTVQLACASQVLHPNETAQ 1259
Query: 926 ---YQHCQ-NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMK 981
+ HC + +PYY ++ + Q+KA +K K F R I HP FQNV +EA K
Sbjct: 1260 WEAHIHCNPDTNPYYIMDKQPGELRQKKAASKKT-KKLKFVPRKIDHPNFQNVDHEEAEK 1318
Query: 982 LLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI 1041
L + G+ IIRPS + + T K YDGV AH I E K + +L G+G L I
Sbjct: 1319 KLETADIGDVIIRPSGKTTKNICATFKTYDGVCAHVIIKETKK--SGVANL-GLGTPLII 1375
Query: 1042 GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFG 1101
E+ +EDLDEV+ R+I+P+VSH+K ML +RKF +G K E+D L+ + A P+ Y G
Sbjct: 1376 EEEEYEDLDEVMARHIEPIVSHVKHMLKHRKFMRGDKHEIDAALQQQLARNPSVRPYALG 1435
Query: 1102 ISH----EHPGTFILTYIRSTN--PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1155
+ H + F +++I S++ HHE I P GF++RK F +DRL+AYF+ +
Sbjct: 1436 VVHPPLNKGAPAFCISFIMSSSGRVHHEPIMAIPTGFRYRKMEFPSVDRLLAYFKVNCSK 1495
Query: 1156 P 1156
P
Sbjct: 1496 P 1496
>gi|119571503|gb|EAW51118.1| suppressor of Ty 6 homolog (S. cerevisiae), isoform CRA_c [Homo
sapiens]
Length = 1738
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 364/1287 (28%), Positives = 600/1287 (46%), Gaps = 183/1287 (14%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK- 507
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 508 -------------NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
D E L KF+++ +PHVV + N L +D+ I+ H
Sbjct: 830 AKPFSFNFLSIQAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HEL 883
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
D G ++ + + D L LY NS+ S + +++AV+L R +Q+PL A +C
Sbjct: 884 DQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVC 943
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
+IL K PL+ + +E + ++ N+VG+D+N AI + A +Q++ G
Sbjct: 944 SSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCG 1003
Query: 675 LGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
LGPRK L + L + + +R VT +G KVF+N GFL++ + S+ +I+
Sbjct: 1004 LGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIE 1063
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH 793
+LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ LK LD
Sbjct: 1064 VLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAF 1119
Query: 794 IKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
+E +R+ +K TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++
Sbjct: 1120 AEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLI 1179
Query: 851 QATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------- 887
V RR QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 ICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIG 1239
Query: 888 -----------------LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM- 921
LSDK+ + G + C+I I ++ L CR S++
Sbjct: 1240 VKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLM 1299
Query: 922 -RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
RNN ++ + D YY + + +QE+ K K+ + K R+I HP F N+ +A
Sbjct: 1300 DRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAE 1356
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL
Sbjct: 1357 KMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLW 1411
Query: 1041 IGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIV 1097
I + FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I
Sbjct: 1412 INSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIP 1471
Query: 1098 YGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQ 1157
Y E PG F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP
Sbjct: 1472 YFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPV 1531
Query: 1158 GDSAPSIRSVAAMVPMRSPANGGSTAS 1184
PS S R+PA+ +T +
Sbjct: 1532 PGITPSSSSRT-----RTPASINATPA 1553
>gi|166091434|ref|NP_033323.2| transcription elongation factor SPT6 [Mus musculus]
gi|51701937|sp|Q62383.2|SPT6H_MOUSE RecName: Full=Transcription elongation factor SPT6
gi|49119662|gb|AAH72657.1| Suppressor of Ty 6 homolog (S. cerevisiae) [Mus musculus]
Length = 1726
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 361/1275 (28%), Positives = 599/1275 (46%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKIGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + A+ ++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLVNKKPHVVTIAGENRDAQMLTEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV G+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSAGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS +
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSNRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|1401057|gb|AAB18950.1| Supt6h [Mus musculus]
Length = 1726
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 361/1275 (28%), Positives = 599/1275 (46%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQAFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKIGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + A+ ++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLVNKKPHVVTIAGENRDAQMLTEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV G+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSAGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS +
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSNRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>gi|395849144|ref|XP_003797195.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor SPT6
[Otolemur garnettii]
Length = 1715
Score = 471 bits (1212), Expect = e-129, Method: Compositional matrix adjust.
Identities = 317/1053 (30%), Positives = 525/1053 (49%), Gaps = 99/1053 (9%)
Query: 206 QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF 265
+ K+ R Y+ C AGL +A KFG + EQ G L E E P E+A ++
Sbjct: 503 ELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDY 562
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQ 325
C+ F + +AVL+GAR+M A++I+ EP VR+ +R F + A ++ PT G +D H
Sbjct: 563 VCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHY 622
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHY 379
K+L+ KP+++ D Q+L I AE+E LL + I + + F + K+ Y
Sbjct: 623 AYSFKYLKNKPVKELRDDQFLKIALAEDEGLLTIDICIDMKGVEGYGNDQTYFEEIKQFY 682
Query: 380 LSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKV 439
D S Q WN QR + ++ AL FL M KE ++ + AK +++ + L+N +
Sbjct: 683 YRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWL 742
Query: 440 SVGPYQRKDNDITPDEE-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTG 491
V PY R D + D++ RVL + + F +++ GEV D L
Sbjct: 743 RVAPY-RPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLP 801
Query: 492 CLTLRSQNVRDQQSKKNDQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
T R R+++ +K Q E L KF+++ +PHVV + N L +D+ I+
Sbjct: 802 HFTKRRTAWREEEREKKAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV---- 857
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
H D G ++ + + D L LY NS+ S + +++AV+L R +Q+PL
Sbjct: 858 --HELDQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIE 915
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
A +C +IL K PL+ + +E + ++ N+VG+D+N AI + A +
Sbjct: 916 FAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALI 975
Query: 670 QFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
Q++ GLGPRK L + L + + +R VT +G KVF+N GFL++ + S+
Sbjct: 976 QYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDST 1035
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTY 788
+I++LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ LK
Sbjct: 1036 DSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDL 1091
Query: 789 LLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
LD +E +R+ +K TLY IR EL ++D R Y+ P+ +E F M++ ET +T
Sbjct: 1092 DLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFY 1151
Query: 846 EGRVVQATV-----RRVQGQ---------------------------------------- 860
G+++ V RR QG+
Sbjct: 1152 IGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCP 1211
Query: 861 -RAICV---LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVC 916
+AI V L++G+ G + + SD +++ G + C+I I ++ L C
Sbjct: 1212 GQAIGVKTRLDNGVTGFIPTKFLSDKVVKRP-EERVKVGMTVHCRIMKIDIEKFSADLTC 1270
Query: 917 RESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNV 974
R S++ RNN ++ + D YY + + +QE+ K K+ + K R+I HP F N+
Sbjct: 1271 RTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNI 1327
Query: 975 TADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG 1034
+A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 1328 NFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FS 1382
Query: 1035 IGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAE 1091
+G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL K E
Sbjct: 1383 LGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKE 1442
Query: 1092 FPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQR 1151
PT I Y E PG F+L Y P EY+ + P+GF++R ++F ++ L +F+
Sbjct: 1443 KPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKD 1502
Query: 1152 HIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
H DP PS S R+PA+ +T +
Sbjct: 1503 HYQDPVPGITPSSSSRT-----RTPASINATPA 1530
>gi|383847186|ref|XP_003699236.1| PREDICTED: transcription elongation factor SPT6-like [Megachile
rotundata]
Length = 1758
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 353/1307 (27%), Positives = 620/1307 (47%), Gaps = 183/1307 (14%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRD------ 61
LR P +G +D E+ WIY Q R S ++ H + +++
Sbjct: 292 LRSVPVTPVAEGSDELDLEAEWIYKQAFC--------RPTVSIQDAHLNAEAKERARKGP 343
Query: 62 ----DIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWH 117
I + LD + Q ++PFI+ YRKE L L +N+
Sbjct: 344 QTIGKIKKALDFMRNQHFEVPFISFYRKEYVLPELN------IND--------------- 382
Query: 118 KVLWAIHDLDKKWLLLQKRKSALQSYYKK--RYEEESRRIYDETRLALNQQLF-DSISKS 174
LW ++ D KW L++RK L ++K Y+ + + L N ++ D +
Sbjct: 383 --LWKVYKFDAKWCQLRQRKENLLKLFEKMRNYQLDEIMKNPDAPLPDNVRVIKDDDIER 440
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPK----------------------- 211
L+ +T E++DV F L++ + E K+ K
Sbjct: 441 LKNVQTSEELNDVYHHFMLYYSHEIPAMQESVRKKEKEARKEARIQKRKQELLDAEENGE 500
Query: 212 -----------------------RSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG 248
RS YS C +AGL +A KFG + E L
Sbjct: 501 PPPEEEVEVEEEEEADDTLKQAVRSGPYSICRRAGLDTLAKKFGLTPEHFAENLRDNYQR 560
Query: 249 DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV 308
E++ P +A +F + + VL+ A+ M A++++ EP VRK VR ++M+ A +
Sbjct: 561 HEVDQEPTEPLTLAGEHCSQIFTTPEEVLKAAQLMVAIQLAREPLVRKCVREMYMERAKI 620
Query: 309 STCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPED 366
S PT G ID H G+K+L++KP+R Q+L + AEE+KL+ +T+ + +
Sbjct: 621 SVKPTKKGIKEIDENHPIYGMKYLKDKPVRDLVGDQFLNLVIAEEDKLITITLSDSIEGN 680
Query: 367 SLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSW 426
+ + + K+ Y D SK+ Q WN R ++ AL ++P++ KE ++ + AK
Sbjct: 681 TTSNYVDETKQLYYRDEFSKNVQDWNALRVGSVEIALTRMVIPNLKKELKTNLIAEAKEC 740
Query: 427 LLMEYGKALWNKVSVGPYQRKDNDITP---DEEAAPRVLACCWGPGKPETTFV-MLDSSG 482
++ + ++N + V PY + + D RV+ + P + F ++ G
Sbjct: 741 VMRACCRKMYNWIKVAPYTCEFPEEEDEEWDTSKGLRVMGLAYVPDYSQAAFTCLIAPDG 800
Query: 483 EVVDVLFTGCLTLRSQNVRDQQS--KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
E D L L R + R+ + K+ D + F+ +PHV+V+G + + D
Sbjct: 801 ECTDYLRLPHLMKRKNSYREDEKTMKEADLLAVRNFIATKKPHVIVIGGESREAMMIAAD 860
Query: 541 IYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALG 600
I E I ++EE + + + D L ++Y NS + +++A++L
Sbjct: 861 IKECIANLMEE------EQFPSIQVEICDNDLAKIYSNSNKGVSEFRDYPELLRQAISLA 914
Query: 601 RYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAI 660
R LQ+PL + LC E+L K L++ L +E I V+ N+VG+D+N A+
Sbjct: 915 RRLQDPLVEFSQLCTADEEVLCLKYHRLQDQLPKEELLDNIYLEFVNRVNEVGVDVNKAV 974
Query: 661 HREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRV 719
+ + +QF+ GLGPRK +L + L + + R VTA +G KVF+N GF+++
Sbjct: 975 QQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLENRTQLVTACHMGPKVFINCAGFIKI 1034
Query: 720 RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHV 778
+ S+ ++++LD +R+HPE+Y A+++A ++ DDEDA A+E +
Sbjct: 1035 DTNSLGDSTEAYVEVLDGSRVHPETYEWARKMA-------VDALEYDDEDANPAGALEEI 1087
Query: 779 RDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYM 835
+ P+ LK LD +E +R+ NK TLY IR EL ++D R Y+ PS + F +
Sbjct: 1088 LESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNCRYKDLRVPYQSPSAERLFDI 1147
Query: 836 ISGETEDTLAEGRVVQATV-----RRVQG-----------------QRAICV-------- 865
++ ET +T G++V ATV R+ QG Q C+
Sbjct: 1148 LTKETPETFYIGKLVLATVVGISHRKPQGDQLDQANPVRNDETGLWQCPFCLKNDFPELS 1207
Query: 866 ---------------------LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
L++G++G + ++ S D + +++ G I+ C+I
Sbjct: 1208 EVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLS-DRHVANPEERVSIGQIIHCRIIK 1266
Query: 905 IQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSE-QEKARKEKELAKKHFKE 963
I+ R+ V + S++ + ++ DP+Y + + ++ +E A+K K+ ++ + +
Sbjct: 1267 IEVERFSVECTSKSSDLADKNHEWRPQRDPFYDTDAEQKDAKVEEDAKKAKQ--RQTYVK 1324
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
R+IVHP F N++ EA KL+ + + GE+I+RPSS+G +LT+T KV D +Y H D+ E G
Sbjct: 1325 RVIVHPSFHNISFAEAEKLMQSMKQGEAIVRPSSKGADHLTVTWKVTDQIYQHIDVREEG 1384
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR---KGSKAE 1080
K+ + +G++L IG + FEDLDE++ R+++P+ ++ +L ++ ++ +G K +
Sbjct: 1385 KE-----NAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYALELLDFKYYKPTVEGIKDK 1439
Query: 1081 VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFE 1140
+E+L+ +K E P I Y + +PG F+L+Y+ T HEY+ + P+GF+FR +MF
Sbjct: 1440 AEEILKEQKKENPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTVSPEGFRFRGQMFG 1499
Query: 1141 DIDRLVAYFQRHIDDP-QGDSAPSIRSVAAMVPMRSPANGGSTASAG 1186
++ L +F+ H DP G S PS + ++ R+P + A +G
Sbjct: 1500 RVNDLFRWFKEHFRDPVPGQSTPS--TPRGVMTSRTPYHTTPGAVSG 1544
>gi|255076641|ref|XP_002501995.1| transcription elongation-nucleosome displacement protein [Micromonas
sp. RCC299]
gi|226517260|gb|ACO63253.1| transcription elongation-nucleosome displacement protein [Micromonas
sp. RCC299]
Length = 1566
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 350/1140 (30%), Positives = 573/1140 (50%), Gaps = 66/1140 (5%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLK---DLEQNEVNNDNNDDFERTPTLKWHKV 119
I L +H L++ ++A ++ L++ D + + N ER + V
Sbjct: 359 IAALLKAVHEDGLEVAYVAQNMRDVVEPLMRGRRDDSRPPPRDANGAVLERR--VHRRDV 416
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
+ I + D+++ L +R+ + E R E L+L S++ E A
Sbjct: 417 IHEIMEWDRRFSRLAQRRKEMMKKIDAAAEILERDAAPEQDLSL----LSSLANECEDAP 472
Query: 180 TEREVDDVDLKFNLHFPPGEVGVDEG----------QYKRPKRSTKYSSCSKAGLWEVAS 229
TE + DV+ L F V++ + RP ++Y+ K G+ ++
Sbjct: 473 TEEVLSDVEACLTLRFHEQLTEVEQSGKADGSLGLTRQLRPLNRSQYAHHCKKGIRDLLP 532
Query: 230 KFGYSSEQLGLQL-SLEKMGDELEDPKETPEEMASNFKC--AMFNSSQAVLQGARHMAAV 286
+G LG L S + P +PE +A + + +V++ H+AA
Sbjct: 533 TYGADPRDLGASLGSYRRTKVSQAVPDMSPEAVAEVYVGDETGYADVSSVIRSLVHVAAA 592
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWL 346
EI+ EP VR ++R A V T PTP G A+D FH A +K L+ KP +F A++
Sbjct: 593 EIAAEPAVRAWLRRAIRRKACVWTQPTPAGTEAMDPFHPLAEIKRLQGKPACEFGGAEFG 652
Query: 347 LIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+ KA + L+++ I LP+ + +L ++ + Y+ + VS+ A WN R
Sbjct: 653 AVLKAHRDGLIKLRIALPDVVIQELTNEMESAYVIEEVSEMADAWNKLRR-DALAGAKAA 711
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ---RKDNDITPDEEAAPRVLA 463
LLP++ +EA + A S + G++LW +V++ P++ R + D+E RVLA
Sbjct: 712 LLPALTREAAVALERDAASEIRRLCGESLWRRVALAPWKPDVRDHDQFGADDEVEVRVLA 771
Query: 464 CCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
WGPG P TTF MLD+ GE+VD L + + + ++ D +RL++FM++H+PH
Sbjct: 772 AVWGPGDPPTTFAMLDADGELVDFLQCPNIAVGGKFGAATARRQADMDRLIQFMIEHRPH 831
Query: 524 VVVLGAVN---LSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSR 580
V V+ +C +LK++I +I K++E+H R + E++ + + + D+++P L +
Sbjct: 832 VCVVATAPGQLHACRNLKENIALVIGKILEDHARAIPEEVNTIQLHFIDDTVPALAASCA 891
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
+ ++ AVALGRY++N A+VA L G E + L PL++ LTP+EK G+
Sbjct: 892 AMRTEFIEHSTEIRHAVALGRYIRNSAAVVAALAAGG-EARALNLGPLQDALTPEEKMGI 950
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL--VRAGAIFTRKD 698
E+ ++DV NQ G+D+N A+ WQ L +++GLGPRKA SL ++ GA+ +R
Sbjct: 951 FERGLIDVINQCGVDVNAAVAHPWQQYQLHYVAGLGPRKAGSLVAAVRGSSGGALESRDQ 1010
Query: 699 FVTAHG-LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYN 757
V+ G LG V+ NA LRV D+LD TRIHPE Y E+ ++
Sbjct: 1011 LVSELGALGPCVYKNAATTLRVIDD----------DVLDRTRIHPERYDHTLEIIANAFD 1060
Query: 758 RDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK-----RETLYLIRRE 812
D E + +E D + K +LD + + L +R E
Sbjct: 1061 YDFENLKSASASVKRKTLERAMDPDNWDKLAVLDLRAYAEYLNGQGSGWLLSALRELRME 1120
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQR--------AIC 864
L F + R ++ S EEF +++GET ++L+ G++V TV+R+ R +
Sbjct: 1121 LRDPFGEIRMSWQPLSTWEEFSLLTGETRESLSPGKIVHCTVKRLVPPRREEGTEGHVVV 1180
Query: 865 VLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRES----- 919
LESG+ G + K D SD D L K+ G ++ +I + V+L C+ S
Sbjct: 1181 QLESGVMGHIAKSDLSDRPVD-RLEHKVAVGQVIAARIINANYEENTVYLKCKGSALSAE 1239
Query: 920 EMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKH-FKERLIVHPCFQNVTADE 978
E + +Q N Y E ++ K +K K+ A + F R I HP FQN++A +
Sbjct: 1240 ESKRIEFQTWGNKLYYSCEPLDGEVAKPTKPKKRKDAASRQAFISRNIDHPLFQNISAQQ 1299
Query: 979 AMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKT 1038
A L K+ G+ ++RPSS+G + L++T+K++D + H DI EG K + + +G
Sbjct: 1300 AQAYLDNKDIGDIVLRPSSKGVTNLSITMKIFDSMVQHFDIKEGKKPGVGHTANLALGTP 1359
Query: 1039 LKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVY 1098
L + ++DLDEV R+++PLVS LK ++ +RKF +G++ EVD+ L+ E A +P Y
Sbjct: 1360 LTLEGTDYDDLDEVYARFVEPLVSSLKKLIKHRKFLRGTRREVDQRLKAELARYPDTRPY 1419
Query: 1099 GFGISHEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF-QRHIDD 1155
+SHEH G F L+ I RS N HEY+ + P GF+FR+R F D+DRL+ +F QR + D
Sbjct: 1420 ALSVSHEHSGFFCLSAILSRSGNVRHEYLSVKPGGFRFRQREFGDVDRLLNFFKQRPVPD 1479
>gi|307200348|gb|EFN80602.1| Transcription elongation factor SPT6 [Harpegnathos saltator]
Length = 1759
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 353/1295 (27%), Positives = 614/1295 (47%), Gaps = 175/1295 (13%)
Query: 9 LRKALAGPPTDG-ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHD------LSISRD 61
LR P +G + + E+ WIY Q P + A E + +I++
Sbjct: 292 LRSVPVTPVQEGSDELEQEAEWIYKQAFCK--PTISIQDAHLNAEAKERARKGPQTITK- 348
Query: 62 DIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLW 121
I + LD + Q ++PFI+ YRKE L L +N+ LW
Sbjct: 349 -IKKALDFMRNQHFEVPFISFYRKEYVLPELN------IND-----------------LW 384
Query: 122 AIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAA 178
++ D KW L++RK L ++K + I L + D + L+ A
Sbjct: 385 KVYKYDAKWCQLRQRKENLLKLFEKMRNYQLDEIMKNADAPLPDNVRVIKDDDIERLKNA 444
Query: 179 ETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPK--------------------------- 211
+T E++D+ F L++ + E K+ K
Sbjct: 445 QTSEELNDIYHHFMLYYNHEIPKMQETVRKKEKEARREARIQKRKQQIAEAEENGEDPPE 504
Query: 212 -------------------RSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
RS YS C KAGL +A KFG + E L E++
Sbjct: 505 EEPEIEEDEEVDETLKQAVRSGPYSICRKAGLDGLAKKFGLTPEHYAENLRDNYQRHEVD 564
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
P +A+ + F S + VL+ A+ M A++++ EP VRK VR ++M+ A +S P
Sbjct: 565 QEPTEPMTIAAEHCSSRFKSPEEVLKAAQLMVAIQLAREPLVRKCVREMYMERAKISITP 624
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNK 370
T G ID H +K+L++KP+R AQ+L + A+E+KL+ +++ + ++ N
Sbjct: 625 TKKGTKEIDENHPIYSMKYLKDKPVRDLVGAQFLNLVIADEDKLITISLSDSIEGNTSNN 684
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
+ K+ Y D SK+ Q WN R ++ AL+ ++PS+ KE R+ + AK ++
Sbjct: 685 YVDEMKQLYYRDEFSKNVQDWNALRVGSVEIALNRMVIPSLKKELRTNLVAEAKECVMRA 744
Query: 431 YGKALWNKVSVGPYQRKDNDITP---DEEAAPRVLACCWGPGKPETTFVMLDSS-GEVVD 486
+ ++N + V PY + + D RV+ + P + F L ++ GE D
Sbjct: 745 CCRKMYNWIKVAPYSCEFPEEEDEEWDTSKGLRVMGLSYVPDYSQAAFTCLVAADGECTD 804
Query: 487 VLFTGCLTLRSQNVR--DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEI 544
L L R + R ++ K+ D L F+ +PHVVV+ + + DI E
Sbjct: 805 YLRLPNLMKRKNSYRQDEKTMKEADLLALRNFIATKKPHVVVVSGESREAMMIAADIKEC 864
Query: 545 IFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQ 604
I + E+ + + + D L ++Y NS + ++ A++L R +Q
Sbjct: 865 ITHLTED------EQFPSIQVEICDNELAKIYSNSNKGVSEFRDYPQLLREAISLARRVQ 918
Query: 605 NPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+PL + LC EIL K L++ L +E + V+ N+VG+D+N A+ + +
Sbjct: 919 DPLVEFSQLCTADEEILCLKYHTLQDQLPKEELLENLYLEFVNRVNEVGVDVNKAVQQAY 978
Query: 665 QFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+QF+ GLGPRK +L + L + + R VTA +G KVF+N GF+++ +
Sbjct: 979 CGNLVQFVCGLGPRKGQALIKMLKQTNQRLENRTQLVTACHMGPKVFINCAGFIKIDTNS 1038
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRP 782
S+ ++++LD +R+HPE+Y A+++A ++ DDEDA A+E + + P
Sbjct: 1039 LGDSTEAYVEVLDGSRVHPETYEWARKMA-------VDALEYDDEDANPAGALEEILESP 1091
Query: 783 DLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGE 839
+ LK LD +E +R+ NK TLY IR EL ++D R QY+ PS ++ F +++ E
Sbjct: 1092 ERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKDLRVQYQSPSPEKLFDVLTKE 1151
Query: 840 TEDTLAEGRVVQATV-----RRVQG-----------------QRAICV------------ 865
T +T G++V ATV R+ QG Q C+
Sbjct: 1152 TPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRNEDTGLWQCPFCLKNDFPELSEVWN 1211
Query: 866 -----------------LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
L++G++G + ++ S D + +++ I+ C+I I+ +
Sbjct: 1212 HFDAGGCPGKATGVRLRLDNGISGYIHIKNLS-DRHVANPEERVSIDQIIHCRIVKIEVD 1270
Query: 909 RYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSE-QEKARKEKELAKKHFKERLIV 967
R+ V + S++ + + DPYY E + + +E A+K K+ ++ + +R+IV
Sbjct: 1271 RFSVECTSKSSDLADKNHDWRPQRDPYYDTEAEQKDMKVEEDAKKAKQ--RQIYVKRVIV 1328
Query: 968 HPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHK 1027
HP F N++ E++KL+ + GE+I+RPSS+G +LT+T KV D +Y H D+ E GK+
Sbjct: 1329 HPSFHNISFIESVKLMQTMKQGEAIVRPSSKGSDHLTVTWKVTDEIYQHIDVREEGKE-- 1386
Query: 1028 DIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR---KGSKAEVDEL 1084
+ +G++L IG + FEDLDE++ R+++P+ +++ +L ++ ++ +G K + +E+
Sbjct: 1387 ---NAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYVSELLDFKYYKPTVEGIKDKAEEV 1443
Query: 1085 LRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDR 1144
L+ ++ E P I Y + +PG F+L+Y+ T HE+I + P+GF+FR +MF ++
Sbjct: 1444 LKEQRKENPNSIPYIISAAKNYPGKFLLSYLPRTRCRHEFITVTPEGFRFRAQMFGRVND 1503
Query: 1145 LVAYFQRHIDDP-QGDSAPSIR--SVAAMVPMRSP 1176
L +F+ H DP G S PS ++ + P +P
Sbjct: 1504 LFRWFKEHFRDPLPGQSTPSTPRGAMTSRTPYTTP 1538
>gi|348540202|ref|XP_003457577.1| PREDICTED: transcription elongation factor SPT6-like [Oreochromis
niloticus]
Length = 1715
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 369/1343 (27%), Positives = 618/1343 (46%), Gaps = 175/1343 (13%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRD------DIM 64
+A+ P + + + +E+ WI+ S TL + Q G + SR I
Sbjct: 288 RAIPVKPAEDDELEEEAEWIFRHGFS-TLTISMQESTDYLDRGTTTNFSRKGPSTIAKIK 346
Query: 65 RFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + Q+ ++PFIA YRKE + E+N ++ LW +
Sbjct: 347 EALNFMRNQQFEVPFIAFYRKEYV--------EPELNIND---------------LWKVW 383
Query: 125 DLDKKWLLLQKRKSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSIS-KSLEAAETE 181
D+KW L+ RK L ++K Y+ E + LA + D+ + L+ +T
Sbjct: 384 QWDEKWTQLKTRKQNLTRLFQKMQSYQFEQISADPDKPLADGIRPLDTTDMERLKDVQTL 443
Query: 182 REVDDVDLKFNLHF---PPGEVGVDEGQYKRPK--------------------------- 211
E+ DV F L++ P + KR K
Sbjct: 444 EELGDVYNHFLLYYGRDIPKMQNAAKANKKRLKKIKEVSEDGDEEELEVEEEEEQKGPDL 503
Query: 212 ----RSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC 267
R YS C GL +A KFG + EQ G L E E P E+A ++ C
Sbjct: 504 KLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPVELAKDYVC 563
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFA 327
+ F++ + VL+G R+M A++I+ EP VR +R F + A V+ PT G +D H
Sbjct: 564 SQFSTPETVLEGTRYMVAMQIAREPLVRHVLRQTFQERAKVNIKPTKKGKKEVDEAHFAY 623
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLS 381
K+L+ KP+++ Q+L + AE+E LL + I + + F + K+ Y
Sbjct: 624 SFKYLKNKPVKELNGDQFLKMCLAEDEGLLTIDICIDLIGVKGYAGDQTYFDEIKQFYYR 683
Query: 382 DGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
D S Q WN QR L ++ AL+ FL P M KE +S + AK ++ + L+N + V
Sbjct: 684 DEFSHQVQEWNRQRTLAIERALNQFLYPQMAKELKSKLIAEAKESIIRSCCRRLYNWLKV 743
Query: 442 GPYQRKDNDITPDEE-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCL 493
PY R D + D++ RVL + P + F +++ GEV+D L
Sbjct: 744 APY-RPDQQVEEDDDLMDENQGKGIRVLGVAYAPSRDTPVFCALINGEGEVMDFLRLPYF 802
Query: 494 TLRSQNVR--DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
R R +++ K +D E L +F+ +PHVV + N + +DI I ++ +E
Sbjct: 803 MKRRNAFREDEREKKASDIENLKRFLSGKKPHVVAVAGENRDAQMIMEDIKRTIGELEQE 862
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
+ + + D L LY NS+ S +++AV++ R +Q+PL A
Sbjct: 863 ------SSLPAVGVELVDNELATLYMNSKKSETDFRDYPPLLRQAVSIARKIQDPLVEYA 916
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+C +IL KL PL+ + ++ + ++ N+VG+D+N AI + +Q+
Sbjct: 917 QVCSTDEDILCLKLHPLQEHVVKEDLLNALYCEFINRVNEVGVDVNRAIAHPHTQSLVQY 976
Query: 672 ISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
+ GLGPRK + L + L + + R VT +G KVF+N GF+++ + S+
Sbjct: 977 VCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDS 1036
Query: 731 FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
+I++LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ LK L
Sbjct: 1037 YIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDL 1092
Query: 791 DRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
D +E +R+ NK TLY IR EL ++D R Y+ P+ +E F M++ ET +T G
Sbjct: 1093 DAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVAYRVPNTEEVFNMLTKETPETFYIG 1152
Query: 848 RVVQATV-----RRVQGQ-----------------------------------------R 861
+++ + V RR QG+ +
Sbjct: 1153 KLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQ 1212
Query: 862 AICV---LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
AI V L++G+ G + + SD +++ G + C+I I ++ V L CR
Sbjct: 1213 AIGVRSRLDNGVQGFIPTKFLSDKVVKHP-EERVKVGMTVHCRIMKIDIEKFSVDLTCRT 1271
Query: 919 SEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADE 978
S++ + + D YY + S +QE+ K+K+ + K R+I HP F N++ ++
Sbjct: 1272 SDLMDKANEWKLPKDSYYDFDTESEDQKQEEELKKKQQRTPYIK-RVIAHPNFHNISFNQ 1330
Query: 979 AMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKT 1038
A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G T
Sbjct: 1331 AEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENA-----FSLGHT 1385
Query: 1039 LKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTR 1095
L I + FEDLDE+ RYI P+ S + +L ++ F++ G++ +++ELL K E PT
Sbjct: 1386 LWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQECNGGNREKMEELLIRTKREKPTF 1445
Query: 1096 IVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1155
I Y + PG FIL Y P EY+ + P GF++R ++F ++ L +F+ H +
Sbjct: 1446 IPYFISACKDLPGKFILGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWFKDHYQE 1505
Query: 1156 PQGDSAPSIRSVAAMVPMRSPANGGSTASAGS--GWGGSTNEGGWNRDRSSTPGSRTGR- 1212
P VP +P+N T + S + N R ++ P + T +
Sbjct: 1506 P--------------VPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQM 1551
Query: 1213 -NDYRNGGGRDGHPSGLPRPYGG 1234
N G+ +P+ P +G
Sbjct: 1552 FNAIAAVTGQGQNPNTTPAQWGS 1574
>gi|383864701|ref|XP_003707816.1| PREDICTED: transcription elongation factor SPT6-like [Megachile
rotundata]
Length = 1740
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 351/1294 (27%), Positives = 605/1294 (46%), Gaps = 170/1294 (13%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSI----SRDDI 63
LR P +G +D E+ WIY Q P + A +E + + + I
Sbjct: 288 LRTVPITPTAEGSDELDLEAEWIYKQAFCQ--PTISVQDAHLNEEAKERAKKGPQTVGKI 345
Query: 64 MRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAI 123
+ LD + Q ++PFI+ YRKE L L +N+ LW I
Sbjct: 346 KKALDFMRNQNFEVPFISFYRKEYVLPELN------IND-----------------LWKI 382
Query: 124 HDLDKKWLLLQKRKSALQSYYKK--RYEEESRRIYDETRLALNQQLF-DSISKSLEAAET 180
+ D KW L++RK L + K Y+ + + L N ++ D + L A+T
Sbjct: 383 YKFDAKWCQLKQRKENLLKLFDKMRNYQLDEIMKNPDAPLPENVRIIKDEDIERLRNAQT 442
Query: 181 EREVDDVDLKFNLHFPPGEVGVDE------------------------------------ 204
E++D+ F L++ + E
Sbjct: 443 FEELNDIYRHFMLYYSQDVSAMQEHTRKKEKEDRKKTRLEKRRQQIAEAEENGEEPPEEL 502
Query: 205 -----------GQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELED 253
K+P R Y C KAGL +A KFG S E L E++
Sbjct: 503 VAAEDDDEEADDTLKQPVRKGPYFICKKAGLDSLAKKFGLSPEHFAENLRDNYQRHEVDQ 562
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
P +A+ F F ++ VL + M A++++ EP VRK VR ++M+ A +S PT
Sbjct: 563 EPLEPTVVANEFCSTTFKTNDDVLNAVQLMVAIQLAHEPLVRKCVREMYMERAKISVIPT 622
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK--LPEDSLNKL 371
G ID H GVK+L++KP+R Q+L + AE++KL+ ++ + ++ N
Sbjct: 623 KKGIKEIDENHVLYGVKYLKDKPVRDLVGDQFLKLFIAEQDKLITISFSDIIEGNTTNNY 682
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
+ K+ Y D SKS Q WN R ++ AL+ ++P + KE RS + +K ++
Sbjct: 683 IDEIKQLYYRDEFSKSVQDWNALRTGSVEAALNRIIIPQLKKELRSNLLTESKECVMKAC 742
Query: 432 GKALWNKVSVGPYQ---RKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDS-SGEVVDV 487
+ ++N + + PY +++D + RV+ + P ++ F + S GE D
Sbjct: 743 CRKMYNWIKIAPYTCEFPEEDDEDWNTSRGIRVMGLAYVPDTSQSAFACVVSPEGECTDY 802
Query: 488 LFTGCLTLRSQNVRDQQS--KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
L L R + ++ + K+ D + F+ +PHVVV+G + + D+ E I
Sbjct: 803 LRLPHLMKRKNSFKENEKMMKEADLLAIRNFIATKKPHVVVIGGESREALMIAADVKECI 862
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
+ E+ + + + D L ++Y NS + +++AV+L R LQ+
Sbjct: 863 TNLAED------EQFPTIQVEIVDNELAKVYANSNRGVSEFRDYPDLLRQAVSLARRLQD 916
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PL + LC EI+ K PL++ L ++ I ++ N+VG+D+N A+ + +
Sbjct: 917 PLLEFSQLCTIDEEIMCLKYHPLQDQLPKEDLIENIYLEFINRINEVGVDLNRAVQQPYT 976
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
+QF+ GLGPRK +L + L + + R +TA +G KVFVN GF+++ +
Sbjct: 977 ANLVQFVCGLGPRKGQALIKILKQTNQRLENRTQLITACHMGPKVFVNCAGFIKIDTNSL 1036
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPD 783
S+ ++++LD +R+HPE+Y A+++A ++ DDEDA A+E + + P+
Sbjct: 1037 GDSTEAYVEVLDGSRVHPETYEWARKMA-------VDALEYDDEDANPAGALEEILESPE 1089
Query: 784 LLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
LK LD +E +R+ NK TLY IR EL ++D R Y+ S ++ F +++ ET
Sbjct: 1090 RLKDLDLDAFAEELERQGFGNKCITLYDIRAELNSRYKDLRVPYQSLSAEKLFDILTKET 1149
Query: 841 EDTLAEGRVVQATV-----RRVQG-----------------QRAICV------------- 865
+T G++V ATV R+ QG Q C+
Sbjct: 1150 PETFYVGKLVLATVVGITHRKPQGDQLDQANPVRNDETGLWQCPFCLKNDFPELSEVWNH 1209
Query: 866 ----------------LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNR 909
L++G++G + ++ SD + +++ G ++ C+I I+ R
Sbjct: 1210 FDAGACPGKATGVRLRLDNGISGYIHVKNLSDK-HVANPEERVRVGQVIHCRIIKIEVER 1268
Query: 910 YQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHP 969
+ + + S++ + ++ D YY E R + E+ K+ + + + K R+I+HP
Sbjct: 1269 FSIECTSKSSDLLDKNHEWRPQRDVYYDTEAEERDLKVEEDAKKVQQRQTYVK-RVIIHP 1327
Query: 970 CFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDI 1029
F N++ E KL+ + GE+IIRPSS+G +LT+T KV D +Y H D+ E GK++
Sbjct: 1328 SFHNISFAEVEKLMQTVKQGEAIIRPSSKGSDHLTVTWKVTDNIYQHIDVREEGKENT-- 1385
Query: 1030 KSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR---KGSKAEVDELLR 1086
+G++L IG + FEDLDE++ R+I+P+ +++ +L ++ ++ +G K + +E+L+
Sbjct: 1386 ---FSLGRSLWIGSEEFEDLDEIIARHINPMSAYVSELLDFKYYKSNVEGIKDKAEEILK 1442
Query: 1087 IEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLV 1146
+K + P I Y + +PG F+L+Y+ T HEY+ + P GF+FR +MF ++ L
Sbjct: 1443 EQKKQNPGGIPYIVSAAKNYPGKFMLSYLPRTRCRHEYVTITPDGFRFRGQMFSRVNDLF 1502
Query: 1147 AYFQRHIDDP-QGDSAPSIRSVAAMVPMRSPANG 1179
+F+ H DP G S P A R+P NG
Sbjct: 1503 RWFKEHFRDPIPGQSTPGTPHGAMTT--RTPYNG 1534
>gi|410915150|ref|XP_003971050.1| PREDICTED: transcription elongation factor SPT6-like [Takifugu
rubripes]
Length = 1717
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 365/1328 (27%), Positives = 612/1328 (46%), Gaps = 182/1328 (13%)
Query: 29 WIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRD------DIMRFLDLLHLQKLDIPFIAM 82
WI+ S TL + Q G + SR I L+ + Q ++PFIA
Sbjct: 304 WIFRHGFS-TLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQLFEVPFIAF 362
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE + E+N ++ LW + D+KW L+ RK L
Sbjct: 363 YRKEYV--------EPELNIND---------------LWKVWQWDEKWTQLKTRKQNLTR 399
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + +I + ++ L D I + L+ A+ ER E+ DV F L+
Sbjct: 400 LFQKMQSYQFEQISADP----DKPLADGI-RPLDTADMERLKDVQTLEELGDVYNHFLLY 454
Query: 195 F---PPGEVGVDEGQYKRPK------------------------------RSTKYSSCSK 221
+ P + KR K R YS C
Sbjct: 455 YGRDIPKMQNAAKANKKRLKKIKEVSEDGEEEELEIEEEEQKGPDLKLASRRDMYSICQS 514
Query: 222 AGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGAR 281
GL +A KFG + EQ G L E E P E+A ++ C+ F++ +AVL+G R
Sbjct: 515 VGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTR 574
Query: 282 HMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE 341
+M A++I+ EP VR +R F + A ++T PT G +D H K+L+ KP+++
Sbjct: 575 YMVAMQIAREPLVRHVLRQTFQERAKINTKPTKKGKKEVDEAHFAYSFKYLKNKPVKELN 634
Query: 342 DAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQR 395
Q+L + AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 635 GEQFLKMCLAEDEGLLAIDICIDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQR 694
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ-----RKDND 450
L ++ +L FL P M KE +S + AK ++ + L+N + V PY+ +D+D
Sbjct: 695 TLAIERSLTQFLYPQMAKELKSKLIAEAKESIVRSCCRRLYNWLKVAPYRPDHLAEEDDD 754
Query: 451 ITPDEEA-APRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
+ + + RVL + P + F +++ GEVVD L R R+++ +K
Sbjct: 755 LMEENQGKGIRVLGVAYAPSRDTPVFCALINGEGEVVDFLRLPYFMKRRNAFREEEREKK 814
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+ + +PHV+ + N + +D+ I ++ +E + + +
Sbjct: 815 AQDIENLKKFLTNKKPHVIAVAGENRDAQMIMEDMKRAIGELEQE------SALPTVGVE 868
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S +++AV++ R +Q+PL A +C +IL KL
Sbjct: 869 LIDNELATLYMNSKKSEADFRDYPPLLRQAVSVARKIQDPLMEYAQVCSTDEDILCLKLH 928
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + ++ + ++ N+VG+D+N AI + +Q++ GLGPRK + L +
Sbjct: 929 PLQEHVVKEDLLSALYCEFINRVNEVGVDVNKAIAHPHTQSLVQYVCGLGPRKGSHLLKI 988
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + R VT +G KVF+N GF+++ + S+ +I++LD +R+HPE+Y
Sbjct: 989 LKQNNNRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETY 1048
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ NK
Sbjct: 1049 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNK 1104
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ + V RR
Sbjct: 1105 GITLYDIRAELSCRYKDLRVPYRVPNTEEVFNMVTKETPETFYIGKLITSIVTGIAHRRP 1164
Query: 858 QGQ-----------------------------------------RAICV---LESGLAGM 873
QG+ +AI V L++G+ G
Sbjct: 1165 QGESYDQAIRNDATGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRSRLDNGVQGF 1224
Query: 874 LMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLD 933
+ + SD +++ G + C+I I ++ V L CR S++ + + D
Sbjct: 1225 IPTKFLSDKVVKHP-EERVKVGMTVHCRIMKIDIEKFSVDLTCRTSDLMDKANEWKLPKD 1283
Query: 934 PYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESII 993
YY + S + ++ K+K+ + K R+I HP F N++ ++A K++ + G+ II
Sbjct: 1284 SYYDFDTESEDQKLDEELKKKQQRTPYIK-RVIAHPNFHNISFNQAEKMMETLDQGDLII 1342
Query: 994 RPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVV 1053
RPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1343 RPSSKGENHLTVTWKVADGIYQHVDVKEEGKENA-----FSLGHTLWINTEEFEDLDEIT 1397
Query: 1054 DRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTF 1110
RYI P+ S + +L ++ F++ GSK +++ELL K E PT I Y + PG F
Sbjct: 1398 ARYIQPMASFARDLLGHKYFQECSGGSKEKMEELLVRTKREKPTFIPYFVSACKDLPGKF 1457
Query: 1111 ILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAM 1170
+L Y P EY+ + P GF++R ++F ++ L +F+ H +P
Sbjct: 1458 LLGYQPRGKPRVEYVTITPDGFRYRSQIFPTVNGLFRWFKDHYHEP-------------- 1503
Query: 1171 VPMRSPANGGSTASAGS--GWGGSTNEGGWNRDRSSTPGSRTGR--NDYRNGGGRDGHPS 1226
VP +P+N T + S + N R ++ P + T + N G+ +P+
Sbjct: 1504 VPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAVTGQGQNPN 1563
Query: 1227 GLPRPYGG 1234
P +G
Sbjct: 1564 TTPAQWGS 1571
>gi|37359802|dbj|BAC97879.1| mKIAA0162 protein [Mus musculus]
Length = 1229
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 317/1052 (30%), Positives = 527/1052 (50%), Gaps = 97/1052 (9%)
Query: 206 QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF 265
+ K+ R Y+ C AGL +A KFG + EQ G L E E P E+A ++
Sbjct: 17 ELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDY 76
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQ 325
C+ F + +AVL+GAR+M A++I+ EP VR+ +R F + A ++ PT G +D H
Sbjct: 77 VCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHY 136
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHY 379
K+L+ KP+++ D Q+L I AE+E LL + I + + F + K+ Y
Sbjct: 137 AYSFKYLKNKPVKELRDDQFLKIGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFY 196
Query: 380 LSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKV 439
D S Q WN QR + ++ AL FL M KE ++ + A+ ++ + L+N +
Sbjct: 197 YRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWL 256
Query: 440 SVGPYQRKDNDITPDEE-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTG 491
V PY R D + D++ RVL + + F +++ GEV D L
Sbjct: 257 RVAPY-RPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLP 315
Query: 492 CLTLRSQNVRDQQSKKNDQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
T R R+++ +K Q E L KF+++ +PHVV + N L +D+ I+
Sbjct: 316 HFTKRRTAWREEEREKKAQDIETLKKFLVNKKPHVVTIAGENRDAQMLTEDVKRIV---- 371
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
H D G ++ + + D L LY NS+ S + +++AV+L R +Q+PL
Sbjct: 372 --HELDQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIE 429
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
A +C +IL K PL+ + +E + ++ N+VG+D+N AI + A +
Sbjct: 430 FAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALI 489
Query: 670 QFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
Q++ GLGPRK L + L + + +R VT +G KVF+N GFL++ + S+
Sbjct: 490 QYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDST 549
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTY 788
+I++LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ LK
Sbjct: 550 DSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDL 605
Query: 789 LLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
LD +E +R+ +K TLY IR EL ++D R Y+ P+ +E F M++ ET +T
Sbjct: 606 DLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFY 665
Query: 846 EGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE----- 887
G+++ V RR QG+ +AI E+GL ++++ S+ W +
Sbjct: 666 IGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCP 725
Query: 888 ----------------------LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCR 917
LSDK+ + G + C+I I ++ L CR
Sbjct: 726 GQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCR 785
Query: 918 ESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVT 975
S++ RNN ++ + D YY + + +QE+ K K+ + K R+I HP F N+
Sbjct: 786 TSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNIN 842
Query: 976 ADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGI 1035
+A K++ + G+ IIRPSS+G ++LT+T KV G+Y H D+ E GK++ +
Sbjct: 843 FKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSAGIYQHVDVREEGKENA-----FSL 897
Query: 1036 GKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEF 1092
G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL K E
Sbjct: 898 GATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEK 957
Query: 1093 PTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRH 1152
PT I Y E PG F+L Y P EY+ + P+GF++R ++F ++ L +F+ H
Sbjct: 958 PTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDH 1017
Query: 1153 IDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
DP PS + R+PA+ +T +
Sbjct: 1018 YQDPVPGITPSSSNRT-----RTPASINATPA 1044
>gi|432896566|ref|XP_004076323.1| PREDICTED: transcription elongation factor SPT6-like [Oryzias
latipes]
Length = 1682
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 362/1282 (28%), Positives = 597/1282 (46%), Gaps = 184/1282 (14%)
Query: 29 WIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRD------DIMRFLDLLHLQKLDIPFIAM 82
WI+ S TL + Q G + SR I L+ + Q+ ++PFIA
Sbjct: 305 WIFRHGFS-TLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFEVPFIAF 363
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE + E+N ++ LW + D+KW L+ RK L
Sbjct: 364 YRKEYV--------EPELNIND---------------LWKVWQWDEKWTQLRTRKQNLTR 400
Query: 143 YYKK--RYEEESRRIYDETRLALNQQLFDSIS-KSLEAAETEREVDDVDLKFNLHFPPGE 199
++K Y+ E + LA + D+ + L+ +T E+ DV F L++
Sbjct: 401 LFQKMQSYQFEQISADPDKPLADGVRPLDTADMERLKDVQTLEELGDVYNHFLLYY---- 456
Query: 200 VGVDEGQYKRPKRSTK---------------------------------------YSSCS 220
G D + + +STK YS C
Sbjct: 457 -GRDIPKMQNAAKSTKKRLKKIREVTEDGEEEELEIEEEEEQKAPDLKQASRRDMYSICQ 515
Query: 221 KAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGA 280
GL +A KFG + EQ G L E E P E+A ++ C+ F++ + VL G
Sbjct: 516 SVGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFSTPENVLVGT 575
Query: 281 RHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF 340
R+M A++I+ EP VR +R F + A ++ PT G +D H K+L+ KP+++
Sbjct: 576 RYMVAMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKEL 635
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQ 394
Q+L + AEEE LL + I + + F + K+ Y D S Q WN Q
Sbjct: 636 NGDQFLKMCLAEEEGLLTIDICIDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQ 695
Query: 395 RELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD 454
R L ++ AL+ FL P M KE +S + AK ++ + L+N + V PY R D + D
Sbjct: 696 RTLAIERALNQFLYPQMAKELKSKLIAEAKENIVRSCCRRLYNWLKVAPY-RPDQQVEED 754
Query: 455 EE-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVR--DQQ 504
++ RVL + P + F +++ GEVVD L R R +++
Sbjct: 755 DDLMDESQGKGIRVLGVAYAPSRDTPVFCALINGEGEVVDFLRLPYFMKRRNAFREDERE 814
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
K ND E L KF+ +PHVV + N + +DI I ++ +E + +
Sbjct: 815 KKANDIENLKKFLSSKKPHVVAVAGENRDAQMIMEDIKRTISELEQE------SSLSPVG 868
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
+ D L LY NS+ S + +++AV++ R +Q+PL A +C +IL K
Sbjct: 869 VELVDNELATLYMNSKKSENDFRDYPPLLRQAVSIARKIQDPLLEYAQVCSTDEDILCLK 928
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
L PL+ + ++ + ++ N+VG+D+N AI + +Q++ GLG RK + L
Sbjct: 929 LHPLQEHVVKEDLLSALYCEFINRVNEVGVDVNRAIAHPHTQSLVQYVCGLGSRKGSHLL 988
Query: 685 RSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
+ L + + R VT +G KVF+N GF+++ + S+ +I++LD +R+HPE
Sbjct: 989 KILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPE 1048
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE--- 800
+Y A+++A + +E D + ++ A+E + + P+ LK LD +E +R+
Sbjct: 1049 TYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYG 1104
Query: 801 NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----R 855
NK TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ + V R
Sbjct: 1105 NKGITLYDIRAELSCRYKDLRVLYRVPNTEEVFNMLTKETPETFYIGKLITSIVTGIAHR 1164
Query: 856 RVQGQ-----------------------------------------RAICV---LESGLA 871
R QG+ +AI V L++G+
Sbjct: 1165 RPQGESYDQAIRNDATGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRSRLDNGVQ 1224
Query: 872 GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHC 929
G + + SD +++ G + C+I I ++ V L CR S++ +NN ++
Sbjct: 1225 GFIPTKFLSDKVVKHP-EERVKVGMTVHCRIMKIDIEKFSVDLTCRTSDLMDKNNEWKLP 1283
Query: 930 QNLDPYYHEERSSRQSEQEKARKEKELAKKH----FKERLIVHPCFQNVTADEAMKLLSA 985
+ D YY + +E E + ++EL KK + +R+I HP F N++ ++A K++
Sbjct: 1284 K--DTYYDFD-----TEAEDQKHDEELKKKQQRTPYIKRVIAHPNFHNISFNQAEKMMET 1336
Query: 986 KEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDT 1045
+ G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I +
Sbjct: 1337 LDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENA-----FSLGHTLWINNEE 1391
Query: 1046 FEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGI 1102
FEDLDE++ RYI P+ S + +L ++ F+ GS+ +++E L K E PT I Y
Sbjct: 1392 FEDLDEIIARYIQPMASFARDLLGHKYFQDCNGGSREKMEEALIKTKREKPTFIPYFISA 1451
Query: 1103 SHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAP 1162
+ PG FIL Y P EY+ + P GF++R ++F ++ L +F+ H +P P
Sbjct: 1452 CKDLPGKFILGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWFKDHYQEPVPGVTP 1511
Query: 1163 SIRSVAAMVPMRSPANGGSTAS 1184
S S R+PA+ +T +
Sbjct: 1512 SNSSRT-----RTPASLNATPA 1528
>gi|350404740|ref|XP_003487205.1| PREDICTED: transcription elongation factor SPT6-like [Bombus
impatiens]
Length = 1732
Score = 461 bits (1187), Expect = e-126, Method: Compositional matrix adjust.
Identities = 358/1299 (27%), Positives = 608/1299 (46%), Gaps = 181/1299 (13%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQ-LLSGTLPL----FGQRGAGSPKEGHDLSISRDD 62
LR P +G +D E+ WIY Q T+ + + K+G +I +
Sbjct: 281 LRAVPIIPTVEGSDELDLEAKWIYKQAFCQPTISIQDSHLNEEAKERAKKGPQ-TIGK-- 337
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I + LD + Q ++PFIA YRKE L L +N+ LW
Sbjct: 338 IKKALDFMRNQNFEVPFIAFYRKEYVLPELN------IND-----------------LWK 374
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF---DSISKSLEAAE 179
I+ D KW L++RK L ++K + + I L + D + L+ A
Sbjct: 375 IYKFDVKWCYLKQRKENLLKLFEKMRDFQLDEIMKNPDAPLPDNIRVIKDDDIERLKNAH 434
Query: 180 TEREVDDVDLKFNLHFPPGEVGVDE----------------------------------- 204
T E++D+ F L++ + E
Sbjct: 435 TFEELNDIYRHFMLYYNQDVSSMQEIARKKEKQAQRKAKLEKRKQQLAEAEENGEDLSEI 494
Query: 205 -----------GQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDEL-E 252
K+P R Y C KAGL +FG S E L E+ +
Sbjct: 495 PDAEDEEEEIDESLKQPVRKGPYYICGKAGLDGFTKRFGLSPEHFAENLRDNYQRHEVDQ 554
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
DP E P +A+ F A+F +S V++ A+ M A++++ EP VRK VR ++M+ A VS P
Sbjct: 555 DPIE-PAIVANEFCSAIFTTSDEVVKAAQLMVAIQLAHEPLVRKCVREMYMERAKVSVKP 613
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK--LPEDSLNK 370
T G ID H G+K+L+ KP+R Q+L + AEE+KL+ + + ++ N
Sbjct: 614 TKKGIKEIDEGHAIYGLKYLKNKPVRDLVGDQFLKLIIAEEDKLITLYFSDMIEGNTSNN 673
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
+ K+ Y D SKS Q WN R ++ AL+ ++P + KE RS + AK ++
Sbjct: 674 YIDEIKQLYYRDEFSKSVQDWNALRTGSVEVALNRIIIPQLKKELRSNLLLEAKECVMKA 733
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEE-------AAPRVLACCWGPGKPETTFV-MLDSSG 482
+ ++N + + PY + PDE+ RV+ + P + F ++ G
Sbjct: 734 CCRKMYNWIKIAPYACE----FPDEDDEDWNTSKGIRVMGLAYVPDPSQAAFTCIISPEG 789
Query: 483 EVVDVLFTGCLTLRSQNVRDQQS--KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
E D L L R + R+ + K+ D + F+ +PHVVV+ + + D
Sbjct: 790 ECTDYLRLPHLLKRKNSFRENEKILKEVDLLGIKNFIATKKPHVVVVSGESREALMIVSD 849
Query: 541 IYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALG 600
I E I + EE + + + D L ++Y NS + +++A++L
Sbjct: 850 IKECIANLAEE------EKFPTVPVEICDNELAKVYANSNRGISEFRDYPEVLRQAISLA 903
Query: 601 RYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAI 660
R +Q+PL + LC EIL K PL++ L D+ + ++ N+VG+D+N A+
Sbjct: 904 RKIQDPLLEFSQLCTIDEEILCLKYHPLQDQLPKDDLIENLYLEFINRINEVGVDLNKAV 963
Query: 661 HREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRV 719
+ + +QF+ GLGPRK +L + L ++ + R +TA +G KVFVN GF+++
Sbjct: 964 QQPYTANLVQFVCGLGPRKGQALIKILKQSNQRLENRTQLITACHMGPKVFVNCAGFIKI 1023
Query: 720 RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHV 778
+ S+ ++++LD +R+HPE+Y A+++A ++ DDEDA A+E +
Sbjct: 1024 DTNSLGDSTEAYVEVLDGSRVHPETYEWARKMA-------VDALEYDDEDANPAGALEEI 1076
Query: 779 RDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYM 835
+ P+ LK LD +E +R+ NK TLY IR EL ++D R Y+ + ++ F +
Sbjct: 1077 LESPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNCRYKDLRVPYQSLNTEKLFDI 1136
Query: 836 ISGETEDTLAEGRVVQATV-----RRVQG-----------------QRAICV-------- 865
++ ET +T G++V ATV RR QG Q C+
Sbjct: 1137 LTKETPETFYVGKLVLATVVGISHRRPQGDQLDQANPVRNDETGLWQCPFCLKNDFPELS 1196
Query: 866 ---------------------LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
L++G++G + ++ SD + +++ G ++ C+I
Sbjct: 1197 EVWNHFDAGACPGKATGIRLRLDNGISGYIHVKNLSDK-HVANPEERVRVGQVIHCRIIK 1255
Query: 905 IQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKER 964
I+ R+ V + S++ + ++ D YY E + ++ E+ K+ + + + K R
Sbjct: 1256 IEVERFSVECTSKTSDLIDKNHEWRPQRDVYYEAEAEEKDTKTEEDAKKLQQRQTYVK-R 1314
Query: 965 LIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGK 1024
+I+HP F N++ EA KL+ + GE+IIRPSS+G +LT+T KV + +Y H DI E GK
Sbjct: 1315 VIIHPSFHNISFAEAEKLMLTVKQGEAIIRPSSKGSDHLTVTWKVTENIYQHIDIREEGK 1374
Query: 1025 DHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR---KGSKAEV 1081
++ +G++L IG + FEDLDE++ R+I+P+ ++ +L ++ ++ +G K +
Sbjct: 1375 ENT-----FSLGRSLWIGNEEFEDLDEIIARHINPMAAYTSELLDFKYYKTSVEGIKDKA 1429
Query: 1082 DELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFED 1141
+E+L+ +K + P I Y + +PG F+L+Y+ HEY+ + P GF+FR +MF
Sbjct: 1430 EEILKEQKKQNPGGIPYIVSAAKNYPGKFLLSYLPRIRCRHEYVTVIPDGFRFRGQMFSR 1489
Query: 1142 IDRLVAYFQRHIDDP-QGDSAPSIRSVAAMVPMRSPANG 1179
I+ L +F+ H DP G + P + + R+P NG
Sbjct: 1490 INDLFRWFKEHFRDPIPGQATPG--TPHGTMTSRTPYNG 1526
>gi|38648673|gb|AAH63248.1| Suppressor of Ty 6 homolog (S. cerevisiae) [Danio rerio]
Length = 1726
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 376/1343 (27%), Positives = 631/1343 (46%), Gaps = 185/1343 (13%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRD------DIM 64
+A+ P + + + +E+ WIY S T + Q G + SR I
Sbjct: 290 RAIPVKPAEDDELEEEAEWIYRNAFS-TPTISMQESTDYLDRGTTTNFSRKGPSTIAKIK 348
Query: 65 RFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + Q ++PFIA YRKE + E+N ++ LW +
Sbjct: 349 EALNFMRNQHFEVPFIAFYRKEYV--------EPELNIND---------------LWKVW 385
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER-- 182
D+KW L+ RK L +++ + +I + ++ L DS ++ L+ A+ ER
Sbjct: 386 QWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADP----DKPLADS-TRPLDTADMERLK 440
Query: 183 ------EVDDVDLKFNLHF-------------------PPGEVGVDEGQ----------- 206
E+ DV F L++ EV ++G+
Sbjct: 441 DVQSIDELGDVYNHFLLYYGRDIPKMQNAAKGGKKKLKKIKEVSEEDGEEAEVEEEEEEE 500
Query: 207 ------YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEE 260
K+ R YS C AGL +A KFG + EQ G L E E P E
Sbjct: 501 EQKGPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLE 560
Query: 261 MASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAI 320
+A ++ C+ FN+ +AVL+GAR+M A++I+ EP VR +R F + A ++ PT G +
Sbjct: 561 LAKDYVCSQFNTPEAVLEGARYMVAMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKDV 620
Query: 321 DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL-----NKLFSDC 375
D H K+L+ KP+++ Q+L + AEEE LL + I + + F +
Sbjct: 621 DEAHFAYSFKYLKNKPVKELSGDQFLKMCLAEEEGLLAIDICIDLVGVKGYGDQTYFDEI 680
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
K+ Y D S Q WN QR L ++ +L FL P M KE ++ + AK ++ K L
Sbjct: 681 KQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNKLIAEAKDNIVKSCCKKL 740
Query: 436 WNKVSVGPYQRKDNDITPDEE-------AAPRVLACCWGPGKPETTFV-MLDSSGEVVDV 487
+N + V PY R D + D++ RVL + G+ F +++ GEVVD
Sbjct: 741 YNWLKVAPY-RPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDTPVFCSLINGEGEVVDF 799
Query: 488 LFTGCLTLRSQNVR--DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
L R R +++ K+ D E L KF++ +PHVV + N + +DI I
Sbjct: 800 LRLPYFLKRRNAWREDEREKKQQDVENLKKFLLSKKPHVVAVSGENRDAHMVMEDIKRTI 859
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
++ + V + + D L LY NS+ S +++AV++ R +Q+
Sbjct: 860 SELEQNSSLPV------VGVELVDNELAVLYMNSKKSEADFRDYPPLLRQAVSVARKIQD 913
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PL A +C +IL KL PL+ + +E + ++ N+VG+D+N AI +
Sbjct: 914 PLVEFAQVCSTDDDILCLKLHPLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYT 973
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
+ +Q+I GLGPRK + L + L + + R VT +G KVF+N GF+++ +
Sbjct: 974 QSLVQYICGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASL 1033
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL 784
S+ +I++LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+
Sbjct: 1034 GDSTDSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPER 1089
Query: 785 LKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE 841
LK LD +E +R+ NK TLY IR EL ++D R Y+ P+ +E F M++ ET
Sbjct: 1090 LKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKETP 1149
Query: 842 DTLAEGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE- 887
+T G+++ V RR QG+ +AI E+GL ++++ S+ W +
Sbjct: 1150 ETFYIGKLITCVVTNIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDS 1209
Query: 888 --------------------------LSDKLHE--------GDILTCKIKSIQKNRYQVF 913
LSDK+ + G + C+I I ++ V
Sbjct: 1210 GSCPGQAIGVRTRLDNAVMGFIPTKFLSDKVVKHPEERVKLGMTVHCRIMKIDIEKFNVD 1269
Query: 914 LVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCF 971
L CR S++ +NN ++ + D YY + + +QE+ +K+K+ + K R+I HP F
Sbjct: 1270 LTCRTSDLSDKNNEWKLPK--DTYYDFDAETDDVKQEEEQKKKQQRTTYIK-RVIAHPSF 1326
Query: 972 QNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKS 1031
N+ +A K++ + + G+ +IRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 1327 HNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENA---- 1382
Query: 1032 LVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIE 1088
+G TL I + FEDLDE+ RY+ P+ + + +L ++ F + G + +++ELL
Sbjct: 1383 -FSLGHTLWINTEEFEDLDEITARYVQPMAAFARDLLGHKYFHECNGGDRKKMEELLVRT 1441
Query: 1089 KAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAY 1148
K E PT I Y + PG F+L Y P EY+ + P GF++R ++F ++ L +
Sbjct: 1442 KKEKPTFIPYYISACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRW 1501
Query: 1149 FQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGS 1208
F+ H DP P + ++ R+PA+ +T + + N R +S P +
Sbjct: 1502 FKDHYQDP----VPGVTPASSRT--RTPASVNATPA-------NINIADLTRAVNSLPRN 1548
Query: 1209 RTGR--NDYRNGGGRDGHPSGLP 1229
T + N G+ +P+ P
Sbjct: 1549 MTSQMFNAIAAVTGQGQNPNTTP 1571
>gi|21539661|ref|NP_660094.1| transcription elongation factor SPT6 [Danio rerio]
gi|82135764|sp|Q8UVK2.1|SPT6H_DANRE RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Protein pandora
gi|18479031|gb|AAL73392.1|AF421378_1 Spt6 [Danio rerio]
Length = 1726
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 376/1343 (27%), Positives = 630/1343 (46%), Gaps = 185/1343 (13%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRD------DIM 64
+A+ P + + + +E+ WIY S T + Q G + SR I
Sbjct: 290 RAIPVKPAEDDELEEEAEWIYRNAFS-TPTISMQESTDYLDRGTTTNFSRKGPSTIAKIK 348
Query: 65 RFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + Q ++PFIA YRKE + E+N ++ LW +
Sbjct: 349 EALNFMRNQHFEVPFIAFYRKEYV--------EPELNIND---------------LWKVW 385
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER-- 182
D+KW L+ RK L +++ + +I + ++ L DS ++ L+ A+ ER
Sbjct: 386 QWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADP----DKPLADS-TRPLDTADMERLK 440
Query: 183 ------EVDDVDLKFNLHF-------------------PPGEVGVDEGQ----------- 206
E+ DV F L++ EV ++G+
Sbjct: 441 DVQSIDELGDVYNHFLLYYGRDIPKMQNAAKGGKKKLKKIKEVSEEDGEEAEVEEEEEEE 500
Query: 207 ------YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEE 260
K+ R YS C AGL +A KFG + EQ G L E E P E
Sbjct: 501 EQKGPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLE 560
Query: 261 MASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAI 320
+A ++ C+ FN+ +AVL+GAR+M A++I+ EP VR +R F + A ++ PT G +
Sbjct: 561 LAKDYVCSQFNTPEAVLEGARYMVAMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKDV 620
Query: 321 DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL-----NKLFSDC 375
D H K+L+ KP+++ Q+L + AEEE LL + I + + F +
Sbjct: 621 DEAHFAYSFKYLKNKPVKELSGDQFLKMCLAEEEGLLAIDICIDLVGVKGYGDQTYFDEI 680
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
K+ Y D S Q WN QR L ++ +L FL P M KE ++ + AK ++ K L
Sbjct: 681 KQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNKLIAEAKDNIVKSCCKKL 740
Query: 436 WNKVSVGPYQRKDNDITPDEE-------AAPRVLACCWGPGKPETTFV-MLDSSGEVVDV 487
+N + V PY R D + D++ RVL + G+ F +++ GEVVD
Sbjct: 741 YNWLKVAPY-RPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDTPVFCSLINGEGEVVDF 799
Query: 488 LFTGCLTLRSQNVR--DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
L R R +++ K+ D E L KF++ +PHVV + N + +DI I
Sbjct: 800 LRLPYFLKRRNAWREDEREKKQQDVENLKKFLLSKKPHVVAVSGENRDAHMVMEDIKRTI 859
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
++ + V + + D L LY NS+ S +++AV++ R +Q+
Sbjct: 860 SELEQNSSLPV------VGVELVDNELAVLYMNSKKSEADFRDYPPLLRQAVSVARKIQD 913
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PL A +C +IL KL PL+ + +E + ++ N+VG+D+N AI +
Sbjct: 914 PLVEFAQVCSTDDDILCLKLHPLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYT 973
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
+ +Q+I GLGPRK + L + L + + R VT +G KVF+N GF+++ +
Sbjct: 974 QSLVQYICGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASL 1033
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL 784
S+ +I++LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+
Sbjct: 1034 GDSTDSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPER 1089
Query: 785 LKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE 841
LK LD +E +R+ NK TLY IR EL ++D R Y+ P+ +E F M++ ET
Sbjct: 1090 LKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKETP 1149
Query: 842 DTLAEGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE- 887
+T G+++ V RR QG+ +AI E+GL ++++ S+ W +
Sbjct: 1150 ETFYIGKLITCVVTNIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDS 1209
Query: 888 --------------------------LSDK--------LHEGDILTCKIKSIQKNRYQVF 913
LSDK + G + C+I I ++ V
Sbjct: 1210 GSCPGQAIGVRTRLDNAVMGFIPTKFLSDKVVKHPEERVKPGMTVHCRIMKIDIEKFNVD 1269
Query: 914 LVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCF 971
L CR S++ +NN ++ + D YY + + +QE+ +K+K+ + K R+I HP F
Sbjct: 1270 LTCRTSDLSDKNNEWKLPK--DTYYDFDAETDDVKQEEEQKKKQQRTTYIK-RVIAHPSF 1326
Query: 972 QNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKS 1031
N+ +A K++ + + G+ +IRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 1327 HNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENA---- 1382
Query: 1032 LVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIE 1088
+G TL I + FEDLDE+ RY+ P+ + + +L ++ F + G + +++ELL
Sbjct: 1383 -FSLGHTLWINTEEFEDLDEITARYVQPMAAFARDLLGHKYFHECNGGDRKKMEELLVRT 1441
Query: 1089 KAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAY 1148
K E PT I Y + PG F+L Y P EY+ + P GF++R ++F ++ L +
Sbjct: 1442 KKEKPTFIPYYISACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRW 1501
Query: 1149 FQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGS 1208
F+ H DP P + ++ R+PA+ +T + + N R +S P +
Sbjct: 1502 FKDHYQDP----VPGVTPASSRT--RTPASVNATPA-------NINIADLTRAVNSLPRN 1548
Query: 1209 RTGR--NDYRNGGGRDGHPSGLP 1229
T + N G+ +P+ P
Sbjct: 1549 MTSQMFNAIAAVTGQGQNPNTTP 1571
>gi|332031106|gb|EGI70683.1| Transcription elongation factor SPT6 [Acromyrmex echinatior]
Length = 1761
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 342/1259 (27%), Positives = 597/1259 (47%), Gaps = 167/1259 (13%)
Query: 26 ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLS----ISRDDIMRFLDLLHLQKLDIPFIA 81
E+ WIY Q P + A E + + + I + LD + Q ++PFI+
Sbjct: 313 EAEWIYKQAFCK--PTVSIQDAHLNAEAKERARKGPQTIGKIKKALDFMRNQHFEVPFIS 370
Query: 82 MYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQ 141
YRKE L L +N+ LW ++ D KW L +RK L
Sbjct: 371 FYRKEYVLPELN------IND-----------------LWKVYKFDAKWCQLSQRKENLL 407
Query: 142 SYYKK--RYEEESRRIYDETRLALNQQLF-DSISKSLEAAETEREVDDVDLKFNLHFPPG 198
+ K Y+ + + L N ++ D + L+ +T E++DV F L++
Sbjct: 408 KLFDKMRNYQLDEIMKNPDAPLPDNVRVIKDDDIERLKNVQTSEELNDVYNHFMLYYSHE 467
Query: 199 EVGVDEGQYKRPK---------------------------------------------RS 213
+ E ++ K RS
Sbjct: 468 IQAMQESVRQKEKQARREERIQRRKQQIAEAEENGEDPPEEEEMPEEEEVDDTLKQAVRS 527
Query: 214 TKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSS 273
YS C KAGL +A KFG + E L E++ P +A+ + + F ++
Sbjct: 528 GPYSICRKAGLDGLAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTTIATEYSSSRFKTA 587
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR 333
+ VL+ A+ M A++++ EP VRK VR ++M+ A +S PT G ID H +K+L+
Sbjct: 588 EEVLKAAQLMVAIQLAREPLVRKCVREMYMERAKMSVKPTKKGIKEIDENHPIYTMKYLK 647
Query: 334 EKPLRKFEDAQWLLIQKAEEEKLLQVTIK--LPEDSLNKLFSDCKEHYLSDGVSKSAQLW 391
+KP+R Q+L + AEE+KL+ +T+ + ++ N + K+ Y D SK Q W
Sbjct: 648 DKPVRDLVGVQFLNLMIAEEDKLITITLSDTIEGNTSNNYVDEMKQLYCRDEFSKLVQDW 707
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
N R ++ AL+ ++P + KE R+ + AK ++ + ++N + V PY + +
Sbjct: 708 NALRVGSVEIALNRMVIPHLKKELRANLIAEAKECVMRSCCRKMYNWIKVAPYSCEFPEE 767
Query: 452 TP---DEEAAPRVLACCWGPGKPETTFV-MLDSSGEVVDVLFTGCLTLRSQNVRDQQS-- 505
D RV+ + P + F ++ + GE D L L R + R+ +
Sbjct: 768 EDEEWDTSKGLRVMGLSYVPDYSQAAFTCLIAADGECTDYLRLPHLMKRKNSYRESEKTL 827
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
K+ D L F+ +PHV+V+ + + DI E I + EE + + +
Sbjct: 828 KEADLLALKNFIATKKPHVIVVAGESREAMMIAADIKECITHLSEE------EQFPNIQV 881
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
D L ++Y NS + + +++A++L R +Q+PL + LC EIL K
Sbjct: 882 EICDNELAKIYANSNKGNSEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKY 941
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
L++ L +E + V+ N+VG+D+N A+ + + +QF+ GLGPRK +L +
Sbjct: 942 HNLQDQLPKEELLENLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIK 1001
Query: 686 SLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
L + + R VTA +G KVF+N GF+++ + S+ ++++LD +R+HPE+
Sbjct: 1002 MLKQTNQRLENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPET 1061
Query: 745 YGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDRHIKEKKRE--- 800
Y A+++A ++ DDEDA A+E + + P+ LK LD +E +R+
Sbjct: 1062 YEWARKMA-------VDALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFG 1114
Query: 801 NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----R 855
NK TLY IR EL ++D R Y+ S ++ F +++ ET +T G++V ATV R
Sbjct: 1115 NKCVTLYDIRAELNSRYKDLRVLYQSSSAEKLFDVLTKETPETFYVGKLVLATVVGISHR 1174
Query: 856 RVQG-----------------QRAICV-----------------------------LESG 869
+ QG Q C+ L++G
Sbjct: 1175 KPQGDQLDQANPVRNEETGLWQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNG 1234
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
++G + ++ S D + +++ G I+ C+I I+ +R+ V + S++ + ++
Sbjct: 1235 ISGYIHIKNLS-DRHVANPCERVGMGQIIHCRIIKIEVDRFSVECTSKSSDLADKNHEWR 1293
Query: 930 QNLDPYYHEERSSRQSE-QEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEP 988
DP+Y E R + +E A+K K+ ++ + +R+IVHP F N++ E +KL+ +
Sbjct: 1294 PQRDPFYDTESEQRDIKVEEDAKKAKQ--RQIYVKRVIVHPSFHNISFAETVKLMQTMKQ 1351
Query: 989 GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFED 1048
GE+I+RPSS+G +LT+T KV D + H D+ E GK+ + +G++L IG + FED
Sbjct: 1352 GEAIVRPSSKGADHLTVTWKVTDDILQHIDVREEGKE-----NTFSLGQSLWIGNEEFED 1406
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRKFR---KGSKAEVDELLRIEKAEFPTRIVYGFGISHE 1105
LDE++ R+++P+ ++ +L ++ ++ +G K + +E+L+ +K E P I Y +
Sbjct: 1407 LDEIIARHVNPMAAYASELLDFKYYKSTVEGIKDKAEEILKEQKKENPNGIPYIISAAKT 1466
Query: 1106 HPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP-QGDSAPS 1163
+PG F+L+Y+ T HEY+ + +GF+FR +MF + L+ +F+ H DP G S PS
Sbjct: 1467 YPGKFLLSYLPRTRCRHEYVTVTSEGFRFRAQMFGRVSDLLRWFKEHFRDPVPGQSTPS 1525
>gi|403280092|ref|XP_003931570.1| PREDICTED: transcription elongation factor SPT6 [Saimiri boliviensis
boliviensis]
Length = 1709
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 356/1275 (27%), Positives = 591/1275 (46%), Gaps = 188/1275 (14%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N G + + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGEN-----------------------SYGSDWESQRLN 866
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
E PR E ++ ++ +++AV+L R +Q+PL A +C +IL K
Sbjct: 867 CSQEKDPREAEKIILNQNEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 926
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 927 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 986
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 987 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1046
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1047 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1102
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1103 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1162
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1163 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1222
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1223 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1280
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1281 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1339
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1340 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1394
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1395 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1454
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1455 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1513
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1514 ----RTPASINATPA 1524
>gi|281200294|gb|EFA74515.1| SH2 domain-containing protein [Polysphondylium pallidum PN500]
Length = 1604
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 341/1184 (28%), Positives = 572/1184 (48%), Gaps = 132/1184 (11%)
Query: 9 LRKALAGPPTDGE-SIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LRK G P GE +E+ WIY A KE DL + + I L
Sbjct: 281 LRK---GTPYAGERQTYEEAEWIY-------------ESAFDNKEAKDLRMI-ETISTIL 323
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
L++PF+ Y+K D FE TL+ LW I DLD
Sbjct: 324 KFFQRDMLEVPFVYTYKK--------------------DVFEPM-TLQ---DLWTIFDLD 359
Query: 128 KKWLLLQKRKSALQSYYK-----KRYEEESRRIYDETRLALNQQLFDSIS-------KSL 175
+KW + K +L+S+ ++Y++ R E +A LF I+ KS
Sbjct: 360 EKWNHMMTSKKSLESFIAANPNLEQYQQSLRECKSEEGIADLYDLFQMINGPEGFRVKST 419
Query: 176 EAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSS 235
T VDD + N + KR + Y+ SKAGL + +G S+
Sbjct: 420 TTTTTTTVVDDENNNNNTAA--TTAIASTPKLKRAIKRDLYTVYSKAGLTKFLPYYGISA 477
Query: 236 EQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR 295
++ G+ L M D + P A C + +VL+ AR++ A +I +P VR
Sbjct: 478 QEFGINLMDNYMSHVPNDHFDDPSSCAMKHICVECGNIDSVLRAARYLMAHDIGFDPNVR 537
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEK 355
+ +R I+ A ++T PT G ID+FH + VK +REKP F+D Q+LLI KAE E
Sbjct: 538 QSIRMIYRKYAYLTTTPTAVGQKEIDAFHPYITVKSIREKPCHIFDDTQYLLILKAEREG 597
Query: 356 LLQVTIKLPEDSL-NKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
++ +I +PE N + + + YLS G S +AQ WN +R+ I++D L+ FL P KE
Sbjct: 598 FVKTSIGIPEHVHDNVIIPEMEALYLSSGTSSNAQQWNAERKQIIRDTLNMFLYPVFEKE 657
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPR---VLACCWGPGKP 471
R+ + A + + E L K+ V P+Q + +EE + +++ CWG K
Sbjct: 658 LRNKLLTEASNRVAFECAMKLEEKLRVAPWQPNQQNDDDEEEDEAKTFNIMSFCWGSEKV 717
Query: 472 ETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN 531
T +L+S E++ L R + + K++D +L + D++P ++++ A
Sbjct: 718 PTMCAVLNSDSELLTQTKMDFLCDRVGDSTLKNKKQDDVSKLTNLLTDYKPRLILISATE 777
Query: 532 LSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKG 591
+ L D+I + + ++ + + E I + + +NS+ ++ P
Sbjct: 778 MESKRLFDEIRDHVTRLHSDGVLKLSTE-----IYFASPEIGLSLQNSQRYFEEFPEFPS 832
Query: 592 NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ 651
+K AVA+ R +PL+ + LC +E+L KL PL+ + D ++ + ++V N
Sbjct: 833 VLKHAVAVARCALDPLSEYSNLCTDNKEVLYLKLHPLQEMIGKDYLLKLLYRCFINVVNA 892
Query: 652 VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFV 711
VG+DIN + ++ +PLQF+SGLG RKA +L ++ R G
Sbjct: 893 VGVDINKYVKNKFAASPLQFVSGLGSRKAQALLNAVFRKG-------------------- 932
Query: 712 NAVGFLRVRRSGQAASSSQFIDL--LDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED 769
G++ R+S + +SQ +++ LDDTRIHP+ Y A ++A + +R ++ D + +ED
Sbjct: 933 ---GYVSSRQSIEKILTSQDVNINPLDDTRIHPDDYLSAYKIAADALDRTVDQD-SLNED 988
Query: 770 ALEMAIEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKE 826
+ + V + P L++ LD ++ ++ K++ LY I+ EL F D RN ++
Sbjct: 989 VMNDCVFEVMNDPKKLESIDLDAFAELLEIRQNTQKKKLLYAIKNELTSPFADIRNYFQP 1048
Query: 827 PSQDEEFYMISGETEDTLAEGRVVQATV-RRVQGQRAICVLESGLAGMLMKEDYSDDWRD 885
PS + F ++GET+ TL G +V T + + G + C LE+GL G + E S +
Sbjct: 1049 PSPSQIFSWLTGETDQTLRIGTLVSVTTYKNLDGVK--CRLENGLEGTIPTECIS----E 1102
Query: 886 SELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERS---- 941
+ L G L C+I SI+K R+ V L C+ S++ +++ + Y+ E +
Sbjct: 1103 TNDVKSLPRGQTLNCRILSIEKERFHVTLSCKPSDLAAEKWEDIIYNELKYNGENTYLIL 1162
Query: 942 -------------SRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEP 988
RQS +K +K+K R +VHP + + T EA L +
Sbjct: 1163 GEAPKAPIAANTKKRQSVPQKIKKQK---------RTVVHPLWHSFTWSEAENHLKDRPV 1213
Query: 989 GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFED 1048
GE+++RPSSRG ++T+T K D V H DI E KD + V +G + IGE ++
Sbjct: 1214 GEALLRPSSRGFDHITVTFKFSDNVIIHHDIKE-----KDKPNPVSLGLSFYIGEAKYDS 1268
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG 1108
LDE++ R+++ +++++ + ++ +R G+K+EV+E LR +K FP I Y F I E PG
Sbjct: 1269 LDEILGRHVEYIINNVNNLKEHKYYRSGTKSEVEEKLRKDKQRFPKSIPYAFAICEEKPG 1328
Query: 1109 TFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRH 1152
L ++ + NP +EY+ + G++ R + F +D L+ YF+++
Sbjct: 1329 YVYLYHVPNQNPRYEYVLVKEDGYEIRGKTFGTVDELIHYFKKN 1372
>gi|358339285|dbj|GAA47377.1| transcription elongation factor SPT6, partial [Clonorchis sinensis]
Length = 1696
Score = 454 bits (1169), Expect = e-124, Method: Compositional matrix adjust.
Identities = 349/1264 (27%), Positives = 595/1264 (47%), Gaps = 192/1264 (15%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
DE+ WIY + L + + PK I+ L L+ ++PFIA YR
Sbjct: 343 DEANWIYRKAFKEEPEL--KPPSVIPK-----------ILETLKLMRESLFEVPFIAFYR 389
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYY 144
KE C V D N K LW I+ LD+KW +L +RK + +
Sbjct: 390 KE-C-----------VERDLNI-----------KDLWRIYQLDEKWTILNQRKRNMIQLF 426
Query: 145 KKRYEEESRRIYDETRLALNQQLFDSISKSL---EAAETEREVDDVDLKFNLHFP----P 197
+K ++ D+ ++ ++ +S+ K + +AE+ E+ DV L + LH+ P
Sbjct: 427 QKLHDFFEATSPDDPG-SVQKKHANSVLKLISCARSAESLEELIDVRLNYLLHYSSFTEP 485
Query: 198 GE----------------VGVDEGQ--------------------------YKRPKRST- 214
+ V VDE + +R R+T
Sbjct: 486 MQRWFKRKQEKDEAKKDGVEVDENEEESYLPEQGNAVPLTFSFDPLTGRQIRQRQARATA 545
Query: 215 KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQ 274
Y +A L + +FG S+ Q + + + +++ P + A +F F ++
Sbjct: 546 SYEVAKRAALGGLVQRFGLSAAQFAENVQDQYLRHDVDQCPMLPLDAAGDFLSPQFPTAN 605
Query: 275 AVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLRE 334
L AR+M A EIS EP VR+ +R +F AV+S PTP G ID H +K+L+
Sbjct: 606 VALSAARYMLAFEISREPFVRRMMRQMFQSQAVISVRPTPRGVKEIDESHPLISIKYLKN 665
Query: 335 KPLRKFEDAQWLL-IQKAEEEKLLQVTIKLPEDSLN--KLFSDCKEHYLSDGVSKSAQLW 391
KP+ + L + A EKLL I LP + + L + + + D S Q W
Sbjct: 666 KPVSDLMGSVLFLHLHNASLEKLLTYEIHLPSEHIRGLSLLDELQRFFHQDEFSSLVQAW 725
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
N++R L+LK A + F+ P +++E + M ++ +L K L+N + V PY +
Sbjct: 726 NEERSLVLKQAAEEFIFPVLIRELKDKMLEASQQAVLRMCAKRLFNYLQVAPYPPDGHSG 785
Query: 452 TPDEEAAPRVLACCWGPG---------------KPETTFVMLDSSGEVVDVLFTGCLTLR 496
++ V W G + + V LDS+GEVVD L L ++
Sbjct: 786 RGHGDSESHVSGAVWSKGARVLAMAIKDEDDARQSVVSAVYLDSNGEVVDFLHLHGL-MQ 844
Query: 497 SQNVRD--QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH-- 552
S V++ ++ K+ D +RL FM+ H+P V+V+G L++DI ++ ++ E
Sbjct: 845 SNRVQEDFKKLKEKDMQRLSGFMVKHRPQVIVIGCDCRRALYLQEDIQRLVDELASERRL 904
Query: 553 PRDVGHEMD-ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
PR M+ ELSIV+ ++SR S+D +++A++LGR LQ+PLA +
Sbjct: 905 PRIHVELMETELSIVFA--------QSSRASADLPVSYSPLLRQAISLGRRLQDPLAEFS 956
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
L EIL + PL++ L ++ +E ++ N+VG+D+N + LQF
Sbjct: 957 QLVNTEEEILGVRWHPLQDSLPREKLLEALEIEFINRVNEVGVDVNRCLSHPHTAGVLQF 1016
Query: 672 ISGLGPRKAASLQRSLVRAGAIFT-RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
+SGLGPRK+ + + L T R VT G +V +N+ GF+++ + +
Sbjct: 1017 VSGLGPRKSLHMLKILRHRKMFLTNRMQLVTVIKFGPRVVINSAGFIKIDTAAVRDLDAD 1076
Query: 731 FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
+++LD TR+HPESY LA+++A + +E + N++ D A+E + P L+ L
Sbjct: 1077 DVEILDSTRVHPESYDLAKKMAVDA----LEYEDNEECDP-TTALEEIVQSPARLRELDL 1131
Query: 791 DRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
D +E KR+ +K TLY IR+EL + ++D+R Y+ + + F M++ ET +T G
Sbjct: 1132 DAFAEELKRQDHGDKHITLYDIRKELNNRYRDYRAPYQSANPEMIFSMVTHETPETFHVG 1191
Query: 848 RVVQATVRRVQGQRA-------------------ICV----------------------- 865
R+++ V V +R +C
Sbjct: 1192 RLIECRVVAVATRRPRPEQLDNANPTKNETNGLWMCPFCRQDNFQFLNNVWSHFDNNECP 1251
Query: 866 ---------LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVC 916
L++G+AG + D +L ++ G ++ C++ I ++ V L C
Sbjct: 1252 GQAVGLRVQLDNGIAGFIPLR--LTDPPAEKLFERAQPGTLIRCRVMKIDITKFNVELTC 1309
Query: 917 RESEMRNNRYQHCQNLDPYYHEERSSRQ--SEQEKARKEKELAKKHFKERLIVHPCFQNV 974
++S++++ R+ DP+Y E + +E+ K KE A + R+I HP ++N+
Sbjct: 1310 KQSDLQDERHMWRPRPDPFYDYEADEQDVLAEETAKAKVKENATPYLS-RVIFHPYYKNI 1368
Query: 975 TADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG 1034
+ D+ + + EPG +IRPS RG +LT++ KV DG H D++E K +
Sbjct: 1369 SYDQLLAMEPELEPGSIVIRPSRRGADHLTVSWKVDDGTLQHIDVLEKEKTNS-----FS 1423
Query: 1035 IGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAE 1091
+G+ L IG++ FEDLDE+V R++ P+ S ++ +++YR +R G +A + LL EK+
Sbjct: 1424 LGRLLIIGDEEFEDLDEIVARHVQPMASLVRDIMTYRYYRDSRGGDRAVLGALLLQEKSN 1483
Query: 1092 FPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQR 1151
P RI Y + + PG F+L Y+ + PH E + P+GF+FR+ +F ++DR++ +F+
Sbjct: 1484 NPDRIPYFLSSTKDRPGYFLLAYMPNRTPHFELFSVRPEGFRFRRLIFPNLDRMITWFKE 1543
Query: 1152 HIDD 1155
H +D
Sbjct: 1544 HYND 1547
>gi|307188181|gb|EFN73013.1| Transcription elongation factor SPT6 [Camponotus floridanus]
Length = 1763
Score = 454 bits (1169), Expect = e-124, Method: Compositional matrix adjust.
Identities = 345/1282 (26%), Positives = 607/1282 (47%), Gaps = 169/1282 (13%)
Query: 26 ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLS----ISRDDIMRFLDLLHLQKLDIPFIA 81
E+ WIY Q P + A E + + + I + LD + Q ++PFI+
Sbjct: 314 EAEWIYKQAFCK--PTISIQDAHLNAEAKERARKGPQTIGKIKKALDFMRNQHFEVPFIS 371
Query: 82 MYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQ 141
YRKE L L +N+ LW ++ D KW L++RK L
Sbjct: 372 FYRKEYVLPELN------IND-----------------LWKVYKFDAKWCQLRQRKENLL 408
Query: 142 SYYKK--RYEEESRRIYDETRLALNQQLF-DSISKSLEAAETEREVDDVDLKFNLHFPPG 198
++K Y+ + + L N +L D + L+ +T E+ DV F L++
Sbjct: 409 KLFEKMRNYQLDEIMKNPDAPLPDNIRLIKDDDIERLKNVQTSEELSDVYHHFMLYYSHQ 468
Query: 199 EVGVDEGQYKRPK---------------------------------------------RS 213
+ E ++ K RS
Sbjct: 469 ISAMQEAVRQKEKEARREERIQRRKQQIAEAEENGEDPPEEEEAQEEEEADDTLKQAVRS 528
Query: 214 TKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSS 273
YS C KAGL +A KFG + E L E++ P +A+ + + F ++
Sbjct: 529 GPYSICRKAGLDGLAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTTIANEYCSSRFKTA 588
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR 333
+ +L+ ++ M A++++ EP VRK VR ++M+ A +S PT G ID H +K+L+
Sbjct: 589 EEILKASQLMVAIQLAREPLVRKCVREMYMERAKISVKPTKKGIKEIDENHPIYTMKYLK 648
Query: 334 EKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSDGVSKSAQLW 391
+KP+R Q+L + AE++KL+ +T+ + ++ + + K+ Y D SK Q W
Sbjct: 649 DKPVRDLVGVQFLNLVIAEDDKLITITLSDSIEGNTSSNYVDEMKQLYCRDEFSKLVQDW 708
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY---QRKD 448
N R ++ AL+ ++P + KE R+ + AK ++ + ++N + V PY ++
Sbjct: 709 NALRVGSVELALNRMVIPHLKKELRTNLIAEAKECVMRACCRKMYNWIKVAPYICEFPEE 768
Query: 449 NDITPDEEAAPRVLACCWGPGKPETTFVMLDSS-GEVVDVLFTGCLTLRSQNVRDQQS-- 505
D D RV+ + P + F L ++ GE D L L R + R+ +
Sbjct: 769 EDEEWDTSKGLRVMGLAYVPDYSQAAFTCLVAADGECTDYLRLAHLMKRKNSYREDEKAM 828
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
K+ D L F+ +PHV+V+ + + DDI E I + E + + +
Sbjct: 829 KEADLLALKNFIATKKPHVIVIAGESREANMIADDIRECITNLTGE------EQFPSIQV 882
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
D L ++Y NS + +++A++L R +Q+PL + LC EIL +
Sbjct: 883 EIYDNELAKIYSNSNKGVSEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLRY 942
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
L++ L +E + V+ N+VG+D+N A+ + + +QF+ GLGPRK +L +
Sbjct: 943 HSLQDQLPKEELLENLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIK 1002
Query: 686 SLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
L + + R VTA +G KVF+N GF+++ + S+ ++++LD +R+HPE+
Sbjct: 1003 MLKQTNQRLENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPET 1062
Query: 745 YGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDRHIKEKKRE--- 800
Y A+++A ++ DDEDA A+E + + P+ LK LD +E +R+
Sbjct: 1063 YEWARKMA-------VDALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFG 1115
Query: 801 NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----R 855
NK TLY IR EL ++D R Y+ P+ ++ F +++ ET +T G++V ATV R
Sbjct: 1116 NKCVTLYDIRAELNSRYKDLRVPYQSPNAEKLFDVLTKETPETFYVGKLVLATVVGISHR 1175
Query: 856 RVQG-----------------QRAICV-----------------------------LESG 869
+ QG Q C+ L++G
Sbjct: 1176 KPQGDQLDQANPVRNEETCLWQCPFCLKNDFPELSEVWNHFDAGACPGKAVGVRLRLDNG 1235
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
++G + ++ S D + +++ G I+ C+I I+ +R+ V + S++ + ++
Sbjct: 1236 ISGYIHIKNLS-DRHVANPCERVGMGQIIHCRIIKIEVDRFSVECTSKSSDLADKNHEWR 1294
Query: 930 QNLDPYYHEERSSRQSE-QEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEP 988
DP+Y E + + +E A+K K+ ++ + +R+IVHP F N++ E +KL+ +
Sbjct: 1295 PQRDPFYDTETEQKDMKVEEDAKKAKQ--RQIYVKRVIVHPSFHNISFAETVKLMQTMKQ 1352
Query: 989 GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFED 1048
GE+I+RPSS+G +LT+T KV D + H D+ E GK+ + +G++L IG + FED
Sbjct: 1353 GEAIVRPSSKGADHLTVTWKVTDDILQHIDVREEGKE-----NAFSLGQSLWIGNEEFED 1407
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRKFR---KGSKAEVDELLRIEKAEFPTRIVYGFGISHE 1105
LDE++ R+++P+ ++ +L ++ ++ +G K + +E+L+ +K E P I Y +
Sbjct: 1408 LDEIIARHVNPMAAYASELLDFKYYKPSVEGIKDKAEEILKEQKKENPGGIPYIISAART 1467
Query: 1106 HPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP-QGDSAPSI 1164
+PG F+L+Y+ T HEY+ + +GFKFR +MF + L+ +F+ H DP G S PS
Sbjct: 1468 YPGKFLLSYLPRTRCRHEYVTVTSEGFKFRGQMFGRVSDLLRWFKEHFRDPVPGQSTPST 1527
Query: 1165 RSVAAMVPMRSPANGGSTASAG 1186
A + R+P A +G
Sbjct: 1528 PRGA--MTSRTPYTTTPGAVSG 1547
>gi|380026998|ref|XP_003697224.1| PREDICTED: transcription elongation factor SPT6-like [Apis florea]
Length = 1743
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 341/1262 (27%), Positives = 603/1262 (47%), Gaps = 127/1262 (10%)
Query: 26 ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLS----ISRDDIMRFLDLLHLQKLDIPFIA 81
E+ WIY Q P + A +E + + + + I + LD + Q ++PFI+
Sbjct: 308 EAEWIYKQAFCQ--PTISIQDAHLNEEAKERARKGPQTVNKIKKALDFMRNQNFEVPFIS 365
Query: 82 MYRKEECL--------------------------SLLKDLEQNEVNNDNNDDFERTPTLK 115
YRKE L +LLK E+ + N D+ + P
Sbjct: 366 FYRKEYVLPELNINDLWKIYKFDMKWCQLKQRKENLLKLFEK--MRNFQLDEIMKNPDAP 423
Query: 116 WHKVLWAIHDLDKKWLLLQKRKSALQSYYKK---RYEEESRRIYDETRLALNQQLFDSIS 172
+ I D D + L + L Y+ Y E+ + ++ R + +
Sbjct: 424 LSDNIRIIKDDDIERLKNVQTFEELNDIYRHFMLYYNEDVSVMQEDIRKKEKEAQKKAKL 483
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
+ + E E + DL + E + K+P R Y C KA L +A +FG
Sbjct: 484 EKRKQQIEEAEENGEDLPEEIADVEDEEEEIDESLKKPIRKGPYYICKKACLDGLAKRFG 543
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
S E L E++ P +A++F A+FN+++ VL+ A+ M A++++ EP
Sbjct: 544 LSPEHFAENLRDNYQRHEVDQDPTEPAIVANDFCSAIFNTNEEVLKAAQLMVAIQLAHEP 603
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAE 352
VRK VR ++M+ A +S PT G ID H G+K+L+ KP+R Q+L + AE
Sbjct: 604 LVRKCVREMYMERAKLSIKPTKKGIKEIDEAHAIYGLKYLKNKPVRDLVGDQFLKLIIAE 663
Query: 353 EEKLLQVTIK--LPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPS 410
E+KL+ ++ + ++ N + K+ Y D SKS Q WN R ++ AL+ ++P
Sbjct: 664 EDKLITLSFSDIIEGNTSNNYIDEIKQLYYRDEFSKSVQDWNTLRTGSVEIALNRIIIPQ 723
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ---RKDNDITPDEEAAPRVLACCWG 467
+ KE RS + AK ++ + ++N + + PY +++D + RV+ +
Sbjct: 724 LKKELRSNLLIEAKECVMKACCRKMYNWIKIAPYTCEFPEEDDEEWNTSKGIRVMGVAYV 783
Query: 468 PGKPETTFV-MLDSSGEVVDVLFTGCLTLRSQNVRDQQS--KKNDQERLLKFMMDHQPHV 524
P + F ++ GE D L + R + R+ + K+ D + F+ +PHV
Sbjct: 784 PDPSQAAFTCIISPDGECTDYLRLPHILKRKNSFRENEKVLKEADLLAIKNFIATKKPHV 843
Query: 525 VVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSD 584
VV+ + DI E I ++EE + + + D L ++Y NS S
Sbjct: 844 VVVSGETREALMIVADIKECISNLIEE------EQYPTIQVEICDNELAKVYANSNRSIS 897
Query: 585 QLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQV 644
+ +++A++L R +Q+PL + LC EIL K L++ L+ ++ +
Sbjct: 898 EFRDYPELLRQAISLARRIQDPLLEFSQLCTIDEEILCLKYHSLQDQLSKEDLIENLYLE 957
Query: 645 MVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAH 703
++ N+VG+D+N A+ + + +QF+ GLGPRK +L + L + + R +TA
Sbjct: 958 FINRINEVGVDLNRAVQQPYTANLVQFVCGLGPRKGQALIKILKQTNQRLENRTQLITAC 1017
Query: 704 GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGD 763
+G KVFVN GF+++ + S+ ++++LD +R+HPE+Y A+++A ++
Sbjct: 1018 HMGPKVFVNCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMA-------VDAL 1070
Query: 764 LNDDEDALEM-AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQD 819
DDEDA A+E + + P+ LK LD +E +R+ NK TLY IR EL ++D
Sbjct: 1071 EYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNCRYKD 1130
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRVQGQR------------- 861
R Y+ P+ ++ F +++ ET +T G++V ATV R+ QG++
Sbjct: 1131 LRISYQSPNTEKLFDILTKETPETFYVGKLVLATVVGISHRKPQGEQLDQANPVRNDETG 1190
Query: 862 ----AICV-----------------------------LESGLAGMLMKEDYSDDWRDSEL 888
C+ L++G++G + ++ SD +
Sbjct: 1191 LWQCPFCLKNDFPELSEVWNHFDAGACPGKATGIRLRLDNGISGYIHVKNLSDK-HVANP 1249
Query: 889 SDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQE 948
+++ G ++ C++ I+ R+ V + S++ + ++ D YY E + + E
Sbjct: 1250 EERVRVGQVIHCRVIKIEVERFSVECTSKTSDLVDKNHEWRPQRDVYYDTEAEDKDIKIE 1309
Query: 949 KARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLK 1008
+ K+ + + + K R+I+HP F N+ E KL+ + GE+IIRPSS+G +LT+T K
Sbjct: 1310 EDTKKVQQRQTYVK-RVIIHPNFYNIGFAEVEKLMQTMKQGEAIIRPSSKGADHLTVTWK 1368
Query: 1009 VYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAML 1068
V D +Y H DI E GK++ +G++L IG + FEDLDE++ R+I+P+ +++ ++
Sbjct: 1369 VTDNIYQHIDIREEGKENT-----FSLGRSLWIGNEEFEDLDEIIARHINPMSAYVSELI 1423
Query: 1069 SYRKFR---KGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYI 1125
++ ++ +G K + +E+L+ +K + P I Y + +PG F+L+Y+ T HEYI
Sbjct: 1424 DFKYYKSNIEGIKDKAEEILKEQKKQNPGGIPYIVSAAKNYPGKFLLSYLPRTRCRHEYI 1483
Query: 1126 GLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP-QGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
+ P GF+FR +MF + L +F+ H DP G S P + + R+P NG +
Sbjct: 1484 TVSPDGFRFRGQMFSRLSDLFRWFKEHFRDPIPGQSTPG--TPHGAMTSRTPYNGTTPGV 1541
Query: 1185 AG 1186
G
Sbjct: 1542 NG 1543
>gi|391330657|ref|XP_003739771.1| PREDICTED: transcription elongation factor SPT6, partial [Metaseiulus
occidentalis]
Length = 1523
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 352/1265 (27%), Positives = 600/1265 (47%), Gaps = 176/1265 (13%)
Query: 36 SGTLPLFGQRG-AGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKD 94
SG PL G++ + PK + +RF+ H + +PFIA YRKE + D
Sbjct: 222 SGHQPLGGRKNRSAVPKIA--------EALRFMRNSHFE---VPFIAFYRKE---YVQPD 267
Query: 95 LEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRR 154
L N+ LW I+ D++W L+++K ++ +KK E +
Sbjct: 268 LTIND--------------------LWIIYKWDERWCQLRQQKQNMEKLFKKMQEYICEQ 307
Query: 155 IYDETRLALN-QQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQY------ 207
I ++ A + +Q+ ++ + L A++ E+ DV L F L++ + E
Sbjct: 308 ILNDDGAAEHLRQIEENDFERLRDAQSPEELKDVYLHFLLYYAQDLPAMQEANLQKRKKK 367
Query: 208 ---------------------------------------KRPKRSTKYSSCSKAGLWEVA 228
K+ +R ++ C + GL +A
Sbjct: 368 REEERVKRLERQRAAREAGGDGGLDEEEEMDEGEEELFLKKSRRKDGFAVCREMGLSALA 427
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEI 288
KFG + +Q G L E+ P E A+ + + VL GAR+M A EI
Sbjct: 428 KKFGLTPQQFGENLRDNYQRHEVVQFPVQPLEAAAEYVNERLKTPLEVLNGARYMVACEI 487
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLI 348
+ +P VR+ VR F + A + PT G ID H K+L+ KP+R + Q+L +
Sbjct: 488 ARDPTVRRCVRETFFERAKLCVAPTKKGSKEIDESHACYTFKYLKNKPVRSLQADQYLKL 547
Query: 349 QKAEEEKLLQVTIKLPEDSLNK---LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN 405
AEEEKLL+++I++ D + S+ ++ Y D SK+ Q WN QRE L AL
Sbjct: 548 SMAEEEKLLKISIRMDGDGCAENGTYASEVRQLYHRDEFSKNVQEWNSQREEALNHALTK 607
Query: 406 FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD---NDITPDEEAAPRVL 462
L P+ KE + + A +L K +N + V PY D + D R+
Sbjct: 608 MLYPTFEKELKLRLLREAYDNVLRSVSKKFYNWLKVAPYNPPDWIQEEEDFDTREGVRIF 667
Query: 463 ACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQ--SKKNDQERLLKFMMD 519
A + F +++ GEV D L + R R+ + +K +D +L KF+ +
Sbjct: 668 AIAYQNDWNVPAFGALINGDGEVTDYLRLENILKRKNAWRESERAAKISDLAKLKKFIAE 727
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
+PH VV+ A + S+K+D+ ++I ++ ++ + + ++ D L +Y NS
Sbjct: 728 KKPHCVVISAESREALSIKEDVEQVIKELGDD------DQFPAVQVMLLDCGLALVYANS 781
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
+ + + +K+AV+L R +Q+PL + LCGP EIL K PL++ + +E
Sbjct: 782 KRAEQEFREYPPLLKQAVSLARRMQDPLIEFSQLCGPDEEILCLKYHPLQDNVPKEEFQW 841
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKD 698
+ +++ TN+VG+DIN + + LQF+SGLGPRKA ++ ++L ++ + + +R
Sbjct: 842 ALALELINRTNEVGVDINRCMEQSHTSELLQFVSGLGPRKAHAMIKTLKQSHSKLDSRTS 901
Query: 699 FVTAHGLGKKVFVNAVGFLRVRR-SGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYN 757
VT LG KVF+N GF+R+ S ++S + ++LD +R+HPE Y A+++A +
Sbjct: 902 LVTTLKLGPKVFLNCAGFIRIESGSFLDNNTSAYAEMLDGSRVHPEMYEWARKMATDALE 961
Query: 758 RDIEGDLN-DDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRREL 813
D D N + DALE +E+ PD LK LD E +R+ NK TLY IR EL
Sbjct: 962 YDDNEDANLNPADALEEILEN----PDKLKDLDLDAFAVELERQGYGNKSITLYDIRAEL 1017
Query: 814 IHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRVQGQR------- 861
+ ++D R +Y P ++ F +++ ET +T G++V V ++ QG++
Sbjct: 1018 NNRYKDLRVEYVPPEREILFNLLTKETPETFFVGKLVTCQVSGIARKKPQGEQLDQANPI 1077
Query: 862 ----------AICV-----------------------------LESGLAGMLMKEDYSDD 882
C+ ++G+ G + ++ SD
Sbjct: 1078 RNDESGLWQCPFCLKNDFPELSEVWNHFDAGNCPGQAMGVKVRFDNGVNGFIPTKNLSDK 1137
Query: 883 WRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSS 942
R S +++ G I+ +I I +R+ V + + S++ + + D YY E +
Sbjct: 1138 -RVSNPEERVKIGQIVHGRITKIDISRFSVDVTTKSSDLADKNGEWKPPKDLYYDHE--A 1194
Query: 943 RQSEQEKARKEKELAKKH-FKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPS 1001
+ E++K +L ++ + +R+IVHP F NV+ EA+K+L +E GES+IRPSS+G
Sbjct: 1195 EEKERKKVNDVSKLKQRQTYVKRVIVHPSFHNVSFSEAVKILDRQEQGESVIRPSSKGVD 1254
Query: 1002 YLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLV 1061
+LT+T KV+ + H D+ E GK++ +G +L I + FE LDE++ Y+ P+
Sbjct: 1255 HLTVTWKVHKDILQHIDVQEKGKENS-----FSLGSSLVINGEEFECLDEILANYVQPMA 1309
Query: 1062 SHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRST 1118
+ ++++R F+ G K V+ L EK + P+RI Y + PG F+L+Y S+
Sbjct: 1310 GFARDLINFRYFQDFEGGKKELVERWLTEEKRKAPSRIPYCVTACAQFPGKFLLSYQPSS 1369
Query: 1119 NPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD--PQGDSAPSIRSV-----AAMV 1171
HE++ + P G+++R++MF ++ L +F+ H D PQ P +SV A
Sbjct: 1370 KCRHEFVSVTPNGYRYRQQMFHSVNALFRWFKEHFKDPIPQPAQTPGAQSVTLTAAAPTT 1429
Query: 1172 PMRSP 1176
P +P
Sbjct: 1430 PYLTP 1434
>gi|330842812|ref|XP_003293364.1| hypothetical protein DICPUDRAFT_41908 [Dictyostelium purpureum]
gi|325076316|gb|EGC30112.1| hypothetical protein DICPUDRAFT_41908 [Dictyostelium purpureum]
Length = 1127
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 338/1162 (29%), Positives = 573/1162 (49%), Gaps = 108/1162 (9%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E ++E+ WIY G+ S K + + I + L + +L+IPFI
Sbjct: 44 EETLEEAQWIYEAAFEGS-------NTNSEK-------AVEAIAQILKFIQQYQLEIPFI 89
Query: 81 AMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSAL 140
Y K D +E TL+ LW I DLD+KW ++ K L
Sbjct: 90 YTYEK--------------------DIYEPYFTLQ---DLWNIFDLDEKWAHIKVNKKNL 126
Query: 141 QSYYKK--------------RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
++ K R EE +YD Q+ ++I K++ + +
Sbjct: 127 EAMGKNNKTIESYEAVLKEGRSEESISDLYDLF------QMLNAIEKNINGSLGD----- 175
Query: 187 VDLKFNLHFPPGEVGVD-EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE 245
++ P + E + K+ + Y+ +KAGL + S FG S+ + G L
Sbjct: 176 ---GYDFLSPNNNTNANGEPKQKKAIKRDLYTIYTKAGLSKFLSNFGMSAREFGQNLMDN 232
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
++ +D P A C +S VLQ R+M A EI +P VR VR I+
Sbjct: 233 YTTNKPKDIATDPSSSALGHICIEADSKDRVLQATRYMMAQEIGYDPHVRYSVRMIYRKY 292
Query: 306 AVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE 365
A ++T PT G ID FH + VK ++EKP F+D+Q+LLI KAE+E ++ T+ + E
Sbjct: 293 AHITTAPTIKGFKEIDVFHPYFTVKSIQEKPAHLFDDSQYLLILKAEKEGFIKSTMAISE 352
Query: 366 DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
+ N + + + YLSDG S Q WN+QR+LI+++AL FL P + KE R+ + A
Sbjct: 353 KTHNSVIIPEMEALYLSDGTSSITQQWNEQRKLIIREALTKFLYPVLEKELRNKLLTEAS 412
Query: 425 SWLLMEYGKALWNKVSVGPYQ-RKDNDITPDEEAAP-RVLACCWGPGKPETTFVMLDSSG 482
+ + E K L K+ V P++ N T + P ++L+ CWG K T +L+S G
Sbjct: 413 NRVAFECAKKLEEKIRVAPWKPLTSNANTGHSNSLPFKILSLCWGAEKIPTMGAVLNSDG 472
Query: 483 EVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIY 542
EVV + + R ++ K+ D ++L +DHQP +V++ A + L +++
Sbjct: 473 EVVTHVKLDFICDRLGE-SLKEKKEKDIKKLEDICLDHQPRLVIVSASEMDSKRLFEEVK 531
Query: 543 EIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRY 602
+ + R + L Y E L +SR+ ++ ++ A+A+GR
Sbjct: 532 IHLERWCSGERRIIRKSC--LLNYYNSEIGLSLQTSSRM-EEEFKEYPPILRHAIAVGRC 588
Query: 603 LQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHR 662
+PL ++LC EIL KL PL++ + D ++ + ++V N VG+DIN I
Sbjct: 589 ALDPLTEYSSLCTDHNEILFLKLHPLQDMIGKDYLLKLLHRCFINVVNAVGVDINRMIQC 648
Query: 663 EWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRS 722
+ + LQF+SGLG RK+ + ++ R G T + + V+ N +GF+++R
Sbjct: 649 RFTSSTLQFVSGLGSRKSQMILNNIFRRGGYITSRAILGKLLNQDIVYKNCIGFIQIRER 708
Query: 723 GQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP 782
A S DLLDDTRIHP++Y ++ +A E ++ + D+ L+ IE + +P
Sbjct: 709 YTAEYKS---DLLDDTRIHPDNYPISYRIAAEALDKPL------DDRYLQSYIEDIMKKP 759
Query: 783 DLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGE 839
L LD ++ R+ L+ I++EL H F D R+ Y+EP+ ++ F ++GE
Sbjct: 760 KKLDRLDLDAFADILESHDGHPARKLLHFIKKELTHPFADIRHSYEEPTPEQIFEWLTGE 819
Query: 840 TEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILT 899
TE +L G +V T RV + C L++GL G + + SDD L G +
Sbjct: 820 TESSLRRGTLVTVTTIRVFDGQVKCRLDNGLEGSIPSDALSDDGSVKSLG----RGITIN 875
Query: 900 CKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSE----QEKA----R 951
C++ SI K + V L C+ S++ +R++ + + E + + Q++ +E A +
Sbjct: 876 CRVMSIDKGNFSVSLSCKPSDLSASRWE-----ETLFRELKENGQNQYLRLEETAPPEPQ 930
Query: 952 KEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYD 1011
K+K + ++ +R ++HP + + + EA LS K GE I+RPSS+G ++T T K +
Sbjct: 931 KKKVVRREKRPKRSVIHPLWHDFSCIEAENYLSDKPIGEVILRPSSKGFDHITATFKFGE 990
Query: 1012 GVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLS-Y 1070
+Y H DI E K + V +GK+ +G+ ++ LDE++ R+++ L+++L + S
Sbjct: 991 SIYLHHDIKEADKPNA-----VSLGKSFYMGDTKYDSLDEILARHVEYLINNLNEVKSNA 1045
Query: 1071 RKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPK 1130
++ G+++++D+++R EKA+ P I Y FG +EHPG L ++ S+ P HE I +
Sbjct: 1046 AHWKDGNRSDIDDIIRAEKAKHPKTIPYYFGYDYEHPGFLTLYHVPSSTPRHEPILVKAD 1105
Query: 1131 GFKFRKRMFEDIDRLVAYFQRH 1152
GF RK+++ L+ YF+R+
Sbjct: 1106 GFILRKKLYPSYFELIKYFKRN 1127
>gi|157114681|ref|XP_001652370.1| suppressor of ty [Aedes aegypti]
gi|108877189|gb|EAT41414.1| AAEL006956-PA [Aedes aegypti]
Length = 1779
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 374/1477 (25%), Positives = 666/1477 (45%), Gaps = 219/1477 (14%)
Query: 9 LRKALAGPPTDGES-IVDESTWIYNQLLS----GTLPLFGQRGAGS-PKEGHDLSISRDD 62
LR P +G + + DE+ WIY Q T + ++ + + PK
Sbjct: 299 LRDVPITPVAEGSNELEDEAEWIYKQAFCKPPVSTQETYTRKSSSAIPK----------- 347
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I + LD + Q L++PFIA YRKE + DL N+ LW
Sbjct: 348 IKQALDFMRNQHLEVPFIAFYRKE---YVQPDLNIND--------------------LWK 384
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAE 179
++ D KW L R++ L ++ + ++ + A+ ++ + D L +A+
Sbjct: 385 VYKYDAKWCQLTVRRNNLMKLFENMRNHQLDKVMENPDAAIPEEIRIMKDEDFDRLRSAQ 444
Query: 180 TEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKR--------------------------- 212
T E+ DV F L++ E+ + + KR +R
Sbjct: 445 TPEELRDVHNHFLLYYA-HEIPAMQEKMKRKERERIRQEKLEARRKALESTEEGVESIDM 503
Query: 213 --------------------STKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
S Y+ C K GL +A +FG + E+ E++
Sbjct: 504 ENLDIEEEPYAEEHVKLKVDSGPYAMCRKGGLSGLAKRFGLTPEKFAENARDSYQRHEVD 563
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
P ++A + F + + VL A+ M A +++ EP +RK VR + + A +S P
Sbjct: 564 QEACDPADIAKEYVNNRFTTVEDVLHAAKFMVARQLAKEPLLRKCVREFYYERAKLSVRP 623
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNK 370
T G ID HQ +K++++K +R Q+L + +E++LL VTI ++ + +
Sbjct: 624 TKKGMKEIDENHQCYPMKYIKDKHVRDLTADQFLKLHMGQEDQLLTVTISERIEGTTTSD 683
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
+ + K Y D +K+ Q WN R ++ A +LP + +E ++++ AK +L
Sbjct: 684 IIDEMKALYQKDEFAKNVQEWNTLRSECVELAFTKMILPDLRRELQAILLEEAKECVLKI 743
Query: 431 YGKALWNKVSVGP----YQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDS-SGEVV 485
+ L+N + V P ++ D+D + RV+ + P ++ F + + GE+
Sbjct: 744 CCRKLYNWIKVAPFSPAFEVDDDDYDWETSRGIRVMGVAYVPDYSQSAFAAITAPDGEIT 803
Query: 486 DVLFTGCLTLRSQNVRDQQS--KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYE 543
D L L R R+++ K+ D + + +F+ + +PHV+V+G + ++ D E
Sbjct: 804 DYLRIPHLMKRKNTFREEEKSLKEGDLQAITEFIRNKKPHVIVVGGESREALMVQKDFQE 863
Query: 544 IIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYL 603
+ +V+E + E+ + D L ++Y NS + +++A++L R +
Sbjct: 864 CVKTLVDE------DQFPEIQVEIMDNELAKIYANSNKGTADFREYPFVLRQAISLARRM 917
Query: 604 QNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
Q+PL + LC EIL + L+ L ++ + ++ TN+VG+DINL +
Sbjct: 918 QDPLVEFSQLCNADEEILCLRYHMLQEQLNKEDLLENLYLEFINRTNEVGVDINLTVQNS 977
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRS 722
+QFI GLGPRK +L + L + + R VTA +G KVF+N GF+++ +
Sbjct: 978 ITLNLVQFICGLGPRKGQALIKVLKQTNQRLENRTQLVTACHMGPKVFINCSGFIKIDTN 1037
Query: 723 GQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDR 781
S+ ++++LD +R+HPE+Y A+++A ++ DDEDA A+E + +
Sbjct: 1038 SLGDSTEAYVEVLDGSRVHPETYEWARKMA-------VDALEYDDEDANPAGALEEILES 1090
Query: 782 PDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISG 838
P+ LK LD E +R+ NK TLY IR EL ++D R Y+ + +E F ++
Sbjct: 1091 PERLKDLDLDAFAVELERQGFGNKSITLYDIRAELNSRYKDLRTPYRSCTAEELFDYLTK 1150
Query: 839 ETEDTLAEGRVVQATV-----RRVQG-----------------QRAICV----------- 865
ET ++L G+++ ATV R+ QG Q C+
Sbjct: 1151 ETPESLYVGKMMLATVAGISHRKPQGDQLDQANPVRNDETGLWQCPFCMQNEFPELSEVW 1210
Query: 866 ------------------LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
++GL G + ++ SD + +++ G + +I I
Sbjct: 1211 NHFDAGECPGQATGVRLRFDNGLTGFIHIKNISDKHVKNP-EERVQMGQTIHVRITKIDV 1269
Query: 908 NRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIV 967
R+ + + S++ + + DP Y +E R +++E K K+ ++ + +R+IV
Sbjct: 1270 ERFTLDCSSKSSDLADKNNEWRPRKDPNYDQEAEDRDNKKETDTK-KQKQRQQYIKRVIV 1328
Query: 968 HPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHK 1027
HP F N++ EA+KLL + GE I+RPSS+G +LT T KV +Y H D+ E GK+
Sbjct: 1329 HPSFHNISYAEALKLLDQLDQGEVIVRPSSKGADHLTATWKVTKDIYQHIDVREEGKE-- 1386
Query: 1028 DIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDEL 1084
++ +G++L IG + FEDLDE++ RYI+P+ ++ + +L+Y+ ++ G K + +E+
Sbjct: 1387 ---NVFSLGQSLWIGNEEFEDLDEIIARYINPMAAYARDLLNYKYYKDTDGGMKDKAEEI 1443
Query: 1085 LRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDR 1144
L+ EK + P +I Y ++ +PG F+L+Y+ T HEYI + P+G++FR + F+ ++
Sbjct: 1444 LKEEKKKNPNKIHYVVSVAKNYPGKFLLSYLPRTKFKHEYITITPEGYRFRSQNFDSVNS 1503
Query: 1145 LVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGS----------------------- 1181
L+ +F+ H DP + P+ + R+P S
Sbjct: 1504 LLKWFKEHFRDPIPMATPTSTPRGSSSTSRTPYTSASPKYSNDAITKLAQNMPTHMLNSL 1563
Query: 1182 --TASAGSGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGR 1239
S + + + G + +TP + +G+ Y + H S PR YG +
Sbjct: 1564 SQATSHTPRYDYTPGDFGSTSNYVTTPYTPSGQTPYMTPYQQTPHSSQTPR-YGSSTPSQ 1622
Query: 1240 GSNNS----------NRGNSSNSERQDSS-YDTPKWDSANKSGDDSWGNFPGAKAQNPAG 1288
SN S +R +++R SS ++ P S + + G + G+ Q
Sbjct: 1623 HSNGSFVHPGSVNMPHRSRGGHNDRSGSSPFNNPASVSPYSNESANMGRY-GSMQQEKRN 1681
Query: 1289 REAFPGGWGSSG-GGGSSGWGGASDGDNGGWGHSSGG 1324
E W S G GGG+ G + GG G S G
Sbjct: 1682 WEKATDSWMSKGRGGGNHNRDGGRNTPRGG-GQSGRG 1717
>gi|390344813|ref|XP_782276.3| PREDICTED: transcription elongation factor SPT6 [Strongylocentrotus
purpuratus]
Length = 1326
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 345/1167 (29%), Positives = 555/1167 (47%), Gaps = 140/1167 (11%)
Query: 221 KAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGA 280
+AGL A+KFG + EQ G L + E +++P E+A+++ + F + VLQ A
Sbjct: 64 RAGL---AAKFGLTPEQFGENLRDNYQRHDPEQHQDSPLEVATDYLSSKFKDEEGVLQAA 120
Query: 281 RHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF 340
R+M A++I+ +P VR+ VR + + A +S PT G ID H G K+L+ K ++
Sbjct: 121 RYMVALQIAHDPLVRQCVRQTYYERAKISVRPTKKGIKEIDESHPIFGSKYLKNKQVKDL 180
Query: 341 EDAQWLLIQKAEEEKLLQVTIKL-------PEDSLNKLFSDCKEHYLSDGVSKSAQLWND 393
Q+L + +AE++KL+ +T+ + + F + K+ Y D Q WN
Sbjct: 181 LQDQYLKLVQAEKDKLITMTMSIDMAQGTSTSYTSTTYFEEMKQLYYLDEFRTEVQAWNK 240
Query: 394 QRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
+R L+ AL + L P + KE ++ + AK ++ + ++N + V P+Q D +
Sbjct: 241 ERSGALEMALQSILYPQLAKELKTKLVAEAKEGIIKQCCTKMFNSLKVMPHQ-VDQPMEE 299
Query: 454 DEE--------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNV---R 501
DE+ RV+ + F MLDS GEV D L LR +N R
Sbjct: 300 DEDDYMDGNSRMGLRVMGFSFTSDMDNAAFCCMLDSEGEVTDFLRLPHF-LRRRNAFYQR 358
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
D+ K+ D E L F+ +PHV+ L + + TS+ DI I + E +M
Sbjct: 359 DRDLKQADVESLKNFISTQKPHVLALASEGKNTTSVLQDIKGCIEDLESE------QQMA 412
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREIL 621
+ + D ++ +Y+ S++ + ++ AV++ R LQ+PL + LC P +IL
Sbjct: 413 PIKVQLIDSNVAAVYQASKLVETEFRDYPPLLREAVSIARRLQDPLIEFSRLCNPDDDIL 472
Query: 622 SWKLCPLENFLTPDE-KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
KL P ++ ++ +E K M ++ + V N+VG+DIN AI + +QF+ GLGPRK
Sbjct: 473 CLKLHPQQDAVSQEELKEAMFQEFIYRV-NEVGVDINRAITHPHTASIVQFVCGLGPRKG 531
Query: 681 ASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRV-RRSGQAASSSQFIDLLDDT 738
SL R+L + + R VT LG KVF+N GFL++ S + +I++LD T
Sbjct: 532 NSLVRTLKQKNQRLDNRNQLVTHCQLGPKVFINCAGFLKIDTASAGDGADDTYIEVLDST 591
Query: 739 RIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKK 798
RIHPE+Y A+++A + D + DD + E A+E + + PD LK LD +E +
Sbjct: 592 RIHPETYEWARKMAVDALEYD---EAADDANPAE-ALEEILENPDKLKDLDLDAFAEELE 647
Query: 799 RE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVR 855
R+ N+ TLY IR EL ++D R + + +E F +++ ET +T G++V V
Sbjct: 648 RQGYGNRSITLYDIRAELNSRYKDLRTPFHPFTPEEAFSILTKETPETFYRGKMVTCKVT 707
Query: 856 RVQGQRA-------------------ICV------------------------------- 865
+ +R +C
Sbjct: 708 GIARRRPTREMLDDANPSKNDETGLWLCPFCQQDNFFELNEVWSHFDTGNCPGQAVGVKV 767
Query: 866 -LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN 924
L++G+ G + + SD + D++ G L +I I R+QV L + S++++
Sbjct: 768 RLDNGIMGFIHTKFLSDS-KVKNPEDRVKIGMTLHARIMKIDIERFQVDLTSKSSDLQDR 826
Query: 925 RYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLS 984
+ D YY E + ++++ K+K A + K R+IVHP FQN+T +A K++
Sbjct: 827 NGEWAPPRDTYYDYESAEMDKQKDEEVKKKAAASTYVK-RVIVHPSFQNITYKQAEKVMR 885
Query: 985 AKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED 1044
+ G+ IIRPSS+G +LT+T KV DGVY H D+ E GKD+ +G TLKIGE+
Sbjct: 886 ESDVGDVIIRPSSKGADHLTVTWKVEDGVYQHIDVQEEGKDND-----FSLGSTLKIGEE 940
Query: 1045 TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFG 1101
FEDLDE++ R+I P+ + ++ + S++ + GSK +++ L+ EK + P RI Y
Sbjct: 941 EFEDLDEIIARHIQPMAAFVRDVTSHKYYHAVEGGSKELMEKYLQTEKKKTPNRIPYFMC 1000
Query: 1102 ISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSA 1161
+ +PG F+L+Y + HEY+ + P G+KFR + F I+ L +F+ H DP
Sbjct: 1001 LCQNYPGKFLLSYQPRSKGRHEYVSITPDGYKFRGQTFTTINSLHRWFKVHFRDP----I 1056
Query: 1162 PSIRSVAAMVPMRSPANGGSTASAGSGW---------GGSTNEGGWNRDRS---STPGSR 1209
P + PM + S A G+ W G+T GG S TP
Sbjct: 1057 PGMNVTP--TPMSTHRTPMSVAHDGTPWQTGTPMIQKTGTTFTGGMYATPSVLQGTPRQT 1114
Query: 1210 TGRNDYRNGG------GRDGHPSGLPR----PYGGRGRGRG-------SNNSNRGNSSNS 1252
GR G G G+P P+ P GG +G + NR N
Sbjct: 1115 PGRQTPLTGAAAGSRYGYGGYPYTTPQNITTPVGGTPSYQGMRTPQTRTPQVNRTPQINP 1174
Query: 1253 ERQDSSYDTPKWDSANKSGD---DSWG 1276
R + TP+ +S SWG
Sbjct: 1175 ARTPTMGGTPQGTPQYQSRTTPRQSWG 1201
>gi|312382157|gb|EFR27710.1| hypothetical protein AND_05250 [Anopheles darlingi]
Length = 1857
Score = 448 bits (1152), Expect = e-122, Method: Compositional matrix adjust.
Identities = 311/1124 (27%), Positives = 549/1124 (48%), Gaps = 116/1124 (10%)
Query: 216 YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQA 275
Y+ C K GL + +FG + EQ + E+E + P ++A + F S++
Sbjct: 549 YAICRKRGLTGLTKRFGLTPEQYAENVRDSYQRHEVEQETKEPLDVAKEYLGTTFTSAEE 608
Query: 276 VLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREK 335
VLQG M A +++ EP RK +R +F + A ++ PT G ID H +K+L+EK
Sbjct: 609 VLQGGVFMVARQLAREPLFRKCIRELFFERAKLNVRPTKKGMKEIDETHPCFTMKYLKEK 668
Query: 336 PLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWND 393
P+R Q+L + A+E+KLL + I K+ ++ L + K Y D SK+ Q WN
Sbjct: 669 PVRDLTGDQYLKLHIAQEDKLLTIEIADKIEGNATGDLLEELKALYHRDEFSKNVQEWNR 728
Query: 394 QRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
R + AL+ ++P + +E +++ AK +L + L+N + V PY+ D
Sbjct: 729 VRAECVVLALNRMVIPDLKRELHNILLAEAKDAVLRVCCRKLYNWIKVAPYRPPVPDFDD 788
Query: 454 DE---EAAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVR--DQQSKK 507
E RV+ + P ++ F ++ GEV D L L + R ++Q K+
Sbjct: 789 YEWETTRGVRVMGVAYVPDYTQSAFGAIIAPDGEVTDYLRIPHLLKKKNAYREAEKQCKE 848
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
D + F+ +PHV+V+G + ++ D E + ++ EE + ++++
Sbjct: 849 ADLRTITNFIRSKKPHVIVIGGESKDALMVQQDFVECLKRLHEE------EQFPQVAVEI 902
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
D L ++Y NS + +++A++L R +Q+PL + LC EIL +
Sbjct: 903 VDNELAKVYANSVKGAGDFKEYPALLRQAISLARRVQDPLVEFSQLCNADEEILCLRYHS 962
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
L++ L +E I ++ TN+VG+D+NLA+ +QFI GLGPRK +L + L
Sbjct: 963 LQDQLPKEELLENIYLEFINRTNEVGVDVNLAVQNPLTANLVQFICGLGPRKGQALLKVL 1022
Query: 688 VRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
+ + R VT +G KVF+N GF+++ + S+ ++++LD +R+HPE+Y
Sbjct: 1023 KQTNQRLENRTQLVTTCHMGPKVFINCSGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYE 1082
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A ++ DDEDA A+E + + P+ LK LD E +R+ NK
Sbjct: 1083 WARKMA-------VDALEYDDEDANPAGALEEILEAPERLKDLDLDAFAIELERQGFGNK 1135
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R ++ + +E F ++ ET ++L G+++ ATV R+
Sbjct: 1136 SITLYDIRAELNSRYKDLRTPFRSVTAEELFDYLTKETPESLFVGKMMLATVAGFTYRKP 1195
Query: 858 QGQR-----------------AICV-----------------------------LESGLA 871
QG++ C+ ++GL
Sbjct: 1196 QGEQLDQANPVRNDETGFWQCPFCMKTEFPELSEVWNHFDAGECPGQATGVRLRFDNGLN 1255
Query: 872 GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQN 931
G + ++ SD + +++ G + ++ I R+ + + S++ + + +
Sbjct: 1256 GFIHIKNLSDKHVKNP-EERVQIGQTVHVRVTKIDIERFSLECSSKSSDLCDRKNEWRPR 1314
Query: 932 LDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGES 991
D Y +E+ Q Q++A +K+ A++ + +R+IVHP F N++ EA+KLL + G+
Sbjct: 1315 KDQCYDQEQEE-QDTQKEADSKKQQARQQYVKRVIVHPSFHNISYTEALKLLEGLDQGDV 1373
Query: 992 IIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDE 1051
I+RPSS+G +LT T KV DG+Y H D+ E GK+ ++ +G++L IG D FEDLDE
Sbjct: 1374 IVRPSSKGSDHLTATWKVTDGIYQHIDVREEGKE-----NVFSLGQSLWIGNDEFEDLDE 1428
Query: 1052 VVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG 1108
++ R+I P+ +++ +L+Y+ +R GSK + +E+L+ EK + P +I Y +S +PG
Sbjct: 1429 IIARHITPMAIYVRDLLNYKYYRDTDGGSKEKAEEILKAEKQKNPNKIHYIVSVSKTYPG 1488
Query: 1109 TFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAP------ 1162
F+L+Y+ HEY+ + P G++FR + F+ ++ L+ +F+ H DP P
Sbjct: 1489 RFLLSYLPRNKFRHEYVTITPDGYRFRHQSFDSVNSLLKWFKEHFRDPIPIETPKSTPKV 1548
Query: 1163 ---------------------SIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRD 1201
+I SVA +P ++ + A + + E G + +
Sbjct: 1549 GGMSTRTPYGSTPKFSDLNSEAIESVAKNMPPHMLSSLSAAAHHTPHYSYTPLEYG-SSN 1607
Query: 1202 RSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSN 1245
+TP + +G+ Y + H S PR YG + SN S+
Sbjct: 1608 FVTTPYTPSGQTPYMTPYQQTPHFSQTPR-YGTSTPSQYSNKSS 1650
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 42/191 (21%)
Query: 13 LAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHL 72
+ G P + +E+ WIY Q P +GA + K ++ I + LD +
Sbjct: 292 VTGVPEGMMELEEEAEWIYKQAFCK--PHVSDQGAVTRKPPSNVP----KIKQALDFMRN 345
Query: 73 QKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
Q L++PFIA YRKE + DL N+ LW I+ D W
Sbjct: 346 QHLEVPFIAFYRKE---YVQPDLNIND--------------------LWKIYKFDSMWCQ 382
Query: 133 LQKRKSALQSYYK--------KRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREV 184
L RK++LQ ++ K E I ++ R+ ++ L L ++ E+
Sbjct: 383 LLGRKTSLQRLFENMRNYQLDKLMETPDAPIPEDMRVIRDEDL-----TRLRGVQSPEEL 437
Query: 185 DDVDLKFNLHF 195
DV L F L++
Sbjct: 438 KDVHLHFLLYY 448
>gi|347970243|ref|XP_313379.5| AGAP003619-PA [Anopheles gambiae str. PEST]
gi|333468841|gb|EAA08949.5| AGAP003619-PA [Anopheles gambiae str. PEST]
Length = 1865
Score = 448 bits (1152), Expect = e-122, Method: Compositional matrix adjust.
Identities = 310/1172 (26%), Positives = 553/1172 (47%), Gaps = 117/1172 (9%)
Query: 216 YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQA 275
Y C K GL + +FG + EQ + E+E + P E+A + F S +
Sbjct: 570 YEICRKRGLTGLTKRFGLTPEQFAENVRDSYQRHEVEQETKEPLEVAKEYMGTTFESPEE 629
Query: 276 VLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREK 335
VLQG M A +++ EP RK +R ++ + A ++ PT G ID H +K+L+EK
Sbjct: 630 VLQGGVFMVARQLAREPLFRKCIRELYFERAKLNVRPTKKGMKEIDETHHCYAMKYLKEK 689
Query: 336 PLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWND 393
P+R Q+L + A+E+KLL + ++ ++ + K Y D +K+ Q WN
Sbjct: 690 PVRDLTGDQYLKLYIAQEDKLLTMEFVDRIEGNTSGDFLEELKALYHRDEFAKNVQEWNK 749
Query: 394 QRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
R + A++ ++P + +E + + AK +L + L+N + V PY+ D
Sbjct: 750 VRAECVVLAVNRMVIPDLKRELHNTLLTEAKDAVLRVCCRKLYNWIKVAPYKPPVPDFDD 809
Query: 454 DE---EAAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVR--DQQSKK 507
E RV+ + P ++ F ++ GEV D L L + R ++Q K+
Sbjct: 810 YEWETTRGVRVMGVAYVPDYTQSAFGAIIAPDGEVTDYLRIPHLLKKKNAYRESEKQCKE 869
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+D + F+ +PHV+V+G + ++ D E + ++ EE + ++++
Sbjct: 870 SDLRTITNFIRSKKPHVIVIGGESKDALMVQQDFVECVKRLQEE------EQFPQIAVEI 923
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
D L ++Y NS + +++A++L R +Q+PL + LC EIL +
Sbjct: 924 ADNELAKVYANSVKGTTDFKEYPPLLRQAISLARRIQDPLVEFSQLCNSDEEILCLRYHT 983
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
L+ LT +E I+ ++ TN+VG+D+NLA+ +QFI GLGPRK +L + L
Sbjct: 984 LQEQLTKEELLENIQLEFINRTNEVGVDVNLAVQNPLTANLVQFICGLGPRKGQTLLKVL 1043
Query: 688 VRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
+ + + R VT +G KVF+N GF+++ + S+ ++++LD +R+HPE+Y
Sbjct: 1044 KQTNSRLENRTQLVTTCHMGPKVFINCSGFIKIDTNSLGDSTETYVEVLDGSRVHPETYE 1103
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKR 803
A+++A + D D+E A+E + + P+ LK LD E R+ NK
Sbjct: 1104 WARKMAVDALEYD------DEEANPAGALEEILEAPERLKDLDLDAFAIELDRQGFGNKS 1157
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRVQ 858
TLY IR EL ++D R ++ + +E F ++ ET ++L G+++ ATV R+ Q
Sbjct: 1158 ITLYDIRAELNSRYKDLRTPFRSVTAEELFDYLTKETPESLFVGKMMLATVSGFTYRKPQ 1217
Query: 859 GQR-----------------AICV-----------------------------LESGLAG 872
G++ C+ ++GL G
Sbjct: 1218 GEQLDQANPVRNDETGFWQCPFCMKTEFPELSEVWNHFDAGECPGQATGVRVRFDNGLNG 1277
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNL 932
+ ++ SD + +++ G + ++ I R+ + + S++ + + +
Sbjct: 1278 FIHIKNLSDKHVKNP-EERVQIGQTVHVRVTKIDIERFSLECSSKSSDLCDRKQEWRPRK 1336
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
DP Y +E+ + +E A +K+ A++ + +R+IVHP F N++ EA+KLL + G+ I
Sbjct: 1337 DPCYDQEQEEADTRKE-ADSKKQQARQQYVKRVIVHPSFHNISYAEALKLLEGYDQGDVI 1395
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
+RPSS+G +LT T KV DG+Y H D+ E GK+ ++ +G++L IG D FEDLDE+
Sbjct: 1396 VRPSSKGSDHLTATWKVTDGIYQHIDVREEGKE-----NVFSLGQSLWIGNDEFEDLDEI 1450
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
+ R+I P+ ++++ +L+Y+ +R GSK + +E+++ EK + P +I Y +S +PG
Sbjct: 1451 IARHITPMATYVRDLLNYKYYRDTDGGSKEKAEEIIKAEKQKNPNKIHYIVSVSKTYPGR 1510
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L+Y+ HEY+ + P G++FR + F+ ++ L+ +F+ H DP +
Sbjct: 1511 FLLSYLPRNKFRHEYVTVTPDGYRFRHQTFDSVNSLLKWFKEHFRDP----------IPI 1560
Query: 1170 MVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRTGR---NDYRNGGGRDGHPS 1226
P +P GG S+ + +G + N + + N H S
Sbjct: 1561 DTPKSTPKVGG--MSSRTPYGSTPKFSDINSETIESVAKNMPTHMLNSLSAAAHHTPHYS 1618
Query: 1227 GLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYDTPKWDSANKSGDDSWGNFPGAKAQNP 1286
P YG +SN + + + Y TP + + S +G ++ N
Sbjct: 1619 YTPLEYG---------SSNFVTTPYTPSGQTPYMTPYQQTPHFSQTPRYGTSTPSQYSNK 1669
Query: 1287 AGREAFPGG--------WGSSGGGGSSGWGGA 1310
+ P G G S G GG
Sbjct: 1670 SAYTGIPTGHPPPSASHHGYKSTSASRGMGGV 1701
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 76/192 (39%), Gaps = 44/192 (22%)
Query: 13 LAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHL 72
+ P + +E+ WIY Q P +GA + K ++ I LD +
Sbjct: 311 VTAVPEGSNELEEEAEWIYQQAFCK--PHVSDQGAMTRKPPSNVP----KIKHALDFMRN 364
Query: 73 QKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
Q L++PFIA YRKE + DL N+ LW I+ D W
Sbjct: 365 QHLEVPFIAFYRKE---YVQPDLNIND--------------------LWKIYKFDSMWCQ 401
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALN---------QQLFDSISKSLEAAETERE 183
L RK++LQ Y ES R Y +L N + + D L + ++ E
Sbjct: 402 LLGRKTSLQRLY------ESMRNYQLDKLMENPDAPIPEDMRVIRDEDLSRLRSVQSHEE 455
Query: 184 VDDVDLKFNLHF 195
+ DV L F L++
Sbjct: 456 LKDVHLHFLLYY 467
>gi|170581758|ref|XP_001895824.1| SH2 domain containing protein [Brugia malayi]
gi|158597117|gb|EDP35343.1| SH2 domain containing protein [Brugia malayi]
Length = 1512
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 337/1232 (27%), Positives = 580/1232 (47%), Gaps = 156/1232 (12%)
Query: 26 ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---------DDIMRFLDLLHLQKLD 76
E+ WIY + + DL I D I L + Q +
Sbjct: 322 EAKWIYQYAFDNATLSEQEESCLTVLSNPDLRIDERAKIAAEAPDKIKEALKFIRNQLFE 381
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE S L V ND LW ++ D+KW LQ+R
Sbjct: 382 VPFIAFYRKEYVESCL-------VIND----------------LWKVYQWDEKWCHLQQR 418
Query: 137 KSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
K L K+ Y+ E+ R+ Q + + +T + DV KF L+
Sbjct: 419 KKRLLELMKRMLNYQMENDNAAG-MRIVTEQDM-----NEVHGVQTVEGLMDVSTKFQLY 472
Query: 195 FPP------------------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
+ P E E +++ R+ KY C + GL +AS+FG +
Sbjct: 473 YGPEVPKMIDWEKIQNLSEDDPEREAAEMRFRAATRTDKYMLCIQNGLSGMASRFGLTPL 532
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
Q L K D ++D +E P + A + C F + +AVL GA H+ A ++S EP VR+
Sbjct: 533 QFAENLDW-KRHDIVQDDEE-PLKAAEQYVCQSFPTPEAVLTGAIHVVAKQLSREPKVRE 590
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
+R + +S CPT G ID H+ +++R+KP+ ++L +A L
Sbjct: 591 LLRLRYRLRLKISVCPTKKGREEIDENHKLWPRRYVRDKPVANLRHDEYLWYVQAHASGL 650
Query: 357 LQVT--------IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
L + I+ + L + S+ + Y D S+ +WN RE ++ ++NFLL
Sbjct: 651 LNLKLHCDTEDDIRFEKTMLQEFLSE--QPYHRDEYSRVVDMWNKIREEVVTVCVNNFLL 708
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR---KDNDITPDEEAAPRVLACC 465
P +EA + AK +++ + + L++++ Y+ D+D +VL+
Sbjct: 709 PVFEREAHERLLQEAKDYVIKQSTQNLYDRIKTAAYRNVHDDDDDFESGFAGGTKVLSIV 768
Query: 466 WGPGKPETTF-VMLDSSGEVVDVLFTGCLT--LRSQNVRDQQSKKNDQERLLKFMMDHQP 522
+ + + +F ++D G+++D L +T + S+ + + K+ D L KF+ +P
Sbjct: 769 YPEERDQASFCALIDQDGQILDHLRLVHITKSMNSKRSDEAELKRQDMIHLRKFIEKRRP 828
Query: 523 HVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRIS 582
HV+ + N+ L+ DI ++ ++ E+S+ D ++Y +S+ +
Sbjct: 829 HVIAICGENMDAYYLRRDIESLL--------HEISGIAKEISVEIVDNEAAKIYMHSKQA 880
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE 642
+ +++AV+LGR L +PL A LC +IL PL++ + DE +
Sbjct: 881 ITEFSNYPPMLRQAVSLGRLLLDPLIEYAHLCNTDDDILCVSYHPLQSEVNKDELLFALS 940
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF-TRKDFVT 701
++ N+VG+D+N + LQF+ GLGPRKA L + L + + +R VT
Sbjct: 941 LEFINRVNEVGVDVNRCLEYSHTSYLLQFVCGLGPRKAVHLLKILKQNDNLLESRTKLVT 1000
Query: 702 AHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIE 761
+G KVF+N+ GF+++ + + + ++++LD +R+HPE+Y A+++A + D
Sbjct: 1001 LCRMGPKVFMNSAGFIKIDTAKVSERTDAYVEVLDGSRVHPETYEWARKMAVDALEIDDA 1060
Query: 762 GDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQ 818
D A+E + PD LK LD +E R+ NK TLY IR EL H ++
Sbjct: 1061 ADPTS-------ALEEILQNPDKLKDLDLDAFAEELARQGFGNKSITLYDIRAELNHRYK 1113
Query: 819 DWRNQYKEPSQDEEFYMISGETEDT---LAEGRVVQATVRR------------VQGQRA- 862
D R Y+ PS + F M++ ET D+ L GRV+ R+ ++ +R
Sbjct: 1114 DLRIPYESPSAERIFTMLTKETSDSIGKLVMGRVMHIVYRKPRDPEERERVPPIRDERTG 1173
Query: 863 -----ICV---------------------------LESGLAGMLMKEDYSDDWRDSEL-- 888
C +SG+ G + + Y D DS +
Sbjct: 1174 QWKCQYCYKPDFNNTNEVWQHIDSCPGQPVGVKVRFDSGITGFIPNK-YLSDRPDSFVDP 1232
Query: 889 SDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQE 948
S+++ + C+I + +++ CR S++R + Q+ + D Y+ + + E++
Sbjct: 1233 SERVRRNQPIYCRILELDPDKFSATCSCRSSDLRGLQPQNSE-FDRYFDKLKCQDDDEKD 1291
Query: 949 KARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLK 1008
K +E+ +F +R+I HP F NVT +A ++L E GE+IIRPSS+ S+LT+T K
Sbjct: 1292 KKLREQRKIVTYFVKRVISHPSFHNVTFKDAERMLQKFEQGEAIIRPSSKSVSHLTVTWK 1351
Query: 1009 VYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAML 1068
V DG+Y H DI E GK H+ +GKTL IG + FEDLDE++ R+I P+ + + +L
Sbjct: 1352 VADGIYQHIDIKEEGKQHQ-----FSLGKTLLIGTEEFEDLDEILARHIQPMAALARDVL 1406
Query: 1069 SYRKFRKGSKAE----VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEY 1124
S++ + G +AE ++ L EK P RI Y S ++PG F+++Y+ HEY
Sbjct: 1407 SHKYYLDGKRAEDRDAIEGYLFDEKKRNPQRIPYTLTPSQDYPGKFVISYLPRNKARHEY 1466
Query: 1125 IGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
+ + P+GF+FR+++F+ ++ ++++F+ H +P
Sbjct: 1467 MTVTPEGFRFRQQLFQSLETVLSWFKVHYREP 1498
>gi|156547802|ref|XP_001606226.1| PREDICTED: transcription elongation factor SPT6-like [Nasonia
vitripennis]
Length = 1341
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 338/1169 (28%), Positives = 565/1169 (48%), Gaps = 111/1169 (9%)
Query: 29 WIYNQLLSGTLPLFGQRGAGSPKEG-HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEE 87
WIY + L Q+ +P +G H S I L + + L++PFI+ YRKE
Sbjct: 194 WIYTEAFKKR-SLSSQQDRTNPDKGPHTAS----KIYNSLFFIRNEYLEVPFISHYRKEY 248
Query: 88 CLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKK- 146
L L D+E LW ++ D KW + +RK AL + ++K
Sbjct: 249 VLPEL-DIED----------------------LWKVYKFDAKWCQMVQRKQALLALFRKL 285
Query: 147 -RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP--------- 196
RY+++S ++ L+++ + K LE A+T E++D F L+
Sbjct: 286 KRYQKDSP---SSEKVILDKEEHE---KQLEIAQTAEELNDCYEHFMLYHADEILEMQEI 339
Query: 197 --PGEVGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELED 253
E G E + KR +RS +YS +AGL +A +FG EQ +S E E+E
Sbjct: 340 ELKQEKGKPEEKLKRAVRRSGQYSIYKRAGLENLAKRFGLRPEQFSKNVSEEYQIFEVEQ 399
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
P +A+ + F S+ VL+ +HM A++++ EP +RK VR+ F A +S PT
Sbjct: 400 DPNEPGTIAAEYVGKNFKSADEVLKAVQHMVAIQLAREPLLRKSVRATFKRKAKISVRPT 459
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK--LPEDSLNKL 371
G +ID H +K+L++KP+ Q+L + AE +KL+ ++ + D+
Sbjct: 460 KQGIKSIDGNHPIYSMKYLKDKPVADLVGDQFLKLAMAEADKLIVISFSDTIEGDTSKNY 519
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
K+ Y+ D SKS + WN R ++ AL+ +LP + KE S + AK ++
Sbjct: 520 VEQMKQLYVKDEFSKSVREWNALRVGSVEIALEKIVLPDLKKELHSTLLSEAKECVMRSC 579
Query: 432 GKALWNKVSVGPY-----QRKDNDITPDEEAAPRVLACCWGPGKPETTFV-MLDSSGEVV 485
+ N + V PY +K +D D RV+ + P + +++ GE
Sbjct: 580 VRKAHNWIKVAPYACDLFSQKTDDDKRDASEGLRVMGVAYVPDFSIAAYACLVEPKGECT 639
Query: 486 DVLFTGCLTLRSQNVR--DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYE 543
D + L R R ++ +K+ D + F+ +PHVVV+G + + D+I E
Sbjct: 640 DYVKLPHLLKRKNIYRNLERSAKEADLAAIKNFIAGRRPHVVVIGGESKDALLIADEIRE 699
Query: 544 IIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYL 603
I +V E + + D L ++ NS + + +++A++L R L
Sbjct: 700 CIAALVAE------KRCPAIKVEIMDNHLAVIFANSLQARSEFRDYPLELRQAISLARRL 753
Query: 604 QNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
Q+PL + LC EIL K L++ L +E I+ V+ N+VG+DIN I +
Sbjct: 754 QDPLVEFSQLCNSENEILCLKYHDLQDQLAKEELLQSIQLEFVNRVNEVGVDINKIIQQH 813
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRA--GAIFTRKDFVTAHGLGKKVFVNAVGFLRVRR 721
LQ++ GLG RKA +L R + + R VTA +G KVF N VGF+++
Sbjct: 814 HGENLLQYVCGLGERKAQTLIRIVKHKENKCLENRSQLVTACHMGPKVFTNCVGFIKIDT 873
Query: 722 SGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY--NRDIEG-DLNDDEDALEMAIEHV 778
A S+ +++ LD +R+HPE+Y A+++A + +R IE DL LE
Sbjct: 874 DSLADSTEDYVEELDGSRVHPEAYEFARKMAADARRSSRRIEDLDLGAYSKELE------ 927
Query: 779 RDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISG 838
K +HI TL I REL G++D R+ Y+ P D+ F M++
Sbjct: 928 -------KQGFGSKHI----------TLRDIGRELDAGYKDARSPYRSPDPDKLFNMLTK 970
Query: 839 ETEDTLAEGRVVQATVRRVQGQRAICV-------LESGLAGMLMKEDYSDDWRDSELSDK 891
ET ++ G++V+ATV + +A L++G+ G + K + SD++ + +
Sbjct: 971 ETPESFHIGKLVEATVTGISYNKARGTAAGVQLRLDNGIRGFIHKRNLSDEYA-TNPEEG 1029
Query: 892 LHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKAR 951
+ G + C+I I+ +R+ V + +++ + ++ D YY + E A
Sbjct: 1030 VRVGGRIRCRITKIEAHRFSVEATSKSNDLADEGHRWRPRKDRYYDTAAENVYRLSEAAA 1089
Query: 952 KEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYD 1011
+K + + RLIVHP F+N T EA +LL GE+IIRPSS+G ++LT+T KV D
Sbjct: 1090 AKKTAQRPAYARRLIVHPAFRNATYAEAEELLKTMSQGEAIIRPSSKGDNHLTVTWKVTD 1149
Query: 1012 GVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYR 1071
V+ H D++E K+ +G+TL+IG + F+DLDE++ R++D + + ++ ++S+R
Sbjct: 1150 DVHQHIDVLEERKEQP-----YALGRTLRIGHEEFDDLDEILARHVDSMAASVRELISFR 1204
Query: 1072 KFR-----KGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIG 1126
+ G K + +E+LR ++ ++ Y S HPG F+L+Y+ T HEYI
Sbjct: 1205 REYYVPRVMGLKEKAEEILRDRQSRDASKTHYILSPSKSHPGKFLLSYLPRTRCAHEYIA 1264
Query: 1127 LYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1155
+ KGF+FR F L+ +F++H +D
Sbjct: 1265 VVSKGFQFRGYTFTRFSELMGWFKKHFND 1293
>gi|391332970|ref|XP_003740899.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor
SPT6-like, partial [Metaseiulus occidentalis]
Length = 1279
Score = 445 bits (1144), Expect = e-121, Method: Compositional matrix adjust.
Identities = 343/1240 (27%), Positives = 590/1240 (47%), Gaps = 171/1240 (13%)
Query: 36 SGTLPLFGQRG-AGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKD 94
SG PL G++ + PK + +RF+ H + +PFIA YRKE + D
Sbjct: 81 SGHQPLGGRKNRSAVPKIA--------EALRFMRNSHFE---VPFIAFYRKE---YVQPD 126
Query: 95 LEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRR 154
L N+ LW I+ D++W L+++K ++ +KK E +
Sbjct: 127 LTIND--------------------LWIIYKWDERWCQLRQQKQNMEKLFKKMQEYICEQ 166
Query: 155 IYDETRLALN-QQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQY------ 207
I ++ A + +Q+ ++ + L A++ E+ DV L F L++ + E
Sbjct: 167 ILNDDGAAEHLRQIEENDFERLRDAQSPEELKDVYLHFLLYYAQDLPAMQEANLQKRKKK 226
Query: 208 ---------------------------------------KRPKRSTKYSSCSKAGLWEVA 228
K+ +R ++ C + GL +A
Sbjct: 227 REEERVKRLERQRAAREAGGDGGLDEEEEMDEGEEELFLKKSRRKDGFAVCREMGLSALA 286
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEI 288
KFG + +Q G L E+ P E A+ + + VL GAR+M A EI
Sbjct: 287 KKFGLTPQQFGENLRDNYQRHEVVQFPVQPLEAAAEYVNERLKTPLEVLNGARYMVACEI 346
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLI 348
+ +P VR+ VR F + A + PT G ID H K+L+ KP+R + Q+L +
Sbjct: 347 ARDPTVRRCVRETFFERAKLCVAPTKKGSKEIDESHACYTFKYLKNKPVRSLQADQYLKL 406
Query: 349 QKAEEEKLLQVTIKLPEDSLNKL-----FSDCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
AEEEKLL+++I++ D + S+ ++ Y D SK+ Q WN QRE L AL
Sbjct: 407 SMAEEEKLLKISIRMDGDGXRPVKNGTYASEVRQLYHRDEFSKNVQEWNSQREEALNHAL 466
Query: 404 DNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD---NDITPDEEAAPR 460
L P+ KE + + A +L K +N + V PY D + D R
Sbjct: 467 TKMLYPTFEKELKLRLLREAYDNVLRSVSKKFYNWLKVAPYNPPDWIQEEEDFDTREGVR 526
Query: 461 VLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQ--SKKNDQERLLKFM 517
+ A + F +++ GEV D L + R R+ + +K +D +L KF+
Sbjct: 527 IFAIAYQNDWNVPAFGALINGDGEVTDYLRLENILKRKNAWRESERAAKISDLAKLKKFI 586
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
+ +PH VV+ A + S+K+D+ ++I ++ ++ + + ++ D L +Y
Sbjct: 587 AEKKPHCVVISAESREALSIKEDVEQVIKELGDD------DQFPAVQVMLLDCGLALVYA 640
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
NS+ + + +K+AV+L R +Q+PL + LCGP EIL K PL++ + +E
Sbjct: 641 NSKRAEQEFREYPPLLKQAVSLARRMQDPLIEFSQLCGPDEEILCLKYHPLQDNVPKEEF 700
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTR 696
+ +++ TN+VG+DIN + + LQF+SGLGPRKA ++ ++L ++ + + +R
Sbjct: 701 QWALALELINRTNEVGVDINRCMEQSHTSELLQFVSGLGPRKAHAMIKTLKQSHSKLDSR 760
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRR-SGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
VT LG KVF+N GF+R+ S ++S + ++LD +R+HPE Y A+++A +
Sbjct: 761 TSLVTTLKLGPKVFLNCAGFIRIESGSFLDNNTSAYAEMLDGSRVHPEMYEWARKMATDA 820
Query: 756 YNRDIEGDLN-DDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRR 811
D D N + DALE +E+ PD LK LD E +R+ NK TLY IR
Sbjct: 821 LEYDDNEDANLNPADALEEILEN----PDKLKDLDLDAFAVELERQGYGNKSITLYDIRA 876
Query: 812 ELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRVQGQR----- 861
EL + ++D R +Y P ++ F +++ ET +T G++V V ++ QG++
Sbjct: 877 ELNNRYKDLRVEYVPPEREILFNLLTKETPETFFVGKLVTCQVSGIARKKPQGEQLDQAN 936
Query: 862 ------------AICV-----------------------------LESGLAGMLMKEDYS 880
C+ ++GL G + ++ S
Sbjct: 937 PIRNDESGLWQCPFCLKNDFPELSEVWNHFDAGKCPGQAMGVKVRFDNGLNGFIPTKNLS 996
Query: 881 DDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEER 940
D R S +++ G I +I I +R+ V + + S++ + + D YY E
Sbjct: 997 DK-RVSNPEERVKIGQIAQGRITKIDISRFSVDVTTKSSDLADKNGEWKPPKDLYYDHE- 1054
Query: 941 SSRQSEQEKARKEKELAKKH-FKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRG 999
+ + E++K +L ++ + +R+IVHP + NV+ EA+K+L +E GES+IRPSS+G
Sbjct: 1055 -AEEKERKKVNDVSKLKQRQTYVKRVIVHPSYHNVSFSEAVKILDRQEQGESVIRPSSKG 1113
Query: 1000 PSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDP 1059
+LT+T KV+ + H D+ E GK++ +G +L I + FE LDE++ +Y+ P
Sbjct: 1114 VDHLTVTWKVHKDILQHIDVQEKGKENS-----FSLGSSLVINGEEFECLDEILVKYVQP 1168
Query: 1060 LVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIR 1116
+ + + ++ +R F+ G K V+ L EK + P+RI Y + PG F+L+Y+
Sbjct: 1169 MAGYARDLIKFRYFQDFEGGKKELVERWLTEEKRKAPSRIPYCVTACAQFPGKFLLSYLP 1228
Query: 1117 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
S+ HE++ + P G+++R+ F ++ L +F+ H + P
Sbjct: 1229 SSKRRHEFVSVTPSGYRYRRETFHSVNGLFRWFKEHFEAP 1268
>gi|321460803|gb|EFX71841.1| hypothetical protein DAPPUDRAFT_201385 [Daphnia pulex]
Length = 1703
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 384/1469 (26%), Positives = 635/1469 (43%), Gaps = 274/1469 (18%)
Query: 26 ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSI----SRDDIMRFLDLLHLQKLDIPFIA 81
E+ WIY S + Q G +G + I + + I + L+ + Q ++PFIA
Sbjct: 315 EAEWIYKHAFSKA-SISNQDGTA---DGREKVIKGPQTVEKIRKALEFIRNQHFEVPFIA 370
Query: 82 MYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQ 141
YRKE L L VN+ LW ++ D+KW LQ RK +
Sbjct: 371 FYRKEYVLPELS------VND-----------------LWRVYKFDEKWTQLQTRKKNMM 407
Query: 142 SYYKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAETEREVDDVDLKFNLHF--- 195
+KK + +S ++ ++ + L D + L ++ E+ DV F L++
Sbjct: 408 RLFKKMQKYQSEKLTQNLTESIPENVRVLKDEDTDRLRMVQSIEELSDVYNHFTLYYGND 467
Query: 196 ---------------------------------------------PPGEVGVDE-GQYKR 209
P +V VDE K+
Sbjct: 468 VPAMQEEHRRRAREEAKERRSSAARRRLNEDGEPMDVDDLGEDLRDPDDVNVDEESSIKQ 527
Query: 210 PKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM 269
KRS YS C++AGL + K+G S EQ + E++ P ++A + A
Sbjct: 528 AKRSDLYSLCARAGLDGLLRKYGLSPEQFAENMRDNYQRHEVDQTSTEPFDVALEYVSAK 587
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
F ++ VL+ A +M AV+I+ EP VR+ VR F + A + PT G ID H +
Sbjct: 588 FPTATEVLKAANYMLAVQIAKEPLVRQCVRESFFERARIDVIPTKQGLKEIDENHNLYPI 647
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSDGVSKS 387
K+L++KP+R D Q+L + AE++KLL + K+ + + K + D SK
Sbjct: 648 KFLKDKPVRDLVDDQFLRLVVAEQDKLLTIVFQTKIEGATTASYVDEIKALFTRDEFSKL 707
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
Q WND R I+ AL F+ P V
Sbjct: 708 VQEWNDLRNEIIDLALSKFVAPYKVD---------------------------------F 734
Query: 448 DNDITPDEEAAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNV---RDQ 503
D++ D + RV+ + + F +++ GE D + + L+ +N D+
Sbjct: 735 DDEEDWDTKNGIRVMGLSYVADLDQAAFGCLINVDGECSDHIRLEHI-LKRKNAWKEMDR 793
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDEL 563
K+ D L F+ +PHV+ + A + T L +D+ I ++VE+ + +
Sbjct: 794 TGKERDLNMLRNFIFSKKPHVIAVSAESREATMLVEDLRAITAQLVEDE------QWPTI 847
Query: 564 SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSW 623
++ D SL +++ NS + + ++ A+++ R LQ+PL + LC EI+
Sbjct: 848 NVELVDNSLAKVFANSTRAETEFREYPLLLREAISIARGLQDPLIEYSQLCNTDEEIVCL 907
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
K +++ L+ +E + V+ TN+VG+DIN AI+ +QFI GLGPRK +L
Sbjct: 908 KYHSMQDQLSKEELLEGLYLEFVNRTNEVGVDINRAINYPHTANLVQFICGLGPRKGQAL 967
Query: 684 QRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
+ L + + R VTA +G KVF+N GF+++ + S+ ++++LD +R+HP
Sbjct: 968 IKILKQNNQRLENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTESYVEVLDGSRVHP 1027
Query: 743 ESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDRHIKEKKRE- 800
E+Y A+++A ++ DDEDA A+E + + P+ LK LD E +R+
Sbjct: 1028 ETYEWARKMA-------VDALEYDDEDANPAGAVEEILEAPERLKDLDLDAFADELERQG 1080
Query: 801 --NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
NKR TLY IR EL H ++D R Y++PS ++ F M++ ET T G++V ATV Q
Sbjct: 1081 FGNKRITLYDIRSELNHRYKDGRPSYQQPSPEDIFNMVTKETPHTFFIGKLVLATVTGFQ 1140
Query: 859 GQR------------------------------------------------AICV---LE 867
++ AI V LE
Sbjct: 1141 HRKPKREELDRANPNRNETTGLWQCPFCLQNDFTDLSEVWNHFDAGSCSGQAIGVRIRLE 1200
Query: 868 SGLAGMLMKEDYSDDWRDSELSD---KLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN 924
+GL+G L + S DSE+++ ++ G + C+I I R+ V + S++ +
Sbjct: 1201 NGLSGFLPMKCLS----DSEVTNPEERVRPGQTIHCRITKIDVERFSVVATSKSSDLMDR 1256
Query: 925 RYQHCQNLDPYYH---EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMK 981
+ D YY EE + E K K ++ + +R+IVHP F+N+ EA K
Sbjct: 1257 NGEWRPPKDAYYDTPAEEAILKAEEDSKKLKHRQ----SYTKRVIVHPSFKNIGFKEAEK 1312
Query: 982 LLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI 1041
L+++ + GE I+RPSS+G ++LT+T KV +G+ H D+ E GK++ +G++L I
Sbjct: 1313 LMTSMDQGEVIVRPSSKGTNHLTVTWKVGEGICQHVDVREEGKENA-----FSLGQSLMI 1367
Query: 1042 GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK-----------GSKAEVDELLRIEKA 1090
++ FEDLDE++ R+I+P+ H + + ++R FR + +E+++ +K
Sbjct: 1368 NDEEFEDLDEIIARHINPMAGHARDLYAFRYFRDLGVPEENYTAGKERERAEEVIKDDKK 1427
Query: 1091 EFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ P +I Y S + PG F+LTY+ T HEYI + P GF+FR + + + L +F+
Sbjct: 1428 KNPAKIHYFVTASRDFPGKFMLTYLPRTTAKHEYITVTPDGFRFRGHVHDSLASLFRWFK 1487
Query: 1151 RHIDDP-----------QGDSAPSIRSVAAM---------------VPMRSPANGGSTAS 1184
H DP G A S R+ V PAN + S
Sbjct: 1488 EHFRDPIPGTPSSRGGGVGHHASSSRTPGYGGTGTTPNVNPETLQRVAQSIPANMLHSLS 1547
Query: 1185 AGSGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPR----------PYGG 1234
+ + G+ G+ ++TP + +G + H PR P G
Sbjct: 1548 QAAHFQGTPTPFGYP---ANTPYTPSGTTPFMTPFATTPHQPQTPRYSGTPATNAAPSAG 1604
Query: 1235 RGRGRGSNNSNRGNSSNSERQDSSYDTPKWDSANKSGDDSWGNFPGAKAQNPAGREAFPG 1294
+G +++R + S D W++A + N AK P R A
Sbjct: 1605 GSQGTSKTSTSRSAAPASSEPDD------WNAATNAWGSVTSNRTAAKT-TPNTRPASST 1657
Query: 1295 GWG------SSGGGGSSGWGGASDGDNGG 1317
G S G + WG S G
Sbjct: 1658 PRGKTTPSTSRAGTSTDDWGAPSKTPASG 1686
>gi|324500373|gb|ADY40177.1| Transcription elongation factor SPT6 [Ascaris suum]
Length = 1496
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 338/1233 (27%), Positives = 582/1233 (47%), Gaps = 155/1233 (12%)
Query: 26 ESTWIY-----NQLLS----GTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLD 76
ES WIY N LS L L + G + + + I L+ + Q +
Sbjct: 305 ESKWIYQYAFDNATLSIQEECCLTLLARADQGDEERRRVAKEAPEKIREALNFIRNQLFE 364
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE S L V ND LW ++ D+KW LQ+R
Sbjct: 365 VPFIAFYRKEYVESCL-------VIND----------------LWKVYQWDEKWCHLQQR 401
Query: 137 KSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
K L K+ Y+ E+ R+ Q + + +T + DV KF L+
Sbjct: 402 KKRLLELMKRMLNYQMENDGA-SGLRVVTEQDM-----NEVHGVQTVEGLMDVSAKFQLY 455
Query: 195 F---PPGEVGVDEGQYKR---------------PKRSTKYSSCSKAGLWEVASKFGYSSE 236
+ P + + Q R+ KY C + G+ +A++FG + +
Sbjct: 456 YGHEVPKMIDWETTQIMHEDDHEREERETRFRAATRTDKYMLCIQNGIDAMAARFGLTPQ 515
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
Q L K D ++D +E P + A + C F + ++VL GA H+ A ++S EP VR+
Sbjct: 516 QFAENLEW-KRHDVIQDDEE-PLKAAEQYVCQSFPTPESVLSGAVHVVAKQLSREPKVRE 573
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
VR + +S PT G ID H+ +++++KP++ ++L +A+ L
Sbjct: 574 MVRMRYRLRLRISVYPTKKGREEIDESHKLYRRRYIKDKPVKALHHDEYLWYVQAKNCGL 633
Query: 357 LQVT--------IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
L + I+L LN + Y D S ++WN RE + ++ FL+
Sbjct: 634 LNIRLHCDTEDDIRLRRTFLNDFLE--MQPYHKDEFSNVVEMWNKIREEAVTVCINEFLI 691
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE----AAPRVLAC 464
P +E + A+ +++ + + L+ ++ Y + +D + + R+L+
Sbjct: 692 PVFEREVHERLLQEARDYVVKQCTQNLYERIKTATYHVEQDDDDEYRDDDLISGTRILSL 751
Query: 465 CWGPGKPETTFV-MLDSSGEVVDVLFTGCLTLRSQNVRDQQS--KKNDQERLLKFMMDHQ 521
C+ + + +F +++ G+VVD L + +++ ++ K+ D E L KF+ +
Sbjct: 752 CYPEERDQASFCALINHEGQVVDHLRLVHIVKNGNSMKPGEANLKRQDMEYLGKFIEKRR 811
Query: 522 PHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRI 581
PHVV + NL LK DI EI+ + + E + M + + D ++Y +S+
Sbjct: 812 PHVVAICGENLHAYYLKRDI-EIMLRQLAE-----SNNMPVIPVEIVDNEAAKVYMHSKQ 865
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI 641
++ + P +K+AV+LGR L +PL +C +++L PL+ + D+ +
Sbjct: 866 AATEFPDYPLLLKQAVSLGRLLLDPLIEYCHMCNIDQDVLCISYHPLQTEINKDDLMFAL 925
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF-TRKDFV 700
++ N+VG+D++ + + LQF+ GLGPRKAA+L + L + + +R V
Sbjct: 926 SLEFINRVNEVGVDVHRCLEYPYTANMLQFVCGLGPRKAANLLKVLKQNDNLLESRTKLV 985
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
T +G KVF+N GF+++ + + + ++++LD +R+HPE+Y A+++A + D
Sbjct: 986 TLCRMGPKVFMNCAGFIKLDTAKVSERTDAYVEVLDGSRVHPETYEWARKMAVDALEIDD 1045
Query: 761 EGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGF 817
D A+E + PD LK LD E R+ NK TLY IR EL H +
Sbjct: 1046 TADPTS-------ALEEILQNPDKLKDLDLDAFADELARQGFGNKSITLYDIRAELNHRY 1098
Query: 818 QDWRNQYKEPSQDEEFYMISGETEDTLAE---GRVVQATVRR------------VQGQRA 862
+D R Y+ PS++ F M++ ET ++ + GRV+ R+ ++ +R
Sbjct: 1099 KDLRIPYESPSRERIFTMLTKETPASIGKLMLGRVMHTVYRKPRDPDERERMLPIRDERT 1158
Query: 863 ------ICV---------------------------LESGLAGMLMKEDYSDDWRDSEL- 888
C ++G+ G + Y D DS +
Sbjct: 1159 GQWKCQYCYKPDFSNTNEVWQHIDSCPGQPVGVKVRFDNGITG-FVPNKYISDRPDSFVD 1217
Query: 889 -SDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQ 947
S+++ + C+I + ++ CR S++RN Q+ LD Y+ E++ E
Sbjct: 1218 PSERMQRNQPVYCRILDLDPEKFSATCSCRSSDLRNLNPQN-NKLDDYFDREKAMEDEEN 1276
Query: 948 EKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTL 1007
E+ KE++ + +F +R+I HP F NVT +A ++L E GE+IIRPSS+ S+LT+T
Sbjct: 1277 ERKIKEQKKVQTNFVKRVISHPSFHNVTYRDAERMLQKFEQGEAIIRPSSKSVSHLTVTW 1336
Query: 1008 KVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAM 1067
KV +G+Y H D+ E GK H+ +GKTL IG D FEDLDE++ R+I P+ + + +
Sbjct: 1337 KVAEGIYQHIDVKEEGKQHQ-----FSLGKTLLIGSDEFEDLDEILARHIQPMAAFARDV 1391
Query: 1068 LSYRKFRKGSKAE----VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHE 1123
LS++ F G KAE ++ L E+ PTRI Y S + PG F+L+Y+ HE
Sbjct: 1392 LSHKYFLDGVKAEDRENIEMHLADERKRDPTRIPYTMTPSQDFPGKFVLSYMPVAKVKHE 1451
Query: 1124 YIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
Y + P+GF+FR+++F + ++ +F+ H +P
Sbjct: 1452 YFTVTPEGFRFRQQIFPGLMIMLTWFKEHYREP 1484
>gi|324500474|gb|ADY40224.1| Transcription elongation factor SPT6 [Ascaris suum]
Length = 1345
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 338/1233 (27%), Positives = 583/1233 (47%), Gaps = 155/1233 (12%)
Query: 26 ESTWIY-----NQLLS----GTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLD 76
ES WIY N LS L L + G + + + I L+ + Q +
Sbjct: 154 ESKWIYQYAFDNATLSIQEECCLTLLARADQGDEERRRVAKEAPEKIREALNFIRNQLFE 213
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE S L V ND LW ++ D+KW LQ+R
Sbjct: 214 VPFIAFYRKEYVESCL-------VIND----------------LWKVYQWDEKWCHLQQR 250
Query: 137 KSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
K L K+ Y+ E+ R+ Q + + +T + DV KF L+
Sbjct: 251 KKRLLELMKRMLNYQMENDGA-SGLRVVTEQDM-----NEVHGVQTVEGLMDVSAKFQLY 304
Query: 195 F---PPGEVGVDEGQYKR---------------PKRSTKYSSCSKAGLWEVASKFGYSSE 236
+ P + + Q + R+ KY C + G+ +A++FG + +
Sbjct: 305 YGHEVPKMIDWETTQIMQEDDHEREERETRFRAATRTDKYMLCIQNGIDAMAARFGLTPQ 364
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
Q L K D ++D +E P + A + C F + ++VL GA H+ A ++S EP VR+
Sbjct: 365 QFAENLEW-KRHDVIQDDEE-PLKAAEQYVCQSFPTPESVLSGAVHVVAKQLSREPKVRE 422
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
VR + +S PT G ID H+ +++++KP++ ++L +A+ L
Sbjct: 423 MVRMRYRLRLRISVYPTKKGREEIDESHKLYRRRYIKDKPVKALHHDEYLWYVQAKNCGL 482
Query: 357 LQVT--------IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
L + I+L LN + Y D S ++WN RE + ++ FL+
Sbjct: 483 LNIRLHCDTEDDIRLRRTFLNDFLE--MQPYHKDEFSNVVEMWNKIREEAVTVCINEFLI 540
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE----AAPRVLAC 464
P +E + A+ +++ + + L+ ++ Y + +D + + R+L+
Sbjct: 541 PVFEREVHERLLQEARDYVVKQCTQNLYERIKTATYHVEQDDDDEYRDDDLISGTRILSL 600
Query: 465 CWGPGKPETTFV-MLDSSGEVVDVLFTGCLTLRSQNVRDQQS--KKNDQERLLKFMMDHQ 521
C+ + + +F +++ G+VVD L + +++ ++ K+ D E L KF+ +
Sbjct: 601 CYPEERDQASFCALINHEGQVVDHLRLVHIVKNGNSMKPGEANLKRQDMEYLGKFIEKRR 660
Query: 522 PHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRI 581
PHVV + NL LK DI EI+ + + E + M + + D ++Y +S+
Sbjct: 661 PHVVAICGENLHAYYLKRDI-EIMLRQLAE-----SNNMPVIPVEIVDNEAAKVYMHSKQ 714
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI 641
++ + P +K+AV+LGR L +PL +C +++L PL+ + D+ +
Sbjct: 715 AATEFPDYPLLLKQAVSLGRLLLDPLIEYCHMCNIDQDVLCISYHPLQTEINKDDLMFAL 774
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF-TRKDFV 700
++ N+VG+D++ + + LQF+ GLGPRKAA+L + L + + +R V
Sbjct: 775 SLEFINRVNEVGVDVHRCLEYPYTANMLQFVCGLGPRKAANLLKVLKQNDNLLESRTKLV 834
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
T +G KVF+N GF+++ + + + ++++LD +R+HPE+Y A+++A + D
Sbjct: 835 TLCRMGPKVFMNCAGFIKLDTAKVSERTDAYVEVLDGSRVHPETYEWARKMAVDALEIDD 894
Query: 761 EGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGF 817
D A+E + PD LK LD E R+ NK TLY IR EL H +
Sbjct: 895 TADPTS-------ALEEILQNPDKLKDLDLDAFADELARQGFGNKSITLYDIRAELNHRY 947
Query: 818 QDWRNQYKEPSQDEEFYMISGETEDTLAE---GRVVQATVRR------------VQGQRA 862
+D R Y+ PS++ F M++ ET ++ + GRV+ R+ ++ +R
Sbjct: 948 KDLRIPYESPSRERIFTMLTKETPASIGKLMLGRVMHTVYRKPRDPDERERMLPIRDERT 1007
Query: 863 ------ICV---------------------------LESGLAGMLMKEDYSDDWRDSEL- 888
C ++G+ G + Y D DS +
Sbjct: 1008 GQWKCQYCYKPDFSNTNEVWQHIDSCPGQPVGVKVRFDNGITG-FVPNKYISDRPDSFVD 1066
Query: 889 -SDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQ 947
S+++ + C+I + ++ CR S++RN Q+ LD Y+ E++ E
Sbjct: 1067 PSERMQRNQPVYCRILDLDPEKFSATCSCRSSDLRNLNPQN-NKLDDYFDREKAMEDEEN 1125
Query: 948 EKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTL 1007
E+ KE++ + +F +R+I HP F NVT +A ++L E GE+IIRPSS+ S+LT+T
Sbjct: 1126 ERKIKEQKKVQTNFVKRVISHPSFHNVTYRDAERMLQKFEQGEAIIRPSSKSVSHLTVTW 1185
Query: 1008 KVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAM 1067
KV +G+Y H D+ E GK H+ +GKTL IG D FEDLDE++ R+I P+ + + +
Sbjct: 1186 KVAEGIYQHIDVKEEGKQHQ-----FSLGKTLLIGSDEFEDLDEILARHIQPMAAFARDV 1240
Query: 1068 LSYRKFRKGSKAE----VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHE 1123
LS++ F G KAE ++ L E+ PTRI Y S + PG F+L+Y+ HE
Sbjct: 1241 LSHKYFLDGVKAEDRENIEMHLADERKRDPTRIPYTMTPSQDFPGKFVLSYMPVAKVKHE 1300
Query: 1124 YIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
Y + P+GF+FR+++F + ++ +F+ H +P
Sbjct: 1301 YFTVTPEGFRFRQQIFPGLMIMLTWFKEHYREP 1333
>gi|312083880|ref|XP_003144046.1| SH2 domain-containing protein [Loa loa]
Length = 1508
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 340/1233 (27%), Positives = 578/1233 (46%), Gaps = 157/1233 (12%)
Query: 26 ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---------DDIMRFLDLLHLQKLD 76
E+ WIY + + DL I D I L + Q +
Sbjct: 318 EAKWIYQYAFDNATLSEQEESCLTVLSNLDLRIDERAKIAAEAPDKIKEALKFIRNQLFE 377
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE S L V ND LW ++ D+KW LQ+R
Sbjct: 378 VPFIAFYRKEYVESCL-------VIND----------------LWKVYQWDEKWCHLQQR 414
Query: 137 KSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
K L K+ Y+ E+ R+ Q + + +T + DV KF L+
Sbjct: 415 KKRLLELMKRMLNYQMENDNAAG-MRIVTEQDM-----NEVHGVQTVEGLMDVSTKFQLY 468
Query: 195 FPP------------------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
+ P E E +++ R+ KY C + GL +AS+FG +
Sbjct: 469 YGPEVPKMIDWEKIQNLSEDDPEREAAEMRFRAATRTDKYMLCVQNGLSGMASRFGLTPL 528
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
Q L K D ++D +E P + A + C F + +AVL GA H+ A ++S EP VR+
Sbjct: 529 QFAENLDW-KRHDIVQDDEE-PLKAAEQYVCQSFPTPEAVLTGAIHVVAKQLSREPKVRE 586
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
+R + +S CPT G ID H+ +++R+KP+ ++L +A L
Sbjct: 587 LLRLRYRLRLKISVCPTKKGREEIDENHKLWPRRYIRDKPVASLRHDEYLWYVQAHAGGL 646
Query: 357 LQVT--------IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
L + ++ + L + S+ + Y D S+ WN RE + ++NFLL
Sbjct: 647 LNLKLHCDTEDDVRFEKTMLQEFLSE--QPYHRDEYSRVVDTWNKIREEAVTVCVNNFLL 704
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA----PRVLAC 464
P +EA + AK +++ + + L++++ Y+ +D D E+ RVL+
Sbjct: 705 PVFEREAHERLLQEAKDYVIKQSTQNLYDRIKTAAYRNVHDDDDDDFESGFASGTRVLSI 764
Query: 465 CWGPGKPETTF-VMLDSSGEVVDVLFTGCLT--LRSQNVRDQQSKKNDQERLLKFMMDHQ 521
+ + + +F +LD G+V+D L +T + S+ + K+ D L KF+ +
Sbjct: 765 AYPEERDQASFCALLDQDGQVLDHLRLIHITKSMNSKRPGEADLKRQDMVHLRKFIEKRR 824
Query: 522 PHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRI 581
P V+ + N+ L+ DI ++ ++ E+ + D ++Y +S+
Sbjct: 825 PCVIAICGENMDAYYLRRDIESLL--------HEISGMAKEIPVEIVDNEAAKIYMHSKQ 876
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI 641
+ + P +++AV+LGR L +PL A LC +IL PL++ + +E +
Sbjct: 877 AIAEFPNYPLMLRQAVSLGRLLLDPLIEYAHLCNTDDDILCVSYHPLQSEVNKEELLFAL 936
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF-TRKDFV 700
++ N+VG+D+N + LQF+ GLG RKA L + L + + +R V
Sbjct: 937 SLEFINRVNEVGVDVNRCLEYSHTSYLLQFVCGLGTRKAVHLLKILKQNDNLLESRTKLV 996
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
T +G KVF+N+ GF+++ + + + ++++LD +R+HPE+Y A+++A + D
Sbjct: 997 TLCRMGPKVFMNSAGFIKIDTAKVSERTDAYVEVLDGSRVHPETYEWARKMAVDALEIDD 1056
Query: 761 EGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGF 817
D A+E + PD LK LD +E R+ NK TLY IR EL H +
Sbjct: 1057 AADPTS-------ALEEILQNPDKLKDLDLDAFAEELARQGFGNKSITLYDIRAELNHRY 1109
Query: 818 QDWRNQYKEPSQDEEFYMISGETEDT---LAEGRVVQATVRR------------VQGQRA 862
+D R Y+ PS ++ F M++ ET D+ L GRV+ R+ ++ +R
Sbjct: 1110 KDLRIPYESPSAEKIFTMLTKETSDSIGKLVMGRVMHIVYRKPRDPEERERVPPIRDERT 1169
Query: 863 ------ICV---------------------------LESGLAGMLMKEDYSDDWRDSEL- 888
C +SG+ G + + Y D DS +
Sbjct: 1170 GQWKCQYCYKPDFNNTNEVWQHIDSCPGQPVGVKVRFDSGITGFIPNK-YLSDRPDSFVD 1228
Query: 889 -SDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQ 947
S+++ + C+I + +++ CR S++R + Q+ + D Y+ + + E+
Sbjct: 1229 PSERVRRNQPIYCRILELDPDKFSATCSCRSSDLRGLQPQNSE-FDRYFDKLKYQDDDEK 1287
Query: 948 EKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTL 1007
+K +EK +F +R+I HP F NVT +A ++L E GE+IIRPSS+ S+LT+T
Sbjct: 1288 DKKLREKRKIVTYFVKRVISHPSFHNVTFKDAERMLQKFEQGEAIIRPSSKSVSHLTVTW 1347
Query: 1008 KVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAM 1067
KV DG+Y H DI E GK H+ +GKTL IG + FEDLDE++ R+I P+ + + +
Sbjct: 1348 KVADGIYQHIDIKEEGKQHQ-----FSLGKTLLIGTEEFEDLDEILARHIQPMAALARDV 1402
Query: 1068 LSYRKFRKGSKAE----VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHE 1123
LS++ F G +AE ++ L EK P RI Y S E+PG F+++Y+ HE
Sbjct: 1403 LSHKYFLDGKRAEDRDAIESYLFDEKKRNPQRIPYTLTPSQEYPGKFVVSYLPRNKARHE 1462
Query: 1124 YIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
Y+ + P+GF+FR+++F+ ++ ++++F+ H +P
Sbjct: 1463 YMTVTPEGFRFRQQLFQSLEVVLSWFKVHYREP 1495
>gi|66823563|ref|XP_645136.1| SH2 domain-containing protein [Dictyostelium discoideum AX4]
gi|60473383|gb|EAL71329.1| SH2 domain-containing protein [Dictyostelium discoideum AX4]
Length = 1754
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 334/1161 (28%), Positives = 550/1161 (47%), Gaps = 129/1161 (11%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I + L + L+IPFI Y K D +E TL+ LW
Sbjct: 362 IFKILQFIQRDLLEIPFIYTYEK--------------------DIYEPYFTLQ---ELWN 398
Query: 123 IHDLDKKWLLLQKRKSALQSY---------YKK-----RYEEESRRIYDETRLALNQQLF 168
I DLD+KW ++ K L+ YK R EE +YD Q+
Sbjct: 399 IFDLDEKWAHMKVNKRNLEQIGSNNQQLEPYKSVLLESRSEESISDLYDLF------QMI 452
Query: 169 DSISKSLEAAETEREV----DDVDLKFNLHFPPGEVGVDEGQYKRPKRSTK---YSSCSK 221
+ I K+ + D D K G G R K++ K Y+ +K
Sbjct: 453 NGIQKNTNLLNGSSSLGSGGDGYDDKEG--GSSATQGNTVGGLSRQKKAIKRDLYTIYTK 510
Query: 222 AGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGAR 281
AGL + FG ++++ G L ++ D P MA C ++ VLQ R
Sbjct: 511 AGLSKFLPNFGMTAQEFGQNLMDNYTTNKPRDQMAEPSTMALVHICLEADNKDRVLQATR 570
Query: 282 HMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE 341
+M A EI +P VR VR I+ A ++T PT G ID FH + VK ++EKP FE
Sbjct: 571 YMMAQEIGYDPHVRYSVRMIYRKYAHITTTPTLKGFKEIDVFHPYFTVKSIQEKPAHLFE 630
Query: 342 DAQWLLIQKAEEEKLLQVTIKLPEDSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILK 400
D+Q+LLI KAE+E ++ T+ + E + N + + + YLSDG S Q WN+QR+LI++
Sbjct: 631 DSQYLLILKAEKEGFIKSTMAITEKTHNSVIIPEMESLYLSDGTSAITQQWNEQRKLIIR 690
Query: 401 DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ--------------- 445
+AL+ FL P + KE R+ + A + + E K L +K+ V P++
Sbjct: 691 EALNKFLYPVLEKELRNKLLTEASNRVAFECAKKLEDKIRVAPWRPVSSSSGIGHSNSSV 750
Query: 446 -----RKDNDITPDEEAAP-----------------RVLACCWGPGKPETTFVMLDSSGE 483
R +N + D++ ++L+ CWG K T +L+S GE
Sbjct: 751 LFGGSRANNGYSNDDDEDEDDDEEVDYDRDGNPIPFKILSLCWGSDKIPTMGAVLNSDGE 810
Query: 484 VVDVLFTGCLTLR-SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIY 542
V+ + + R +++++++ K D +RL + ++QP +V++ A + L +++
Sbjct: 811 VLSHIKLDFICDRLGESLKEKKEK--DIKRLEEICQEYQPRLVLVSATEMDSKRLYEEVK 868
Query: 543 EIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRY 602
+ + + R + + L Y E L +SR+ ++ ++ +A+GR
Sbjct: 869 DHLQRWSNGERRIIRKSV--LLNYYSPEIGLSLQTSSRLQ-EEFKEYPPILRHTIAVGRC 925
Query: 603 LQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHR 662
+P+ A+LC EIL KL PL++ + D ++ + ++V N VG+DIN I
Sbjct: 926 ALDPITEYASLCNDHNEILFLKLHPLQDMIGKDYLVKLLHRCFINVVNAVGVDINRMIQC 985
Query: 663 EWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRS 722
+ A LQF+SGLG RKA L SL R G T + + ++ N +GF+++R
Sbjct: 986 RFTSATLQFVSGLGSRKAQMLLNSLFRRGGFVTSRQSLEKVLSQDVIYRNCIGFIQIRER 1045
Query: 723 GQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP 782
A + DLLDDTRIHP SY + +A E ++++ DE IE + RP
Sbjct: 1046 HAADYKA---DLLDDTRIHPTSYPITYRIAAEALDKNL------DERNFHSYIEDIIKRP 1096
Query: 783 DLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGE 839
L LD I+ + R+ LY I++EL + F D R+ Y+EPS D F ++GE
Sbjct: 1097 KKLDRLDLDGFADIIESHEDRPARKLLYFIKKELTNPFADIRHPYEEPSADTIFEWLTGE 1156
Query: 840 TEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILT 899
T +L G +V T R C L++GL G + + SD+ + L G +
Sbjct: 1157 TNQSLRRGTLVTVTTIRTFDNSVKCRLDNGLEGSIPTDCISDNGE----TKSLGRGVTIN 1212
Query: 900 CKIKSIQKNRYQVFLVCRESEMRNNRYQHC-------QNLDPYYHEERSSRQSEQEKARK 952
C++ + K ++ V L C+ S++ + ++ + Y E + EQ K +
Sbjct: 1213 CRVMGVDKYQFTVSLSCKPSDLNPSFWEETIFRELKENGANQYLRLEEVAPPVEQTKRKP 1272
Query: 953 EKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDG 1012
++E K R +VHP + + + EA LS K G+ ++RPSS+G ++T T K D
Sbjct: 1273 KRERRIK----RTVVHPLWHDFSCLEAETYLSDKPIGDVLLRPSSKGHDHITATFKFADS 1328
Query: 1013 VYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLS-YR 1071
++ H DI E K + V +GK+ +G+ ++ LDE++ R+++ L+++L + S
Sbjct: 1329 IFLHHDIKEADK-----PNAVSLGKSFYMGDVKYDSLDEILARHVEYLINNLNEVKSNTA 1383
Query: 1072 KFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1131
++ G++++VD+L+R EK + P I Y FG EHPG L ++ S P HE + + G
Sbjct: 1384 HWKDGNRSDVDDLIREEKKKNPKTIPYYFGYDFEHPGFLTLYHVPSNTPRHEPVLVKADG 1443
Query: 1132 FKFRKRMFEDIDRLVAYFQRH 1152
F RK+++ L+ YF+R+
Sbjct: 1444 FILRKKLYPTYYELIKYFKRN 1464
>gi|393908185|gb|EFO20024.2| SH2 domain-containing protein [Loa loa]
Length = 1432
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 340/1233 (27%), Positives = 578/1233 (46%), Gaps = 157/1233 (12%)
Query: 26 ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---------DDIMRFLDLLHLQKLD 76
E+ WIY + + DL I D I L + Q +
Sbjct: 249 EAKWIYQYAFDNATLSEQEESCLTVLSNLDLRIDERAKIAAEAPDKIKEALKFIRNQLFE 308
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE S L V ND LW ++ D+KW LQ+R
Sbjct: 309 VPFIAFYRKEYVESCL-------VIND----------------LWKVYQWDEKWCHLQQR 345
Query: 137 KSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
K L K+ Y+ E+ R+ Q + + +T + DV KF L+
Sbjct: 346 KKRLLELMKRMLNYQMENDNAAG-MRIVTEQDM-----NEVHGVQTVEGLMDVSTKFQLY 399
Query: 195 FPP------------------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
+ P E E +++ R+ KY C + GL +AS+FG +
Sbjct: 400 YGPEVPKMIDWEKIQNLSEDDPEREAAEMRFRAATRTDKYMLCVQNGLSGMASRFGLTPL 459
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
Q L K D ++D +E P + A + C F + +AVL GA H+ A ++S EP VR+
Sbjct: 460 QFAENLDW-KRHDIVQDDEE-PLKAAEQYVCQSFPTPEAVLTGAIHVVAKQLSREPKVRE 517
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
+R + +S CPT G ID H+ +++R+KP+ ++L +A L
Sbjct: 518 LLRLRYRLRLKISVCPTKKGREEIDENHKLWPRRYIRDKPVASLRHDEYLWYVQAHAGGL 577
Query: 357 LQVT--------IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
L + ++ + L + S+ + Y D S+ WN RE + ++NFLL
Sbjct: 578 LNLKLHCDTEDDVRFEKTMLQEFLSE--QPYHRDEYSRVVDTWNKIREEAVTVCVNNFLL 635
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA----PRVLAC 464
P +EA + AK +++ + + L++++ Y+ +D D E+ RVL+
Sbjct: 636 PVFEREAHERLLQEAKDYVIKQSTQNLYDRIKTAAYRNVHDDDDDDFESGFASGTRVLSI 695
Query: 465 CWGPGKPETTFV-MLDSSGEVVDVLFTGCLT--LRSQNVRDQQSKKNDQERLLKFMMDHQ 521
+ + + +F +LD G+V+D L +T + S+ + K+ D L KF+ +
Sbjct: 696 AYPEERDQASFCALLDQDGQVLDHLRLIHITKSMNSKRPGEADLKRQDMVHLRKFIEKRR 755
Query: 522 PHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRI 581
P V+ + N+ L+ DI ++ ++ E+ + D ++Y +S+
Sbjct: 756 PCVIAICGENMDAYYLRRDIESLL--------HEISGMAKEIPVEIVDNEAAKIYMHSKQ 807
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI 641
+ + P +++AV+LGR L +PL A LC +IL PL++ + +E +
Sbjct: 808 AIAEFPNYPLMLRQAVSLGRLLLDPLIEYAHLCNTDDDILCVSYHPLQSEVNKEELLFAL 867
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF-TRKDFV 700
++ N+VG+D+N + LQF+ GLG RKA L + L + + +R V
Sbjct: 868 SLEFINRVNEVGVDVNRCLEYSHTSYLLQFVCGLGTRKAVHLLKILKQNDNLLESRTKLV 927
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
T +G KVF+N+ GF+++ + + + ++++LD +R+HPE+Y A+++A + D
Sbjct: 928 TLCRMGPKVFMNSAGFIKIDTAKVSERTDAYVEVLDGSRVHPETYEWARKMAVDALEIDD 987
Query: 761 EGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGF 817
D A+E + PD LK LD +E R+ NK TLY IR EL H +
Sbjct: 988 AADPTS-------ALEEILQNPDKLKDLDLDAFAEELARQGFGNKSITLYDIRAELNHRY 1040
Query: 818 QDWRNQYKEPSQDEEFYMISGETEDT---LAEGRVVQATVRR------------VQGQRA 862
+D R Y+ PS ++ F M++ ET D+ L GRV+ R+ ++ +R
Sbjct: 1041 KDLRIPYESPSAEKIFTMLTKETSDSIGKLVMGRVMHIVYRKPRDPEERERVPPIRDERT 1100
Query: 863 ------ICV---------------------------LESGLAGMLMKEDYSDDWRDSEL- 888
C +SG+ G + + Y D DS +
Sbjct: 1101 GQWKCQYCYKPDFNNTNEVWQHIDSCPGQPVGVKVRFDSGITGFIPNK-YLSDRPDSFVD 1159
Query: 889 -SDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQ 947
S+++ + C+I + +++ CR S++R + Q+ + D Y+ + + E+
Sbjct: 1160 PSERVRRNQPIYCRILELDPDKFSATCSCRSSDLRGLQPQNSE-FDRYFDKLKYQDDDEK 1218
Query: 948 EKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTL 1007
+K +EK +F +R+I HP F NVT +A ++L E GE+IIRPSS+ S+LT+T
Sbjct: 1219 DKKLREKRKIVTYFVKRVISHPSFHNVTFKDAERMLQKFEQGEAIIRPSSKSVSHLTVTW 1278
Query: 1008 KVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAM 1067
KV DG+Y H DI E GK H+ +GKTL IG + FEDLDE++ R+I P+ + + +
Sbjct: 1279 KVADGIYQHIDIKEEGKQHQ-----FSLGKTLLIGTEEFEDLDEILARHIQPMAALARDV 1333
Query: 1068 LSYRKFRKGSKAE----VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHE 1123
LS++ F G +AE ++ L EK P RI Y S E+PG F+++Y+ HE
Sbjct: 1334 LSHKYFLDGKRAEDRDAIESYLFDEKKRNPQRIPYTLTPSQEYPGKFVVSYLPRNKARHE 1393
Query: 1124 YIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
Y+ + P+GF+FR+++F+ ++ ++++F+ H +P
Sbjct: 1394 YMTVTPEGFRFRQQLFQSLEVVLSWFKVHYREP 1426
>gi|345481370|ref|XP_003424351.1| PREDICTED: transcription elongation factor SPT6 [Nasonia vitripennis]
Length = 1669
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 346/1278 (27%), Positives = 604/1278 (47%), Gaps = 189/1278 (14%)
Query: 29 WIYNQLLS-GTLPL----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMY 83
WIYNQ T+ + + K+G ++++ I + LD + Q ++PFI+ Y
Sbjct: 313 WIYNQAFERKTISIQDAHLNEEAKERAKKGPQ-TVTK--ITKALDFMRNQHFEVPFISFY 369
Query: 84 RKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSY 143
RKE L L +N+ LW ++ D KW L++RK AL
Sbjct: 370 RKEYVLPELN------IND-----------------LWKVYKYDAKWCQLRQRKEALLVL 406
Query: 144 YK--KRYEEESRRIYDETRLALNQQLFDSIS-KSLEAAETEREVDDVDLKFNLHFP---P 197
++ KRY+E+ + L N +L + K LE +T E++D F L++ P
Sbjct: 407 FRKMKRYQEDFIMKDPDAPLPDNMRLIEEEDVKQLENVQTTEELNDCYHHFMLYYSHEIP 466
Query: 198 GEVGVDEGQYKRPKRSTK------------------------------------------ 215
+ Q K +R +
Sbjct: 467 KMQEIVRKQEKEKRRQERIQKRKQLIAEAEENGEDPPPEDPFEDDDDNEPEETLKQAVRT 526
Query: 216 --YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSS 273
YS C +AGL +A +FG EQ LS E E+E P +A+ + F ++
Sbjct: 527 GPYSICRRAGLESLAKRFGLPPEQYAKNLSEEYQIFEVEQELNEPTAVAAEYVGEKFQTA 586
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR 333
VL+ A+ M A++++ EP VR+ VR ++ + A +S PT G ID H +K+L+
Sbjct: 587 DEVLKAAQLMVAIQLAREPLVRESVRKMYKEKAKISVRPTKQGIKLIDENHPVYIMKYLK 646
Query: 334 EKPLRKFEDAQWLLIQKAEEEKLLQVTIK--LPEDSLNKLFSDCKEHYLSDGVSKSAQLW 391
+KP+R Q+L + AE++KL+ ++ + ++ N K+ Y+ D SK+ Q W
Sbjct: 647 DKPVRDLVGDQFLKLVMAEQDKLITISFSDIIEGNTTNNYVEQMKQLYVRDEFSKNVQDW 706
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
N R ++ AL ++P + KE S++ AK ++ + +N + V PY +
Sbjct: 707 NALRVGSVEMALTKMVIPDLKKELHSMLLNEAKECVMRSCARKAYNWIKVAPYTCE---- 762
Query: 452 TPDEE-------AAPRVLACCWGPGKPETTFV-MLDSSGEVVDVLFTGCLTLRSQNVRDQ 503
PDEE RV+ + P + ++ GE D L L + + RD
Sbjct: 763 FPDEEDEEWDTSKGLRVMGLAYVPDFSIAAYACLIAPDGECTDYLKLPHLLKKKNSYRDT 822
Query: 504 Q--SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV--EEHPRDVGHE 559
+K+ D + F+ +PHVVV+G + + +D+ E I +V E+ P +G E
Sbjct: 823 DKIAKEADVLAIRNFISTKKPHVVVIGGESRDALMIAEDVRECIATLVADEQFP-SIGVE 881
Query: 560 M--DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPG 617
+ +EL+I Y NS + +++A++L R LQ+PL + LC
Sbjct: 882 IMDNELAITYS---------NSNKGISEFRDYPVELRQAISLARRLQDPLVEFSQLCNAD 932
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
EIL K L++ L ++ I V+ N+VG+DIN + + + LQ++ GLG
Sbjct: 933 DEILCLKYHSLQDQLPKEDLLENINLEFVNRVNEVGVDINKTVQQPYSGNLLQYVCGLGA 992
Query: 678 RKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLD 736
RK L + L + + R VT+ +G KVF+N GF+++ + S+ ++++LD
Sbjct: 993 RKGQHLIKMLKQTNQRLENRTQLVTSCHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLD 1052
Query: 737 DTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDRHIK 795
+R+HPE+Y A+++A ++ DDEDA A+E + + P+ LK LD +
Sbjct: 1053 GSRVHPETYEWARKMA-------VDALEYDDEDANPAGALEEILESPERLKDLDLDAFAE 1105
Query: 796 EKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQA 852
E +R+ NK TLY IR EL ++D R Y+ P+ ++ F +++ ET ++ G++++A
Sbjct: 1106 ELERQGFGNKCITLYDIRSELNSRYKDLRIPYQSPTPEKLFDILTKETPESFYIGKLLEA 1165
Query: 853 TV-----RRVQGQR-----------------AICV------------------------- 865
TV R+ +G++ C+
Sbjct: 1166 TVVGISYRKPKGEQLDQANPVRNDETGLWQCPFCLKNEFPELSEVWNHFDAGACPGKATG 1225
Query: 866 ----LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM 921
L++G++G + ++ SD + +++ G+ + C+I I+ +R+ V + S++
Sbjct: 1226 IRLRLDNGISGFIHIKNLSDK-HVTNPEERVRIGNRIHCRIIKIEVDRFGVEATSKSSDL 1284
Query: 922 RNNRYQHCQNLDPYYHEERSSRQS-EQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
+ + DPYY E + + +E+ +K K+ ++ + R+I+HP F+N+T +A
Sbjct: 1285 ADKNQEWRPQKDPYYDTETEGKDNLVEEETKKVKQ--RQMYVTRVIIHPSFRNITYADAE 1342
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
KL+ GE+IIRPSS+G +LT+T KV D V+ H D+ E GK++K +G++L
Sbjct: 1343 KLMKTMPQGEAIIRPSSKGDDHLTVTWKVTDDVHQHIDVREEGKENK-----YSLGRSLW 1397
Query: 1041 IGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRK-----FRKGSKAEVDELLRIEKAEFPTR 1095
IG + FEDLDE++ R+IDP+ + ++ +++++ G K + +E+L+ K++ +
Sbjct: 1398 IGNEEFEDLDEILARHIDPMAASVRELMNFKSDYYVPHVMGMKDKAEEILKDLKSKNMNK 1457
Query: 1096 IVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1155
I Y S +PG F+L+Y+ HE+I + P GF+FRK F L+ +F++H +D
Sbjct: 1458 IHYIISPSKNYPGKFLLSYLPRNRCGHEFITVIPDGFRFRKNSFPRFSDLMGWFKKHYND 1517
Query: 1156 -PQGDSAPSIRSVAAMVP 1172
G PS V P
Sbjct: 1518 RDSGVVTPSTPRVYHTTP 1535
>gi|256090490|ref|XP_002581221.1| suppressor of ty [Schistosoma mansoni]
Length = 1408
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 312/1031 (30%), Positives = 504/1031 (48%), Gaps = 105/1031 (10%)
Query: 208 KRPKRST-KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
+R R+T Y +AGL ++ +FG S+ Q + + + +++ P + A +F
Sbjct: 393 QRQARATASYEVAKRAGLGDLVQRFGLSASQFAENVQDQYLRHDVDQCPMLPIDAAGDFL 452
Query: 267 CAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQF 326
F +S+ L AR+M A EIS EP VRK +R +F AV+S PT G ID H
Sbjct: 453 SPQFPNSELALSAARYMLAFEISREPLVRKMMRQMFNLQAVISMRPTERGAKHIDESHPL 512
Query: 327 AGVKWLREKPLRKFE-DAQWLLIQKAEEEKLLQVTIKLPEDSLN--KLFSDCKEHYLSDG 383
+K+L KP+ + +L I AE +KL+Q I +P + + L + + + D
Sbjct: 513 FQIKYLSNKPVTDLMGNVLFLHIHNAERDKLVQYEIHVPTEQIRGLSLVDELQRFFYQDE 572
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
S Q WN+QR L+LK A + F+ P +V+E R + ++ +L K L+N + +GP
Sbjct: 573 FSSLVQAWNEQRNLVLKQAAEEFIFPGLVRELRQKLLNESQQAVLRMCAKKLFNYLRIGP 632
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG---------------KPETTFVMLDSSGEVVDVL 488
Y + + R W G K T V LD +GEVVD L
Sbjct: 633 YPPDGHHFHTSGDIDSRSSGAVWPKGARVLSLALKNEDDSRKSMVTAVQLDCNGEVVDFL 692
Query: 489 -FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFK 547
F G L R ++ K+ D +RL FM+ H+P V V+G L++DI ++ +
Sbjct: 693 HFHGLLVSRRAPEDMKKLKEEDMQRLSTFMVKHKPQVCVIGCDCRKALFLQEDIQNLVNE 752
Query: 548 MVEEHPRDVGH-EM--DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQ 604
+ E H E+ ELSIV+ +SR S D +++A++LGR LQ
Sbjct: 753 LANERRLLRIHVELMETELSIVFA--------LSSRASFDLPISYPLLLRQAISLGRRLQ 804
Query: 605 NPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+PL A L EIL + PL++ L D +E ++ N+VG+D+N +
Sbjct: 805 DPLFEFAQLVTIENEILGIRWHPLQDSLPRDMLLRALEIEFINRVNEVGVDVNRCLSHPH 864
Query: 665 QFAPLQFISGLGPRKAASLQRSLVRAGAIFT-RKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+QFISGLGPRK + + L T R VT G +V +N GF+++ S
Sbjct: 865 TAGVIQFISGLGPRKGLHMLKILKHKKTHLTNRMQLVTMIEFGPRVVINCAGFIKIDTSS 924
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPD 783
+ +DLLD TR+HPESY LA+++A + D + +E +A+E + P
Sbjct: 925 VRDLDADDVDLLDSTRVHPESYDLAKKMAVDALEYD-----DTEECDPTVALEEIVHSPA 979
Query: 784 LLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
L+ LD +E KR+ +K TLY IR+EL + ++D+R Y+ + + F M++ ET
Sbjct: 980 RLRELDLDAFAEELKRQEHGDKHITLYDIRKELNNRYRDYREAYQSANPESIFSMVTHET 1039
Query: 841 EDTL-----AEGRVVQATVRRVQGQRA--------------ICV---------------- 865
+TL E RV+ RR + ++ +C
Sbjct: 1040 PETLHVGRLVECRVLSVATRRPRPEQLDNANPTKNEINGLWMCPFCQQDNFQLLNHVWSH 1099
Query: 866 ----------------LESGLAGML-MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
L++G+ G + +K S D +L ++ G ++ C++ I
Sbjct: 1100 FDNNECPGQPVGLRVQLDNGIDGFIPLKFMDSPD----KLFERTQPGSLVQCRVTKIDIT 1155
Query: 909 RYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKH-FKERLIV 967
R+ V L C+ +E+++ R+ D +Y E+ + E K AK + + RLI
Sbjct: 1156 RFNVELTCKSAELKDERHIWRPRQDAFYDFEKEEKDLRSEAEAMAKAKAKTNPYMSRLIF 1215
Query: 968 HPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHK 1027
HP F+N++ D+ + EPG IIRPS +G +LT++ K+ DG+ H D+ E K +
Sbjct: 1216 HPYFKNISYDQLAAMEPELEPGAIIIRPSRKGTDHLTVSWKIDDGIMQHIDVSEKEKSNS 1275
Query: 1028 DIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDEL 1084
+GK L IG++ FEDLDE+V R++ P+ S ++ +++Y+ +R G +A+++ L
Sbjct: 1276 -----FSLGKLLIIGDEEFEDLDEIVARHVQPMASLVRDVMTYKYYRDSSGGDRAQLNAL 1330
Query: 1085 LRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDR 1144
L+ EK+ P RI Y + E PG FIL Y+ + NPH E + P+GFKFR+ +F +DR
Sbjct: 1331 LQHEKSLNPDRIPYFLSSTKERPGYFILAYLPNKNPHFELFSIRPEGFKFRQLIFPTLDR 1390
Query: 1145 LVAYFQRHIDD 1155
++ +F+ H +D
Sbjct: 1391 MITWFKEHYND 1401
>gi|24640080|ref|NP_651962.2| Spt6 [Drosophila melanogaster]
gi|74872611|sp|Q9W420.1|SPT6H_DROME RecName: Full=Transcription elongation factor SPT6
gi|7290693|gb|AAF46140.1| Spt6 [Drosophila melanogaster]
Length = 1831
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 355/1323 (26%), Positives = 605/1323 (45%), Gaps = 200/1323 (15%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P +G +D E+ WIY + Q S ++ + + I + L
Sbjct: 295 LREVPVTPVPEGSDELDLEAEWIYKYAFCKHT-VSEQEKPESREKMRKPPTTVNKIKQTL 353
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 354 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYYD 390
Query: 128 KKWLLLQKRKSALQSYYKKRYE--------EESRRIYDETRLALNQQLFDSISKSLEAAE 179
W L +RK L+ ++K + + + + D+ RL L DS + L +
Sbjct: 391 GIWCQLNERKRKLKVLFEKMRQFQLDTLCADTDQPVPDDVRLIL-----DSDFERLADVQ 445
Query: 180 TEREVDDVDLKFNLHFP----------------------------PGEVGVDEG------ 205
+ E+ DV + F L++ E G D
Sbjct: 446 SMEELKDVHMYFLLNYSHELPRMQAEQRRKAIQERREAKARRQAAAAENGDDAAEAIVVP 505
Query: 206 -------------QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
Q K+ S+ Y+ KAG+ A FG + EQ L +E+
Sbjct: 506 EPEDDDDPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEIT 565
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
P E+A + F ++ V+ A+++ A +++ EP +RK +R ++ D A ++ P
Sbjct: 566 QESIGPTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRP 625
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL- 371
T +G ID +K++ +KP+ Q++ + AEEEKLL++T L E N
Sbjct: 626 TKNGMVLIDENSPVYSMKYVAKKPVSDLFGDQFIKLMMAEEEKLLEITF-LEEFEGNACA 684
Query: 372 -------FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
+ K Y D +K Q WN R ++ AL +++P ++KE RS + A+
Sbjct: 685 NGTPGDYVEESKALYQLDQFAKHVQEWNKLRAECVQLALQKWVIPDLIKELRSTLHEEAQ 744
Query: 425 SWLLMEYGKALWNKVSVGPYQRKDNDITPD---EEAAP----RVLACCWGPGKPETTFVM 477
++L L+ + V PY+ + + PD EE + RVL + P F
Sbjct: 745 QFVLRSCTGKLYKWLKVAPYKPQ---LPPDFGYEEWSTLRGIRVLGLAYDPDHSVAAFCA 801
Query: 478 LDS-SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSC 534
+ + G++ D L + R S N+ ++ K D +L F+ +PH+VV+GA +
Sbjct: 802 VTTVEGDISDYLRLPNILKRKNSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGAESRDA 861
Query: 535 TSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
+++ DI EI+ H + + + + D L ++Y NS+ +K
Sbjct: 862 QNIQADIKEIL------HELETSEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLLK 915
Query: 595 RAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGL 654
+A +L R +Q+PL + LC EIL + PL+ + ++ + ++ T++VGL
Sbjct: 916 QAASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGL 975
Query: 655 DINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNA 713
DINL + LQ+I GLGPRK +L + L ++ + R VT LG +VF+N
Sbjct: 976 DINLMVQNSRTINLLQYICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINC 1035
Query: 714 VGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM 773
GF+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E
Sbjct: 1036 SGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAG 1089
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
A+E + + P+ LK LD E +R+ +K TLY IR EL ++D+R Y +PS +
Sbjct: 1090 ALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAE 1149
Query: 831 EEFYMISGETEDTLAEGRVVQA-----TVRRVQG-----------------QRAIC---- 864
E F M++ ET D+ G+ V A T RR QG Q C
Sbjct: 1150 ELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLDSANPVRLDSNESWQCPFCHKDD 1209
Query: 865 -------------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDIL 898
LE+GL G + ++ SD R+ E +++ ++
Sbjct: 1210 FPELSEVWNHFDANACPGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPE--ERVRVSQMI 1267
Query: 899 TCKIKSIQKNRYQVFLVCRESEMR--NNRYQ-HCQNLDPYYHEERSSRQSEQEKARKEKE 955
+I I +R+ V R ++++ NN ++ N Y EE+ +R+ KAR
Sbjct: 1268 HVRIIKIDIDRFSVECSSRTADLKDVNNEWRPRRDNYYDYVTEEQDNRKVSDAKARA--- 1324
Query: 956 LAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYA 1015
L +K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D ++
Sbjct: 1325 LKRKIYARRVIAHPSFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVADDIFQ 1384
Query: 1016 HKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR- 1074
H D+ E GK++ +G++L IG + FEDLDE++ R+I P+ + ++ Y+ ++
Sbjct: 1385 HIDVREEGKEND-----FSLGRSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKP 1439
Query: 1075 ---KGSKAEVD---ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLY 1128
G + E D +LLR EKA P +I Y F S PG F+L+Y+ T HEY+ +
Sbjct: 1440 NMVTGDENERDVMEKLLREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVM 1499
Query: 1129 PKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP---MRSPANGGSTASA 1185
P+G++FR ++F+ ++ L+ +F+ H DP + P+ S + + P MR P S++
Sbjct: 1500 PEGYRFRGQIFDTVNSLLRWFKEHWLDPT--ATPASASASNLTPLHLMRPPPTISSSSQT 1557
Query: 1186 GSG 1188
G
Sbjct: 1558 SLG 1560
>gi|353231207|emb|CCD77625.1| putative suppressor of ty [Schistosoma mansoni]
Length = 1386
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 312/1031 (30%), Positives = 503/1031 (48%), Gaps = 105/1031 (10%)
Query: 208 KRPKRST-KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
+R R+T Y +AGL ++ +FG S+ Q + + + +++ P + A +F
Sbjct: 371 QRQARATASYEVAKRAGLGDLVQRFGLSASQFAENVQDQYLRHDVDQCPMLPIDAAGDFL 430
Query: 267 CAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQF 326
F +S+ L AR+M A EIS EP VRK +R +F AV+S PT G ID H
Sbjct: 431 SPQFPNSELALSAARYMLAFEISREPLVRKMMRQMFNLQAVISMRPTERGAKHIDESHPL 490
Query: 327 AGVKWLREKPLRKFE-DAQWLLIQKAEEEKLLQVTIKLPEDSLN--KLFSDCKEHYLSDG 383
+K+L KP+ + +L I AE +KL+Q I +P + + L + + + D
Sbjct: 491 FQIKYLSNKPVTDLMGNVLFLHIHNAERDKLVQYEIHVPTEQIRGLSLVDELQRFFYQDE 550
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
S Q WN+QR L+LK A + F+ P +V+E R + ++ +L K L+N + +GP
Sbjct: 551 FSSLVQAWNEQRNLVLKQAAEEFIFPGLVRELRQKLLNESQQAVLRMCAKKLFNYLRIGP 610
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG---------------KPETTFVMLDSSGEVVDVL 488
Y + + R W G K T V LD +GEVVD L
Sbjct: 611 YPPDGHHFHTSGDIDSRSSGAVWPKGARVLSLALKNEDDSRKSMVTAVQLDCNGEVVDFL 670
Query: 489 -FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFK 547
F G L R ++ K+ D +RL FM+ H+P V V+G L++DI ++ +
Sbjct: 671 HFHGLLVSRRAPEDMKKLKEEDMQRLSTFMVKHKPQVCVIGCDCRKALFLQEDIQNLVNE 730
Query: 548 MVEEHPRDVGH-EM--DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQ 604
+ E H E+ ELSIV+ +SR S D +++A++LGR LQ
Sbjct: 731 LANERRLLRIHVELMETELSIVFA--------LSSRASFDLPISYPLLLRQAISLGRRLQ 782
Query: 605 NPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+PL A L EIL + PL++ L D +E ++ N+VG+D+N +
Sbjct: 783 DPLFEFAQLVTIENEILGIRWHPLQDSLPRDMLLRALEIEFINRVNEVGVDVNRCLSHPH 842
Query: 665 QFAPLQFISGLGPRKAASLQRSLVRAGAIFT-RKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+QFISGLGPRK + + L T R VT G +V +N GF+++ S
Sbjct: 843 TAGVIQFISGLGPRKGLHMLKILKHKKTHLTNRMQLVTMIEFGPRVVINCAGFIKIDTSS 902
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPD 783
+ +DLLD TR+HPESY LA+++A + D + +E +A+E + P
Sbjct: 903 VRDLDADDVDLLDSTRVHPESYDLAKKMAVDALEYD-----DTEECDPTVALEEIVHSPA 957
Query: 784 LLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
L+ LD +E KR+ +K TLY IR+EL + ++D+R Y+ + + F M++ ET
Sbjct: 958 RLRELDLDAFAEELKRQEHGDKHITLYDIRKELNNRYRDYREAYQSANPESIFSMVTHET 1017
Query: 841 EDTL-----AEGRVVQATVRRVQGQRA--------------ICV---------------- 865
+TL E RV+ RR + ++ +C
Sbjct: 1018 PETLHVGRLVECRVLSVATRRPRPEQLDNANPTKNEINGLWMCPFCQQDNFQLLNHVWSH 1077
Query: 866 ----------------LESGLAGML-MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
L++G+ G + +K S D +L ++ G ++ C++ I
Sbjct: 1078 FDNNECPGQPVGLRVQLDNGIDGFIPLKFMDSPD----KLFERTQPGSLVQCRVTKIDIT 1133
Query: 909 RYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKH-FKERLIV 967
R+ V L C+ +E+++ R+ D +Y E+ + E K AK + + RLI
Sbjct: 1134 RFNVELTCKSAELKDERHIWRPRQDAFYDFEKEEKDLRSEAEAMAKAKAKTNPYMSRLIF 1193
Query: 968 HPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHK 1027
HP F+N++ D + EPG IIRPS +G +LT++ K+ DG+ H D+ E K +
Sbjct: 1194 HPYFKNISYDHLAAMEPELEPGAIIIRPSRKGTDHLTVSWKIDDGIMQHIDVSEKEKSNS 1253
Query: 1028 DIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDEL 1084
+GK L IG++ FEDLDE+V R++ P+ S ++ +++Y+ +R G +A+++ L
Sbjct: 1254 -----FSLGKLLIIGDEEFEDLDEIVARHVQPMASLVRDVMTYKYYRDSSGGDRAQLNAL 1308
Query: 1085 LRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDR 1144
L+ EK+ P RI Y + E PG FIL Y+ + NPH E + P+GFKFR+ +F +DR
Sbjct: 1309 LQHEKSLNPDRIPYFLSSTKERPGYFILAYLPNKNPHFELFSIRPEGFKFRQLIFPTLDR 1368
Query: 1145 LVAYFQRHIDD 1155
++ +F+ H +D
Sbjct: 1369 MITWFKEHYND 1379
>gi|6491997|gb|AAF14114.1|AF104400_1 SPT6 protein [Drosophila melanogaster]
Length = 1831
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 355/1323 (26%), Positives = 605/1323 (45%), Gaps = 200/1323 (15%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P +G +D E+ WIY + Q S ++ + + I + L
Sbjct: 295 LREVPVTPVPEGSDELDLEAEWIYKYAFCKHT-VSEQEKPESREKMRKPPTTVNKIKQTL 353
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 354 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYYD 390
Query: 128 KKWLLLQKRKSALQSYYKKRYE--------EESRRIYDETRLALNQQLFDSISKSLEAAE 179
W L +RK L+ ++K + + + + D+ RL L DS + L +
Sbjct: 391 GIWCQLNERKRKLKVLFEKMRQFQLDTLCADTDQPVPDDVRLIL-----DSDFERLADVQ 445
Query: 180 TEREVDDVDLKFNLHFP----------------------------PGEVGVDEG------ 205
+ E+ DV + F L++ E G D
Sbjct: 446 SMEELKDVHMYFLLNYSHELPRMQAEQRRKAIQERREAKARRQAAAAENGDDAAEAIVVP 505
Query: 206 -------------QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
Q K+ S+ Y+ KAG+ A FG + EQ L +E+
Sbjct: 506 EPEDDDDPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEIT 565
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
P E+A + F ++ V+ A+++ A +++ EP +RK +R ++ D A ++ P
Sbjct: 566 QESIGPTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRP 625
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL- 371
T +G ID +K++ +KP+ Q++ + AEEEKLL++T L E N
Sbjct: 626 TKNGMVLIDENSPVYSMKYVAKKPVSDLFGDQFIKLMMAEEEKLLEITF-LEEFEGNACA 684
Query: 372 -------FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
+ K Y D +K Q WN R ++ AL +++P ++KE RS + A+
Sbjct: 685 NGTPGDYVEESKALYQLDQFAKHVQEWNKLRAECVQLALQKWVIPDLIKELRSTLHEEAQ 744
Query: 425 SWLLMEYGKALWNKVSVGPYQRKDNDITPD---EEAAP----RVLACCWGPGKPETTFVM 477
++L L+ + V PY+ + + PD EE + RVL + P F
Sbjct: 745 QFVLRSCTGKLYKWLKVAPYKPQ---LPPDFGYEEWSTLRGIRVLGLAYDPDHSVAAFCA 801
Query: 478 LDS-SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSC 534
+ + G++ D L + R S N+ ++ K D +L F+ +PH+VV+GA +
Sbjct: 802 VTTVEGDISDYLRLPNILKRKNSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGAESRDA 861
Query: 535 TSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
+++ DI EI+ H + + + + D L ++Y NS+ +K
Sbjct: 862 QNIQADIKEIL------HELETSEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLLK 915
Query: 595 RAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGL 654
+A +L R +Q+PL + LC EIL + PL+ + ++ + ++ T++VGL
Sbjct: 916 QAASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGL 975
Query: 655 DINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNA 713
DINL + LQ+I GLGPRK +L + L ++ + R VT LG +VF+N
Sbjct: 976 DINLMVQNSRTINLLQYICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINC 1035
Query: 714 VGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM 773
GF+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E
Sbjct: 1036 SGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAG 1089
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
A+E + + P+ LK LD E +R+ +K TLY IR EL ++D+R Y +PS +
Sbjct: 1090 ALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAE 1149
Query: 831 EEFYMISGETEDTLAEGRVVQA-----TVRRVQG-----------------QRAIC---- 864
E F M++ ET D+ G+ V A T RR QG Q C
Sbjct: 1150 ELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLDSANPVRIDSNESWQCPFCHKDD 1209
Query: 865 -------------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDIL 898
LE+GL G + ++ SD R+ E +++ ++
Sbjct: 1210 FPELSEVWNHFDANACPGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPE--ERVRVSQMI 1267
Query: 899 TCKIKSIQKNRYQVFLVCRESEMR--NNRYQ-HCQNLDPYYHEERSSRQSEQEKARKEKE 955
+I I +R+ V R ++++ NN ++ N Y EE+ +R+ KAR
Sbjct: 1268 HVRIIKIDIDRFSVECSSRTADLKDVNNEWRPRRDNYYDYVTEEQDNRKVSDAKARA--- 1324
Query: 956 LAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYA 1015
L +K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D ++
Sbjct: 1325 LKRKIYARRVIAHPSFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVADDIFQ 1384
Query: 1016 HKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR- 1074
H D+ E GK++ +G++L IG + FEDLDE++ R+I P+ + ++ Y+ ++
Sbjct: 1385 HIDVREEGKEND-----FSLGRSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKP 1439
Query: 1075 ---KGSKAEVD---ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLY 1128
G + E D +LLR EKA P +I Y F S PG F+L+Y+ T HEY+ +
Sbjct: 1440 NMVTGDENERDVMEKLLREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVM 1499
Query: 1129 PKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP---MRSPANGGSTASA 1185
P+G++FR ++F+ ++ L+ +F+ H DP + P+ S + + P MR P S++
Sbjct: 1500 PEGYRFRGQIFDTVNSLLRWFKEHWLDPT--ATPASASASNLTPLHLMRPPPTISSSSQT 1557
Query: 1186 GSG 1188
G
Sbjct: 1558 SLG 1560
>gi|6491999|gb|AAF14115.1| SPT6 protein [Drosophila melanogaster]
Length = 1827
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 355/1323 (26%), Positives = 605/1323 (45%), Gaps = 200/1323 (15%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P +G +D E+ WIY + Q S ++ + + I + L
Sbjct: 291 LREVPVTPVPEGSDELDLEAEWIYKYAFCKHT-VSEQEKPESREKMRKPPTTVNKIKQTL 349
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 350 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYYD 386
Query: 128 KKWLLLQKRKSALQSYYKKRYE--------EESRRIYDETRLALNQQLFDSISKSLEAAE 179
W L +RK L+ ++K + + + + D+ RL L DS + L +
Sbjct: 387 GIWCQLNERKRKLKVLFEKMRQFQLDTLCADTDQPVPDDVRLIL-----DSDFERLADVQ 441
Query: 180 TEREVDDVDLKFNLHFP----------------------------PGEVGVDEG------ 205
+ E+ DV + F L++ E G D
Sbjct: 442 SMEELKDVHMYFLLNYSHELPRMQAEQRRKAIQERREAKARRQAAAAENGDDAAEAIVVP 501
Query: 206 -------------QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
Q K+ S+ Y+ KAG+ A FG + EQ L +E+
Sbjct: 502 EPEDDDDPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEIT 561
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
P E+A + F ++ V+ A+++ A +++ EP +RK +R ++ D A ++ P
Sbjct: 562 QESIGPTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRP 621
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL- 371
T +G ID +K++ +KP+ Q++ + AEEEKLL++T L E N
Sbjct: 622 TKNGMVLIDENSPVYSMKYVAKKPVSDLFGDQFIKLMMAEEEKLLEITF-LEEFEGNACA 680
Query: 372 -------FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
+ K Y D +K Q WN R ++ AL +++P ++KE RS + A+
Sbjct: 681 NGTPGDYVEESKALYQLDQFAKHVQEWNKLRAECVQLALQKWVIPDLIKELRSTLHEEAQ 740
Query: 425 SWLLMEYGKALWNKVSVGPYQRKDNDITPD---EEAAP----RVLACCWGPGKPETTFVM 477
++L L+ + V PY+ + + PD EE + RVL + P F
Sbjct: 741 QFVLRSCTGKLYKWLKVAPYKPQ---LPPDFGYEEWSTLRGIRVLGLAYDPDHSVAAFCA 797
Query: 478 LDS-SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSC 534
+ + G++ D L + R S N+ ++ K D +L F+ +PH+VV+GA +
Sbjct: 798 VTTVEGDISDYLRLPNILKRKNSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGAESRDA 857
Query: 535 TSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
+++ DI EI+ H + + + + D L ++Y NS+ +K
Sbjct: 858 QNIQADIKEIL------HELETSEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLLK 911
Query: 595 RAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGL 654
+A +L R +Q+PL + LC EIL + PL+ + ++ + ++ T++VGL
Sbjct: 912 QAASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGL 971
Query: 655 DINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNA 713
DINL + LQ+I GLGPRK +L + L ++ + R VT LG +VF+N
Sbjct: 972 DINLMVQNSRTINLLQYICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINC 1031
Query: 714 VGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM 773
GF+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E
Sbjct: 1032 SGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAG 1085
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
A+E + + P+ LK LD E +R+ +K TLY IR EL ++D+R Y +PS +
Sbjct: 1086 ALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAE 1145
Query: 831 EEFYMISGETEDTLAEGRVVQA-----TVRRVQG-----------------QRAIC---- 864
E F M++ ET D+ G+ V A T RR QG Q C
Sbjct: 1146 ELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLDSANPVRIDSNESWQCPFCHKDD 1205
Query: 865 -------------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDIL 898
LE+GL G + ++ SD R+ E +++ ++
Sbjct: 1206 FPELSEVWNHFDANACPGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPE--ERVRVSQMI 1263
Query: 899 TCKIKSIQKNRYQVFLVCRESEMR--NNRYQ-HCQNLDPYYHEERSSRQSEQEKARKEKE 955
+I I +R+ V R ++++ NN ++ N Y EE+ +R+ KAR
Sbjct: 1264 HVRIIKIDIDRFSVECSSRTADLKDVNNEWRPRRDNYYDYVTEEQDNRKVSDAKARA--- 1320
Query: 956 LAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYA 1015
L +K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D ++
Sbjct: 1321 LKRKIYARRVIAHPSFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVADDIFQ 1380
Query: 1016 HKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR- 1074
H D+ E GK++ +G++L IG + FEDLDE++ R+I P+ + ++ Y+ ++
Sbjct: 1381 HIDVREEGKEND-----FSLGRSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKP 1435
Query: 1075 ---KGSKAEVD---ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLY 1128
G + E D +LLR EKA P +I Y F S PG F+L+Y+ T HEY+ +
Sbjct: 1436 NMVTGDENERDVMEKLLREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVM 1495
Query: 1129 PKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP---MRSPANGGSTASA 1185
P+G++FR ++F+ ++ L+ +F+ H DP + P+ S + + P MR P S++
Sbjct: 1496 PEGYRFRGQIFDTVNSLLRWFKEHWLDPT--ATPASASASNLTPLHLMRPPPTISSSSQT 1553
Query: 1186 GSG 1188
G
Sbjct: 1554 SLG 1556
>gi|198469708|ref|XP_001355099.2| GA11490 [Drosophila pseudoobscura pseudoobscura]
gi|198146997|gb|EAL32155.2| GA11490 [Drosophila pseudoobscura pseudoobscura]
Length = 1841
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 345/1314 (26%), Positives = 605/1314 (46%), Gaps = 200/1314 (15%)
Query: 9 LRKALAGPPTDGE-SIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P +G + DE+ WIY + + Q+ A S ++ + I + L
Sbjct: 306 LRQVPVTPVPEGSLELDDEAEWIYQYAFCKST-VSEQQKADSREKMRKPPTTVKKIKQTL 364
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 365 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYFD 401
Query: 128 KKWLLLQKRKSALQSYYKKRYE--------EESRRIYDETRLALNQQLFDSISKSLEAAE 179
++W L +RK L++ ++K + + + I D+ RL L DS + L +
Sbjct: 402 ERWCQLNERKRKLKALFEKMRQFQLDTLCADPDKPIPDDVRLML-----DSDFERLNDVQ 456
Query: 180 TEREVDDVDLKFNLHFP----------------------------PGEVGVD-------- 203
+ E+ DV + F L++ E G D
Sbjct: 457 SMEELKDVHMYFLLNYSHELPKMQAEQRRKLLQERRDDRARRKAAAAENGDDLDTVPVEV 516
Query: 204 -----------EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
+ Q K+ S+ Y+ KAG+ A FG + EQ L +E+
Sbjct: 517 DDDDDPELLLQDEQLKQAPNSSPYAVFRKAGICGFAKHFGLTPEQFAENLRDNYQRNEVT 576
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
P E+A + F +++ V+ A+++ A +++ EP +RK +R ++ D A + P
Sbjct: 577 QESLGPLELAKQYLSPRFMTTEEVMHAAKYVVARQLAQEPLLRKTMREVYFDRARIDIRP 636
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK-- 370
T +G ID +K++ +KP+ Q++ + AEEEKLL++T L E N
Sbjct: 637 TKNGMVLIDENSPVYSMKYVAKKPVGDLFGDQFIKLLMAEEEKLLEITF-LEEFEGNANA 695
Query: 371 ------LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
+ K Y D SK WN R ++ AL +++P ++KE R+ + A+
Sbjct: 696 NGPPGDYVEEAKALYNLDQFSKHVLEWNALRAECVQLALQKWVIPDLIKELRATLHEEAQ 755
Query: 425 SWLLMEYGKALWNKVSVGPYQRK-DNDITPDEEAA---PRVLACCWGPGKPETTFVMLDS 480
++L L+ + V PY+ + D D+ + RVL + P F + +
Sbjct: 756 QFVLRSCTAKLYKWLKVAPYKPELPQDYKYDDWSTLRGIRVLGLAYDPDHSVAAFCAVTT 815
Query: 481 -SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
G++ D L + R S N ++ K D +L +F+ +PH+VV+GA + +
Sbjct: 816 VEGDISDYLRLPNILKRKSSHNAEEKGQKLADLRKLSEFIKMKKPHIVVIGAESRDAQMI 875
Query: 538 KDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAV 597
+ DI EI+ ++ + + + + D L ++Y NS+ +K+AV
Sbjct: 876 QTDIKEILKEL------ETTEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPQLKQAV 929
Query: 598 ALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDIN 657
+L R +Q+PL + LC EIL + PL+ + D + ++ T++VGLDIN
Sbjct: 930 SLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPRDMLLEYLSLEFINRTSEVGLDIN 989
Query: 658 LAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGF 716
+ + LQ+ GLGPRK +L + L ++ + R VT LG KVF+N GF
Sbjct: 990 MMVQNSRTVNLLQYTCGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPKVFINCSGF 1049
Query: 717 LRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIE 776
+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E A+E
Sbjct: 1050 IKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAGALE 1103
Query: 777 HVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEF 833
+ + P+ LK LD E +R+ +K TLY IR EL ++D+R+ +++PS +E F
Sbjct: 1104 EILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRSPFQKPSAEELF 1163
Query: 834 YMISGETEDTLAEGRVVQA-----TVRRVQGQR-----------------AIC------- 864
+++ ET D+ G+ V A T RR QG++ C
Sbjct: 1164 DLLTKETPDSFYVGKCVTAMVTGFTYRRPQGEQLDNANPVRNETTGSWQCPFCHKDDFPE 1223
Query: 865 ----------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILTCK 901
L++GL G + ++ SD R+ E +++ ++ +
Sbjct: 1224 LSEVWNHFDANSCPGQASGVRVRLDNGLPGFIHIKNLSDKQVRNPE--ERVRVAQMIHVR 1281
Query: 902 IKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYH---EERSSRQSEQEKARKEKELAK 958
I I +R+ V + +++++ + D +Y EE +R+ KA K L +
Sbjct: 1282 IIKIDIDRFSVDCSSKTADLKDVNNEWRPRRDAFYDFVTEELDNRKVTDAKA---KALKR 1338
Query: 959 KHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKD 1018
K + R+I HPCF N + E + +L+ + GE +RPSS+ ++LT T KV D +Y H D
Sbjct: 1339 KTYARRVIAHPCFFNKSYAEVIAMLAEADQGEVAMRPSSKSAAHLTATWKVADDIYQHID 1398
Query: 1019 IIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSK 1078
+ E GK++ +G++L IG + FEDLDE++ RYI+P+ + ++ Y+ ++K +
Sbjct: 1399 VREEGKEND-----YSLGRSLWIGTEEFEDLDEIIARYINPMACAARELIQYKYYKKNAT 1453
Query: 1079 AE-------VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1131
+++LLR EKA+ P +I Y F S PG F+L+Y+ T EY+ + P+G
Sbjct: 1454 PANGNEREFMEQLLRDEKAKDPKKIHYFFTASKTIPGKFLLSYLPKTKARTEYVTVMPEG 1513
Query: 1132 FKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASA 1185
++FR ++F+ ++ L+ +F+ H DP A M +P +G SA
Sbjct: 1514 YRFRGQVFDSVNSLLRWFKEHWLDPTASPA-----------MNTPMHGMRPPSA 1556
>gi|209863152|gb|ACI88734.1| RE11071p [Drosophila melanogaster]
Length = 1831
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 355/1323 (26%), Positives = 604/1323 (45%), Gaps = 200/1323 (15%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P +G +D E+ WIY + Q S ++ + + I + L
Sbjct: 295 LREVPVTPVPEGSDELDLEAEWIYKYAFCKHT-VSEQEKPESREKMRKPPTTVNKIKQTL 353
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 354 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYYD 390
Query: 128 KKWLLLQKRKSALQSYYKKRYE--------EESRRIYDETRLALNQQLFDSISKSLEAAE 179
W L +RK L+ ++K + + + + D+ RL L DS + L +
Sbjct: 391 GIWCQLNERKRKLKVLFEKMRQFQLDTLCADTDQPVPDDVRLIL-----DSDFERLADVQ 445
Query: 180 TEREVDDVDLKFNLHFP----------------------------PGEVGVDEG------ 205
+ E+ DV + F L++ E G D
Sbjct: 446 SMEELKDVHMYFLLNYSHELPRMQAEQRRKAIQERREAKARRQAAAAENGDDAAEAIVVP 505
Query: 206 -------------QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
Q K+ S+ Y+ KAG+ A FG + EQ L +E+
Sbjct: 506 EPEDDDDPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEIT 565
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
P E+A + F ++ V+ A+++ A +++ EP +RK +R ++ D A ++ P
Sbjct: 566 QESIGPTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRP 625
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL- 371
T +G ID +K++ +KP+ Q++ + AEEEKLL++T L E N
Sbjct: 626 TKNGMVLIDENSPVYSMKYVAKKPVSDLFGDQFIKLMMAEEEKLLEITF-LEEFEGNACA 684
Query: 372 -------FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
+ K Y D +K Q WN R ++ AL +++P ++KE RS + A+
Sbjct: 685 NGTPGDYVEESKALYQLDQFAKHVQEWNKLRAECVQLALQKWVIPDLIKELRSTLHEEAQ 744
Query: 425 SWLLMEYGKALWNKVSVGPYQRKDNDITPD---EEAAP----RVLACCWGPGKPETTFVM 477
++L L+ + V PY+ + + PD EE + RVL + P F
Sbjct: 745 QFVLRSCTGKLYKWLKVAPYKPQ---LPPDFGYEEWSTLRGIRVLGLAYDPDHSVAAFCA 801
Query: 478 LDS-SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSC 534
+ + G++ D L + R S N+ ++ K D +L F+ +PH+VV+GA +
Sbjct: 802 VTTVEGDISDYLRLPNILKRKNSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGAESRDA 861
Query: 535 TSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
+++ DI EI+ H + + + + D L ++Y NS+ +K
Sbjct: 862 QNIQADIKEIL------HELETSEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLLK 915
Query: 595 RAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGL 654
+A +L R +Q+PL + LC EIL + PL+ + ++ + ++ T++VGL
Sbjct: 916 QAASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGL 975
Query: 655 DINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNA 713
DINL + LQ+I GLGPRK +L + L ++ + R VT LG +VF+N
Sbjct: 976 DINLMVQNSRTINLLQYICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINC 1035
Query: 714 VGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM 773
GF+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E
Sbjct: 1036 SGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAG 1089
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
A+E + + P+ LK LD E +R+ +K TLY IR EL ++D+R Y +PS +
Sbjct: 1090 ALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAE 1149
Query: 831 EEFYMISGETEDTLAEGRVVQA-----TVRRVQG-----------------QRAIC---- 864
E F M++ ET D+ G+ V A T RR QG Q C
Sbjct: 1150 ELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLDSANPVRLDSNESWQCPFCHKDD 1209
Query: 865 -------------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDIL 898
LE+GL G + ++ SD R+ E +++ ++
Sbjct: 1210 FPELSEVWNHFDANACPGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPE--ERVRVSQMI 1267
Query: 899 TCKIKSIQKNRYQVFLVCRESEMR--NNRYQ-HCQNLDPYYHEERSSRQSEQEKARKEKE 955
+I I +R+ V R ++++ NN ++ N Y EE+ +R+ KAR
Sbjct: 1268 HVRIIKIDIDRFSVECSSRTADLKDVNNEWRPRRDNYYDYVTEEQDNRKVSDAKARA--- 1324
Query: 956 LAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYA 1015
L +K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D ++
Sbjct: 1325 LKRKIYARRVIAHPSFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVADDIFQ 1384
Query: 1016 HKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR- 1074
H D+ E GK++ +G++L IG + FEDLDE++ R+I P+ + ++ Y+ ++
Sbjct: 1385 HIDVREEGKEND-----FSLGRSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKP 1439
Query: 1075 ---KGSKAEVD---ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLY 1128
G + E D +LLR EKA P +I Y F S PG F+L+Y+ T HEY+ +
Sbjct: 1440 NMVTGDENERDVMEKLLREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVM 1499
Query: 1129 PKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP---MRSPANGGSTASA 1185
P+G++FR ++F+ ++ L +F+ H DP + P+ S + + P MR P S++
Sbjct: 1500 PEGYRFRGQIFDTVNSLPRWFKEHWLDPT--ATPAGASASNLTPLHLMRPPPTISSSSQT 1557
Query: 1186 GSG 1188
G
Sbjct: 1558 SLG 1560
>gi|194762584|ref|XP_001963414.1| GF20387 [Drosophila ananassae]
gi|190629073|gb|EDV44490.1| GF20387 [Drosophila ananassae]
Length = 1870
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 343/1309 (26%), Positives = 603/1309 (46%), Gaps = 197/1309 (15%)
Query: 9 LRKALAGP-PTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P P + DE+ WIY + Q A + ++ + + I + L
Sbjct: 303 LRQVPVTPVPEGSHELDDEADWIYRFAFCKQT-VSEQEKADNREKLRKPPTAVNKIKQTL 361
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 362 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYFD 398
Query: 128 KKWLLLQKRKSALQSYYKKRYE--------EESRRIYDETRLALNQQLFDSISKSLEAAE 179
++W L +RK L++ ++K + + + + D+ RL + DS + L +
Sbjct: 399 ERWCQLNERKRKLKALFEKMRQFQLDTLCADPDKPLPDDIRL-----MQDSDFERLADVQ 453
Query: 180 TEREVDDVDLKFNLHFP-------------------------------PGEVGVD----- 203
+ E+ DV + F L++ G+ G D
Sbjct: 454 SMEELKDVHMYFLLNYSHELPRMQAEQRRKLLQERRDAKARRQAAALENGDHGADGAAVT 513
Query: 204 -------------EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE 250
+ Q K+ S+ Y+ KAG+ A FG + EQ L +E
Sbjct: 514 LPDPDEDDDPELVDDQLKQAPNSSPYAVFRKAGICGFAKHFGLTPEQFAENLRDNYQRNE 573
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
+ +P E+A + F + VL A+++ A +++ EP +RK +R ++ D A ++
Sbjct: 574 VTQESLSPTELAKKYLSPRFMTVDDVLHAAKYVVARQLAQEPLLRKTMREVYFDRARLNI 633
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
PT +G ID +K++ +KP+ Q++ + AEEEKLL++T L E N
Sbjct: 634 RPTKNGMVLIDENSPVYSMKYVAKKPVGDLFGDQFIKLMMAEEEKLLEITF-LEEFEGNA 692
Query: 371 --------LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
+ K Y D SK WN R +K AL +++P ++KE R+ +
Sbjct: 693 NANGPPGDYVEEAKTLYHLDQFSKHVLEWNALRAECVKLALQKWVIPDLIKELRATLHEE 752
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPD---EEAAP----RVLACCWGPGKPETTF 475
A+ ++L L+ + V PY+ D+ D EE + RVL+ + P + F
Sbjct: 753 AQQFVLRSCTAKLYKWLKVAPYK---PDLPSDYGYEEWSTLRGIRVLSLAYDPDQSVAAF 809
Query: 476 VMLDS-SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
+ + G++ D L + R S N ++ K +D +L F+ +PHVVV+GA +
Sbjct: 810 CAVTTVEGDISDYLRLPNILKRKNSHNAEEKSQKLHDLRKLSDFIKMKKPHVVVIGAESR 869
Query: 533 SCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGN 592
+++ DI EI+ ++ + + + + D L ++Y NS+
Sbjct: 870 DAQAIQTDIKEILKEL------ETSEQFPPIEVELIDNELAKIYANSKKGESDFKEYPAL 923
Query: 593 VKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQV 652
+K+AV+L R +Q+PL + LC EIL + PL+ + + + ++ T++V
Sbjct: 924 LKQAVSLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPRELLLEQLSLEFINRTSEV 983
Query: 653 GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFV 711
GLDINL + LQ+ GLGPRK +L + L ++ + R VT LG KVF+
Sbjct: 984 GLDINLMVQNSRTVNLLQYTCGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPKVFI 1043
Query: 712 NAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDAL 771
N GF+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E
Sbjct: 1044 NCSGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNP 1097
Query: 772 EMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPS 828
A+E + + P+ LK LD E +R+ +K TLY IR EL ++D+R Y +PS
Sbjct: 1098 AGALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPS 1157
Query: 829 QDEEFYMISGETEDTLAEGRVVQA-----TVRRVQGQR-----------------AIC-- 864
+E F M++ ET D+ G+ V A T RR QG++ C
Sbjct: 1158 AEELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGEQLDNANPVRIESSDSWQCPFCHK 1217
Query: 865 ---------------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGD 896
LE+GL G + ++ SD R+ E +++
Sbjct: 1218 DDFPELAEVWNHFDANACPGQASGVRVRLENGLPGFIHIKNLSDKQVRNPE--ERVRVSQ 1275
Query: 897 ILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYH---EERSSRQSEQEKARKE 953
++ +I I +R+ V + +++++ + D +Y EE+ +R++ KA
Sbjct: 1276 MIHVRIIKIDIDRFSVDCSSKTADLKDVNNEWRPRRDAFYDFVTEEQDNRKASDAKA--- 1332
Query: 954 KELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGV 1013
K L +K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D +
Sbjct: 1333 KALKRKTYARRVIAHPSFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVADDI 1392
Query: 1014 YAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKF 1073
+ H D+ E GK+++ +G++L IG + FEDLDE++ R+I P+ + ++ Y+ +
Sbjct: 1393 FQHIDVREEGKENE-----YSLGRSLWIGTEEFEDLDEIIARHITPMALAARELIQYKYY 1447
Query: 1074 RKGS-------KAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIG 1126
+ + + ++ +LR EK P +I Y F S PG F+L+Y+ T HEY+
Sbjct: 1448 KPNTCPVNGNERDFMEGILRDEKTRDPKKIHYFFTASRSMPGKFLLSYLPKTKVRHEYVT 1507
Query: 1127 LYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRS 1175
+ P+G++FR ++F+ ++ L+ +F+ H DP A + S + P+ S
Sbjct: 1508 VMPEGYRFRGQIFDTVNSLLRWFKEHWLDPTASPAMNSLSGSNSTPLHS 1556
>gi|297272225|ref|XP_001106850.2| PREDICTED: transcription elongation factor SPT6-like [Macaca mulatta]
Length = 1670
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 349/1269 (27%), Positives = 575/1269 (45%), Gaps = 215/1269 (16%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDA 402
Q+L I AE+E LL I + + + +H S +L+N
Sbjct: 651 DQFLKICLAEDEGLLTTDISIDMKGVEGTLGEPDDHNAC-----SRKLYN---------- 695
Query: 403 LDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE------ 456
WL V PY R D + D++
Sbjct: 696 -----------------------WL------------RVAPY-RPDQQVEEDDDFMDENQ 719
Query: 457 -AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQ--ER 512
RVL + + F +++ GEV D L T R R+++ +K Q E
Sbjct: 720 GKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIET 779
Query: 513 LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESL 572
L KF+++ +PHVV + N L +D+ I+ H D G ++ + + D L
Sbjct: 780 LKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVELVDNEL 833
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFL 632
LY NS+ S + +++AV+L R +Q+PL A +C +IL K PL+ +
Sbjct: 834 AILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHV 893
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+E + ++ N+VG+D+N AI + A +Q++ GLGPRK L + L +
Sbjct: 894 VKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNT 953
Query: 693 -IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
+ +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y A+++
Sbjct: 954 RLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKM 1013
Query: 752 AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYL 808
A + +E D + ++ A+E + + P+ LK LD +E +R+ +K TLY
Sbjct: 1014 AVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYD 1069
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRVQGQ--- 860
IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR QG+
Sbjct: 1070 IRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYD 1129
Query: 861 RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------------L 888
+AI E+GL ++++ S+ W + L
Sbjct: 1130 QAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFL 1189
Query: 889 SDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNLDPYYHE 938
SDK+ + G + C+I I ++ L CR S++ RNN ++ + D YY
Sbjct: 1190 SDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK--DTYYDF 1247
Query: 939 ERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSR 998
+ + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ IIRPSS+
Sbjct: 1248 DAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSK 1306
Query: 999 GPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYID 1058
G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+V RY+
Sbjct: 1307 GENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEIVARYVQ 1361
Query: 1059 PLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI 1115
P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG F+L Y
Sbjct: 1362 PMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQ 1421
Query: 1116 RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRS 1175
P EY+ + P+GF++R ++F ++ L +F+ H DP PS S R+
Sbjct: 1422 PRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT-----RT 1476
Query: 1176 PANGGSTAS 1184
PA+ +T +
Sbjct: 1477 PASINATPA 1485
>gi|195469920|ref|XP_002099884.1| GE16740 [Drosophila yakuba]
gi|194187408|gb|EDX00992.1| GE16740 [Drosophila yakuba]
Length = 1858
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 342/1309 (26%), Positives = 600/1309 (45%), Gaps = 193/1309 (14%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P +G +D E+ WIY + Q + ++ + + I + L
Sbjct: 303 LRQVPVTPVPEGSHELDLEADWIYKYAFCKQT-VSEQEKPENREKLRKPPTAVNKIKQTL 361
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 362 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYYD 398
Query: 128 KKWLLLQKRKSALQSYYKKRYE--------EESRRIYDETRLALNQQLFDSISKSLEAAE 179
++W L +RK L+ ++K + + + I D+ RL L DS + L+ +
Sbjct: 399 ERWCQLNERKRKLKVLFEKMRQFQLDTLCADPDKPIPDDVRLML-----DSDFERLDDVQ 453
Query: 180 TEREVDDVD----LKFNLHFP------------------------PGEVGVDEG------ 205
+ E+ DV L ++ P E G D
Sbjct: 454 SMEELKDVHMYFLLNYSHELPRMQAEQRRKVIQERREAKARRLAAAAENGDDAAEGAAIV 513
Query: 206 ---------------QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE 250
Q K+ S+ Y+ KAG+ A FG + EQ L +E
Sbjct: 514 VPEPEDDDDPELIDDQLKQAPNSSPYAVFRKAGICGFAKHFGLTPEQFAENLRDNYQRNE 573
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
+ P E+A + F ++ V+ A+++ A +++ EP +RK +R ++ D A ++
Sbjct: 574 ITQESLGPTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINI 633
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
PT +G ID +K++ +KP+ Q++ + AEEEKLL++T L E N
Sbjct: 634 RPTKNGMVLIDENSPVYSMKYVAKKPVGDLFGDQFIKLMMAEEEKLLEITF-LEEFEGNA 692
Query: 371 --------LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
+ K Y D SK Q WN R +K AL +++P ++KE RS +
Sbjct: 693 NANGPPGDYVEESKALYQLDQFSKHVQEWNKLRAECVKLALQKWVIPDLIKELRSTLHEE 752
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAP----RVLACCWGPGKPETTFVML 478
A+ ++L L+ + V PY+ + E+ + RVL + P + F +
Sbjct: 753 AQQFVLRSCTGKLYKWLKVAPYKPELPTDYGYEDWSTLRGIRVLGLAYDPDQSVAAFCAV 812
Query: 479 DS-SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCT 535
+ G++ D L + R S N ++ K D +L F+ +PH+VV+GA +
Sbjct: 813 TTVEGDISDYLRLPNILRRKNSHNAEEKAQKLADLRKLSDFIKMKKPHIVVIGAESRDAQ 872
Query: 536 SLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKR 595
+++ DI EI+ ++ + + + + D L ++Y NS+ +K+
Sbjct: 873 NIQADIKEILQEL------ETSEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPALLKQ 926
Query: 596 AVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLD 655
A +L R +Q+PL + LC EIL + PL+ + ++ + ++ T++VGLD
Sbjct: 927 AASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGLD 986
Query: 656 INLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAV 714
INL + LQ+ GLGPRK +L + L ++ + R VT LG KVF+N
Sbjct: 987 INLMVQNSRTVNLLQYTCGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPKVFINCS 1046
Query: 715 GFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMA 774
GF+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E A
Sbjct: 1047 GFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAGA 1100
Query: 775 IEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDE 831
+E + + P+ LK LD E +R+ +K TLY IR EL ++D+R Y +PS +E
Sbjct: 1101 LEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAEE 1160
Query: 832 EFYMISGETEDTLAEGRVVQA-----TVRRVQGQR-----------------AIC----- 864
F M++ ET D+ G+ V A T RR QG++ C
Sbjct: 1161 LFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGEQLDNANPVRIESSDSWQCPFCHKDDF 1220
Query: 865 ------------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILT 899
LE+GL G + ++ SD R+ E +++ ++
Sbjct: 1221 PELSEVWNHFDANACPGQASGVRVRLENGLPGFIHIKNLSDKQVRNPE--ERVRVSQMIH 1278
Query: 900 CKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYH---EERSSRQSEQEKARKEKEL 956
+I I +R+ V + +++++ + D YY EE+ +R++ KA K +
Sbjct: 1279 VRIIKIDIDRFSVDCSSKTADLKDVNNEWRPRRDNYYDFVTEEQDNRKASDAKA---KAM 1335
Query: 957 AKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAH 1016
+K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D ++ H
Sbjct: 1336 KRKTYARRVIAHPSFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVSDDIFQH 1395
Query: 1017 KDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR-- 1074
D+ E GK++ +G++L IG + FEDLDE++ R+I P+ + ++ Y+ ++
Sbjct: 1396 IDVREEGKEND-----YSLGRSLWIGTEEFEDLDEIIARHITPMALAARELIQYKYYKPI 1450
Query: 1075 -----KGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYP 1129
+ + +D++LR EK++ P +I Y F S PG F+L+Y+ T HEY+ + P
Sbjct: 1451 TVTGDENERDVMDKVLREEKSKDPKKIHYFFTASRSMPGKFLLSYLPKTKVRHEYVTVMP 1510
Query: 1130 KGFKFRKRMFEDIDRLVAYFQRHIDDPQGD--SAPSIRSVAAMVPMRSP 1176
+G++FR ++F+ ++ L+ +F+ H DP SA + + + MR P
Sbjct: 1511 EGYRFRGQIFDSVNSLLRWFKEHWLDPTATPASASMVSNSTPLHSMRPP 1559
>gi|194896175|ref|XP_001978427.1| GG19580 [Drosophila erecta]
gi|190650076|gb|EDV47354.1| GG19580 [Drosophila erecta]
Length = 1858
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 335/1283 (26%), Positives = 593/1283 (46%), Gaps = 191/1283 (14%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P +G +D E+ WIY + Q + ++ + + I + L
Sbjct: 290 LRQVPVTPVPEGSHELDLEADWIYKYAFCKQT-VSEQEKPENREKLRKPPTAVNKIKQTL 348
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 349 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYYD 385
Query: 128 KKWLLLQKRKSALQSYYKKRYE--------EESRRIYDETRLALNQQLFDSISKSLEAAE 179
++W L +RK L+ ++K + + + I D+ RL L DS + L +
Sbjct: 386 ERWCQLNERKRKLKVLFEKMRQFQLDTLCADTDKPIPDDVRLML-----DSDFERLADVQ 440
Query: 180 TEREVDDVDLKFNLHF-------------------------------------------- 195
+ E+ DV + F L++
Sbjct: 441 SMEELKDVHMYFLLNYSHELPRMQAEQRRKVIQERREAKARRQAAAAENGDDAAEDAAIV 500
Query: 196 -PPGEVGVD----EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE 250
P E D + Q K+ S+ Y+ KAG+ A FG + EQ L +E
Sbjct: 501 VPRSEDDEDPELIDDQLKQAPNSSPYAVFRKAGICGFAKHFGLTPEQFAENLRDNYQRNE 560
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
+ P E+A + F ++ V+ A+++ A +++ EP +RK +R ++ D A ++
Sbjct: 561 ITQESLGPTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARLNI 620
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
PT +G ID +K++ +KP+ Q++ + AEEEKLL++T L E N
Sbjct: 621 RPTKNGMVLIDENSPVYSMKYVAKKPVGDLFGDQFIKLMMAEEEKLLEITF-LEEFEGNA 679
Query: 371 --------LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
+ K Y D SK Q WN R ++ AL +++P ++KE RS +
Sbjct: 680 NANGPPGDYVEESKALYHLDQFSKHVQEWNKLRAECVQLALHKWVIPDLIKELRSTLHEE 739
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRK-DNDITPDEEAA---PRVLACCWGPGKPETTFVML 478
A+ ++L L+ + V PY+ + D + ++ + RVL + P + F +
Sbjct: 740 AQQFVLRSCTGKLYKWLKVAPYKLELPTDYSYEDWSTLRGIRVLGLAYDPDQSVAAFCAV 799
Query: 479 DS-SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCT 535
+ G++ D L + R S N ++ K D +L F+ +PH+VV+GA +
Sbjct: 800 TTVEGDISDYLRLPNILKRKNSHNAEEKAQKLADLRKLSDFIKMKKPHIVVIGAESRDAQ 859
Query: 536 SLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKR 595
+++ DI EI+ ++ + + + + D L ++Y NS+ +K+
Sbjct: 860 NIQADIKEILQEL------ETSEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPALLKQ 913
Query: 596 AVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLD 655
A +L R +Q+PL + LC EIL + PL+ + ++ + ++ T++VGLD
Sbjct: 914 AASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGLD 973
Query: 656 INLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAV 714
INL + LQ+ GLGPRK +L + L ++ + R VT LG KVF+N
Sbjct: 974 INLMVQNSRTVNLLQYTCGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPKVFINCS 1033
Query: 715 GFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMA 774
GF+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E A
Sbjct: 1034 GFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAGA 1087
Query: 775 IEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDE 831
+E + + P+ LK LD E +R+ +K TLY IR EL ++D+R Y +PS +E
Sbjct: 1088 LEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAEE 1147
Query: 832 EFYMISGETEDTLAEGRVVQA-----TVRRVQGQR-----------------AIC----- 864
F M++ ET D+ G+ V A T RR QG++ C
Sbjct: 1148 LFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGEQLDNANPVRLETSDSWQCPFCHKADF 1207
Query: 865 ------------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILT 899
LE+GL G + ++ SD R+ E +++ ++
Sbjct: 1208 PELSEVWNHFDANACPGQASGVRVRLENGLPGFIHIKNLSDKQVRNPE--ERVRVSQMIH 1265
Query: 900 CKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYH---EERSSRQSEQEKARKEKEL 956
+I I +R+ V + +++++ + D YY EE+ +R++ KA K +
Sbjct: 1266 VRIIKIDIDRFSVDCSSKTADLKDVNNEWRPRRDNYYDFVTEEQDNRKASDAKA---KAM 1322
Query: 957 AKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAH 1016
+K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D ++ H
Sbjct: 1323 KRKTYARRVIAHPSFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVSDDIFQH 1382
Query: 1017 KDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR-- 1074
D+ E GK++ +G++L IG + FEDLDE++ R+I P+ + ++ Y+ ++
Sbjct: 1383 IDVREEGKEND-----YSLGRSLWIGTEEFEDLDEIIARHITPMALAARELIQYKYYKPI 1437
Query: 1075 -----KGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYP 1129
+ + +D++LR EKA+ P +I Y F S PG F+L+Y+ T HEY+ + P
Sbjct: 1438 TVTGDENERDVMDKVLREEKAKDPKKIHYFFTASRSMPGKFLLSYLPKTKVRHEYVTVMP 1497
Query: 1130 KGFKFRKRMFEDIDRLVAYFQRH 1152
+G++FR ++F+ ++ L+ +F+ H
Sbjct: 1498 EGYRFRGQIFDSVNSLLRWFKEH 1520
>gi|444518335|gb|ELV12097.1| Transcription elongation factor SPT6 [Tupaia chinensis]
Length = 1616
Score = 418 bits (1075), Expect = e-113, Method: Compositional matrix adjust.
Identities = 334/1214 (27%), Positives = 559/1214 (46%), Gaps = 199/1214 (16%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I L + Q ++PFIA YRKE L +N+ LW
Sbjct: 325 IKEALGFMRNQHFEVPFIAFYRKEYVEPEL------HIND-----------------LWR 361
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
+ D+KW L+ RK L ++K + Y++ ++ L D I ++L+ + ER
Sbjct: 362 VWQWDEKWTQLRIRKENLTRLFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMER 416
Query: 183 --------EVDDVDLKFNLHF----PPGEVGVDEG------------------------- 205
E+ DV F L++ P +
Sbjct: 417 LKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQ 476
Query: 206 ---QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMA 262
+ K+ R Y+ C AGL +A KFG + EQ G L E E P E+A
Sbjct: 477 RGPELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELA 536
Query: 263 SNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDS 322
++ C+ F + +AVL+GAR+M A++I+ EP VR+ +R F + A ++ PT G +D
Sbjct: 537 KDYVCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDE 596
Query: 323 FHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCK 376
H K+L+ KP+++ D Q+L I AE+E LL + I + + F + K
Sbjct: 597 AHYAYSFKYLKNKPVKELRDDQFLKIGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIK 656
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
+ Y D S Q WN QR + ++ AL FL M KE ++ + AK +++ + L+
Sbjct: 657 QFYYRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLY 716
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLR 496
N + V P +P
Sbjct: 717 NWLRVA-------------------------PYRP------------------------- 726
Query: 497 SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV 556
DQQ +++D FM ++Q + + + S + E + ++V H D
Sbjct: 727 -----DQQVEEDDD-----FMDENQGKGIRVLGIAFSSARDAQMLIEDVKRIV--HELDQ 774
Query: 557 GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP 616
G ++ + + D L LY NS+ S + +++AV+L R +Q+PL A +C
Sbjct: 775 GQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSS 834
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
+IL K PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLG
Sbjct: 835 DEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLG 894
Query: 677 PRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
PRK L + L + + +R VT +G KVF+N GFL++ + S+ +I++L
Sbjct: 895 PRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVL 954
Query: 736 DDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIK 795
D +R+HPE+Y A+++A + +E D + ++ A+E + + P+ LK LD +
Sbjct: 955 DGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAE 1010
Query: 796 EKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQA 852
E +R+ +K TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++
Sbjct: 1011 ELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIIC 1070
Query: 853 TV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE----------LS 889
V RR QG+ +AI E+GL ++++ S+ W + +
Sbjct: 1071 NVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVK 1130
Query: 890 DKLHEG-------DILTCKIKS-------IQKNRYQVFLVCRESEM--RNNRYQHCQNLD 933
+L G L+ K+ I ++ L CR S++ RNN ++ + D
Sbjct: 1131 TRLDNGVTGFIPTKFLSDKVVKRPEERVKIDIEKFSADLTCRTSDLMDRNNEWKLPK--D 1188
Query: 934 PYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESII 993
YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ II
Sbjct: 1189 TYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVII 1247
Query: 994 RPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVV 1053
RPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+V
Sbjct: 1248 RPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEIV 1302
Query: 1054 DRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTF 1110
RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG F
Sbjct: 1303 ARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIRTKKEKPTFIPYFICACKELPGKF 1362
Query: 1111 ILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAM 1170
+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1363 LLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT-- 1420
Query: 1171 VPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1421 ---RTPASINATPA 1431
>gi|195399341|ref|XP_002058279.1| GJ15579 [Drosophila virilis]
gi|194150703|gb|EDW66387.1| GJ15579 [Drosophila virilis]
Length = 1871
Score = 418 bits (1074), Expect = e-113, Method: Compositional matrix adjust.
Identities = 342/1308 (26%), Positives = 597/1308 (45%), Gaps = 200/1308 (15%)
Query: 17 PTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLD 76
P + DE+ WIY + Q A + ++ + + I + L+ + Q+L+
Sbjct: 313 PEGSHELDDEANWIYRFAFCKQT-VSEQEKADNREKMRKPPTAVNKIKQTLEFIRNQQLE 371
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE + E+N D+ LW ++ D++W L +R
Sbjct: 372 VPFIAFYRKEYV--------KPELNIDD---------------LWKVYYYDERWCQLNER 408
Query: 137 KSALQSYYKK--RYEEES------RRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD 188
K L+ ++K +++ E+ + + D+ RL L DS + L ++ E+ DV
Sbjct: 409 KKKLKQLFEKMRQFQLETLCADPDKPLPDDVRLML-----DSDFERLNDVQSMEELKDVH 463
Query: 189 LKFNLHF------------------------------------------------PPGEV 200
+ F L++ P V
Sbjct: 464 MYFLLNYSHELPKMQAELRRKQLQEKREQRARRQAAASAGSDGETNGPDTLVPDKPDNSV 523
Query: 201 GVDEG---------QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDEL 251
+DE Q K+ S+ Y+ KAG+ A FG + EQ L +E+
Sbjct: 524 DLDEAEELELAADEQLKQAPNSSPYAVFRKAGICGFAKHFGLTPEQFAENLRDNYQRNEV 583
Query: 252 EDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC 311
+P EMA + F + VL A+++ A +++ EP +RK +R ++ D A ++
Sbjct: 584 NQESLSPTEMAKQYLSPRFMTVDEVLHAAKYVVARQLAQEPLLRKTMREVYFDRARLNIR 643
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK- 370
PT +G ID +K++ +KP+ Q++ + AEEEKLL++ L E N
Sbjct: 644 PTKNGMVLIDENSPVYSMKYVAKKPVGDLFGDQFIKLLMAEEEKLLEIKF-LDEFEGNAN 702
Query: 371 -------LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
++ + Y D +K+ WN R ++ AL +++P ++KE R+ + A
Sbjct: 703 ANGPPGDYVTEATQLYHLDQFAKNVLEWNALRAECVQLALKKWVIPDLIKELRATLHEEA 762
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAP----RVLACCWGPGKPETTFVMLD 479
+ ++L L+ + V PY+ + EE + R + + P + F +
Sbjct: 763 QQFVLRSCIAKLYKWLKVAPYKPEMPQHHNFEEWSTLRGIRAMGLAYDPDQSVAAFCAIA 822
Query: 480 S-SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTS 536
S G++ D L + R S N ++ K D +L F+ +PHV+V+GA +
Sbjct: 823 SPEGDISDYLRLPSILKRKNSYNAEEKAQKLADLRKLCDFIKLKKPHVIVIGAESRDAQM 882
Query: 537 LKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA 596
++ DI EI+ + + + + + D L ++Y NS+ +K+A
Sbjct: 883 IQTDIREILKDL------EANEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLLKQA 936
Query: 597 VALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDI 656
+L R +Q+PL + LC EIL + PL+ + + + ++ T++VGLDI
Sbjct: 937 ASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPRELLLEQLSLEFINRTSEVGLDI 996
Query: 657 NLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVG 715
NL + LQ+I GLGPRK +L + L ++ + R VT LG KVF+N G
Sbjct: 997 NLMVQNSRTVNLLQYICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPKVFINCSG 1056
Query: 716 FLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAI 775
F+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E A+
Sbjct: 1057 FIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAGAL 1110
Query: 776 EHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEE 832
E + + P+ LK LD E +R+ +K TLY IR EL ++D+R+ Y +PS +E
Sbjct: 1111 EEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRSAYMKPSAEEL 1170
Query: 833 FYMISGETEDTLAEGRVVQA-----TVRRVQGQR-----------------AIC------ 864
F M++ ET D+ G+ V A T RR QG++ C
Sbjct: 1171 FDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGEQLDNANPVRIDDSDSWQCPFCHKDDFP 1230
Query: 865 -----------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILTC 900
LE+GL G + ++ SD R+ E +++ ++
Sbjct: 1231 ELSDVWNHFDDNNCPGQASGVRVRLENGLPGFIHIKNLSDKQVRNPE--ERVRVSQMIHV 1288
Query: 901 KIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYH---EERSSRQSEQEKARKEKELA 957
+I I +R+ V + +++++ + D +Y EE +R+ KA K +
Sbjct: 1289 RIIKIDIDRFSVDCSSKSADLKDVNNEWRPRRDAFYDFVTEELDNRKVTDAKA---KAMK 1345
Query: 958 KKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHK 1017
+K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D ++ H
Sbjct: 1346 RKTYARRVIAHPSFFNKSYAEVIAMLAEADQGEVALRPSSKSKDHLTATWKVADDIFQHI 1405
Query: 1018 DIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGS 1077
D+ E GK+++ +G++L IG + FEDLDE++ R+I+P+ + +L Y+ ++ +
Sbjct: 1406 DVREEGKENE-----YSLGRSLWIGTEEFEDLDEIIARHINPMALAARELLQYKYYKPNT 1460
Query: 1078 K-AEVDE------LLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPK 1130
A V+E LLR EKA P +I Y F S PG F+L+Y+ T HEY+ + P+
Sbjct: 1461 APANVNERDFMEQLLRDEKARDPKKIHYFFTASKSMPGKFLLSYLPKTKVRHEYVTVMPE 1520
Query: 1131 GFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPAN 1178
G++FR ++F+ + L+ +F+ H DP + S S +A +P N
Sbjct: 1521 GYRFRGQIFDTVSSLLRWFKEHWLDPT--AGMSSMSASATPASNTPTN 1566
>gi|195132651|ref|XP_002010756.1| GI21714 [Drosophila mojavensis]
gi|193907544|gb|EDW06411.1| GI21714 [Drosophila mojavensis]
Length = 1898
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 347/1302 (26%), Positives = 593/1302 (45%), Gaps = 188/1302 (14%)
Query: 9 LRKALAGP-PTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P P + DE+ WIY + Q A + ++ + + I + L
Sbjct: 302 LRQVPVTPVPEGSHELDDEADWIYRFAFCKQT-VSEQEKADNREKMRKPPTAVNKIKQTL 360
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 361 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYYD 397
Query: 128 KKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAETEREV 184
++W L RK L+ ++K + + + D+ L + DS + L ++ E+
Sbjct: 398 ERWCQLNDRKRKLKQLFEKMRQFQLETLCDDPDKPLPDDVRLMLDSDFERLNDVQSMEEL 457
Query: 185 DDVDLKFNLHFP------------------------------------PGEVGVD----- 203
DV + F L++ GE GVD
Sbjct: 458 KDVHMYFLLNYSHELPKMQAELRRKQLQERREARARKQASAAAAAAGSDGESGVDLTDKL 517
Query: 204 ---------------EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG 248
E Q K+ S+ Y+ KAG+ A FG + EQ L
Sbjct: 518 DTAELDEAEELELAAEEQLKQAPNSSPYAVFRKAGICGFAKHFGLTPEQFAENLRDNYQR 577
Query: 249 DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV 308
+E+ +P EMA + F + VL A+++ A +++ EP +RK +R ++ D A +
Sbjct: 578 NEVNQESLSPTEMAKQYLSPRFMTVDEVLHAAKYVVARQLAQEPLLRKTMREVYFDRARI 637
Query: 309 STCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL 368
+ PT +G ID +K++ +KP+ Q++ + AEEEKLL++T L E
Sbjct: 638 NIRPTKNGMVLIDENSPVYSMKYVAKKPVGDLFGDQFIKLLMAEEEKLLEITF-LDEFEG 696
Query: 369 NK--------LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMS 420
N ++ + Y D SK+ WN R ++ AL +++P ++KE R+ +
Sbjct: 697 NANANGPPGDYITEATQLYHLDQFSKNVLEWNALRAECVQLALKKWVIPDLIKELRATLH 756
Query: 421 GRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAP----RVLACCWGPGKPETTFV 476
A+ ++L L+ + V PY+ + EE + R + + P + F
Sbjct: 757 EEAQQFVLRSCIAKLYKWLKVAPYKPEMPQHHNFEEWSTLRGIRSMGLAYDPDQSVAAFC 816
Query: 477 MLDS-SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+ S G++ D L + R S N D+ K D +L F+ +PHVVV+GA +
Sbjct: 817 AIASPEGDISDYLRLPSILKRKNSYNAEDKAQKLADLRKLSDFIKMKKPHVVVIGAESRD 876
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
++ DI EI+ + +V + + + D L ++Y NS+ +
Sbjct: 877 AQMIQADIREILKDL------EVNEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLL 930
Query: 594 KRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVG 653
K+A +L R +Q+PL + LC EIL + PL+ + + + ++ T++VG
Sbjct: 931 KQAASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPRELLLEQLSLEFINRTSEVG 990
Query: 654 LDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVN 712
LDINL + LQ+I GLGPRK +L + L ++ + R VT LG KVF+N
Sbjct: 991 LDINLMVQNSRTVNLLQYICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPKVFIN 1050
Query: 713 AVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALE 772
GF+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E
Sbjct: 1051 CSGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPA 1104
Query: 773 MAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQ 829
A+E + + P+ LK LD E +R+ +K TLY IR EL ++D+R+ Y++PS
Sbjct: 1105 GALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRSPYQKPSA 1164
Query: 830 DEEFYMISGETEDTLAEGRVVQA-----TVRRVQG-----------------QRAIC--- 864
+E F M++ ET D+ G+ V A T RR QG Q C
Sbjct: 1165 EELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLDNANPVRIDDSDSWQCPFCHKD 1224
Query: 865 --------------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDI 897
LE+GL G + ++ SD R+ E +++
Sbjct: 1225 DFPELSDVWNHFDDNNCPGQASGVRVRLENGLPGFIHIKNLSDKQVRNPE--ERVRISQT 1282
Query: 898 LTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYH---EERSSRQSEQEKARKEK 954
+ +I I +R+ V + +++++ + D +Y EE +R+ KA K
Sbjct: 1283 IHVRIIKIDIDRFSVDCSSKSADLKDVNNEWRPRRDAFYDYVTEELDNRKVSDAKA---K 1339
Query: 955 ELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVY 1014
+ +K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D ++
Sbjct: 1340 AMKRKTYARRVIAHPSFFNKSYAEVIAMLAEADQGEVALRPSSKSKDHLTATWKVADDIF 1399
Query: 1015 AHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR 1074
H D+ E GK++ +G++L IG + FEDLDE++ R+I+P+ + ++ Y+ ++
Sbjct: 1400 QHIDVREEGKEND-----YSLGRSLWIGTEEFEDLDEIIARHINPMALAARELIQYKYYK 1454
Query: 1075 KGSK-AEVDE------LLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGL 1127
+ A V+E LLR EKA P +I Y F S PG F+L+Y+ T HEY+ +
Sbjct: 1455 PNTAPANVNERDFMEQLLREEKARDPKKIHYFFTASKSMPGKFLLSYLPKTKVRHEYVTV 1514
Query: 1128 YPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
P+G++FR ++F+ + L+ +F+ H DP + SI + A
Sbjct: 1515 MPEGYRFRGQIFDSVSSLLRWFKEHWLDPPTVMSSSISATPA 1556
>gi|195340404|ref|XP_002036803.1| GM12475 [Drosophila sechellia]
gi|194130919|gb|EDW52962.1| GM12475 [Drosophila sechellia]
Length = 1292
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 304/1067 (28%), Positives = 517/1067 (48%), Gaps = 109/1067 (10%)
Query: 206 QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF 265
Q K+ S+ Y+ KAG+ A FG + EQ L +E+ P E+A +
Sbjct: 52 QLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEITQESIGPTELAKQY 111
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQ 325
F +++ V+ A+++ A +++ EP +RK +R ++ D A ++ PT +G ID
Sbjct: 112 LSPRFMTTEEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRPTKNGMVLIDENSP 171
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL--------FSDCKE 377
+K++ +KP+ Q++ + AEEEKLL++T L E N + K
Sbjct: 172 VYSMKYVAKKPVSDLFGDQFIKLMMAEEEKLLEITF-LEEFEGNACANGTPGDYVEESKA 230
Query: 378 HYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWN 437
Y D +K Q WN R ++ AL +++P ++KE RS + A+ ++L L+
Sbjct: 231 LYQLDQFAKHVQEWNKLRAECVQLALQKWVIPDLIKELRSTLHEEAQQFVLRSCTGKLYK 290
Query: 438 KVSVGPYQRK-DNDITPDEEAA---PRVLACCWGPGKPETTFVMLDS-SGEVVDVLFTGC 492
+ V PY+ + D +E + RVL + P F + + G++ D L
Sbjct: 291 WLKVAPYKPQLPTDFGYEEWSTLRGIRVLGLAYDPDHSVAAFCAVTTVEGDISDYLRLPN 350
Query: 493 LTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
+ R S N+ ++ K D +L F+ +PH+VV+GA + +++ DI EI+
Sbjct: 351 ILKRKNSYNLEEKAQKMADLRKLSDFIKMKKPHIVVIGAESRDAQNIQADIKEIL----- 405
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
H + + + + D L ++Y NS+ +K+A +L R +Q+PL
Sbjct: 406 -HELETSEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLLKQAASLARKMQDPLVEY 464
Query: 611 ATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
+ LC EIL + PL+ + ++ + ++ T++VGLDINL + LQ
Sbjct: 465 SQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGLDINLMVQNSRTINLLQ 524
Query: 671 FISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
+I GLGPRK +L + L ++ + R VT LG +VF+N GF+++ S S+
Sbjct: 525 YICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINCSGFIKIDTSSLGDSTE 584
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYL 789
++++LD +R+HPE+Y A+++A + D D+E A+E + + P+ LK
Sbjct: 585 AYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAGALEEILESPERLKDLD 638
Query: 790 LDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
LD E +R+ +K TLY IR EL ++D+R Y +PS +E F M++ ET D+
Sbjct: 639 LDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAEELFDMLTKETPDSFYV 698
Query: 847 GRVVQATV-----RRVQG-----------------QRAIC-------------------- 864
G+ V A V RR QG Q C
Sbjct: 699 GKCVTAMVTGFTYRRPQGDQLDSANPVRIDSNESWQCPFCHKDDFPELSEVWNHFDANAC 758
Query: 865 ---------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
LE+GL G + ++ SD R+ E +++ ++ +I I +R+ V
Sbjct: 759 PGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPE--ERVRVSQMIHVRIIKIDIDRFSVEC 816
Query: 915 VCRESEMRNNRYQHCQNLDPYY---HEERSSRQSEQEKARKEKELAKKHFKERLIVHPCF 971
R +++++ + D YY EE +R+ KAR L +K + R+I HP F
Sbjct: 817 SSRTADLKDVNNEWRPRRDNYYDFVTEELDNRKVSDAKARA---LKRKIYARRVIAHPSF 873
Query: 972 QNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKS 1031
N + E + +L+ + GE +RPSS+ +LT T KV D ++ H D+ E GK++
Sbjct: 874 FNKSYAEVVAMLAGADQGEVALRPSSKSKDHLTATWKVADDIFQHIDVREEGKEND---- 929
Query: 1032 LVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR----KGSKAEVD---EL 1084
+G++L IG + FEDLDE++ R+I P+ + ++ Y+ ++ G + E D +L
Sbjct: 930 -FSLGRSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKPITVNGDENERDVMEKL 988
Query: 1085 LRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDR 1144
LR EKA P +I Y F S PG F+L+Y+ T HEY+ + P+G++FR ++F+ ++
Sbjct: 989 LREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVMPEGYRFRGQIFDTVNS 1048
Query: 1145 LVAYFQRHIDDPQGDSAPSIRSVAAMVP---MRSPANGGSTASAGSG 1188
L+ +F+ H DP + PS SV+ + P MR P S++ G
Sbjct: 1049 LLRWFKEHWLDPT--ATPSSASVSNLTPLHMMRPPPTISSSSQTSLG 1093
>gi|15292371|gb|AAK93454.1| LD47893p [Drosophila melanogaster]
Length = 1422
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 302/1069 (28%), Positives = 517/1069 (48%), Gaps = 113/1069 (10%)
Query: 206 QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF 265
Q K+ S+ Y+ KAG+ A FG + EQ L +E+ P E+A +
Sbjct: 110 QLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEITQESIGPTELAKQY 169
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQ 325
F ++ V+ A+++ A +++ EP +RK +R ++ D A ++ PT +G ID
Sbjct: 170 LSPRFMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRPTKNGMVLIDENSP 229
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI-------KLPEDSLNKLFSDCKEH 378
+K++ +KP+ Q++ + AEEEKLL++T + + K
Sbjct: 230 VYSMKYVAKKPVSDLFGDQFIKLMMAEEEKLLEITFLEEFEGNACANGTPGDYVEESKAL 289
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
Y D +K Q WN R ++ AL +++P ++KE RS + A+ ++L L+
Sbjct: 290 YQLDQFAKHVQEWNKLRAECVQLALQKWVIPDLIKELRSTLHEEAQQFVLRSCTGKLYKW 349
Query: 439 VSVGPYQRKDNDITPD---EEAAP----RVLACCWGPGKPETTFVMLDS-SGEVVDVLFT 490
+ V PY+ + + PD EE + RVL + P F + + G++ D L
Sbjct: 350 LKVAPYKPQ---LPPDFGYEEWSTLRGIRVLGLAYDPDHSVAAFCAVTTVEGDISDYLRL 406
Query: 491 GCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
+ R S N+ ++ K D +L F+ +PH+VV+GA + +++ DI EI+
Sbjct: 407 PNILKRKNSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGAESRDAQNIQADIKEIL--- 463
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
H + + + + D L ++Y NS+ +K+A +L R +Q+PL
Sbjct: 464 ---HELETSEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLLKQAASLARKMQDPLV 520
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ LC EIL + PL+ + ++ + ++ T++VGLDINL +
Sbjct: 521 EYSQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGLDINLMVQNSRTINL 580
Query: 669 LQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
LQ+I GLGPRK +L + L ++ + R VT LG +VF+N GF+++ S S
Sbjct: 581 LQYICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINCSGFIKIDTSSLGDS 640
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
+ ++++LD +R+HPE+Y A+++A + D D+E A+E + + P+ LK
Sbjct: 641 TEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAGALEEILESPERLKD 694
Query: 788 YLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
LD E +R+ +K TLY IR EL ++D+R Y +PS +E F M++ ET D+
Sbjct: 695 LDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAEELFDMLTKETPDSF 754
Query: 845 AEGRVVQATV-----RRVQG-----------------QRAIC------------------ 864
G+ V A V RR QG Q C
Sbjct: 755 YVGKCVTAMVTGFTYRRPQGDQLDSANPVRLDSNESWQCPFCHKDDFPELSEVWNHFDAN 814
Query: 865 -----------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILTCKIKSIQKNRYQV 912
LE+GL G + ++ SD R+ E +++ ++ +I I +R+ V
Sbjct: 815 ACPGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPE--ERVRVSQMIHVRIIKIDIDRFSV 872
Query: 913 FLVCRESEMR--NNRYQ-HCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHP 969
R ++++ NN ++ N Y EE+ +R+ KAR L +K + R+I HP
Sbjct: 873 ECSSRTADLKDVNNEWRPRRDNYYDYVTEEQDNRKVSDAKARA---LKRKIYARRVIAHP 929
Query: 970 CFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDI 1029
F N + E + +L+ + GE +RPSS+ +LT T KV D ++ H D+ E GK++
Sbjct: 930 SFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVADDIFQHIDVREEGKEND-- 987
Query: 1030 KSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR----KGSKAEVD--- 1082
+G++L IG + FEDLDE++ R+I P+ + ++ Y+ ++ G + E D
Sbjct: 988 ---FSLGRSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKPNMVTGDENERDVME 1044
Query: 1083 ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDI 1142
+LLR EKA P +I Y F S PG F+L+Y+ T HEY+ + P+G++FR ++F+ +
Sbjct: 1045 KLLREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVMPEGYRFRGQIFDTV 1104
Query: 1143 DRLVAYFQRHIDDPQGDSAPSIRSVAAMVP---MRSPANGGSTASAGSG 1188
+ L+ +F+ H DP + P+ S + + P MR P S++ G
Sbjct: 1105 NSLLRWFKEHWLDPT--ATPASASASNLTPLHLMRPPPTISSSSQTSLG 1151
>gi|431890964|gb|ELK01843.1| Transcription elongation factor SPT6 [Pteropus alecto]
Length = 1152
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 291/995 (29%), Positives = 488/995 (49%), Gaps = 117/995 (11%)
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 1 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 60
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 61 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 120
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 121 MAIERALQQFLYVQMAKELKNKLLVEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 179
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK- 507
RVL + + F +++ GEV D L T R R+++ ++
Sbjct: 180 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEERERK 239
Query: 508 ---------------------NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
D E L KF+++ +PHVV + N L +D+ I+
Sbjct: 240 ASGWDGLSSLYLSTRYNLDSAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV- 298
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
H D G ++ + + D L LY NS+ S + +++AV+L R +Q+P
Sbjct: 299 -----HELDQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDP 353
Query: 607 LAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
L A +C +IL K PL+ + +E + ++ N+VG+D+N AI +
Sbjct: 354 LIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQ 413
Query: 667 APLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
A +Q++ GLGPRK L + L + + +R VT +G KVF+N GFL++ +
Sbjct: 414 ALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLG 473
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLL 785
S+ +I++LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ L
Sbjct: 474 DSTDSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERL 529
Query: 786 KTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETED 842
K LD +E +R+ +K TLY IR EL ++D R Y+ P+ +E F M++ ET +
Sbjct: 530 KDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPE 589
Query: 843 TLAEGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE-- 887
T G+++ V RR QG+ +AI E+GL ++++ S+ W +
Sbjct: 590 TFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSG 649
Query: 888 -------------------------LSDKLHE--------GDILTCKIKSIQKNRYQVFL 914
LSDK+ + G + C+I I ++ L
Sbjct: 650 SCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADL 709
Query: 915 VCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQ 972
CR S++ RNN ++ + D YY + + +QE+ K K+ + K R+I HP F
Sbjct: 710 TCRTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFH 766
Query: 973 NVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSL 1032
N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 767 NINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA----- 821
Query: 1033 VGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEK 1089
+G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL K
Sbjct: 822 FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDRKKLEELLIKTK 881
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1149
E PT I Y E PG F+L Y P EY+ + P+GF++R ++F ++ L +F
Sbjct: 882 KEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWF 941
Query: 1150 QRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
+ H DP PS S R+PA+ +T +
Sbjct: 942 KDHYQDPVPGITPSSSSRT-----RTPASINATPA 971
>gi|384501263|gb|EIE91754.1| hypothetical protein RO3G_16465 [Rhizopus delemar RA 99-880]
Length = 1386
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 302/1052 (28%), Positives = 520/1052 (49%), Gaps = 78/1052 (7%)
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS-I 171
L K LW I+D D K+ +R+ AL+ + +K Q+FD +
Sbjct: 387 ALLTEKDLWEIYDWDFKYHGFLERRQALKDFLQK------------------TQIFDEYV 428
Query: 172 SKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTK---YSSCSKAGLWEVA 228
+ L+ AE E+ D+ NL+F + + + + PKR T Y S + + E+
Sbjct: 429 NSMLDRAEKVEEITDLTEYVNLNFSE-RINLVQQHARGPKRPTTKSLYQSSKSSAIHELL 487
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEI 288
KFG ++ Q G ED P A + + F VL+ R + A E+
Sbjct: 488 PKFGITARQFGANYVENTRQYFPEDSSVDPIVEAQLYTDSAFPDETRVLKAVRSILAQEL 547
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLI 348
+ +P VRK +R + A V+ PT G + ID H K+L EKPL+ F+D Q+L I
Sbjct: 548 AYDPQVRKGMRKDWESYATVTVKPTDKGFNTIDELHPMKPFKFLTEKPLQAFKDGQFLHI 607
Query: 349 QKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
K E E LL+V I + + + E YLSDG S S Q WN+QR+ +L+ AL +L+
Sbjct: 608 LKGESESLLEVKISIQD--YPSWVARIAEFYLSDGFSDSVQQWNEQRKEVLELALQEYLI 665
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
P M K R + A+ ++ +L+NK++VGP++ +++ + PRV+ G
Sbjct: 666 PLMTKYVREKLRIEAQEYVCQASFTSLYNKINVGPFRGPESNF---KSTVPRVVTVSSGN 722
Query: 469 G--KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
G K V ++ G+V+D + N++D++ + E F+ + +V+
Sbjct: 723 GTHKDPIVAVFVNQRGKVLD-------QIEVPNLKDERYWREFSE----FIKSKKANVLG 771
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQL 586
+ N + + ++ ++ + + + +MD +V D+ RLY+NSR + +
Sbjct: 772 IAGYNAEIRKVIKHMQTMLSEINQANEQSGFSKMD---MVIVDDETARLYKNSRRAQQEF 828
Query: 587 PGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMV 646
P ++ ++L R LQNP V G R++L+ + L++ + D +E+ ++
Sbjct: 829 PEHTETMRYCISLARRLQNP---VMEYTGLNRDLLAIQHHELQHLIPEDTLLFYLERALI 885
Query: 647 DVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLG 706
V N +G+DIN AI + + LQ++SG GPRKA S+ + + +G + +R V
Sbjct: 886 SVVNDLGIDINAAIQSPYLASALQYVSGFGPRKAQSILKKIEASGELESRTALVLRKLTP 945
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND 766
F+N +LR+R A D+LDDTRIHP+ Y LA+++A + D E +++D
Sbjct: 946 ANTFMNCASYLRIRDVDGA-------DILDDTRIHPQDYELARKMAADALEID-EDEMDD 997
Query: 767 DEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKREN---KRETLYLIRRELIHGFQDWRNQ 823
+ + + +++ PD L +LD + +R+ KR+ L I+ EL + D RN+
Sbjct: 998 YDSKVAVVSRVIKEYPDKLNDLILDDYAVVLRRQYNAPKRQILEHIKLELQGPYHDRRNR 1057
Query: 824 YKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDW 883
Y P+ +E+F M++GET L+EG ++ A V +G+ A CVL+SGL G++ + SD+
Sbjct: 1058 YARPTMEEQFVMVTGETRQQLSEGFIIPAMVVACRGKVANCVLDSGLEGIIYVNNVSDE- 1116
Query: 884 RDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNL--DPYY-HEER 940
R +SD L + CK+ I ++++ V L C+ S+ + + L DPYY H E
Sbjct: 1117 RVGSVSDVLQVNQTINCKVLRIDRDKFMVELSCKPSDTKPGSDFGLRRLEEDPYYDHVEE 1176
Query: 941 SSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGP 1000
+ +EK ++ ++ +R+I HP F+ EA L++++ G+ +IRPSS G
Sbjct: 1177 T-----KEKEQQRASRRRQSRSKRVIKHPLFRPFNHIEAEDYLASRQRGDLVIRPSSHGY 1231
Query: 1001 SYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPL 1060
++ +T KV DGVY H D++E ++ K L+IG FEDLDE++ YI+ +
Sbjct: 1232 DHIAITWKVDDGVYQHVDVVELKSNNAPTK--------LRIGNQVFEDLDELIVTYIEAV 1283
Query: 1061 VSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN- 1119
+ ++++ K+ G ++E L P YGF S E G F L + +
Sbjct: 1284 ARKVDEIMAHPKYVPGGLRALNEHLTALTQANPKMSTYGFCQS-EKAGYFDLGFKINIKG 1342
Query: 1120 -PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
P + + P G++ + + +D L+ F+
Sbjct: 1343 PPMRWVVKVLPDGYRLGEVSYPQVDDLINGFK 1374
>gi|195565405|ref|XP_002106292.1| GD16791 [Drosophila simulans]
gi|194203666|gb|EDX17242.1| GD16791 [Drosophila simulans]
Length = 1826
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 351/1320 (26%), Positives = 593/1320 (44%), Gaps = 207/1320 (15%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P +G +D E+ WIY + Q S ++ + + I + L
Sbjct: 295 LREVPVTPVPEGSDELDLEAEWIYKYAFCKHT-VSEQEKPESREKMRKPPTTVNKIKQTL 353
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 354 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYFD 390
Query: 128 KKWLLLQKRKSALQSYYKKRYE--------EESRRIYDETRLALNQQLFDSISKSLEAAE 179
W L RK L+ ++K + + + I D+ RL L DS + L +
Sbjct: 391 GIWCQLNDRKRKLKVLFEKMRQFQLDTLCADTDKPIPDDVRLIL-----DSDFERLADVQ 445
Query: 180 TEREVDDVDLKFNLHFP----------------------------PGEVGVDEG------ 205
+ E+ DV + F L++ E G D
Sbjct: 446 SMEELKDVHMYFLLNYSHELPRMQAEQRRKAIQERREAKARRQAAAAENGDDAAEAIVVP 505
Query: 206 -------------QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
Q K+ S+ Y+ KAG+ A FG + EQ L +E+
Sbjct: 506 EPEDEDDPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEIT 565
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
P E+A + F +++ V+ A+++ A +++ EP +RK +R ++ D A ++ P
Sbjct: 566 QESIGPTELAKQYLSPRFMTTEEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRP 625
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL- 371
T +G ID +K++ +KP+ Q++ + AEEEKLL++T L E N
Sbjct: 626 TKNGMVLIDENSPVYSMKYVAKKPVSDLFGDQFIKLMMAEEEKLLEITF-LEEFEGNACA 684
Query: 372 -------FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
+ K Y D +K Q WN R ++ AL +++P ++KE RS + A+
Sbjct: 685 NGTPGDYVEESKALYQLDQFAKHVQEWNKLRAECVQRALQKWVIPDLIKELRSTLHEEAQ 744
Query: 425 SWLLMEYGKALWNKVSVGPYQRK-DNDITPDEEAA---PRVLACCWGPGKPETTFVMLDS 480
++L L+ + V PY+ + D +E + RVL + P F + +
Sbjct: 745 QFVLRSCTGKLYKWLKVAPYKPQLPADFGYEEWSTLRGIRVLGLAYDPDHSVAAFCAVTT 804
Query: 481 -SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
G++ D L + R S N+ ++ K D +L F+ +PH+VV+GA + ++
Sbjct: 805 VEGDISDYLRLPNILKRKNSYNLEEKAQKMADLRKLSDFIKMKKPHIVVIGAESRDAQNI 864
Query: 538 KDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAV 597
+ DI EI+ ++ + + + + D L ++Y NS+ +K+A
Sbjct: 865 QADIKEILNEL------ETSEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLLKQAA 918
Query: 598 ALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDIN 657
+L R +Q+PL + LC EIL + PL+ + ++ + ++ T++VGLDIN
Sbjct: 919 SLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGLDIN 978
Query: 658 LAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGF 716
L + LQ+I GLGPRK +L + L ++ + R VT LG +VF+N GF
Sbjct: 979 LMVQNSRTINLLQYICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINCSGF 1038
Query: 717 LRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIE 776
+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E A+E
Sbjct: 1039 IKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAGALE 1092
Query: 777 HVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEF 833
+ + P+ LK LD E +R+ +K TLY IR EL ++D+R Y +PS +E F
Sbjct: 1093 EILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAEELF 1152
Query: 834 YMISGETEDTLAEGRVVQATV-----RRVQG-----------------QRAIC------- 864
M++ ET D+ G+ V A V RR QG Q C
Sbjct: 1153 DMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLDSANPVRIDSNESWQCPFCHKDDFPE 1212
Query: 865 ----------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILTCK 901
LE+GL G + ++ SD R+ E +++ ++ +
Sbjct: 1213 LSEVWNHFDANACPGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPE--ERVRVSQMIHVR 1270
Query: 902 IKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYH---EERSSRQSEQEKARKEKELAK 958
I I +R+ V R +++++ + D YY EE +R+ KAR L +
Sbjct: 1271 IIKIDIDRFSVECSSRTADLKDVNNEWRPRRDNYYDFVTEELDNRKVSDAKARA---LKR 1327
Query: 959 KHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKD 1018
K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D ++ H D
Sbjct: 1328 KIYARRVIAHPSFFNKSYAEVVAMLAGADQGEVALRPSSKSKDHLTATWKVADDIFQHID 1387
Query: 1019 IIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR---- 1074
+ E GK++ +G++L IG + FEDLDE++ R+I P+ + ++ Y+ ++
Sbjct: 1388 VREEGKEND-----FSLGRSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKPITV 1442
Query: 1075 KGSKAEVD---ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1131
G + E D +LLR EKA P +I Y F S PG F+L+Y+ T HEYI
Sbjct: 1443 NGDENERDVMEKLLREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYI------ 1496
Query: 1132 FKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP---MRSPANGGSTASAGSG 1188
F+ ++ L+ +F+ H DP + PS SV+ + P MR P S++ G
Sbjct: 1497 -------FDTVNSLLRWFKEHWLDPT--ATPSSASVSNLTPLHMMRPPPTISSSSQTSLG 1547
>gi|348683988|gb|EGZ23803.1| hypothetical protein PHYSODRAFT_349766 [Phytophthora sojae]
Length = 1538
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 360/1289 (27%), Positives = 606/1289 (47%), Gaps = 193/1289 (14%)
Query: 19 DGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIP 78
D E +ES WI + ++ L QR + + + G +S + D ++RF H +KL+
Sbjct: 336 DAEDRAEESEWISDFIIKN-LERRNQRNSAASR-GEIVS-AIDTVLRFY---HDEKLEPA 389
Query: 79 FIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKV------LWAIHDLDKKWLL 132
F+ Y KE W V L+ I DLD KW
Sbjct: 390 FVQRYCKE----------------------------YWKVVGLHTENLYEILDLDVKWDK 421
Query: 133 LQKRKSALQSYYKKRYEEES-------RRIYDETRLALNQQLFDSISK--SLEAAETE-R 182
L +++ + Q+ ++ + + R+ Y++ +++ + +S+ +L+A E+ +
Sbjct: 422 LNRKRRSFQTGIQRVVDSSNAKESAFVRKCYEQLFGTPDEKTYKDLSEFFALDAQESSGQ 481
Query: 183 EVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLG--- 239
+ + D K Y+RP R T Y C+KAGL V+ F ++ LG
Sbjct: 482 DKESADHK----------------YRRPVRRTFYQICTKAGLRPVSLAFTMNASVLGGIV 525
Query: 240 LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR 299
+ E ++ P+E+P +A + F + V++GARH+AA +++ EP VRK +R
Sbjct: 526 AGVDHEDSNRDVPTPEESPGVLAQKYTTKEFPTVDDVMKGARHIAASKVAAEPNVRKCIR 585
Query: 300 SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP-LRKFEDAQ-WLLIQKAEEEKLL 357
++ NAV+ST T G ID FH G++++ + P L FE WL I +AE+E LL
Sbjct: 586 ELYRQNAVLSTEATAKGREEIDEFHYCHGLQYIEKMPVLEVFEAGDLWLKIARAEKEGLL 645
Query: 358 QVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARS 417
++TI + L + YLS G + S + W QR L+L++A+++F++ S E +
Sbjct: 646 KITII--NEKAQDLMDPLEPIYLSQG-NDSDEEWQSQRHLVLQEAINSFMILSFENELKR 702
Query: 418 LMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETT--F 475
++ ++ ++ G AL ++SV PY+ D + P + W ++
Sbjct: 703 DLTVSSRDVVVKMCGNALRERLSVRPYEPADG-VDP-------FIVSIWVENTMDSIAHI 754
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDH-QPHVVVLG-AVNLS 533
V LD +GE+VD C RD + + LLKF+ +H Q HVVV+ + +
Sbjct: 755 VALDVNGELVDKTEGYC-------KRDLNNIQKLSATLLKFLTEHSQTHVVVINVSAGMK 807
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHE--MDELSIVYGDESLPRLYENSRISSDQLPGQKG 591
C + + E+ + + G+ D L IV+ + +P ++ S+ + + P +
Sbjct: 808 CMDMGGVVDEVRRLLGRDDASRFGNRDGHDFLDIVFLKDDVPNMFSRSKRADQEFPEESE 867
Query: 592 NVKRAVALGRYLQNPLAMVATLCGP--------GREILSWKLCPLENFLTPDEKYGMIEQ 643
V+ A+ LGRYL+NP + + + G GRE+L + +++ L D ++
Sbjct: 868 YVRAAIGLGRYLRNPASELCAMWGNVAMNEPSRGRELLFLNVHMMQHSLVKDLLLTEYDR 927
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAH 703
V V V N+ G+DINL + + LQFI GLGP KAAS+ + + R++ ++
Sbjct: 928 VFVQVINKYGVDINLLANHKHTSYQLQFICGLGPVKAASVLDKVRAKNYVERRQELLSKG 987
Query: 704 GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGD 763
+GK V+ N GF+R+R + A ++ LDDTRIHPESY +A ++ + N + D
Sbjct: 988 FVGKIVYRNCAGFIRIRE--RDALREAPLNPLDDTRIHPESYYMAVKICGDA-NNNSTID 1044
Query: 764 LNDD-------EDALEMAIEHVRDRPDLLKTYLLDRHIKE----------------KKRE 800
+ D ED + + +R R T L D I++ +K+
Sbjct: 1045 MYDPNHYSYAVEDTMYQSASAIRSRNAPPNTRLGDAEIQDVLSELDLSAYAGRLELQKKG 1104
Query: 801 NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQ 860
K TL I+REL + + D R +Y+ P ++ F++++GET +TL G +V AT+ + G
Sbjct: 1105 PKLLTLEYIKRELRYPYFDKRAKYQVPKDEDLFFLLNGETRETLRIGMIVPATLLHMSGD 1164
Query: 861 RAICV-LESGLAGMLMKE---DYSDDWRDSELSDKLHEGDILTCKIKSIQKN---RYQVF 913
+ V L+SG+ L +E DY D R +G + KI +IQ + RY++
Sbjct: 1165 EFVRVRLQSGMRSSLHRERLPDYLSDVRPQTFP----KGITVNAKILAIQSDREGRYELQ 1220
Query: 914 LVCRESEM----------RNNRYQHCQNLDPYYHEERSSR-----QSEQEKARKEKELAK 958
L C + R RY + + ++ ER R +E++KA + +
Sbjct: 1221 LGCNRRSLIDMSMCFYPERFPRYTNSKLVES-DSMERVDRLLNEPPAEEDKATTFTQATR 1279
Query: 959 ------KHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDG 1012
K+R I HP F+N+ AM+ L + GE +IRPS+ G +LTLT K+ DG
Sbjct: 1280 VQGSHPSRRKKRQIAHPLFRNINCQTAMQYLREQPVGEVVIRPSTLGTDHLTLTWKMLDG 1339
Query: 1013 VYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRK 1072
VY H DI E KD S IG+TL I E+ +E++DE++ R++DP+ S + ++ Y+
Sbjct: 1340 VYRHFDIQE-----KDKPSEARIGQTLIIKEEKYENIDELIARFVDPMNSLVDDVIRYKY 1394
Query: 1073 FRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF 1132
++ SK V+E L +K E P+RI Y + + PG F +TYI P ++ + GF
Sbjct: 1395 YKNVSKESVEEDLIKQKKEHPSRIPYALHVYSKFPGCFSITYIARETPRSCHMEVKSGGF 1454
Query: 1133 KFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGS 1192
+F R+ I P++ M++ S++S + +
Sbjct: 1455 RFFGRIESSI------------------LPTLSQALQFFKMKALVAPTSSSSRSASY--- 1493
Query: 1193 TNEGGWNRDRSSTPGSRTGRNDYRNGGGR 1221
N DRSS P ++ Y GGR
Sbjct: 1494 -----HNNDRSSGPFAQRSSAPYSGSGGR 1517
>gi|412986636|emb|CCO15062.1| transcription elongation factor SPT6 [Bathycoccus prasinos]
Length = 1597
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 321/1162 (27%), Positives = 558/1162 (48%), Gaps = 96/1162 (8%)
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHD 125
FL ++ Q ++ ++A +++ LL+ + D + VL A++D
Sbjct: 458 FLKMVRTQGYELEYLATNMRDDLHPLLRGKPEEARPPLVGDQVIIQRKTRSFDVLQAVYD 517
Query: 126 LDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVD 185
D ++ LQ RK K E S D+ +A +L K + +++ + V
Sbjct: 518 WDIAYVKLQNRKQKAIETLNKELEAHSN---DQQSVATLMRL----QKLIASSKYDENVQ 570
Query: 186 DVDLKFNLHFPPGEVGVD---EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQL 242
DV+ K L G +D G +RP+R T Y + E+ + E++ + L
Sbjct: 571 DVESKMQLLLKDGAAALDANSTGGSRRPRRRTAYDMHVSRDVLELFKISSPAPEKVAMAL 630
Query: 243 SL-------EKMGDELED------PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEIS 289
E + D +D P +PEE+A ++ + + V++ ++A E++
Sbjct: 631 DTTFAWGEAEGVYDVEDDAMTEILPDASPEELAKHYLDQGYEDEEDVIKALIEVSATELA 690
Query: 290 CEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+P +R++VR + A +T PT G+ ID+FH A VK KPL F D ++ +I
Sbjct: 691 NDPGIRQWVRFHYRQYAQSTTKPTLLGNEQIDTFHPLAAVKRTLNKPLCHFTDIEFSMIA 750
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLP 409
+ + LL+ LPE + +L + Y S+ VS+ A+ WN R +++DA+ L+P
Sbjct: 751 EGVRKGLLEFDAFLPEQEVERLVQNLSNAYCSENVSEKAEQWNTIRRKVVEDAIKKKLVP 810
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALW---NKVSVGP----YQRKDNDITPDEEAAPRVL 462
+ +E + + +K +++ K W NK S P + +D T +
Sbjct: 811 QIARETTAQLVLESKRSMVIAAFKGAWRMLNKKSWTPQLIGVKEEDVHSTLKHLEVRIIS 870
Query: 463 ACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQP 522
A + TT V LD SG++VD L +S +++ +Q ++ +F+ +H+P
Sbjct: 871 AVPASDQETPTTLVSLDGSGQLVDFLELTSFG-KSGRGGSYGTQQEEQRKVAEFISNHRP 929
Query: 523 HVVVLGAVNLSCTSLKDDIYEIIFKMVEE--HPRDVGHEMDELSIVYGDESLPRLYENSR 580
H+V + A + +LK+++ + +E+ + + E+ + + + ++S+ LYE +
Sbjct: 930 HLVAVAASGKNAKTLKEELDRVTGGFLEKDGFVKSIPEEVSAIEVEFINDSVASLYETAS 989
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP---GREILSWKLCPLEN-FLTPDE 636
++ + ++ AVALGR+ ++P A+VA L P E + LCP ++ L+ +E
Sbjct: 990 APVKEMGELQATIRHAVALGRFARDPAAVVANLLQPSGGSHEAATISLCPFQDAALSREE 1049
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL--VRAGAIF 694
+ IE+ + NQ G+D+N A+ +W L+ ++GLGPRK ++ V GA+
Sbjct: 1050 RVSCIERALRCCINQTGVDVNAAMSHQWIARSLEHVAGLGPRKLVPFLTAIRKVDGGALD 1109
Query: 695 TRKDFVTA-HGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
R++ +T H + ++V+ NA + + ++LD +RIHP+ Y A +A
Sbjct: 1110 NREEILTELHAVEERVYENAASAINITDG----------NVLDGSRIHPKHYDKAIAIAS 1159
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVRDRPDL----LKTYLLDRHIKEKKRENKRETLYLI 809
+ I+ E ALE + R+ P L L+ Y E N E L I
Sbjct: 1160 NALDIQIDESGVGRERALERCFDP-REWPKLSVLMLEDYANYLSTPEGGGVNALEILRDI 1218
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV---L 866
R E+ F+D R+++ S DE F ++GET TL G+++ TV+R+ RA CV L
Sbjct: 1219 RMEMRKPFEDVRSEWTRLSSDEIFTAVTGETVHTLQAGKLITCTVKRIDA-RANCVIVQL 1277
Query: 867 ESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY------------QVFL 914
+SG+ G++ ++D SD D L DK+H G ++T ++K+ + Y +V+L
Sbjct: 1278 DSGVTGVIERQDVSDSPFD-RLDDKVHVGQVITARVKAPETTAYGQQVKGIDLENLKVWL 1336
Query: 915 VCR-----ESEMRNNRYQHCQNLDPYYH-----EERSSRQSEQEKARKEKELAK--KHFK 962
CR E E R PYY E++ + K +K+ K K +
Sbjct: 1337 TCRGSHLSEDESRRWEEHVLATTTPYYSLDPLPGEKTIAAARASKPKKKPNQVKHEKSYI 1396
Query: 963 ERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEG 1022
R I HP F+N + EA L+ + G+ +IRPSS+G L+ T+K++D VY H DI EG
Sbjct: 1397 ARTIDHPLFKNCSHVEATAELADGDVGDFVIRPSSKGVKNLSCTIKMFDDVYWHMDIREG 1456
Query: 1023 GKDHKDIKSLVGIGKTLKI--GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAE 1080
K + + +G L I ++ +EDLDE V R+I+P+ L+ + +RKF G E
Sbjct: 1457 KKPGTGGTANLRLGTPLMIDTSKEKYEDLDEAVARHIEPVAGFLRDAVMHRKFLGGRDHE 1516
Query: 1081 VDELL----RIEKAEFPTRIVYGFGISHEHPGTFILTYIRST--NPHHEYIGLYPKGFKF 1134
VDE L R + + P Y +S +H G ++YI S N HHEY+ + P G+ +
Sbjct: 1517 VDEHLQECFRKNRNQRP----YALSVSDKHHGYLCISYIMSASGNVHHEYVEVRPIGYYY 1572
Query: 1135 RKRMFEDIDRLVAYFQRHIDDP 1156
RK F +DR++A+F+ + + P
Sbjct: 1573 RKMEFPTVDRMLAHFKVNCNKP 1594
>gi|195430676|ref|XP_002063380.1| GK21875 [Drosophila willistoni]
gi|194159465|gb|EDW74366.1| GK21875 [Drosophila willistoni]
Length = 1721
Score = 405 bits (1040), Expect = e-109, Method: Compositional matrix adjust.
Identities = 335/1313 (25%), Positives = 589/1313 (44%), Gaps = 181/1313 (13%)
Query: 18 TDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDI 77
D + + DE+ WIY S + ++ + ++ + I + L+ + Q+L++
Sbjct: 261 ADLQELEDEANWIYRHAFSKST--ISEQAWNAERKAPTAVLK---IKQTLEFIRNQQLEV 315
Query: 78 PFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRK 137
PFIA YRKE P L LW I+ D+ W L +RK
Sbjct: 316 PFIAFYRKEYI----------------------KPELSIED-LWKIYYHDELWCQLYERK 352
Query: 138 SALQSYYKK--RYEEES------RRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDL 189
L++ ++K +++ E+ + I D+ RL L DS + L +T E+ DV +
Sbjct: 353 RKLKTLFEKMRQFQLETLGADPEKSIPDDVRLML-----DSDFEHLNEVQTVEELKDVHM 407
Query: 190 KFNLHF--------------------------------------PPGEVGVDEGQYKRPK 211
F L++ E + Q K+
Sbjct: 408 YFLLNYSHELPKMQSQQKRKLLQERREKEKARKQSAKKAAENIESKNETNEADEQLKQSS 467
Query: 212 RSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFN 271
+ Y+ K G++ +FG S EQ L +E++ +P E+A F A
Sbjct: 468 DCSPYAVFRKDGIFGFVKRFGLSPEQFAENLRDNYQRNEIKQESLSPTEVAKGFLSARLK 527
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW 331
+ VLQ ++H+ A +++ EP +RK +R ++ D A ++ PT G + ID +K+
Sbjct: 528 TVDEVLQASKHVVARQLAQEPLLRKTLREVYFDRARLNIRPTKIGMTQIDENSPVYSMKY 587
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS-----DCKEHYLSDGVSK 386
+ +KP+ Q++ + AEEEKL+++ L E N + S K Y D SK
Sbjct: 588 VAKKPVGTLFGDQFIKLLMAEEEKLIEIQF-LDEFEGNSIASGDYVDGAKSLYHLDQFSK 646
Query: 387 SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR 446
WN R ++ AL +++P ++KE ++ + A+ +L L+ + V PY+
Sbjct: 647 HVLEWNALRADSVQMALKQWVIPDLIKELKAKLQEEAQQCILRSCTAKLYKWLKVAPYK- 705
Query: 447 KDNDITPDEEAAP-------RVLACCWGPGKPETTFVMLDS-SGEVVDVLFTGCLTLR-- 496
++ PD + R + + + F + G++ D L + R
Sbjct: 706 --PELPPDSSYSDWSTLHGIRTMGLAYDSDQSVAAFCAFATVEGDISDYLRLPNILKRKK 763
Query: 497 SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV 556
S N ++ K D +L + +PHVVV+GA + ++ DI EI+ ++ +
Sbjct: 764 SNNPEEKAQKLADLRKLSNLIKSKKPHVVVIGAESREAQMIQTDIREILKEL------ET 817
Query: 557 GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP 616
+ + + + L ++Y NS+ +K+AV+L R +Q+PL + LCG
Sbjct: 818 SEQFPHIEVEIVENQLAKVYANSKKGQSDFREYPALLKQAVSLARKIQDPLVEYSQLCGA 877
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
EIL + PL++ + + + ++ TN+VGLD+N+ I LQ+I GLG
Sbjct: 878 DEEILCLRYHPLQDRVPKELLLEQLSLEFINRTNEVGLDVNVMIQNSRSVNLLQYICGLG 937
Query: 677 PRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
PRK +L + L ++ + R VT LG KVF+N GF+++ S S+ ++++L
Sbjct: 938 PRKGQALLKLLKQSNQRLENRTQLVTVCHLGPKVFINCSGFIKIDTSILGDSTEAYVEVL 997
Query: 736 DDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIK 795
D +R+HPE+Y A+++A + D D+E A++ + + P+ L LD
Sbjct: 998 DGSRVHPETYEWARKMANDAMEYD------DEETNPAGALDEILESPERLNDLDLDAFAA 1051
Query: 796 EKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQA 852
E +R NKR TLY I+ EL ++D+R+ Y +PS +E F +++ ET +T G+ V A
Sbjct: 1052 ELERRGLGNKRFTLYDIKSELNCLYKDYRSPYLKPSSEELFDLLTKETPETFYVGKWVGA 1111
Query: 853 TV-----RRVQGQ------------------------------------------RAICV 865
V RR QG +A V
Sbjct: 1112 MVIGFAYRRPQGDQMDNANPIRIEATGRWECPFCHKDFPELSDVWNHFDDNTCRGKAFGV 1171
Query: 866 ---LESGLAGMLMKEDYSDDW-RDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM 921
L++GL G + ++ SD R+ E D +H ++ +I ++ +R+ V + S++
Sbjct: 1172 KLRLDNGLHGFIHIKNLSDKLIRNPE--DLMHISQMIYVRIINVDIDRFSVDCSSKTSDL 1229
Query: 922 RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMK 981
+ + + D +Y + K K L + + R+I HP F N E +
Sbjct: 1230 NDVKNEWRPRRDTFYDHLSEQLDIGKMAETKTKALQQPTYMRRIIAHPSFYNKPYAEVIA 1289
Query: 982 LLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI 1041
+L+ + G+ +RPSS+ +LT T KV + ++ H D+ E K + +GK L I
Sbjct: 1290 MLAKADQGDVALRPSSKASDHLTATWKVANDIFQHIDVREEDKPND-----YSLGKKLWI 1344
Query: 1042 GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK-------GSKAEVDELLRIEKAEFPT 1094
G + F+DLDE++ R+I P+ + +L Y+ ++ + +++LLR EK + P
Sbjct: 1345 GTEEFQDLDEIIARHIHPMAMAAREILQYKYYKSNLASTNGNERDYMEKLLRREKLKEPM 1404
Query: 1095 RIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRH-I 1153
+I Y F S PG F+L+Y+ HEY+ + P+G++ R ++F+ ++ L+ +F+ H +
Sbjct: 1405 KIHYFFSASKPLPGKFLLSYLPRDKVFHEYLTVIPEGYRLRGQIFDSVNSLLCWFKEHWL 1464
Query: 1154 DDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTP 1206
D +APS S + MR P S SA + GS + S TP
Sbjct: 1465 DSSHPPTAPSNLSTTPNM-MRPPPTPMSVGSASARSTGSRPYSVTDSVYSGTP 1516
>gi|325180946|emb|CCA15356.1| hypothetical protein SELMODRAFT_164675 [Albugo laibachii Nc14]
Length = 1612
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 345/1194 (28%), Positives = 559/1194 (46%), Gaps = 146/1194 (12%)
Query: 20 GESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR-DDIMRFLDLLHLQKLDIP 78
E +E+ WI N ++ QRG +S D ++RF H +KL+
Sbjct: 373 AEDRAEEAEWISNYVIKS----LEQRGLRQQAASRGEIVSAIDSVLRFY---HEEKLEPA 425
Query: 79 FIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKS 138
F+ Y KE + + L L+ I DLD KW L ++
Sbjct: 426 FVQRYCKE---------------------YWKVAGLHTEH-LYQILDLDIKWDKLDRKS- 462
Query: 139 ALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPG 198
K +E +R+ D +Q + D K ++ + E+ D F L P
Sbjct: 463 -------KSFEVGIQRVIDSVGSKESQFIRDCYVKLFKSPD-EKTFQDFAEYFALDAPES 514
Query: 199 EVGVDEG----QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE---- 250
D +Y+RP R Y K GL +A F + LG L+ E DE
Sbjct: 515 SGLHDRNGNAPKYRRPGRRNYYQIGLKGGLRPLAEAFTLHASVLGGILA-EGDCDESLRV 573
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
+ P +TP +A + F + VL+GARH+AAV+++ EP VRK +R ++ A V T
Sbjct: 574 IPTPTDTPGSLAEQYTAKEFQTVDDVLKGARHIAAVKVAAEPNVRKCIRQLYRQGARVYT 633
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA--QWLLIQKAEEEKLLQVTIKL--PED 366
T G ID FH G ++L P + +A WL + +AE+E LL + I L PED
Sbjct: 634 ETTAKGKEDIDEFHYCHGFQYLSGMPAHEIMEAGDVWLRLHRAEKEGLLTINIGLDKPED 693
Query: 367 SLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSW 426
L+ L + YLS + S W D R IL++AL+ ++PS E + + ++
Sbjct: 694 LLDPL----EPIYLSQS-NNSEDFWQDHRFQILQEALNGLMIPSFKNELKRDLLIASRED 748
Query: 427 LLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE--TTFVMLDSSGEV 484
++ GK + ++ V PY+ P + P +++ W G + + V LD +GE+
Sbjct: 749 VVRRCGKGMRERLMVRPYE-------PADGTDPYIVS-IWVDGGMDAVASIVALDQNGEL 800
Query: 485 VDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDH-QPHVVVLGAVNLSCTSLKDDIYE 543
+D C R+++ + L KF+ DH + HVVV +NL+ + D+ E
Sbjct: 801 IDKTRGFC-------KREERFVQQLTNTLYKFLQDHSRTHVVV---INLAGGNKGMDMGE 850
Query: 544 IIFKMVEEHPRDVGHEM------DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAV 597
++ + + RD+ D IV+ + +PR+Y S+ + + P + V+ A+
Sbjct: 851 LVDALRRQLGRDIAARYGNYDGSDYFDIVFVKDDVPRMYSRSKRAVIEFPEETEAVRAAI 910
Query: 598 ALGRYLQNPLAMVATLCGP--------GREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
LGRYL+NP + + + G GRE+L + +++ L D ++V V V
Sbjct: 911 GLGRYLRNPQSELCAMWGHLPLDEPTRGRELLYLNMHEMQHSLVKDMLLKEYDRVFVQVV 970
Query: 650 NQVGLDIN-LAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKK 708
N+ G+DIN LA H+ F LQFI+GLGP KAA + + I R+D ++ +GK
Sbjct: 971 NKFGVDINLLANHKHTSFQ-LQFIAGLGPVKAAHVLDKVRARSYIEHRQDLLSKGYVGKV 1029
Query: 709 VFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDD- 767
V+ N VGF+R+R S ++ LDDTRIHPESY +A ++ + N + D+ D
Sbjct: 1030 VYRNCVGFIRIRERDALKESP--LNPLDDTRIHPESYYMAVKMCGDA-NNNATIDMYDPM 1086
Query: 768 ------EDALEMAIEHVRDRPDLLKTYLLDRHIKE----------------KKRENKRET 805
ED + + +R+R T L D I++ +K+ K T
Sbjct: 1087 QYSYAVEDTMFQSATAIRNRNASPYTRLDDNEIQDALSELDLPAYAARLELQKKGPKLLT 1146
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV 865
L I+REL + + D R QY+ PS++E F++++GET TL G +V T+ +
Sbjct: 1147 LEFIKRELRYPYFDKRMQYEPPSKEELFFLLNGETRQTLRPGMIVPCTLINISNGMVRAR 1206
Query: 866 LESGLAGMLMKEDYSDDWRDSEL-SDKLHEGDILTCKIKSIQKN---RYQVFLVCRESEM 921
L++G+ L E D D + ++ G I+ CKI Q+N +++ + C E +
Sbjct: 1207 LQNGILASLRSELLPDYMTDDFIRANGFPRGVIVNCKILRFQQNPHEQWEAQVGCNEDSL 1266
Query: 922 RNNRYQHCQN-LDPYYHEERSSRQS--------------EQEKARKEKE--LAKKHFKER 964
+ + Q+ L PY ER S ++ AR E++ L K R
Sbjct: 1267 HDVKRSFNQHLLVPYADRERLEVDSVARISKLVNLMTVEDENGARVERQSALGPPKRKRR 1326
Query: 965 LIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGK 1024
I H FQN++ AM L +K PGE++IRPS+ G +LTL+ K+ +GVY H DI E
Sbjct: 1327 QIAHSAFQNISCKAAMTFLRSKAPGEAVIRPSTIGTDHLTLSWKMLEGVYRHFDIEE--- 1383
Query: 1025 DHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDEL 1084
+D S IG TL I E+ +E++DE++ R+++P+ ++ ++ ++ F+ S +
Sbjct: 1384 --RDKPSEARIGATLVIKEEEYENIDELLARFVEPMNELVEEVVRHKYFKTSSIETIHGD 1441
Query: 1085 LRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRM 1138
L +K E P RI Y + PG F +T++ PH ++ + P G +F R+
Sbjct: 1442 LIKQKKENPGRIPYILHVYDRFPGCFSITFVARFTPHSCHMEVKPTGLRFFGRV 1495
>gi|241617734|ref|XP_002408206.1| S1 RNA binding domain-containing protein, putative [Ixodes
scapularis]
gi|215502937|gb|EEC12431.1| S1 RNA binding domain-containing protein, putative [Ixodes
scapularis]
Length = 1420
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 274/943 (29%), Positives = 473/943 (50%), Gaps = 69/943 (7%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
F +++ L+GAR+M AV+IS +P VR+ +R F + A + P+ G ID H +
Sbjct: 372 FPTAEEALKGARYMVAVQISMDPLVRRCIRETFFERAKICVTPSKKGLKEIDENHPCYPI 431
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN---KLFSDCKEHYLSDGVSK 386
K+L+ KP+R E Q+L + +AE E LL+ +I + DS + + K+ Y D S
Sbjct: 432 KYLKNKPVRDLEGEQFLHMSQAEGEGLLKTSIVMDSDSRSHPGSYLDEIKQLYYRDEFSN 491
Query: 387 SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ- 445
+ Q WN+QR L AL L P+ KE + + A+ ++ + L+N + V PYQ
Sbjct: 492 NVQEWNNQRCEALSYALSKLLYPAFEKELKVQLLLEAQDGIVKACCRKLYNWLKVAPYQV 551
Query: 446 --RKDNDITPDEEAAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ + D D RV A + F ++D +GEV++ L L R + ++
Sbjct: 552 DPQMEEDEDFDTRDGIRVFAIAYENDWEVPAFGALIDGTGEVMEHLRLPHLLKRKNSWKE 611
Query: 503 QQS--KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
++ K++D L KF+++ +PHV+ +GA + + +DI ++ + E +M
Sbjct: 612 KERELKEHDMRVLRKFILNKKPHVICVGAQSREALQIVEDIKAVVTDLAE------NEQM 665
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
+++ D L +Y NS+ + +++A++L R +Q+PL + LC P EI
Sbjct: 666 PLINVELLDNDLAIVYMNSKKAESDFRDYPLLLRQAISLARRMQDPLVEFSQLCTPDEEI 725
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
K PL++ + + + V+ TN+VG+DINLAI +QF+ GLGPRK
Sbjct: 726 FCLKYHPLQDSVPRTDFTNGLNLEFVNRTNEVGVDINLAIAHTHTSYLVQFLCGLGPRKG 785
Query: 681 ASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
+L ++L ++ + +R VT +G KVF+N GF+++ + S++ ++++LD +R
Sbjct: 786 YALLKTLKQSHQRLESRTQLVTVCHMGPKVFINCAGFIKIDTTSFENSTNAYVEVLDGSR 845
Query: 740 IHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR 799
+HPE+Y A+++A + D D+ +D + E A+E + + P+ L+ L R
Sbjct: 846 VHPEAYEWARKMAVDALEYD---DVTEDVNPAE-ALEEILENPEKLRPMFL--------R 893
Query: 800 ENKRETLYL--IRRELIHGFQ-------------DWRNQYKEPSQDEEFYMISGETEDTL 844
K T + I R HG Q W+ + + E + +
Sbjct: 894 AGKMVTCQVVGIARRKPHGQQLDQANPIRNDETGLWQCPFCLKNDFPELSEVWNHFDAGS 953
Query: 845 AEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
G+ + VR L++G+ G + SD + + +++ G IL C+I
Sbjct: 954 CPGQSMGVRVR----------LDNGVNGFIHIRFISDK-KVTNPEERVRPGMILHCRIIK 1002
Query: 905 IQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKER 964
I R+ V L CR S++ + + L + S+ + + + L + +R
Sbjct: 1003 IDIERFAVDLTCRSSDLADVNNEWSVTLS-----QSSTNEEPNINSALTQSLRFGAYVKR 1057
Query: 965 LIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGK 1024
+IVHP F N++ EA KLLS + G+ IIRPSS+G +LT+T KV++G+ H D+ E GK
Sbjct: 1058 VIVHPSFHNISYKEAEKLLSTMDQGDVIIRPSSKGVDHLTVTWKVHEGILQHIDVKEQGK 1117
Query: 1025 DHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR--KGSKAEV- 1081
++ +G +L I + FEDLDE++ R++ P+ + + + S+R FR +G K EV
Sbjct: 1118 ENA-----FSLGSSLLINNEEFEDLDEIIARHVQPMAGYARDLTSFRYFREAEGGKREVL 1172
Query: 1082 DELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFED 1141
++LL EK P++I Y E PG F+L+Y+ HEYI + P G+++R++MF
Sbjct: 1173 EKLLAEEKKRNPSKIHYVVSSCREFPGKFLLSYLPRVKARHEYITVTPDGYRYRQQMFHS 1232
Query: 1142 IDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
+ L +F+ H DP + S + A PM + G+T S
Sbjct: 1233 VGSLFRWFKEHFRDPVPGTPGS--ATNARTPMGQSSYIGATPS 1273
>gi|393216857|gb|EJD02347.1| transcription elongation factor SPT6 [Fomitiporia mediterranea
MF3/22]
Length = 1449
Score = 391 bits (1005), Expect = e-105, Method: Compositional matrix adjust.
Identities = 309/1099 (28%), Positives = 540/1099 (49%), Gaps = 99/1099 (9%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLL--KDLEQNEVNNDNNDDFERTPTLKWHKVL 120
+ R L+ L +Q L++P+I +R++ +S +D V N DD L
Sbjct: 365 VTRALEFLLVQFLEVPYIYAHRRD-FISYFNPQDTHAPRVELLNQDD------------L 411
Query: 121 WAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAET 180
W I+ L +K+ L +RK ALQ Y+ ++ Y E +L N + ++ + T
Sbjct: 412 WRIYALGQKFRSLCQRKKALQRIYENI---DAHDEYYEGQLVPNMDSVEVVADVTQWLGT 468
Query: 181 EREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGL 240
+ + + F E + ++K P R + Y K+ + +A +G S ++ +
Sbjct: 469 KYKDNKKKSTLVSPFRDEEEQAETRKHKLPSRMSAYEVAKKSIISRIAEGYGIKSHEIVV 528
Query: 241 Q-LSLEKMGDELEDPKETPEEMASNFK---CAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
+S +ED +P A + + ++ +L+ AR + A E+ +P +R+
Sbjct: 529 NFMSAGHNVHFVEDKDLSPAAFAEQYADPDPSKALPAEDLLRQARMIIATELGIDPLLRR 588
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRK-FEDAQWLLIQKAEEEK 355
+VR F ++A +S PT G + ID H + K+L KP+ + + Q+L I +AE +
Sbjct: 589 HVRDTFKNHAQISILPTDRGKTKIDDHHVYYVFKYLYNKPIEEMLQSTQFLNILEAESQH 648
Query: 356 LLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
L+ VTI LP D +L + E + SD S+ A++WN++R L+++DA++ L+P K
Sbjct: 649 LVTVTISLPSDVRQRLVNQLVEAFTSDSFSEMAKVWNEERALVVEDAVEKHLIPMGAKWV 708
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKP---E 472
R + + +L AL +V++ PY D+ E+A+ VLA WG G P E
Sbjct: 709 REFIREEVEDYLAKSCADALHERVNMAPYHPP--DLHEGEQAS--VLAVSWGKGDPKRDE 764
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
V LD +G LR + D +++ + +P VVV+G +++
Sbjct: 765 INLVFLDEAGR-----------LREHSQIDNLLDSKNRDEFRDLVKRRRPDVVVIGGLSI 813
Query: 533 SCTSLKDDIYEIIFKMVEEHPRDV-------GHEMDELS--------IVYGDESLPRLYE 577
+ +L + KM +P D+ MD++S ++Y + + RLY+
Sbjct: 814 NTATLSHHV-----KMA-LNPHDIEILRPNESSFMDDVSNDQALNIPVIYVQDEVARLYQ 867
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREIL----SWKLCPLENFLT 633
+S+ ++++ P + V L RY Q+PL A L G I L P E L+
Sbjct: 868 HSKRATEEFPHLPLVARYCVGLARYAQSPLNEFAALGGDLTAITFDDAVQPLIPTEKLLS 927
Query: 634 PDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA- 692
E+V+VDV N+VG+DIN A++ + L +++GLGPRKA +L + +V G
Sbjct: 928 ------AFERVLVDVVNKVGVDINRAVNDPYYATLLPYVAGLGPRKAQALIKKIVSLGGN 981
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRV----------RRSGQAASSSQFIDLLDDTRIHP 742
+ R+ FV + L ++F+NA GFLR+ R G A S + D LDDTR+HP
Sbjct: 982 LVNREQFVKSGILTMRIFLNAAGFLRIAQDPEYKEPKSRGGANADYSNYPDPLDDTRVHP 1041
Query: 743 ESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDR-----HIKEK 797
E Y LA+++A + D E D++D+ + + + ++D ++ K L+ ++E
Sbjct: 1042 EDYDLARKMATDALELD-EEDVHDEHPS-NVVGQIMKDSDNVRKLDELNLDDFAISMEET 1099
Query: 798 KRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
E KR TL +IR ELI F + R ++ P E M++GETE TL G +V V R+
Sbjct: 1100 SGELKRHTLNVIRAELIRPFGELRPKFVLPEASEVLTMLTGETERTLRVGLIVSVLVIRL 1159
Query: 858 QGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
A+ L+SG+ G++ SDD S + G I+ K + K+++ + L R
Sbjct: 1160 TEGFAVVKLDSGIEGIINGMYQSDDGTVSVKKGQTLPGVIIDVK-SDLVKDQFSIELSSR 1218
Query: 918 ESEMRNNRYQHCQ-NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTA 976
S++ Q + D Y++ ++ R + ++ +K E+ + R+I HP FQN +
Sbjct: 1219 PSDVAVGDAQFRRWKPDEYWNVTQAERDYDVQQRKKRAEVDRTR---RVIKHPNFQNFNS 1275
Query: 977 DEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIG 1036
+A L + PG+ +IRPSS+G ++L +T KV D +Y H D++E D +G G
Sbjct: 1276 AQAETFLDKQHPGDVVIRPSSKGLNHLAVTWKVADNLYQHIDVVEPNADPS--GQTLG-G 1332
Query: 1037 KTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRI 1096
+ + G+ F DLDE++ ++ + ++ ++++ KF+K E+ + L A P +
Sbjct: 1333 QLIVDGKYEFADLDELIVNHVKAMSRRVEELMAHEKFKKDDD-ELQKFLISFVAANPNKS 1391
Query: 1097 VYGFGISHEHPGTFILTYI 1115
+YGF ++ + PG F L+++
Sbjct: 1392 IYGFTLNRKKPGHFNLSFL 1410
>gi|328769676|gb|EGF79719.1| hypothetical protein BATDEDRAFT_89114 [Batrachochytrium dendrobatidis
JAM81]
Length = 1683
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 363/1391 (26%), Positives = 626/1391 (45%), Gaps = 164/1391 (11%)
Query: 19 DGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIP 78
D + E+T+I L+ ++ + +P L +S + + + ++P
Sbjct: 331 DDAELASEATFITRLLVKE------RQNSQTPVTNEALLLSA--VTHLVRFIRRDLFEVP 382
Query: 79 FIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKS 138
FI MYRK+ +L DL LW I DL+ ++L ++ +K
Sbjct: 383 FIYMYRKDYFDGIL-DLPD----------------------LWRIVDLNTQFLGIESKKR 419
Query: 139 ALQSYYKKRYEEESR---RIYDETRL-ALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
A+ S + + R IY T + LN FD + + ++ + L + +
Sbjct: 420 AVLSLINDILKIDDRINSDIYIRTFVDRLNS--FDDVQDA---------INYLQLTYCIE 468
Query: 195 FPPGEVGVDEGQ-YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELED 253
+ + + + +KR Y K + + + F + +Q ++ ++ ED
Sbjct: 469 LDAHQNTLQKRRLFKRVAWRRDYEDAKKNNIGGLVNLFNVNIQQYSASMTTQQSLHLPED 528
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
E+P AS F F ++ L AR + +I+ P +R ++R ++ +AV+ PT
Sbjct: 529 HHESPLVAASQFVSPRFPDPESALAAARLVIGQDIAAYPQLRAFIRRVYFVDAVIDVLPT 588
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
G I H + K+L+EKP F D Q+L I AE E L+ V+++ + +L +
Sbjct: 589 ERGKREIVPHHPYYHFKYLKEKPKFSFTDGQFLQIMTAESEGLVVVSVR--VEEEPRLLA 646
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
D ++ +D V+ A+ WN QR +I + A + P K + + A W ++ +
Sbjct: 647 DIMKYICNDYVNDLAEEWNTQRRMIAEYAAKQVIFPLCSKWLKEQLLVSAIEWTALKCQE 706
Query: 434 ALWNKVSVGPYQ--RKDNDITPDEEAAPRVLACCWGPG-KPETTF-VMLDSSGEVVDVLF 489
L VS+ PY+ + +D+ ++ AP VL+ WG G + TF ++ +G++ + L
Sbjct: 707 KLERWVSMSPYRPAQSSDDVHSYDDVAPVVLSITWGEGDRSSPTFAAIIGENGQLSEYLK 766
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
L R + ND L+ +P VVV+G LK + + +++
Sbjct: 767 LDKLNDR--------ERGNDLNMLIDLAARFRPAVVVVGG-------LKPNTQTQLLRLL 811
Query: 550 EEHPRDV---GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGN--VKRAVALGRYLQ 604
EE G + + ++ ++ + R+Y +S+ + + P + ++ V+LGR +Q
Sbjct: 812 EETITAAEVQGKLKENIPVMIVEDEVARIYMHSKRAELEFPIKDYPQLIRYCVSLGRRVQ 871
Query: 605 NPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+P A L + S ++ PL+N L ++ ++E+ +++ + G+DIN A
Sbjct: 872 DPTQEFAGLFNVNEDYKSLRIHPLQNLLPDLKRKTVLERALMNAVSLCGVDINAAASNSN 931
Query: 665 QFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVR-RS 722
LQF+SGLGPRK+ ++ ++R+G + +R D + + KVF+N FLR+R +
Sbjct: 932 LAHTLQFVSGLGPRKSQAIISKIIRSGGKLESRADLIRKNLCAAKVFINCASFLRIRSKH 991
Query: 723 GQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP 782
+ + S ID+LDDTR+HPE Y LA+++A + + D DD + +A
Sbjct: 992 FRQSFSDSVIDVLDDTRVHPEDYDLARKMAADALDLDDTALDEDDTPSQHVAELMESGDA 1051
Query: 783 DLLKTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGE 839
D L LLD + E +R + K L IR+ELIH +Q+ R Q++ S DE F M++GE
Sbjct: 1052 DRLNQLLLDDYAIELERRIHQPKLICLNEIRKELIHPYQERRQQFQPASYDEIFSMLTGE 1111
Query: 840 TEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILT 899
++DTL EG + + ++ + C L SGL GM+ ++ L++ +
Sbjct: 1112 SDDTLYEGLITSGHIVIIKDRFLFCRLSSGLEGMVHAKNLDIPHGHQSLTELFQINMSIP 1171
Query: 900 CKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNL--DPYYHEERSSRQSEQEKARKEKELA 957
+ + K R V L R + +N N+ D Y++ + KA K LA
Sbjct: 1172 VCVVGVNKERMTVELSGR---VESNATMDEGNIKRDQYFNAAQEHDDIAASKAI--KYLA 1226
Query: 958 KKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHK 1017
K + R+I HP F+N+ A + LS + GE ++RPS+RG ++++T KV DG+Y H
Sbjct: 1227 KPKKQVRVIQHPFFKNMDYRAAEEYLSTRPRGEVVVRPSTRGNDHISITWKVDDGLYQHV 1286
Query: 1018 DIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGS 1077
D++E K+++ +GK L+I + F ++D+++ YI+P+ + ++++ KF++ S
Sbjct: 1287 DVLELEKENE-----WALGKVLRIDKQAFTEIDQIIAEYIEPMTRRIAQVMNHDKFKRKS 1341
Query: 1078 KAEVDELLRI--EKAEFPTRIVYGFGISHEHPGTFILTYIRSTN-PHHEYIGLYPKGFKF 1134
+D++ E+ R YGF + PG F L + N PHH+Y+ + P G F
Sbjct: 1342 ---LDDMFVYVSEQMAVLKRSAYGFIVVPHKPGMFYLVFRHPQNRPHHDYVIVQPDGLLF 1398
Query: 1135 RKRMFEDIDRLVAYF-----QRHIDDPQGDSAPSIRSVAAMVPM---------------- 1173
RK F+ ID L+AYF +R APS +A V M
Sbjct: 1399 RKVKFQSIDDLLAYFKKTEAERSTSVKSRGVAPSTHHLATGVGMHMNPQRQQQYQQQQQQ 1458
Query: 1174 ------------RSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGGR 1221
R P GGS +S + N + RS TG++ G
Sbjct: 1459 QQQPYQKQHVSSRQPPVGGSRSSK-----PNPNMTSLSNIRSVPIQHGTGQHVDSRGPSW 1513
Query: 1222 DGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYD-----------TPKWDSANKS 1270
+G G RG+ S+N RQ+SS+ P WD +
Sbjct: 1514 GDQYTGNSGTLNGGYRGQSSSN------GREPRQESSWGEPDGMARGPPLKPHWD---QR 1564
Query: 1271 GDDSWGNFPGAKA---QNPAGREAFPGG--WGSS-GGGGSSGWGGASDGDNGGWGHSSGG 1324
DD G G K+ Q + R+ F G +G+S WGG D N G +SG
Sbjct: 1565 QDDFHGAQRGGKSDQFQKGSSRD-FRGSQPYGNSRSAPQEPSWGGVHDVHNERLGGTSGT 1623
Query: 1325 A---DKDSGWG 1332
+ KD WG
Sbjct: 1624 SKLNSKDLSWG 1634
>gi|195048462|ref|XP_001992531.1| GH24153 [Drosophila grimshawi]
gi|193893372|gb|EDV92238.1| GH24153 [Drosophila grimshawi]
Length = 1895
Score = 388 bits (997), Expect = e-104, Method: Compositional matrix adjust.
Identities = 290/1058 (27%), Positives = 507/1058 (47%), Gaps = 107/1058 (10%)
Query: 206 QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF 265
Q K+ S+ Y+ KAG+ A G + EQ L +E+ +P E+A +
Sbjct: 540 QLKQASNSSPYAIFRKAGICGFAKHVGLTPEQFAENLRDNYQRNEVNQESLSPTELAKQY 599
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQ 325
F + VL A+++ A +++ EP +RK +R ++ D A ++ PT +G ID
Sbjct: 600 LSPRFMTVDEVLYAAKYVVARQLAQEPLLRKTMREVYFDRARLNIRPTKNGMVLIDENSP 659
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK--------LFSDCKE 377
+K++ +KP+ Q++ + AEEEKLL++ L E N ++ +
Sbjct: 660 VYSMKYVAKKPVGDLFGDQFIKLLMAEEEKLLEIQF-LDEFEGNANANGPPGDYITEAAQ 718
Query: 378 HYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWN 437
Y D +K+ WN R ++ AL +++P ++KE R+ + A+ ++L L+
Sbjct: 719 LYHLDQFAKNVLDWNALRAECVQMALKKWVIPDLIKELRATLHEEAQQFVLRSCIAKLYK 778
Query: 438 KVSVGPYQRKDNDITPDEEAAP----RVLACCWGPGKPETTFVMLDS-SGEVVDVLFTGC 492
+ V PY+ + EE + R L + P + F + S G++ D L
Sbjct: 779 WLKVAPYKPEMPHHHNAEEWSTLRGIRSLGLAYDPDQSVAAFCAIASVEGDISDYLRLPS 838
Query: 493 LTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
+ R S N ++ K D +L +F+ +PH+VV+GA + ++ DI EI+ +
Sbjct: 839 ILKRKSSHNPEEKAQKLADLRKLREFIKLKKPHIVVIGAESRDAQMIQADIREILKDL-- 896
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
+ + + + D L ++Y NS+ +K+A +L R +Q+PL
Sbjct: 897 ----ETKEQFPPIEVEIVDNELAKIYANSKKGEIDFKEYPPLLKQAASLARKMQDPLVEY 952
Query: 611 ATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
+ LC EIL + PL+ + D + ++ T++VGLDINL + LQ
Sbjct: 953 SQLCDADDEILCLRYHPLQERVPRDLLLEQLSLEFINRTSEVGLDINLMVQNSRTVNLLQ 1012
Query: 671 FISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
+I GLGPRK +L + L ++ + R VT LG KVF+N GF+++ S S+
Sbjct: 1013 YICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPKVFINCSGFIKIDTSSLGDSTE 1072
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYL 789
++++LD +R+HPE+Y A+++A + D D+E A+E + + P+ LK
Sbjct: 1073 AYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAGALEEILESPERLKDLD 1126
Query: 790 LDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
LD E +R+ +K TLY IR EL ++D+R +++PS +E F M++ ET D+
Sbjct: 1127 LDAFAVELERQGFGSKSTTLYDIRNELSCLYKDFRTPFQKPSTEELFDMLTKETPDSFYV 1186
Query: 847 GRVVQA-----TVRRVQG-----------------QRAIC-------------------- 864
G+ V A T RR QG Q C
Sbjct: 1187 GKCVTAMVTGFTYRRPQGDQLDTANPVRIEDTDSWQCPFCHKDDFPELSDVWNHFDDNNC 1246
Query: 865 ---------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
LE+GL G + ++ SD R+ E +++ + +I I +R+ V
Sbjct: 1247 PGQASGVRVRLENGLPGFIHIKNLSDKQVRNPE--ERVRVTQTIHVRIIKIDIDRFSVDC 1304
Query: 915 VCRESEMRNNRYQHCQNLDPYYH---EERSSRQSEQEKARKEKELAKKHFKERLIVHPCF 971
+ +++++ + D +Y EE +R+ KA K L +K + R+I HP F
Sbjct: 1305 SSKSADLKDVNNEWRPRRDAFYDFVTEELDNRKVTDAKA---KALKRKTYARRVIAHPSF 1361
Query: 972 QNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKS 1031
N + E + +L+ + GE +RPSS+ +LT T KV D ++ H D+ E GK+++
Sbjct: 1362 FNKSYAEVIAMLAEADQGEVALRPSSKSKDHLTATWKVADDIFQHIDVREEGKENE---- 1417
Query: 1032 LVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAE-------VDEL 1084
+G++L IG + FEDLDE++ R+I+P+ + + ++ Y+ ++ + A +++L
Sbjct: 1418 -YSLGRSLWIGTEEFEDLDEIIARHINPMALNARELIQYKYYKPNTAAANVNERDFMEQL 1476
Query: 1085 LRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDR 1144
LR EK P +I Y F S PG F+L Y+ T HEY+ + P+G++FR ++F+ +
Sbjct: 1477 LREEKTRDPKKIHYFFTASKSMPGKFLLAYLPKTKVRHEYVTVMPEGYRFRGQIFDTVSS 1536
Query: 1145 LVAYFQRH-IDDPQGDSAPSIRSVAAMVPMRSPANGGS 1181
L+ +F+ H +D P ++ S + A +P N S
Sbjct: 1537 LLRWFKEHWLDAPT--ASMSAGTAGATPSSNTPINSHS 1572
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 9 LRKALAGPPTDGES-IVDESTWIYNQLLSGTLPLFG-QRGAGSPKEGHDLSISRDDIMRF 66
LR+ P +G + + DE+ WIY + P Q A S ++ + + I +
Sbjct: 303 LRQVPVTPVPEGSNELNDEANWIYR--FAFCKPTVSEQEKADSREKMRKPPTAVNKIKQT 360
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+ + Q+L++PFIA YRKE + E+N D+ LW ++
Sbjct: 361 LEFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYY 397
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALN---QQLFDSISKSLEAAETERE 183
D++W L +RK L+ ++K + + + D+ L + + DS + L ++ E
Sbjct: 398 DERWCQLNERKRKLKLLFEKMRQFQLETLCDDPEKPLPDDVRLMLDSDFERLADVQSMEE 457
Query: 184 VDDVDLKFNLHF 195
+ DV + F L++
Sbjct: 458 LKDVHMYFLLNY 469
>gi|357603735|gb|EHJ63902.1| hypothetical protein KGM_10426 [Danaus plexippus]
Length = 1738
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 286/960 (29%), Positives = 489/960 (50%), Gaps = 101/960 (10%)
Query: 212 RSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFN 271
RS Y C KAG+ + KFG S EQ + E+E P E A+ + +
Sbjct: 672 RSGPYELCRKAGIEPLVKKFGLSPEQFAENVRDNYQRHEVEQQPVPPLEAAAEY-VSPGG 730
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW 331
S V++ A +M V+++ EP +R +R + A V+T PTP G ID H +K+
Sbjct: 731 SCSEVVRRAVYMCGVQLAREPLLRATLRDALRERATVTTKPTPRGLKEIDEGHPCYSMKY 790
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSDGVSKSAQ 389
L++KP+R Q+L + A ++KLL++TI ++ ++ + K+ Y D + + Q
Sbjct: 791 LKKKPVRDLTGDQFLRLTIAADDKLLELTISEQIEGNTSPSYLEELKQLYQKDEFAATVQ 850
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK-- 447
WN+ R + AL ++P + +E +++ AK ++L + L++ + V PY+ +
Sbjct: 851 AWNELRAQAVTLALTKIVIPELRRELHAVLLQEAKDYVLKCCRRRLYDWLKVAPYESRVS 910
Query: 448 -DNDITPDEEAAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQ--NVRDQ 503
++D D RV++ + P + + F ++ ++GEVVD L L LR + ++
Sbjct: 911 DEDDEEWDSSNGLRVMSIAYVPERTQCAFATVVAAAGEVVDHLRLPHLLLRRNAWDAAER 970
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV--EEHPRDVGHEMD 561
++K+ D L +F+ +PHV+V+G + S+K D+ E + ++V E+ PR
Sbjct: 971 RNKEADMTSLRRFIQRKKPHVIVIGGESREALSVKADVAECVAQLVDDEQFPR------- 1023
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREIL 621
+ + D ++ ++Y NS + +++A+ R LQ+PL ++ LCGP EIL
Sbjct: 1024 -IPVEIADNTISKIYSNSIRGRNDFREYPETLRQAICQARLLQDPLMEISQLCGPDEEIL 1082
Query: 622 SWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAA 681
+ PL++ L ++ IE V+ N+VG+D+N A+ LQF+ GLGPRKA
Sbjct: 1083 CLRYHPLQDQLPKEDLLEGIELEFVNRINEVGVDVNEAVLTGRGTELLQFVCGLGPRKAQ 1142
Query: 682 SLQRSLVRAG-AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
+L + + + R VT +G KVF+N GF+R+ S S+ +I++LD +R+
Sbjct: 1143 ALIKLFKQTNQKLENRTQLVTVCHMGPKVFINCSGFIRIDTSSLGDSTEAYIEVLDGSRV 1202
Query: 741 HPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDRHIKEKKR 799
HPE+Y A+++A ++ +DEDA A+E + + P+ LK LD +E +R
Sbjct: 1203 HPETYEWARKMA-------VDALEYEDEDANPAGALEEILEAPERLKDLDLDAFAEELER 1255
Query: 800 E---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-- 854
+ NK TLY IR EL ++D R Y+ P+ +E F M++ ET +TL G++V ATV
Sbjct: 1256 QGFGNKSITLYDIRAELNSRYKDLRVAYRSPTPEELFDMLTKETPETLYVGKMVLATVIG 1315
Query: 855 ---RRVQGQ-----RAICVLESGL--AGMLMKEDY---SDDWR----------------- 884
R+ Q + + E+GL K D+ S+ W
Sbjct: 1316 ISHRKPQREMLDQANPVRNDETGLWECPFCHKNDFPELSEVWNHFDAGACPGQATGVRVR 1375
Query: 885 -DSELSDKLH-----------------EGDILTCKIKSIQKNRYQVFLVCRESEM--RNN 924
D+ LS +H G + C+I I R+ V + S++ +NN
Sbjct: 1376 LDNGLSGYIHIKNLSDRHVTDPTERVRIGQTIHCRILKIDVERFSVDCSSKSSDLLDKNN 1435
Query: 925 RYQHCQNLDPYYHEERSSRQSEQEKARKEKELA----KKHFKERLIVHPCFQNVTADEAM 980
++ + DPYY +E SE + RK+ E + + +R+IVHP F N++ EA
Sbjct: 1436 EWRPPK--DPYYDQE-----SEDKDVRKDTETKQTKERMQYVKRVIVHPAFHNISFAEAE 1488
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
KL+ GE I+RPSS+G +LT+T KV DG+ H D+ E GK++ +G++L
Sbjct: 1489 KLMENMAQGEVIVRPSSKGSDHLTVTWKVADGICQHIDVREEGKENA-----FSLGRSLW 1543
Query: 1041 IGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK--GSKAEVDELLRIEKAEFPTRIVY 1098
I FEDLDE++ RY+ P+ H + +++Y+ ++ G + + +E+L+ EK++ P +I Y
Sbjct: 1544 IQGSEFEDLDEIIARYVTPMAGHARDLIAYKYYKNLGGMRDKAEEILKDEKSKNPNKIHY 1603
Score = 40.4 bits (93), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 9 LRKALAGPPTDGES-IVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
+R+ P +G + + DE+ WIY Q P+ + + + I + L
Sbjct: 299 IREVPITPVEEGSTELEDEAEWIYKQAFLKA-PVSKADSQEARERTRRTGGTVIKIRQAL 357
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
D + Q L++PFIA YRKE L +N+ LW ++ D
Sbjct: 358 DFMRNQTLEVPFIAFYRKEYVQPELS------IND-----------------LWKVYKYD 394
Query: 128 KKWLLLQKRKSAL 140
KW L++RK L
Sbjct: 395 AKWCQLKQRKENL 407
>gi|389748924|gb|EIM90101.1| transcription elongation factor Spt6 [Stereum hirsutum FP-91666 SS1]
Length = 1593
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 348/1328 (26%), Positives = 585/1328 (44%), Gaps = 154/1328 (11%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L LL +Q+ ++P+I ++++ + +VN N ER LW ++ L
Sbjct: 357 LRLLFIQEFEVPYIWTHKRDYLTWFHASDIRTQVNLLN---LER---------LWRVYYL 404
Query: 127 DKKWLLLQKRKSALQSYYKK------RYEEESRRIYDETRLALNQQLFDSISKSLEAAET 180
+K+ L +R+ AL++ Y + +E E RR D + + + + E
Sbjct: 405 GQKYRALLERRRALEALYTRLGVSDEHFENEIRRKIDSVEVIADTTEWLGLKYKDEKKHK 464
Query: 181 EREVDDVDLKFNLHFPPGEVGVD-EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLG 239
+ F +HF E + + + K P RS+ Y K+ + +A FG E++
Sbjct: 465 K--------SFEMHFHDDEEEAEPDKKRKLPSRSSGYEVAKKSVISNLAEGFGIKPEEIV 516
Query: 240 LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAV---LQGARHMAAVEISCEPCVRK 296
+ + +E+ PE A F + V L+ AR + A E+ +P +R+
Sbjct: 517 MNFVSSETAHFVENQDLAPEAYADQFVDPDPTKALPVAELLRRARMIIATELGKDPLLRQ 576
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF-EDAQWLLIQKAEEEK 355
+R +F D+A +S PT G + ID H + K+L +KP+ E +Q+L + AE E
Sbjct: 577 EMRQVFKDHARISVLPTERGVNKIDEHHPYFAFKYLYQKPVVDLRESSQFLYMLAAESEH 636
Query: 356 LLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
L+ +TI LP+++ +E + SD + +A+ WN +R ++ + ++ LLP K
Sbjct: 637 LVTITIFLPDEAKANFSRRLEEAFASDSYTDTARAWNAERLRVINETVEQHLLPVGAKWT 696
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE--- 472
R + + + G L ++ V Y+ + E P VLA WG G P+
Sbjct: 697 REWLRDEVEDLMASRCGDTLRERIDVASYRPPEA-----PEGIPWVLAMSWGKGDPQKDA 751
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
T V D G + + L+ N++D K LL+ + + VV+G ++
Sbjct: 752 ITCVGFDDGGRLRE-------HLKIDNLQDADPKAE----LLELLRKRPWNAVVIGGFSM 800
Query: 533 SCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGN 592
+ T L + E + E + RD +E ++++Y + R++++S ++++ P
Sbjct: 801 TTTKLFSLVKEFLHSPPETN-RD-PNEFQHIALMYAQDETARIFQHSNRAAEEFPSWPPI 858
Query: 593 VKRAVALGRYLQNPLAMVATLCGPGREILSW-----KLCPLENFLTPDEKYGMIEQVMVD 647
K L RY+Q+PL A L GP +S+ +L P E L +E+V+VD
Sbjct: 859 AKYCAGLARYVQSPLNEYAAL-GPDITSISYEEDHQQLIPREKLLF------ALERVLVD 911
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVR-AGAIFTRKDFVTAHGLG 706
VTN VG+D+N A++ + L F+ GLGPRKA L + + G + +R F+ A L
Sbjct: 912 VTNAVGVDVNRAVNDAYYQHLLPFVCGLGPRKAQVLVKKIASLGGTLISRDQFIRAELLT 971
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQ------FIDLLDDTRIHPESYGLAQELAK---EVYN 757
K+F+NA GFLR+ + S D LDDTRIHPE Y LA+++A E+
Sbjct: 972 TKIFLNAAGFLRIVQEHMEKPSKSRHDDDTVQDPLDDTRIHPEDYDLARKMATDALELDE 1031
Query: 758 RDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGF 817
DI G+ +L M + D L + E E KR TL LIR ELI+ F
Sbjct: 1032 EDIHGEHPSHVVSLIMQDADNVRKLDELNLDDFAVSLMESGGERKRLTLQLIREELINPF 1091
Query: 818 QDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV-LESGLAGMLMK 876
+ R P+ E M+SGET+ TL G +V V R + V L+SG+ G++
Sbjct: 1092 AEKRKPMPSPTPWEVLTMLSGETQRTLRVGLIVAVMVVRFPKGNIVAVRLDSGIEGVIGS 1151
Query: 877 EDYSDDWRDSELSDKLHEGD----ILTCKIKSIQKNRYQVFLVCRESEMR--NNRYQHCQ 930
+D+ + + D + G ++ I + N++ V L R +++ +++++ +
Sbjct: 1152 HYLTDNGTE-KAEDVVKRGQTIPGVIIHVITDLPNNKFLVELSSRPTDVAAGDSQFRRVK 1210
Query: 931 NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGE 990
+ D + H + R E + +K E+ K R+I HP F N + +A L ++ G+
Sbjct: 1211 HDDAWNHSQ-WERDKEIQARKKRAEVDKTR---RVIKHPNFHNFNSSQAETYLDKQQRGD 1266
Query: 991 SIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDL 1049
+IRPSS+G +L +T KV D +Y H D++E D + IG L I G+ F DL
Sbjct: 1267 VVIRPSSKGADHLAITWKVDDKLYQHIDVVEPDAD----PTGQSIGTRLIIDGKYEFSDL 1322
Query: 1050 DEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
DE++ ++ + ++ ++++ KF+ G + E+ L+ A P++ YGF ++ + PG
Sbjct: 1323 DELIVNHVQAMARRVEELMAFEKFKAGPEDELHLFLKNFVAANPSKSAYGFALNRKRPGH 1382
Query: 1110 FILTYIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ-RHIDDPQGDSAPSIRS 1166
F L ++ + N + + + P+ + + L F+ RHI +
Sbjct: 1383 FSLCFLANKNATIQTWPVRVAPEAYYLFDTPATGVPELCNAFKVRHIHE----------- 1431
Query: 1167 VAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSS-------TPGSRTGRNDYRNG- 1218
+ +AGSG GG T GG R+ TPG + R R
Sbjct: 1432 ---------------SKNAGSGAGGKTAYGGRTPARTPAAALSGMTPGRMSVRQPARTPN 1476
Query: 1219 --GGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYDTPKWDSANKSGDDSWG 1276
PS P PYG S + N SS P + +G
Sbjct: 1477 PYAAPPPVPSRTPNPYGS-----APPPSAASRTPNPYPPQSSLPVPPGMPPSYPPGAGFG 1531
Query: 1277 NFPGAKAQNPAGREAFPGGWGSSGGGGSSGWGGASDGDNG-------------GWGHSSG 1323
P +A P G P WG + +G A +G WG +G
Sbjct: 1532 -MPPPQAP-PYGFPGAPPAWGVQPPAVPNAFGQAPPDPHGMNPARAAMIQGAPTWGAPNG 1589
Query: 1324 GADKDSGW 1331
A GW
Sbjct: 1590 SA----GW 1593
>gi|13277574|gb|AAH03696.1| SUPT6H protein, partial [Homo sapiens]
Length = 1076
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 272/914 (29%), Positives = 453/914 (49%), Gaps = 97/914 (10%)
Query: 344 QWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQREL 397
Q+L I AE+E LL I + + F + K+ Y D S Q WN QR +
Sbjct: 2 QFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTM 61
Query: 398 ILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE- 456
++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 62 AIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDDF 120
Query: 457 ------AAPRVLACCWGPGKPETTFV-MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKND 509
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 121 MDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKA 180
Query: 510 Q--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 181 QDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVEL 234
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K P
Sbjct: 235 VDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHP 294
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
L+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L + L
Sbjct: 295 LQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKIL 354
Query: 688 VRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
+ + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 355 KQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYE 414
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKR 803
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 415 WARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKH 470
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRVQ 858
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR Q
Sbjct: 471 ITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQ 530
Query: 859 GQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE----------------------- 887
G+ +AI E+GL ++++ S+ W +
Sbjct: 531 GESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFI 590
Query: 888 ----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNLD 933
LSDK+ + G + C+I I ++ L CR S++ RNN ++ + D
Sbjct: 591 PTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK--D 648
Query: 934 PYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESII 993
YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ II
Sbjct: 649 TYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVII 707
Query: 994 RPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVV 1053
RPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+V
Sbjct: 708 RPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEIV 762
Query: 1054 DRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTF 1110
RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG F
Sbjct: 763 ARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKF 822
Query: 1111 ILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAM 1170
+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 823 LLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT-- 880
Query: 1171 VPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 881 ---RTPASINATPA 891
>gi|164661355|ref|XP_001731800.1| hypothetical protein MGL_1068 [Malassezia globosa CBS 7966]
gi|159105701|gb|EDP44586.1| hypothetical protein MGL_1068 [Malassezia globosa CBS 7966]
Length = 1544
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 323/1146 (28%), Positives = 535/1146 (46%), Gaps = 74/1146 (6%)
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
T TL + L +H L K+ LL RK +L+S + + + D + + +
Sbjct: 376 TTTLLVRQELLTLHTLGIKYKLLLSRKDSLRSTFSELEATFTDAPVDGS--IDIHAVRST 433
Query: 171 ISKSLEAAETEREVDDVD----LKFNLHFPPGEV---GVDEGQYKRPKRSTKYSSCSKAG 223
+ L A T EV D+ ++F F V G + KRP ++Y
Sbjct: 434 VEDLLVQASTLEEVTDISEWLAMRFGERFREATVLAKGHETQTLKRPTVVSEYDQRKHTP 493
Query: 224 LWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHM 283
+ ++A++ G +S QL ++ +D + P +A F A ++ A A
Sbjct: 494 MAQLAARLGLTSTQLAANVAGGIKQFVPDDDESAPLTVADEFIGAAPGATTAEAALALAR 553
Query: 284 AAV--EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF- 340
+ EI EP +R+ VR++F +A++ PT G + ID H + K+LR KP+
Sbjct: 554 TLLAHEIGKEPALRREVRTLFRTSALLDVEPTERGMTRIDEAHPYYNFKFLRAKPVHAIL 613
Query: 341 -EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELIL 399
+Q L I AEEE+L+ VT++LP D+ NKL ++ ++SDGVS +Q WND+R ++
Sbjct: 614 QNASQLLQIVHAEEERLVHVTLRLPTDTANKLEQRLQDQFVSDGVSARSQAWNDERRAVI 673
Query: 400 KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ-----RKDNDITPD 454
++ +FLLP R + + LL + + L +V GP Q + D D
Sbjct: 674 EEVCASFLLPLGRAWTREWLLEECREALLRQCEQKLTQRVEGGPVQSAGMLSRQGDPEWD 733
Query: 455 EEAA--PRVLACCWGPGKPETTFVM---LDSSGEVVD-VLFTGCLTLRSQNVR---DQQS 505
E+ + PRVLA G G P T+ V+ LD G +++ V + LR V D
Sbjct: 734 EQVSHVPRVLAVSHGSGDPRTSKVVAICLDEDGHLIERVTYDTLRPLRGAAVEAGDDSDV 793
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHE------ 559
+++ + K + P V+V+ + LK + +++ EE R+ G E
Sbjct: 794 QEDPRAEFTKLVRRRHPDVIVVNGFSAHAQELKAIVQDLVSSAYEERVREEGLEGIAAEH 853
Query: 560 --MDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPG 617
MD +S VY D + RLY++S ++++ P + V L RY Q+P+ A L G
Sbjct: 854 ARMDVVS-VYDD--VARLYQHSARAAEEFPELSVLARYCVGLARYAQSPVNEFAAL---G 907
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
++ + + P + L + +E+ +V + N +GLD+ +A+ + L FI+GLGP
Sbjct: 908 ADLTAVQFDPAQRLLPTERLRVCLERAIVMLVNDIGLDLQIALTNTYVQHMLPFIAGLGP 967
Query: 678 RKAASLQRSL-VRAGAIFTRKDFVTAHG-LGKKVFVNAVGFLRV--RRSGQAASSSQFID 733
RKA +L ++ R I ++ + G L V+ NA+ FLR+ + A D
Sbjct: 968 RKAQALLNAIRTRLDGIVVNREVLVRRGLLSFVVWNNAISFLRIDQDAAADALDDDAQPD 1027
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DLLKTYLLDR 792
+LD TRIHPE Y +++A++ N+ E DL + +L A RP + L LD
Sbjct: 1028 VLDTTRIHPEDYDFPRQMARDALNKH-EEDLEGEHPSLACAEIMEDARPSEKLAALDLDN 1086
Query: 793 HIK---EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
+ E++ KR TL ++ELI + DWR P+ +E F M +GET +L+EG V
Sbjct: 1087 YATMLWERRGLRKRLTLLTCKQELIRPYDDWRPPQLLPTTEELFMMFTGETRRSLSEGYV 1146
Query: 850 VQATVRRVQGQRAI-----CVLESGLAGMLMKEDYSDDW--RDSELSDKLHEGDILTCKI 902
V V R++ R I LE+G+ G++ D + RD L G L I
Sbjct: 1147 VPVIVTRIEEGRDIEGVLRVRLEAGIDGVITGRDIMPGYNSRDVRLRRLFRSGQALNAVI 1206
Query: 903 KSIQKNRYQVFLVCR-ESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHF 961
+ R + L R E+ N Q +DP Y + ++ + + + +
Sbjct: 1207 VQLDLQRMRAELSLRAEAFEYVNPAQGHTPVDPMYFDHERAQMANDAADERARRRHQTRI 1266
Query: 962 KERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIE 1021
R+I HP F N+ A +A L+ + G +IRPSSRG +L +T KV DGVY H D++E
Sbjct: 1267 GRRVIDHPNFHNLNAVQAQNFLATQPRGSVVIRPSSRGMDHLAVTWKVDDGVYQHIDVLE 1326
Query: 1022 GGKDHKDIKSLVGIGKTLKIGE-DTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAE 1080
K++ +G+ L++ + ++ DLD+++ ++ P+ + ++ M+++ KF+ +
Sbjct: 1327 LDKEND-----YALGRILRVADMGSYADLDDLIVNHVRPMAAMVEMMMNHEKFKGADERA 1381
Query: 1081 VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY-IRSTNPHHEY-IGLYPKGFKF-RKR 1137
+ L P R VY FG++ +HPG F L + S P + + + P FK +
Sbjct: 1382 LHTFLTNASLANPNRSVYAFGLNKQHPGYFDLAFKANSQAPIQSWPVKVLPGAFKLGQAT 1441
Query: 1138 MFEDIDRLVAYFQR----HIDDPQGD--SAPSIRSVAAMVPMRSPAN-GGSTASAGSGWG 1190
D+ L F+ + +GD SAP A R+P GG A +G G
Sbjct: 1442 QLADVAALTNAFKTQYMAQTNPMRGDRTSAPHGGMTPAYYGGRTPGRVGGGMTPAYAGGG 1501
Query: 1191 GSTNEG 1196
+ N G
Sbjct: 1502 ATPNYG 1507
>gi|409045871|gb|EKM55351.1| hypothetical protein PHACADRAFT_255920 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1542
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 312/1173 (26%), Positives = 558/1173 (47%), Gaps = 121/1173 (10%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L L +Q+ ++P+I +++ + ++ N D + L + LW ++ +
Sbjct: 368 LQYLFVQEFEVPYIWTHKR------------DYISYFNPQDLKTRVELLSLEDLWRVYAV 415
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS-ISKSLEAAE------ 179
+K+ L +R+ AL + Y RL ++ + F++ I K +E E
Sbjct: 416 GQKYRSLVERRKALDALYG--------------RLGVSDEYFENEIRKKVETVEMVADST 461
Query: 180 ---TEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
+ + D+ +F F E + + K P R++ Y K+ + ++A FG S
Sbjct: 462 EWLSMKYRDNKKQQFEFQFHDDEEQPEAQKRKMPSRTSAYDIAKKSVVAKLAQGFGIQSH 521
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNF---KCAMFNSSQAVLQGARHMAAVEISCEPC 293
++ L K +E+ P A F A + +L+ AR + A E+ +P
Sbjct: 522 EVVLNFVENKNTHPVEEQDLEPAAYADQFVDPDPAKALVPEELLRRARMILATELGKDPL 581
Query: 294 VRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREK-PLRKFEDAQWLLIQKAE 352
+R+ +R F A+VS PT G S ID H + K+L+ K + + AQ L I +AE
Sbjct: 582 LRQEMRDRFRREALVSVRPTERGISKIDDQHPYYNFKYLKNKRAIDMLQSAQLLHILEAE 641
Query: 353 EEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
+ L+ V I LP + + + D + + + WN +R ++++ LD LLP+ V
Sbjct: 642 AQHLVTVAITLPAEVKGDFERRLADAFSVDAYTDAGRAWNAERLRVVQETLDQHLLPAAV 701
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE 472
K R + + L + +L ++ V P++ KD++I P E P V+A WG G P+
Sbjct: 702 KWTREWIREEEEESLCRQCAYSLRGRIDVAPWRNKDSNIRPGE--IPSVMALSWGKGDPQ 759
Query: 473 ---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA 529
T V+LD G LR D ++ L + + +P ++ +G
Sbjct: 760 KDSITMVLLDEGGR-----------LREHTRLDNLVDTENRLELREIVKRRRPDIIAIGG 808
Query: 530 VNLSCTSLKDDIYEIIFKMVEEHPRDVGHE--------MDELSI--VYGDESLPRLYENS 579
++ T L + E+I +P + G E ++ L I +Y + + R+Y++S
Sbjct: 809 FTIATTKLAHRVKELI------NPPEQGSEYYGGPDPNLEPLGIDVIYVFDEVARIYQHS 862
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSW-----KLCPLENFLTP 634
+ + ++ K + L RY+Q+PL A L G I+++ +L P E LT
Sbjct: 863 KRADEEFSSLTPLAKYCIGLARYVQSPLNEYAAL-GSDITIITFDEEYQQLVPKEKLLT- 920
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+E+V+VDVTN++G+DIN AI + L F+ GLGPRKA +L + + G
Sbjct: 921 -----ALERVLVDVTNKIGVDINRAITDSYYQHLLPFVCGLGPRKAQALVKRIAAIGGTL 975
Query: 695 TRKD-FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ--------FIDLLDDTRIHPESY 745
+D F+ L K+F+NA GFLR+ + + D LD+TRIHPE Y
Sbjct: 976 VNRDQFIRNGLLTTKIFLNAAGFLRIAQDHDLPKPPKNRHNEDIDVADPLDNTRIHPEDY 1035
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL---LKTYLLDR---HIKEKKR 799
LA+++A + D E D++D+ + + + + PD L LD ++ E +
Sbjct: 1036 ELARKMATDALELD-EEDVHDEHPS--HVVTLIMNDPDSSKKLGELNLDDFAVNMYETNQ 1092
Query: 800 ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQG 859
+ KR TL LIR+ELI F++ R +KE + + M++GET DTL + ++ V RV+
Sbjct: 1093 DKKRWTLVLIRQELIEPFKESRKDWKEAEEWDIVAMLAGETRDTLRKNLMLSVQVTRVRE 1152
Query: 860 QRAICVLESGLAGML--MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
L+SGL G + + +D++ RD + + + +L +I ++ + V L R
Sbjct: 1153 STIGVRLDSGLEGTITRLSDDHTVRPRDIAKTGQTLQAYVLGHDF-NIVRDIFTVELSTR 1211
Query: 918 ESEMR--NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVT 975
++M + +Y+ + D + + + R +E + +K E+ K R+I HP F N+
Sbjct: 1212 ATDMVVGDTQYKRTKPDDCWDYVQHD-RDNELLQRKKRAEIDKTR---RVIKHPNFHNLN 1267
Query: 976 ADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGI 1035
A +A + L ++ G+ +IRPSS+GP++L +T KV D ++ H D++E D +
Sbjct: 1268 ASQAEQFLDKQQRGDVVIRPSSKGPNHLAVTWKVDDKLFQHIDVLEVDADLNS----QSV 1323
Query: 1036 GKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTR 1095
GK L I + T+ DLDE++ ++ + ++ ++++ KF+ GS+ E+ L+ A P++
Sbjct: 1324 GKQLIIDKYTYADLDELIVNHVGAMARKVEELMAHEKFKHGSEDELHLFLKNFVAANPSK 1383
Query: 1096 IVYGFGISHEHPGTFILTYIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ-RH 1152
YGF ++ + PG F L ++ + N + + + P+G+ + L F+ RH
Sbjct: 1384 SAYGFTLNRKRPGHFNLCFLANKNSTVQTWPVRVTPQGYYLFDTPAAGVSELCDAFKVRH 1443
Query: 1153 IDDPQGDSAPSIRS---VAAMVPMRSPANGGST 1182
+ + Q + A P R+PA G +T
Sbjct: 1444 LHESQNLGGGGLGGKTPYGARTPARTPAAGHAT 1476
>gi|449547305|gb|EMD38273.1| hypothetical protein CERSUDRAFT_113442 [Ceriporiopsis subvermispora
B]
Length = 1565
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 315/1222 (25%), Positives = 555/1222 (45%), Gaps = 110/1222 (9%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS-ISKSLEAA 178
LW ++ + +K+ L +R+ AL + Y +R + + FD+ + K +E+
Sbjct: 412 LWRVYSVGQKFRSLMERRQALDALY--------------SRFGVQDEYFDNEVRKRVESV 457
Query: 179 ETEREV---------DDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
ET + +D K F E + + K P R + Y K+ + ++A
Sbjct: 458 ETVADATEWLGMKYREDQKNKIVFQFHDDEEQAEPKKRKLPSRISAYELAKKSVVSKLAQ 517
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF---KCAMFNSSQAVLQGARHMAAV 286
FG ++ L +E+P+ P A F A + +L AR + A
Sbjct: 518 GFGIQPHEVVLNFISANNSHFIEEPELNPLAYAEQFVDPDPAKALPADQLLARARMIIAT 577
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE-DAQW 345
E+ +P +R+ +R++F +A+VS PT G S ID H + K+L K + AQ+
Sbjct: 578 ELGKDPLLRQEMRNVFKTDALVSASPTDRGKSKIDEHHPYFNFKYLMNKRVTDMHRSAQF 637
Query: 346 LLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN 405
L I AE E L+ V+I LP + + + SD S +A+ WN++R ++++ L+
Sbjct: 638 LHILAAESEHLMTVSITLPAEVKAAFERRLNDAFASDSFSDTARAWNEERSRVVQETLEQ 697
Query: 406 FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACC 465
L+P +K R + A+ +L + ++L ++ V P++ + + P E P VLA
Sbjct: 698 HLIPIAIKWTREWLREEAEDYLAEQCAQSLRDRTDVAPFEPR--GLRPGE--TPTVLAMS 753
Query: 466 WGPGKPE---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQP 522
WG G+P + V +D +G LR D +E + +P
Sbjct: 754 WGKGEPHKDVISLVFMDEAGR-----------LREHTKLDNLVDTEMREEFRDIIQRRKP 802
Query: 523 HVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRIS 582
V+VLG +++ + L + E + E D E ++ ++Y + + R+Y++S +
Sbjct: 803 DVIVLGGFSIATSKLSQRVKEALKGPTE----DSSSESYDIPVIYVFDEVARMYQHSHRA 858
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK-YGMI 641
+++ K V L RY Q+PL A L G +I + L P EK +
Sbjct: 859 AEEFSALSPLAKYCVGLARYAQSPLNEYAAL---GADIAAISFDEDNQQLIPKEKLLSAL 915
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFV 700
E+V+VDVT++VG+DIN A+ + L F+ GLGPRKA L + + G + R F+
Sbjct: 916 ERVLVDVTSKVGVDINRAVTDSYYQHLLPFVCGLGPRKAQVLVKKIAALGGNLVNRDQFI 975
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQ-------FIDLLDDTRIHPESYGLAQELAK 753
L K+F+NA FL++ + + + D LD+TR+HPE Y LA+++A
Sbjct: 976 KNGLLTTKIFLNAAAFLKIAQDSEPKPAKNRHGEDIDVPDPLDNTRVHPEDYELARKMAT 1035
Query: 754 EVYNRDIEGDLNDDEDALEMA-IEHVRDRPDLLKTYLLDR---HIKEKKRENKRETLYLI 809
+ D E D++D+ + +A I ++ L LD ++ E ++ KR TL +I
Sbjct: 1036 DALELD-EEDIHDEHPSHVVAQIMQDPEKERKLDELNLDDFAVNMYETNQDKKRHTLTVI 1094
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
R EL+ F + R + +PS + M++GET TL G +V V R++ L+SG
Sbjct: 1095 RSELLSPFGELRRPFVQPSSWDVLTMLTGETPRTLRVGLIVSVLVVRIKPGFVAVRLDSG 1154
Query: 870 LAGMLMKEDYSD---DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNN 924
+ GM+ + +D D + +G I+ K+ +Q + + V L R +++ ++
Sbjct: 1155 IDGMINAQYLADTPVSPDDVVKKGQTIQGVIIDVKL-DLQSDLFWVELSSRPADVGAGDS 1213
Query: 925 RYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLS 984
+++ ++ D + H + R +E + +K E+ + R+I HP F N A +A + L
Sbjct: 1214 QFRRVKHDDAWDHTQ-YDRDAEMQARKKRAEVDR---TRRVIKHPNFHNFNAQQAEQYLD 1269
Query: 985 AKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED 1044
++ G+ +IRPSS+G ++L +T KV D ++ H D++E D VG K + G
Sbjct: 1270 KQQRGDVVIRPSSKGHNHLAVTWKVDDKLFQHIDVVEPNAD--PTGQTVG-SKLIVDGTH 1326
Query: 1045 TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISH 1104
F DLDE++ ++ + ++ ++++ KF+ GS+ ++ L+ A P + YGF ++
Sbjct: 1327 QFSDLDELIVNHVQAMARKVEELMAHEKFKHGSEDDLHLFLKNFVAANPAKSAYGFTLNR 1386
Query: 1105 EHPGTFILTYIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ-RHIDDPQGDSA 1161
+ PG F L ++ + N + + + P+ + + L F+ RHI +
Sbjct: 1387 KRPGHFSLCFLANKNSTVQTWPVRVTPEAYYLFDTPAAGVPELCDAFKVRHIHE------ 1440
Query: 1162 PSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGGR 1221
+ +AG GG T GG R+ PG T + GR
Sbjct: 1441 ------------------STNLAAGGALGGKTPYGGRTPARTPAPGHATPGHMSVRQVGR 1482
Query: 1222 DGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYDTPKWDSANKSGDDSWGNFPG- 1280
+P G G S+ S+ Y TP ++S +G PG
Sbjct: 1483 TPNPYGPGAAPSATPYGAPSSGYPGAPPSSLAMPYGGYQTPAYNSQPPAGGYPSQPPPGG 1542
Query: 1281 -AKAQNPAGREAFPG-GWGSSG 1300
A +P+ + G WGS G
Sbjct: 1543 VAPGVHPSRAQMIQGNAWGSGG 1564
>gi|299753367|ref|XP_001833229.2| transcription elongation factor SPT6 [Coprinopsis cinerea
okayama7#130]
gi|298410268|gb|EAU88502.2| transcription elongation factor SPT6 [Coprinopsis cinerea
okayama7#130]
Length = 1551
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 338/1269 (26%), Positives = 577/1269 (45%), Gaps = 142/1269 (11%)
Query: 27 STWIYNQL-LSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRK 85
+ W+ +L L T F G + H L ++ + L L + + ++P+I ++++
Sbjct: 327 AMWVTQRLPLRKTHQFFASDGEYQHLKSH-LVMA---VTFVLKSLFVDQYEVPYIWVHKR 382
Query: 86 EECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYK 145
+ D ND R L + LW I +L +K+ L +R+ L ++Y+
Sbjct: 383 DYISHF-----------DTNDPKNRFELLGLSE-LWIIMNLGQKYRSLLERRKTLTTFYE 430
Query: 146 KRYEEESRRIYDETRLALNQQLFDS--------ISKSLEAAE---------TEREVDDVD 188
RL +N + FDS I +A E E + +
Sbjct: 431 --------------RLQVNDEYFDSDLLPQVDSIEFVADATEWLTMKYRDRKEEQQQQPE 476
Query: 189 LKF-NLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
L+F + P EV + K P R + Y K+ + ++A FG Q+ M
Sbjct: 477 LRFHDDEEPQPEVK----KPKMPSRISAYEIAKKSIVSKLAEGFGIEPHQVVQNYF--NM 530
Query: 248 G----DELEDPKETPEEMASNF---KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
G +EDP+ P A + S +A+L AR + A E+ +P +RK +R
Sbjct: 531 GAVNTHYVEDPELNPIAFAEQYVDPDPVKAQSPEALLARARMVMATELGKDPLLRKEIRK 590
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE-DAQWLLIQKAEEEKLLQV 359
+F + A++S PT G + ID H + K+L K ++ +Q+LLI AE E L+ V
Sbjct: 591 LFQEEALISVEPTERGIAKIDDHHPYFNFKYLFRKRVKDMTTSSQFLLILTAEAEHLVTV 650
Query: 360 TIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLM 419
++ LP L + SD S SA+ WN +R L++++ L+ L+ VK R +
Sbjct: 651 SVFLPPAVLQTFEKRLSDAICSDSFSDSAKAWNMERNLVVQEVLEKHLIAVGVKWTREWL 710
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE---TTFV 476
+ +L + + L +V V PY R+ + E A VLA WG G P T V
Sbjct: 711 RDEVEDFLAQKCAEKLRERVDVAPYMRRS---LGEGEYASSVLAVSWGKGDPHKDPITMV 767
Query: 477 MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTS 536
LD++G LR+Q D +++ + + +P ++V+G +++
Sbjct: 768 FLDTAGR-----------LRAQTKIDNLYDQDNLDEFHDLIGQKRPDIIVIGGFSMATVK 816
Query: 537 LKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA 596
LK I E++ + ++++ Y + + R+Y++S ++++ K
Sbjct: 817 LKQRITEVLSAQAYSQDGALIRPEFQINVNYVPDDVARIYQHSERATEEFSSLSLTAKYC 876
Query: 597 VALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM-IEQVMVDVTNQVGLD 655
V L RY+Q+PL A L G ++ + + L P EK + +E+V+VDVTN VG++
Sbjct: 877 VGLARYMQSPLNEFAAL---GPDVAAISFDEEDQHLVPKEKLLLALERVLVDVTNAVGVN 933
Query: 656 INLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAV 714
IN ++ + LQF+ GLGPRKA +L + G + R+ F+ A L K+F+NA
Sbjct: 934 INRSVSDPYYQHLLQFVCGLGPRKANALVAKIASLGGNLVNREQFIKAGVLTTKIFLNAA 993
Query: 715 GFLRV-------RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDD 767
GFLR+ R D LDDTRIHPE Y LA+++A + D E D++D+
Sbjct: 994 GFLRITQYKGEARLDKHRHDDDNAPDPLDDTRIHPEDYELARKMATDALELD-EEDIHDE 1052
Query: 768 EDALEMAIEHV-RDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQ 823
+ + + V R+R L LD + E ++ KR TL LIR EL+H F D R
Sbjct: 1053 HPSHVVNLIMVDREREKKLMELNLDEFAISLYEANQDQKRHTLSLIRNELLHPFADQRRL 1112
Query: 824 YKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKE---DYS 880
++ P E M+SGET TL G +V A V R+ L+SG+ + + D
Sbjct: 1113 FRFPEGWEIITMLSGETPRTLRVGVIVSAVVNRINSGFVNVRLDSGIEATINAQYIADKP 1172
Query: 881 DDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN-----NRYQHCQNLDPY 935
D+ + G I+ C+I+ K V L R E+++ R H ++ +
Sbjct: 1173 DNPNKLVKKGQTVTGVIIDCRIEEDNKETLFVELSTRNREVQDGDQAFRRVAHDEHWNQA 1232
Query: 936 YHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRP 995
H++ + + + K R++ + ++ R+I HP F N +A L ++ G+ +IRP
Sbjct: 1233 QHDK--DKDALERKKRQQTDRSR-----RVIKHPNFHNFNYAQAEAYLEKQQRGDVVIRP 1285
Query: 996 SSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED-TFEDLDEVVD 1054
SSRG +L +T KV G+Y H D++E D + G L + ++ + DLDE++
Sbjct: 1286 SSRGNDHLAVTWKVDTGLYQHIDVVEKNPDPTGQTA----GGQLYVDDNHVYADLDELIV 1341
Query: 1055 RYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++ + ++ ++++ KF+ G++ ++ L+ A P + +YGF ++ + PG F L +
Sbjct: 1342 NHVQAMARRVEDLMNHEKFKPGTEEDLHLFLKNFLAANPMKSMYGFTLNRKKPGNFSLCF 1401
Query: 1115 IRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ-RHIDDPQGDSAPSIRSVAAMV 1171
+ + N + I + P+ + + L F+ RH+ + Q +A +
Sbjct: 1402 LANKNSTVQTWPIRVTPEAYYLFDASAVGVSELCDAFKVRHLHESQTRAAQA-------- 1453
Query: 1172 PMRSPANGGSTA-SAGSGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPR 1230
NGG T AG G + G ++TPG + R+ R GH +P+
Sbjct: 1454 -----QNGGKTPFGAGHGRTPARPIG------AATPGHASVRHVGRTPNPY-GHNPMVPQ 1501
Query: 1231 -PYGGRGRG 1238
PYG G
Sbjct: 1502 PPYGSSTYG 1510
>gi|403417912|emb|CCM04612.1| predicted protein [Fibroporia radiculosa]
Length = 1551
Score = 372 bits (954), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 312/1163 (26%), Positives = 548/1163 (47%), Gaps = 107/1163 (9%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L L +Q+ ++P+I ++++ + + +V N D+ LW ++ +
Sbjct: 366 LRFLFVQEFEVPYIWTHKRDYITYFNPEELKTQVELLNLDE------------LWRVYTV 413
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFD-SISKSLEAAETEREV- 184
+K+ L +R+SAL S Y RL + F+ I K +E+ E +
Sbjct: 414 GQKYRSLSERRSALDSMY--------------GRLGATDEYFEHEIRKRIESVEMVADAT 459
Query: 185 --------DDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
DD + + L F E +D + K P R + Y K+ KFG
Sbjct: 460 EWLGMKYRDDSNSRAALRFHDDEEQMDIKKPKMPSRISAYELAKKS------IKFGIQPH 513
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQA---VLQGARHMAAVEISCEPC 293
+ L E ++DP+ P A F N +Q+ +L AR + A E+ +P
Sbjct: 514 ETVLNFISENKSHFVDDPELNPLAYAEQFADPDANRAQSPEELLARARMILATELGKDPL 573
Query: 294 VRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREK-PLRKFEDAQWLLIQKAE 352
+R+ +R++F +A VS PT G + ID + + K+L K + AQ+L I +AE
Sbjct: 574 LRQEMRNLFKMDARVSVLPTERGITKIDEHNPYFNFKYLHNKRAVDMLRTAQFLHILQAE 633
Query: 353 EEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
+ L+ V++ LP D+ + + + SD S +A+ WN++R ++++ L+ L+P V
Sbjct: 634 AQHLVTVSVTLPADAKSTFERRLNDAFASDSYSDTARAWNEERSRVIQETLEQHLMPIGV 693
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE 472
K R + A+ +L + L ++ V PY + D+ P E AP VLA WG G+P
Sbjct: 694 KWTREWIREEAEEFLADRCAQTLRERIDVAPY--ANTDMRPGE--APSVLAMSWGKGEPH 749
Query: 473 ---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA 529
T V +D +G LR D ++++ + + +P V+V+G
Sbjct: 750 KDVITVVFIDEAGR-----------LREHTRIDNLVDSDNRDEFVDILKRRKPDVIVVGG 798
Query: 530 VNLSCTSLKDDIYEIIFKMVEE---HPRDVGHEMDELSI--VYGDESLPRLYENSRISSD 584
+++ L + + E P D E D L+I +Y + + R+Y++S+ +++
Sbjct: 799 FSIATAKLASRVKAAVKNPNGEPLSDPADARPE-DSLNIPVIYVLDEVARIYQHSKRAAE 857
Query: 585 QLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK-YGMIEQ 643
+ K V L RY Q+PL A L G +I + L P EK +E+
Sbjct: 858 EFSALSPLAKYCVGLARYTQHPLNEYAAL---GADIKASLFDEDNQHLIPTEKLLSALER 914
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTA 702
V+VDVTN+VG+DIN A+ + L F+ GLGPRK+ L + + G + R FV
Sbjct: 915 VLVDVTNKVGVDINRAVTDPYYQHMLPFVCGLGPRKSQVLVKKIASMGGNLVNRDQFVKN 974
Query: 703 HGLGKKVFVNAVGFLRVRRSGQAASSSQ-------FIDLLDDTRIHPESYGLAQELAKEV 755
L K+F+NA GFLR+ + + D LD TRIHPE Y LA+++A +
Sbjct: 975 TLLTTKIFLNAAGFLRIVQDSEPKPIKNRHNEDLDAPDPLDSTRIHPEDYELARKMATDA 1034
Query: 756 YNRDIEGDLNDDED----ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRR 811
D E D++D+ AL MA + D L ++ E ++ KR TL +IR
Sbjct: 1035 LELD-EEDIHDEHPSHVVALIMADPENERKLDELNLDDFAVNMYETNQDKKRHTLNIIRS 1093
Query: 812 ELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLA 871
EL+ F + R + P+ +E M++GET TL G +V V R + L+SG+
Sbjct: 1094 ELLKPFGEEREPFPLPAAEEILTMLTGETMRTLRVGLIVSVLVLRAKQHFVAVRLDSGID 1153
Query: 872 GMLMKEDYSD----DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNNR 925
G + + +D + D S + +G I+ K++ ++ + + V L R +++ +++
Sbjct: 1154 GHINSQYLADHAVGNPGDVVKSGQTMQGVIIDVKLE-LENDSFWVELSSRPADVGAGDSQ 1212
Query: 926 YQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSA 985
++ ++ D + HE+ SR +E + +K E+ K R+I HP F N A +A + L
Sbjct: 1213 FRRVKHDDAWDHEQH-SRDTEIQARKKRAEVDK---TRRVIKHPNFHNFNAQQAEQYLDK 1268
Query: 986 KEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDT 1045
++ G+ +IRPSS+G ++L +T KV + ++ H D++E D VG GK + G
Sbjct: 1269 QQRGDVVIRPSSKGVNHLAVTWKVDEKLFQHIDVVEPNAD--PTGQTVG-GKLIVDGTHQ 1325
Query: 1046 FEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHE 1105
+ DLDE++ ++ + ++ ++++ KF+ G++ ++ L+ A P + YGF ++ +
Sbjct: 1326 YSDLDELIVNHVSAMARKVEELMAHEKFKHGAEDDLHLFLKNFVAANPAKSAYGFTLNRK 1385
Query: 1106 HPGTFILTYIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ-RHIDDPQGDSAP 1162
PG F L ++ + N + + + P+ + + L F+ RHI + +
Sbjct: 1386 RPGHFSLCFLANKNSTVQTWPVRVTPEAYYLFDTPATGVSELCDAFKVRHIHESKNLGGG 1445
Query: 1163 SIRS---VAAMVPMRSPANGGST 1182
+ A P R+PA G +T
Sbjct: 1446 GLGGKTPFGARTPARTPAPGHAT 1468
>gi|291224961|ref|XP_002732470.1| PREDICTED: abnormal EMBroygenesis family member (emb-5)-like, partial
[Saccoglossus kowalevskii]
Length = 1397
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 300/1129 (26%), Positives = 508/1129 (44%), Gaps = 158/1129 (13%)
Query: 18 TDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR----------DDIMRFL 67
T E + DE+ WIY TLP+ Q P +S I L
Sbjct: 294 TKDEELDDEAEWIYKHAFM-TLPITMQ-DVSDPLRSETSQVSSTFESKGPSTVSKIKEAL 351
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+ ++PFIA YRKE P L + LW I+ D
Sbjct: 352 NFIRNQQFEVPFIAFYRKEYI----------------------EPELNIYD-LWKIYHWD 388
Query: 128 KKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAETEREV 184
+KW L+ RK L+ ++K + I + +L L ++ + L+A ++ E+
Sbjct: 389 EKWTQLRNRKLNLKRLFEKMQNYQFELIPHDVDASLPDNIRPLTETDMERLDAVQSPEEL 448
Query: 185 DDVDLKFNLHF---------------------------PPGEVGVDE------------G 205
DV ++F L++ GEV V++
Sbjct: 449 KDVYMQFLLYYGRDIPKMQNAEKVRKRKVKREEAGEDGEDGEVVVEDKEEPTEDVSGTSK 508
Query: 206 QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF 265
+ K+ R Y C +AGL VA KFG + EQ G L + + P E++
Sbjct: 509 EIKQAARKGMYGLCEQAGLDGVAKKFGLTPEQFGENLRDNYQRHDTDQWPSEPSELSQEH 568
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQ 325
C+ F + VL+GA +M A++++ +P VR+ VR + + A +S PT G ID H
Sbjct: 569 LCSQFPTEDNVLRGAIYMVAMQLAHDPLVRQCVRQTYYERAKISVIPTKKGIKEIDESHN 628
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL---PEDSLNKLFSDCKEHYLSD 382
+K+L+ KP+R Q+L + AEE+KLL+ TI + + F + K+ Y D
Sbjct: 629 CFLMKYLKNKPVRDLAGEQYLKLHLAEEDKLLKTTIGIDMEEQPGYQTYFDEIKQLYYRD 688
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
S Q WN R ++ AL+ L P M KE R + +K ++ + +N + +
Sbjct: 689 EFSHMVQEWNKLRTEAIEKALNKILYPHMEKELRGKLLKESKDCIIKASTRTAFNWIKIA 748
Query: 443 PYQRKDNDITPDE------EAAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTL 495
PYQ DE +VL + K F ++D GEV D + + L
Sbjct: 749 PYQADQQMDDDDEFLDGPGPMGLKVLGIAYSDDKKVPAFGALIDGDGEVQDFIRLPDIML 808
Query: 496 RSQNV--RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
R + R++ K+ D E+L F+ +PHV+ +GA + L DI + ++ E
Sbjct: 809 RRNSYWKRERDGKEADMEKLKDFISKKKPHVIAVGAESREAIGLIQDIKRCLTELESE-- 866
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
++ +++ D +L +Y NS++ ++ +++A+++ R LQ+PL + L
Sbjct: 867 ----EQLPPINVELVDNNLATIYCNSKLCENEFREYPTCLRQALSIARRLQDPLVEFSRL 922
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFIS 673
C +IL + +++ + +E I V N++GLD+N I+ +QF+
Sbjct: 923 CNSDEDILCLQFHRMQDEVPKEELLYYIYLEFVFRVNEIGLDVNKCINHPHTQQLVQFVC 982
Query: 674 GLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
GLGPRK L R L + R VTA +G KVF+N GF+++ + S+ +I
Sbjct: 983 GLGPRKGMHLLRQLKSNNMRLENRTQLVTACNMGPKVFINCAGFIKIDTNAMGDSTDSYI 1042
Query: 733 DLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDR 792
++LD +R+HPE+Y A+++A + D + N+ ALE +E+ PD LK LD
Sbjct: 1043 EVLDGSRVHPETYEWARKMAVDALEYDESAEENNPAGALEEILEN----PDKLKDLDLDA 1098
Query: 793 HIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
+E +R+ NK TLY IR EL ++D R + P+ +E F M++ ET +T G++
Sbjct: 1099 FAEELERQGYGNKGITLYDIRAELNCRYKDLRVPFHSPTPEERFAMLTKETPETFYVGKM 1158
Query: 850 VQATV-----RRVQGQR-----------------AICV---------------------- 865
V V RR +G++ C+
Sbjct: 1159 VLCKVTGIAHRRPRGEQLDQANPVKIDETGLWQCPFCLQDTFPELSEVWSHFDGNKCPGS 1218
Query: 866 -------LESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
L++G+ G + + SD + ++ E D++ G + C++ + + QV L CR
Sbjct: 1219 AVGVKARLDNGVTGFIPTKMISDKNVKNPE--DRVQIGMSIHCRVTKLDTEKLQVDLTCR 1276
Query: 918 ESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTAD 977
S++ + + + D YY + + + ++ +K+ + + K R+IVHP F N+
Sbjct: 1277 SSDLADRNGEWIPSRDIYYDYDVEKKLTNKDDVGNKKQQRRAYVK-RVIVHPSFHNIDYK 1335
Query: 978 EAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDH 1026
+ K++ E GE I+RPSS+G +LT+T KV DG+ H D+ E GK++
Sbjct: 1336 QTEKMMENMEQGEVIVRPSSKGQDHLTVTWKVDDGICQHIDVREEGKEN 1384
>gi|308487614|ref|XP_003106002.1| CRE-EMB-5 protein [Caenorhabditis remanei]
gi|308254576|gb|EFO98528.1| CRE-EMB-5 protein [Caenorhabditis remanei]
Length = 1521
Score = 370 bits (949), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 306/1196 (25%), Positives = 537/1196 (44%), Gaps = 159/1196 (13%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
++RF+ + ++PFI YRKE +LL +NN LW
Sbjct: 355 VLRFI-RVRSNSFEVPFIGFYRKESIDNLLT------LNN-----------------LWT 390
Query: 123 IHDLDKKWLLLQKRKSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAET 180
++D D+KW L ++K+ L ++ Y+E S + + R L + + ET
Sbjct: 391 VYDFDEKWCHLSEKKTKLYDLMRRMREYQELSDDLTAKRRPISEMDLIE-----INFTET 445
Query: 181 EREVDDVDLKFNLHF-----------PPGEVGVDEGQYKRPK-----RSTKYSSCSKAGL 224
++ D+ F L + G +EG R K R+ KY C + G+
Sbjct: 446 LEQLTDIHANFQLLYGALLEDMTKWEKARRTGEEEGHEYRAKFKSSIRNDKYQMCVENGI 505
Query: 225 WEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMA 284
E+A +FG +++Q L K ++E P + A + C F + VL GA+ M
Sbjct: 506 GELAGRFGLTAKQFAENLDWRKH--DIEQDTAFPLDAAEEYICPAFMDRETVLNGAKFML 563
Query: 285 AVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ 344
A EIS +P VR +R F +NA PT G ID H ++++ KP+R + +
Sbjct: 564 AKEISRQPLVRNRIRQEFRNNAHFWVKPTKKGRETIDESHPLFDKRYIKNKPIRNLTEEE 623
Query: 345 WLLIQKAEEEKLLQVTIKLPEDS--------LNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
+L KA+E+ L+ + D +NK SD + D +++ + WN R+
Sbjct: 624 FLYYHKAKEDGLIDMVFMYESDEDQEANNYLVNKFLSDSI--FRKDEYTENVEQWNAVRD 681
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ-----RKDNDI 451
+ A++ L+P M E + + AK+ + + K +++S +Q D+D
Sbjct: 682 ECVSMAINEMLVPYMRDEVYNTILEEAKTAVAKKCRKEFASRISRSGFQPENDNHDDDDD 741
Query: 452 TPDEEAAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQ 510
D+ A R++A C+ + E +F VM+D +G +VD L T R+ + + K +
Sbjct: 742 DVDDHGARRIMAVCYSTVREEASFGVMVDENGSIVDYLRMVHFTKRTMAQGNTGALKRES 801
Query: 511 ERLL-KFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGD 569
L KF+ +PH + L ++ CT LK D+ E + ++ ++ + ++ + D
Sbjct: 802 MDLFKKFVQRRRPHAIGLNIEDMDCTRLKRDLEEAVQELYSQN-----MIIRQIPVFLMD 856
Query: 570 ESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLE 629
++Y S IS + P +++AV+L R L +P+ A L +I L PL+
Sbjct: 857 NEAAKVYMRSNISVAENPDHPPTLRQAVSLARILLDPIPEYAHLWNSDEDIFCLSLHPLQ 916
Query: 630 NFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-V 688
+ ++ ++ +V+ N+ G+DIN LQF GLGPRKA +L +S+
Sbjct: 917 REIDQEQLALVLNHELVNKVNEEGVDINKCAEFPHYTNMLQFTCGLGPRKATALLKSIKA 976
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
I +R V LG KVF+N GF+R+ + + ++++LD +R+HPE+Y A
Sbjct: 977 NDNLIESRSKLVVGCKLGPKVFMNCAGFIRIDTHKVSDKTEAYVEVLDGSRVHPETYEWA 1036
Query: 749 QELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRET 805
+++A + D D A++ + + PD L+ LD E R+ K+ T
Sbjct: 1037 RKMAVDALEVDDSADPT-------AALQEIMESPDRLRDLDLDAFADELNRQGFGEKKST 1089
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ----GQR 861
LY I EL ++D R + EP + E+ Y + + EG V TV+ VQ Q
Sbjct: 1090 LYDISSELSARYKDLREPFLEP-RGEDLYNLLARCGKEIKEGSKVLGTVQSVQYRKVDQE 1148
Query: 862 AI---------------CV----------------------------------LESGLAG 872
AI C ++G+ G
Sbjct: 1149 AIGSMIPESIDDRFKCPCCKTFIADSPAGIQEHLVNGAHNGGCPGTAVGIRVRFDNGMTG 1208
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNL 932
++ S D+ L+ ++ K+ + K R+ +FL C+ ++++++
Sbjct: 1209 FCPNKNISSSHIDNPLT-RVKINQPYYFKVLKLDKERFSLFLSCKSTDLKDD-------- 1259
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFK----ERLIVHPCFQNVTADEAMKLLSAKEP 988
DP ++ +Q+ ++ K KK +R+I HP F NV+ + A K+L +
Sbjct: 1260 DPGQRDDFWDQQTYEDDLTDMKNETKKKESNTRVKRVIAHPNFHNVSYESATKMLDGMDW 1319
Query: 989 GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFED 1048
+ IIRPS+ S L++T K+ D VY + + E KD + IG+ L +G + FED
Sbjct: 1320 TDCIIRPSANKDSGLSVTWKICDRVYHNFFVKESAKDQ-----VFSIGRQLSVGGEDFED 1374
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRK-FRKGS--KAEVDELLRIEKAEFPTRIVYGFGISHE 1105
LDE++ R++ PL+ + +++ F +G+ +E E EK R Y F S+
Sbjct: 1375 LDELIARFVQPLIQVSHDITTHKYFFTRGTCEDSEAVEAFVHEKKRELGRSPYVFSASYR 1434
Query: 1106 HPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGD 1159
P F ++Y+ + HEY + P G +FR + F+ ++R++ +F+RH +P +
Sbjct: 1435 QPCQFCISYMFDNTNRIRHEYFKIVPGGVRFRHQNFDSLERMLVWFKRHFHEPPAE 1490
>gi|82582262|sp|Q93148.2|SPT6H_CAEBR RecName: Full=Suppressor of Ty 6 homolog; AltName: Full=Abnormal
embryogenesis protein 5
Length = 1521
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 308/1194 (25%), Positives = 537/1194 (44%), Gaps = 156/1194 (13%)
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
++PFI YRKE +LL +NN LW ++D D+K+ L
Sbjct: 366 FEVPFIGFYRKESIDNLLT------MNN-----------------LWIVYDYDEKYCHLS 402
Query: 135 KRKSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
++K L ++ Y+E S I + R L D + AET ++ D+ F
Sbjct: 403 EKKRRLYDLMRRMREYQELSDDITAKRRPINEMDLID-----INFAETLEQLTDIHANFQ 457
Query: 193 LHF----------------PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
L + GE ++K R+ KY C + G+ E+A +FG +++
Sbjct: 458 LLYGSLLEDMTKWEKERRAADGEETEYRAKFKSSIRNDKYQMCVENGIGELAGRFGLTAK 517
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
Q L K +++ P E A + C F + VL GA+ M A EIS +P VR
Sbjct: 518 QFAENLDWRKH--DIDQDSAFPLEAAEEYICPAFIDRETVLNGAKFMLAKEISRQPLVRS 575
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
VR F DNA PT G ID H ++++ KP+R D ++L KA+++ L
Sbjct: 576 RVRQEFRDNAHFWVKPTKKGRDTIDETHPLFNKRYIKNKPIRNLTDEEFLYYHKAKQDGL 635
Query: 357 LQVTIKLPEDSLNKLFSDCKEHYLSDGV------SKSAQLWNDQRELILKDALDNFLLPS 410
+ + + D + +LSD + + + + WN R+ + A+ L+P
Sbjct: 636 IDMVLMYESDEDQAANQFLVKKFLSDSIFRKDEYTDNVEQWNAVRDQCVNMAITEMLVPY 695
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVG---PYQRKDNDITPDEEAAPRVLACCWG 467
M +E + + AK + + K ++++ P + K ++ + A R++A C+
Sbjct: 696 MKEEVYNTILEEAKMAVAKKCKKEFASRIARSGYVPEKEKLDEEDEEHSARRRMMAICYS 755
Query: 468 PGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLK-FMMDHQPHVV 525
P + E +F VM+D +G +VD L T R + + K + L K F+ +PH +
Sbjct: 756 PVRDEASFGVMVDENGAIVDYLRMVHFTKRGHGGGNTGALKEESMELFKKFVQRRRPHAI 815
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
L ++ CT LK D+ E + ++ + ++++ D L ++Y S IS +
Sbjct: 816 ALNIEDMECTRLKRDLEEAVAELYSQ-----SKIFSQINVYLMDNELAKVYMRSNISIAE 870
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
P +++AV+L R L +P+ A L +I L PL+ + + ++ +
Sbjct: 871 NPDHPPTLRQAVSLARQLLDPIPEYAHLWNSDEDIFCLSLHPLQRDIDQEILAQLLNHEL 930
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG 704
V+ N+ G+DIN LQF GLGPRKA SL +S+ I +R V
Sbjct: 931 VNRVNEEGVDINKCAEFPHYTNMLQFTCGLGPRKATSLLKSIKANDNLIESRSKLVVGCK 990
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDL 764
LG KVF+N GF+R+ + + ++++LD +R+HPE+Y A+++A + D D
Sbjct: 991 LGPKVFMNCAGFIRIDTRRVSDKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDDSADP 1050
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWR 821
A++ + + P+ L+ LD E R+ K+ TLY I EL ++D R
Sbjct: 1051 T-------AALQEIMETPERLRDLDLDAFADELNRQGFGEKKATLYDISSELSERYKDLR 1103
Query: 822 N----------------------------------QYKEPSQDEEFYMISGETED----- 842
QY++ +D MI TE+
Sbjct: 1104 APFVEPSGEALYDLLTRSGKEVKVGCKMLGTVQSVQYRKVERDTIDSMIPEHTEEDQYIC 1163
Query: 843 ------TLAEGRVVQATVRRVQGQRAICV---------LESGLAGMLMKEDYSDDWRDSE 887
T A+ + V+ + G+ CV L++G+ + S D+
Sbjct: 1164 PSCKIFTAADPQSVREHLLNA-GRPGGCVGSACGIRVRLDNGMTAFCPNKFISSSHVDNP 1222
Query: 888 LSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQ 947
L+ ++ K+ +I K ++ + L C+ S+++ + D ++ ++ Q +
Sbjct: 1223 LT-RVKLNQPYWFKVMAINKEKFSILLSCKSSDLKED---APAERDDFWDQQ----QYDD 1274
Query: 948 EKARKEKELAKKHFKE----RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYL 1003
+ A +KE KK + R+I HP F NV+ + A K+L + + IIRPS+ S L
Sbjct: 1275 DVAAMKKETTKKKDADTRVKRVIAHPNFHNVSYEAATKMLDEMDWSDCIIRPSANKESGL 1334
Query: 1004 TLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSH 1063
++T K+ D +Y + + E KD + IG+TL +G + FEDLDE++ R++ P++
Sbjct: 1335 SVTWKICDRIYHNFFVKESAKDQ-----VFSIGRTLSVGGEDFEDLDELIARFVLPMIQI 1389
Query: 1064 LKAMLSYRK-FRKGSKAEVD--ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI--RST 1118
+ +++ F +G+ + D E EK R Y F S+ P F ++Y+ S
Sbjct: 1390 SHEITTHKYFFTQGTSEDTDQVETFVHEKRRELGRSPYVFSASYRQPCQFCISYMFDNSN 1449
Query: 1119 NPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP 1172
HE+ + P+G +FR++ F+ +DR++A+F+RH ++P P IRS + P
Sbjct: 1450 RIRHEHFKISPRGIRFRQQNFDSLDRMMAWFKRHFNEP----PPGIRSSLSYRP 1499
>gi|268574172|ref|XP_002642063.1| C. briggsae CBR-EMB-5 protein [Caenorhabditis briggsae]
Length = 1521
Score = 369 bits (948), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 308/1194 (25%), Positives = 537/1194 (44%), Gaps = 156/1194 (13%)
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
++PFI YRKE +LL +NN LW ++D D+K+ L
Sbjct: 366 FEVPFIGFYRKESIDNLLT------MNN-----------------LWIVYDYDEKYCHLS 402
Query: 135 KRKSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
++K L ++ Y+E S I + R L D + AET ++ D+ F
Sbjct: 403 EKKRRLYDLMRRMREYQELSDDITAKRRPINEMDLID-----INFAETLEQLTDIHANFQ 457
Query: 193 LHF----------------PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
L + GE ++K R+ KY C + G+ E+A +FG +++
Sbjct: 458 LLYGSLLEDMTKWEKERRAADGEETEYRAKFKSSIRNDKYQMCVENGIGELAGRFGLTAK 517
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
Q L K +++ P E A + C F + VL GA+ M A EIS +P VR
Sbjct: 518 QFAENLDWRKH--DIDQDSAFPLEAAEEYICPAFIDRETVLNGAKFMLAKEISRQPLVRS 575
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
VR F DNA PT G ID H ++++ KP+R D ++L KA+++ L
Sbjct: 576 RVRQEFRDNAHFWVKPTKKGRDTIDETHPLFNKRYIKNKPIRNLTDEEFLYYHKAKQDGL 635
Query: 357 LQVTIKLPEDSLNKLFSDCKEHYLSDGV------SKSAQLWNDQRELILKDALDNFLLPS 410
+ + + D + +LSD + + + + WN R+ + A+ L+P
Sbjct: 636 IDMVLMYESDEDQAANQFLVKKFLSDSIFRKDEYTDNVEQWNAVRDQCVNMAITEMLVPY 695
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVG---PYQRKDNDITPDEEAAPRVLACCWG 467
M +E + + AK + + K ++++ P + K ++ + A R++A C+
Sbjct: 696 MKEEVYNTILEEAKMAVAKKCKKEFASRIARSGYVPEKEKLDEEDEEHSARRRMMAICYS 755
Query: 468 PGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLK-FMMDHQPHVV 525
P + E +F VM+D +G +VD L T R + + K + L K F+ +PH +
Sbjct: 756 PVRDEASFGVMVDENGAIVDYLRMVHFTKRGHGGGNTGALKEESMELFKKFVQRRRPHAI 815
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
L ++ CT LK D+ E + ++ + ++++ D L ++Y S IS +
Sbjct: 816 ALNIEDMECTRLKRDLEEAVAELYSQ-----SKIFSQINVYLMDNELAKVYMRSNISIAE 870
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
P +++AV+L R L +P+ A L +I L PL+ + + ++ +
Sbjct: 871 NPDHPPTLRQAVSLARQLLDPIPEYAHLWNSDEDIFCLSLHPLQRDIDQEILAQLLNHEL 930
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG 704
V+ N+ G+DIN LQF GLGPRKA SL +S+ I +R V
Sbjct: 931 VNRVNEEGVDINKCAEFPHYTNMLQFTCGLGPRKATSLLKSIKANDNLIESRSKLVVGCK 990
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDL 764
LG KVF+N GF+R+ + + ++++LD +R+HPE+Y A+++A + D D
Sbjct: 991 LGPKVFMNCAGFIRIDTRRVSDKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDDSADP 1050
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWR 821
A++ + + P+ L+ LD E R+ K+ TLY I EL ++D R
Sbjct: 1051 T-------AALQEIMETPERLRDLDLDAFADELNRQGFGEKKATLYDISSELSERYKDLR 1103
Query: 822 N----------------------------------QYKEPSQDEEFYMISGETED----- 842
QY++ +D MI TE+
Sbjct: 1104 APFVEPSGEALYDLLTRSGKEVKVGCKMLGTVQSVQYRKVERDTIDSMIPEHTEEDQYIC 1163
Query: 843 ------TLAEGRVVQATVRRVQGQRAICV---------LESGLAGMLMKEDYSDDWRDSE 887
T A+ + V+ + G+ CV L++G+ + S D+
Sbjct: 1164 PSCKIFTAADPQSVREHLLNA-GRPGGCVGSACGIRVRLDNGMTAFCPNKFISSSHVDNP 1222
Query: 888 LSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQ 947
L+ ++ K+ +I K ++ + L C+ S+++ + D ++ ++ Q +
Sbjct: 1223 LT-RVKLNQPYWFKVMAINKEKFSILLSCKSSDLKED---APAERDDFWDQQ----QYDD 1274
Query: 948 EKARKEKELAKKHFKE----RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYL 1003
+ A +KE KK + R+I HP F NV+ + A K+L + + IIRPS+ S L
Sbjct: 1275 DVAAMKKETTKKKDADTRVKRVIAHPNFHNVSYEAATKMLDEMDWSDCIIRPSANKESGL 1334
Query: 1004 TLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSH 1063
++T K+ D +Y + + E KD + IG+TL +G + FEDLDE++ R++ P++
Sbjct: 1335 SVTWKICDRIYHNFFVKESAKDQ-----VFSIGRTLSVGGEDFEDLDELIARFVLPMIQI 1389
Query: 1064 LKAMLSYRK-FRKGSKAEVD--ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI--RST 1118
+ +++ F +G+ + D E EK R Y F S+ P F ++Y+ S
Sbjct: 1390 SHEITTHKYFFTQGTSEDTDQVETFVHEKRRELGRSPYVFSASYRQPCQFCISYMFDNSN 1449
Query: 1119 NPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP 1172
HE+ + P+G +FR++ F+ +DR++A+F+RH ++P P IRS + P
Sbjct: 1450 RIRHEHFKISPRGIRFRQQNFDSLDRMMAWFKRHFNEP----PPGIRSSLSYRP 1499
>gi|196011000|ref|XP_002115364.1| hypothetical protein TRIADDRAFT_59208 [Trichoplax adhaerens]
gi|190582135|gb|EDV22209.1| hypothetical protein TRIADDRAFT_59208 [Trichoplax adhaerens]
Length = 1541
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 327/1271 (25%), Positives = 583/1271 (45%), Gaps = 211/1271 (16%)
Query: 5 ECRSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIM 64
E LRK +A D + +ES WIY+Q P +G G L I+ +
Sbjct: 259 ERHQLRK-IAVTKADDTELDNESQWIYSQAFMN--PSISNQGINY-GSGSQLMIT---VR 311
Query: 65 RFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L L+ + L+IPFIA YRKE + ++ + D+ LW I+
Sbjct: 312 EILALIRNEGLEIPFIAHYRKE--------IYRHSLQVDD---------------LWRIY 348
Query: 125 DLDKKWLLLQKRKSALQSYYKK--RYE-EESRRIYDETRLALNQQLFDSISKS-LEAAET 180
+ D KW+ +RK + + K +Y+ ++++ +D + N ++ D+ + LE T
Sbjct: 349 NWDIKWMYFSRRKQNMAKLFAKVQQYQYDKAKNTHDFS--TFNAKIIDAEDTARLEECNT 406
Query: 181 EREVDDVDLKFNLHF------------PPGEVGVDEGQ-----------YKRPKRSTKYS 217
E+ DV F L+ D+ Q +R +R Y+
Sbjct: 407 YEELQDVYTHFLLYHHKELEDLRNDASKKTTNSDDKNQSDNNEKRSGESIRRLRRRNFYT 466
Query: 218 SCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVL 277
C + +A KFG S E+ G + +E + P A ++ F + +AVL
Sbjct: 467 RCEDNKISHLALKFGLSPERFGKNVIESYQINEPTQYEIDPNTTARDYITKAFPTVEAVL 526
Query: 278 QGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPL 337
A + AV++S +P VR+ VR F + A +S PT G
Sbjct: 527 DAAVYTVAVQLSRDPLVRRAVRLAFYERAKISCRPTKRG--------------------- 565
Query: 338 RKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSD-CKEHYLSDGVSKSAQLWNDQR 395
+KAE+E + T + P S ++D K++Y DG S + WN+ R
Sbjct: 566 -----------KKAEKEGFITHTFSVEPSASSWGSYADELKQYYFVDGFSDLIKEWNELR 614
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR-KDNDITPD 454
++ A+++ L KE + + + +++ E + +++V ++ +ND +
Sbjct: 615 GRAVQKAVEDVLFEEFRKELQEKLLRESYEYVIKECCCNVRKRINVASFKIGSENDEDDE 674
Query: 455 EEAAPRVLACCWGPGKPETTFV-MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERL 513
E R+++ + + ++ ++D GE+ ++ +L
Sbjct: 675 MEPYQRIMSFAFVSDRDIASYACVIDGHGEIKEI------------------------KL 710
Query: 514 LK-FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESL 572
+K ++ QP + + A T +K D+ I+ ++ E ++ +S+ D +
Sbjct: 711 IKGLIVSKQPVAIAISASCRQATGVKKDLEGIVNELQSEE------DLPPISVELIDPCI 764
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL-CGPGREILSWKLCPLENF 631
PRL+E+S+ + ++ P + A++L RY+Q PL ++ L EIL +L L+
Sbjct: 765 PRLFESSKRAKNEFPEYPPLLCHAISLARYMQEPLLELSQLLTSDDEEILCLRLHILQAE 824
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA-ASLQRSLVRA 690
+ + + ++ N +G+D+NL + E + L F+ GLGPRKA A L+
Sbjct: 825 IPKPDLMEALYIEFINCINDIGIDLNLCLTNERYSSLLSFVCGLGPRKATALLKLLKKGN 884
Query: 691 GAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQE 750
+ RK VT G+G +FVN GF+++ S + ++LD TRIHPE+Y A++
Sbjct: 885 LRLRNRKSLVTECGMGPNLFVNCAGFIKI--PTNKVDDSDYAEILDTTRIHPEAYDWARK 942
Query: 751 LAKEVYNRDIEGDLNDDEDALEM----AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKR 803
+A + L+ DE A E+ + + D+PD LK LD +E KR+ NK
Sbjct: 943 MAIDA--------LDYDESAEEINQATVVHDIIDQPDKLKDLDLDAFAEELKRQGFGNKS 994
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV--------- 854
TLY IR EL H +++ R + S E FY++ ET ++L G+++ V
Sbjct: 995 VTLYDIREELTHRYKECRQPFDSLSPGEVFYLLVDETPESLCYGQLITCRVIGIVHRRPT 1054
Query: 855 ----RRVQGQR---------AIC-----------------------------VLESGLAG 872
RV +R +C +L+SG+ G
Sbjct: 1055 KDQIDRVNPERDPISNTWTCPLCLFDSFKELSEVWRHIDNNECKGIAIGVKVILDSGITG 1114
Query: 873 MLMKEDYSD-DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQN 931
+ ++ SD R E +++ G ++ C+I + ++ V L C+ S++ ++ Q +
Sbjct: 1115 FISTKNISDKQIRTPE--ERVKIGMVIHCRIIKLNIDKLSVDLSCKSSDLADHDNQFSKP 1172
Query: 932 LDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGES 991
D YY E E++ + +K+ + + +R+IVHP F N++ +A++ LS + G++
Sbjct: 1173 KDNYYDTEIEKADMEEDVKKTKKQ--QIPYIKRIIVHPSFHNISYKDAVEKLSHLDNGDA 1230
Query: 992 IIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDE 1051
+ RPS +G +LTLT KV D +Y H DI E GK + S +G +L+IG + +EDLDE
Sbjct: 1231 VFRPSRKGSDHLTLTWKVLDDIYQHVDIREEGK----VNSF-SLGHSLRIGNEEYEDLDE 1285
Query: 1052 VVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEF---PTRIVYGFGISHEHPG 1108
++ RY+ P+ + + ++++R + E EL ++ +E P+RI Y F S ++PG
Sbjct: 1286 ILARYVQPMAALTRDIINHRYYYVAGDTEKKELEKLLLSEKKKQPSRIPYHFSASSKYPG 1345
Query: 1109 TFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVA 1168
F+L+Y+ +P +EY+ + P+GF+FR R+ +D L+ +F+RH DP ++ SV+
Sbjct: 1346 KFMLSYLPRNHPCYEYVTVTPEGFRFRGRLHAKLDALLHWFKRHFRDPMPGTSRGT-SVS 1404
Query: 1169 AMVPMRS-PAN 1178
PM + P N
Sbjct: 1405 QDTPMNAVPPN 1415
>gi|17552892|ref|NP_497969.1| Protein EMB-5 [Caenorhabditis elegans]
gi|462008|sp|P34703.1|SPT6H_CAEEL RecName: Full=Suppressor of Ty 6 homolog; AltName: Full=Abnormal
embryogenesis protein 5
gi|285695|dbj|BAA03484.1| EMB-5 [Caenorhabditis elegans]
gi|3879352|emb|CAA84737.1| Protein EMB-5 [Caenorhabditis elegans]
Length = 1521
Score = 366 bits (940), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 311/1177 (26%), Positives = 533/1177 (45%), Gaps = 156/1177 (13%)
Query: 79 FIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKS 138
FI YRKE+ +LL +NN LW ++D D+KW L ++K+
Sbjct: 369 FIGFYRKEDIDNLLT------MNN-----------------LWRVYDFDEKWCHLSEKKN 405
Query: 139 ALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHF- 195
+ ++ Y+E S + + R + L D+ + AET ++ D+ F L +
Sbjct: 406 KIYDLMRRMREYQELSDDLTAKRRPISDADLMDT-----KYAETLEQLTDIHANFQLLYG 460
Query: 196 ---------PPGEV-GVDEGQYKRPK-----RSTKYSSCSKAGLWEVASKFGYSSEQLGL 240
G + G +E Q R K R+ KY C + G+ E+A +FG +++Q
Sbjct: 461 ALLDDMIRWEKGRLTGEEEEQEYRVKFKSSIRNDKYQMCVENGIGELAGRFGLTAKQFSE 520
Query: 241 QLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
L+ +K E +DP P E A + C F+ S VL GA+ M A EIS +P VR VR
Sbjct: 521 NLNWKKHDIE-QDPM-LPLEAAEEYVCPAFSDSDMVLNGAKFMLAKEISRQPQVRHSVRQ 578
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVT 360
F +A PT G ID H ++++ KP+R ++L KA+E+ L+ V
Sbjct: 579 EFRQSAHFWIKPTKKGRDTIDQTHPLYDKRYIKSKPVRSLTAEEFLFYHKAKEDGLVDVL 638
Query: 361 IKLP----EDSLNKLFSDCKEHYLSDGV------SKSAQLWNDQRELILKDALDNFLLPS 410
I +DS N L + YLSD + +++ + WN R+ + A+ L+P
Sbjct: 639 IMYESEEDQDSNNYLVN----KYLSDSIFQKDEYTENVEQWNSVRDECVNMAITEMLVPY 694
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY-----QRKDNDITPDEEAAPRVLACC 465
M E + + AK+ + + K +++S Y D+D D+ A R++A C
Sbjct: 695 MRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNNDDDDDGMDQHGARRIMAVC 754
Query: 466 WGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLK-FMMDHQPH 523
+ + E +F VM+D +G +VD L T R+ + +K + L K F+ +PH
Sbjct: 755 YPTERDEASFGVMVDENGAIVDYLRMVHFTKRTFGGGNNGLRKAESMDLFKKFVQRRKPH 814
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
+ L ++ CT LK D+ E + + ++ + + D ++Y S +S
Sbjct: 815 AIGLNIEDMECTRLKRDLEEAVADLFSQNLI-----YKPIPVFLMDNEAAKVYMRSNVSL 869
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQ 643
+ P +++A++L R L +P+ A L +I L PL+ + ++ ++
Sbjct: 870 AENPDHPPTLRQALSLARLLLDPIPEYAHLWNIDEDIFCLSLHPLQRDIDQEQLALVLSH 929
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTA 702
+V+ N+ G+DIN LQF GLGPRKA L +S+ I +R V
Sbjct: 930 ELVNKVNEEGVDINKCAEFPHYTNMLQFTCGLGPRKATDLLKSIKANDNLIESRSKLVVG 989
Query: 703 HGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEG 762
LG KVF+N GF+++ + + ++++LD +R+HPE+Y A+++A + D
Sbjct: 990 CKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDDSA 1049
Query: 763 DLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQD 819
D A++ + + PD L+ LD E R+ K+ TLY I EL ++D
Sbjct: 1050 DPT-------AALQEIMESPDRLRDLDLDAFADELSRQGFGEKKSTLYDISSELSARYKD 1102
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRVQGQRAICVL-------- 866
R ++EP+ E Y + + + EG V TV R+V A +L
Sbjct: 1103 LRQPFQEPT-GELLYDLLARSGKEIREGAKVLGTVQSVQYRKVDKDAADSMLPDVGEDGL 1161
Query: 867 -----------------------------------------ESGLAGMLMKEDYSDDWRD 885
++G+ G ++ S D
Sbjct: 1162 FTCPCCKSFTSSAPGGIQEHMLGDSRQGGCPGTPVGIRVRFDNGMTGFCPNKNISSSHVD 1221
Query: 886 SELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQS 945
+ L+ ++ K+ + K R+ +FL C+ S+++ + D Y+ E +
Sbjct: 1222 NPLT-RVKINQPYYFKVLKLDKERFSLFLSCKSSDLKED---DLSQRDQYWDEHQYQADL 1277
Query: 946 EQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTL 1005
E K+ +K+ +R+I HP F NV+ + A K+L + E IIRPS+ S L++
Sbjct: 1278 ELMKSESKKKTEANTRVKRVIAHPNFHNVSYEAATKMLDEMDWSECIIRPSANKDSGLSV 1337
Query: 1006 TLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLK 1065
T K+ D VY + + E KD + IG+ L +G + FEDLDE++ R++ P++
Sbjct: 1338 TWKICDRVYHNFFVKESAKDQ-----VFSIGRQLSVGGEDFEDLDELIARFVQPMIQISH 1392
Query: 1066 AMLSYRKFRKGSKAE----VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI--RSTN 1119
+ +++ F E V++ +R +K E R Y F S+ P F ++Y+ +
Sbjct: 1393 EITTHKYFFPNGTCEETEAVEQFVREKKREL-GRSPYVFSASYRQPCQFCISYMFDNTER 1451
Query: 1120 PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
HEY + P G +FR + F+ +DR++A+F+RH +P
Sbjct: 1452 IRHEYFKIVPHGVRFRHQNFDTLDRMMAWFKRHFHEP 1488
>gi|1669619|dbj|BAA13699.1| EMB-5 [Caenorhabditis briggsae]
Length = 1521
Score = 365 bits (936), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 306/1194 (25%), Positives = 535/1194 (44%), Gaps = 156/1194 (13%)
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
++PFI YRKE +LL +NN LW ++D D+K+ L
Sbjct: 366 FEVPFIGFYRKESIDNLLT------MNN-----------------LWIVYDYDEKYCHLS 402
Query: 135 KRKSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
++K L ++ Y+E S I + R L D + AET ++ D+ F
Sbjct: 403 EKKRRLYDLMRRMREYQELSDDITAKRRPINEMDLID-----INFAETLEQLTDIHANFQ 457
Query: 193 LHF----------------PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
L + GE ++K R+ KY C + G+ E+A +FG +++
Sbjct: 458 LLYGSLLEDMTKWEKERRAADGEETEYRAKFKSSIRNDKYQMCVENGIGELAGRFGLTAK 517
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
Q L K +++ P E A + C F + VL GA+ M EIS +P VR
Sbjct: 518 QFAENLDWRKH--DIDQDSAFPLEAAEEYICPAFIDRETVLNGAKFMLGKEISRQPLVRS 575
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
VR F DNA PT G ID H ++++ KP+R D ++L KA+++ L
Sbjct: 576 RVRQEFRDNAHFWVKPTKKGRDTIDETHPLFNKRYIKNKPIRNLTDEEFLYYHKAKQDGL 635
Query: 357 LQVTIKLPEDSLNKLFSDCKEHYLSDGV------SKSAQLWNDQRELILKDALDNFLLPS 410
+ + + D + +LSD + + + + WN + + A+ L+P
Sbjct: 636 IDMVLMYESDEDQAANQFLVKKFLSDSIFRKDEYTDNVEQWNAVGDQCVNMAITEMLVPY 695
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVG---PYQRKDNDITPDEEAAPRVLACCWG 467
M +E + + AK + + K ++++ P + K ++ + A R++A C+
Sbjct: 696 MKEEVYNTILEEAKMAVAKKCKKEFASRIARSGYVPEKEKLDEEDEEHSARRRMMAICYS 755
Query: 468 PGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLK-FMMDHQPHVV 525
P + E +F VM+D +G +VD L T R + + K + L K F+ +PH +
Sbjct: 756 PVRDEASFGVMVDENGAIVDYLRMVHFTKRGHGGGNTGALKEESMELFKKFVQRRRPHAI 815
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
L ++ CT LK D+ E + ++ + ++++ D L ++Y S IS +
Sbjct: 816 ALNIEDMECTRLKRDLEEAVAELYSQ-----SKIFSQINVYLMDNELAKVYMRSNISIAE 870
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
P +++AV+L R L +P+ A L +I L PL+ + + ++ +
Sbjct: 871 NPDHPPTLRQAVSLARQLLDPIPEYAHLWNSDEDIFCLSLHPLQRDIDQEILAQLLNHEL 930
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG 704
V+ N+ G+DIN LQF GLGPRKA SL +S+ I +R V
Sbjct: 931 VNRVNEEGVDINKCAEFPHYTNMLQFTCGLGPRKATSLLKSIKANDNLIESRSKLVVGCK 990
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDL 764
LG KVF+N GF+R+ + + ++++LD +R+HPE+Y A+++A + D D
Sbjct: 991 LGPKVFMNCAGFIRIDTRRVSDKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDDSADP 1050
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWR 821
A++ + + P+ L+ LD E R+ K+ TLY I EL ++D R
Sbjct: 1051 T-------AALQEIMETPERLRDLDLDAFADELNRQGFGEKKATLYDISSELSERYKDLR 1103
Query: 822 N----------------------------------QYKEPSQDEEFYMISGETED----- 842
QY++ +D MI TE+
Sbjct: 1104 APFVEPSGEALYDLLTRSGKEVKVGCKMLGTVQSVQYRKVERDTIDSMIPEHTEEDQYIC 1163
Query: 843 ------TLAEGRVVQATVRRVQGQRAICV---------LESGLAGMLMKEDYSDDWRDSE 887
T A+ + V+ + G+ CV L++G+ + S D+
Sbjct: 1164 PSCKIFTAADPQSVREHLLNA-GRPGGCVGSACGIRVRLDNGMTAFCPNKFISSSHVDNP 1222
Query: 888 LSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQ 947
L+ ++ K+ +I K ++ + L C+ S+++ + D ++ ++ Q +
Sbjct: 1223 LT-RVKLNQPYWFKVMAINKEKFSILLSCKSSDLKED---APAERDDFWDQQ----QYDD 1274
Query: 948 EKARKEKELAKKHFKE----RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYL 1003
+ A +KE KK + R+I HP F NV+ + A K+L + + IIRPS+ S L
Sbjct: 1275 DVAAMKKETTKKKDADTRVKRVIAHPNFHNVSYEAATKMLDEMDWSDCIIRPSANKESGL 1334
Query: 1004 TLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSH 1063
++T K+ D +Y + + E KD + IG+TL +G + FEDLDE++ R++ P++
Sbjct: 1335 SVTWKICDRIYHNFFVKESAKDQ-----VFSIGRTLSVGGEDFEDLDELIARFVLPMIQI 1389
Query: 1064 LKAMLSYRK-FRKGSKAEVD--ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI--RST 1118
+ +++ F +G+ + D E EK R Y F S+ P F ++Y+ S
Sbjct: 1390 SHEITTHKYFFTQGTSEDTDQVETFVHEKRRELGRSPYVFSASYRQPCQFCISYMFDNSN 1449
Query: 1119 NPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP 1172
HE+ + P+G +FR++ F+ +DR++A+F+RH ++P P IRS + P
Sbjct: 1450 RIRHEHFKISPRGIRFRQQNFDSLDRMMAWFKRHFNEP----PPGIRSSLSYRP 1499
>gi|392558553|gb|EIW51740.1| transcription elongation factor Spt6 [Trametes versicolor FP-101664
SS1]
Length = 1540
Score = 362 bits (930), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 323/1250 (25%), Positives = 558/1250 (44%), Gaps = 165/1250 (13%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS-ISKSLEAA 178
LW ++ + +K+ L +R++AL + Y R + FD + K ++ A
Sbjct: 387 LWRLYAVGQKYRSLLERRAALDALY--------------ARFGASDDYFDQEVRKRVDTA 432
Query: 179 ETEREV---------DDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
E + D KF++HF E + ++K P R + Y K+ + ++A
Sbjct: 433 EMAADAIEWLGMKYRDGQKSKFDVHFHDDEDQGETRKHKMPSRVSAYELAKKSIVSKIAE 492
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF---KCAMFNSSQAVLQGARHMAAV 286
FG ++ L + +E+ + P A ++ +L AR + A
Sbjct: 493 GFGIKPHEVVLNFISDHNTHFVEEQELNPLAFAEQHVDPDETRAQPAEELLTRARMIIAT 552
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRK-FEDAQW 345
E+ +P +R +R+ F NA+VS PT G S ID H + K+L K + Q+
Sbjct: 553 ELGKDPLLRHEMRNTFKANALVSVTPTERGISKIDQHHPYFNFKYLLNKSAADMLQSPQF 612
Query: 346 LLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN 405
L I AE E L+ V+I L D+ + + SD S +A+ WN++R ++++ L++
Sbjct: 613 LNILAAESEHLVTVSITLRPDAKANFERKLNDAFASDSFSDTARAWNEERSRVIQETLEH 672
Query: 406 FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY-----QRKDNDITPDEEAAPR 460
LLP+ VK R + + +L + ++L ++ V PY +R D P
Sbjct: 673 HLLPAGVKWTREWIREETEDYLAKQCAQSLRERIDVAPYASPAMKRGDT---------PS 723
Query: 461 VLACCWGPGKPE---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFM 517
V+A WG G P V +D +G LR D +Q+ + +
Sbjct: 724 VMAMSWGKGDPHKDSIAIVFIDEAGR-----------LREHTKLDNLVNTENQDEFMDML 772
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
+P V+ +G +++ T L I E+I + + E+ ++Y + + R+Y+
Sbjct: 773 KRRRPDVIAIGGFSIATTKLARRIKELI-----DSTKTSSDEVPTTPVIYVHDEVARIYQ 827
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
NS ++++ K + L RY+Q+PL A L G +I + L P EK
Sbjct: 828 NSPRAAEEFSALTPLGKYCIGLARYVQSPLNEYAAL---GSDITAITFEDEYQQLVPKEK 884
Query: 638 -YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFT 695
+E+V+VD N+ G+DIN A+ + L+FI GLGPRKA L + + G +
Sbjct: 885 LLSALERVLVDAVNKAGVDINRAVTDSYYQHLLRFICGLGPRKAQVLVKKIASMGGNLVN 944
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ-------FIDLLDDTRIHPESYGLA 748
R F+ L K+F+NA GFLR+ + + S D LD TRIHPE Y LA
Sbjct: 945 RDQFIKNGLLTTKIFLNAAGFLRIVQDSEPKPSKNRHGEEIDVPDPLDSTRIHPEDYELA 1004
Query: 749 QELAKEVYNRDIEGDLNDDEDALEMAI-----EHVRDRPDL-LKTYLLDRHIKEKKRENK 802
+++A + D E D++D+ + +A+ ++V+ DL L + ++ + E + K
Sbjct: 1005 RKMATDALELD-EEDIHDEHPSHVVAVIMQDDDNVKKLDDLNLDDFAVN--MFEANNDKK 1061
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
R TL +IR EL+ F + R + +PS E M++GE++ TL G +V V RV+
Sbjct: 1062 RHTLNVIRAELLDPFGERRPPFIQPSDWEVLTMLTGESKRTLHVGILVSVQVVRVKENFV 1121
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQ----KNRYQVFLVCRE 918
I L+SG+ GM+ + +D+ + + + +G L+ I ++ ++++ V L R+
Sbjct: 1122 IVRLDSGIEGMIARRYLTDE--GVQCAAIVKQGQTLSGVIIDVKLDLSQDQFTVELSSRD 1179
Query: 919 SEMR--NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTA 976
S++ +++++ ++ D + H + + ++ +ARK + + R+I HP F N +
Sbjct: 1180 SDVSAGDSQFRRVKHDDAWDHTQHD--RDKEMQARKAQAAVGR--TRRVIKHPNFHNFNS 1235
Query: 977 DEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIG 1036
+A + L ++ G+ +IR SS+G ++L +T KV D +Y H D++E D S G G
Sbjct: 1236 QQAEQYLEKQQRGDVVIRSSSKGGNHLAVTWKVDDKLYQHIDVVELNAD----PSGQGAG 1291
Query: 1037 KTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRI 1096
+ F DLDE++ ++ + ++ ++ + KF+ G++ ++ LR A P++
Sbjct: 1292 SKFVVDAHQFSDLDELIVNHVQAMARKVEELMVHEKFKPGTEDDLHLFLRNFVAANPSKS 1351
Query: 1097 VYGFGISHEHPGTFILTYIRSTN-----------PHHEYIGLYPK--------GFKFRKR 1137
YGF ++ + PG F L Y+ + N PH Y+ P FK R++
Sbjct: 1352 AYGFTLNRKKPGHFNLCYLANKNSTVQTWPVRVSPHAYYLFDTPAAGVPELCDAFKVRQK 1411
Query: 1138 MFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGG 1197
L P G P+ R+PA G ST S
Sbjct: 1412 SMSLGGGLGGAPGGKT--PYGGRTPA---------ARTPAPGHSTPGHMSA--------- 1451
Query: 1198 WNRDRSSTPGSRTGRNDYRNGGGRDGHPS-----GLPRP-YGGRGRGRGSNNSNRGNSSN 1251
R TP N Y GG HPS +P P YGG + G+
Sbjct: 1452 --RQVGRTP------NPY---GGASTHPSVAPPGSMPPPAYGGMSQYGGAQ-------YG 1493
Query: 1252 SERQDSSYDTPKWDSANKSGDDSWGNFPGAKAQNPAGREAFPGGWGSSGG 1301
+ + + TP + SG + P +P+ R A G G GG
Sbjct: 1494 APPPGAGFQTPSYQQPGPSG---FAQPPAPAGVHPS-RAAMIQGNGWQGG 1539
>gi|390597900|gb|EIN07299.1| transcription elongation factor Spt6 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1562
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 316/1208 (26%), Positives = 561/1208 (46%), Gaps = 118/1208 (9%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
+ H LS + + L L + ++P+I +R+ + ++ N D
Sbjct: 342 RHHHLLSDLIQAVTQTLKFLFMDLHEVPYIWTHRR------------DYISYFNPRDMRT 389
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQ-QLFD 169
+L LW + L +K+ L +R++A++S Y R E E R +N ++
Sbjct: 390 RVSLLSLDELWRVQSLGQKYCSLLERRAAMESLYH-RLEASDEYFEKEIRPRINSVEVVM 448
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
++ L E++ D+ F L F + D + K P R + Y ++ + ++A
Sbjct: 449 DTTEWLSMKYKEKKKDN----FELTFHDDDEKADAPKRKLPSRLSNYEVLKRSIVSKLAE 504
Query: 230 KFGYSSEQLGLQ-LSLEKMGDELEDPKETPEEMASNFK---CAMFNSSQAVLQGARHMAA 285
FG ++ L L +ED + P A F + ++ +L+ AR + A
Sbjct: 505 GFGLMPHEVVLNFLKPHDRPHLVEDQELNPTAFAEQFADPDPSKALPAEKLLERARMILA 564
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPL-RKFEDAQ 344
E+ +P +R+ +R +F+ +A +S PT G S ID H + K+L +KP+ +D Q
Sbjct: 565 TELGKDPLLREEIRQVFVTSAQISVLPTERGISKIDEHHPYFNFKYLYQKPVGDMLQDPQ 624
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
+L I AE E L+ V++ LP D +E + S G S SA WN +R +++D +D
Sbjct: 625 FLHILAAETEHLVTVSVSLPGDVKADFERRLREAFESSGYSDSATAWNAERFRVVQDVVD 684
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP--DEEAAPRVL 462
L+P+ VK R + + L L +++ V PY +TP + P VL
Sbjct: 685 KHLVPAGVKHVREWLREEIEDTLAAHCADVLRDRLDVAPY------VTPTTQHDETPSVL 738
Query: 463 ACCWGPGKP---ETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
A WG G P + T V LD +G + + T +L ++N Q K+ ER
Sbjct: 739 AISWGKGVPHRDDITAVFLDEAGRLRE--HTRFASLDTEN---QSEFKDLVER------- 786
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE-----EHPRDVGHEMDELSIVYGDESLPR 574
+P V+V+G +++ L + E++ ++ P D G + ++Y + + R
Sbjct: 787 RKPDVIVIGGFSMATARLSKTVKEVLRPDLDPDSTWSAPADRG---PPIPVIYVFDEVAR 843
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF--L 632
+Y++S+ + + K V L RY Q+PL A L GR++ + L + L
Sbjct: 844 IYQHSKRAEGEFGSLSSIAKYCVGLARYTQSPLNEYAAL---GRDLTAISLDEQMQYQHL 900
Query: 633 TPDEK-YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
P EK +E +VD+ N+VG+DIN A+ + L ++ GLGPRKA L + + G
Sbjct: 901 IPKEKLLTALEHALVDIVNKVGVDINRAVIDSYYQHLLPYVCGLGPRKAQVLVKKIAALG 960
Query: 692 A-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS-------SQFIDLLDDTRIHPE 743
+ R+ FV A L + VFVNAV FLR+ + S + D LD+TRIHPE
Sbjct: 961 GNVVNREQFVKAGLLTRNVFVNAVAFLRITADTDSKPSKNRHNEDADVADPLDNTRIHPE 1020
Query: 744 SYGLAQELAK---EVYNRDIEGDLNDDEDALEMA-IEHVRDRPDL-LKTYLLDRHIKEKK 798
Y LA+++A E+ DIEG+ +L M ++VR +L L + L + E
Sbjct: 1021 DYDLARKMAIDALELDEEDIEGEHASHTVSLIMQDPDNVRKLDELNLDDFALS--MFENN 1078
Query: 799 RENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
+ KR TL L++ EL+ F + R ++ P+ + M+SGET TL G +V V R++
Sbjct: 1079 EDRKRYTLDLVKAELVKPFGEKRGPFQLPTAWDVLTMLSGETRRTLHIGFIVSVLVTRIK 1138
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQ----KNRYQVFL 914
L+SG+ GM+ +Y D D + +G + + I+ + + V L
Sbjct: 1139 PTFVSVRLDSGVEGMI-NTNYLADQPGVVPDDVVKKGQTIPGVVIDIKMDLNHDSFFVEL 1197
Query: 915 VCRESEMR--NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQ 972
R ++++ +++++ ++ D + H++ +R +E + +K E+ + R+I HP F
Sbjct: 1198 SSRPADVQGGDSQFRRVKHDDCWNHDQH-ARDTEMQARKKRAEIGR---TRRIIKHPNFH 1253
Query: 973 NVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSL 1032
N A +A L ++ G+ +IRPSS+G ++ +T KV + ++ H D++E +
Sbjct: 1254 NFNATQAELHLENQQRGDVVIRPSSKGTDHIAVTWKVDEHLFQHIDVVELNAEQTG---- 1309
Query: 1033 VGIGKTLKI--GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKA 1090
G G I G+ F DLDE++ ++ + ++ ++++ KF+ G++ E+ LR A
Sbjct: 1310 -GAGSRFVIENGKYEFSDLDELIVNHVQAMARRVEELMAHEKFKAGAEEELHLFLRNFVA 1368
Query: 1091 EFPTRIVYGFGISHEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAY 1148
P++ YGF ++ + PG F L ++ + ++ + + P+ + + + L
Sbjct: 1369 ANPSKSAYGFTLNRKRPGHFNLCFLANKISSVQTWPVRVAPEAYYLYETAAPGVAELCDA 1428
Query: 1149 FQ-RHIDDPQ----------------------GDSAPSIRSVAAMVPMRSPANGGSTASA 1185
F+ RH + Q G + P RS + +P +G + A+
Sbjct: 1429 FKVRHAHESQNLGGAGTGGKTPYAARTPGRVPGHATPGHRSTRQVGRTPNPYSGATPAAP 1488
Query: 1186 GSGWGGST 1193
WG S
Sbjct: 1489 TPAWGTSA 1496
>gi|358346632|ref|XP_003637370.1| Transcription elongation factor SPT6 [Medicago truncatula]
gi|355503305|gb|AES84508.1| Transcription elongation factor SPT6 [Medicago truncatula]
Length = 547
Score = 359 bits (922), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 17 PTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLD 76
P D SI +ES+WI QL+S PLF + + G +++R+DI+RFL+L H++K D
Sbjct: 199 PVDRMSIEEESSWILRQLVSNINPLFSEAKSC----GLVDTVNREDIVRFLELHHIKKYD 254
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIAMYRKE+C SLLKD +Q+++ N + +D E P L WHK+LW I +LD KWL LQKR
Sbjct: 255 IPFIAMYRKEQCHSLLKDGKQDDLENTSMNDGEGNPKLNWHKILWIIKELDIKWLHLQKR 314
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+ LQ YY K +E+E + + + ++Q+FDSI+ LE AETERE+DDVD+KFNL+FP
Sbjct: 315 KNMLQRYYNKHFEDECQMSFLAEESSFHKQIFDSITIMLEKAETEREIDDVDMKFNLYFP 374
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSL-EKMGDELEDPK 255
P + + G YKRP T YS C KAGL +A K G + E+ G ++L E EDP+
Sbjct: 375 PADEFLSSG-YKRPLMKTYYSDCRKAGLSSLARKIG-NPEKFGSLVTLNEAEMVSEEDPE 432
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
E+PEEMAS + C F + +AVL+GARHMA++ +SCE RKYVRSIFMD A+VST PT
Sbjct: 433 ESPEEMASIYTCETFQTLEAVLKGARHMASLMLSCEIPFRKYVRSIFMDKALVSTRPTLK 492
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL 368
G++AIDSFH+FAG KWL++KPL KFED+QWLLIQKAEEE+LL+V IKLPED++
Sbjct: 493 GNTAIDSFHEFAGFKWLKDKPLLKFEDSQWLLIQKAEEEELLKVEIKLPEDAV 545
>gi|302693016|ref|XP_003036187.1| hypothetical protein SCHCODRAFT_256245 [Schizophyllum commune H4-8]
gi|300109883|gb|EFJ01285.1| hypothetical protein SCHCODRAFT_256245 [Schizophyllum commune H4-8]
Length = 1586
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 311/1142 (27%), Positives = 544/1142 (47%), Gaps = 117/1142 (10%)
Query: 120 LWAIHDLDKKW-LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLE-- 176
LW I+ L +K+ LL++++S SY + + E++ Y +T + + +SI+ + E
Sbjct: 413 LWRIYTLGQKFRALLERKRSLTASYARLKVEDD----YYDTEIFPKLESVESIADATEWL 468
Query: 177 AAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
+ + + D D F H E ++ ++KRP R + Y + VA FG ++
Sbjct: 469 MMKYKDKKQDAD-TFRFH-DDNEEQIEAKKHKRPSRISAYEVAKNSIASRVAHGFGLTAS 526
Query: 237 QL--GLQLSLEKMGDE---LEDPKETPEEMASNF---KCAMFNSSQAVLQGARHMAAVEI 288
Q+ +K G +E+ ++TP A S + +L AR + + E+
Sbjct: 527 QIVENFHAVSKKDGKPVHFIEEFEQTPLAYAEQHIDPDPTKAKSPEELLAQARLILSTEL 586
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA-QWLL 347
+P +R+ +R +F +AV S PT G + ID H F K+L +KP+ +F D Q+L
Sbjct: 587 GKDPNLRQAIRDVFKSSAVFSVSPTERGITKIDVTHPFYAFKYLLDKPITEFLDTPQFLQ 646
Query: 348 IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
I AE E L+ V+I L + + + SD +S++LWN +R + DA++ L
Sbjct: 647 ILAAESEHLVTVSISLSPLAQQQFEDLLNDACTSDAFGESSKLWNAERRQAVHDAVEQHL 706
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
+P+ K R + + + + G AL+ ++ V P++ + + TP A P VLA WG
Sbjct: 707 IPAGRKWVRDYLREEIEDAMANKCGTALYERIHVAPWKSQTDTDTP-LGAVPAVLAVSWG 765
Query: 468 PG---KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHV 524
G + V +DS G + D +T +Q RD+ + + P V
Sbjct: 766 KGDVQRDPIHAVFVDSEGRMRD--YTQLENFHTQQPRDE---------FVDLIRRRNPDV 814
Query: 525 VVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSD 584
+V+G +++ T L I EI+ E+ G + +VY + + R+Y++SR +++
Sbjct: 815 IVIGGFSMATTKLSQRIKEIL----GEYSNQGG--LAPKPVVYVPDDVARIYQHSRRAAE 868
Query: 585 QLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL-------CPLENFLTPDEK 637
+ + V L RY Q PL A L G ++ + L P E LT
Sbjct: 869 EFTTLPTIARYCVGLARYTQGPLNEFAAL---GSDVTAITLDEDLQQWVPKEKLLT---- 921
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTR 696
E+ +VDVTN+VG+DIN A+ + L F+ GLGPRKA +L + + G++ R
Sbjct: 922 --AFERRLVDVTNKVGVDINRAVTDPYYQHLLPFVCGLGPRKAQALVKKISAMGGSLTNR 979
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS----QFIDL--------LDDTRIHPES 744
+ F+ L ++F+NA GFLR+ + +S+S Q +D+ LD+TRIHPE
Sbjct: 980 EQFIKKGLLTTRIFLNAAGFLRINVNDMTSSASKKRAQMMDVDEELASDPLDNTRIHPED 1039
Query: 745 YGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPD----LLKTYLLDRHIK--EKK 798
Y LA+++A + D E DL+D + +++ + PD L L+D I E
Sbjct: 1040 YELARKMAADALEYD-EEDLHDVHPSHVVSV--LMKEPDRQNKLNDLNLVDFAISLLEAN 1096
Query: 799 RENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
E KR TL +IR EL++ F ++R+ + + M+SGET TL G +V A V R+Q
Sbjct: 1097 NEPKRHTLGMIRSELVNPFCEYRDPFPLLEAWDVLTMLSGETYKTLRRGLIVSAAVMRIQ 1156
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS----IQKNRYQVFL 914
+A L+SG+ + +E +D R + L +G I++ + I + + L
Sbjct: 1157 PGKATLRLDSGVEAYVTEEYAAD--RPGRIDAALQKGQIVSAVVIEHKFDIANDSLMLEL 1214
Query: 915 VCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNV 974
R ++ Q + + P H + +R+ + + + ++ A++ R++ HP F N
Sbjct: 1215 STRPMDLAPGDEQ-FRKVKPDMHWD-DNREDKDKDIVERRKRAEERKTRRVVKHPDFHNF 1272
Query: 975 TADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG 1034
+ +A + L + G+ +IRPSS+G ++L +T KV DG+Y H +++E D + G
Sbjct: 1273 NSKQAEEYLENQNRGDVVIRPSSKGTNHLAVTWKVDDGLYQHINVMEPNAD----AAGTG 1328
Query: 1035 IGKTLKIG-EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFP 1093
+ L + + DLDE++ ++ + + ++++ +F+KG + E+ L+ + A P
Sbjct: 1329 VSNQLIVDPTHVYSDLDELIVNHVQAMARRVDDLMAHERFKKGPEDELHLYLKQQLAANP 1388
Query: 1094 TRIVYGFGISHEHPGTFILTYIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ- 1150
R +YGF ++ + PG F L ++ S + + + P+ + + L F+
Sbjct: 1389 KRSMYGFTLNRKKPGHFNLCFLASKGSTVQSWPVRVAPEAYYLFDAAAVGVSELCDAFKV 1448
Query: 1151 RHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRT 1210
RH+ + Q + ANGG T G+ GG T G +TPG T
Sbjct: 1449 RHLHESQ-----------------NLANGGKTPYPGA--GGRTPARG-----HATPGHMT 1484
Query: 1211 GR 1212
R
Sbjct: 1485 SR 1486
>gi|328850483|gb|EGF99647.1| hypothetical protein MELLADRAFT_50652 [Melampsora larici-populina
98AG31]
Length = 1598
Score = 359 bits (921), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 322/1244 (25%), Positives = 563/1244 (45%), Gaps = 108/1244 (8%)
Query: 16 PPTDGESIVDESTWIYNQLLSGTLPLFGQ--RGAGSPKEGHDLSISRDDIMRFLDLLHLQ 73
P E + + W+ ++ LF Q R P +S D++ F +
Sbjct: 316 PLLTSEELDRAAEWVSQRISERCNTLFLQKDRHGFFPILKEPFIVSIKDVLEFF---LAK 372
Query: 74 KLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLL 133
L++PF+ M R++ D + NE N E LW +H L K++ L
Sbjct: 373 YLEVPFVFMNRQDYITHHTSDNQGNETNVQYLSRDE----------LWKVHTLSLKYVAL 422
Query: 134 QKRKSALQSYYKK------RYEEESRRIYDETRLA-LNQQLFDSISKSLEAAETEREVDD 186
RK L+ + K +EE RI ++ L Q L L A+ + D
Sbjct: 423 LDRKKGLRRLFDKLDAEDDYFEECYGRIQSVEEVSDLMQWLTLKYGSRLREAQADVREDA 482
Query: 187 VDLKFNLHFPPGEVGVDEG----QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQL 242
L ++ P G + +YK+ R ++Y + + ++AS G SS L
Sbjct: 483 DALAADI-IPDGMRNANASDKPVRYKKASRESRYERAKGSVVSKLASDLGISSRDLSADF 541
Query: 243 SLEKMGDELEDPKETPEEMASNFKC--AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+DP P A F FN S+ L+ A+ + + +I +P ++K+VR
Sbjct: 542 LARNRQHFPDDPPLPPAVYAEEFAQPETEFNDSRKALEAAKLIVSTDIGRDPMLKKHVRQ 601
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF-EDAQWLLIQKAEEEKLLQV 359
+F + VV+ PT G S I H + K+L +KP + +Q+L I AE+E L+ V
Sbjct: 602 LFRQHGVVTVTPTDGGMSKITELHPYYAFKYLGQKPFSGLKQSSQYLQIMAAEQELLVNV 661
Query: 360 TIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLM 419
+ L ++ N ++ Y SD S+ A WN+ RE IL A+++ LLP + A++ +
Sbjct: 662 QVHLNPETDNTFKTEMMNTYKSDFTSELATSWNELREEILLHAIEHMLLPDAARWAKNYL 721
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKP--ETTFVM 477
A+ ++ + L ++ V PY+ D+ P V+A G G P ++TFV+
Sbjct: 722 KDEAEEYVAQRCAEELEERIDVAPYRPAH---FLDDGEVPSVVAISNGAGDPRRDSTFVI 778
Query: 478 -LDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTS 536
LD +G D ++ N+RD +++ L F+ P V+V+G + S
Sbjct: 779 YLDDAGRFRD-------HMKLDNLRDPTPRQD----LSDFLQKRTPDVIVVGGFSASTNR 827
Query: 537 LKDDIYEIIFKMVEEHPRDV---GHEMDE------LSIVYGDESLPRLYENSRISSDQLP 587
L +D+ + ++ E+ ++ G DE ++ + RL + +++ D
Sbjct: 828 LLNDVKAVAHELSEKMKNELQSSGEMNDEALSRMGFPVIVARDDTARLCQQTKLGEDDFG 887
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
G + +AL RY+Q+PL A G++I + P + FL D +E+ +V+
Sbjct: 888 GLPAIGRYCIALARYVQSPLNEYA---AAGQDITAISFHPDQQFLPKDLLQVYLERALVN 944
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL---VRAGAIFTRKDFVTAHG 704
+ N VG+DIN A++ + LQ++ GLGPRKA L + + G + +R + +T
Sbjct: 945 IVNSVGVDINRAVNDHYYQHLLQYVCGLGPRKAQKLIKMINAKSSEGTLISRNELITEEL 1004
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDL 764
+ K +F N GFLR+++ + D+LDDTRIHPE Y +A+++A +
Sbjct: 1005 VTKNIFYNCAGFLRIKQGDLTTARETEPDILDDTRIHPEDYYVARKMAADAQEL------ 1058
Query: 765 NDDEDALEMAIEHVRDRPDLL-------KTYLLDRHIKEKKRE-------NKRETLYLIR 810
D+ED E V DLL L D ++ + E KR TLY IR
Sbjct: 1059 -DEEDLAEQPPSQVVS--DLLAADSGNGAAKLDDLNLDDFAVELLRLLNVRKRLTLYQIR 1115
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGL 870
EL + + R+ + + ++ F + +GE E TL+ G V+ + + + + L+SG+
Sbjct: 1116 TELQKPYAEKRSTFDALTPEQMFDLWTGENEATLSRGSVIPVKITKSRDRGLTVRLDSGI 1175
Query: 871 AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQ 930
G +++ Y + ++S K G + + I K+R+ V L + + + Q +
Sbjct: 1176 EG-FIEQRYMVEEGTPDMS-KFPVGSTIQALVMEIHKDRFMVELNSQPTAVAAAAGQQ-K 1232
Query: 931 NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGE 990
+ H + Q ++++ K++ + +R+I HP F N + +A + L+ ++ G+
Sbjct: 1233 KVKTDDHFDEIQMQMDKDRLESRKKIGSRR-TQRVIKHPNFHNFNSGQAEQHLANQQRGD 1291
Query: 991 SIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDL 1049
+IRPSS+G +L +T KV GVY H D++E K ++ +G+TLKI G ++ DL
Sbjct: 1292 CVIRPSSKGTDHLAVTWKVDTGVYQHIDVLELDKQNE-----FSLGRTLKIGGRYSYSDL 1346
Query: 1050 DEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
DE++ ++ + ++ M+++ ++ K + E+ + L P R VY F I + PG
Sbjct: 1347 DELIVSHVRAMARKVEEMIAHERY-KSTPEEMSKYLNTYLMANPDRSVYAFCIDKDTPGC 1405
Query: 1110 FILTYIRSTN-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD----PQGDSAPS 1163
F L + N P ++ + + P ++ D+ L F+ P G
Sbjct: 1406 FFLGFKADKNTPMQKWTVKVSPGAYELNGTQAGDMLSLCNAFKTQYTARSALPAGQGRVD 1465
Query: 1164 IRS-VAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTP 1206
+ M+ R+P NGG T GG T G NR +TP
Sbjct: 1466 VYGRQTPMLNGRTPINGGRTPLI----GGRTPMLG-NRTPLATP 1504
>gi|393245419|gb|EJD52929.1| hypothetical protein AURDEDRAFT_110772 [Auricularia delicata
TFB-10046 SS5]
Length = 1501
Score = 358 bits (920), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 322/1279 (25%), Positives = 582/1279 (45%), Gaps = 166/1279 (12%)
Query: 23 IVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
I D + W+ +L + F Q G + L ++ + L+++ Q L++P+I
Sbjct: 278 IGDAAHWVSQRLGDQIISDFFQPGGARYRYNTQLVLA---VQAALNMILCQTLEVPYIWY 334
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
+R++ L R L LW ++ L +K+ L RK L+S
Sbjct: 335 HRRDSLCHFEAPL--------------RIELLSLQD-LWHVYVLAQKYRALVDRKRGLES 379
Query: 143 YYKK------RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
Y++ YE E R TRL +L ++ L +R+ D +F L F
Sbjct: 380 LYERLAVSDGYYEGEIR-----TRLD-GVELVADTTEWLSLKYRDRKKD----QFTLEFH 429
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+ V E ++K P R++ Y K + ++A +G S++ + L ++D +
Sbjct: 430 DDDAPV-EKKHKAPSRASAYEIVKKTIVAKLAEGYGLSAQNVVLNFLASTRQHFVDDQEV 488
Query: 257 TPEEMASNF-KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
P E A F A + L AR + A E+ +P +R+ R++F AV+S PT
Sbjct: 489 PPLEYAEQFIDPAAPADPKDQLAKARMILATELGKDPLLRQEARTLFKSFAVLSVIPTEK 548
Query: 316 GDSAIDSFHQFAGVKWLREKPLRK-FEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
G + I+ FH + K+L++KP+ + +Q L I +AE + L+ V I L + +
Sbjct: 549 GIAKINEFHPYYAFKYLKDKPISMMLQSSQLLHILRAEADHLVTVDIHLTQAAHMDFGQR 608
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
E + SD S + + WND+REL++++ ++ FL+P K + + ++
Sbjct: 609 LLEAFTSDSYSDTVKAWNDERELVIREVMEKFLIPLGAKWVKEWAREEVEDFIAKGCAVE 668
Query: 435 LWNKVSV-GPYQRKDN-------DITPDEEAAPRVLACCWGPGKPE---TTFVMLDSSGE 483
L +++V G QRK+ PD ++ P +LA WG G P+ T V LD +G
Sbjct: 669 LEGRINVVGFNQRKEGLPVNAPPQSLPDPDSFPSILAMSWGKGDPQKDPITMVFLDQNGR 728
Query: 484 VVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYE 543
LR D + LL+ + +P +V+ ++ L + + E
Sbjct: 729 -----------LREYTTIDNLFDPEPRRELLELIKRRRPQGIVIAGFSIHTMKLHEKVKE 777
Query: 544 IIFKMVEEHPRDVGHE-----------------------------MDELSIVYGDESLPR 574
++ K +P + G + + +VY + + R
Sbjct: 778 MLEKESGVNPPEGGDSYGGGGGAGGSGWDGDEGRDRDRDRSEDAWLARIPVVYVKDEVAR 837
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
LY++S ++D+ K V L R+ Q+PL A L G ++ + L P
Sbjct: 838 LYQHSARATDEFSDLSTMAKYCVGLARFAQSPLIEYAAL---GSDLPAITFDADAQTLVP 894
Query: 635 DEKYGM-IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVR-AGA 692
EK + +E+ +V+V N VG+DIN A++ + + L F++GLGPRKA L++ ++ G
Sbjct: 895 REKLLVALERALVNVVNYVGVDINQAVNDPYYYHLLPFVAGLGPRKAQHLKKKILTIGGT 954
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRV----------RRSGQAASSSQFIDLLDDTRIHP 742
+ R+ F+ + K++F+N GFLR+ + + S D LD TRIHP
Sbjct: 955 MINREQFIKV--MTKQIFMNTAGFLRIPQEDDYDARDSKRSKHDDVSDAPDPLDQTRIHP 1012
Query: 743 ESYGLAQELAKEVYNRDIEGDLNDDEDALEMA-IEHVRDRPDLLKTYLLDR---HIKEKK 798
E Y LA+++A + + D E D+ DD ++ + I + RD+ L LD +++
Sbjct: 1013 EDYELARKMATDALDMD-EEDVKDDHPSMVITQILNHRDKEKKLNELNLDDFAVNLQMTN 1071
Query: 799 RENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
++ KR+TL I+ EL+H F D R +++ PS E M++GET+ +L G +V V R++
Sbjct: 1072 QDFKRQTLDNIKSELLHPFADGRREFRLPSHWEVVTMLTGETQKSLRVGLIVSVVVTRIK 1131
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNR-YQVFLVCR 917
L SG+ G++ ++ + ++ + +G + I ++ +R V L
Sbjct: 1132 DSFVHVRLASGVDGIINQQYLA------ATANAVSKGMTIPAVIIHVKDDRNIAVELSSH 1185
Query: 918 ESEMR--NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVT 975
+ ++ ++ + +Y R++R E + RK E + R+I HP F N
Sbjct: 1186 PDHVARGDSDFRRVAPEEEFYDHARAARDKEMLQRRKRHETGQA---RRVIKHPNFHNFN 1242
Query: 976 ADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIE---GGKDHKDIKSL 1032
+A + L+ +E G+ ++RPSS+G ++L +T KV G+Y H D++E GG D+
Sbjct: 1243 MLQAEQYLANRERGDVVVRPSSKGQNHLAVTWKVDTGLYQHIDVVEEQTGGTG--DVTGR 1300
Query: 1033 VGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEF 1092
+ + T + + D+DE++ ++ + ++ ++++ KF+ G++ +++ LR +
Sbjct: 1301 LLVDNTYQ-----YSDIDELIVNHVKAMARRVEELMAHEKFKAGTQEDLEHYLREFVKAY 1355
Query: 1093 PTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRH 1152
PT+ +Y F ++ + PG F ++++ + + + R++ F +
Sbjct: 1356 PTKSIYAFSLNRQRPGHFNISFLANKDSQITTWAV----------------RVLPQFYQL 1399
Query: 1153 IDDPQGDSAPSIRSVAAMVPMR-----SPANGGSTASAGSGWGGSTNEGGWNRDRSSTPG 1207
D +APS+ + MR S A G G+G G T GG TPG
Sbjct: 1400 FD----ATAPSVAQLTDAFKMRHLHETSKAAHGGKTPYGAGL-GMTPAGG------RTPG 1448
Query: 1208 SRT-GRNDYRNGGGRDGHP 1225
S T GR R G GR +P
Sbjct: 1449 SATPGRMSVR-GVGRTPNP 1466
>gi|170087320|ref|XP_001874883.1| transcription elongation factor SPT6 [Laccaria bicolor S238N-H82]
gi|164650083|gb|EDR14324.1| transcription elongation factor SPT6 [Laccaria bicolor S238N-H82]
Length = 1406
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 288/1040 (27%), Positives = 486/1040 (46%), Gaps = 87/1040 (8%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKK------RYEEESRRIYDETRLALNQQLFDSIS- 172
LW IH L +K+ L +R+ AL + Y++ YEEE + D + + + ++
Sbjct: 371 LWRIHSLGQKYRSLVERRRALSASYERLQVKDDYYEEEIQPQIDGVEVVTDATEWLAMKY 430
Query: 173 --KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
K L +A V+ +F+ P + K P R + Y ++ + ++A
Sbjct: 431 KDKKLSSA--------VEFRFHDDDEPDTTK----KRKMPSRISAYEVVKRSIVSKLAQG 478
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQA---VLQGARHMAAVE 287
FG + L +ED + P A F + +QA +L AR + + E
Sbjct: 479 FGIEPHHVVLNFMASHHVHFVEDQELNPIVFAEQFADPDPSKAQAPEDILVRARMILSTE 538
Query: 288 ISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED-AQWL 346
I +P +R +R IF + A +S PT G + ID H + K+L K ++ +D AQ+L
Sbjct: 539 IGKDPLLRSQIRKIFKEEAQISVEPTERGITKIDDNHPYYNFKYLHRKSIKDMQDSAQFL 598
Query: 347 LIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
LI AE E L+ V+I +P +++ E + SD S SA+ WN +R ++++ ++
Sbjct: 599 LILAAEAEHLVNVSISIPNAAISSFERRLNEAFASDNFSDSAKSWNVERSRVVQEVMELH 658
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
L+P+ +K R + + +L + L +V V PY ++ D E A VLA W
Sbjct: 659 LIPAGIKWTREYLREEVEDYLAAQCSNRLRARVDVAPYLVRE---LKDGEIACSVLAISW 715
Query: 467 GPGKPE---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
G G P T V +D +G + + +T L + D+ L F+ +P
Sbjct: 716 GKGDPHKDAITLVFMDEAGRMRE--YTKIDNLHDTEMIDE---------FLDFVKRRKPD 764
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR------DVGHEMDELSIVYGDESLPRLYE 577
+VV+G ++S L + + ++ ++ ++Y + + R+Y+
Sbjct: 765 LVVMGGFSMSTMKLTRLVKTTLHGTGPSQGETGWGNPSANEQVFDIPVIYVFDDVARIYQ 824
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
+SR ++D+ K V L RY Q+PL A L G +I + L + L P EK
Sbjct: 825 HSRRAADEFGALSPTAKYCVGLARYTQSPLNEFAAL---GSDITAITLSEDDQHLVPKEK 881
Query: 638 -YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFT 695
E+V+VDVTN+ G+DIN A+ + L F+ GLGPRKA L + + G +
Sbjct: 882 LLSAFERVLVDVTNKTGVDINRAVADAYYQNLLPFVCGLGPRKAQVLIKKIGSLGGNLVN 941
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRV-----------RRSGQAASSSQFIDLLDDTRIHPES 744
R F+ L K+F+NA GFLR+ R G+ A D LDDTRIHPE
Sbjct: 942 RDQFIEGGLLTTKIFLNAAGFLRIAQEHDPKPTKHRHDGETAP-----DPLDDTRIHPED 996
Query: 745 YGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPD---LLKTYLLDRH---IKEKK 798
Y LA+++A + D E D++D+ + + + PD L LD + E
Sbjct: 997 YELARKMATDALELD-EEDIHDEHPS--HVVNLIMTDPDNERKLSELNLDEFAISLYEAN 1053
Query: 799 RENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
+ KR TL +IR EL+ F + RN++ PS E M+SGET TL G +V V+R+
Sbjct: 1054 HDQKRHTLNVIRDELLRPFAEQRNKFVLPSDWEILTMLSGETPRTLEVGLIVTTQVQRLT 1113
Query: 859 GQRAICVLESGLAGMLMKEDYSD--DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVC 916
L+SG+ G++ + SD D D+ + ++ + ++++ + V L
Sbjct: 1114 KSFINVRLDSGIEGVIATQYLSDSGDLPDNLVKKGQTIPGVIVERKFDMEQDSFFVELSS 1173
Query: 917 RESEMRNNRYQHCQ-NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVT 975
R+ E+ Q+ + +DP + R + + +K E + R++ HP F N
Sbjct: 1174 RQEELSKGDEQYRRVKIDPMWDGVRCEKDKDMLARKKRAETDRTR---RVVKHPNFHNFN 1230
Query: 976 ADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGI 1035
+A L ++ G+ +IRPSS+G +L +T KV D +Y H D E D
Sbjct: 1231 TAQAEAYLEKQQRGDVVIRPSSKGIDHLAVTWKVDDKLYQHIDATELNADP---TGQTVA 1287
Query: 1036 GKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTR 1095
G+ + T+ DLDE++ +I + ++ ++++ KF+ GS+ E+ L+ A P +
Sbjct: 1288 GQLVVDSNHTYADLDELIVNHIQAMARRVEELMAHEKFKHGSEDELHLFLKNFLAANPAK 1347
Query: 1096 IVYGFGISHEHPGTFILTYI 1115
+YGF ++ + PG F L ++
Sbjct: 1348 SMYGFTLNRKRPGHFNLCFL 1367
>gi|388852500|emb|CCF53902.1| related to transcriptional regulator protein SPT6 [Ustilago hordei]
Length = 1711
Score = 356 bits (914), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 305/1070 (28%), Positives = 514/1070 (48%), Gaps = 92/1070 (8%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
+K+P +Y L E+A KFG SS++L +S +DP+E+P + A F
Sbjct: 557 FKKPSLVGQYERTKNTVLSELAKKFGISSDELAANISSPARQYSPKDPEESPFKFAEQFA 616
Query: 267 CAMF--NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFH 324
A + S + L A+ M + EI +P +++ +R +F D A ++ PT G + ID H
Sbjct: 617 GAAWGAQSPEIALAKAKLMLSQEIGKDPILKRELRQLFKDAAEINIEPTERGMTVIDDQH 676
Query: 325 QFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSD 382
+A K++ KP R + AQ+L + +AE+E L+++ I L + L++ + +Y S+
Sbjct: 677 PYANFKFILNKPARLLPQQPAQYLQMLQAEDELLIKLDIGLKDVVLSRFENRLHSNYASE 736
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
GVS+ ++ WNDQR ++K+AL + L+P+ + + ++ LL + + G
Sbjct: 737 GVSEVSKAWNDQRREVIKEALKSHLVPNARLWLKEWLREESREMLLRHCDVLMTKRAQDG 796
Query: 443 PYQ------RKDNDITPDEEAAPRVLACCWGPGKPETTFVM---LDSSGEVVDVLFTGCL 493
P+ R + +E+ PRVLA G G P V LD G + +
Sbjct: 797 PFMSRSMMARNRDPKIEEEDRIPRVLAVSHGGGDPRKDVVQAVYLDERGRLRE--HATFD 854
Query: 494 TLRSQNVRDQQSKKNDQER-------------LLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
LR +R Q ++ + ER +K + +P VVV+ ++ LK
Sbjct: 855 DLRPLGLRQIQERELEMERTRGKAEFVDHRADFVKLLKQRKPDVVVVSGWSVRTAELKRH 914
Query: 541 IYEII----FKMVEEHPRDVGHEMDE--LSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
+ E++ ++ +E D E D+ + +V + + R+Y++S ++++ P + +
Sbjct: 915 VRELVDMAHQEICDEDQLDSDLERDQALIDVVTCHDDVARIYQHSSRAAEEFPELQELGR 974
Query: 595 RAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM-IEQVMVDVTNQVG 653
+AL RY Q+P+ A L G ++ + L P + L P E+ + E+ + V N +G
Sbjct: 975 YCLALARYAQSPVNEFAAL---GNDLTAVILDPNQRLL-PQERLRLHFERCIGAVVNDIG 1030
Query: 654 LDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA--GAIFTRKDFVTAHGLGKKVFV 711
++IN A+ + L FI+GLGPRKA +L ++ G + R +T + L +VF
Sbjct: 1031 VEINQAMSSPYTQTMLPFIAGLGPRKAHALVNAISTKLEGTLINRTLLITRNILTFQVFQ 1090
Query: 712 NAVGFLRVRRSGQ-AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA 770
N FLR+ + A D+LD TRIHPE Y +++A + N+ E DL + +
Sbjct: 1091 NCASFLRIEQDMLLEADEDDVPDVLDSTRIHPEDYDFPRKMAADALNKH-EEDLEGEHPS 1149
Query: 771 LEMA-IEHVRDRPDLLKTYLLDRHIK---EKKRENKRETLYLIRRELIHGFQDWRNQYKE 826
L + D D L T LD + + E+K E KR TL+ R ELI + D R + +E
Sbjct: 1150 LPCKELMEDPDPEDKLNTLDLDNYAQMLYERKGERKRATLHSCRAELIKPYDDLREKQRE 1209
Query: 827 PSQDEEFYMISGETEDTLAEGRVVQATVRRVQ-GQR-----AICVLESGLAGMLMKEDYS 880
PS +E M +GET TLAEG VV V RVQ G R L+SG+ G + E +
Sbjct: 1210 PSPEEILTMFTGETPKTLAEGFVVSVEVLRVQEGNRQQEGHVRARLDSGIEGTIEAEFTT 1269
Query: 881 DDWR--DSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP---- 934
D++ L D + L I+ I V L R +++ +R H Q P
Sbjct: 1270 DNYAPGSVRLRDLIRPQQTLDALIRQIDPETCSVKLSIRPWDLQ-HRASH-QGKTPVDGK 1327
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+Y +++S+ +EQ A K K + + R+I HP + N +A+ L + G ++R
Sbjct: 1328 FYDHQKASKWNEQASA-KAKARVQARRQNRVIDHPNYHNFNYKQAVVFLRNQPRGSVVVR 1386
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVV 1053
PSS+G +L +T KV D VY + D++E K+ S +G+ L+I G ++ DLDE++
Sbjct: 1387 PSSKGDDHLAVTWKVDDDVYQNIDVMELDKE-----SEYSLGRVLRIEGMGSYSDLDELI 1441
Query: 1054 DRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILT 1113
++ P+V ++ M+++ K++ + ++ L P+R VY FG++ + PG F L+
Sbjct: 1442 VNHVKPMVHMVEMMMNHEKYKGADEEDLHRYLTNWSLANPSRSVYAFGLNKDRPGYFNLS 1501
Query: 1114 YIRSTNPHHEY--IGLYPKGFKF-RKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAM 1170
+ + + + + + P FK D+ L F+ Q + S+ A
Sbjct: 1502 FKANRDAAIQTWPVKVLPNAFKLGPADQLADVAALCNAFKT-----QYTTQASMARGA-- 1554
Query: 1171 VPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGG 1220
++P GG T + G GG+T GG TP G RNGG
Sbjct: 1555 ---KTPYGGGRTPA--PGMGGATPLGG------RTP---YGAGGIRNGGA 1590
>gi|307106429|gb|EFN54675.1| hypothetical protein CHLNCDRAFT_58171 [Chlorella variabilis]
Length = 1606
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 246/755 (32%), Positives = 398/755 (52%), Gaps = 93/755 (12%)
Query: 60 RDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDF-------ERTP 112
R I L ++ + +IPF+A YRKE+C LL +E + D P
Sbjct: 452 RQAIQAVLLQVYEKHEEIPFVAQYRKEKCGELLVVRSSDEPKTTSEQDAGGGYPAGTMKP 511
Query: 113 T---LKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFD 169
+ ++ ++V++A+ L ++W +Q R+ A + Y+K E R DE + A+ + L
Sbjct: 512 SHRRIRRYEVMYAVQQLAQRWRAMQVRREARRRAYEKALGETMR---DEEQAAIQECL-- 566
Query: 170 SISKSLEAAETEREVDDVDLKFNL---HF----------------PPGEVGVDEGQY--K 208
+LE A+T E+ D + KF + F P ++ + G +
Sbjct: 567 ---AALERAQTMEELGDCEAKFRMVQQQFSDASDQQAAAAAAAEEPLSQLSLGNGAAGPR 623
Query: 209 RPKRST--KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
RP++++ +Y C +AGL + G ++ QL + + D TPE+ A+ +
Sbjct: 624 RPQQASARRYLHCLRAGLGGWVAGLGLTAAQLAENVEAGYQKHKPADLTVTPEQHAAQYV 683
Query: 267 CAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFH 324
F ++ V++G +MAA EI+ EP +R+ VR + D AVV T PT GD+ +D FH
Sbjct: 684 APSGGFPTAGTVVKGGCYMAAAEIAAEPLIRQEVRKQYQDGAVVWTTPTAAGDTTLDPFH 743
Query: 325 QFAGVKWLREKPLRKFEDA-QWLLIQKAEEEKLLQVTI---------------------- 361
A VK L KPL KFE +L + +AE+ L++V
Sbjct: 744 PLAPVKRLVAKPLVKFEKGDHFLRLLQAEKAGLIKVEFGFPARPPPKEGQKGGGEATRKA 803
Query: 362 KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSG 421
+P+ +L + + ++S G+ ++A W+ R +L +A+ +FLLP M +EAR+ ++G
Sbjct: 804 PVPDTEAAELQNHLVDSFVSGGLGEAASAWDGVRRQVLGEAVRDFLLPLMEREARARLAG 863
Query: 422 RAKSWLLMEYGKALWNKVSVGPYQRK---DNDITPDEEAAPRVLACCWGPGKPETTFVML 478
A+S L E G LW S P Q K D+++ P+ RV+A C+GPG P TTFVML
Sbjct: 864 MARSAALDEAGDKLWGYASQAPLQVKLVDDDEVEPER----RVMAVCYGPGTPATTFVML 919
Query: 479 DSSGEVVDVL----FTGCLTLRSQ------NVRDQQSKKNDQERLLKFMMDHQPHVVVLG 528
D G +VD L F+G + R ++ D K +D +R+ F+++H+PH +V+G
Sbjct: 920 DPQGNLVDFLYCPQFSGPIPKRKALPGVVYSMYDDPKKGSDAQRIRSFILEHKPHAIVVG 979
Query: 529 AVNLSCTSLKDDIYEIIFKMVEEHPR---DVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
A + +L +D+ +I ++ E PR ++G +L I+ DE++ ++ENS + D+
Sbjct: 980 ASSPEARTLYEDLGQIRESIMLEDPRFMIELG--TGDLLIMMADEAVAAVWENSAAARDE 1037
Query: 586 LP-GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQV 644
L G V+RAVALGR L +PLA++A++CG GRE+L+ L PL+ L +E+ GM+E+V
Sbjct: 1038 LAAGSAPVVRRAVALGRQLLDPLALLASVCGGGREVLALGLHPLQAQLPEEERLGMVERV 1097
Query: 645 MVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFV--TA 702
MV +QVG+D+N W APLQF+ GLGPRKA +L R++ RAG ++ V
Sbjct: 1098 MVSAASQVGVDLNQVASSAWLAAPLQFVPGLGPRKAGALLRAVTRAGGFVESRNQVWREL 1157
Query: 703 HGLGKKVFVNAVGFLRVRRS--GQAASSSQFIDLL 735
G +VF NA +LR+R S + AS++ ID++
Sbjct: 1158 GVFGNRVFRNAAPYLRIRASVKNEPASAAPVIDVV 1192
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 926 YQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVT-ADEAMKLLS 984
YQ Q D YY E ++ +E A + K +F R I HP F+N++ D A +L
Sbjct: 1217 YQAGQ--DRYY--ELPPKKDPREAAEATRRKNKSNFVPRPIQHPLFKNMSQIDAAAQLQE 1272
Query: 985 AKEP-GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG- 1042
A P G++I+RPS G YL +++K+ + V+ H D E GK +K +G +L +
Sbjct: 1273 AGVPVGQAILRPSRNGIKYLGISIKLPESVW-HLDAEEMGKSAAALK----LGTSLVVEY 1327
Query: 1043 ------EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEF-PTR 1095
+T+EDLDE+ R+++PL +HL+A++++RK+ E L +K + P +
Sbjct: 1328 VPGGSRRETYEDLDELAARFVEPLQAHLQALVAHRKWTPQDWPRAKEDLIEQKQQVGPAQ 1387
Query: 1096 IVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKR 1137
VY G + + G F L YIR+ PH EY + P G+ FRK+
Sbjct: 1388 GVYCLGPAVDKAGMFFLGYIRTATPHCEYFMVTPDGYYFRKK 1429
>gi|443896072|dbj|GAC73416.1| transcription elongation factor SPT6 [Pseudozyma antarctica T-34]
Length = 1732
Score = 355 bits (912), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 291/1051 (27%), Positives = 496/1051 (47%), Gaps = 80/1051 (7%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
+K+P +Y L E+A KFG SS++L +S DP+++P + A F
Sbjct: 555 FKKPSLVGQYERTKNTVLSELAKKFGISSDELAANISSSSRQYSPRDPEQSPFKFAEQFT 614
Query: 267 CAMF--NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFH 324
A + S + L A+ M + EI +P +++ +R +F D A ++ PT G + ID H
Sbjct: 615 GAAWGAQSPEIALAKAKMMLSQEIGKDPILKREIRQLFKDAAEINIEPTERGMTVIDDQH 674
Query: 325 QFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSD 382
+A K++ KP R + AQ+L + +AE+E L+++ I L + L++ + +Y S+
Sbjct: 675 PYANFKFILNKPARLVPQQPAQYLQMLQAEDELLIKLDIGLKDVVLSRFENRLYTNYASE 734
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
G+ + +Q WN QR ++++AL L+P+ + + ++ LL + ++ G
Sbjct: 735 GIGEVSQAWNTQRREVIQEALKAHLVPNGRLWLKEWLREESRETLLRHCDFLMAKRLQEG 794
Query: 443 PYQ------RKDNDITPDEEAAPRVLACCWGPGKPETTFVM---LDSSGEVVDVLFTGCL 493
P+ R N +E+ PRVLA G G P V LD G +
Sbjct: 795 PFMSRSMAARNANPKIEEEDRIPRVLAVSHGGGDPRKDVVQAVYLDERGRFRE--HATFD 852
Query: 494 TLRSQNVRDQQSKKNDQER-------------LLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
LR R Q ++ + ER +K + +P VVV+ ++ LK +
Sbjct: 853 DLRPLTARQLQERELETERTRGKAEFVDHRGDFVKLLKQRRPDVVVVSGWSVRTAELKKN 912
Query: 541 IYEII----FKMVEEHPRDVGHEMDE--LSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
+ E++ ++ ++ D E ++ + +V + + R+Y++S ++++ P +
Sbjct: 913 VRELVDMAHQEICDDDRLDSESERNQALIDVVTCHDDVARIYQHSSRAAEEFPELNELGR 972
Query: 595 RAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGL 654
+AL RY Q+P+ A L G ++ + L P + L D E+ + N G+
Sbjct: 973 YCLALARYAQSPVNQFAAL---GNDLTAVILDPNQRLLPQDRLRLHFERCIGAEVNDSGV 1029
Query: 655 DINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA--GAIFTRKDFVTAHGLGKKVFVN 712
DIN A+ + L +++GLGPRKA +L ++ G + R ++ L +VF N
Sbjct: 1030 DINQAVTSTYLQTMLPYVAGLGPRKAHALVNAINTKLEGTLINRTLLLSRSILPFQVFQN 1089
Query: 713 AVGFLRVRRSGQ-AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDAL 771
FLR+ + A D+LD TRIHPE Y +++A + N+ E DL + +L
Sbjct: 1090 CASFLRIEQDMLLEADEDDVPDVLDSTRIHPEDYDFPRKMAADALNKH-EEDLEGEHPSL 1148
Query: 772 EMA-IEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEP 827
+ D D L T LD + + E+K E KR TL L ++ELI + D R Q +EP
Sbjct: 1149 PCKELMEDADPADKLSTLDLDNYAQMLYERKGEKKRATLLLCKQELIKPYDDLRKQQREP 1208
Query: 828 SQDEEFYMISGETEDTLAEGRVVQATVRRVQ-GQRAI-----CVLESGLAGMLMKEDYSD 881
S E M +GET TL+EG VV V RVQ G R C L+SG+ G++ E +D
Sbjct: 1209 SAAEMLTMFTGETPKTLSEGFVVSVEVMRVQEGNRMAEGHVRCRLDSGIEGIIEAEYTTD 1268
Query: 882 DWR--DSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE---SEMRNNRYQHCQNLDPYY 936
++ L D + L ++ I + V L R E R Q D +Y
Sbjct: 1269 NYTPGSVRLRDLVRPQQTLDALVRQIDTDSCTVKLSIRPWDLQEQHRARDQGKTPTDKFY 1328
Query: 937 HEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPS 996
+ ++ + +EQ A K K + + R+I HP + N +A++ L + G ++RPS
Sbjct: 1329 DKTKADKWNEQAAA-KAKARVQARRQNRVIDHPNYHNFNYKDAVQFLGGQPRGSVVVRPS 1387
Query: 997 SRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDR 1055
S+G +L +T KV +GVY + D++E D +S +G+ L+I G ++ DLDE++
Sbjct: 1388 SKGDDHLAVTWKVDEGVYQNIDVLE-----LDKESEYSLGRVLRIEGMGSYSDLDELIVN 1442
Query: 1056 YIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI 1115
++ P+V ++ M+++ K++ + ++ L P R VY FG++ + PG F L++
Sbjct: 1443 HVKPMVHMVEMMMNHEKYKGADEEDLHRFLTNWSLANPQRSVYAFGLNRDRPGYFNLSFK 1502
Query: 1116 RSTNPHHEY--IGLYPKGFKF-RKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP 1172
S + + + + P FK D+ L F+ Q + S+ A
Sbjct: 1503 ASRDAAIQTWPVKVLPNAFKLGPADQLADVAALCNAFKT-----QYTTQASMARGA---- 1553
Query: 1173 MRSPANGGSTASAGSG----WGGSTNEGGWN 1199
++P GG T + G G GG T GG N
Sbjct: 1554 -KTPYGGGRTPAPGMGGATPMGGRTPYGGRN 1583
>gi|426200101|gb|EKV50025.1| hypothetical protein AGABI2DRAFT_176563, partial [Agaricus bisporus
var. bisporus H97]
Length = 1522
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 284/1068 (26%), Positives = 493/1068 (46%), Gaps = 111/1068 (10%)
Query: 208 KRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK- 266
K P R + Y + ++A FG Q+ + ++D + P A F
Sbjct: 489 KMPSRISAYEVAKNTVVSKLAEGFGLEPYQVVANFIASERLYFVQDQELNPTIYAEQFAD 548
Query: 267 --CAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFH 324
+ + +L+ AR + + E+ +P +R ++R IF ++A ++ PT G ID H
Sbjct: 549 PDPVKVQTPEGLLRRARLILSTELGKDPQLRDHIRKIFKEDAQITVEPTERGIVKIDQNH 608
Query: 325 QFAGVKWLREKPLRK-FEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ K+L KP+R E AQ+L I AE E L+ V+I LP + + SD
Sbjct: 609 PYNNFKYLLRKPIRDMLESAQFLHILAAEAEHLVTVSIFLPNELKADFEQKLSNAFSSDN 668
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+++A+ WN +R +++DA++ L+ K AR + + +L L +++V P
Sbjct: 669 FNEAARAWNIERNQVVQDAIEQHLILLGAKWAREYLREEVEDFLAQSCAAKLRKRLNVAP 728
Query: 444 YQRKDNDITPDEEA--APRVLACCWGPGKPE---TTFVMLDSSGEVVDVLFTGCLTLRSQ 498
Y IT +A VLA WG G P+ + V LD +G +R
Sbjct: 729 Y------ITSAMKAGDTSSVLAVSWGKGDPQKDAISIVFLDEAGR-----------MREH 771
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
D ++ + + + +P V+V+G +++ L + E+I + P G
Sbjct: 772 TKVDNLYDSDNVDEFIDLLKRRKPDVIVIGGFSMATLKLSQRVKEVIRGGNSQIP---GQ 828
Query: 559 E-----MDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
E + ++ ++Y + + R+Y++S ++++ G K V L RY Q+PL A L
Sbjct: 829 ESSWGQVTDVPVIYVYDDVARMYQHSHRAAEEFGGLSSTAKYCVGLARYTQSPLNEFAAL 888
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMI-EQVMVDVTNQVGLDINLAIHREWQFAPLQFI 672
GR+I + + L P +K ++ E+ +VD+TN+VG+DIN A+ + L F+
Sbjct: 889 ---GRDITAITFEEDDQHLVPIDKLLLVFERALVDITNKVGVDINRAVTDSYYQHLLPFV 945
Query: 673 SGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ- 730
GLGPRKA +L + + G + R F+ L K+F+NA FLR+ R + +
Sbjct: 946 CGLGPRKAQALVKKIGALGGTLVNRTQFINNSLLTTKIFMNASAFLRIAREDNEMRTFKN 1005
Query: 731 ------FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA--LEMAIEHVRDRP 782
D LDDTRIHPE Y LA+++A + D E D++D+ + + + + +
Sbjct: 1006 RRDDGDAPDPLDDTRIHPEDYELARKMATDALELD-EEDIHDEHPSHVVTLIMNDADNEK 1064
Query: 783 DLLKTYLLDRHIK--EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
L++ L + I + + KR TL +IR EL+ + + R+ + P E M+SGET
Sbjct: 1065 KLMELNLDEFAISLYQANYDQKRHTLNVIRDELLKSYAEQRDAFLLPQDMEVVTMLSGET 1124
Query: 841 EDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGD---- 896
E TL G +V A V R A L+SG+ G++ + SD+ ++++ L +G
Sbjct: 1125 ERTLRHGLMVSAVVYRTARNMAFVRLDSGVEGVITSKSLSDN--NAQVESFLRKGQTISG 1182
Query: 897 ILTCKIKSIQKNRYQVFLVC-------RESEMRNNRYQHCQNLDPYYHEERSSRQSEQEK 949
I+ + I + + V L C R+ E+R R D YY R + +
Sbjct: 1183 IIIHRTIDIAHDIFNVELSCQRQLLEERDDEIRKVR------PDIYYDAVREDKDRDMLN 1236
Query: 950 ARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKV 1009
+K E + R+I HP F N A +A L ++ G+ +IRPSS+G +L +T KV
Sbjct: 1237 RKKRAETDRSR---RVIKHPNFHNFKAAQAEVFLEKQQRGDVVIRPSSKGIDHLAVTWKV 1293
Query: 1010 YDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLS 1069
DG+Y H D+ + D S G+ + + T+ DLDE++ +I + ++ +++
Sbjct: 1294 DDGLYQHIDVTDSNAD----PSGQTTGQLIVDSKFTYADLDELIVNHIQAMARRVEELMA 1349
Query: 1070 YRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEY--IGL 1127
+ KF++G + E+ L+ A P + +YGF ++ + PG F L ++ + N + I +
Sbjct: 1350 HEKFKQGPEDELHLFLKNSLAANPAKSMYGFTLNRKKPGHFNLCFLANKNSTVQTWPIRV 1409
Query: 1128 YPKGFKFRKRMFEDIDRLVAYFQ-RHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAG 1186
P+ + + + L F+ RH+ + + S ++P GG T +
Sbjct: 1410 SPEAYFLFEAAAVGVPELCDAFKVRHLHESKNTSGS-----------KTPFAGGRTPARL 1458
Query: 1187 SGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGG 1234
G +TPG + R+ GR +P G PYG
Sbjct: 1459 GG---------------ATPGHASARH-----VGRTPNPYGGQTPYGA 1486
>gi|342321671|gb|EGU13603.1| Transcription elongation factor SPT6 [Rhodotorula glutinis ATCC
204091]
Length = 1579
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 299/1080 (27%), Positives = 499/1080 (46%), Gaps = 107/1080 (9%)
Query: 208 KRPKRST---KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASN 264
KRPKR+T +Y + K + +A S L ++ ++ EDP ++P ++A
Sbjct: 509 KRPKRATIENEYQTARKTVVTRLAELINISPADFALDVTQQQKTHFAEDPDKSPLDLADE 568
Query: 265 FKC-AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSF 323
F F + A L A+ + E+ EP +RK R F D AVV+ T G++ ID
Sbjct: 569 FVVDPEFPTRHAALAAAKMILVTELGHEPLLRKEARRFFKDFAVVNVAATKAGEAKIDVL 628
Query: 324 HQFAGVKWLREKPLRKF-EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSD 382
+ + K+L+ KP+ +F AQWL I AE E L+ +I LP+ + +KL SD + YLSD
Sbjct: 629 NPYYAFKYLKNKPVVEFTRSAQWLQILAAEVEGLVTASIDLPQAAYDKLMSDFSKMYLSD 688
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
S A WN RE ILK A++ +LLP R + ++ + + L ++
Sbjct: 689 YTSALADEWNKLREEILKQAVEEYLLPQGAAWTRGWIKEESEEAVADACKRKLEKRIDAA 748
Query: 443 PYQRKDNDITPDEEAAPRVLACCWGPGKPE---TTFVMLDSSGEVVDVLFTGCLTLRSQN 499
P+ R+D+ + P + P VLA G G P+ V LDS G R
Sbjct: 749 PWCRQDDTMEPGD--TPSVLALSNGRGDPKRDSVVGVFLDSDGH-----------FREHF 795
Query: 500 VRDQQSKKNDQ---ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV------- 549
D + D+ E+ +F+ +P VVV+G + + L D + I + V
Sbjct: 796 KFDTIAGDMDEAQREQFTEFLKRRRPQVVVVGGFSPAVPHLLQD-FRIFAEGVSTQLYED 854
Query: 550 ---------------EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
E R E +IVY + + ++Y+NS+ ++ + K
Sbjct: 855 GAADDDEADEGKSPDEVERRKRNRAAFESTIVY--DEIAKIYQNSQRAAQEFTELSTLGK 912
Query: 595 RAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGL 654
V L RY Q+PL A L G+++ + P + +L D+ +E+ ++ VTN+VG+
Sbjct: 913 YCVGLARYTQSPLNEYAAL---GQDLTALSYDPNQKYLAKDKLVQALERSLISVTNRVGV 969
Query: 655 DINLAIHREWQFAPLQFISGLGPRKA-ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNA 713
DIN A + L ++SGLG RKA A +++ G + TR V + + +F+N
Sbjct: 970 DINRATRDPYYAHLLPYVSGLGLRKADACIKKINAIGGTLTTRSGLVMQSIVTRNIFINV 1029
Query: 714 VGFLRVRRSGQAASSSQFI------DLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDD 767
GFLR+R+ AA + D+LDDTRIHPE Y +A+++A + D E DL
Sbjct: 1030 AGFLRIRQDDLAADLELEVEGQEDPDVLDDTRIHPEDYDVARKMASDAMEYD-EEDLEGA 1088
Query: 768 EDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWRNQY 824
+ +A + + D L LD E + + KR TL+ IR EL FQ+ R +
Sbjct: 1089 APSKAVA-DLLDDDVRKLDELALDEFADELSKVLGQPKRLTLHRIREELKKPFQEKRVPF 1147
Query: 825 KEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV-LESGLAGMLMKEDYSDDW 883
P +E F M +GET TL +G +V V RV A+ L+ G+ G + +E ++
Sbjct: 1148 VVPGPEERFTMFTGETRSTLDQGLIVPVRVLRVTPDEAVIARLDCGINGTIEREYRTNGT 1207
Query: 884 RDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQ-NLDPYYHEERSS 942
+ KL G L I S+ + V L +E+ + + Q D ++ +ER +
Sbjct: 1208 NVA----KLRAGQTLQAMIISVDYGNFSVNLTTQENMIDAGDVERRQVKQDVWFDKEREA 1263
Query: 943 RQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSY 1002
+ + + +++ K +R+I HP +Q+++A +A + L+ + G+ +IRPSSR +
Sbjct: 1264 AERRIAQQQSQRQAGK---TKRVINHPNYQDISAGKAEEYLANMQRGDCVIRPSSR-EDH 1319
Query: 1003 LTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED-TFEDLDEVVDRYIDPLV 1061
+ +T KV +G+Y H + E K + +G L+I + + DLDE++D +I +
Sbjct: 1320 IAVTWKVAEGIYQHIAVHELNK-----PNAYSLGTQLRIDDKHRYSDLDELIDAHIKQMA 1374
Query: 1062 SHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEH--PGTFILTYIRSTN 1119
+ + S +F KG+K ++++ L P + +Y FG + G +L + +
Sbjct: 1375 RKVNELTSNERF-KGTKEQLEKFLSTWTNANPGKSIYAFGWESDRRKAGQVVLGFKTNEK 1433
Query: 1120 PHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPA 1177
+Y + + P+G+ + + DI L+ F+ G + V + P R+P
Sbjct: 1434 SPVQYWPVFVVPEGYMLKGSVHGDIPSLINAFKIAYSSGMGGA-----RVPNLAPGRTPY 1488
Query: 1178 NGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGR 1237
G T + + +G + N + GSRT N G P+P G GR
Sbjct: 1489 GAGVTGTTPNPYGRTPNP-----HLNPQQGSRTPIN------------YGQPQPTYGTGR 1531
>gi|63054631|ref|NP_594487.2| transcription elongation factor Spt6 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|19862908|sp|Q09915.2|SPT6_SCHPO RecName: Full=Transcription elongation factor spt6; AltName:
Full=Chromatin elongation factor spt6
gi|159884008|emb|CAB71845.2| transcription elongation factor Spt6 (predicted) [Schizosaccharomyces
pombe]
Length = 1365
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 311/1115 (27%), Positives = 520/1115 (46%), Gaps = 132/1115 (11%)
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL-DKKWLLL 133
L++PFI +R++ + + E+N + TP L + LW I L K W L
Sbjct: 331 LEVPFIWQHRRDYIVH--NNRERNTI----------TPLLSQND-LWNIFFLCTKFWSLH 377
Query: 134 QKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNL 193
K++ L+ Y + L +N L + EAA + +DD L +
Sbjct: 378 SKKQDILKLY---------------SDLGINDDL---VVPFCEAASSLDAIDD--LNDYI 417
Query: 194 HFPPGEVGVDEGQY-----KRPKRSTKYS---SCSKAGLWEVASKFGYSSEQLGLQLSLE 245
HF E D +RP+ S KYS K+ L+ + +FG S++ ++
Sbjct: 418 HFTYSEQIRDRALLMGTGLRRPQGS-KYSFFEKFRKSSLYNLVKEFGMSAKDFSFNVAQG 476
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
+ED +PEE++ + +S + VLQ AR + A EI +P RK R +
Sbjct: 477 ARLRFVEDNTLSPEELSRTYVTNELSSPEQVLQKARRVLAEEIIHDPQFRKSFRDKLYNA 536
Query: 306 AVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKL 363
VV+ T G I S H + K+L+ KPL FE L ++ KAEEE L+Q++I+
Sbjct: 537 GVVTVLATQKGVRKIGSEHPYYEFKYLKRKPLGSFELEPILFLKMLKAEEEGLIQLSIEF 596
Query: 364 --PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLM 419
P+D +F E ++SD S++A WN QREL+LK+ F L P ++E +
Sbjct: 597 EDPDD----VFKGLLELFVSDNFSENAMQWNAQRELVLKEVFKRFSALAPDAIRET---L 649
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTF--VM 477
R L M L++++ PY+ + D P VLA G G+ V
Sbjct: 650 RSRYLDELGMRCRNQLFSRLDQAPYEPSTKNF--DRGTIPSVLAVSNGKGESSDAIICVF 707
Query: 478 LDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
+D GE D +L+ ++RD +Q +F+ +P V+ + +++S +
Sbjct: 708 VDDVGEPTD-------SLKLADLRDLA----NQAMFAEFVEKVKPDVIGVSGMSVSAHKI 756
Query: 538 KDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAV 597
+ +H +D + + ++ ++ + RLY+NS + D+ P V
Sbjct: 757 R------------QHVQDSLTSHEPVDLIMVNDEVARLYQNSTRAVDEFPTLPTISCYCV 804
Query: 598 ALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDIN 657
AL RY+QNPL A + GR+++S P ++ L PD + +E +VD+++ VG+DIN
Sbjct: 805 ALARYVQNPLFEYAAM---GRDLMSLSFDPWQHLLPPDVLWKYLETALVDISSLVGIDIN 861
Query: 658 LAIHREWQFAPLQFISGLGPRKA-ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGF 716
A+ +++ L +I+GLGPRKA L++ G I R D ++ + +KVF+N F
Sbjct: 862 EAVTNKYEANILPYIAGLGPRKADYVLKKIAATGGRIDNRSDLISKQIMSRKVFINCSSF 921
Query: 717 LRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY------------NRDIEGDL 764
+ +D+LD TRIH E Y LA+++A + NR + L
Sbjct: 922 FIIPNDEYPN-----MDILDSTRIHNEDYELARKMASDALELDEEDIEELETNRGVVYHL 976
Query: 765 ---NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWR 821
N+ E+ +E D+ L+R +K KR TL IR EL + + R
Sbjct: 977 LEENETGKLDELVLEEYADQ--------LEREFHQK----KRNTLEKIRLELKDPYGEQR 1024
Query: 822 NQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSD 881
N + + + E F M++GE + L +V VRRV + L+ G+ G + ++ SD
Sbjct: 1025 NVFHKLTPSEIFLMLTGENPEELQADAIVPVNVRRVTNRFVAVKLDCGIDGNIKADEVSD 1084
Query: 882 DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR--NNRYQHCQNLDPYYHEE 939
D+ L G + I S+ + + V L R S ++ N++ Q + Y+ E
Sbjct: 1085 DFIPP--PQLLQVGQTVEGVIISLDEANFMVDLSLRNSVLQSANSKRQTSSHRTSYWDTE 1142
Query: 940 RSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRG 999
R +E+ +A + E R+I HP F+++ A +A LS + G+ +IRPSS+G
Sbjct: 1143 AEKRDTERMQAETQAE----QRVARVIKHPLFKDLNASQAEAYLSKMQVGDLVIRPSSKG 1198
Query: 1000 PSYLTLTLKVYDGVYAHKDIIEGGKDHKDI--KSLVGIGKTLKIGEDTFEDLDEVVDRYI 1057
++ +T KV +G Y H D++E K+++ + L+ G+ K+ + DLDE++ +I
Sbjct: 1199 SDHIVVTWKVAEGSYQHIDVLELEKENEFTIGQKLLVKGRFEKMTY-QYSDLDELIVLHI 1257
Query: 1058 DPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRS 1117
+ + M + KFRKG++AE ++ L P R Y F H+HPG FIL + S
Sbjct: 1258 KAIAKKIDEMCIHDKFRKGTQAETEKWLESYSEANPKRSCYAFCFDHQHPGYFILCFKAS 1317
Query: 1118 TN-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
N P + + + P F + ++ D+ L F+
Sbjct: 1318 VNSPVTAWPVKVIPNAFFLQGNVYGDMTALCNGFK 1352
>gi|323507706|emb|CBQ67577.1| related to transcriptional regulator protein SPT6 [Sporisorium
reilianum SRZ2]
Length = 1730
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 325/1265 (25%), Positives = 567/1265 (44%), Gaps = 132/1265 (10%)
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
L++PF+ +R +E L+ D EV D R+ L + L+ + L K+ L
Sbjct: 396 LEVPFLFQHRFDELEHLIID----EV-----DGTYRSIDLLTRRELYTLSGLALKFKTLL 446
Query: 135 KRKSALQSYYKKRYEE----------------ESRRIYDETRLALNQQLFDSISKSLEAA 178
RK L++ + K + + +SR + R+ +Q+ +L A
Sbjct: 447 VRKDQLRATFNKIHVDIKREHVADDADDADVAQSREASNAARVESSQRQRAIFEDTLAKA 506
Query: 179 ETEREVDDVDLKFNLHF--------PPGEVGVDEGQ-------------------YKRPK 211
+ E+ D+ L + G D+ +K+P
Sbjct: 507 ASLEEISDITEYLTLRYGQKMRDAQALSTNGTDQAAEDMDGLTLNGEPVVSATPGFKKPS 566
Query: 212 RSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMF- 270
+Y + E+A KFG SS++L ++ DP+E+P + A F + +
Sbjct: 567 LVGQYERTKNTVISELAKKFGISSDELASNITSHTRQYSPRDPEESPFKFAEQFTGSAWG 626
Query: 271 -NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
+S + L A+ M + EI +P +++ +R +F D A ++ PT G + ID H +A
Sbjct: 627 AHSPEIALAKAKMMLSQEIGKDPILKREMRQLFKDAAEINIEPTERGMTVIDDQHPYANF 686
Query: 330 KWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
K++ KP R + +Q+L + +AE+E L+++ I L + L++ + +Y S+GV +
Sbjct: 687 KFILNKPARLVPQQPSQYLQMLQAEDELLIKLDINLKDVVLSRFETRLFNNYASEGVGEV 746
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ-- 445
++ WN+QR ++++AL L+P+ + + ++ LL + +V GP+
Sbjct: 747 SKQWNEQRREVIQEALKVHLVPNGRLWLKEWLREESREMLLRHVDVLMTKRVEKGPFMSR 806
Query: 446 ----RKDNDITPDEEAAPRVLACCWGPGKPETTFVM---LDSSGEVVDVLFTGCLTLRSQ 498
R + +E+ PRVLA G G P V LD G + LR
Sbjct: 807 SMIARNRDPKIEEEDRIPRVLAVSHGGGDPRKDVVQAVYLDERGRFRE--HATFDDLRPL 864
Query: 499 NVRDQQSKKNDQER-------------LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
R Q ++ + ER +K + +P V+V+ ++ LK ++ E+
Sbjct: 865 TQRQLQERELELERTRGKAEFADHRADFIKLLKQRRPDVIVVSGWSVRTAELKKNVRELA 924
Query: 546 F----KMVEEHPRDVGHEMDE--LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVAL 599
+ +E D E D+ + +V + + R+Y++S ++++ P + +AL
Sbjct: 925 AMAHQDICDEERLDSDLERDQAVIDVVTCHDDVARIYQHSSRAAEEFPELSELGRYCLAL 984
Query: 600 GRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLA 659
RY Q+P+ A L G ++ + L P + L D +E+ + V N G++IN A
Sbjct: 985 ARYAQSPVNEFAAL---GNDLTAVILDPNQRLLPQDRLRLHLERCIGAVVNDNGVEINQA 1041
Query: 660 IHREWQFAPLQFISGLGPRKAASLQRSLVRA--GAIFTRKDFVTAHGLGKKVFVNAVGFL 717
+ + L F++GLGPRKA +L ++ G + R ++ + L +VF N FL
Sbjct: 1042 MTSTYLQTMLPFVAGLGPRKAHALVNAISTKLEGTLINRTLLISRNILTFQVFQNCASFL 1101
Query: 718 RVRRSGQ-AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMA-I 775
R+ + A D+LD TRIHPE Y +++A + N+ E DL + +L +
Sbjct: 1102 RIEQDMLLEADEDDVPDVLDSTRIHPEDYDFPRKMAADALNKH-EEDLEGEHPSLPCKEL 1160
Query: 776 EHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEE 832
D D L T LD + + E+K E KR TL+ R ELI + D R EP+ +E
Sbjct: 1161 MEDADPADKLNTLDLDNYATMLFERKGERKRATLHSCRSELIKPYDDLREVQVEPTPEEM 1220
Query: 833 FYMISGETEDTLAEGRVVQATVRRVQGQ------RAICVLESGLAGMLMKEDYSDDWR-- 884
M +GET TLAEG VV V RVQ R IC L+SG+ G + E D++
Sbjct: 1221 LTMFTGETPKTLAEGFVVSVEVMRVQEGNRMQEGRVICRLDSGIEGTIEAEHTVDNYVPG 1280
Query: 885 DSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN-RYQHCQNLDPYYHEERSSR 943
L + + L ++ I+ V L E+++ +Q LD +++ + +
Sbjct: 1281 SVRLRELVRPQQTLDALVRKIEPELCTVQLSISPWELQHRATHQGKTPLDAKFYDVKKAE 1340
Query: 944 QSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYL 1003
Q ++ A K K + + R+I HP + N A++ L+++ G ++RPSS+G +L
Sbjct: 1341 QWNEQAAAKAKLRVQARRQNRVIDHPNYHNFNYKSAVQFLASQPRGSVVVRPSSKGDDHL 1400
Query: 1004 TLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVS 1062
+T KV D VY + D++E K+ S +G+ L+I G ++ DLDE++ ++ P+V
Sbjct: 1401 AVTWKVDDDVYQNIDVLELDKE-----SEYSLGRVLRIEGMGSYSDLDELIVNHVKPMVH 1455
Query: 1063 HLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHH 1122
++ M+++ K++ + ++ L P+R VY FG++ + PG F L++ + +
Sbjct: 1456 MVEMMMNHEKYKGADEEDLHRYLTNWSLANPSRSVYAFGLNKDRPGYFNLSFKANRDAAI 1515
Query: 1123 EY--IGLYPKGFKF-RKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANG 1179
+ + + P FK D+ L F+ Q + S+ A ++P
Sbjct: 1516 QTWPVKVLPNAFKLGPADQLADVAALCNAFKT-----QYTTQASMARGA-----KTPYGD 1565
Query: 1180 GSTASAGSGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHP-----SGLPRPYGG 1234
G T + G GG+T GG G G G G P S P PYGG
Sbjct: 1566 GRTPA--PGLGGATPMGGRTPYGVVRNGMAGGATPGLGAAGGYGTPVMNMASATPNPYGG 1623
Query: 1235 RGRGR 1239
GR
Sbjct: 1624 GAYGR 1628
>gi|353242943|emb|CCA74540.1| related to transcription elongation factor SPT6-Laccaria bicolor
[Piriformospora indica DSM 11827]
Length = 1652
Score = 347 bits (889), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 310/1233 (25%), Positives = 555/1233 (45%), Gaps = 175/1233 (14%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
LD L +Q ++PFIA + K +C+ + D Q E+ + + LW ++ L
Sbjct: 383 LDFLFIQGFEVPFIATH-KIDCIWHIDDGAQIELLSLSE--------------LWRVYTL 427
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
+K+ +R+ L++ + K + D Q DSI +A E
Sbjct: 428 GQKFRAYLERRRGLEATHAKLSSPDDYYKID------IQPKIDSIEMITDATEW------ 475
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK 246
+ L+ L + D+G+ KRP R + Y K+ + ++ F + ++ ++ +
Sbjct: 476 LTLQHRLELRDAAMIEDDGKVKRPTRVSAYEMLKKSQIDQLVKDFCPPAREISRKVRQVR 535
Query: 247 ------MGDELEDPKETPEEMASNF-------------------KCAMFN-------SSQ 274
+ L+DP +P E + + AM S Q
Sbjct: 536 SSRGTVVHTFLDDPALSPLEHVTPYVDAEKQRLIEIERKRWASNPTAMDGPTPIKEVSGQ 595
Query: 275 AVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLRE 334
+L A+ + A+E+ +P +R+ +R +F ++ VS PT G ID H + K+L +
Sbjct: 596 ELLDRAKMLIAIELGKDPLLRQVIRDLFKESGHVSVTPTEKGLVKIDETHPYYNFKYLDQ 655
Query: 335 KPLRKF-EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWND 393
KP+ +Q+L IQ AE + L+ V++ + ED + +D + SDG S ++ WND
Sbjct: 656 KPVTAMTRGSQFLHIQAAEADHLVTVSVGIREDVRVQFVNDLIQAVSSDGYSTVSKQWND 715
Query: 394 QRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY-QRKDNDIT 452
R + +A+D LP K R + + +L G L +V+V P+ ++ D
Sbjct: 716 VRAQAVTEAVDKHFLPFGSKWIREWLREEVEDFLAKACGDELERRVNVKPFIPVREPDTP 775
Query: 453 PDEEA-APRVLACCWGPGKP--ETTFVM-LDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
P ++A P V+A WG G P + FV+ +D +G D + N++D+ ++
Sbjct: 776 PSDDAKVPGVMALSWGDGDPKKDAIFVVYMDEAGRFRD-------HAKFDNLKDENLARD 828
Query: 509 DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII--------------------FKM 548
+ HQP +VV+G + S L D + ++ FK
Sbjct: 829 ----FGGMVKKHQPDLVVVGGFSASTHRLYDVVRLLLNDPSLAKEQAESNKKVELGDFKP 884
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
+ P DV + +S+ R+Y++S+ ++++ + V L RY Q+PL
Sbjct: 885 AVDRPYDVR---------FVQDSVARIYQHSKRAAEEHGTLPILTRYCVGLARYAQSPLN 935
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGM-IEQVMVDVTNQVGLDINLAIHREWQFA 667
A L G +I + L P EK + +E+ +V+V N+VG+DIN A+H ++ A
Sbjct: 936 EYAAL---GPDITAITFDQDSQHLIPREKLLISLERALVNVVNRVGVDINRAVHDQYYQA 992
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRV-------- 719
L F++GLGPRKA + R + G++ R+ FV + KV++N+ GFLR+
Sbjct: 993 LLPFVAGLGPRKAQHIVRKVAALGSLANREQFVHREIMTTKVWLNSAGFLRIPQDIYSKS 1052
Query: 720 ----RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAI 775
R SG+ + D LD TR+HP+ Y LA+++A + D E ++ AL +
Sbjct: 1053 YQASRVSGETIAIRDMQDPLDGTRLHPQDYDLARKMAVDALGEDEEDYADEHPSALVVKF 1112
Query: 776 -----------------------EHVRDRPDLLKTYLLDR---HIKEKKRENKRETLYLI 809
E R + + L LD ++ + + E KR TL LI
Sbjct: 1113 LKGDFEDADSKGDGQDRSKLSDSEKRRKKENALNLLNLDDFALNLLQSQNEQKRMTLSLI 1172
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
+ EL+ F D R + P + E M++GE++ +L G ++ V R++ I L S
Sbjct: 1173 KAELVAPFHDNRPAFVPPDEWEVLAMLTGESDKSLRLGLILSVQVLRIKPNFIIVKLASN 1232
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR--NNRYQ 927
L G++ + +D + + G + ++ ++ + + L R S++ + YQ
Sbjct: 1233 LEGIINAQYLGEDGDTVQPDRIVKVGQAIRARLIALNPREFYIELSSRPSDLLTGDESYQ 1292
Query: 928 HCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKE 987
+ +D Y+ ++++R E + +K ++K+ R++ HP F N+ + +A + LS +
Sbjct: 1293 RVE-VDQYFDNDKATRDKEILQRKKN---SQKNHARRIVKHPNFFNMNSKQAEEHLSKQH 1348
Query: 988 PGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKD----IKSLVGIGKTLKIGE 1043
G+ +IRPSS+GP +L +T KV +Y H D++E D D K +V G+ G+
Sbjct: 1349 RGDVVIRPSSKGPEHLAVTWKVDRNIYQHIDVLEVPMDANDPMAGYKYIVDHGRE---GQ 1405
Query: 1044 DTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGIS 1103
F DLDE++ ++ + + ++++ K+R GS ++ L + P + +Y FG++
Sbjct: 1406 REFSDLDELIVNHVKAMARKVDELMAHDKYRHGSPVDLANNLTMMVNANPDKSLYVFGLN 1465
Query: 1104 HEHPGTFILTYIRSTN-PHHEY-IGLYPKGFKFRKRMFEDIDRLV-AYFQRHID------ 1154
E PG F L + + N P + + + P+ + F + +L A+ RHI
Sbjct: 1466 PERPGYFNLMFKANVNAPVVTWPVKVTPEAYVFFGEKLPSVPQLCDAFKMRHIGPLAGAR 1525
Query: 1155 ------DPQGDSAPSIRSVAAMVPMRSPANGGS 1181
P G P R+ AA P PA +
Sbjct: 1526 PLHSGMTPYGARTPGGRTPAASRPPGPPAQSKT 1558
>gi|361124041|gb|EHK96165.1| putative Transcription elongation factor SPT6 [Glarea lozoyensis
74030]
Length = 1408
Score = 346 bits (888), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 299/1131 (26%), Positives = 532/1131 (47%), Gaps = 94/1131 (8%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I + L+ + ++++P++ +RK+ + + + N D L LW
Sbjct: 326 IGKVLEFFVVDEVEVPYVFQHRKDYLIHAKRTRSSHHSNGDGEYTVTAEKLLNLDD-LWR 384
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
I +LD K+ L ++++ L+ Y E ++ D S+ L A T
Sbjct: 385 ILELDLKFRALVEKRNILEKTYDNL--REVAKVRDR-----------SVEDMLPDAATME 431
Query: 183 EVDDVDLKFNLHFPP--GEVGVDEGQYKRPKR----STKYSSCSKAGLWEVASKFGYSSE 236
E+ D+ H+ ++ G K +R + Y K+ + + +G + +
Sbjct: 432 ELQDIQDYIYFHYSAELKDMAASTGDSKEKRRPGGKHSVYERIRKSQCYALVKLYGITPD 491
Query: 237 QLGLQLSLEKMGD-----ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
QLG + +L+K+ + E+ED +TP ++A + F + VL+ AR M A E+
Sbjct: 492 QLGKK-ALKKIDEHGRNYEIEDASQTPIDLADSLTSDEFRQGEEVLKAAREMFAEELFMH 550
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ-- 349
P +R + R + V+ T G ID H + +K+L+ + + + ++
Sbjct: 551 PRMRTHFRKNYYGAGVIHCKRTEKGLRKIDEQHPYYELKYLQNQTIMDIAGHPEIFLKML 610
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--L 407
KAEEE L+ V I L +++ + + S S A WND+R+ +L A L
Sbjct: 611 KAEEEGLIDVRITLQDEA--SFRRNLVAEFRSQNYSDLADAWNDERKRVLDLAFGKLERL 668
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
+ VKE M + +L + K+ PY+ + PRVL+ G
Sbjct: 669 IAKGVKEN---MRTECQDAILKICREEYSRKLDQAPYKPHGMVLG----TIPRVLSLSNG 721
Query: 468 PG--KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
G + T + ++ G V++ LT RD++S+ E + + +P V+
Sbjct: 722 NGDMRDATCWAWVEEDGRVLESGKFNNLT------RDEKSR----EEFVALVQRRRPDVI 771
Query: 526 VLGAVNLSC----TSLKDDIYEIIFKMVEEHPRDVGHEMDEL-SIVYGDESLPRLYENSR 580
+ ++ T L+D + E + E + G + EL +V ++ + RLY++S+
Sbjct: 772 GISGFSVETHKLITGLRDLVEERNLRGPEFEDQSTGEDKRELLEVVVVNDEVARLYKDSK 831
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
+ + PG + VAL +YLQNP+ A L G++I S + P + L D+
Sbjct: 832 RAINDHPGIPSLGRYCVALAKYLQNPMKEYAAL---GKDITSLQFHPCQQLLPEDKLRRQ 888
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFV 700
+E MVD+ N G+DIN AI + A L ++ GLGPRKA S+ +++ + G I +D +
Sbjct: 889 LETAMVDMVNLCGVDINEAISDPYTAALLPYVCGLGPRKATSVLKTISQNGGIVNTRDEL 948
Query: 701 TAHG-------LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
+G +V+ N FL + + SSS D LD+TR+HPE Y L +++A
Sbjct: 949 VGDPDTGKLPVVGPRVWNNCASFLSI----EYDSSSPHSDYLDNTRVHPEDYELGRKMAA 1004
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVR-----DRPDLLKTYLLDRHIKEKKR---ENKRET 805
+ D E + ++ AI VR D + + +L+ + ++ +R + KR T
Sbjct: 1005 DALELDEEDVKAEVDEGGPGAI--VRKLVKDDEQEKVNDLILEEYAEQLERNYNQRKRAT 1062
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV 865
L IR EL +++ R ++ + S DE F M+ GET+++LAEG +V A +R V+ + AI
Sbjct: 1063 LETIRAELQQPYEELRRKFTKLSVDEIFTMLCGETKESLAEGMIVPANMRIVKDEFAIAK 1122
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
L+SG+ G + D SD ++ L+ G I+ KI + + + L RE+ +R
Sbjct: 1123 LDSGIEGRVELMDGSD--KEMPLNRLFSSGQIVQAKIIELDRAAFTARLSLRETVLRIP- 1179
Query: 926 YQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSA 985
Y+ DP + R+ ++E K+K + +R++ HP F+ + +A + L +
Sbjct: 1180 YRKNNYRDPGSWDLIQERKDKEELREKDKATGR---TQRVVKHPLFKPFNSTQAEEYLGS 1236
Query: 986 KEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED- 1044
+ PG+++IRPSS G +L +T KV DGVY H D++E K+++ +G+ L+IG
Sbjct: 1237 QAPGDAVIRPSSLGNDHLAVTWKVADGVYQHIDVVELDKENE-----FSVGRKLRIGNKY 1291
Query: 1045 TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISH 1104
+ DLDE++ ++ + + M+ + KF+ GSK+E + L P R Y F I H
Sbjct: 1292 NYSDLDELIVDHVKSMAKKVDEMMQHEKFQTGSKSETEAWLNSYTKANPKRAAYSFCIDH 1351
Query: 1105 EHPGTFILTYIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQRHI 1153
HPG F+L + + ++ + + PK ++ K + D+ L F+ I
Sbjct: 1352 RHPGYFLLCFKTGQDAPVKFWPVRIIPKAYELNKAPYPDMRALCNGFKMRI 1402
>gi|409082270|gb|EKM82628.1| hypothetical protein AGABI1DRAFT_34614 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1427
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 261/950 (27%), Positives = 452/950 (47%), Gaps = 77/950 (8%)
Query: 208 KRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK- 266
K P R + Y + ++A FG Q+ + ++D + P A F
Sbjct: 469 KMPSRISAYEVAKNTVVSKLAEGFGLEPYQVVANFIASERLYFVQDQELNPTIYAEQFAD 528
Query: 267 --CAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFH 324
+ + +L+ AR + + E+ +P +R ++R IF ++A ++ PT G ID H
Sbjct: 529 PDPVKVQTPEGLLRRARLILSTELGKDPQLRDHIRKIFKEDAQITVEPTERGIVKIDQNH 588
Query: 325 QFAGVKWLREKPLRK-FEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ K+L KP+R E AQ+L I AE E L+ V+I LP + + SD
Sbjct: 589 PYNNFKYLLRKPIRDMLESAQFLHILAAEAEHLVTVSIFLPNELKADFEQKLSNAFSSDN 648
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+++A+ WN +R +++DA++ L+ K AR + + +L L +++V P
Sbjct: 649 FNEAARAWNIERNQVVQDAIEQHLILLGAKWAREYLREEVEDFLAQSCAAKLRKRLNVAP 708
Query: 444 YQRKDNDITPDEEA--APRVLACCWGPGKPE---TTFVMLDSSGEVVDVLFTGCLTLRSQ 498
Y IT +A VLA WG G P+ + V LD +G +R
Sbjct: 709 Y------ITSAMKAGDTSSVLAVSWGKGDPQKDAISIVFLDEAGR-----------MREH 751
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
D ++ + + + +P V+V+G +++ L + E+I + P G
Sbjct: 752 TKVDNLYDSDNVDEFIDLLKRRKPDVIVIGGFSMATLKLSQRVKEVIRGGNSQIP---GQ 808
Query: 559 E-----MDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
E + ++ ++Y + + R+Y++S ++++ G K V L RY Q+PL A L
Sbjct: 809 ESSWGQVTDVPVIYVYDDVARMYQHSHRAAEEFGGLSSTAKYCVGLARYTQSPLNEFAAL 868
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMI-EQVMVDVTNQVGLDINLAIHREWQFAPLQFI 672
GR+I + + L P +K ++ E+ +VD+TN+VG+DIN A+ + L F+
Sbjct: 869 ---GRDITAITFEEDDQHLVPVDKLLLVFERALVDITNKVGVDINRAVTDSYYQHLLPFV 925
Query: 673 SGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ- 730
GLGPRKA +L + + G + R F+ L K+F+NA FLR+ R + +
Sbjct: 926 CGLGPRKAQALVKKIGALGGTLVNRTQFINNSLLTTKIFMNASAFLRIAREDNEMRTFKN 985
Query: 731 ------FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDE--DALEMAIEHVRDRP 782
D LDDTRIHPE Y LA+++A + D E D++D+ + + + +
Sbjct: 986 RRDDGDAPDPLDDTRIHPEDYELARKMATDALELD-EEDIHDEHPSHVVTLIMNDADNEK 1044
Query: 783 DLLKTYLLDRHIK--EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
L++ L + I + + KR TL +IR EL+ + + R+ + P E M+SGET
Sbjct: 1045 KLMELNLDEFAISLYQANYDQKRHTLNVIRDELLKTYAEQRDAFLLPQDMEVVTMLSGET 1104
Query: 841 EDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGD---- 896
E TL G +V A V R A L+SG+ G++ + SD+ ++++ L +G
Sbjct: 1105 ERTLRHGLMVSAVVYRTARNMAFVRLDSGVEGVITSKSLSDN--NAQVESFLRKGQTISG 1162
Query: 897 ILTCKIKSIQKNRYQVFLVC-------RESEMRNNRYQHCQNLDPYYHEERSSRQSEQEK 949
I+ + I + + V L C R+ E+R R D YY R + +
Sbjct: 1163 IIIHRTIDITHDIFNVELSCQRQLLEERDDEIRKVRP------DIYYDAVREDKDRDMLN 1216
Query: 950 ARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKV 1009
+K E + R+I HP F N A +A L ++ G+ +IRPSS+G +L +T KV
Sbjct: 1217 RKKRAETDRSR---RVIKHPNFHNFKAAQAEVFLEKQQRGDVVIRPSSKGIDHLAVTWKV 1273
Query: 1010 YDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLS 1069
DG+Y H D+ + D S G+ + + T+ DLDE++ +I + ++ +++
Sbjct: 1274 DDGLYQHIDVTDSNAD----PSGQTTGQLIVDSKFTYADLDELIVNHIQAMARRVEELMA 1329
Query: 1070 YRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
+ KF++G + E+ L+ A P + +YGF ++ + PG F L ++ + N
Sbjct: 1330 HEKFKQGPEDELHLFLKNSLAANPAKSMYGFTLNRKKPGHFNLCFLANKN 1379
>gi|395333495|gb|EJF65872.1| transcription elongation factor SPT6 [Dichomitus squalens LYAD-421
SS1]
Length = 1568
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 285/1104 (25%), Positives = 506/1104 (45%), Gaps = 112/1104 (10%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L L +Q+ ++P+I M++++ + + +V + DD LW ++ +
Sbjct: 365 LRYLFVQEFEVPYIWMHKRDYISYFDANNPKLQVELLSLDD------------LWRVYTV 412
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS-ISKSLEAAETEREVD 185
+K+ L +R++AL + Y RL ++ + F++ + +E AE +
Sbjct: 413 GQKYRSLLERRAALDTLY--------------ARLGVSDEYFETEVRNRVETAEMAADSS 458
Query: 186 D---------VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
+ +K ++ F + VD ++K P R + Y K+ + ++A FG +
Sbjct: 459 EWLGMKYREQKKIKIDIQFHDDDEQVDTRKHKMPSRVSAYELAKKSVVSKLAEGFGIRAH 518
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFK---CAMFNSSQAVLQGARHMAAVEISCEPC 293
++ L + +E+ + P A F ++ +L AR + A E+ +P
Sbjct: 519 EVVLNFVSDHNTHFVEEQELNPLAYAEQFADPDATRAQPAEELLARARMIIATELGKDPL 578
Query: 294 VRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREK-PLRKFEDAQWLLIQKAE 352
+R+ +R+ F NA++S PT G + ID H + K+L K + AQ+L I AE
Sbjct: 579 LRQEIRTTFKGNALISVLPTERGVAKIDEHHPYFNFKYLYNKNAAEMLQSAQFLNILAAE 638
Query: 353 EEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
+ L+ V+I L D+ + + SD S +A+ WN++R ++++ LD LLP V
Sbjct: 639 ADHLVTVSITLRPDAKAAFERKLNDAFASDSFSDTARAWNEERSRVVQETLDQHLLPVGV 698
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPY----QRKDNDITPDEEAAPRVLACCWGP 468
K R + A+ +L + L +++ V PY RK + P V+A WG
Sbjct: 699 KWTREWIREEAEDYLARQCASVLRDRIDVAPYVGPSMRKGD--------TPSVMAVSWGK 750
Query: 469 GKPE---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
G P + V LD +G LR D +Q+ + +P V+
Sbjct: 751 GDPHKDTISIVFLDEAGR-----------LREHTKLDNLFGVENQDEFCDMIKRRRPDVI 799
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEE------------HPRDVGHEMDELSIVYGDESLP 573
+ +++ L I E++ + +P D ++Y + +
Sbjct: 800 AVAGFSIATLKLSRRIKELLSATQNDASGNGWGESNAPNPND----SPSTPVIYVHDEVA 855
Query: 574 RLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLT 633
R+Y++SR + ++ K V L RY+Q+PL A L G +I + L
Sbjct: 856 RIYQHSRRADEEFSALSPLSKYCVGLARYVQSPLNEYAAL---GADITAITFDEDYQQLV 912
Query: 634 PDEK-YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
P EK +E+V+VDV N+VG+DIN A+ + LQF++GLGPRKA L + + G
Sbjct: 913 PREKLLTAMERVLVDVVNKVGVDINRAVTDSYYQHLLQFVAGLGPRKAQVLVKKIASMGG 972
Query: 693 -IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ-------FIDLLDDTRIHPES 744
+ R FV L K+F+NA FLR+ + + + D LD TR+HPE
Sbjct: 973 NLINRGQFVKNGLLTTKIFLNASAFLRIVQDSEPKPAKNRHGEEIDVPDPLDSTRVHPED 1032
Query: 745 YGLAQELAKEVYNRDIEGDLNDDEDA-LEMAIEHVRDRPDLLKTYLLDRHIKEKKREN-- 801
Y L +++A + D E D++D+ + + I D L LD R N
Sbjct: 1033 YELGRKMATDALELD-EEDIHDEHPSHVVSVIMQDDDNEKKLDELNLDDFAVNMYRTNQD 1091
Query: 802 -KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQ 860
KR TL +IR EL+ + + R + P+ E M++GET TL G +V RV+
Sbjct: 1092 KKRHTLNVIREELLRPYGEKRRGFVLPTNWEVVTMLTGETPRTLRTGLIVSVQAVRVKDN 1151
Query: 861 RAICVLESGLAGMLMKEDYSDDWRDSELSDKLHE---GDILTCKIKSIQKNRYQVFLVCR 917
I L+SG+ G + K ++ K + G ++ K+ I ++ V L
Sbjct: 1152 FVIVRLDSGIEGTINKRYLTELGLPPPSVVKQGQTLSGVVMEVKL-DIPADQVTVELSAL 1210
Query: 918 ESEMR--NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVT 975
E+++ +++++ + D + H + + SE + +K E+ + R+I HP F N
Sbjct: 1211 EADVSGGDSQFRRVKQDDAWNHHQ-YEKDSEMQARKKRAEVDR---TRRVIKHPNFHNFN 1266
Query: 976 ADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGI 1035
+ +A + L ++ G+ +IRPSS+G ++L +T KV D +Y H D++E D VG
Sbjct: 1267 SQQAEQYLEKQQRGDVVIRPSSKGANHLAVTWKVDDKLYQHLDVVELNAD--PTGQTVG- 1323
Query: 1036 GKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTR 1095
K + G F DLDE++ ++ + ++ ++ + KF+ G++ ++ LR A P++
Sbjct: 1324 SKLIVDGTHQFSDLDELIVNHVQAMARKVEELMMHEKFKPGTEDDLHLFLRNFVAANPSK 1383
Query: 1096 IVYGFGISHEHPGTFILTYIRSTN 1119
YGF ++ + PG F L Y+ + N
Sbjct: 1384 SAYGFTLNRKRPGHFNLCYLANKN 1407
>gi|336473233|gb|EGO61393.1| hypothetical protein NEUTE1DRAFT_58699 [Neurospora tetrasperma FGSC
2508]
gi|350293494|gb|EGZ74579.1| transcription elongation factor spt-6 [Neurospora tetrasperma FGSC
2509]
Length = 1402
Score = 342 bits (878), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 297/1178 (25%), Positives = 540/1178 (45%), Gaps = 103/1178 (8%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RKA + +E+ WI N +L G + G + L+
Sbjct: 276 RKAFKNLQMTSDQFKEEARWISNLMLPSKNLSSELHGPFNKAVG-----------KVLEF 324
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERT---PTLKWHKVLWAIHDL 126
+ +++P++ +R++ + K +N D+ D E T L LW + DL
Sbjct: 325 FVIDGVEVPYVFQHRRDYLIHAKK--MRNPNRRDDPDAPEYTVDAEKLLTQDDLWKVLDL 382
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D ++ ++++AL+ Y K E+ I +E + A++ E+ D
Sbjct: 383 DIRFRSFLEKRNALEQTYDKLKEKTRDDILEEM---------------IRQAQSIEELQD 427
Query: 187 VDLKFNLHFPP--GEVGVDEGQYKRP-----KRSTKYSSCSKAGLWEVASKFGYSSEQLG 239
+ N + ++ ++ +R R+ ++ ++ ++ G + ++L
Sbjct: 428 LQDYLNFQYSAELKDLAANDNSAQREIKRAGGRTAQFERIRRSNAYKFVQALGITPDRLA 487
Query: 240 LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR 299
+ E ED P+++A A F + + V+ AR M A E+ P +RK+ R
Sbjct: 488 KNILRESSKVTSEDDSRLPDDLADTLVDADFPTGELVINAARQMLAEEMFASPRMRKHFR 547
Query: 300 SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLL 357
F +VS T G ID + + VK+L+ + +L + KAEEE L+
Sbjct: 548 KNFYGMGIVSCRRTDKGLRKIDEANPYYEVKYLKNMSIADLAVRPELFLKMMKAEEEGLI 607
Query: 358 QVTIKLPEDS--LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
++ + L D +LFSD + S+ S+ A WN +R+ ++ A D L+ +VK
Sbjct: 608 EIKVSLENDREFRQQLFSD----FASENFSELADKWNAERQKVIDLAFDK-LVKVIVKGV 662
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE--- 472
+ + + LL + + ++ PY+ K I PRVL G G P
Sbjct: 663 KDSLRTACQDELLKTCRELYFKRLDQAPYKPKGMVIG----TTPRVLTLSNGMGDPNREP 718
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
++V +D G +++ G T N+ +S++ E L + + QP V+ + +
Sbjct: 719 VSWVSMDEDGRILE---HGTFT----NLARDESQR---EALAELVRRRQPDVIGISGFSA 768
Query: 533 SCTSLKDDIYEIIFK--MV---EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
L D+ ++ + +V + P + D L ++ ++ + RLY++S + P
Sbjct: 769 DTHRLIKDVEGLVSEKGLVGPEYDDPETNEYRSDLLEVIVINDEVARLYKDSPRAVADHP 828
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ +AL RY+QNP+ A L G+++ S ++ P + +L + +E MVD
Sbjct: 829 SLNPMTRYCIALARYMQNPMKEYAAL---GKDVTSLQIHPYQQYLPQAKLLKHLETAMVD 885
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG--- 704
+ N VG+DIN+A+ L +++GLGPRKA L + + + G + T +D +
Sbjct: 886 MVNLVGVDINVAMQDANTAHLLPYVAGLGPRKAQLLIKGINKNGGVVTSRDELVGDPERH 945
Query: 705 ----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
LG +V+ N FL + S D LD+TRIHPE Y LA+++A + D
Sbjct: 946 KLPVLGPRVWNNCASFLFIEYEPTNPES----DPLDNTRIHPEDYDLARKVAADALGLDE 1001
Query: 761 EG-DLNDDEDALEMAIEHV--RDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELI 814
E DE+ + + D D + +L+ + ++ +RE KR TL IR EL
Sbjct: 1002 EDVKAETDENGAGAIVRKLFKDDEQDKVNELILEEYAEQLEREYQQRKRATLETIRAELQ 1061
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+++ R +++ + D+ F M++GE D+L EG +V A VR V+ AI L+ G+ G +
Sbjct: 1062 VPYEELRKKFESLTVDQVFTMLTGENRDSLCEGMIVAANVRVVKDDFAIVKLDCGIEGRI 1121
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
D S +R S + D LH G ++ K+ + + + L R+ EMR +H +
Sbjct: 1122 ESHDVS--YRHS-IKDVLHVGQVVQAKLIDLNRKEFVSKLSMRDEEMRRPFRRHFDHGRD 1178
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ + R + +E K+K + +R++ HP F+ + +A + L ++ GE +IR
Sbjct: 1179 QW-DYRKEDEDREELREKDKSTGR---AQRVVNHPLFKPFNSTQAEEYLGSQPSGEVVIR 1234
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVD 1054
PSS+G +L +T KV DGV+ H D++E K+++ +G+ L++G+ T++DLDE++
Sbjct: 1235 PSSKGNDHLAVTWKVADGVFQHVDVLELQKENE-----FAVGRVLRVGKYTYQDLDELIV 1289
Query: 1055 RYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++ + + ++ KF+KGS+ E ++ L P R Y F I +HPG F L +
Sbjct: 1290 DHVKAMAKKVDELMQCDKFQKGSRNETEKWLTTYMDANPNRSTYAFCIDTKHPGYFFLCF 1349
Query: 1115 IRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
S N + + P F+ K + D+ L F+
Sbjct: 1350 KASRNSRVNAWPVRVIPHAFELMKSQYPDVRALCNGFK 1387
>gi|71003281|ref|XP_756321.1| hypothetical protein UM00174.1 [Ustilago maydis 521]
gi|74704957|sp|Q4PI89.1|SPT6_USTMA RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Chromatin elongation factor SPT6
gi|46096326|gb|EAK81559.1| hypothetical protein UM00174.1 [Ustilago maydis 521]
Length = 1723
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 296/1091 (27%), Positives = 502/1091 (46%), Gaps = 92/1091 (8%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
+K+P +Y K L E+A KFG +S++L ++ DP+E+P + A F
Sbjct: 558 FKKPSLVGQYERNKKTVLAELAKKFGITSDELASNVTSHTRQYSPRDPEESPFKFAEQFT 617
Query: 267 CAMF--NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFH 324
+ + +S + L A+ M + EI +P +++ +R +F D A ++ PT G + ID H
Sbjct: 618 GSAWGAHSPEIALAKAKMMLSQEIGKDPILKREMRQLFKDAAEINIEPTERGMTVIDDQH 677
Query: 325 QFAGVKWLREKPLRKFED--AQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSD 382
+A K++ KP R +Q+L + +AE+E L+++ I L + L + + +Y S+
Sbjct: 678 PYANFKFIANKPARLVPQNPSQYLQMLQAEDELLIKLDIDLKDVVLTRFEARLYNNYASE 737
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
GV + + WN+QR ++++AL L+P+ + + ++ LL + +V G
Sbjct: 738 GVGELSNAWNEQRRDVIREALKTHLVPNGRIWLKEFLREESRETLLRHVDVLMTKRVQEG 797
Query: 443 PYQ------RKDNDITPDEEAAPRVLACCWGPGKPETTFVM---LDSSGEVVDVLFTGCL 493
P+ R + +E+ PRVLA G G P V LD G +
Sbjct: 798 PFMSKSMMARNRDPKIEEEDRIPRVLAVSHGGGDPRKDVVQAVYLDERGRFRE--HATFD 855
Query: 494 TLRSQNVRDQQSKKNDQER-------------LLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
LR + R Q ++ + ER +K + +P +VV+ ++ LK
Sbjct: 856 DLRPLSARQMQERELELERTRGKAEFVDHRADFVKLLKQRRPDIVVVSGWSVRTAELKRH 915
Query: 541 IYEIIFKMVEE-------HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
+ E+ +E H D+ + + +V + + R+Y++S ++++ P
Sbjct: 916 VQELADTAHQEICDADRLHS-DLERDQAVIDVVTCHDDVARIYQHSSRAAEEFPELSELG 974
Query: 594 KRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVG 653
+ +AL RY Q+P+ A L G ++ + L P + L D E+ + V N+ G
Sbjct: 975 RYCLALARYAQSPVNEFAAL---GSDLTAVILDPNQRLLPQDRLRLHFERCIGAVVNENG 1031
Query: 654 LDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA--GAIFTRKDFVTAHGLGKKVFV 711
++IN A+ + L F++GLGPRKA +L ++ G + R ++ + L +VF
Sbjct: 1032 VEINQAMTSTYLQTMLPFVAGLGPRKAHALVNAISTKLEGTLINRTLLISRNILTFQVFQ 1091
Query: 712 NAVGFLRVRRSGQ-AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA 770
N FLR+ + A D+LD TRIHPE Y +++A + N+ E DL + +
Sbjct: 1092 NCASFLRIEQDMLLEADEDDVPDVLDSTRIHPEDYDFPRKMAADALNKH-EEDLEGEHPS 1150
Query: 771 LEMA-IEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKE 826
L + D D L T LD + + E+K E KR TL+ R ELI + D R + E
Sbjct: 1151 LPCKELMEDADPADKLNTLDLDNYATMLFERKGERKRATLHSCRTELIKPYDDLREKQSE 1210
Query: 827 PSQDEEFYMISGETEDTLAEGRVVQATVRRVQ-GQRA-----ICVLESGLAGMLMKEDYS 880
PS +E M +GET TLAEG VV V RVQ G R C L+SG+ G + E
Sbjct: 1211 PSLEEMLTMFTGETSKTLAEGFVVSVEVTRVQEGNRMQEGHIKCRLDSGIEGTIEAEHAV 1270
Query: 881 DDWR--DSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN-RYQHCQNLDPYYH 937
+ + L D + L ++ I V L E+++ +Q +D ++
Sbjct: 1271 EHYTPGSVRLRDLVRPQQTLDALVRKIDYKMCTVQLSISPWELQHRATHQGKTPIDIKFY 1330
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSS 997
+ R + Q + A K K + + R+I HP + N A+ L ++ G ++RPSS
Sbjct: 1331 DRRKADQWNEHAAAKAKLRIQARRQNRVIDHPNYHNFNYKAAVTFLRSQPRGTVVVRPSS 1390
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRY 1056
+G +L +T KV D VY + D+ E D +S +G+ L+I G ++ DLDE++ +
Sbjct: 1391 KGDDHLAVTWKVDDDVYQNIDVTE-----LDKESEYSLGRVLRIEGMGSYSDLDELIVNH 1445
Query: 1057 IDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIR 1116
+ P+V ++ M+++ K++ + ++ L P+R VY FG++ + PG F L++
Sbjct: 1446 VKPMVHMVEMMMNHEKYKGADEEDLHRFLTNWSLANPSRSVYAFGLNKDRPGYFNLSFKA 1505
Query: 1117 STNPHHEY--IGLYPKGFKF-RKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPM 1173
+ + + + + P FK D+ L F+ Q + S+ A
Sbjct: 1506 NRDAAIQTWPVKVLPNAFKLGPADQLADVAALCNAFK-----TQYTTQASMARGA----- 1555
Query: 1174 RSPANGGSTASAGSG----WGGSTNEGGWNRDR--SSTPGSRTGRNDYRNGGGRD----G 1223
++P GG T + G G GG T GG S+TPG GG
Sbjct: 1556 KTPYGGGRTPAPGMGGATPLGGRTPYGGVRNGMAGSATPGQGV-------AGGYTTPMIN 1608
Query: 1224 HPSGLPRPYGG 1234
S P PYGG
Sbjct: 1609 VASATPNPYGG 1619
>gi|85091340|ref|XP_958854.1| hypothetical protein NCU04611 [Neurospora crassa OR74A]
gi|28920242|gb|EAA29618.1| hypothetical protein NCU04611 [Neurospora crassa OR74A]
Length = 1407
Score = 342 bits (877), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 297/1178 (25%), Positives = 540/1178 (45%), Gaps = 103/1178 (8%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RKA + +E+ WI N +L G + G + L+
Sbjct: 281 RKAFKNLQMTSDQFKEEARWISNLMLPSKNLSSELHGPFNKAVG-----------KVLEF 329
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERT---PTLKWHKVLWAIHDL 126
+ +++P++ +R++ + K +N D+ D E T L LW + DL
Sbjct: 330 FVIDGVEVPYVFQHRRDYLIHAKK--MRNPNRRDDPDAPEYTVDAEKLLTQDDLWKVLDL 387
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D ++ ++++AL+ Y K E+ I +E + A++ E+ D
Sbjct: 388 DIRFRSFLEKRNALEQTYDKLKEKTRDDILEEM---------------IRQAQSIEELQD 432
Query: 187 VDLKFNLHFPP--GEVGVDEGQYKRP-----KRSTKYSSCSKAGLWEVASKFGYSSEQLG 239
+ N + ++ ++ +R R+ ++ ++ ++ G + ++L
Sbjct: 433 LQDYLNFQYSAELKDLAANDNSAQREIKRAGGRTAQFERIRRSNAYKFVQALGITPDRLA 492
Query: 240 LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR 299
+ E ED P+++A A F + + V+ AR M A E+ P +RK+ R
Sbjct: 493 KNILRESSKVTSEDDSRLPDDLADTLVDADFPTGELVINAARQMLAEEMFASPRMRKHFR 552
Query: 300 SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLL 357
F +VS T G ID + + VK+L+ + +L + KAEEE L+
Sbjct: 553 KNFYGMGIVSCRRTDKGLRKIDEANPYYEVKYLKNMSIADLAVRPELFLKMMKAEEEGLI 612
Query: 358 QVTIKLPEDS--LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
++ + L D +LFSD + S+ S+ A WN +R+ ++ A D L+ +VK
Sbjct: 613 EIKVSLENDREFRQQLFSD----FASENFSELADKWNAERQKVIDLAFDK-LVKVIVKGV 667
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE--- 472
+ + + LL + + ++ PY+ K I PRVL G G P
Sbjct: 668 KDSLRTACQDELLKTCRELYFKRLDQAPYKPKGMVIG----TTPRVLTLSNGMGDPNREP 723
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
++V +D G +++ G T N+ +S++ E L + + QP V+ + +
Sbjct: 724 VSWVSMDEDGRILE---HGTFT----NLARDESQR---EALAELVRRRQPDVIGISGFSA 773
Query: 533 SCTSLKDDIYEIIFK--MV---EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
L D+ ++ + +V + P + D L ++ ++ + RLY++S + P
Sbjct: 774 DTHRLIKDVEGLVSEKGLVGPEYDDPETNEYRSDLLEVIVINDEVARLYKDSPRAVADHP 833
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ +AL RY+QNP+ A L G+++ S ++ P + +L + +E MVD
Sbjct: 834 SLNPMTRYCIALARYMQNPMKEYAAL---GKDVTSLQIHPYQQYLPQAKLLKHLETAMVD 890
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG--- 704
+ N VG+DIN+A+ L +++GLGPRKA L + + + G + T +D +
Sbjct: 891 MVNLVGVDINVAMQDANTAHLLPYVAGLGPRKAQLLIKGINKNGGVVTSRDELVGDPERH 950
Query: 705 ----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
LG +V+ N FL + S D LD+TRIHPE Y LA+++A + D
Sbjct: 951 KLPVLGPRVWNNCASFLFIEYEPTNPES----DPLDNTRIHPEDYDLARKVAADALGLDE 1006
Query: 761 EG-DLNDDEDALEMAIEHV--RDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELI 814
E DE+ + + D D + +L+ + ++ +RE KR TL IR EL
Sbjct: 1007 EDVKAETDENGAGAIVRKLFKDDEQDKVNELILEEYAEQLEREYQQRKRATLETIRAELQ 1066
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+++ R +++ + D+ F M++GE D+L EG +V A VR V+ AI L+ G+ G +
Sbjct: 1067 VPYEELRKKFESLTVDQVFTMLTGENRDSLCEGMIVAANVRVVKDDFAIVKLDCGIEGRI 1126
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
D S +R S + D LH G ++ K+ + + + L R+ EMR +H +
Sbjct: 1127 ESHDVS--YRHS-IKDVLHVGQVVQAKLIDLNRKEFVSKLSMRDEEMRRPFRRHFDHGRD 1183
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ + R + +E K+K + +R++ HP F+ + +A + L ++ GE +IR
Sbjct: 1184 QW-DYRKEDEDREELREKDKSTGR---AQRVVNHPLFKPFNSTQAEEYLGSQPSGEVVIR 1239
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVD 1054
PSS+G +L +T KV DGV+ H D++E K+++ +G+ L++G+ T++DLDE++
Sbjct: 1240 PSSKGNDHLAVTWKVADGVFQHVDVLELQKENE-----FAVGRVLRVGKYTYQDLDELIV 1294
Query: 1055 RYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++ + + ++ KF+KGS+ E ++ L P R Y F I +HPG F L +
Sbjct: 1295 DHVKAMAKKVDELMQCDKFQKGSRNETEKWLTTYMDANPNRSTYAFCIDTKHPGYFFLCF 1354
Query: 1115 IRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
S N + + P F+ K + D+ L F+
Sbjct: 1355 KASRNSRVNAWPVRVIPHAFELMKSQYPDVRALCNGFK 1392
>gi|74629950|sp|Q8NIV6.1|SPT6_NEUCR RecName: Full=Transcription elongation factor spt-6; AltName:
Full=Chromatin elongation factor spt-6
gi|21622504|emb|CAD37051.1| related to transcriptional regulator protein SPT6 [Neurospora crassa]
Length = 1402
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 297/1178 (25%), Positives = 540/1178 (45%), Gaps = 103/1178 (8%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RKA + +E+ WI N +L G + G + L+
Sbjct: 276 RKAFKNLQMTSDQFKEEARWISNLMLPSKNLSSELHGPFNKAVG-----------KVLEF 324
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERT---PTLKWHKVLWAIHDL 126
+ +++P++ +R++ + K +N D+ D E T L LW + DL
Sbjct: 325 FVIDGVEVPYVFQHRRDYLIHAKK--MRNPNRRDDPDAPEYTVDAEKLLTQDDLWKVLDL 382
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D ++ ++++AL+ Y K E+ I +E + A++ E+ D
Sbjct: 383 DIRFRSFLEKRNALEQTYDKLKEKTRDDILEEM---------------IRQAQSIEELQD 427
Query: 187 VDLKFNLHFPP--GEVGVDEGQYKRP-----KRSTKYSSCSKAGLWEVASKFGYSSEQLG 239
+ N + ++ ++ +R R+ ++ ++ ++ G + ++L
Sbjct: 428 LQDYLNFQYSAELKDLAANDNSAQREIKRAGGRTAQFERIRRSNAYKFVQALGITPDRLA 487
Query: 240 LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR 299
+ E ED P+++A A F + + V+ AR M A E+ P +RK+ R
Sbjct: 488 KNILRESSKVTSEDDSRLPDDLADTLVDADFPTGELVINAARQMLAEEMFASPRMRKHFR 547
Query: 300 SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLL 357
F +VS T G ID + + VK+L+ + +L + KAEEE L+
Sbjct: 548 KNFYGMGIVSCRRTDKGLRKIDEANPYYEVKYLKNMSIADLAVRPELFLKMMKAEEEGLI 607
Query: 358 QVTIKLPEDS--LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
++ + L D +LFSD + S+ S+ A WN +R+ ++ A D L+ +VK
Sbjct: 608 EIKVSLENDREFRQQLFSD----FASENFSELADKWNAERQKVIDLAFDK-LVKVIVKGV 662
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE--- 472
+ + + LL + + ++ PY+ K I PRVL G G P
Sbjct: 663 KDSLRTACQDELLKTCRELYFKRLDQAPYKPKGMVIG----TTPRVLTLSNGMGDPNREP 718
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
++V +D G +++ G T N+ +S++ E L + + QP V+ + +
Sbjct: 719 VSWVSMDEDGRILE---HGTFT----NLARDESQR---EALAELVRRRQPDVIGISGFSA 768
Query: 533 SCTSLKDDIYEIIFK--MV---EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
L D+ ++ + +V + P + D L ++ ++ + RLY++S + P
Sbjct: 769 DTHRLIKDVEGLVSEKGLVGPEYDDPETNEYRSDLLEVIVINDEVARLYKDSPRAVADHP 828
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ +AL RY+QNP+ A L G+++ S ++ P + +L + +E MVD
Sbjct: 829 SLNPMTRYCIALARYMQNPMKEYAAL---GKDVTSLQIHPYQQYLPQAKLLKHLETAMVD 885
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG--- 704
+ N VG+DIN+A+ L +++GLGPRKA L + + + G + T +D +
Sbjct: 886 MVNLVGVDINVAMQDANTAHLLPYVAGLGPRKAQLLIKGINKNGGVVTSRDELVGDPERH 945
Query: 705 ----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
LG +V+ N FL + S D LD+TRIHPE Y LA+++A + D
Sbjct: 946 KLPVLGPRVWNNCASFLFIEYEPTNPES----DPLDNTRIHPEDYDLARKVAADALGLDE 1001
Query: 761 EG-DLNDDEDALEMAIEHV--RDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELI 814
E DE+ + + D D + +L+ + ++ +RE KR TL IR EL
Sbjct: 1002 EDVKAETDENGAGAIVRKLFKDDEQDKVNELILEEYAEQLEREYQQRKRATLETIRAELQ 1061
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+++ R +++ + D+ F M++GE D+L EG +V A VR V+ AI L+ G+ G +
Sbjct: 1062 VPYEELRKKFESLTVDQVFTMLTGENRDSLCEGMIVAANVRVVKDDFAIVKLDCGIEGRI 1121
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
D S +R S + D LH G ++ K+ + + + L R+ EMR +H +
Sbjct: 1122 ESHDVS--YRHS-IKDVLHVGQVVQAKLIDLNRKEFVSKLSMRDEEMRRPFRRHFDHGRD 1178
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ + R + +E K+K + +R++ HP F+ + +A + L ++ GE +IR
Sbjct: 1179 QW-DYRKEDEDREELREKDKSTGR---AQRVVNHPLFKPFNSTQAEEYLGSQPSGEVVIR 1234
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVD 1054
PSS+G +L +T KV DGV+ H D++E K+++ +G+ L++G+ T++DLDE++
Sbjct: 1235 PSSKGNDHLAVTWKVADGVFQHVDVLELQKENE-----FAVGRVLRVGKYTYQDLDELIV 1289
Query: 1055 RYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++ + + ++ KF+KGS+ E ++ L P R Y F I +HPG F L +
Sbjct: 1290 DHVKAMAKKVDELMQCDKFQKGSRNETEKWLTTYMDANPNRSTYAFCIDTKHPGYFFLCF 1349
Query: 1115 IRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
S N + + P F+ K + D+ L F+
Sbjct: 1350 KASRNSRVNAWPVRVIPHAFELMKSQYPDVRALCNGFK 1387
>gi|392595810|gb|EIW85133.1| transcription elongation factor Spt6 [Coniophora puteana RWD-64-598
SS2]
Length = 1473
Score = 340 bits (873), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 279/1044 (26%), Positives = 492/1044 (47%), Gaps = 80/1044 (7%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I+ L +K+ + +RK AL Y++ ++ Y E + + ++ + E
Sbjct: 365 LWRIYALGQKYRSMVERKQALSVAYQRLGVQDD---YFEQNITPKVDSVEVVADATEWLS 421
Query: 180 TEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK-FGYSSEQL 238
+V D LHF + + + K P R + Y K ++A + FG + ++
Sbjct: 422 MRYKVQKKD-ALELHFHDDDEQPEGRKRKAPSRLSAYEVAKKTIASKLAEQGFGIKAHEV 480
Query: 239 GLQLSLEKMGDELEDPKETPEEMASNF----KCAMFNSSQAVLQGARHMAAVEISCEPCV 294
L +ED P A F + + + +L+ AR + + E+ +P +
Sbjct: 481 VLNFVSSNQTHFVEDQDLNPIAFAERFTEPEQGIAYAGPEELLRRARMILSTELGKDPIL 540
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA-QWLLIQKAEE 353
R+ +R +F A +S PT G S +D H + K+L K + D+ Q+L I AE
Sbjct: 541 RQEIRELFKHEAEISVLPTERGLSKVDEHHTYFNFKYLSHKSIGLMLDSPQFLNILAAEA 600
Query: 354 EKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVK 413
E L+ V+I LP D + + + SD S +A+ WN +R ++ +A++ LLP K
Sbjct: 601 ELLVNVSIVLPNDVKARFERRLMDAFSSDSYSDTAKAWNAERSRVVTEAMEQHLLPVGAK 660
Query: 414 EARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE- 472
AR + + L + G L +++ + P+ D+ P + + VLA WG G P+
Sbjct: 661 WAREWLREEVEDALALHCGNELKSRIDIAPFCTA--DMQPGDTCS--VLAMSWGKGDPQK 716
Query: 473 --TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAV 530
T V LD +G LR D ++ ++ L + +P V+V+G
Sbjct: 717 DAITMVFLDEAGR-----------LREHTKIDNLVDEDYRDEFLDILKRRRPDVIVIGGF 765
Query: 531 NLSCTSLKDDIYEIIF--KMVEEHPRDV----------GHEMDELSIVYGDESLPRLYEN 578
+++ T L + +I+ + E P D + + ++Y ++ + R+Y++
Sbjct: 766 SMATTKLSSRVKDIVHGRRQQEGPPTDAWSQPQAPAPPNEQAFNIPVIYVNDEVARIYQH 825
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKY 638
SR ++++ K + L RY+QNPL A + G +I + L L P EK
Sbjct: 826 SRRAAEEFSALSSIAKYCIGLSRYVQNPLNEYAAM---GSDITAIALEEEHQNLVPKEKL 882
Query: 639 GM-IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTR 696
+E+ +VD+TN+VG+DIN A++ + L F+ GLGPRKA L + + G + R
Sbjct: 883 LFALERAIVDITNKVGVDINRAVNESYYQHLLPFVCGLGPRKAQVLVKKIAAMGGNLVNR 942
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRR-------SGQAASSSQFIDLLDDTRIHPESYGLAQ 749
+ F+ A L K+F+NA GFLR+ G+ A D LDDTRIHPE Y LA+
Sbjct: 943 EQFIKASLLTTKIFLNAAGFLRITNDPDMKPAKGRLADDDV-QDPLDDTRIHPEDYELAR 1001
Query: 750 ELAKEVYNRDIEGDLNDDEDALEMA-IEHVRDRPDLLKTYLLDR---HIKEKKRENKRET 805
++A + D E D++D+ + ++ I D L LD ++ E + KR T
Sbjct: 1002 KMATDALELD-EEDIHDEHPSHVVSLIMRDEDNEKKLNDLNLDEFAVNMYEANEDRKRHT 1060
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV 865
L +IR+EL+ F + R + + + M+SGET+ TL G ++ V R+
Sbjct: 1061 LNVIRQELLRSFAEQRGPFPLMKEWDVLTMLSGETQRTLRMGFIISVLVVRLTANFVSVR 1120
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN----RYQVFLVCRESEM 921
L+SG+ G++ E Y + + L +G + + ++ N ++ V L R+S++
Sbjct: 1121 LDSGIEGVINIE-YVTEEGNIHPDKVLKKGQTIAGVVVDVKLNLDADQFYVELSARKSDL 1179
Query: 922 RN-----NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTA 976
+ R +H ++ + +E Q +++A ++ R+I HP F N A
Sbjct: 1180 NSGDAIFRRVKHDEDWNKTQYERDVEMQVRKKRAEVDR-------TRRVIKHPNFHNFNA 1232
Query: 977 DEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIG 1036
+A L ++ G+ +IRPSS+G +L +T KV D +Y H D+ E D S G+G
Sbjct: 1233 SQAEVYLDKQQRGDVVIRPSSKGIDHLAVTWKVEDKLYQHIDVTEINPD----PSGQGLG 1288
Query: 1037 KTLKIGE-DTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTR 1095
L + E + DLDE++ ++ ++ ++++ KF+ G + E+ L+ A P++
Sbjct: 1289 TLLVVDERHQYADLDELIVNHVQATARKVEELMAHEKFKHGPEDELHHFLKNFVAANPSK 1348
Query: 1096 IVYGFGISHEHPGTFILTYIRSTN 1119
+YGF ++ PG F L ++ + N
Sbjct: 1349 SIYGFTLNRRKPGHFNLCFLANKN 1372
>gi|296417146|ref|XP_002838222.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634144|emb|CAZ82413.1| unnamed protein product [Tuber melanosporum]
Length = 1419
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 289/1128 (25%), Positives = 519/1128 (46%), Gaps = 109/1128 (9%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I L+ + ++++++PFI +RK+ + + + + + + E T L LW
Sbjct: 347 IRSVLEFIVIEQMEVPFIYQHRKDYLIHTERVPTRRHNDGETGYEIEATKLLTQDD-LWE 405
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
I +LD K+ + A + R Y ++ + L+ ET
Sbjct: 406 ILELDLKFRAFLDKCRAYE------------RTYSNLKIVTDTSDDMEAETGLQRTETIE 453
Query: 183 EVDDVD--LKFNLHFPPGEVGVDEGQ-----YKRPKRS-TKYSSCSKAGLWEVASKFGYS 234
++ D+ + F H ++ + G+ Y+RP S T Y ++ + FG S
Sbjct: 454 QIQDLHDYIHFRYHSQLKDMAITNGEGRGNGYRRPGSSKTIYERIRNGKVYGMVRAFGLS 513
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNF-KCAMFNSSQAVLQGARHMAAVEISCEPC 293
+ Q + + ++ + EDP P ++ + F + ++VLQ A+ M A E+ P
Sbjct: 514 AAQFAMNVRFDQKREYAEDPHNYPHAISDQYIDDPEFPTGESVLQAAKLMLAEELFTNPT 573
Query: 294 VRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEE 353
+R+ +R + + T G ID HQ+ + A +L + KAE+
Sbjct: 574 LRRSMRDKWFTRGTIHVNVTEKGVRQIDEQHQYYSIA---------VHPAMYLRMMKAEQ 624
Query: 354 EKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVK 413
E + V + L +S +K E+ S+ VS A+ WN +R+ ++ A+ F L K
Sbjct: 625 EGYVNVDVNL--ESEDKFTRRLYEYMTSENVSDIAESWNKERKEVVDMAMGKFKL-MFQK 681
Query: 414 EARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PGK 470
+ + + + + ++ K+ PY+ K + PRV A G G+
Sbjct: 682 AIKDELRTACEDSIAADCRRSYLKKLDQAPYKPKALKLG----EIPRVFAFSNGYGERGR 737
Query: 471 PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAV 530
V D G +++ T++ +++D S+ N ++ + +P V+ +
Sbjct: 738 DAIVGVFRDEDGRLLE-------TVKFTDLKDDTSRTN----FIEVLNRRKPDVIAVAGF 786
Query: 531 NLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS---IVYGDESLPRLYENSRISSDQLP 587
++ L ++I I+ EE VG E+D+ S ++ ++ + RLY+NS ++ P
Sbjct: 787 SVQTHKLVEEIRGIV---EEEDINVVGDEVDDRSPTEVMLVNDEVARLYQNSDRAALDHP 843
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ VAL +Y+QNPL A L G++I+S P + L + +E MVD
Sbjct: 844 ELPPLSRYCVALAKYVQNPLLEYAAL---GKDIVSIAFHPAQQLLPEHKLQKALETAMVD 900
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG-- 704
+ N VG+D+N A + + LQ++ G GPRKA S+ + + G + +R + +
Sbjct: 901 MVNLVGVDLNEAASKPYVANLLQYVCGFGPRKAVSVMKVVQANGGRVSSRLELLGDRDRG 960
Query: 705 ----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
+G VF+N FL + +S D LD+TR+HPE Y L +++A + DI
Sbjct: 961 FLPVVGPMVFINCASFLIIPHDPADRNS----DYLDNTRVHPEDYDLGRKMAADAL--DI 1014
Query: 761 EGDLNDDEDALEMAIEH---------VRDRPDLLKTYLLDRHIKEKKR---ENKRETLYL 808
D+ED M E + + + + L+ + +E +R + KR TL
Sbjct: 1015 -----DEEDVATMVTEGGAGAVINELINGQDEKVNELSLEDYAEELERNFNQKKRATLET 1069
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLES 868
IR EL H +++ RN+Y++ S DE F M++GET++TLA G VV +RRV + L
Sbjct: 1070 IRAELQHAYEELRNKYQKLSTDEIFTMLTGETKETLAAGMVVPVAIRRVTDRYCAVRLAC 1129
Query: 869 GLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQH 928
G+ G + ++ D ++ H G + +I+ + + + L RE ++RN +
Sbjct: 1130 GIDGNVSLDEMHDGSSHFLPTNFYHVGQTVQARIEKLNEETFFSELSFREDKIRNPLVKR 1189
Query: 929 CQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEP 988
+ L + + R E++KAR ++ R+I HP F+ + +A + L+ +
Sbjct: 1190 IEFLPDEWDDVRE----ERDKARLSVVNQEQTRTARVIKHPLFKPYNSRQAQEFLAGQSR 1245
Query: 989 GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFE 1047
G++IIRPSS GP ++ +T KV DG+Y H D++E KD++ +GKTLK+ G+ ++
Sbjct: 1246 GDAIIRPSSNGPDHIAVTWKVSDGIYQHIDVLELDKDNE-----FTVGKTLKVSGKFSYS 1300
Query: 1048 DLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
DLDE++ ++ + + + + KF +G+KAE ++ L P R +YGF + P
Sbjct: 1301 DLDELIVTHVKAMAKKVDELSHHSKFIQGTKAEAEKWLEKYCEANPKRSMYGFCFDTQRP 1360
Query: 1108 GTFILTYIRSTNPHHEYIG-----LYPKGFKFRKRMFEDIDRLVAYFQ 1150
G F L Y N IG + P F+ R F D+ L F+
Sbjct: 1361 GYFHLLYKAGANAR---IGSWPVKIIPHAFQLRDTPFPDVMTLCNGFK 1405
>gi|156043573|ref|XP_001588343.1| hypothetical protein SS1G_10790 [Sclerotinia sclerotiorum 1980]
gi|154695177|gb|EDN94915.1| hypothetical protein SS1G_10790 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1408
Score = 337 bits (864), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 291/1127 (25%), Positives = 537/1127 (47%), Gaps = 89/1127 (7%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP-TLKWHKVLW 121
I + L+ + ++++P++ +RK+ + K +++ NN + D+E T L LW
Sbjct: 327 ISKVLEFFVVDEVEVPYVFQHRKDYLIHARKSKTRSDPNNPDGPDYEVTADKLLNQDDLW 386
Query: 122 AIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLA--LNQQLFDSISKSLEAAE 179
I +LD K+ L +++ L+ + YD +LA ++ F+ + + + E
Sbjct: 387 RILELDLKFRALIDKRNVLE------------KTYDNLKLAASISDATFEQMIPNAQTME 434
Query: 180 TEREVDDVDLKFNLHFPPGEVGVDEGQYKRPK---RSTKYSSCSKAGLWEVASKFGYSSE 236
+++ D L F + G+ K + +++++ K+G +++ +G +++
Sbjct: 435 ELQDIQDY-LYFQYSSEIKSLQGSNGEVKEKRAGNKASRFDRIRKSGAYQLVRAYGITAD 493
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAM-FNSSQAVLQGARHMAAVEISCEPCVR 295
++ L LE EDP P ++A + F + +AVL AR + A E+ P +R
Sbjct: 494 EIAGNLLLEGRKKYTEDPPLNPIDLADTLTSSDDFTTGEAVLNAARSLYAEELFMSPKMR 553
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEE 353
++ R +VS T G ID H + +K+L+ + + +L + KAEE
Sbjct: 554 QHFRKHHYMGGLVSCARTDKGLKKIDEQHPYYELKYLKNQTFSDIASKPEMFLKMLKAEE 613
Query: 354 EKLLQVTIKLPE--DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
E LL+V + L D ++F + + SD S+ A WND+R+ +L A L ++
Sbjct: 614 EGLLEVRVSLQNERDFRRQIFGE----FRSDNYSEVADAWNDERQKVLDMAFTK-LERTI 668
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---P 468
K + M + +L + K+ PY+ K + PRVLA G P
Sbjct: 669 TKGVKESMRTECQDSILKVCREEYSRKLDQAPYKPKGMVLG----TIPRVLALSNGNGDP 724
Query: 469 GKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG 528
G+ + ++ G V+D L+ RD +++ E ++ + +P V+ +
Sbjct: 725 GRDAVCWAYVEEDGRVLDHGKFDNLS------RDHRAR----EAFVELVRSKKPDVLGIS 774
Query: 529 AVNLS----CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSD 584
++ SLK+ + E + E + + L I+ ++ + RLY++S ++
Sbjct: 775 GFSVETHKLVLSLKELVQEHSLRGNEFEDENGEERTEPLDIIVVNDEVARLYKDSPRAAV 834
Query: 585 QLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQV 644
P + V L +Y+QNP+ A L G++I+S P + L D+ +E
Sbjct: 835 DHPAFAPLARYCVGLAKYIQNPMKEYAAL---GKDIVSLSFHPCQQLLPEDKLRRQLETA 891
Query: 645 MVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV--- 700
MVD+ N G++IN A++ + L FI GLGPRKA ++ +S+ G + TR++ V
Sbjct: 892 MVDMVNLCGVNINEAVNDAYTANLLPFICGLGPRKATAVLKSINANGGVVNTREELVGDP 951
Query: 701 ---TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYN 757
+G +V+ N FL + +S D LD+TR+HPE Y L +++A +
Sbjct: 952 DNNKLPVVGPRVWNNCASFLYMEYDSANPAS----DYLDNTRVHPEDYELGRKMAADALE 1007
Query: 758 RDIEGDLNDDEDALEMAIEHVR-----DRPDLLKTYLLDRHIKEKKR---ENKRETLYLI 809
D E + ++ AI VR D + + +L+ + + +R + KR TL I
Sbjct: 1008 LDEEDVKAEVDEGGPGAI--VRKLIKDDEQEKVNDLILEEYADQLERNYNQRKRATLETI 1065
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
R EL+ +++ R + D+ F M++GET ++L EG +V +R + I L+SG
Sbjct: 1066 RAELLQPYEELRRNFGILLDDDIFTMLTGETHESLCEGMIVSVNIRVAKDDFIIAKLDSG 1125
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
+ G + K+D SD+ ++ L G K+ + + + L RES+MR R +
Sbjct: 1126 IEGRVEKDDGSDN-PNASLHRLFSVGQTAQAKLLDVDRRNFAARLSFRESQMRPYRKRID 1184
Query: 930 QNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPG 989
+++ + + Q ++E+ R EK+ A +R++ HP F+ A +A + L ++ PG
Sbjct: 1185 RDIGTW---DSLQEQKDREELR-EKDKATGRV-QRVVKHPLFRPFNATQAEEYLGSQAPG 1239
Query: 990 ESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED-TFED 1048
+++IRPSS+G +L +T KV DGVY H D++E K+++ +G+ L+IG + D
Sbjct: 1240 DAVIRPSSKGNDHLAVTWKVADGVYQHLDVLELQKENE-----FSVGRQLRIGNKYNYSD 1294
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG 1108
LDE++ ++ + ++ M+ + KF+KGS+A+ + L P R VY F + HPG
Sbjct: 1295 LDELIVDHVKAMSKKVEEMMLHEKFQKGSRADTERWLTTYTEANPKRSVYAFCLDTRHPG 1354
Query: 1109 TFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ-RH 1152
F L + + + + + P F+ K + D+ L F+ RH
Sbjct: 1355 YFHLCFKAGQQARVNSWAVRVVPNAFELLKSPYPDMKALCNGFKLRH 1401
>gi|340923605|gb|EGS18508.1| hypothetical protein CTHT_0051100 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1415
Score = 336 bits (861), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 307/1183 (25%), Positives = 533/1183 (45%), Gaps = 112/1183 (9%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RK PT E +E+ WI N + G + G + L+
Sbjct: 285 RKPFKEQPTSAEYFKEEARWITNLIWPKKNLRADLHGPFNKAVG-----------KVLEF 333
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVL-----WAIH 124
+ +++P+I +R++ + K +N+ +N ++ ++ TL K+L W I
Sbjct: 334 FIIDGVEVPYIFQHRRDYLIHARKI--RNKSDNPDSQEY----TLDAEKLLNQDDLWRIL 387
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSI-SKSLEAAETERE 183
+LD K+ L +++++L+ Y L + DSI + + A T E
Sbjct: 388 ELDLKFRSLVEKRNSLEKAY--------------NNLKEGAGIQDSILDEMIHQAATIEE 433
Query: 184 VDDVDLKFNLHFPPGEVGV------DEGQYKRPKRSTKY-SSCSKAGLWEVASKFGYSSE 236
+ D+ N + + + + KRP T + ++ +E G S +
Sbjct: 434 LQDLQDYLNFQYSSQIKAIAAAGNGETREIKRPGAKTAFFERIRRSKAYEFVKALGISPD 493
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
+L E +DP + P E+A + F S+ V+ AR M A E+ P +RK
Sbjct: 494 RLAQNALREGKKVSSDDPSQRPVELADSLCDLEFPSADQVINAARQMYAEEMFVSPRMRK 553
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEE 354
+ R + VS T G ID H + +K+L + +R +L + KAEEE
Sbjct: 554 HFRIQYYQMGSVSCRRTEKGLRKIDESHPYYEIKYLLNQTIRDLAMRPEIFLKMMKAEEE 613
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
L++V + L ++ + ++SD S+ A WN +R+ +L A L + K
Sbjct: 614 GLVEVRLSL--ENEREFRKQLYNEFISDNFSELADAWNAERQKVLDLAFGK-LEKVIAKG 670
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE-- 472
+ + + LL + + ++ P + K + PRVL G G P
Sbjct: 671 VKDSLRTACQEELLKTCREEYFKRLDQAPLKPKGMVLG----TTPRVLTLTNGMGDPNRD 726
Query: 473 -TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN 531
+ ++ G +V+ + L RD+ N +E + P + + +
Sbjct: 727 PIYWTWVEEDGRIVE--HGKFVNL----ARDE----NQREAFAELCRRRHPDAIGVSGFS 776
Query: 532 LSCTSLKDDIYEIIFK---MVEEH--PRDVGHEMDELSIVYGDESLPRLYENSRISSDQL 586
+ L DI II + M E+ P + D L ++ ++ + RLY++S + +
Sbjct: 777 VDTHRLIKDIEGIINEKGLMGPEYQDPDSDEYRSDLLDVIIVNDEVARLYKDSPRAQQEH 836
Query: 587 PGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMV 646
P + AL RY+QNP+ A L G++++S ++ P + +L D+ +E MV
Sbjct: 837 PTLNPLTRYCYALARYMQNPMKEYAAL---GKDVVSLRIHPYQQYLPQDKLLKAMETAMV 893
Query: 647 DVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG-- 704
D+ N VG+DIN A++ + L +++GLGPRKA L + + G + T +D +
Sbjct: 894 DIVNLVGVDINEAMNDPYTANLLPYVAGLGPRKAQLLIKGINANGGVVTSRDELVGDPER 953
Query: 705 -----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY--- 756
LG +V+ N FL + + SS+ D LD+TRIHPE Y LA+++A +
Sbjct: 954 HKIPVLGPRVWNNCASFLYI----EYDSSNPESDPLDNTRIHPEDYDLARKVAADALGLD 1009
Query: 757 NRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRREL 813
D++ + ++ ++ + D + +LD + + +RE KR TL IR EL
Sbjct: 1010 EEDVKAETDEHGPGAIVSKLFREEEQDKVNELILDEYADQLEREYQQRKRATLEAIRAEL 1069
Query: 814 IHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGM 873
+ F++ R + PS D+ F M +GET D+L EG +V VR V+ AI L+ G+ G
Sbjct: 1070 VGPFEELRKGFAIPSTDQIFTMFTGETRDSLCEGMIVPVNVRVVKDDFAIVRLDCGIEGR 1129
Query: 874 LMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLD 933
+ + S +R S + D L + KI I + + L RE E+R +H
Sbjct: 1130 IEAHEVS--YRHS-IKDLLSVNQTVQAKILDINRKDFTCKLSLREEELRRPFRRH----- 1181
Query: 934 PYYHEERSSRQSEQEKARKEKELAKKHF---KERLIVHPCFQNVTADEAMKLLSAKEPGE 990
Y R +QE +E+ K +R+I HP F+ + +A + L PGE
Sbjct: 1182 --YDYGRGQWDYKQEDLDREELREKDKVTGRTQRVIRHPLFKPFNSVQAEEYLGGMPPGE 1239
Query: 991 SIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED-TFEDL 1049
+IRPSS+G +L +T KV DGVY H D++E KD++ +GK L++G T+ DL
Sbjct: 1240 VVIRPSSKGNDHLAVTWKVADGVYQHIDVLELQKDNE-----FSVGKVLRVGSKYTYSDL 1294
Query: 1050 DEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
DE++ ++ + ++ M+ + KF+KGS+A++++ L P R Y F I +HPG
Sbjct: 1295 DELIVEHVKAMAKKVEEMMQHEKFQKGSRADLEKWLTTYIDANPNRSTYAFCIDPKHPGY 1354
Query: 1110 FILTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
F L + R++ + + + P F+ K + D+ L F+
Sbjct: 1355 FYLCFKASRTSRVNAWMVRVVPHAFEMMKSQYPDMRALCNGFK 1397
>gi|336364889|gb|EGN93242.1| hypothetical protein SERLA73DRAFT_126732 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377466|gb|EGO18628.1| hypothetical protein SERLADRAFT_375040 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1414
Score = 333 bits (853), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 267/1036 (25%), Positives = 491/1036 (47%), Gaps = 75/1036 (7%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I+ L +K+ L +R++AL S Y R E + + R ++ + ++ + E
Sbjct: 375 LWRIYTLGQKYRSLVERRNALASLYA-RLGVEDQYFTEHIRAKIDS--VEVVADATEWLA 431
Query: 180 TEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLG 239
+ + D ++ HF + + + K P R++ Y K+ + ++A FG ++
Sbjct: 432 MKYKAKKQD-TYDFHFHDDDEHHETKKRKIPSRTSAYEVAKKSVVSKLADGFGIRPHEIA 490
Query: 240 LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQA---VLQGARHMAAVEISCEPCVRK 296
++D + P A F + Q +L+ AR + A E+ +P +R+
Sbjct: 491 QNFMNGDHAHFVDDQELNPVAYAEQFMDPEVTNDQPPEELLRRARMILATEVGKDPLLRQ 550
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED-AQWLLIQKAEEEK 355
+R +F ++A +S PT G + ID H + K+L K + + D +Q+L I AE +
Sbjct: 551 EMRMMFKNDAQISVLPTERGVNKIDEHHPYFNFKYLYHKNINQMLDTSQFLHIIAAEADH 610
Query: 356 LLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
L+ V+I LP ++ + + + SD S +A+ WN++R ++++ ++N L+P VK A
Sbjct: 611 LVTVSIFLPSEAKAQFERRLNDAFASDSYSDTAKSWNEERARVVQETMENHLIPVGVKWA 670
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE--- 472
R + + L G L +++ V P+ D + P + A+ VLA WG G P+
Sbjct: 671 REWVREEVEDALANRCGGILKDRIDVAPFITAD--MRPGDTAS--VLAMSWGKGDPQKDA 726
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
T V LD +G LR D ++ + + +P V+ + ++
Sbjct: 727 ITVVFLDEAGR-----------LREHTKIDNLVDTETRDEFVDLLRRRRPDVIAISGFSM 775
Query: 533 SCTSLKDDIYEIIFKMVEEH----------PRDVGHEMDELSIVYGDESLPRLYENSRIS 582
+ T L + +I+ ++ P+D + + ++Y + + R+Y++S+ +
Sbjct: 776 ATTKLAQRVKDIVRGKPQDETAAPDGWGADPKDSNEQAFNIPVIYVSDEVARIYQHSKRA 835
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM-I 641
++ K V L RY Q+P+ A L G +I + + L P EK +
Sbjct: 836 GEEYSALSPIAKYCVGLARYTQSPMNEYAAL---GADISAIMFEDEDQHLIPKEKLLFAL 892
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFV 700
E+ +VDVTN+VG+DIN A++ + + L F+ GLGPRK+ SL + + G + R F+
Sbjct: 893 ERALVDVTNKVGVDINRAVNDSYYQSLLPFVCGLGPRKSQSLVQKIAGIGGHLVNRDQFI 952
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQ------FIDLLDDTRIHPESYGLAQELAKE 754
A L +F+NA GFL + + + D LD TRIHPE Y LA+++A +
Sbjct: 953 KAGLLTTNIFLNASGFLHISHDAELKPTKNRHIDDDVQDPLDSTRIHPEDYELARKMATD 1012
Query: 755 VYNRDIEGDLNDDEDA----LEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIR 810
D E D++D+ + L M + + + L ++ E + KR TL IR
Sbjct: 1013 ALELD-EEDIHDEHPSHVVSLIMQDDDNEKKLNELNLVEFAVNMFEANEDRKRHTLNDIR 1071
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV-LESG 869
EL+ + R + + M+SGET TL G +V V RV Q + V L+SG
Sbjct: 1072 EELLKPLSEQRKPFPTLQPWDILTMLSGETRRTLRMGLIVSVLVLRVVKQDFVVVRLDSG 1131
Query: 870 LAGMLMKEDYSDDWRDSELS----DKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN-- 923
+ G++ SD+ + S + +G ++ K+ + ++++ V L R +++
Sbjct: 1132 VEGVINVGYMSDEGNIAPASIVNKGQTIQGVVVEVKL-DLTQDQFLVELSARPNDLAAGD 1190
Query: 924 ---NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
+ +H + + HE S Q+ +++A+ ++ R+I HP F N A++A
Sbjct: 1191 GLFRKVKHDEMWNVQQHERDSEMQARKKRAKVDQ-------TRRVIKHPNFHNFNANQAE 1243
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
L ++ G+ +IRPSS+G +L +T KV + +Y H D+ E D + G+G L
Sbjct: 1244 NYLDKQQRGDVVIRPSSKGADHLAVTWKVDEKLYQHIDVTEINID----PTGQGVGGLLV 1299
Query: 1041 IGED-TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYG 1099
+ E + DLDE++ ++ ++ ++++ KF+ GS+ E+ L+ P + +YG
Sbjct: 1300 VDEKHQYADLDELIVNHVQATARRVEELMAHEKFKHGSEDELHSFLKNFVMANPAKSIYG 1359
Query: 1100 FGISHEHPGTFILTYI 1115
F ++ PG F L ++
Sbjct: 1360 FTLNRRKPGHFSLCFL 1375
>gi|170044989|ref|XP_001850107.1| transcription elongation factor SPT6 [Culex quinquefasciatus]
gi|167868059|gb|EDS31442.1| transcription elongation factor SPT6 [Culex quinquefasciatus]
Length = 829
Score = 330 bits (847), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 223/791 (28%), Positives = 399/791 (50%), Gaps = 90/791 (11%)
Query: 460 RVLACCWGPGKPETTFV-MLDSSGEVVDVLFTGCLTLRSQNVRDQQS--KKNDQERLLKF 516
RV+ + P + F ++ G+V D L L R R ++ K++D + + F
Sbjct: 18 RVMGVGYVPDYSQAAFAAIISPEGDVTDYLRIPHLLKRKNTFRQEEKALKESDMQSITDF 77
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ + +PHV+ +G + ++ D E + +V++ + E+++ D L ++Y
Sbjct: 78 IRNKKPHVIAIGGESKEALMVQKDFQECVKSLVDDE------QFPEIAVEIIDNELAKIY 131
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDE 636
NS + +++A++L R +Q+PL + LC EIL + L++ L ++
Sbjct: 132 SNSIKGTHDFREYPPLLRQAISLARRIQDPLIEFSQLCTADEEILCIRYHSLQDHLYKED 191
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFT 695
+ ++ TN+VG+DINLA+ +QFI GLG RK +L + L + +
Sbjct: 192 LLENLYLEFINRTNEVGVDINLAVQNSLTVNLVQFICGLGTRKGLALIKVLKQTNQRLEN 251
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
R VTA +G KVF+N GF+++ + S+ ++++LD +R+HPE+Y A+++A
Sbjct: 252 RTQLVTACHMGPKVFINCSGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMA--- 308
Query: 756 YNRDIEGDLNDDEDALEM-AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRR 811
++ DDEDA A+E + + P+ LK LD E +R+ NK TLY IR
Sbjct: 309 ----VDALEYDDEDANPAGALEEILESPERLKDLDLDAFAVELERQGFGNKSITLYDIRA 364
Query: 812 ELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRVQG------- 859
EL ++D R Y+ + +E F ++ ET +TL G++V ATV R+ QG
Sbjct: 365 ELNSRYKDLRTSYRSTTSEELFDYLTKETPETLYVGKMVLATVAGFSHRKPQGDQLDQAN 424
Query: 860 ----------QRAICV-----------------------------LESGLAGMLMKEDYS 880
Q C+ ++GL+G + ++ S
Sbjct: 425 PVRNDQTGLWQCPFCMQNEFPELSEVWNHFDAGECPGQATGVRLRFDNGLSGFIHIKNIS 484
Query: 881 DDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR----NNRYQHCQNLDPYY 936
D + +++ G + +I I R+ L C NN ++ + D YY
Sbjct: 485 DKHVKNP-EERVQLGQTIHVRITKIDVERFA--LECSSKSSDLSDKNNEWRPRK--DQYY 539
Query: 937 HEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPS 996
++ R + + +K+ E +++ K R+IVHP F N++ EA+K+L + GE ++RPS
Sbjct: 540 DQDTEDRDLKTDSDKKKTEQRQQYIK-RVIVHPSFHNISYAEALKMLERLDQGEVVVRPS 598
Query: 997 SRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRY 1056
S+G +LT + KV + VY H DI E GK+ ++ +G++L IG + FEDLDE++ RY
Sbjct: 599 SKGADHLTASWKVTNDVYQHIDIREEGKE-----NVFSLGQSLWIGNEEFEDLDEIIARY 653
Query: 1057 IDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILT 1113
I P+ ++++ +L+Y+ ++ G K + +E+L+ EK++ P +I Y ++ +PG F+L+
Sbjct: 654 ITPMAAYVRDLLNYKYYKDTGGGMKDKAEEILKDEKSKNPNKIHYVMSVAKNYPGKFLLS 713
Query: 1114 YIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPM 1173
Y+ T HEYI + P+G++FR + F+ ++ L+ +F+ H DP + P+ A
Sbjct: 714 YLPRTKCKHEYITVNPEGYRFRSQNFDSVNSLLKWFKEHFRDPIPSATPASTPRGATSAS 773
Query: 1174 RSPANGGSTAS 1184
R+P +G S
Sbjct: 774 RTPFSGSPKYS 784
>gi|392576882|gb|EIW70012.1| hypothetical protein TREMEDRAFT_71488 [Tremella mesenterica DSM 1558]
Length = 1542
Score = 329 bits (844), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 311/1228 (25%), Positives = 548/1228 (44%), Gaps = 121/1228 (9%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
+ + LD++ +Q ++P++ Y+++ L L+D ++ D+ LW
Sbjct: 338 VSKALDMMFVQNYEVPYLWHYKRD-VLGKLEDQGRSFTQFLERDE------------LWQ 384
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK-SLEAAETE 181
+H L ++ + +R K +E+ R D L + L S+ S+E+A
Sbjct: 385 LHTLGIRFRAIYERTEQA----KAAWEKIKVRRPDVEDSYLTKTLLPSVCMLSIESAAEA 440
Query: 182 REVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQ 241
E +L E ++EG KRP + + + ++ FG S Q+
Sbjct: 441 MEWLAYHYSQDLRAIKEEESIEEGG-KRPPERSGFDDLRHGPVMQLVKAFGVSVNQVATT 499
Query: 242 LSLEKMGDEL--EDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKY 297
+ E G + +P + P ++A+ + + F + ++ L+ A + E S +P +R+
Sbjct: 500 FN-EAEGSPVPPTNPDKMPLDLAAEYAGEGTPFLTGESALKAASQILTTEFSKDPSIRQQ 558
Query: 298 VRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA-QWLLIQKAEEEKL 356
R VV+ PT G S ID +H + K+L KP+ F+D+ Q+L + KAEEE L
Sbjct: 559 AREFMEYFGVVTVNPTERGISVIDQYHLYYTFKFLTRKPIAMFKDSPQFLHMLKAEEEGL 618
Query: 357 LQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEAR 416
+ + I++PE + S + A WN+ RE I +D + ++P+ + +
Sbjct: 619 INIVIEIPEADIQTFADPLVRCCRSMEYGEVATAWNEMREEICQDVVSKLIMPAAARWVK 678
Query: 417 SLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEA--APRVLACCWGPG--KPE 472
M A+ ++ L +V+V P+ TPD E P VLA G G K
Sbjct: 679 EHMRLAAEEYVAERCRMELEFRVNVRPFA------TPDMEQGETPTVLAISNGRGDIKDA 732
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
VMLD G + RSQ+ D + ++ + + +P VVV+G ++
Sbjct: 733 VIAVMLDDGGNI-----------RSQSKFDNLKDEAEKSSFIDMVERRKPSVVVIGGLSA 781
Query: 533 SCTSLKDD----IYEIIFKMVEEHP---------------------RDVGHEMDELSIVY 567
++DD + E+ K E R H +V+
Sbjct: 782 QTGRVRDDAMVALRELAAKTAEARAPLAEAYSSHEEYAVAAAEYEARIAPHLT---PLVF 838
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
+++ RLY S + + P N + A+AL RY QNPL C G+ I S
Sbjct: 839 VNDATARLYMRSEEAEKEYPTMPVNGRYALALARYAQNPL---NAHCKLGKRITSITFQE 895
Query: 628 LENFLTPDEKYGM-IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
L P+EK + +E+ +V+ +G+++N + +Q + L FI+GLGPRKA +L
Sbjct: 896 HHQKLIPEEKLLIHLERGLVNSVCFMGIEVNSCVADPYQRSMLPFIAGLGPRKADALING 955
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ-----AASSSQFIDLLDDTRIH 741
+ R GA+ R F LG VNA GFL + + +++ + LD TRIH
Sbjct: 956 IQRHGALVNRDAFAALGLLGPTNLVNAPGFLSIETDLKDIVLDEKNATDAAEPLDMTRIH 1015
Query: 742 PESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKREN 801
P+ Y A+++ ++ + D E ++ + A+ + + DR + LD +R+
Sbjct: 1016 PDDYDFARKMCQDALDLDAEDVEDEHKSAVVLKLMLDEDRAAKMAELNLDDFAWNLQRQG 1075
Query: 802 K---RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
+ R TL +I ELI D R + P++ E M++GETE T+ G +V ATVR+
Sbjct: 1076 EGVGRHTLGMIVAELISYRADRRPPFYIPTEWEVIQMLTGETERTIGRGLLVTATVRKAL 1135
Query: 859 GQRAICVLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
R C LE G+ +L ++ +D D S D + + S + +R QV + R
Sbjct: 1136 TSRVFCALECGMDAILERDYVADEDQPISSCEDLFTSRQAIRAVVISTEPSRLQVRISTR 1195
Query: 918 ESEMRNNRYQHCQNLDPYYHEERS--SRQSEQEKARKEKELAKKHFKERLIVHPCFQNVT 975
S++R Q L P+ + + +R+ E+A + K+ + +R++ HP + +
Sbjct: 1196 PSDVR----QAVPFLQPFRDDPYNDLARKHAAEEAAQHKKRREAGSVKRVVNHPNWHVMN 1251
Query: 976 ADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGI 1035
+ +A + L++++ G+ +IRPSS+G +L +T KV + VY H D+ E K ++ +
Sbjct: 1252 SGQAEQFLASQQRGDVVIRPSSKGSDHLAVTWKVDEDVYQHIDVQEIDKPNE-----YSL 1306
Query: 1036 GKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPT 1094
G+ L++ G+ ++ DLDE++ ++ + + M + K+R + E++ L+ P
Sbjct: 1307 GRILRVAGKYSYSDLDELIINHVKAIARKIDEMQMHEKYR--PEDELEAYLKNYVQAHPG 1364
Query: 1095 RIVYGFGISHEHPGTFILTYIRSTNPHHEYI-----GLYPKGFKFRKRMFEDIDRLVAYF 1149
R +YGF + + PG L ++ + I + P ++ + L F
Sbjct: 1365 RSMYGFSLDSDRPGYLKLCFLNKSTKDGGVIQTWPVKVLPGAYQLNNAEVPGVTELCNAF 1424
Query: 1150 Q-----RHIDDPQGDSAPSIRSV-AAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRS 1203
+ R + QG P IRS M+ R+P GG T + G G + GG RD S
Sbjct: 1425 KAQYSSRLSEQGQGGKTPGIRSARTPMIGGRTP--GGRTPALGMTGGRTPALGGGMRD-S 1481
Query: 1204 STPGSRTGRNDYRNGGGRDGHPSGLPRP 1231
P G + N +P+ P+P
Sbjct: 1482 MPPAGYPGYPNVPN------YPTYPPQP 1503
>gi|336262374|ref|XP_003345971.1| hypothetical protein SMAC_06525 [Sordaria macrospora k-hell]
gi|380089563|emb|CCC12445.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1386
Score = 329 bits (843), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 297/1178 (25%), Positives = 539/1178 (45%), Gaps = 124/1178 (10%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RKA + +E+ WI N +L +G S G + + L+
Sbjct: 281 RKAFKNLQMTSDQFKEEARWISNLMLPS-------KGLSSELHGP----FNKAVGKVLEF 329
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERT---PTLKWHKVLWAIHDL 126
+ +++P++ +R++ + K +N D+ D E T L LW + DL
Sbjct: 330 FVIDGVEVPYVFQHRRDYLIHAKK--MRNPNRRDDPDAPEYTVDAEKLLTQDDLWKVLDL 387
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D ++ ++++AL+S Y K +E++R D++ + + A+T E+ D
Sbjct: 388 DIRFRSFLEKRNALESTYDK-LKEKTRD--------------DTLEEMIRQAQTIEELQD 432
Query: 187 VDLKFNLHFPP--GEVGVDEGQYKRP-----KRSTKYSSCSKAGLWEVASKFGYSSEQLG 239
+ N + ++ ++ +R R+ ++ ++ ++ G + ++L
Sbjct: 433 LQDYLNFQYSAELKDLAANDNSAQREIKRAGGRTAQFERIRRSSAYKFVQALGITPDRLA 492
Query: 240 LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR 299
+ E ED P+++A A F + + V+ AR M A EI C R
Sbjct: 493 KNILRESKKVTSEDDSRLPDDLADALVDADFPTGEQVINAARQMLAEEI----CRR---- 544
Query: 300 SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLL 357
T G ID + + VK+L+ + +L + KAEEE L+
Sbjct: 545 -------------TDKGLRKIDEANPYYEVKYLKNMSIADLAVRPELFLKMMKAEEEGLI 591
Query: 358 QVTIKLPEDS--LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
++ + L D +LFSD + S+ S+ A WN+QR+ ++ A D L+ +VK
Sbjct: 592 EIKVSLENDKEFRQQLFSD----FASENFSELADKWNEQRQKVIDLAFDK-LVKVIVKGV 646
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE--- 472
+ + + LL + + ++ PY+ K I PRVL G G P
Sbjct: 647 KDSLRTACQDELLKTCRELYFKRLDQAPYKPKGMVIG----TTPRVLVLSNGMGDPNREP 702
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
++V +D G +++ G T N+ +S++ E L + + QP V+ + +
Sbjct: 703 VSWVSMDEDGRILE---HGTFT----NLARDESQR---EALAELVRRRQPDVIGISGFSA 752
Query: 533 SCTSLKDDIYEIIFK--MV---EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
L D+ ++ + +V + P + D L ++ ++ + RLY++S + P
Sbjct: 753 DTHRLIKDVEGLVSEKGLVGPEYDDPETNEYRSDLLEVIVINDEVARLYKDSPRAVSDHP 812
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ +AL RY+QNP+ A L G+++ S ++ P + +L +E MVD
Sbjct: 813 SLHPMTRYCIALARYMQNPMKEYAAL---GKDVTSLQIHPYQQYLPQARLLKHLETAMVD 869
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG--- 704
+ N VG+DIN+A+ L +++GLGPRKA L + + + G + T +D +
Sbjct: 870 MVNLVGVDINVAMQDANTAHLLPYVAGLGPRKAQLLIKGINKNGGVVTSRDELVGDPERH 929
Query: 705 ----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
LG +V+ N FL + S D LD+TRIHPE Y LA+++A + D
Sbjct: 930 KLPVLGPRVWNNCASFLFIEYEPTNPES----DPLDNTRIHPEDYDLARKVAADALGLDE 985
Query: 761 EG-DLNDDEDALEMAIEHV--RDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELI 814
E DE+ + + D D + +L+ + ++ +RE KR TL IR EL
Sbjct: 986 EDVKAETDENGAGAIVRKLFKDDEQDKVNELILEEYAEQLEREYQQRKRATLETIRAELQ 1045
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+++ R +++ + D+ F M++GE D+L EG +V A VR V+ AI L+ G+ G +
Sbjct: 1046 VPYEELRKKFESLTVDQVFTMLTGENRDSLCEGMIVAANVRVVKDDFAIVKLDCGIEGRI 1105
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
D S +R S + D LH G ++ K+ + + + L R+ EMR +H +
Sbjct: 1106 ESHDVS--YRHS-IKDVLHVGQVVQAKLIDLNRKEFVSKLSMRDEEMRRPFRRHFDHGRD 1162
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ + R + +E K+K + +R++ HP F+ + +A + L ++ GE +IR
Sbjct: 1163 QW-DYRREDEDREELREKDKTTGRA---QRVVNHPLFKPFNSTQAEEYLGSQPSGEVVIR 1218
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVD 1054
PSS+G +L +T KV DGV+ H D++E K+++ +G+ L++G+ T++DLDE++
Sbjct: 1219 PSSKGNDHLAITWKVADGVFQHVDVLELQKENE-----FAVGRVLRVGKYTYQDLDELIV 1273
Query: 1055 RYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++ + + ++ KF+KGS+ E ++ L P R Y F I +HPG F L +
Sbjct: 1274 DHVKAMAKKVDELMQCDKFQKGSRNETEKWLTTYMDANPNRSTYAFCIDTKHPGYFFLCF 1333
Query: 1115 IRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
S N + + P F+ K + D+ L F+
Sbjct: 1334 KASRNSRVNAWPVRVIPHAFELMKSQYPDVRALCNGFK 1371
>gi|290986085|ref|XP_002675755.1| predicted protein [Naegleria gruberi]
gi|284089353|gb|EFC43011.1| predicted protein [Naegleria gruberi]
Length = 1296
Score = 328 bits (840), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 327/1179 (27%), Positives = 547/1179 (46%), Gaps = 147/1179 (12%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHD--LSISRDDIMRFLDLLHLQKLDIP 78
E + +E+ WIY Q+ L + +G + ++ ++ + I++ L + + DIP
Sbjct: 197 EELYNEACWIYTQVFQSEAELSIDKYSGLEGDRYNSLKNLFVETIIKVLRFILQLRYDIP 256
Query: 79 FIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKS 138
+IA Y+KE+ +L ++ ND + LW I + D+KW +LQ +KS
Sbjct: 257 YIAQYKKEDFEHILY---KDSFGNDRD--------------LWKIFEWDEKWCILQSKKS 299
Query: 139 ALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPG 198
L + +YD + + + E +ET E++D ++LHF
Sbjct: 300 KL------------KLLYDNAKSVIPTEYL----AYFEGSETLDEIND----YHLHFTTV 339
Query: 199 EVGVDEGQYKRPKRSTK---YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
E Q KR TK Y+ K GL +AS+ SS Q L E +D
Sbjct: 340 LNEESENQLTTLKRPTKRDLYTMAKKEGLAILASQMSLSSYQYAENLESTFQIVETQDHA 399
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
P A FK F S ++VL GARH+ A +I+ EP +R+ VR F +N+ + T
Sbjct: 400 LDPASAAEVFKTRTFESIESVLGGARHICAFQIAHEPKIRQLVRRCFENNSTIKVKLTKK 459
Query: 316 GDSAIDS------------FHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL 363
G S S F +F +W +L + K E L++V++ L
Sbjct: 460 GKSVEGSDIISLLEDGRTMFTKFRD-EWAAHVRYAHDNKESFLKLLKYENLGLIKVSLFL 518
Query: 364 PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
+ + L YLS S+ A LWN+QR I+++A L ++ ++++ +A
Sbjct: 519 EDRHFDGLLK-ADVLYLSQKHSQIATLWNEQRIKIIEEA-KGILNKTIQHSVKTILRNKA 576
Query: 424 KSWL--LME--YGKALWNKVSVG--PYQRKDND-ITPDEEAAP---RVLACCWGPGKPE- 472
++ L E K L+ + G P + D D DE+ P ++L+C G + E
Sbjct: 577 ADFVSDLCESNLTKMLFEESPYGNNPRAKFDYDEFFEDEKPRPTKYKILSCVPGGEEGEK 636
Query: 473 TTFVMLDSSGEVVDVLF--------TGCLTLRSQNVRDQQSKK-NDQERLLKFMMDHQPH 523
TT+VMLD +G ++D TG + + + D K ND + HQP
Sbjct: 637 TTWVMLDENGTMIDKKVWPIGHPHTTGNTSDSDRQLIDSMVKSVND------MIASHQPS 690
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD-VGHEMDELSIVYGDESLPRLYENSRIS 582
VV L A C L I KM E R G + ++ + + R+YENS +
Sbjct: 691 VVALAA----CGGL------IFKKMKEAFERTKQGGTIFNINYEIVPDDIARIYENSSRA 740
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE 642
+++ P + V+RA+++GR L++PL + L E+L +K L++ + ++ +E
Sbjct: 741 TNEYPQENNVVRRAISVGRRLRDPLTEICGLFN-NEELLCYKFHELQDMVPKEQLVKSLE 799
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTA 702
+ +V V N+VG++IN + L+F+SGLGPRKA L + + ++ R+
Sbjct: 800 KSLVRVVNRVGVEINRIVLFPQLQPTLRFLSGLGPRKAELLINKIKQEDSVSDRESINNI 859
Query: 703 HGLGKKVFVNAVGFLRVRRSGQAA---SSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD 759
+ V +N++GFL VRR A S ++ ++D TR+H SY LA+++A+
Sbjct: 860 LNEQRNVALNSIGFLIVRRPPTIAARDSMARAFKVIDATRVHLLSYPLAKKMAE------ 913
Query: 760 IEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKREN---KRETLYLIRRELIHG 816
D + E+ I + +P L LD + E ++ N TL I+ EL +
Sbjct: 914 ---DGLETENLKTEKIHKIFKKPQALDELDLDAYADELEKRNYGKTHITLKDIKEELKYP 970
Query: 817 FQDWRNQYKEPSQDEE--FYMISGETEDTLAEGRVVQATVRRVQGQRAI-CVLESGLAGM 873
F+D R ++K + D+E F +++ ET+ +LA G+ V ATV V G+R I C L++GL G+
Sbjct: 971 FKDPRYEFKSINNDDEKVFELVTHETKKSLAPGQQVFATVVTV-GERIIFCKLDNGLYGV 1029
Query: 874 LMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLD 933
+ + + R EG+ +I+ ++ +++V LV + ++
Sbjct: 1030 IALYNRNVSLR---------EGEERYFEIERVEYKQFKVHLVPPKEDI------------ 1068
Query: 934 PYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESII 993
Y + S + K+ +KK F R I HP F++ +A+ L+ K PGE +I
Sbjct: 1069 --YAPKAESIMDQHRKSAP----SKKRF-HRQIDHPQFKDFDYSQAVAFLADKGPGELVI 1121
Query: 994 RPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVV 1053
RPSS+G +L +T K +Y + D IE K KDI SL G TLK+ F DLDEV+
Sbjct: 1122 RPSSKGYDHLAITFKFSTNLYINYD-IEEEKKGKDINSL---GSTLKVNGKIFSDLDEVI 1177
Query: 1054 DRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILT 1113
++ L+ + ++S K+ G++ E+ LR EK + P+ I Y +S F
Sbjct: 1178 FYCVESLMEYSNQLMSSSKYFNGNRDELKVHLREEKKKNPSVIPYKIVMSTSKAARFYFF 1237
Query: 1114 YIRSTNPHHE-YIGLYPKGFKFRKRMFEDIDRLVAYFQR 1151
Y+ + E + P G+ F R F+D +L+ F++
Sbjct: 1238 YLPGRHTLQEKSFTVTPDGYYFAGRQFKDTVKLINAFKK 1276
>gi|154316781|ref|XP_001557711.1| hypothetical protein BC1G_03808 [Botryotinia fuckeliana B05.10]
gi|347829354|emb|CCD45051.1| similar to transcription elongation factor spt6 [Botryotinia
fuckeliana]
Length = 1407
Score = 327 bits (838), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 294/1138 (25%), Positives = 536/1138 (47%), Gaps = 112/1138 (9%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNND--DFERTP-TLKWHKV 119
I + L+ + ++++P++ +RK+ + K N+ +DN D ++E + L
Sbjct: 327 ISKVLEFFVVDEVEVPYVFQHRKDYLIHARK----NKTRSDNPDAPEYEVSADKLLNQDD 382
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLA--LNQQLFDSISKSLEA 177
LW I +LD K+ L ++++ L + Y+ +LA ++ F+ + L
Sbjct: 383 LWRILELDLKFRALIEKRNVLD------------KTYENLKLAVGISDATFEQM---LPD 427
Query: 178 AETEREVDDVD--LKFNLHFPPGEVGVDEGQYKRPK---RSTKYSSCSKAGLWEVASKFG 232
A+T E+ D+ L F + G+ K + +++++ K+ +E+ +G
Sbjct: 428 AQTMEELQDIQDYLYFQYSSEIKSLQDSNGEVKEKRAGNKASRFDRVRKSRAYELVRAYG 487
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM-FNSSQAVLQGARHMAAVEISCE 291
+++++ + +E EDP +P ++A F + VL AR + A E+
Sbjct: 488 ITADEVAGNVLMEGRKKYTEDPPLSPIDLADTLASPEDFPTGDGVLVAARSLFAEELFMS 547
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQ 349
P +R++ R +VS T G ID H + +K+LR + + +L +
Sbjct: 548 PKMRQHFRKHHYMQGLVSCARTDKGLKKIDEQHPYYELKYLRNQTFMDIASKPEMFLKML 607
Query: 350 KAEEEKLLQVTIKL--PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
KAEEE LL+V + L D +LF + + SD S+ A WND+R+ +L A L
Sbjct: 608 KAEEEGLLEVRVSLQNERDFRRQLFGE----FRSDNYSEVADAWNDERQKVLDIAFSK-L 662
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
++ K + M + +L + K+ PY+ + + PRVLA G
Sbjct: 663 ERTITKGVKESMRTECQDSILKICREEYSRKLDQAPYKPRGMVLG----TIPRVLALSNG 718
Query: 468 PGKPE---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHV 524
G P + ++ G V+D L+ RDQ+++ E + + +P V
Sbjct: 719 NGDPNRDAVCWAYVEEDGRVLDHGKFDNLS------RDQRAR----EAFVDLVRRKKPDV 768
Query: 525 VVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE----------LSIVYGDESLPR 574
+ + ++ L + E +V+EH G+E D L I+ ++ + R
Sbjct: 769 LGVSGFSVETHKLVSSLKE----LVQEHSLR-GNEFDNEDGDGERSEPLDIIVVNDEVAR 823
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
LY++S ++ P + V L +YLQNP+ A L G++I+S P + L
Sbjct: 824 LYKDSPRAAVDHPAFAPLARYCVGLAKYLQNPMKEYAAL---GKDIISLSFHPSQQLLPE 880
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAI 693
D+ +E MVD+ N G++IN A++ + L FI GLGPRKA ++ +S+ G +
Sbjct: 881 DKLRRQLETAMVDMVNLCGVNINEAVNDAYTANLLPFICGLGPRKATAVLKSINANGGVV 940
Query: 694 FTRKDFV------TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
TR++ V +G +V+ N FL + +S D LD+TR+HPE Y L
Sbjct: 941 NTREELVGDPDNNKLPVVGPRVWNNCASFLYMEYESANPAS----DYLDNTRVHPEDYEL 996
Query: 748 AQELAKEVYNRDIEGDLNDDEDALEMAIEHVR-----DRPDLLKTYLLDRH---IKEKKR 799
+++A + D E + ++ AI VR D + + +L+ + +++
Sbjct: 997 GRKMAADALELDEEDVKAEVDEGGPGAI--VRKLIKDDEQEKVNDLILEEYADQLEKNYN 1054
Query: 800 ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQG 859
+ KR TL IR EL+ +++ R + S DE F M++GET ++L EG +V +R +
Sbjct: 1055 QRKRATLETIRAELLAPYEELRRNFGMLSDDEIFTMLTGETHESLCEGMIVSVNIRVAKD 1114
Query: 860 QRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRES 919
I L+SG+ G + K+D SD+ ++ L+ G K+ + + + L RES
Sbjct: 1115 DFIIAKLDSGIEGRVEKDDGSDN-PNASLNRLFSVGQTAQAKLLDVDRRNFAARLSLRES 1173
Query: 920 EMRNNRYQHCQNLDPY-YHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADE 978
+MR R + +++ + H+E+ R+ +EK + + +R++ HP F+ A +
Sbjct: 1174 QMRPYRRRIDRDISTWDIHQEQKDREELREKDKATGRV------QRVVKHPLFRPFNATQ 1227
Query: 979 AMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKT 1038
A + L ++ PG+++IRPSS+G +L +T KV DGVY H D++E K+++ +G+
Sbjct: 1228 AEEYLGSQAPGDAVIRPSSKGNDHLAVTWKVADGVYQHLDVLELQKENE-----FSLGRQ 1282
Query: 1039 LKIGED-TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIV 1097
L+I + DLDE++ ++ + ++ M+ + KF+KGS+ + + L P R V
Sbjct: 1283 LRINNKYNYSDLDELIVDHVKAMSRKVEEMMLHEKFQKGSRTDTERWLTTYTEANPKRSV 1342
Query: 1098 YGFGISHEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ-RH 1152
Y F + HPG F L + + + + + P F+ K + D+ L F+ RH
Sbjct: 1343 YAFCLDTRHPGYFHLCFKAGQQARVNSWAVRIVPNAFELLKSQYPDMKALCNGFKLRH 1400
>gi|432096066|gb|ELK26934.1| Transcription elongation factor SPT6 [Myotis davidii]
Length = 1271
Score = 327 bits (838), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 258/928 (27%), Positives = 424/928 (45%), Gaps = 125/928 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 317 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 376
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 377 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 413
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 414 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYSHFLLY 468
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 469 YGRDIPKMQNAAKANRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 528
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F +AVL+GAR+
Sbjct: 529 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPPPEAVLEGARY 588
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 589 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 648
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 649 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 708
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 709 MAIERALQQFLYVQMAKELKNKLLVEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 767
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK- 507
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 768 FMEENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 827
Query: 508 -------------NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
D E L KF+++ +PHVV + N L +D+ I+ H
Sbjct: 828 AKPFNSNFLSIQAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HEL 881
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
D G ++ + + D L LY NS+ S + +++AV+L R +Q+PL A +C
Sbjct: 882 DQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVC 941
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
+IL K PL+ + +E + ++ N+VG+D+N AI + A +Q++ G
Sbjct: 942 SSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCG 1001
Query: 675 LGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
LGPRK L + L + + +R VT +G KVF+N GFL++ + S+ +I+
Sbjct: 1002 LGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIE 1061
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH 793
+LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ LK LD
Sbjct: 1062 VLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAF 1117
Query: 794 IKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
+E +R+ +K TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++
Sbjct: 1118 AEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLI 1177
Query: 851 QATV-----RRVQGQ---RAICVLESGL 870
V RR QG+ +AI E+GL
Sbjct: 1178 ICNVTGIAHRRPQGESYDQAIRNDETGL 1205
>gi|255945127|ref|XP_002563331.1| Pc20g08080 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588066|emb|CAP86137.1| Pc20g08080 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1409
Score = 325 bits (833), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 308/1168 (26%), Positives = 530/1168 (45%), Gaps = 102/1168 (8%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
+E+ WI N L L +R +E S+++ L+ L ++PFI +R
Sbjct: 290 EEAVWISN------LMLLKKRMDPELREPFQRSVAK-----MLEFLITDDWEVPFIFQHR 338
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFE-RTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSY 143
K+ + +KD+ D++ + R L LW I D D K+ L ++ +Q
Sbjct: 339 KDYMIHAVKDMANGADAGDDSAQYSIRAEKLLNMTDLWDIFDHDLKFRALIDKRGTIQKT 398
Query: 144 YKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPP-----G 198
Y + + I++ T + QLF AA T E+ DV + +
Sbjct: 399 Y-----DNLQSIFNVTDSNVEDQLF--------AAATMEELQDVQDYIHFQYSSQLRDLN 445
Query: 199 EV-GVDEGQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
+V G G+ +R K + + + + FG +++ S E EDP
Sbjct: 446 QVNGEANGETQRRKATGRSFFERVRNGKAYGFVRAFGITADAFAQNASKEGRRQYTEDPT 505
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
E PE++A F F++S VL+ A+ M A E++ P +RK +R + N VV T
Sbjct: 506 EQPEDLADQFVDNDFSNSSHVLKAAKSMFAEELTVSPKMRKVMRQAYYMNGVVDCFRTEK 565
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLP--EDSLNKL 371
G ID H +A K+LR + L +L + KAEEE L+ V ++ + +L
Sbjct: 566 GLRRIDEQHPYAEFKYLRNQQLSDIARRPEMFLRMLKAEEEGLVDVRVRFENFDQFRTRL 625
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGRAKSWLLM 429
++D + SD S+ A WN R +L AL L+ VKE + ++ +
Sbjct: 626 YADIE----SDNYSELADAWNRVRREVLDLALGKLEKLINRSVKEN---IRQECENHVAK 678
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLF 489
E +A ++ PY+ K + PRVL G G+ + + E VL
Sbjct: 679 ECREAFSQRLDQAPYKPKGMVLG----TVPRVLTLSTGSGQVGRDPIHWAYTEEDGRVLE 734
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKF--MMD-HQPHVVVLGAVNLSCTSLKDDIYEII- 545
G S V D+ D + L F ++D +P V+ + + L + EI+
Sbjct: 735 NGKFIDLS--VGDESRGIADGDNLAAFVDLVDRRRPDVIGVSGMTPETRRLYKLLSEIVD 792
Query: 546 ------FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVAL 599
EH ++ D L +V ++ + RLY NS + PG VAL
Sbjct: 793 QKDLRGASYTNEHDEEIS---DTLEVVIVNDEVARLYHNSPRARSDNPGFGPLTHYCVAL 849
Query: 600 GRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLA 659
GRYLQ+PL A+L GR+I+S + P + ++ D +E +VD+ N VG+D+N A
Sbjct: 850 GRYLQSPLKEYASL---GRDIVSIQFKPGQQLVSQDLLLKQLETALVDMVNLVGVDLNEA 906
Query: 660 IHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV----TAHGLGKKVFVNAV 714
+ L ++ GLGPRKAA L + + + G + R + + T +G KV+ N
Sbjct: 907 VADTATANLLPYVCGLGPRKAAHLLKIVNMNGGIVNNRVELLGVNATYPAMGVKVWNNCA 966
Query: 715 GFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED----- 769
F+ + + D LD+TR+HPE Y +A+++A + D E D+ + D
Sbjct: 967 SFVYIDFENADPDA----DPLDNTRVHPEDYDIARKMAADALELD-EEDIKAETDENGTG 1021
Query: 770 --ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEP 827
++ E +DR + L +++ + KR TL IR EL +++ R Y
Sbjct: 1022 AIMRKLFREEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYEELRKHYVFL 1081
Query: 828 SQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSE 887
S D+ F M++GET D+L G VV ++RV L+ G+ ++ + + + D
Sbjct: 1082 STDDIFTMLTGETPDSLTPGMVVPIAIKRVFEDHIEAKLDCGVDVLVAETELGVPY-DVP 1140
Query: 888 LSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN--NRYQHCQNLDPYYHEERSSRQS 945
+ + + KI + + + + RE ++ + R Q D +ER+ ++S
Sbjct: 1141 VRNAYQVHQTVPAKILFLNRKGFSCNVSLREDQVSHPSRRSQDHGFGDWDEQQERADKES 1200
Query: 946 EQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTL 1005
QEK ++ + R+I HP F+ + +A + L ++ PG+ +IRPSSRG +L +
Sbjct: 1201 LQEKTQRGGQAM------RVIKHPLFRPFNSTQAEEFLGSQSPGDVVIRPSSRGHDHLAV 1254
Query: 1006 TLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHL 1064
T KV GVY H D++E K+++ +G+ LK+ G T+ DLD+++ ++ + +
Sbjct: 1255 TWKVAQGVYQHIDVLELDKENE-----FSVGRVLKVGGRYTYSDLDDLIVNHVKAMAKKV 1309
Query: 1065 KAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEY 1124
M+ + KF++G+K E D+ L P R Y F I+ ++PG F L + + +
Sbjct: 1310 GEMMFHEKFQEGNKTETDQWLETYTKANPRRSAYAFCINAKYPGYFYLCFKAGEHARLQN 1369
Query: 1125 --IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ + P+G++ +K + D++ L F+
Sbjct: 1370 WPVKVIPQGYELQKNPYPDMNALCNGFK 1397
>gi|430813219|emb|CCJ29418.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1357
Score = 325 bits (833), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 293/1118 (26%), Positives = 521/1118 (46%), Gaps = 117/1118 (10%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E I+ E W+ N+LL S + L + + +D + + FI
Sbjct: 275 EDILKEYDWVSNRLL----------FVRSDIDNILLKPFKKAVKNVIDFYNRDFFEPSFI 324
Query: 81 AMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKW-LLLQKRKSA 139
RK+ L K ++ + N + TL LW I DLD K+ ++KR S
Sbjct: 325 WQNRKDYLLFSEKTTDERKAN--------KVHTLLRQSDLWKILDLDLKFRAFIEKRNSF 376
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGE 199
+++ L L+ +L +E E + +DL ++F E
Sbjct: 377 FETF---------------KNLDLDDKLLKECIGKVECFE-----EIIDLYDYIYFRYSE 416
Query: 200 ----VGVDEGQ-YKRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDEL-E 252
+ + +G +KRP + + Y+ K + + FG E +G LE E
Sbjct: 417 NIKDMNISQGSTFKRPSNKYSFYAKIRKDNFYNLVRAFGLPPEHIGKNF-LENTKRYFPE 475
Query: 253 DPKETPEEMASNFKC-AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC 311
DP + PE +A + + + S L AR + E+ +P VRK +R+I++ ++
Sbjct: 476 DPDKWPEVLAEEYVMGSNYLSVSNALAVARKVVVDELLNDPQVRKSIRTIYLKKCYINVN 535
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRK-FEDAQWLL-IQKAEEEKLLQVTIKLPEDSLN 369
PT G ID+ H F K+ R F D + L + AE++ L+ V+I L D +
Sbjct: 536 PTEKGIRKIDNDHPFYFFKYARRVSTENMFHDPDFYLQMINAEDQDLVTVSIHL--DGYD 593
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
+FS+ E +SD VS+ A WN+QR+LIL D + P M K + + + L
Sbjct: 594 NIFSEMFELLISDNVSEIASAWNNQRKLILIDLFAR-IKPIMEKTIKENLKSDCEDVLSF 652
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKP---ETTFVMLDSSGEVVD 486
K +K+ PY K + D+ PRVL G G P +T V +D +G+V++
Sbjct: 653 FCRKKFLDKLDRTPYILK----SLDKGEIPRVLTVSNGRGDPTKDDTLCVFVDENGKVLE 708
Query: 487 VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
+R ++ ++ SKK L F+ P V+ + ++S L+ + +I+
Sbjct: 709 -------HIRISDINEENSKK----ELFDFIERRNPDVIGISGFSVSVDFLRRCLKDIVD 757
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
+ + + H + +VY ++ + RLY+NS +S + P K V+L RY+Q+P
Sbjct: 758 NINAKQSDNNDH----IRVVYVNDDVARLYQNSERASKEFPNLPSLGKYCVSLARYMQSP 813
Query: 607 LAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
L A + G +I S P ++ + D+ ++E +VD+ N VG++IN + ++
Sbjct: 814 LMEYAAM---GNDITSISFHPWQHLIPRDKLQRVLETAIVDIVNLVGVNINDVVKSSYKS 870
Query: 667 APLQFISGLGPRKAASL-QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
L ++ GLGPRKA SL +R + G I R + +T + + +F+N FL++ +
Sbjct: 871 NLLPYVCGLGPRKAQSLCKRISLVGGYISNRAELITKSIVTRNIFINCASFLKIPYDDNS 930
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLL 785
S S ++LD TR+HPE Y LA+++A + D E D +A + D PD L
Sbjct: 931 TSDSS--EILDSTRVHPEDYELARKMAADALELDEEDVEEYDSSGGIVA-HLMNDDPDKL 987
Query: 786 KTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETED 842
+L+ + ++ ++ + KR TL IR EL + +++ R YK+ + E F M++GET +
Sbjct: 988 SDLILEEYAEQLEKVFQQLKRNTLETIRDELQNPYEELRKDYKDITDQEIFTMLTGETPE 1047
Query: 843 TLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKI 902
+L G V+ TV+++ + L G+ G + SD++ + S L G I+ +
Sbjct: 1048 SLKPGSVIPVTVKKISNRHVTVKLNCGIDGNIASSQISDNY-NVLPSQVLQYGQIVQAVV 1106
Query: 903 KSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFK 962
S+ ++ L + S ++ Y ++ S+ + +++A E+ +
Sbjct: 1107 LSLNFQKFTAELSTKASSIKEA-----------YKNQKISKIALKKEA--EQRIT----- 1148
Query: 963 ERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEG 1022
R+I HP F+ A +A L+ + G+ +IRPSS GP ++ +T K+ +G+Y H D++E
Sbjct: 1149 -RVIKHPLFRPFNARQAEDYLAGMQRGDVVIRPSSSGPDHIAITWKISEGIYQHIDVLEL 1207
Query: 1023 GKDHKDIKSLVGIGKTLKI-GED---TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSK 1078
K+++ +G+ L++ G++ ++ DLDE++ +I + + M + K K
Sbjct: 1208 DKENE-----FSVGRQLRVRGKEQNYSYSDLDELIVSHIKSIARKVDEMTTNEKISKSFL 1262
Query: 1079 AEVDE--LLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
+ E L R +A P R Y F + ++PG F L +
Sbjct: 1263 IVILEQWLNRYSEAN-PRRSCYAFCFNPKYPGFFDLCF 1299
>gi|440636926|gb|ELR06845.1| hypothetical protein GMDG_08136 [Geomyces destructans 20631-21]
Length = 1420
Score = 325 bits (833), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 299/1181 (25%), Positives = 538/1181 (45%), Gaps = 98/1181 (8%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RKA + +E+ WI N + P P G + I + L+
Sbjct: 286 RKAYRHVQITDDQFKEEAKWITNLIWPKKRP-------NLPPGGDLQGPFQKAIGKVLEF 338
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT-LKWHKVLWAIHDLDK 128
+ ++++P++ +RK+ + + + +N + ++ T L LW I +LD
Sbjct: 339 FVVDEVEVPYVFQHRKDYLIHAKRTRLAPDPSNPDQPEYGVTAQKLLNQDDLWRILELDL 398
Query: 129 KWLLLQKRKSALQSYYKKRYEEESRRIYDETRLA--LNQQLFDSISKSLEAAETEREVDD 186
K+ +++ L+ + YD + A + ++F+ + + A T E+ D
Sbjct: 399 KFRAFVDKRNILE------------KAYDNLKSASDVKDEMFEEM---IPVAATMEELQD 443
Query: 187 VDLKFNLHFPPG----EVGVDEGQYKRP------KRSTKYSSCSKAGLWEVASKFGYSSE 236
L+ LHF ++ V +G K P RS+ + + + +G S+E
Sbjct: 444 --LQEYLHFTYSGQLKDLAVIDGNAKEPHQRRPGSRSSIFERVRNGQAYNLVRAYGISAE 501
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAM-FNSSQAVLQGARHMAAVEISCEPCVR 295
+ E EDP P E+A F + + VL AR M + E+ P +R
Sbjct: 502 DIAKNALREGRKQYTEDPAVRPIELADTLTSDDDFRTGEQVLLAARQMFSEEMVMNPRMR 561
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEE 353
K+ R + VS T G ID +Q+ +K+LR + + +L + KAEE
Sbjct: 562 KHFRMSYFQMGTVSCQRTEKGLRRIDDQNQYYELKYLRNMTIPDIARQPEVFLKMLKAEE 621
Query: 354 EKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVK 413
E LL+V I + ++ + + SD S+ A WND+R +L A L MVK
Sbjct: 622 EGLLEVRITMQQE--RDFRRQLLQEFTSDNYSEVADAWNDERLKVLDLAFRR-LDRIMVK 678
Query: 414 EARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---K 470
+ M +S +L K+ PY+ K + PRVLA G G +
Sbjct: 679 SVKENMRNECESEVLKACRDEYSKKLDQAPYKPKGMVLG----TTPRVLALSSGSGDAAR 734
Query: 471 PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAV 530
+ ++ G V++ G S RD +S+ + + + +P V+ +G
Sbjct: 735 GPVYWAWVEDDGRVLE---NGQFENLS---RDDRSR----DEFAELVQRRKPDVIGVGGF 784
Query: 531 NLSCTSLKDDIYEIIFKMVEEHP----RDVGHEMDE-LSIVYGDESLPRLYENSRISSDQ 585
++ + DI +++ + P RD +E L +V ++ + RLY +S +
Sbjct: 785 SIETNKMIKDIRDLVAERDLRGPDFDVRDTNETHNEQLEVVVVNDEVARLYRDSPRALGD 844
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
PG + VAL +YLQNP+ A L G +I+S ++ + + ++ M
Sbjct: 845 YPGLSSVTRYCVALAKYLQNPMKEYAAL---GNDIVSLIFHRCQHLVPEETLRKQLDTAM 901
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG- 704
VD+ N G+DIN A+ + L ++ GLGPRKA S+ +++ G + +D +
Sbjct: 902 VDMVNLCGIDINEAVTDPYVANLLPYVCGLGPRKATSVIKAINMNGGMVNSRDELVGDPD 961
Query: 705 ------LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EV 755
+G +V+ N FL + ++S D LD+TR+HPE Y L +++A E+
Sbjct: 962 SQKLPVVGPRVWNNCASFLSIEYDPSMSTS----DYLDNTRVHPEDYELGRKMAADALEL 1017
Query: 756 YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRE 812
D++ +++++ + D D + +L+ + +++ + KR TL IR E
Sbjct: 1018 DEEDVKAEVDENGPGAVVRKLIKDDEQDKVNDLILEEYAEQLEQNYNQKKRATLETIRAE 1077
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
LI +++ R + S+D+ F M++GET D+L EG VV VR V + I L+SGL G
Sbjct: 1078 LIQPYEELRRNFAMLSEDDVFTMLTGETNDSLCEGMVVSINVRVVNDEFLIVKLDSGLEG 1137
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNL 932
+ + +D+ D L +G K+ S+ + + L RE E++ + ++
Sbjct: 1138 RVEAYEATDN-NDVPLPRLFSQGQAAQAKLLSVDRREFSAKLSMREQEVKRPFRRRLNHM 1196
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D + + +R ++E+ R++ ++ + +R+I HP F+ + +A + L ++ G+++
Sbjct: 1197 DDQWDSNQEAR--DREELREKDKVTGR--AQRVIKHPLFRPFNSTQAEEYLGSQSSGDAV 1252
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDE 1051
IR SS+G +LT+T KV DGVY H D++E K+++ +GK L+I G+ T+ DLDE
Sbjct: 1253 IRTSSKGNDHLTVTWKVADGVYQHIDVLELLKENE-----FTVGKQLRIGGKYTYSDLDE 1307
Query: 1052 VVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFI 1111
++ ++ + + M+ + K++KGSKA+ + L P R VY F I +HPG F
Sbjct: 1308 LIVDHVKAMARKVDEMMQHEKYQKGSKADTERWLTTYTEANPKRSVYAFCIDPKHPGYFH 1367
Query: 1112 LTYIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
L + N + + P F+ K + D+ L F+
Sbjct: 1368 LCFKGGQNAKLNAWPVKVIPNAFELLKNPYPDMRALCNGFK 1408
>gi|453086513|gb|EMF14555.1| SH2 domain-containing protein [Mycosphaerella populorum SO2202]
Length = 1431
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 281/1127 (24%), Positives = 520/1127 (46%), Gaps = 81/1127 (7%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE-RTPTLKWHKVLW 121
+ + L ++++ L+ FI RK+ L EQ ++ N F + L LW
Sbjct: 333 VKQVLQFMNVEDLEPAFIVQNRKD----YLIHSEQVPNDDPNGPPFVIKAEKLLNQTDLW 388
Query: 122 AIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF-DSISKSLEAAET 180
+ + D K+ +R+ A+Q ++ + E N ++F D I + + +
Sbjct: 389 DVLEQDLKYRAFAERRDAIQ---------KNVELLKEIETDFNDEIFNDLIPLAAQLDDL 439
Query: 181 EREVDDVDLKFNLHFPPGEVGVDE--GQYKRPKRSTKYSSCSKAG-LWEVASKFGYSSEQ 237
+ D ++ ++++ + E G KR + + ++G + + FG +++
Sbjct: 440 QDLQDYLNFQYSIQLKDLSIAEAETNGTQKRARGTRSLWDKVRSGPAYHLVRAFGITADA 499
Query: 238 LGLQLSLEKMGDE--LEDPKETPEEMASNF-KCAMFNSSQAVLQGARHMAAVEISCEPCV 294
+ + +G EDP ++PE++A + + + + VL A+ M EI P +
Sbjct: 500 IAQNAENQAVGRRRYTEDPDQSPEDIADTLIRDPDYKTGEDVLAAAKAMFVEEIVMSPRM 559
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF---EDAQWLLIQKA 351
R+++R I+ +N V T G I+ H + K+LR + +R F + +L + KA
Sbjct: 560 RRHMRKIYYENLVFDCFRTEKGLKQINEEHPYYEFKYLRNQEVRYFLVEKPELFLRMLKA 619
Query: 352 EEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
E + L++V +KL + KL D ++ SD S A WN R +L A+ + +
Sbjct: 620 EADGLVEVRVKLRGEKRIKL--DLQKTIESDNFSAVADAWNALRREVLDTAVSK-MHRII 676
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK- 470
K + + ++ + + K+ PY+ K ++ RVLA G G
Sbjct: 677 SKGVKDNLKNECENKIGSYCRDSFTQKLDQAPYKPKGMELG----THARVLALSNGAGNR 732
Query: 471 -PETTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG 528
+ +D +G V + G LR N D + + +P V+ +
Sbjct: 733 GDAICWAYVDENGAVKE---NGKFADLRPGNEEKYIPDGKDIASFKEVVQRRRPDVIAVS 789
Query: 529 AVNLSCTSLKDDIYEIIFK-----MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
++ L D+ +I+ K E P + D L ++ + + RLY S S+
Sbjct: 790 GWSVETYKLYQDLKDIVRKHELHGAAYEDPDEDREVTDPLEVIIPQDEVARLYWTSDRSA 849
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQ 643
+ PG + +AL Y+QNP+ A L ++I S P +N L D+ +E
Sbjct: 850 VEHPGVPPLTRYCIALALYMQNPMKQYAAL---KKDITSITFDPNQNLLPEDKLRRYLET 906
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV-- 700
MVD+ N VG+D+N A+H + L ++ GLGPRKA +L +++ V G + R D V
Sbjct: 907 AMVDIVNLVGVDVNEAVHDSYTANLLPYVCGLGPRKADNLIKAVTVNGGEVANRADLVGD 966
Query: 701 ----TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY 756
+G K++ N FL + S D LD+TRIHPE Y +A+++A +
Sbjct: 967 LDRQLRPAVGPKIWTNCGSFLYITWEDDPES-----DYLDNTRIHPEDYEIARKMAADAL 1021
Query: 757 NRDIEGDLNDDEDALEMAI-------EHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLI 809
D E D+ ++D M E +D+ + L + ++EK KR TL I
Sbjct: 1022 ELD-EEDIKAEQDDNGMGAVVRRLIKEEQQDKVNDLVLEQYAKQLEEKFHHKKRATLETI 1080
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
R EL + +++ R + + DE F ++GET ++L +G +V +V+R LE G
Sbjct: 1081 RAELQNPYEELRRNFNSLTTDELFTQLTGETRESLTDGMMVSVSVKRTFPDHIEVKLECG 1140
Query: 870 LAGMLMKEDYSDDWRDSELSDK----LHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
+ G + + +Y ++ + + +H+ ++ K+ + + ++ L RESEMR
Sbjct: 1141 IDGGISETEYPEEMVRQAIEPRRMWSMHQ--VIQAKLSFVDRKKFTAQLTLRESEMRK-- 1196
Query: 926 YQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSA 985
+N D E ++ + +K K+ +K ++R+I HP F+ + +A++ L
Sbjct: 1197 -PFRRNFDHGLEEWDDMQEEQDQKVAKKAIESKTGRQQRVIKHPLFRPFNSTQAIEALQT 1255
Query: 986 KEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDT 1045
+ G+ IIRPSS+GP +L +T K+ DGVY H D++E K+++ +G+TLK+G+ +
Sbjct: 1256 QNRGDCIIRPSSKGPDHLAVTWKIADGVYQHIDVLELDKENE-----FSVGRTLKVGKYS 1310
Query: 1046 FEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHE 1105
+ DLDE++ ++ + + M + +F+ G+K + ++ L P R +Y F ++
Sbjct: 1311 YSDLDELIVLHVQAMAKKVDEMTNDERFQNGTKEQTEQWLTTYTEANPKRSMYAFCLNRS 1370
Query: 1106 HPGTFILTYIR--STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+PG F L + + P H + + P+GF+ R + D+ L F+
Sbjct: 1371 YPGYFYLCFKAGYAAPPAHWAVKVIPQGFELRNNKYPDVRALKNGFK 1417
>gi|171691805|ref|XP_001910827.1| hypothetical protein [Podospora anserina S mat+]
gi|170945851|emb|CAP72652.1| unnamed protein product [Podospora anserina S mat+]
Length = 1419
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 315/1191 (26%), Positives = 531/1191 (44%), Gaps = 123/1191 (10%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RK T E +E+ WI N +L G + + + L+
Sbjct: 280 RKPFQHQQTSAEGFKEEARWITNLILPHKRLSSDLHGPLTKA-----------VCQVLEF 328
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDN---NDDFERTPTLKWHKVLWAIHDL 126
+ ++PF+ R++ + K + + D N D E+ L LW I +L
Sbjct: 329 FVIDAYEVPFVFQQRRDYLIHAKKSRNLDRDDPDAPAFNIDAEK---LLNQDDLWRILEL 385
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D K+ L ++++ L+ Y E +L + + +S+++ AAET E+ D
Sbjct: 386 DIKFRSLVEKRTVLEKSYNSLKE----------KLNIQDDIIESMTR---AAETTEELQD 432
Query: 187 VDLKFNLHFPP----------GEVGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKFGYSS 235
+ FN + E G Q KRP ++ + K+ +E G S
Sbjct: 433 LQDYFNFRYSAEIKQAAAMAAQEEGHQTEQLKRPGTKTALFERIRKSKAYEFVQALGISP 492
Query: 236 EQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR 295
+QL + +D + P +A + F +++ V AR M A E+ P +R
Sbjct: 493 DQLARNALQDGRRVSSDDNPQDPISLADSLVDNFFYTAEQVTNAARQMYAEELFVSPRMR 552
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED--AQWLLIQKAEE 353
K+ R + +V+ T G ID H + +K+L + F D +L + KAEE
Sbjct: 553 KFFRKNYYGTGIVNCRRTEKGLRKIDESHPYYEIKYLVNYSIMDFVDRPEVFLKMMKAEE 612
Query: 354 EKLLQVTIKLP-EDSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLP 409
E L+++ ++L E S K L+ D ++SD S A WN +RE +L A++ ++
Sbjct: 613 EGLVEIRVELSNERSFRKNLYQD----FVSDNFSSLADAWNGEREKVLDMAINRLHKVIE 668
Query: 410 SMVKEA-RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG- 467
VKE+ R+ R EY K ++ P + K + PRVL G
Sbjct: 669 KGVKESIRTACQERLLQACREEYSK----RLDQAPIKPKGMVLG----TVPRVLVLTNGM 720
Query: 468 --PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
PG+ + +D G+V + L RD+ N +E + + +V
Sbjct: 721 GDPGRDPIYWACMDEHGKVNEYGTFNNLA------RDE----NQREEFASLCVRKEFDMV 770
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE-----LSIVYGDESLPRLYENSR 580
+ + L D+ +I P + DE L +V ++ + RLY++S
Sbjct: 771 GICGFSADTQRLIKDVEGLISDKGLMGPPYPDPKTDESRVDLLDVVVVNDEVARLYKDSP 830
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
P + +AL RY+QNPL A L G++++S + P + +L D+
Sbjct: 831 RGVTDHPTLNPLTRYCIALARYMQNPLKEYAAL---GKDVISLSIHPYQQYLPQDKLLKQ 887
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFV 700
+E MVD+ N +G++IN A+ + L +I+GLGPRKA L + + G + +D +
Sbjct: 888 LETAMVDMVNLIGVEINEAMKDPYTANLLPYIAGLGPRKAQLLIKGINANGGVVNARDEL 947
Query: 701 TAH-------GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
LG +V+ NA FL + S D LD+TRIHPE Y LA+++A
Sbjct: 948 VGDFSRHKIPVLGPRVWNNAASFLYIEYDSTHPDS----DPLDNTRIHPEDYDLARKVAA 1003
Query: 754 EVYNRD-----IEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRET 805
+ D E DLN + D + + +L+ + ++ +RE KR T
Sbjct: 1004 DALGLDEEDVKAETDLNGPAAIVRKLFND--DVQEKVNELILEEYAEQLEREYSQRKRAT 1061
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV 865
L IR EL F++ R + + D+ F M +GET ++L EG +V VR V+ AI
Sbjct: 1062 LEAIRAELQVPFEELRKNFVTLTGDQIFTMFTGETRESLCEGMIVPVNVRVVKDDFAIVK 1121
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR--- 922
L+ G+ G + E + R S + D L G + K+ + + L RE EMR
Sbjct: 1122 LDCGIEGRI--EAHETSHRHS-VKDVLSVGQTVQAKLIDVNRKDMTCKLTMREEEMRRPY 1178
Query: 923 NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
Y H ++ Y E+ +++E+ R++ + + +R+I HP F+ + +A +
Sbjct: 1179 RKNYDHGRDQWDYRLED-----ADREELREKDRVTGR--TQRVIKHPLFKPFNSTQAEEY 1231
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L + PGE +IRPSS+G +LT+T KV DGV+ H D++E KD++ +GK LK+G
Sbjct: 1232 LGGQPPGEVVIRPSSKGNDHLTITWKVADGVHQHIDVLELQKDNE-----FSVGKVLKVG 1286
Query: 1043 ED-TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFG 1101
T+ DLDE++ ++ + + ++ + KF+KGS+A++++ L PTR Y F
Sbjct: 1287 SKYTYTDLDELIVDHVKAMAKKVDELMQHEKFQKGSRADLEKWLTTYIDANPTRSTYAFC 1346
Query: 1102 ISHEHPGTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
I +HPG F L + S N + + P ++ K + D+ L F+
Sbjct: 1347 IDKKHPGYFHLCFKASKNSKVNGWVVRVVPHAYELMKNAYPDMRALTNGFK 1397
>gi|452823837|gb|EME30844.1| transcription elongation factor SPT6 [Galdieria sulphuraria]
Length = 1510
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 303/1238 (24%), Positives = 563/1238 (45%), Gaps = 160/1238 (12%)
Query: 16 PPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKL 75
P T E + +E++WIY + R KE IS L +H+++
Sbjct: 313 PCTSTEELTEEASWIYQRAFE-----MDDRFDQFQKEEIIKKISA-----LLSFVHIEQF 362
Query: 76 DIPFIAMYRKEECL-SLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
DIPFIA+YR+E LLK LE + + +D W K +W + D D +W +
Sbjct: 363 DIPFIAIYRREYLSPELLKVLESSSIQQRQDD---------W-KYIWRVLDWDVQWYRFK 412
Query: 135 KRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
RK LQ + I E ++L ++I +SL + E ++ D++ L
Sbjct: 413 TRKLKLQ---------DELAIVSENLSEEEKKLSEAIKESLHFTQDEEDLADIEAGLRLC 463
Query: 195 FPPGEVGVDEGQYK-------RPKRSTKYSSCSKAGLWEVASKFGYSSEQLG-------- 239
+ + + K RPK+ KY++ K G E + F + QL
Sbjct: 464 YIWNSLNSSTEEEKKSQRVTARPKQRDKYTTICKRGWKEFLNHFVLTPFQLAENVSTMYQ 523
Query: 240 --LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAV---LQGARHMAAVEISCEPCV 294
+QLSL K TP E+A+ + + + + L R + E+S +P
Sbjct: 524 KYVQLSLNK----------TPSELATEWLTSRNENIDILDNFLDSCRFLFIRELSVDPRF 573
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAE 352
R V S A++++ PT S +D F + + +KP+++ +++ ++
Sbjct: 574 RSTVHSFLRKEALLTSKPTLKAISDLDDFDRLKPCCSIYQKPIQRLLKPSSEFSIVAYCR 633
Query: 353 EEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
+ + I++ +L + K S+G+S+ + WN + E I+++++ ++
Sbjct: 634 KLGYTLIEIEVDRKALRDFIEELKTLGRSEGLSRYSTEWNQEIETIIEESVRR-VISEQC 692
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD-------------NDITPDE---- 455
+E + R+ +L E+ + +S+GP + +DI +
Sbjct: 693 RELELCLEKRSNLFLREEFRQEAETILSLGPISKYIGLNSKSRIISFFLSDIFSKQVVQG 752
Query: 456 EAAPRVLACCWGPGKPETTFVMLDSSGEVVDVL-FTGCLTLRSQ-NVRDQQSKKNDQERL 513
E + +A K L GEV +V F+ ++ Q N+ + N +E+L
Sbjct: 753 ELKSQEVA---NFNKYVAVGANLSKEGEVEEVCTFSIGVSHGGQINIAE-----NSKEKL 804
Query: 514 LKFMMDHQPHVVVLGA--VNLSCTSLKDDIYEI---IFKM--VEEHPRDVGHEMDELS-- 564
+ F++ +P + +G + + LK + + I K+ V + ++ + D+LS
Sbjct: 805 IHFLVRGRPDYITIGVGKSKHATSGLKQQLANVWSQILKVDEVSDSEQNASEQQDKLSSC 864
Query: 565 ---IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREIL 621
I E++P +Y + R S++ Q + A+A+GR+ Q PL + A +
Sbjct: 865 LSKIFLVSEAVPMVYASLR--SEEQKEQSYARRMAIAIGRFAQEPLVVYAAIACDISSTS 922
Query: 622 SWKLCPLENFLTPDEKYGMIEQVMVDVTN-QVGLDINLAIHREWQFAPLQFISGLGPRKA 680
S ++ P +N L E+ + Q M+ T G+DIN I + L I GLGP+KA
Sbjct: 923 SLEVHPFQNILNASEREFVFRQAMIFATCCYTGVDINRIIIYDHLRPLLNHIGGLGPKKA 982
Query: 681 ASLQRSL-----VRAG-AIFTRKDFVTAHGLGKKVFVNAVGFLRV--------------- 719
+ L + G A+ +RK+ + L K+VF +A GF+R+
Sbjct: 983 VVILERLKELYHIHGGKALLSRKEIIANQILDKRVFFSAAGFVRIVDPFGDKGKDSRGKQ 1042
Query: 720 --RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEH 777
R GQ + ++ L+++R+HPE+YG+A ++A+E + E + D D +++ I
Sbjct: 1043 RNRAKGQRKNELA-VNPLENSRVHPENYGIAMKIAEEALRGESEEQEHSDSDIVKV-ISE 1100
Query: 778 VRDRPDLLKTYLLDR---HIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFY 834
V RP LL+ L+ H+++ R +TL +I E + ++DWR + + FY
Sbjct: 1101 VMKRPHLLEELDLEAYADHLEKLGRGKMHDTLRIICEEFENPYRDWRKIPSPLTSKDLFY 1160
Query: 835 MISGETEDTLAEGRVVQATVRR--VQGQRAICVLESGLAGMLMKEDYSDDWRDS--ELSD 890
+I+G T D L G V AT R G +C +E + G + + + D+ S +L +
Sbjct: 1161 IITGCTPDRLRCGASVVATNCRPNAAGTGIVCQVEGEIRGYIHRNEIFDEQVSSNFDLGE 1220
Query: 891 KLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR----------------YQHCQNLDP 934
L++ L C++ S+ ++++ L CR S +RN + N DP
Sbjct: 1221 YLNQTSTLPCRVLSVNYEKFELKLSCRPSVLRNPKKIPEYKEPEFKADPFFLDFSSNFDP 1280
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+++ + ++ R + ++ HP F+NV+ +A++LL PGE IIR
Sbjct: 1281 LQPDKQPMTADDVQRERSRRMETRRKASLATSSHPLFRNVSGSKAIQLLDQTSPGEIIIR 1340
Query: 995 PSSRGPSYLTLTLKVYDGV-YAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVV 1053
PSS P + L+ KV DG+ H +++E + ++ ++ IG++ FE LDEV+
Sbjct: 1341 PSSHSPDVVVLSFKVADGLPVVHLEVLEQQQTYRGRET-----SLYYIGQEKFEALDEVI 1395
Query: 1054 DRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILT 1113
RY +P++++L+ L +RKF G + +++ + +K P ++ Y G+S +PG ++
Sbjct: 1396 GRYAEPVLANLQEALQHRKFIVGDEETLEQNCKQQKMTEPQKVAYCIGMSFRYPGRLVIA 1455
Query: 1114 YIR-STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
Y+ ++ E I + P+G++FRK + D++ L+ +F+
Sbjct: 1456 YLPGRSHVIREIITVLPQGYRFRKLIHADMNSLIDWFK 1493
>gi|425778643|gb|EKV16761.1| Transcription elongation factor spt6 [Penicillium digitatum PHI26]
gi|425784151|gb|EKV21944.1| Transcription elongation factor spt6 [Penicillium digitatum Pd1]
Length = 1411
Score = 323 bits (829), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 303/1137 (26%), Positives = 514/1137 (45%), Gaps = 105/1137 (9%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE-RTPTLKWHKVLW 121
+ + L+ L ++PFI +RK+ + +KD+ +DN+ + R L LW
Sbjct: 319 VAKMLEFLITDDWEVPFIFQHRKDYMIHAVKDMANGADPDDNSAQYNIRAEKLLNMTDLW 378
Query: 122 AIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFD----SISKSLEA 177
I D D K+ L ++ +Q Y Q LF+ ++ L A
Sbjct: 379 DIFDHDLKFRALVDKRGTIQKTYDNL-----------------QSLFNVNDSNVEDQLVA 421
Query: 178 AETEREVDDVD--LKF-------NLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVA 228
A T E+ DV L F +L+ GE E Q ++ + + +
Sbjct: 422 AATMEELQDVQDYLHFEYSSQLRDLNQVNGE-ATGETQRRKATGRSFFERVRNGKAYGFV 480
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEI 288
FG +++ S E EDP + PEE+A F F++S VL+ A+ M A E+
Sbjct: 481 RAFGITADAFAQNASKEGRRQYTEDPTQQPEELADQFVDNDFSNSSHVLKAAKSMFAEEL 540
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWL 346
+ P +RK +R + N VV T G ID H +A K+LR + L +L
Sbjct: 541 AVSPKMRKVIRQAYYMNGVVDCFRTEKGLRRIDEQHPYAEFKYLRNQQLSDIARRPEMFL 600
Query: 347 LIQKAEEEKLLQVTIKLPE-DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
+ KAEEE L+ V ++ D K L++D + SD S+ A WN R +L AL
Sbjct: 601 RMLKAEEEGLVDVRVRFENFDQFRKRLYADIE----SDNYSELADAWNRIRREVLDLALG 656
Query: 405 NF--LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVL 462
L+ VKE + ++ + E +A ++ PY+ K + PRVL
Sbjct: 657 KLEKLINRSVKEN---IRQECENHVAKECREAFSQRLDQAPYKPKGMVLG----TVPRVL 709
Query: 463 ACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF--MMD- 519
G G+ + + E VL G S V D+ D E L F ++D
Sbjct: 710 TLSTGSGQVGRDPIHWAYTEEDGRVLENGKFIDLS--VGDESRDIADGENLAAFVDLVDR 767
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFK-------MVEEHPRDVGHEMDELSIVYGDESL 572
+P V+ + + L + EI+ + EH ++ D L +V ++ +
Sbjct: 768 RRPDVIGVSGMTPETRRLYKLLSEIVDQKDLRGASYTNEHDEEIS---DPLEVVIVNDEV 824
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFL 632
RLY NS + PG VALGRYLQ+PL A+L GR+++S + P + +
Sbjct: 825 ARLYHNSPRARSDNPGFGPLTHYCVALGRYLQSPLKEYASL---GRDVVSIQFKPGQQLV 881
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAG 691
+ D +E +VD+ N VG+D+N A+ L ++ GLGPRKAA L + + + G
Sbjct: 882 SQDLLLKQLETALVDMVNLVGVDLNEAVADTATANLLPYVCGLGPRKAAHLLKIVNMNGG 941
Query: 692 AIFTRKDFV----TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
+ R + + T +G KV+ N F+ + + D LD+TR+HPE Y +
Sbjct: 942 VVNNRVELLGVNATYPAMGVKVWNNCASFVYIDFENADPDA----DPLDNTRVHPEDYDI 997
Query: 748 AQELAKEVYNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE 800
A+++A + D E D+ + D ++ E +DR + L +++ +
Sbjct: 998 ARKMAADALELD-EEDIKAETDENGTGAIMRKLFREEAQDRVNDLILEEYAEQLEKNLNQ 1056
Query: 801 NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQ 860
KR TL IR EL +++ R Y D+ F M++GET D+L G VV ++RV
Sbjct: 1057 RKRATLETIRAELQQPYEELRKHYVFLGTDDIFTMLTGETPDSLTPGMVVPIAIKRVFED 1116
Query: 861 RAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
L+ G+ ++ + + + D + + + KI + + + + RE +
Sbjct: 1117 HIEAKLDCGVDVLVAETELGVPY-DIPVRNAYQVHQTVPAKILFLNRKGFSCNVSLREDQ 1175
Query: 921 M----RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTA 976
+ R N+ + D +ER ++S QEK ++ + R+I HP F+ +
Sbjct: 1176 VSHPSRRNQDHGFGDWDE--QQEREDKESLQEKTQRGGQAM------RVIKHPLFRPFNS 1227
Query: 977 DEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIG 1036
+A + L ++ PG+ +IRPSSRG +L +T KV GVY H D++E K+++ +G
Sbjct: 1228 TQAEEFLGSQGPGDVVIRPSSRGHDHLAVTWKVAQGVYQHIDVLELDKENE-----FSVG 1282
Query: 1037 KTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTR 1095
+ LK+ G T+ DLD+++ +++ + + M+ + KF++GSK E D+ L P R
Sbjct: 1283 RVLKVGGRYTYSDLDDLIVNHVNAMAKKVSEMILHEKFQEGSKTETDQWLETYTKANPRR 1342
Query: 1096 IVYGFGISHEHPGTFILTYIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
Y F I+ ++PG F L + + + + + P+G++ +K + D+ L F+
Sbjct: 1343 SAYAFCINAKYPGYFYLCFKAGEHSRLQNWPVKVIPQGYELQKNPYPDMHALCNGFK 1399
>gi|403159913|ref|XP_003320485.2| hypothetical protein PGTG_02507 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169332|gb|EFP76066.2| hypothetical protein PGTG_02507 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1603
Score = 320 bits (820), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 278/1112 (25%), Positives = 506/1112 (45%), Gaps = 119/1112 (10%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
LD + ++PF+ M+R++ + +D R + LW H L
Sbjct: 372 LDFFLSKYFEVPFVFMHRQDYI---------TYHDPKGHDAQSRDIQFLTREELWKAHTL 422
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
K++ L +RK L +R++D +L F+ +++ E EV D
Sbjct: 423 SLKYVALLERKKGL------------KRLFD--KLGTEDDYFEECFSGIQSVE---EVAD 465
Query: 187 VDLKFNLHFP---------------------------PGEVGVDEGQYKRPKRSTKYSSC 219
+ L + P +YK+ R ++Y
Sbjct: 466 LMQWLTLKYGHRLREAQADVRDDADALADLDAEGLSGPATEAKKAVRYKKALRESRYERA 525
Query: 220 SKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC---AMFNSSQAV 276
+ ++ +F S+ +L + +DP P A F C F +
Sbjct: 526 KSTNINHLSKEFSISARELTTNFLKHDKIHKKDDPPLQPLVYAETF-CDPDTEFEEPKKA 584
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP 336
++ A+ + + +I +P ++K+VR +F ++ VV+ PT G I+ H + K+L +KP
Sbjct: 585 IEAAKFILSTDIGRDPLLKKHVRQLFRNHGVVTVAPTESGIHKINELHPYFAFKYLSQKP 644
Query: 337 LRKFE-DAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQR 395
+ +Q+L I AE+E L+ V + L + + ++ + SD S + WN+ R
Sbjct: 645 FSALKHSSQYLQIMAAEQELLVNVQVHLSPQTDRDIKTELINMFKSDDPSDESAQWNELR 704
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDE 455
E IL A+++ LLP + A++ + A+ ++ + L + + P+ + N + E
Sbjct: 705 EEILMFAIEHMLLPDAARWAKNYLKDEAEEYVAQKCADELEFRADIAPF--RPNHLFDGE 762
Query: 456 EAAPRVLACCWGPGKP--ETTFVM-LDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER 512
P V+A G G P ++ FV+ +D G D ++ N+RD ++ E
Sbjct: 763 --IPSVVAVSNGAGDPKRDSVFVIFMDRQGRFRD-------HMKLDNLRDPDPRQAFSE- 812
Query: 513 LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS-------- 564
F+ +P V+V+G + S L D+ + ++ E ++ + EL+
Sbjct: 813 ---FLKSRKPDVIVVGGFSASTYRLLGDVKTVSGELSERMKSEMQNAQGELTAEAISRLN 869
Query: 565 --IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILS 622
++ + RL + + + D+ + VAL RY+Q+PL A ++ +
Sbjct: 870 FPVIVARDDTARLNQQGKRAEDEFGELPPLGRYCVALARYVQSPLNEYAAAAS---DLTA 926
Query: 623 WKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAAS 682
P + FL + +E+ +V++ N VG+DIN A++ + LQ++ GLGPRKA
Sbjct: 927 ISFHPDQQFLPRETLQLYLERALVNIVNAVGVDINRAVNDHYYQCLLQYVCGLGPRKAQK 986
Query: 683 LQRSLVR----AGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
L +S+ G + R + +T + + K +F N GFLR+++ + + D+LDDT
Sbjct: 987 LIKSINANPHIEGTLSLRNELITENLVTKNIFYNCAGFLRIKQDDLRPNRNIDPDILDDT 1046
Query: 739 RIHPESYGLAQELA---KEVYNRDIEGDLNDDEDALEMAIE--HVRDRPDLLKTYLLDRH 793
RIHPE Y +A+++A +E+ D+ G L + +A E H + D L LD
Sbjct: 1047 RIHPEDYDVARKMAADAQELDEEDLAGQLPSQVVSDLLAAEGGHGASKLDDLN---LDDF 1103
Query: 794 IKEKKR---ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
E R + KR TLY IR EL + +Q+ R +++ + ++ F + +GE E TL++G ++
Sbjct: 1104 ADELCRLMAQKKRLTLYQIRSELQNPYQEIRAKFEPLTPEQMFDLWTGENEATLSQGAII 1163
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY 910
+ RV+ + L+SG+ G + ++Y D ++S K G + I K+R+
Sbjct: 1164 PVKITRVRDRGLAVRLDSGIEGFI-DQNYMVDEGTPDMS-KFPVGSTTQAIVMEIHKDRF 1221
Query: 911 QVFLVCRESEMRNN-RYQHCQNLDPYYHEERSSRQSEQEKARKE-KELAKKHFKERLIVH 968
V L + + Y+ D Y+ Q E +K R E K+ +R+I H
Sbjct: 1222 SVELNSQPKVVEAGATYRKKVETDQYF----DIAQMEIDKDRVESKKKPGNRRTQRIIKH 1277
Query: 969 PCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKD 1028
P F N A +A + L+ + G+ +IRPSSRG +L +T KV G+Y H D++E K ++
Sbjct: 1278 PNFHNFNAGQAEQHLANLQRGDCVIRPSSRGTDHLAVTWKVDTGIYQHIDVLELDKPNE- 1336
Query: 1029 IKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRI 1087
+ +G+ LKI G ++ DLDE++ ++ + ++ M+ + K+ KGS ++ L+
Sbjct: 1337 ----LSLGRILKIGGRYSYSDLDELIVSHVRAMARKVEEMIQHEKY-KGSYDDMSNFLKT 1391
Query: 1088 EKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
P R Y F I E G F++ + + N
Sbjct: 1392 YLMANPDRSTYAFCIDKEVAGNFLIGFKANKN 1423
>gi|388582141|gb|EIM22447.1| hypothetical protein WALSEDRAFT_32137 [Wallemia sebi CBS 633.66]
Length = 1433
Score = 320 bits (820), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 290/1164 (24%), Positives = 503/1164 (43%), Gaps = 114/1164 (9%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS--ISKSLEA 177
LW I++L +K++ L R S + T LA + D+ +
Sbjct: 265 LWKIYELYRKYVSLHIRLSGI------------------TELAEKAHIVDNYFTGTLVPL 306
Query: 178 AETEREVDDVDLKFNLHFPPGEVGV--------DEGQYKRPKRSTKYSSCSKAGLWEVAS 229
A+ E EV + ++ L P E+ + E Q+KRP +++ Y K E+
Sbjct: 307 AQDEMEVTNDLHEWLLGMYPHEIKILQDEQRSMSERQFKRPTKASAYERAKKMPSSELIK 366
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKET--PEEMASNFKCAMFNSSQAVLQGARHMAAVE 287
K + ++ L E +G P + P ++A F NS Q +L A+ + E
Sbjct: 367 KVVPTVAEVAQNLRSE-VGKLFTPPTPSLGPFDLAETFTVGSINS-QMMLSMAKLIFITE 424
Query: 288 ISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED--AQW 345
+ +P ++K+VR +VS PT G + +D H + +L+ KP+ K + Q+
Sbjct: 425 LGRDPLIKKHVRDRLTSEGIVSVLPTDKGLNKVDDQHPYNRFLYLKNKPIDKLSEDSTQF 484
Query: 346 LLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN 405
L I AE+E L+ V+I D ++ E + + ++ WN + +A +
Sbjct: 485 LSILAAEKEDLITVSIGFHPDVQEEIIDRIFEATKGEDTGEVSEAWNTFIRDAIFEAFEQ 544
Query: 406 FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEA--APRVLA 463
LL S K AR + + + +L + ++ V P+ P E P VL+
Sbjct: 545 SLLISARKYAREWLREKQEDYLAQRLTDRVSQRIDVAPF------TAPGWEKGETPSVLS 598
Query: 464 CCWGPGKPE---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDH 520
G G P V LD G LR Q D + E +
Sbjct: 599 VSAGQGDPRKDAILLVYLDEDGR-----------LREQQKIDNLVDETTMEIFSDILKRR 647
Query: 521 QPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE------------------ 562
+P VVV+G + L + E++ E D ++DE
Sbjct: 648 EPQVVVVGGMGTQTHGLYQRVLELVKTQTGEQ-IDPNSQVDEWGEPMVTDEGQQPTINPE 706
Query: 563 --LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
+++ ++ + R+Y++S+ + + K V L RY Q+PL A L G ++
Sbjct: 707 SGTPVIFVNDDIARIYQHSKRAELEFGELPLTGKYCVGLARYAQSPLNEFAAL---GEDV 763
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
+ + P + LT + +E+ ++ N +G+DIN+A+ LQF++GLGPRKA
Sbjct: 764 TAIAIDPDQRLLTNVKFLQAMEKAFINTVNHIGVDINIAVRDTHYQHLLQFVAGLGPRKA 823
Query: 681 ASLQRSLV-RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
+L R + R G I R + + K F NAV F+++ + + + D+LD TR
Sbjct: 824 QALVRRIAARGGYITNRSELAHPDLMYLKEFTNAVAFIKITQEFDSKVGDELPDVLDQTR 883
Query: 740 IHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKE 796
IHPE Y LA+++A + D E E A+ + + L LD + + +
Sbjct: 884 IHPEDYELARKMASDALELDEEDLEGQHESAVVKQLIDDKQNESKLDELNLDDYALNLLQ 943
Query: 797 KKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRR 856
+ + KR TL LIR EL++ F + R+ +K P + F ++GET+ TL+ G VV A V+
Sbjct: 944 FRGDYKRSTLNLIRDELLNPFGEDRDDFKTPENKDIFTALTGETDQTLSPGTVVPAVVKA 1003
Query: 857 VQGQRAICVLESGLAGMLMKEDYSDDWR-DSELSDKLHEGDILTCKIKSIQKNRYQVFLV 915
+ Q A L+SG+ + +D+ D + + + + +I + +QV L
Sbjct: 1004 TKPQFAYFRLDSGVDAFVSSVYATDEGDPDRRMDSIFPKATTVQGMVLNIDYDTFQVELS 1063
Query: 916 CRESEM-RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNV 974
R ++ Y+ D YY ++ E + RK+ +K + R++ HP F N
Sbjct: 1064 TRPQDLAMAPEYRKIVAEDEYYDTIKAMEDRESAQRRKQ---SKANRAPRVVDHPNFHNF 1120
Query: 975 TADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG 1034
+A++A +LL GE +IRPSS+G +L +T KV + +Y H D++E K ++
Sbjct: 1121 SAEQAEQLLEGVPRGEVVIRPSSKGSDHLVVTWKVDEDLYQHIDVLEIDKANE-----WS 1175
Query: 1035 IGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPT 1094
+G+ L+IG T+ DLDE++ ++ P+V ++ ++++ K+ ++ ++ + L
Sbjct: 1176 LGRLLRIGNATYTDLDEMLVMHVQPMVRKVEELINHEKYHGPTEDDMAKYLHDFVKANID 1235
Query: 1095 RIVYGFGISHEHPGTFILTYIRSTNP--HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRH 1152
R Y F + + PG+F+L ++ S + + + P + + L F+
Sbjct: 1236 RSNYAFCLDRKDPGSFVLGFMASAKSALNRWSVQVTPGMYVLNGAQLPTVADLCRAFKLQ 1295
Query: 1153 IDD---------PQGDSAPSIRSVAAMVPMRSPANGGSTASAGSG----WGGS--TNEGG 1197
D G P R+PA G +A+ G WGG T G
Sbjct: 1296 YADILKNPRSRLANGGKTPFAGGRTPATGARTPARGTWSATPAQGKASAWGGGNRTPAAG 1355
Query: 1198 WNRDRSSTPGSRTGRNDYRNGGGR 1221
W R+ G GR N GGR
Sbjct: 1356 WGGGRTPHHG---GRTPAINHGGR 1376
>gi|407918776|gb|EKG12040.1| hypothetical protein MPH_10822 [Macrophomina phaseolina MS6]
Length = 1424
Score = 319 bits (817), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 291/1133 (25%), Positives = 518/1133 (45%), Gaps = 95/1133 (8%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
+ + L+L++++ L++PFI +RK+ + +Q+++ D N +R T LW
Sbjct: 331 VRKVLELMNIEDLEVPFIFNHRKDYLIHSSAQQDQDDI--DGNAGPQRLLT---QGDLWE 385
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
I +LD K+ L +++ AL Y E + I D + +F+++ E+ E +
Sbjct: 386 IFELDLKFRALSEKREALVKTY-----ENLKAIAD-----VQDPVFETLLAKAESIEEIQ 435
Query: 183 EVDDVDLKFNLHFPPGEVGVDE-----GQYKRPK-RSTKYSSCSKAGLWEVASKFGYSSE 236
++ D + F +V E G KR + ++ + + ++ + G + +
Sbjct: 436 DIQDY-IHFTYSAQLKDVNTMEAEATPGVQKRTRGANSVFERIRASRVYNLVRAIGITPD 494
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNF-KCAMFNSSQAVLQGARHMAAVEISCEPCVR 295
L + EDP+E PE+MA N + +S VL+ A+ M A E+ P +R
Sbjct: 495 DYAKNLQKDGHRVYPEDPQEMPEDMADNLLDPPEYQTSAVVLRSAKAMFAEELVMSPRMR 554
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEE 353
+R F + T G I H + K+LR + L ++ KAE+
Sbjct: 555 SVMRRTFYTAGLFDVHRTEKGLRKITEDHPYYEFKYLRNQEYTAMARRPELFLRMLKAED 614
Query: 354 EKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVK 413
E +++V +KL + + D + SDG S A WN R IL AL L + K
Sbjct: 615 EGMVEVKVKL--QNYQTIKEDFQAMIKSDGTSDRATEWNKFRTSILDMALPK-LERIIAK 671
Query: 414 EARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PGK 470
+ + ++ L + K+ PY+ K + PRVLA G PG+
Sbjct: 672 GVKETVKAECENALARQCKDRFAEKLDQAPYKPKGMQLG----TVPRVLALSNGNGIPGR 727
Query: 471 PETTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA 529
+ +D G V++ G + LR N D E L++ + +P V+ +
Sbjct: 728 DAVCYAWVDEEGRVLE---QGKFSDLRPGNKEKYIPDAKDIEALVELVQRRKPDVIGVSG 784
Query: 530 VNLSCTSLKDDIYEII----FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
++ L D+ +I+ + + D + + L +V ++ + RLY S S+ +
Sbjct: 785 FSVETRKLYKDLQQIVEDHDLRCADFEDEDGNEKSERLEVVMVNDEVARLYHTSDRSNAE 844
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
PG VK +AL R+LQ+PL A L GR+I+S P + L D+ +E M
Sbjct: 845 HPGTAPLVKYCIALARFLQSPLKEYAAL---GRDIVSISFDPNQILLPQDKLMKYLEMAM 901
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV---- 700
VD+ N VG++IN A+ + L ++ GLGPRKA L + + + + TR + V
Sbjct: 902 VDIVNLVGVEINEAMGDPYLANLLPYVCGLGPRKAQQLVKVINLNRQDVATRDELVGDPD 961
Query: 701 --TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
+G KV++N FL + S D LD TR+HPE Y L +++A +
Sbjct: 962 KGILPAVGPKVWMNCASFLYINDDPSEPES----DYLDGTRVHPEDYDLGRKMAADALEM 1017
Query: 759 DIEGDLNDDED-----------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLY 807
D E D+ ++D E A E V D +L+ Y ++ + + KR TL
Sbjct: 1018 D-EEDIKAEQDENGPGAVVKRLIREDATEKVNDL--VLEEYA--EQLEAQFHQRKRATLE 1072
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
IR EL +++ RN++ + DE + M++GET ++L EG +V +RRV L+
Sbjct: 1073 TIRAELQVPYEELRNKFTYMTSDEIYTMLTGETRESLTEGMIVPVKIRRVFPDHIEGRLD 1132
Query: 868 SGLAGMLMKEDYSDDW---RDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN 924
G+ + + ++ ++ R + + K+ + + + E ++++
Sbjct: 1133 CGMEAICNEPEFPNNVGGERGIDPRQVFQANQTVQAKVTFLNRKALSCQVSFNEKQLKDG 1192
Query: 925 RYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFK----ERLIVHPCFQNVTADEAM 980
++H +R +QE+A K+ E +K K +R+I HP F+ A +A
Sbjct: 1193 YHRHIDR-------QRGEWDDKQEEADKDAEAKEKESKTGRAQRVIKHPLFRPFNAAQAE 1245
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
+ L ++ G+ +IRPSS+G +L +T KV D +Y H D++E K+++ +G+TLK
Sbjct: 1246 EFLGSQGRGDVVIRPSSKGLDHLAVTWKVSDNIYQHIDVLELDKENE-----FSLGRTLK 1300
Query: 1041 I-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYG 1099
I G+ T+ DLDE++ ++ + + M++ K++ GSKA+ ++ L P R +Y
Sbjct: 1301 IGGKYTYSDLDELIVLHVKAMAKKVDEMMTDEKYQSGSKAQTEQWLTTYTEANPRRSMYA 1360
Query: 1100 FGISHEHPGTFILTYIRSTN-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
F I+ + PG F L + P + + + P F+ +K + D+ L F+
Sbjct: 1361 FCINPKFPGYFHLCFKAGQQAPLASWPVKVIPNAFELQKNHYPDMRALKNGFK 1413
>gi|367036449|ref|XP_003648605.1| hypothetical protein THITE_2106254 [Thielavia terrestris NRRL 8126]
gi|346995866|gb|AEO62269.1| hypothetical protein THITE_2106254 [Thielavia terrestris NRRL 8126]
Length = 1416
Score = 319 bits (817), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 290/1127 (25%), Positives = 515/1127 (45%), Gaps = 94/1127 (8%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERT---PTLKWHKV 119
I + L+ + +++P++ +R++ + K +N+ D+ D E T L
Sbjct: 326 IYKVLEFFIIDGVEVPYVFQHRRDYLIHAKKI--RNQDGRDHPDAPEYTVDAEKLLTQDD 383
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I +LD K+ L ++++AL+ + E + + + + + EAA
Sbjct: 384 LWRILELDIKFRSLVEKRNALEKSFAGLKEA-----------GVEDHILEEMIR--EAAT 430
Query: 180 TEREVDDVDLKFNLHFPPGEVGVD------EGQYKRP-KRSTKYSSCSKAGLWEVASKFG 232
E E+ D+ N + + + KRP ++ + ++ + G
Sbjct: 431 LE-ELQDLQDYLNFQYSAQLKDIAAMGNGASKEVKRPGAKTALFERIRRSKAYNFVRALG 489
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
S ++L E +D + P ++A + F + V+ AR M A E+ P
Sbjct: 490 ISPDRLAKNALREGKKVSSDDDAKLPMDLADSLVDDDFPTGSQVVTAARQMYAEELFMSP 549
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQK 350
+RK+ R F VS T G ID H + +K+L +R +L + K
Sbjct: 550 RMRKHFRIQFYAMGCVSCHRTEKGLRKIDEAHPYYEIKYLINHTIRDLAVRPEIFLKMMK 609
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPS 410
AE+E L++V ++L + + + SD S+SA WN +R+ +L A L
Sbjct: 610 AEDEGLVEVQLRLENE--REFRRQLYNEFASDNFSESADAWNSERQKVLDIAFSK-LEKV 666
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK 470
+ K + + + LL + + ++ P + K + PRVL G G
Sbjct: 667 IAKGVKDSLRTACQEELLKTCREEYFKRLDQAPLKPKGMVLG----TTPRVLTLSNGMGD 722
Query: 471 PE---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
P + ++ G VV+ + L RD+ + E + + P VV +
Sbjct: 723 PNRDPIYWTWVEEDGRVVE--HGKFINL----ARDESQR----ELFAELVRRRNPDVVGV 772
Query: 528 GAVNLSCTSLKDDIYEIIFK---MVEEH--PRDVGHEMDELSIVYGDESLPRLYENSRIS 582
+ L DI II + M E+ P + D L +V ++ + RLY++S +
Sbjct: 773 SGFSADTHRLIKDIEGIISEKGLMGPEYDDPEANEYRSDLLEVVVVNDEVARLYKDSPRA 832
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE 642
+ P + +AL RY+QNP+ A L GR++ S + P + +L D+ Y +E
Sbjct: 833 VAEHPTLNSLSRYCIALARYMQNPMKEYAAL---GRDVTSLLIHPYQQYLPQDKLYKHLE 889
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTA 702
MVD+ N G+D+N AI + L +++GLGPRKA L + + G + T +D +
Sbjct: 890 TAMVDIVNLCGVDLNEAIGDPYTANLLPYVAGLGPRKAQLLIKGVNANGGVVTSRDELVG 949
Query: 703 HG-------LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LG +V+ NA FL + S D LD+TRIHPE Y LA+++A +
Sbjct: 950 DPERHKIPVLGPRVWNNAASFLYIEHDSTNPDS----DPLDNTRIHPEDYDLARKVAADA 1005
Query: 756 Y---NRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLI 809
D++ +++++ + D + + +L+ + ++ +RE KR TL I
Sbjct: 1006 LGLDEEDVKAEVDENGPGAIVRKLFKEDEQEKVNELILEEYAEQLEREYQQRKRATLEAI 1065
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
R EL+ +++ R + S D+ F M +GET D+L EG +V VR V+ AI L+ G
Sbjct: 1066 RAELMGPYEELRKNFAVLSTDQIFTMFTGETRDSLCEGMIVPVNVRVVKDDFAIVKLDCG 1125
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN---NRY 926
+ G + E + +R S + D L G K+ I + + L RE E+R Y
Sbjct: 1126 IEGRV--ESHEVSYRHS-IKDLLQVGQTAQAKLIDINRKDFVCKLTMREEELRRPFRRHY 1182
Query: 927 QHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAK 986
+ ++ Y EE +++E+ R++ ++ + +R+I HP F+ + +A + L
Sbjct: 1183 NYARDQWNYKLEE-----ADREELREKDKVTGR--TQRVIKHPLFKPFNSTQAEEYLGGL 1235
Query: 987 EPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED-T 1045
PGE +IRPSS+G +L +T KV DGVY H D++E KD++ +GK L++G T
Sbjct: 1236 PPGEVVIRPSSKGNDHLAVTWKVADGVYQHIDVLELQKDNE-----FSVGKVLRVGNKYT 1290
Query: 1046 FEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHE 1105
+ DLDE++ ++ + ++ ++ + KF+KGS+A++++ L P R Y F + +
Sbjct: 1291 YTDLDELIVEHVKAMAKKVEELMQHEKFQKGSRADLEKWLTTYIDANPNRSTYAFCLDTK 1350
Query: 1106 HPGTFILTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
HPG F L + R + + + + P F+ K + D+ L F+
Sbjct: 1351 HPGYFYLCFKASRGSKVNAWMVRVIPHAFELLKSQYPDMRALCNGFK 1397
>gi|212544912|ref|XP_002152610.1| transcription elongation factor SPT6, putative [Talaromyces marneffei
ATCC 18224]
gi|210065579|gb|EEA19673.1| transcription elongation factor SPT6, putative [Talaromyces marneffei
ATCC 18224]
Length = 1457
Score = 317 bits (813), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 308/1203 (25%), Positives = 532/1203 (44%), Gaps = 124/1203 (10%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RK G E +E+ WI N +L R ++ R + + L+
Sbjct: 299 RKPYKGVVLSDEEFHEEAVWISNLMLL--------RKQHVIEDNLQEPFQRA-VAKVLEF 349
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE-RTPTLKWHKVLWAIHDLDK 128
+ ++PFI +RK+ + K + N + +F R L LW I + D
Sbjct: 350 MVTDDFEVPFIFQHRKDYLIHAAKVPASPDPGNPDAPEFVIRAQKLLNMNDLWDIFEHDL 409
Query: 129 KWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD 188
K+ ++ LQ Y + E + + ++ D + L AA T E+ DV
Sbjct: 410 KFRAYIDKRHTLQKTYDRLQE-----------IGVKDEIVDEM---LAAATTMEELQDVQ 455
Query: 189 LKFNLHFPP-----------------GEV-GVDEGQYKRPKR--STKYSSCSKAGLWEVA 228
+ + P GEV G GQ R K +T + K+ ++ +
Sbjct: 456 EYLHFQYGPQIKDLSLISEETNGEVDGEVNGQTNGQTTRRKAGANTFFERIRKSNVYSLV 515
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEI 288
FG +++ +S + G EDP++ PEE+A +++S + L+ A+ M E+
Sbjct: 516 RSFGITADAFAQAVSQNRRGQYTEDPEKPPEELADTALDTDYSNSTSALRAAKAMFVEEL 575
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLI 348
P +RK +R N VV T G ID H + K+LR + L L +
Sbjct: 576 VMNPRMRKVIREQCYRNGVVDCYRTEKGLRRIDEQHPYYEFKYLRNQQLTDIARRPELFL 635
Query: 349 Q--KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
KAEEE L+ VT+ +L + H SD S A WN +R +L AL
Sbjct: 636 SMLKAEEEGLINVTVTF--QNLERYRQSLYSHIESDSQSDVADAWNRERREVLDTALGR- 692
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
L+ M + + + ++ + E + NK+ PY+ K + PRVLA
Sbjct: 693 LVKLMTRSVKENIRQNCENHVTKEVREVFSNKLDQAPYKPKGMVLG----TVPRVLAFSN 748
Query: 467 GP----GKPETTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQ 521
G G +V ++ G + G L+ ++ D ++ +
Sbjct: 749 GDAPVNGDHFIHWVWVEEEGRPQE---NGKFAKLQIGDLERGIPDGEDVAAFVELVRRRV 805
Query: 522 PHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH-----PRDVGH------EMDELSIVYGDE 570
P V+ + + L Y+++ +V+ P VG D L ++ ++
Sbjct: 806 PDVIAVSGRSPETRKL----YKLLCDLVDRKDLRAAPYTVGEGKEAKEVADRLEVIMVND 861
Query: 571 SLPRLYENSRISSDQLPGQKGNVKR-AVALGRYLQNPLAMVATLCGPGREILSWKLCPLE 629
+LY NS ++ P ++ + + RYLQNPL A L G++++S + P +
Sbjct: 862 ETAQLYANSERATVDFPVKQNYLTSYCCGIARYLQNPLKEYAAL---GKDLVSIQFTPGQ 918
Query: 630 NFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-V 688
+L D +E +VD+ N G+DIN A+ LQ++ GLGPRKA+ L + + +
Sbjct: 919 RYLAEDIVAKQLESALVDMVNLCGVDINEAVSDPATQNLLQYVCGLGPRKASHLVKIVNM 978
Query: 689 RAGAIFTRKDFVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
G + R + + +G KV+ N FL + + D LD+TR+HPE
Sbjct: 979 NGGIVNNRVELLGVEAQYPAMGVKVWNNCASFLYLDWENVETDA----DPLDNTRVHPED 1034
Query: 745 YGLAQELAKEVYNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEK 797
Y +A+++A + D E D+ + D ++ + ++DR + L +++
Sbjct: 1035 YDIARKMAADALELD-EEDIKAETDESGPGAIVRKLLKDDLQDRVNDLILEEYAEQLEKN 1093
Query: 798 KRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
+ KR TL IR EL +++ R + P+ DE F M++GET +TLAEG VV +V+R+
Sbjct: 1094 LNQRKRATLETIRAELQQPYEELRKPFVFPTTDEIFTMLTGETNETLAEGMVVPMSVKRI 1153
Query: 858 QGQRAICVLESGLAGMLMKEDYSD--DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLV 915
L+ G+ ++ + D +D D L ++H+ + KI + K +Q +
Sbjct: 1154 AQDHIEGKLDCGVEVLVSESDITDRHDIPPRALF-QIHQS--VQGKILYLNKKTFQCNMT 1210
Query: 916 CRESEMRNNRYQ-----HCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPC 970
RE ++ YQ H D +E+ R+ QEKA+ E R+I HP
Sbjct: 1211 LREDKVSKG-YQRPIEKHRGEWDD--RQEQEDRELLQEKAKTESRFV------RVIKHPL 1261
Query: 971 FQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIK 1030
F+ + +A + L G+ +IRPSS+GP +LT+T KV D VY H D++E K+++
Sbjct: 1262 FRAYNSKQAEEYLGGMNRGDCVIRPSSKGPDHLTVTWKVADSVYQHIDVLELDKENE--- 1318
Query: 1031 SLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEK 1089
+G+ LKI G+ T+ DLDE++ ++ + + M+S+ K++ G+KA+ ++ L
Sbjct: 1319 --YSVGRILKIGGKYTYSDLDELIVSHVQTMARKVDEMMSHEKYQSGTKADTEKWLTTYT 1376
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVA 1147
P R VY F I+ ++PG F L + N + + + P+GF+ ++ + D+ L
Sbjct: 1377 MANPKRSVYAFCINPKYPGYFFLCFKAGQNAALQSWNVKVIPQGFELQRNPYPDMRALCN 1436
Query: 1148 YFQ 1150
F+
Sbjct: 1437 GFK 1439
>gi|428167103|gb|EKX36067.1| hypothetical protein GUITHDRAFT_117736 [Guillardia theta CCMP2712]
Length = 1438
Score = 316 bits (810), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 303/1079 (28%), Positives = 481/1079 (44%), Gaps = 151/1079 (13%)
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
DIPFIA YRKE P L+ LW I+DLD ++ L+
Sbjct: 426 FDIPFIAHYRKEYW----------------------KPELRAED-LWTIYDLDARYCFLK 462
Query: 135 KRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
+RK L+ + + S + + A + + + +E +E E
Sbjct: 463 QRKEQLKLNLEAANDTASLNVLQK---AFSMEELSDVKAFMELRNSEAE----------- 508
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
E V++ +KRP + ++Y C KAG+ ++ +F + +L L+ K+ DP
Sbjct: 509 ----EEQVEQKGFKRPVKYSRYRVCKKAGITKILERFVLNPVKLAENLAGYKVHTP-PDP 563
Query: 255 KETPEEMASNF----KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS-IFMDNAVVS 309
E P E ++ + A+L R AA EI+ +P +R+YVR F+ +A V+
Sbjct: 564 AEGPVEFLIDYVEDAREYGLQDVNALLSAIRFSAAKEIAADPVIRRYVREEFFLRSATVT 623
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
T G+ + ++ H + R+ P R D +L I K EK L V I++ S +
Sbjct: 624 CSETKQGEDSGETIHH--EFRNYRQVPDRDIGDEDFLTIMKCRSEKYLNVEIRMDPRSHD 681
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
+L + Y SD + ++ WND R ILK+AL+ L P+M + + +AK +
Sbjct: 682 RLLDELIRCYKSDEQNSCSEEWNDLRVGILKEALETNLYPTMERMLVEVRQRKAKDRVGK 741
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLF 489
+ L N++ V PY + D TP E ++A C+ +P + V+++ GEVV
Sbjct: 742 QMQMELENQLRVPPYVYRSVDGTP--ETPKNIMALCY--AEP-SEIVVINQQGEVVSYKS 796
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA-VNLSCTSLKDDIYEIIFKM 548
S N + K N+ +L+ F+ + +P V+V+G+ L C +LK ++
Sbjct: 797 INLSVPFSGNHINAAFKDNEAHQLMSFLDEQRPDVIVIGSGGGLKCRTLKAQFERLVSAC 856
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
E G + ++ ++S+ Y +S S + P AV+L R LQ+PL
Sbjct: 857 ESE-----GILHRTIDVLLSEQSVAYKYSHSPRSMQEFPRYPPTRLMAVSLARKLQDPLR 911
Query: 609 MVATLC-GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
++ LC G +ILS L L+ L E+ ++ ++V N VG+DINLA ++ F
Sbjct: 912 ELSGLCIGLSEDILSLNLHQLQGMLDKHERVKFTQRAFINVVNDVGVDINLAADKQIIFG 971
Query: 668 -PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFV---TAHGLGKKV-FVNAVGFLRVRRS 722
LQF++GLGPRKA L R + + G + R + + K+V F NA F+++ ++
Sbjct: 972 NTLQFVAGLGPRKAQELLRIISQYGCVQYRNALLEDRNVRTVFKEVTFYNASAFMKITKN 1031
Query: 723 ------------------GQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDL 764
QA + Q L+ TRIHPESY A+++ + E D
Sbjct: 1032 TSMWMDDLEVGQYKDHEENQAKWNEQGGGPLETTRIHPESYRFARKMISDALEE--EDDW 1089
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWR 821
N AL E R + L L+ + I + E K ETL IR E+++ F D R
Sbjct: 1090 NLLVRALHPDKELHRQISEALWEQDLESYGKIIYQSTGERKTETLQDIRTEILNPFHDSR 1149
Query: 822 NQYK--------EPSQDEEFYMISGETEDTLAEG--------RVVQATVRR--------- 856
+ E + EF +++GE++ +G +VV V +
Sbjct: 1150 KLEQLDDGLLPWELDKRSEFNLLTGESDRVKPDGSKVSTLKDKVVHVRVAKLVRPHSRSE 1209
Query: 857 ------VQGQRAICVLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDILTCKIKSIQKNR 909
+ + IC LE+GL G+L + ++ D D L K+ E DIL+C I ++
Sbjct: 1210 DPDAPPLPPYKIICKLENGLIGVLDEMNFGDTDADKRTLQSKVKENDILSCMIVDVKYEE 1269
Query: 910 YQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKK--HFKERLIV 967
+ V L RES +R + EK K++ KK + RLI
Sbjct: 1270 FSVDLTARESLIR-----------------------KVEKVMKKEVKGKKAGQIRTRLID 1306
Query: 968 HPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHK 1027
HP F NV +A +LL +E GE IIRPSS+G L++T KV D I
Sbjct: 1307 HPSFSNVPRMKARRLLEEREAGEFIIRPSSQGLDTLSVTRKVCDAPIGDDGAIMPVYQEV 1366
Query: 1028 DIK-----SLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEV 1081
IK S +GK L+I +FE+LDE++ YI+ L SH M+ + KF G A V
Sbjct: 1367 QIKMFEQPSPYELGKRLQIENRSFENLDELIIGYIEVLGSHEAKMIEHAKFCNGEAAVV 1425
>gi|406868731|gb|EKD21768.1| SH2 domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1405
Score = 315 bits (808), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 287/1132 (25%), Positives = 529/1132 (46%), Gaps = 100/1132 (8%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I + L+ + ++++P++ +RK+ + K +++ N +D L LW
Sbjct: 324 IGKVLEFFVVDEVEVPYVFQHRKDYLIHAKKTRIRDK--NGQDDYVVSAEKLLNQDDLWR 381
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLA--LNQQLFDSISKSLEAAET 180
+ +LD K+ L ++++ L+ + YD +LA ++ + +++ L A T
Sbjct: 382 VLELDLKFRALIEKRNVLE------------KTYDNLKLAAGVDDPMVEAM---LPMAVT 426
Query: 181 EREVDDVD--LKFNLHFPPGEVGVDEGQYKRPKR----STKYSSCSKAGLWEVASKFGYS 234
E+ D+ + F ++ G+ K +R S+ Y K + + +G +
Sbjct: 427 MEELQDIQDFIYFQYSSEIKDLAATNGEVKEKRRPGGKSSMYDRIRKGKAYNLVRAYGIT 486
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNF-KCAMFNSSQAVLQGARHMAAVEISCEPC 293
+ + E ED TP ++A + + F + +LQ AR M A E+ P
Sbjct: 487 PDLVAQNALKEGRKQYAEDSSLTPIDLADSLVHESEFGTGDEILQAARQMFAEELFMNPR 546
Query: 294 VRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KA 351
+RK+ R + VV T G ID H + +K+L+ + + + ++ KA
Sbjct: 547 MRKHFRMSYYMMGVVDCRRTDKGLRKIDEQHPYYELKYLKNQTFSDIANKPEIFLKMLKA 606
Query: 352 EEEKLLQVTIKL--PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLP 409
EEE L++V + L ++ +LFS+ + SD S+ A WND+R+ +L A L
Sbjct: 607 EEEGLIEVKVSLQNEQEFRKQLFSE----FASDNFSELADAWNDERQKVLDLAFTK-LEK 661
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG-- 467
+ K + M + +L + K+ PY+ + PRVLA G
Sbjct: 662 VITKGVKESMRTECQDSVLKICREDYSKKLDQAPYKPMGMMLG----TIPRVLALSNGDM 717
Query: 468 -PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
P + + ++ G V++ LT R++ S+ E+ ++ + +P V+
Sbjct: 718 DPARDSVCWAWVEEDGRVLEHGKFDNLT------RNETSR----EQFVELIQRRKPDVLG 767
Query: 527 LGAVNLSC----TSLKDDIYEIIFKMVEEHPRDVGHEMDE-LSIVYGDESLPRLYENSRI 581
+ ++ SL+D + E + E + G E E L I+ ++ + RLY++S
Sbjct: 768 VSGFSVDTHKLIASLRDLVEERGLRGAEFEDTETGDERSEPLEIIVVNDEVARLYKDSAR 827
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI 641
++ P K VAL +YLQNP+ A L GR+I+S P + L ++ +
Sbjct: 828 AAIDHPTFPALTKYCVALAKYLQNPMKEYAAL---GRDIVSLSFHPCQQLLPEEKLRKQL 884
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV 700
E MVD+ N G+DIN AI + A L ++ GLGPRKA ++ +++ G + TR + V
Sbjct: 885 ETAMVDMVNLCGVDINEAIADSYTAALLPYVCGLGPRKATAVLKTINANGGVVNTRDELV 944
Query: 701 TAHGLGK------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
GK +V+ N FL + + SS+Q D LD+TR+HPE Y L +++A +
Sbjct: 945 GDPDSGKLPVVGPRVWNNCASFLSI----EYDSSNQASDYLDNTRVHPEDYELGRKMAAD 1000
Query: 755 VYNRDIEGDLNDDEDALEMAIEHVR-----DRPDLLKTYLLDRHIKEKKR---ENKRETL 806
D E + ++ AI VR D + + +L+ + ++ +R + KR TL
Sbjct: 1001 ALELDEEDVKAEVDEGGPGAI--VRKLIKGDDQEKVNDLILEEYAEQLERNFNQRKRATL 1058
Query: 807 YLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVL 866
IR EL +++ R + + +E F M++GET ++L EG +V +R + I L
Sbjct: 1059 ETIRAELQQPYEELRRNFSILTDNEIFTMLTGETSESLCEGMIVSVNIRVAKEDFIIAKL 1118
Query: 867 ESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR---N 923
+SG+ G + +++ SD D+ L+ G K+ + ++ + L R+ +R
Sbjct: 1119 DSGIEGRVEQQEGSDTG-DTFLNRIFSVGQTTQAKLLELDRHNFSARLSLRQQMLRIPFR 1177
Query: 924 NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLL 983
R H DP + ++ ++E K++ + +R++ HP F+ + +A + L
Sbjct: 1178 KRIDH----DPGSWDSFQEQKDKEELREKDRATGRT---QRVVNHPLFRPFNSTQAEEYL 1230
Query: 984 SAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGE 1043
++ G++++RPSS+G +L +T KV DGVY H D++E K+++ +G+ L+IG
Sbjct: 1231 GSQSAGDAVVRPSSKGNDHLAVTWKVADGVYQHIDVLELQKENE-----FSLGRILRIGN 1285
Query: 1044 DTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGIS 1103
+ DLDE++ ++ + + ++ + KF+ GS+A+ ++ L P R VY F +
Sbjct: 1286 VNYTDLDELIVDHVKAMSKKVAEIMDHDKFQSGSRADTEKWLTTYTEANPKRSVYAFCLD 1345
Query: 1104 HEHPGTFILTYIRST--NPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ-RH 1152
HPG F L + P + + PK F+ +K + D+ L F+ RH
Sbjct: 1346 TRHPGYFHLCFKAGHLGRPQAWPVRVIPKAFELQKSQYPDMRALCNGFKIRH 1397
>gi|242814119|ref|XP_002486307.1| transcription elongation factor SPT6, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714646|gb|EED14069.1| transcription elongation factor SPT6, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1439
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 307/1214 (25%), Positives = 533/1214 (43%), Gaps = 144/1214 (11%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RK G E +E+ WI N +L R ++ R + + L+
Sbjct: 279 RKPYKGVVLSDEEFREEAIWISNLMLL--------RKQHVVEDNLQEPFQRA-VAKVLEF 329
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE-RTPTLKWHKVLWAIHDLDK 128
+ ++PFI +RK+ + K + +N + +F R L LW I + D
Sbjct: 330 MVTDDFEVPFIFQHRKDYLIHAAKVPASPDPSNPDGPEFVVRAQKLLNMNDLWDIFEHDL 389
Query: 129 KWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD 188
K+ ++ LQ Y + E + + ++ D + L AA T E+ DV
Sbjct: 390 KFRAYIDKRHTLQKTYDRLQE-----------IDVKDEIVDEM---LTAATTMEELQDVQ 435
Query: 189 LKFNLHFPP-------------------GEV-GVDEGQYKRPKRSTK--YSSCSKAGLWE 226
+ + P GEV G GQ R K + K+ ++
Sbjct: 436 EYLHFQYGPQIKDLSLNSEETNGNGEADGEVNGQTNGQTTRRKAGANSFFERIRKSNVYS 495
Query: 227 VASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAV 286
+ FG +++ S + G EDP++ PEE+A +++S + L+ A+ M
Sbjct: 496 LVRSFGITADAFAQAASQNRRGQYAEDPEKPPEELADTALDTDYSNSTSALRAAKAMFVE 555
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWL 346
E+ P +RK +R N VV T G ID H + K+LR + L L
Sbjct: 556 ELVMNPRMRKVIREQCYRNGVVDCYRTEKGLRRIDEQHPYYEFKYLRNQQLTDIARRPEL 615
Query: 347 LIQ--KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
+ KAEEE L+ VT+ + + H SD S+ A WN +R +L AL
Sbjct: 616 FLSMLKAEEEGLINVTVTF--QNFERYRQSLYSHIESDSQSEVADAWNRERREVLDTALG 673
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
L+ M + + + ++ + E + NK+ PY+ K + PRVLA
Sbjct: 674 R-LVKLMTRSVKENIRQNCENHVTKEVREVFSNKLDQAPYKPKGMVLG----TVPRVLAF 728
Query: 465 CWGP----GKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER-------- 512
G G +V ++ G +N + + + D ER
Sbjct: 729 SNGDAPVNGDHFIHWVWVEEEGRP------------QENGKFAKLQIGDPERGIPDGEDV 776
Query: 513 --LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH-----PRDVGH------E 559
++ + P V+ + + L Y+++ +V+ P VG
Sbjct: 777 AAFVELVRRRVPDVIAVSGRSPETRKL----YKLLCDLVDRKDLRAAPYTVGEGKESKEV 832
Query: 560 MDELSIVYGDESLPRLYENSRISSDQLPGQKGNVK-RAVALGRYLQNPLAMVATLCGPGR 618
D L ++ ++ +LY NS ++ P + + + RYLQNPL A L G+
Sbjct: 833 SDRLEVIMVNDETAQLYANSERATVDFPVKPSWLTCYCCGIARYLQNPLKEYAAL---GK 889
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
+++S + P + +L+ D +E +VD+ N G+DIN A+ LQ++ GLGPR
Sbjct: 890 DLVSIQFTPGQRYLSEDIVAKQLESALVDMVNLCGVDINEAVSDTATQNLLQYVCGLGPR 949
Query: 679 KAASLQRSL-VRAGAIFTRKDFVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFID 733
KA+ L + + + G + R + + +G KV+ N FL + + D
Sbjct: 950 KASHLVKIVNMNGGIVNNRVELLGVEAQYPAMGVKVWNNCASFLYLDWENVETDA----D 1005
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLK 786
LD+TR+HPE Y +A+++A + D E D+ + D ++ + ++DR + L
Sbjct: 1006 PLDNTRVHPEDYDIARKMAADALELD-EEDIKAETDESGPGAIVRKLLKDDLQDRVNDLI 1064
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
+++ + KR TL IR EL +++ R Q+ P+ DE F M++GET +TLAE
Sbjct: 1065 LEEYAEQLEKNLNQRKRATLETIRAELQQPYEELRKQFVFPTTDEIFTMLTGETNETLAE 1124
Query: 847 GRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSD--DWRDSELSDKLHEGDILTCKIKS 904
G VV +++R+ L+ G+ ++ + D SD D L ++H+ + KI
Sbjct: 1125 GMVVPMSIKRIAQDHIEGKLDCGVEVLVSESDISDRHDIPPRALF-QIHQS--VQGKILY 1181
Query: 905 IQKNRYQVFLVCRESEMRNNRYQ-----HCQNLDPYYHEERSSRQSEQEKARKEKELAKK 959
+ K + + RE ++ YQ H D +E+ + QEKA+ E
Sbjct: 1182 LNKKTFTCNMTLREDKVSKG-YQRPIEKHRGEWDD--RQEQEDHELLQEKAKTESRFV-- 1236
Query: 960 HFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDI 1019
R+I HP F+ + +A + L + G+ +IRPSS+GP +LT+T KV DGVY H D+
Sbjct: 1237 ----RVIKHPLFRAYNSKQAEEYLGGQSRGDCVIRPSSKGPDHLTVTWKVADGVYQHIDV 1292
Query: 1020 IEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSK 1078
+E K+++ +G+ LKI G+ T+ DLDE++ ++ + ++ M+S+ K++ G+K
Sbjct: 1293 LELDKENE-----YSVGRILKIGGKYTYSDLDELIVSHVQAMARKVEEMMSHEKYQSGTK 1347
Query: 1079 AEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEY--IGLYPKGFKFRK 1136
A+ ++ L P R VY F I+ ++PG F L + N + + + P+GF+ ++
Sbjct: 1348 ADTEKWLTTYTMANPKRSVYAFCINPKYPGYFFLCFKAGQNASLQSWNVKVIPQGFELQR 1407
Query: 1137 RMFEDIDRLVAYFQ 1150
+ D+ L F+
Sbjct: 1408 NPYPDMRALCNGFK 1421
>gi|401883330|gb|EJT47544.1| hypothetical protein A1Q1_03603 [Trichosporon asahii var. asahii CBS
2479]
Length = 1522
Score = 315 bits (806), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 289/1172 (24%), Positives = 533/1172 (45%), Gaps = 111/1172 (9%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+++ +Q L++P++ Y K + +L+ Q+ V + D+ LW +++L
Sbjct: 339 LNMMFVQHLEVPYLWHY-KRDSFGVLEAQGQSSVQFLDGDE------------LWELYNL 385
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS-KSLEAAETEREVD 185
+K+ + +R +L+ ++K +E + DE L + L ++ +++E A +
Sbjct: 386 GQKYRAIWERVQSLKEQWRK-IKERKPDLEDEY---LEKTLLSTVCLRNIETAAEGADWL 441
Query: 186 DVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE 245
L E +EG + P+R + + ++A FG S + L + E
Sbjct: 442 AYTYASELRAIKEEAAAEEGTKRLPERQSG-GKIRDGPVLKLAEAFGISVPTVALVFN-E 499
Query: 246 KMGD--ELEDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI 301
GD L +P++ P +A F + F + + L+ A+ + + + +P +R+ R
Sbjct: 500 TDGDPASLSNPEKMPLALAEEFSGEGTPFYTPEDALKAAKEILINDFAHDPTIRQQARDF 559
Query: 302 FMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED-AQWLLIQKAEEEKLLQVT 360
V+ PT G ++ID++H + K+L +KP+ F+D AQ+L + KAEEE L+ ++
Sbjct: 560 VEALGTVTVTPTERGMASIDAYHAYYPFKFLTDKPIPNFKDSAQFLHLLKAEEEGLITIS 619
Query: 361 IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMS 420
I PE+S + S S S+ A WN +R ++ A LP+ + + +
Sbjct: 620 ISAPEESTKEFISALSRCAQSKDYSELAVSWNAERGQVIDTAFRKHYLPAACRWIKEQLR 679
Query: 421 GRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG--KPETTFVML 478
A++W+ + L ++ +V P+ N + P E P VLA G G K V+L
Sbjct: 680 TDAETWVCDQARLTLEDRCNVRPF--ASNRMRPGE--VPNVLAITIGQGTKKDAVIGVLL 735
Query: 479 DSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
G + + + N+RD ++ + + +P V+ + +++ L+
Sbjct: 736 GDDGNIR-------ASYKFDNLRDADPRRT----FMDVVERQRPDVIAIAGLSVETARLR 784
Query: 539 DDIYEIIFKMVEEH-------PRD-----------------VGHEMDELSIVYGDESLPR 574
+D + ++V E P D +G+ M L I+ DE+ R
Sbjct: 785 NDAQSALREIVIEQSGLQPPQPEDYSSHDDYQMELSRFNDSLGNRMTPL-IMVNDETA-R 842
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
LY NS ++ + P N + A+AL RY QNPL A + G+++ + L L P
Sbjct: 843 LYMNSTDAAQEHPELPVNGRYALALARYTQNPLNAYARV---GKQLTALTFVDLHQKLVP 899
Query: 635 DEKYGM-IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA- 692
+EK + +E+ +V+ GL++N+ + +Q L +I+GLGPRKA L ++ ++G
Sbjct: 900 EEKLLLALERGLVNAVAICGLELNITANSPYQRYMLPYIAGLGPRKANQLANAISQSGGH 959
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVR------RSGQAASSSQFIDLLDDTRIHPESYG 746
+ R + LG VF N GFL + +A ++ + LD TRIHPE Y
Sbjct: 960 VMNRMALPETNTLGPTVFENVAGFLYISADLKDFSQLEAGDTTDQPEPLDMTRIHPEDYE 1019
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKR 803
AQ++ ++ + D E + + A+ + + + DR L+ +D +R+ NKR
Sbjct: 1020 FAQKMCQDALDLDAEDVADQHKSAVVVTLMNDEDRGKKLRDLNIDDFAFNLQRQGEGNKR 1079
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAI 863
L I EL+H D R + P + M++GE+ T+ G V ATVR+ R
Sbjct: 1080 HALGEIVSELVHWHADRRPPFYIPDDWQILTMLTGESSRTINRGLQVTATVRKALSSRVF 1139
Query: 864 CVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN 923
C LESG+ +L +E SD+ + D + I + R++V L R S+M
Sbjct: 1140 CTLESGIEAVLEREYVSDNDDVNSCDDVFKPRQAIKAVIIDVDPVRFEVRLSTRASDMS- 1198
Query: 924 NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHF--KERLIVHPCFQNVTADEAMK 981
Q + P+ +E + ++ +R++ HP + + + +A +
Sbjct: 1199 ---QSVPFIAPFRQDEFNDEGRMAMAEEAAAAKRRRQAGSVKRVVNHPNWHVMNSGQAEQ 1255
Query: 982 LLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI 1041
L+ + G+ ++RPSS+G +L +T KV + VY H D+ E K ++ +G+ L+I
Sbjct: 1256 FLAPLQRGDVVVRPSSKGADHLAVTWKVDEDVYQHIDVQEIDKPNE-----YALGRILRI 1310
Query: 1042 GED-TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGF 1100
++ DLD+++ ++ +V + + KF+ ++ E++ L+ P R YGF
Sbjct: 1311 ANKYSYSDLDDLIINHVKAIVRKFDEVQMHEKFK--NEGELESFLKNYVQAHPGRSTYGF 1368
Query: 1101 GISHEHPGTFILTYI-RSTNPHHE----YIGLYPKGFKFRKRMFEDIDRLVAYFQRHID- 1154
I +HPG L+++ +ST + ++ + P ++ + L F+
Sbjct: 1369 CIDSDHPGYLKLSFLNKSTKDGGQIQTWHVKVLPGAYQLNNAEVPGVTELCNAFKAQYSA 1428
Query: 1155 --DPQ--GDSAPSIRSVAAMVPMRSPANGGST 1182
D Q G P +R A R+P +GG T
Sbjct: 1429 RLDEQGLGGRTPGVRMAA-----RTPMHGGRT 1455
>gi|303312917|ref|XP_003066470.1| SH2 domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240106132|gb|EER24325.1| SH2 domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320031647|gb|EFW13607.1| transcription elongation factor spt6 [Coccidioides posadasii str.
Silveira]
Length = 1425
Score = 315 bits (806), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 308/1181 (26%), Positives = 530/1181 (44%), Gaps = 118/1181 (9%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R +E +I ++ L+ + ++PFI
Sbjct: 298 EQFKEEAIWISN------LMLLKKRLEPDLREPFQRAI-----VKVLEFMVTDDWEVPFI 346
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + K + + N D D R L LW I + D K+ L +++
Sbjct: 347 FQHRKDYLIHAAKVPMSPSAPNPDGQDYVIRAEKLLNMTDLWDIFEYDLKFRALVDKRNI 406
Query: 140 LQSYYKKRYEEESRRIYDETRLALN--QQLFDSISKSLEAAETEREVDDVD--LKFNLHF 195
LQ R YD + N ++F+ + L AA T E+ D+ + F
Sbjct: 407 LQ------------RTYDNLKNVANVKDEVFEQM---LPAAVTMEELQDLQDYIYFEYSS 451
Query: 196 PPGEVGVDEGQ------YKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
+V + G ++R K +TK Y + + + FG + + E
Sbjct: 452 ELKDVAMVNGNGENGAVHQRRKAATKTFYERIRNSKAYGLVRAFGITPDGFAQNAMKEAK 511
Query: 248 GDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
++DP E PE+MA F + L+ A+ M A ++ P VRK +R F N V
Sbjct: 512 RHHIDDPTELPEDMADGLLDTHFANGLHALKAAKTMFAEQLIMSPKVRKELRRAFYMNGV 571
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKLP- 364
+ T G ID H + K+LR + L L ++ KAEEE L+ V ++
Sbjct: 572 IDCFRTEKGLKKIDEHHPYYEFKYLRNQQLSDIARRPELFLRMLKAEEEGLVDVNVRFQN 631
Query: 365 -EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
++ +L+ D + SD S+ A WN R+ +L AL L M + + +
Sbjct: 632 FDNYKRRLYRDIQ----SDNFSEVADAWNKARKEVLDMALAR-LDKIMSRGVKENIKTEC 686
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFVMLDS 480
++ + E +A ++ PY+ K + PRVL G G K + ++
Sbjct: 687 ENHVAKECREAFSLRLDQAPYKPKGMILG----TIPRVLTLSAGAGIIGKDPIYWAWVEE 742
Query: 481 SGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
G V++ G T + D+ S D L+ + +P V+ + ++ L
Sbjct: 743 DGRVLE---NGKFTDLTLGDPDRMISDGRDVNSLIDLVERRKPDVIGISGMSPETRKLYK 799
Query: 540 DIYEII-FKMVEEHP--RDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKR 595
+ E+I K + P D E+ D L +V ++ + RLY S + + PG
Sbjct: 800 QLAELIDAKNLRSSPYTNDNDDEVSDPLEVVIVNDEVARLYHTSDKARSEHPGLHPLTIY 859
Query: 596 AVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLD 655
V+L +YLQNP+ A+L GR+I+S + P + ++ ++ +E +VD+ N G+D
Sbjct: 860 CVSLAKYLQNPMKEYASL---GRDIVSIQFKPGQQLISQEKLLKQLESALVDMVNLCGVD 916
Query: 656 INLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG----LGKKVF 710
IN A++ L ++SGLGPRKA+ L + + + G + R + + + +G KV+
Sbjct: 917 INEAVNDPATANLLTYVSGLGPRKASQLLKIINMNGGVVNNRMELLGVNAQYPAMGVKVW 976
Query: 711 VNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED- 769
N FL + ++ D LD+TR+HPE Y + +++A + D E D+ + D
Sbjct: 977 NNCASFLYIDYD----TADPDTDYLDNTRVHPEDYDIGRKMAADALELD-EEDIKAETDE 1031
Query: 770 ----------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQD 819
E A E V D +L+ Y +++ + KR TL IR EL +++
Sbjct: 1032 NGPGAIVRKLVKEDAQEKVNDL--ILEEYA--EQLEKNLNQRKRATLETIRAELQQPYEE 1087
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
R Q+ S D F M +GET DTLAEG VV T++R+ L+ G+ ++ + +
Sbjct: 1088 LRKQFVFLSTDAIFTMFTGETADTLAEGMVVPVTIKRITDDHIDGKLDCGVDVLIPEMEL 1147
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSI-QKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHE 938
+D + DI + SI Q ++ + R++ + N + Q + PY E
Sbjct: 1148 TDRY------------DIPVRSLYSIHQTVPAKLLYLNRKAFIANASLREDQVIRPYRRE 1195
Query: 939 ------ERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
E +Q Q++ ++E R+I HP F+ +A + L+++ G+++
Sbjct: 1196 FDHMRDEWDDKQEHQDQEAMKEETKTSTRTLRVIKHPLFRPFNGPQAEEFLASQSRGDAV 1255
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDE 1051
IRPSS+GP +L +T KV DGVY H D++E K+++ +GK LKI G+ ++ DLDE
Sbjct: 1256 IRPSSKGPDHLAVTWKVSDGVYQHIDVLELDKENE-----FSVGKILKIGGKYSYSDLDE 1310
Query: 1052 VVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFI 1111
++ ++ + + M + K++ GSK + L PTR Y F I +HPG F
Sbjct: 1311 LIVNHVKAMARKVDDMTIHEKYQSGSKEATERWLTTYTTANPTRSAYAFCIDPKHPGYFH 1370
Query: 1112 LTYIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
L + N + + P+G++ ++ + D+ L F+
Sbjct: 1371 LCFKAGQNASMNSWPVKVIPQGYELQRNPYPDMMALCNGFK 1411
>gi|393224602|gb|EJD32928.1| hypothetical protein AURDEDRAFT_177982, partial [Auricularia delicata
TFB-10046 SS5]
Length = 1024
Score = 313 bits (803), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 276/1074 (25%), Positives = 488/1074 (45%), Gaps = 131/1074 (12%)
Query: 221 KAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMA-SNFKCAMFNSSQAVLQG 279
K + ++A +G S+E + L ++D + P E A + A + L
Sbjct: 1 KTIVAKLAEGYGLSAESVVLNFLASTRQHFVDDQEAPPLEYAEQSIDPAAAADPKDQLAK 60
Query: 280 ARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRK 339
AR + A E+ +P +R+ R+ F AV+S PT G + ID FH + K+L++KP+
Sbjct: 61 ARMILATELGKDPLLRQEARTHFKSFAVLSVIPTEKGIAKIDEFHPYYAFKYLKDKPISM 120
Query: 340 -FEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+Q L I +AE + L+ V I L + + E + SD + + WN +REL+
Sbjct: 121 MLRSSQLLHILRAESDHLVTVDIHLTQAARMDFDRRLLEAFRSDSYRDTVKAWNYERELV 180
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI------- 451
+++ ++ FL+P K + + ++ L +++V + ++ +
Sbjct: 181 IREVVEKFLIPLGAKWVKEWAREEVEDFIAKGCAVELEGRINVVGFNQRMESLPVNAPPQ 240
Query: 452 -TPDEEAAPRVLACCWGPGKPE---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
P+ ++ P +LA WG G P+ T V LD +G LR D
Sbjct: 241 SLPNPDSFPSILAMSWGKGDPQKDAITMVFLDQNGR-----------LREYTAIDNLFDP 289
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP-------------- 553
+ LL+ + +P +V+ ++ L + + E++ K +P
Sbjct: 290 EPRRELLELIKRRKPQGIVVAGFSIHTMKLHEKVKELLEKESGVNPPEGGAGGSGSGWGE 349
Query: 554 RDVGHEMD----ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
RD D + +VY + + RLY++S ++D+ K V L R+ Q+PL
Sbjct: 350 RDRDRSEDAWHARIPVVYVKDEVARLYQHSARATDEFGDLSTMAKYCVGLARFAQSPLIE 409
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGM-IEQVMVDVTNQVGLDINLAIHREWQFAP 668
A L G ++ + L P EK + +E+ +V+V N VG+DIN A++ +
Sbjct: 410 YAAL---GSDLPAITFDADAQTLVPREKLLVALERALVNVVNYVGVDINQAVNDPYYCHI 466
Query: 669 LQFISGLGPRKAASLQRSLVR-AGAIFTRKDFVTAHGLGKKVFVNAVGFLRV-------- 719
L F++GLGPRKA L++ ++ G + R+ F+ + K++FVN GFLR+
Sbjct: 467 LPFVAGLGPRKAQHLKKKILAIGGTMMNREQFIKV--MTKQIFVNTAGFLRIPQKDDYDD 524
Query: 720 ---RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMA-I 775
+ + S D LD TRIH E Y LA+++A + + D E D+ DD ++ + I
Sbjct: 525 ARDSKRSKHDDVSNVPDPLDQTRIHLEDYELARKMATDALDMD-EEDVKDDHPSMVITQI 583
Query: 776 EHVRDRPDLLKTYLLDRHIKEKKREN---KRETLYLIRRELIHGFQDWRNQYKEPSQDEE 832
+ RD+ L LD + N KR+TL I+ EL+H F D R +++ PS +
Sbjct: 584 LNHRDKEKKLNELNLDDFAVNLQMTNQGFKRQTLDNIKSELLHPFADGRREFRLPSHWDV 643
Query: 833 FYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKL 892
M++GET+ +L G +V V R + A L SG+ G++ ++ + +D +
Sbjct: 644 VTMLTGETQKSLRVGLIVSVVVTRFKHGLAHVRLASGVDGIINQQYLA------ATADAV 697
Query: 893 HEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP---YYHEERSSRQSEQEK 949
G + I ++ +R + + + + P +Y R++R E +
Sbjct: 698 SRGMTIPAVIIHLKDDRNIAVELSSLPDHVARGDSDFRRVAPEAEFYDHARAARDKETLQ 757
Query: 950 ARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKV 1009
RK E + R+I HP F N +A + L+ +E G++++RPSS+G ++L +T KV
Sbjct: 758 RRKRHETGQA---RRVIKHPNFHNFNMLQAEQYLANRERGDAVVRPSSKGQNHLAVTWKV 814
Query: 1010 YDGVYAHKDIIE---GGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKA 1066
G+Y H D++E GG D+ G+ L + ++DE++ ++ + ++
Sbjct: 815 DTGLYQHIDVVEEQTGGTG--DV-----TGRLLIDNNYQYSEIDELIVNHVKAMARRVEE 867
Query: 1067 MLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIG 1126
++++ KF+ G++ +++ LR +PT+ VY F ++ + PG F ++++ + + G
Sbjct: 868 LMAHEKFKAGTQEDLEHHLREVVKAYPTQSVYAFSLNRQRPGHFNISFLANKDSQITTWG 927
Query: 1127 LYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMR------SPANGG 1180
+ R++ F + D +APS+ + MR A+GG
Sbjct: 928 V----------------RVLPQFYQLFD----ATAPSVAQLTDAFKMRHLHETSKAAHGG 967
Query: 1181 STA-SAGSGWGGSTNEGGWNRDRSSTPGSRT-GRNDYRNGGGRDGHPSGLPRPY 1232
T SAG G T GG TPGS T GR R G P PY
Sbjct: 968 KTPYSAGFGM---TPAGG------RTPGSATPGRMSARRVG-------RTPNPY 1005
>gi|119192326|ref|XP_001246769.1| hypothetical protein CIMG_00540 [Coccidioides immitis RS]
gi|392863991|gb|EAS35219.2| transcription elongation factor spt6 [Coccidioides immitis RS]
Length = 1425
Score = 313 bits (802), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 304/1179 (25%), Positives = 529/1179 (44%), Gaps = 114/1179 (9%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R +E +I ++ L+ + ++PFI
Sbjct: 298 EQFKEEAIWISN------LMLLKKRLEPDLREPFQRAI-----VKVLEFMVTDDWEVPFI 346
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + K + + N D D R L LW I + D K+ L +++
Sbjct: 347 FQHRKDYLIHAAKVPMSPSAPNPDGQDYVIRAEKLLNMTDLWDIFEYDLKFRALVDKRNI 406
Query: 140 LQSYYKKRYEEESRRIYDETRLALN--QQLFDSISKSLEAAETEREVDDVDLKFNLHFPP 197
LQ R YD + N ++F+ + ++ E +++ D + F
Sbjct: 407 LQ------------RTYDNLKNVANVKDEVFEQMLPAVVTMEELQDLQDY-IYFEYSSEL 453
Query: 198 GEVGVDEGQ------YKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGD 249
+V + G ++R K +TK Y + + + FG + + E
Sbjct: 454 KDVAMVNGNGENGAVHQRRKAATKTFYERIRNSKAYGLVRAFGITPDGFAQNAMKEAKRH 513
Query: 250 ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
++DP E PE+MA F + L+ A+ M A ++ P VRK +R F N V+
Sbjct: 514 HIDDPTELPEDMADGLLDTHFANGLHALKAAKTMFAEQLIMSPKVRKELRRAFYMNGVID 573
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKLP--E 365
T G ID H + K+LR + L L ++ KAEEE L+ V ++ +
Sbjct: 574 CFRTEKGLKKIDEHHPYYEFKYLRNQQLSDIARRPELFLRMLKAEEEGLVDVNVRFQNFD 633
Query: 366 DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKS 425
+ +L+ D + SD S+ A WN R+ +L AL L M + + + ++
Sbjct: 634 NYKKRLYRDIQ----SDNFSEVADAWNKARKEVLDMALAR-LDKIMSRGVKENIKTECEN 688
Query: 426 WLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFVMLDSSG 482
+ E +A ++ PY+ K + PRVL G G K + ++ G
Sbjct: 689 HVAKECREAFSLRLDQAPYKPKGMILG----TIPRVLTLSAGAGIIGKDPIYWAWVEEDG 744
Query: 483 EVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
V++ G T + D+ S D L+ + +P V+ + ++ L +
Sbjct: 745 RVLE---NGKFTDLTLGDPDRMISDGRDVNSLIDLVERRKPDVIGISGMSPETRKLYKQL 801
Query: 542 YEII-FKMVEEHP--RDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAV 597
E+I K + P D E+ D L +V ++ + RLY S + + PG V
Sbjct: 802 AELIDAKNLRSSPYTNDNDDEVSDPLEVVIVNDEVARLYHTSDKARSEHPGLHPLTIYCV 861
Query: 598 ALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDIN 657
+L +YLQNP+ A+L GR+I+S + P + ++ ++ +E +VD+ N G+DIN
Sbjct: 862 SLAKYLQNPMKEYASL---GRDIVSIQFKPGQQLISQEKLLKQLESALVDMVNLCGVDIN 918
Query: 658 LAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG----LGKKVFVN 712
A++ L ++SGLGPRKA+ L + + + G + R + + + +G KV+ N
Sbjct: 919 EAVNDPATANLLTYVSGLGPRKASQLLKIINMNGGVVNNRMELLGVNAQYPAMGVKVWNN 978
Query: 713 AVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED--- 769
FL + ++ D LD+TR+HPE Y + +++A + D E D+ + D
Sbjct: 979 CASFLYIDYD----TADPDTDYLDNTRVHPEDYDIGRKMAADALELD-EEDIKAETDENG 1033
Query: 770 --------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWR 821
E A E V D +L+ Y +++ + KR TL IR EL +++ R
Sbjct: 1034 PGAIVRKLVKEDAQEKVNDL--ILEEYA--EQLEKNLNQRKRATLETIRAELQQPYEELR 1089
Query: 822 NQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSD 881
Q+ S D F M +GET DTLAEG VV T++R+ L+ G+ ++ + + +D
Sbjct: 1090 KQFVFLSTDAIFTMFTGETADTLAEGMVVPVTIKRITDDHIDGKLDCGVDVLIPEMELTD 1149
Query: 882 DWRDSELSDKLHEGDILTCKIKSI-QKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHE-- 938
+ DI + SI Q ++ + R++ + N + Q + PY E
Sbjct: 1150 RY------------DIPVRSLYSIHQTVPAKLLYLNRKAFIANASLREDQVIRPYRREFD 1197
Query: 939 ----ERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
E +Q Q++ ++E R+I HP F+ +A + L+++ G+++IR
Sbjct: 1198 HMRDEWDDKQEHQDQEAMKEETKTSTRTLRVIKHPLFRPFNGPQAEEFLASQSRGDAVIR 1257
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVV 1053
PSS+GP +L +T KV DGVY H D++E K+++ +GK LKI G+ ++ DLDE++
Sbjct: 1258 PSSKGPDHLAVTWKVSDGVYQHIDVLELDKENE-----FSVGKILKIGGKYSYSDLDELI 1312
Query: 1054 DRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILT 1113
++ + + M + K++ GSK + L PTR Y F I +HPG F L
Sbjct: 1313 VNHVKAMARKVDDMTIHEKYQSGSKEATERWLTTYTTANPTRSAYAFCIDPKHPGYFHLC 1372
Query: 1114 YIRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ N + + P+G++ ++ + D+ L F+
Sbjct: 1373 FKAGQNASMNSWPVKVIPQGYELQRNPYPDMMALCNGFK 1411
>gi|406698083|gb|EKD01329.1| hypothetical protein A1Q2_04407 [Trichosporon asahii var. asahii CBS
8904]
Length = 1522
Score = 313 bits (801), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 288/1172 (24%), Positives = 532/1172 (45%), Gaps = 111/1172 (9%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+++ +Q L++P++ Y K + +L+ Q+ V + D+ LW +++L
Sbjct: 339 LNMMFVQHLEVPYLWHY-KRDSFGVLEAQGQSSVQFLDGDE------------LWELYNL 385
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS-KSLEAAETEREVD 185
+K+ + +R +L+ ++K +E + DE L + L ++ +++E A +
Sbjct: 386 GQKYRAIWERVQSLKEQWRK-IKERKPDLEDEY---LEKTLLSTVCLRNIETAAEGADWL 441
Query: 186 DVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE 245
L E +EG + P+R + + ++A FG S + L + E
Sbjct: 442 AYTYASELRAIKEEAAAEEGTKRLPERQSG-GKIRDGPVLKLAEAFGISVPTVALVFN-E 499
Query: 246 KMGD--ELEDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI 301
GD L +P++ P +A F + F + + L+ A+ + + + +P +R+ R
Sbjct: 500 TDGDPASLSNPEKMPLALAEEFSGEGTPFYTPEDALKAAKEILINDFAHDPTIRQQARDF 559
Query: 302 FMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED-AQWLLIQKAEEEKLLQVT 360
V+ PT G ++ID++H + K+L +KP+ F+D AQ+L + KAEEE L+ ++
Sbjct: 560 VEALGTVTVTPTERGMASIDAYHAYYPFKFLTDKPIPNFKDSAQFLHLLKAEEEGLITIS 619
Query: 361 IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMS 420
I PE+S + S S S+ A WN +R ++ A LP+ + + +
Sbjct: 620 ISAPEESTKEFISALSRCAQSKDYSELAVSWNAERGQVIDTAFRKHYLPAACRWIKEQLR 679
Query: 421 GRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG--KPETTFVML 478
A++W+ + L ++ +V P+ N + P E P VLA G G K V+L
Sbjct: 680 TDAETWVCDQARLTLEDRCNVRPF--ASNRMRPGE--VPNVLAITIGQGTKKDAVIGVLL 735
Query: 479 DSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
G + + + N+RD ++ + + +P V+ + +++ L+
Sbjct: 736 GDDGNIR-------ASYKFDNLRDADPRRT----FMDVVERQRPDVIAIAGLSVETARLR 784
Query: 539 DDIYEIIFKMVEEH-------PRD-----------------VGHEMDELSIVYGDESLPR 574
+D + ++ E P D +G+ M L I+ DE+ R
Sbjct: 785 NDAQSALREIAIEQSGLQPPQPEDYSSHDDYQMELSRFNDSLGNRMTPL-IMVNDETA-R 842
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
LY NS ++ + P N + A+AL RY QNPL A + G+++ + L L P
Sbjct: 843 LYMNSTDAAQEHPELPVNGRYALALARYTQNPLNAYARV---GKQLTALTFVDLHQKLVP 899
Query: 635 DEKYGM-IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA- 692
+EK + +E+ +V+ GL++N+ + +Q L +I+GLGPRKA L ++ ++G
Sbjct: 900 EEKLLLALERGLVNAVAICGLELNITANSPYQRYMLPYIAGLGPRKANQLANAISQSGGH 959
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVR------RSGQAASSSQFIDLLDDTRIHPESYG 746
+ R + LG VF N GFL + +A ++ + LD TRIHPE Y
Sbjct: 960 VMNRMALPETNTLGPTVFENVAGFLYISADLKDFSQLEAGDTTDQPEPLDMTRIHPEDYE 1019
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKR 803
AQ++ ++ + D E + + A+ + + + DR L+ +D +R+ NKR
Sbjct: 1020 FAQKMCQDALDLDAEDVADQHKSAVVVTLMNDEDRGKKLRDLNIDDFAFNLQRQGEGNKR 1079
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAI 863
L I EL+H D R + P + M++GE+ T+ G V ATVR+ R
Sbjct: 1080 HALGEIVSELVHWHADRRPPFYIPDDWQILTMLTGESSRTINRGLQVTATVRKALSSRVF 1139
Query: 864 CVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN 923
C LESG+ +L +E SD+ + D + I + R++V L R S+M
Sbjct: 1140 CTLESGIEAVLEREYVSDNDDVNSCDDVFKPRQAIKAVIIDVDPVRFEVRLSTRASDMS- 1198
Query: 924 NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHF--KERLIVHPCFQNVTADEAMK 981
Q + P+ +E + ++ +R++ HP + + + +A +
Sbjct: 1199 ---QSVPFIAPFRQDEFNDEGRMAMAEEAAAAKRRRQAGSVKRVVNHPNWHVMNSGQAEQ 1255
Query: 982 LLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI 1041
L+ + G+ ++RPSS+G +L +T KV + VY H D+ E K ++ +G+ L+I
Sbjct: 1256 FLAPLQRGDVVVRPSSKGADHLAVTWKVDEDVYQHIDVQEIDKPNE-----YALGRILRI 1310
Query: 1042 GED-TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGF 1100
++ DLD+++ ++ +V + + KF+ ++ E++ L+ P R YGF
Sbjct: 1311 ANKYSYSDLDDLIINHVKAIVRKFDEVQMHEKFK--NEGELESFLKNYVQAHPGRSTYGF 1368
Query: 1101 GISHEHPGTFILTYI-RSTNPHHE----YIGLYPKGFKFRKRMFEDIDRLVAYFQRHID- 1154
I +HPG L+++ +ST + ++ + P ++ + L F+
Sbjct: 1369 CIDSDHPGYLKLSFLNKSTKDGGQIQTWHVKVLPGAYQLNNAEVPGVTELCNAFKAQYSA 1428
Query: 1155 --DPQ--GDSAPSIRSVAAMVPMRSPANGGST 1182
D Q G P +R A R+P +GG T
Sbjct: 1429 RLDEQGLGGRTPGVRMAA-----RTPMHGGRT 1455
>gi|345567751|gb|EGX50679.1| hypothetical protein AOL_s00075g105 [Arthrobotrys oligospora ATCC
24927]
Length = 1409
Score = 312 bits (800), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 309/1184 (26%), Positives = 535/1184 (45%), Gaps = 126/1184 (10%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RK A E +E WI + + F Q+ P H R + R LD
Sbjct: 278 RKPYAHIAITDEEYAEEGNWIASLM-------FAQKRNLQPH--HRQPFFRA-VNRVLDF 327
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKK 129
+ ++IPFI RK+ ++N+ +R L LW + +LD K
Sbjct: 328 IVKDNMEIPFIYQNRKDYI-----------IHNEGRSGGDR---LLGQDELWTVMELDLK 373
Query: 130 WLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDL 189
+ +K+A++ Y +S I DET S + E E+ D L
Sbjct: 374 YRAFIDKKNAVKRTY------QSLNIQDET-----------YSDRINDLENVEEIQD--L 414
Query: 190 KFNLHFPPGEV------------GVDEGQYKRPKRS-TKYSSCSKAGLWEVASKFGYSSE 236
+ L F E G + KRP + T + K+ ++ + FG S+
Sbjct: 415 QEYLQFRYSEELKDLAAIQSQANGANGAHKKRPGATRTIFDKIRKSRVYNLVKAFGISAA 474
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASN-FKCAMFNSSQAVLQGARHMAAVEISCEPCVR 295
+ +SL++ + ++P E P E+A F +S L+ A+ M A E P +R
Sbjct: 475 EFAHNVSLDQKRNFPDEPAEFPNELADTCLDGRDFKTSSEALKAAKAMLAEEFFMNPILR 534
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEE 353
+ VR N + T G ID H + K+L+ + A++L + AE
Sbjct: 535 RAVRQKLFINGQLHVKTTDKGLKKIDELHPYYEFKYLKNQSTGALLSHPARFLKMLAAES 594
Query: 354 EKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVK 413
E L VT+++ + + + S+ S A WN++R+ ++ A++ LL M K
Sbjct: 595 EGL--VTLQIEMSTKTRFLRQLYDLISSENYSDQADTWNEERKDVVDMAMEK-LLNLMAK 651
Query: 414 EARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK--DNDITPDEEAAPRVLACCWGPGKP 471
+ + + L + K ++ G +Q D +I P PRVLA G G
Sbjct: 652 NYKENIKTVCEDELAKQVRKNYTERLDQGHFQVNPADPNILP-----PRVLALTAGQGTD 706
Query: 472 --ETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG 528
+ F V +D G+V++ TL+ VRD + K + +K + D P V+ LG
Sbjct: 707 LRDGVFGVFMDQYGKVLE-------TLKMNGVRDTEEVK----KFVKLINDRNPAVIALG 755
Query: 529 AVNLSCTSLKDDIYEIIFKMVEEHPR--DVGH-EMDELSIVYGDESLPRLYENSRISSDQ 585
++ +L+ + +II EE R D H + + L +++ + + RLY NS ++
Sbjct: 756 GFTVATYTLESALRKII---EEEDIRLDDEDHGQRNLLDVIFVQDEVARLYMNSERAAVD 812
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
P Q + AL RY+QNPL A CG +++LS P + L ++ +E M
Sbjct: 813 FPSQSSLGRYCAALARYVQNPLLEYAA-CG--QDVLSISFHPDQQLLPREKLESNLESAM 869
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG 704
VD+ N G++IN ++ ++ L ++ GLGPRKA + + + G++ +R V
Sbjct: 870 VDMVNLTGVNINEVVNNQYYANLLPYLCGLGPRKAGHMLKMIGQNGGSVQSRSQMVGDPD 929
Query: 705 LGKK------VFVNAVGFLRVRRSGQ-AASSSQFIDLLDDTRIHPESYGLAQELAKEVYN 757
L K V+ N F + + + A+ S++ LD TR+HP+ Y L +++A +
Sbjct: 930 LNIKPLMGPCVWTNCASFTIIEYAYELKAADSEY---LDSTRVHPQDYELGRKMAADALE 986
Query: 758 RDIEGDLND-----DEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLI 809
D E D+N+ D+ + + +D + +L+ + E +R + KR TL I
Sbjct: 987 LD-EEDVNERTNNGDDPGAVIRLMISKDEQYKVNELILEEYADELERNFNQRKRATLETI 1045
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
R EL +++ RN ++ S +E F ++GET D+L G +V +RRV + + L+ G
Sbjct: 1046 RAELQEPYEELRNPFRRLSSEEIFTKLTGETVDSLVPGMIVPVNIRRVTDRFLVTKLDCG 1105
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
+ G + E+ SD + S S H + KIK+I + L +ESE+R +
Sbjct: 1106 ITGNVASEEMSDKFGVSPHS-LFHVSQTVQAKIKTINIRSFYAELTLKESELRIPFRKSY 1164
Query: 930 QNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPG 989
+ + E++ R R+E++ H R+I HP F+ + +A + L+ G
Sbjct: 1165 EREQDEWDEDQEERDRVALTVRQEEQ----HRAARVIKHPLFRAFNSRQAEEYLAQHSRG 1220
Query: 990 ESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFED 1048
+ +IRPSS+G ++ +T KV DG+Y H D++E K+++ IG+TLK+ G+ T+ D
Sbjct: 1221 DVVIRPSSKGQDHIAITWKVGDGMYQHIDVLELDKENE-----FSIGRTLKVGGKYTYSD 1275
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG 1108
LD+++ +I P+ + + + KF+K ++ E + L FP R VY F + PG
Sbjct: 1276 LDDLIFNHIKPMAKKVGEIERHDKFKK-TREEAEAWLTNYAEAFPGRTVYVFHPDPKRPG 1334
Query: 1109 TFILTYIRSTN--PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
F L + N P+ + + P+ F ++ D++ L F+
Sbjct: 1335 HFDLCFKTGQNKPPNSWKVTVVPQAFSLANNLYGDVNALCNGFK 1378
>gi|358391894|gb|EHK41298.1| hypothetical protein TRIATDRAFT_29617 [Trichoderma atroviride IMI
206040]
Length = 1410
Score = 310 bits (795), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 294/1181 (24%), Positives = 532/1181 (45%), Gaps = 109/1181 (9%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---DDIMRF 66
RK+ E +E+ WI NQL PK+G + + +
Sbjct: 286 RKSFKNLQLTAEQFKEEARWITNQLW--------------PKKGLVQELQAPFGKAVSKV 331
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+ + ++++PF+ +RK+ L K + + D D ++ L LW I +L
Sbjct: 332 LEFFIVDEVEVPFVFQHRKDYLLHSKKIRKSTRDDPDGPDYTIQSDKLLNQDDLWRILEL 391
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS-ISKSLEAAETEREVD 185
D K+ +++++L+ + E +++ Q DS + + + A T E+
Sbjct: 392 DIKFRSFVEKRNSLEKSF-------------ENLKSMDVQ--DSMVEEMIPEATTMEEIQ 436
Query: 186 DVD--LKFNLHFPPGEVGVDEGQY---KRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLG 239
D+ L+F ++ G KRP +S+ + +G +++QL
Sbjct: 437 DLQDYLQFQYANKLKDLATLAGNISLTKRPGSKSSLLDRVRNGKAYYFVKAYGITADQLA 496
Query: 240 LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR 299
+ +D ++ P ++A FN+ V+ AR M A E+ P +RKY+R
Sbjct: 497 KNALRQGRKVAPDDNEQYPMDLADTLLDDSFNTGDQVMNAARQMYAEELFASPRMRKYLR 556
Query: 300 SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLL 357
+ F A +S T G ID H + VK+++ + + + +L + +AEEE L+
Sbjct: 557 ASFYQAAELSCRRTDKGLRKIDDTHPYYEVKYIQNQAIADLVHQPEVFLKMMRAEEEGLV 616
Query: 358 QVTIKLPE--DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
++ +++P D +L+ + + S+ S A+ W ++R+ +L A L + K
Sbjct: 617 EIKLEMPSRYDFRRQLY----QEFESENFSDRAEQWREERKKVLDLAYPK-LEKIVAKNI 671
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE--- 472
+ ++ + +L + + K+ PY+ K + PRVL G G P
Sbjct: 672 KEVIRTFCQDEVLKMCRQEFYRKLDQAPYKPKGMILG----TTPRVLVLSNGGGDPTRDP 727
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
+ ++ G V++ G L RD+ ++N ++ + +P V+ +G +
Sbjct: 728 VCWAWVEEEGRVLEQGKFGNLG------RDETQREN----FVELVRRRRPDVIGVGGWSS 777
Query: 533 SCTSLKDDIYEII-----FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
L D+ ++ E P + + L ++ ++ + RLY++S + + P
Sbjct: 778 DTQKLVRDLEGLVSEKSLMGAEFEDPETNDYRTELLEVIVVEDEVARLYKDSPRAIAEHP 837
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ +AL RYLQNP+ A L +++ S P +N L PD+ +E MVD
Sbjct: 838 SLNPITRYCIALARYLQNPMKEYAAL---NKDVASLSFHPCQNLLPPDKLMKYLESAMVD 894
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLG 706
N VG++IN A+ + L +++GLGPRKA S+ +++ G + TR + V G
Sbjct: 895 TVNMVGVNINEAMTDSYTANLLPYVAGLGPRKATSVIKTINANGGVVNTRDELVGDPDSG 954
Query: 707 K------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYN 757
K +V+ N FL + SS D LD+TR+HPE Y L +++A E+
Sbjct: 955 KLPVVGPRVWNNCASFLYIEYDATNPSS----DPLDNTRVHPEDYELGRKMAADALELDE 1010
Query: 758 RDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIRRELI 814
D++ + +++ + +D + + +LD + + +R + KR TL I EL
Sbjct: 1011 EDVKAETDENGPGAIVRKLFKQDEQERVNELVLDEYADQLQRNFSQRKRATLEAISAELQ 1070
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+++ R + + + F M +GET+ TL EG +V VR V+ AI L+ G+ G +
Sbjct: 1071 APYEELRRSFALLTPSDIFTMFTGETKSTLCEGMIVPVMVRMVRDDFAIVKLDCGIEGRI 1130
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
+ S+ S + D L G + KI + + L RE +R Y+ N
Sbjct: 1131 EGHEVSNR---SSVKDVLSSGQTVQAKILEMNYKDFLAKLSMREESLRIP-YKPPINFGR 1186
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ ++E K+K + +R++ HP F+ + +A + L ++ PGE IIR
Sbjct: 1187 DGWDYALEAADKEELREKDKTTGRT---QRVVKHPNFKPYNSIQAEEFLGSQPPGEVIIR 1243
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVV 1053
PSS+G +L +T KV DGVY H D++E KD + +GK L+I G+ T+ DLDE++
Sbjct: 1244 PSSKGNDHLAITWKVADGVYQHIDVLEMQKDTE-----FSVGKLLRIGGKYTYSDLDELI 1298
Query: 1054 DRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILT 1113
++ + ++ M+ + K++ S+ E ++ L P R Y F I +HPG F L
Sbjct: 1299 VDHVKAMAKKVEEMMRHDKYQNRSRNETEKWLITYVDANPNRSAYAFCIDTKHPGYFWLC 1358
Query: 1114 YIRSTNPHHEYIGL----YPKGFKFRKRMFEDIDRLVAYFQ 1150
+ S IGL P+GF+ R + D+ L F+
Sbjct: 1359 FKASKTAR--VIGLPVRTIPQGFELRGYQYPDMRALCNGFK 1397
>gi|302421646|ref|XP_003008653.1| transcription elongation factor SPT6 [Verticillium albo-atrum
VaMs.102]
gi|261351799|gb|EEY14227.1| transcription elongation factor SPT6 [Verticillium albo-atrum
VaMs.102]
Length = 1412
Score = 310 bits (793), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 300/1192 (25%), Positives = 540/1192 (45%), Gaps = 128/1192 (10%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RK E +E+ WI N L + +G L I + L+
Sbjct: 282 RKPFKHLQLTAEQFKEEARWIANLLWPKKM-----------LQGDLLGPFTKAIGKVLEF 330
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT---LKWHKVLWAIHDL 126
+ +++P++ +RK+ + K +N + D+ D E T L LW I +L
Sbjct: 331 FVVDGVEVPYVFQHRKDYLIHTKK--TRNPAHRDDPDAPEFIITADKLLTQDDLWRILEL 388
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF-DSISKSLEAAETEREVD 185
D K+ L ++++AL+ +T + +N + D I+++ E + D
Sbjct: 389 DIKFRSLMEKRNALEKTLDNL----------KTEMGVNDDILEDMITQAANMEELQDLQD 438
Query: 186 DVDLKFNLHFPP-GEVGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS 243
++ ++ + Q KRP + + ++ +++ +G + ++L
Sbjct: 439 YLNFQYAAQLKDLASMNGSAKQTKRPGSKGALFDKVRRSRVYDFVRAYGITPDRLARNAL 498
Query: 244 LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM 303
E +D E P+ +A + F + +VLQ AR M A E+ P +RK+ R+ F
Sbjct: 499 REGPKVWADDDNELPDNLADQYIDEDFPTGDSVLQAARQMYAEELFVSPRMRKHFRANFY 558
Query: 304 DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTI 361
+ +S T G ID H F +K+L + L ++ KAEE+ L++V +
Sbjct: 559 EMGDISCRRTEKGLRKIDESHPFYEIKYLTHQSFGDMARQPHLFLKMMKAEEDGLIEVKV 618
Query: 362 KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL--LPSMVKEA-RSL 418
+ D K + ++ ++SD S+ A WND+R +L+ A+ L + VKE+ R+
Sbjct: 619 SMENDEGFK--RNLRQEFVSDNYSERADRWNDERTKVLELAVPRLLKHVAKGVKESVRTA 676
Query: 419 MSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PGKPETTF 475
+ EY K K+ PY+ K + PRVL G PG+ T +
Sbjct: 677 CQDEVLTTCREEYSK----KIDQSPYKPKGMVLG----TTPRVLTFSNGMADPGRDATCW 728
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKND--QERLLKFMMDHQPHVVVLGAVNLS 533
+D G D LT +ND +E ++ + +P V+ + +
Sbjct: 729 AWMDEEGRFGDHGRFDNLT------------RNDAAREEFVELVKLRRPDVIGVSGWSAD 776
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDE-----LSIVYGDESLPRLYENSRISSDQLPG 588
L ++ II P E DE L ++ ++ + RLY++S + P
Sbjct: 777 THKLVRELENIISDKGLMGPEFDDPETDEYRAELLEVIVVNDEVARLYKDSPRAVADHPL 836
Query: 589 QKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDV 648
+ + L RY+QNPL A L G++I S P + L D+ +E MVD+
Sbjct: 837 LAPLTRYCIGLARYMQNPLKEYAAL---GKDITSLAFHPCQQLLPQDKLLKNLEFAMVDM 893
Query: 649 TNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV------T 701
N G+DIN A+ + L +++GLGPRKA S+ +++ G + +R + V
Sbjct: 894 VNLCGVDINEAVGDSYTANLLPYVAGLGPRKATSVLKAISANGGYVASRAELVGDIDSGK 953
Query: 702 AHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNR 758
+G +V+ N FL + +S D LD+TR+HPE Y L +++A E+
Sbjct: 954 IPVVGPRVWNNCASFLFIHFESTNPTS----DPLDNTRVHPEDYELGRKMAADALELDEE 1009
Query: 759 DIEGDLNDD-----------EDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLY 807
D++G+ + + +DA E E + L+ Y + +++K + KR TL
Sbjct: 1010 DVKGETDQNGPGAIVRKLFKDDAQEKVNELI------LEEYA--QQLEDKYSQKKRATLE 1061
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
IR EL +++ R + + E F M++GE++++LA G ++ VR V+ + AI L+
Sbjct: 1062 TIRAELQAPYEELRRNFVTLADSEIFTMLTGESKESLAVGMIIPVNVRVVKDEFAIVKLD 1121
Query: 868 SGLAGMLMKEDYSDDWRDSELSDK--LHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
G+ G + ++ R++ + K + G + K+ S++ + L E +++N
Sbjct: 1122 CGIEGRVEPNEHD---RNTGMGIKGVISVGQTVQAKLVSVEYKNFLAKLSIDERDIKNGY 1178
Query: 926 YQHCQNLDPYYH-----EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
+H YH +ER ++E K+K + +R+I H F+ EA
Sbjct: 1179 RKHM------YHPHGTWDERLEADDKEELREKDKSTGR---TQRVINHMLFKPFNGMEAE 1229
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
+ L + GE +IRPSS+G +L +T KV DGV+ H D++E K + +G+ L+
Sbjct: 1230 QWLGTQPNGEKVIRPSSKGNDHLAITWKVADGVFQHVDVLELQKPND-----FSLGQLLR 1284
Query: 1041 IGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGF 1100
+G+ T++DLDE++ YI+ +V + M+ + KF K S+A+V++ L PTR Y F
Sbjct: 1285 VGKMTYKDLDELIHGYIEGMVKKVDEMMQHDKFDKRSRADVEKWLTTYIDANPTRSAYAF 1344
Query: 1101 GISHEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
I+ +HPG F L + +S+ + + ++ +G++ K + D+ L F+
Sbjct: 1345 CINPKHPGYFWLCFKANKSSRVNAMPVKVHHEGYELLKNQYPDMRGLCNGFK 1396
>gi|367023667|ref|XP_003661118.1| hypothetical protein MYCTH_2300154 [Myceliophthora thermophila ATCC
42464]
gi|347008386|gb|AEO55873.1| hypothetical protein MYCTH_2300154 [Myceliophthora thermophila ATCC
42464]
Length = 1416
Score = 309 bits (792), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 287/1127 (25%), Positives = 502/1127 (44%), Gaps = 94/1127 (8%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERT---PTLKWHKV 119
I + L+ + +++P++ +R++ + K +N DN D E T L
Sbjct: 326 IGKVLEFFIIDGVEVPYVFQHRRDYLIHAKKI--RNPDARDNPDAPEYTVDAEKLLTQDD 383
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I +LD K+ L ++++AL+ R + + + + + + + A
Sbjct: 384 LWRILELDIKFRSLVEKRNALE-----------RSVESLKEVGVQDNMLEEM---IRQAA 429
Query: 180 TEREVDDVDLKFNLHFPPGEVGVD------EGQYKRP-KRSTKYSSCSKAGLWEVASKFG 232
T E+ D+ N + + + KRP ++ + ++ ++ G
Sbjct: 430 TLEELQDLQDYLNFQYSAQLKDIAAMGNGVSKEVKRPGAKTALFERIRRSQAYKFVLALG 489
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
+ ++L E + ED P E+A F + V+ AR M A E+ P
Sbjct: 490 ITPDRLAQNALREGKKESSEDDPRPPTELADQLVDDDFPTGDQVINAARQMYAEELFVSP 549
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQK 350
+RK+ R + +VS T G ID H + +K+L +R +L + K
Sbjct: 550 RMRKHFRIQYYSMGIVSCRRTEKGLRKIDEAHPYYEIKYLINHTIRDLAVRPEIFLKMMK 609
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPS 410
AE+E L++V + L ++ + + SD S A WN +R+ +L A L
Sbjct: 610 AEDEGLVEVHLTL--ENEREFRRQLYNEFASDNFSDLADAWNSERQKVLDIAFSK-LEKV 666
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK 470
+ K + + + LL + + ++ P + K + PRVL G G
Sbjct: 667 IAKGVKDSLRTACQDELLKTCREEYFKRLDQAPLKPKGMVLG----TTPRVLTMSNGMGD 722
Query: 471 PE---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
P ++ ++ G V++ L RD+ + E + + P V+ +
Sbjct: 723 PNRDPISWTWVEEDGRVLEHGKFANLA------RDESQR----ELFAELVRRRNPDVIGI 772
Query: 528 GAVNLSCTSLKDDIYEIIFK---MVEEH--PRDVGHEMDELSIVYGDESLPRLYENSRIS 582
+ L D+ II + M E+ P + D L +V ++ + RLY++S +
Sbjct: 773 SGFSADSHRLVKDVEGIISEKGLMGPEYDDPETNEYRSDLLEVVIVNDEVARLYKDSPRA 832
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE 642
+ + P + +AL RY+QNP+ A L G+++ S + P + +L D+ Y +E
Sbjct: 833 ATEHPTLSPLTRYCIALARYMQNPMKEYAAL---GKDVTSLLIHPYQQYLPQDKLYKHLE 889
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTA 702
MVD+ N G+DIN A+ + L +++GLGPRKA L + + G + T +D +
Sbjct: 890 TAMVDIVNLCGVDINEAMGDPYTANLLPYVAGLGPRKAQLLIKGINANGGVVTSRDELVG 949
Query: 703 HG-------LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LG +V+ N FL + S D LD+TRIHPE Y LA+++A +
Sbjct: 950 DPERHKIPVLGPRVWNNCASFLYIEHDSTNPDS----DPLDNTRIHPEDYDLARKVAADA 1005
Query: 756 YNRDIEG-DLNDDEDALEMAIEHV--RDRPDLLKTYLLDRHIKEKKRE---NKRETLYLI 809
D E DE+ + + + + + +L+ + ++ +RE KR TL I
Sbjct: 1006 LGLDEEDVKAETDENGPGAIVRKLFKEEEQEKVNELILEEYAEQLEREYQQRKRATLEAI 1065
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
R EL+ F++ R + S D+ F M +GET D+L EG +V VR V+ AI L+ G
Sbjct: 1066 RAELMGPFEELRKNFAILSTDQIFTMFTGETRDSLCEGMIVPVNVRVVKDDFAIVKLDCG 1125
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
+ G + + S +R S + D L G KI I + + L RE E+R +H
Sbjct: 1126 IEGRVEAHEVS--YRHS-IKDMLQVGQTAQAKIIDINRKDFVCKLSMREEELRRPYRRH- 1181
Query: 930 QNLDPYYHEERSSRQSEQEKARKEKELAKKHFK---ERLIVHPCFQNVTADEAMKLLSAK 986
Y R +QE+ +E+ K +R+I HP F+ + +A + L
Sbjct: 1182 ------YDYGRGQWDYKQEEEDREELREKDKVTGRTQRVIKHPLFKPFNSTQAEEYLGGL 1235
Query: 987 EPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED-T 1045
PGE +IRPSS+G +L +T KV DGVY H D++E K+++ +GK L++G T
Sbjct: 1236 PPGEVVIRPSSKGNDHLAITWKVADGVYQHIDVLELQKENE-----FSVGKVLRVGSKYT 1290
Query: 1046 FEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHE 1105
+ DLDE++ ++ + + ++ + KF+KGS+A++++ L P R Y F + +
Sbjct: 1291 YTDLDELIVDHVKAMAKKVDELMQHEKFQKGSRADLEKWLTTYIDANPNRSTYAFCLDTK 1350
Query: 1106 HPGTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
HPG F L + S N + + P ++ K + D+ L F+
Sbjct: 1351 HPGYFFLCFKASRNSKVVAWMVRVVPHAYELMKSQYPDMRALCNGFK 1397
>gi|402085529|gb|EJT80427.1| transcription elongation factor SPT6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1410
Score = 309 bits (792), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 276/1124 (24%), Positives = 515/1124 (45%), Gaps = 92/1124 (8%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLW 121
+ + L+ + ++++PF+ +RK+ + + + + E+N ++D + L LW
Sbjct: 324 VAKVLEFFVVDEVEVPFVFSHRKDYIIYMQRQEYERNASDSDGAPE-----KLLLQDDLW 378
Query: 122 AIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETE 181
I +LD K+ L ++++ L+ YK +T ++ +FD + + AET
Sbjct: 379 RILELDIKFRSLIEKRNVLEKTYKNL----------KTSAGVSDPIFDEM---VFKAETM 425
Query: 182 REVDDVDLKFNLHFPP-----GEVGVDEGQYKRP--KRSTKYSSCSKAGLWEVASKFGYS 234
E+ DV + G + +RP K ++ + A + +G
Sbjct: 426 EELQDVHDYMQFQYASQMKELAAAGAITKEVRRPGAKSTSGFERIRNANAYNFVKAYGIP 485
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
++L E EDP++ P E+A + + F++ V+ AR+M A E+ P +
Sbjct: 486 PDRLAQNALREGKKVIPEDPEKLPIELADSLCDSYFDTGDGVMNAARNMYAEELYQNPRM 545
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAE 352
R++ R + VS T G ID H F +K+L ++ + +L + KAE
Sbjct: 546 RRHFRVAYYAMGSVSCRRTEKGLRRIDESHPFYEIKYLLDQTIEDLVGRPEVFLKMMKAE 605
Query: 353 EEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
EE L++V + L ++ + + + SD S+ A WN++R L A L +
Sbjct: 606 EEGLVEVKLTLHQE--REFRKNLLAEFQSDNFSERADAWNEERRKALDVAFPK-LEKIIA 662
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PG 469
K + + + LL + ++ PY+ K + PR L G P
Sbjct: 663 KGVKDSLRTACQEDLLQICRTEFFRRIDQAPYKPKGLVLG----TTPRCLVISNGMADPN 718
Query: 470 KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA 529
+ + ++ + V++ G L RD+ ++ + + +P V+ +
Sbjct: 719 RDLLCWAYVEENDRVMEQGKFGSLG------RDEAARNA----FCELVERRRPDVIGVSG 768
Query: 530 VNLSCTSLKDDIYEII-------FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRIS 582
+ L D+ +I + + +V E+ E+ +V ++ + RLY++S +
Sbjct: 769 WSADTNRLVRDLETLINDRGLMGNEFEDPETEEVRTELLEVLVV--NDEVARLYKDSPRA 826
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE 642
P + +ALGRYLQNPL A L G++I S + P +N L D+ + + E
Sbjct: 827 VADHPTLNPVTRYCIALGRYLQNPLKEYANL---GKDITSLAIHPCQNLLPQDKLFKVFE 883
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF-TRKDFV- 700
+VDV N VG+DIN A++ + L +++GLGPRKA ++ +++ + G I +R + V
Sbjct: 884 TALVDVVNLVGVDINEAVNDPYTATLLPYVAGLGPRKATAVIKAIHKNGGIVSSRAELVG 943
Query: 701 -----TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK-- 753
+G V+ N V L + +S D LD TR+HPE Y L +++A
Sbjct: 944 DPDRGKVPVVGPHVWNNCVSSLIIDYDATNEAS----DPLDSTRVHPEDYELGRKMAADA 999
Query: 754 -EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLI 809
E+ D+ + D+ + + D + + +L+ + ++ K + KR TLY I
Sbjct: 1000 LELDEEDVRTAVEDNGPGAVVRMLFKEDSQEKVNELVLEEYAEQLEAKYHQRKRATLYTI 1059
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
R EL+ +++ R + S DE F M +GET+D+L +G +V VR V+ + AI L+ G
Sbjct: 1060 RSELLGPYEELRRHFITLSPDEIFTMFTGETKDSLCKGMIVPINVRVVKEEFAIVKLDCG 1119
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
+ G + + S E+ L G K+ I + + L RE +M ++
Sbjct: 1120 IEGRIEAHEVSTRHSVREI---LQVGQTTRAKVLDISRKDFMCRLSVRE-DMLQVPFRRH 1175
Query: 930 QNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPG 989
Q+ + + R Q ++ K+ + +R+I HP F+ + +A + L ++ G
Sbjct: 1176 QDYNSRNWDFRLETQDTEDMTEKDNGTGR---AQRVIKHPMFKPFNSTQAEEYLGSQPSG 1232
Query: 990 ESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED-TFED 1048
E ++R SS+G +L +T KV D VY H D++E K+++ +G+TLK+ T+ D
Sbjct: 1233 EVVVRSSSKGNDHLAVTWKVADNVYQHVDVLELDKENE-----FSVGRTLKVANKYTYSD 1287
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG 1108
LDE++ +I + + ++ + KF+KGS+++++ L P R Y F + +HPG
Sbjct: 1288 LDELIVDHIKAMSKKVDELMRHEKFQKGSRSDLERWLTTYMDANPNRSTYAFCLDTKHPG 1347
Query: 1109 TFILTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
F+L + RS+ + + P+ F+ + D+ L F+
Sbjct: 1348 YFVLCFKASRSSRIGSWSVRVIPQAFEMMGNQYPDVRALCNGFK 1391
>gi|405118676|gb|AFR93450.1| transcription elongation factor SPT6 [Cryptococcus neoformans var.
grubii H99]
Length = 1506
Score = 308 bits (789), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 311/1218 (25%), Positives = 531/1218 (43%), Gaps = 142/1218 (11%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+++ +Q L++P++ Y K + SLL++ Q+ V D+ LW ++ L
Sbjct: 349 LNMMFVQHLEVPYLWHY-KRDVFSLLENQGQSSVLFLERDE------------LWQVYVL 395
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDE--TRLALNQQLFDSISKSLEAAETEREV 184
+++ + +R + + K + I DE T+ L + SI + E AE
Sbjct: 396 GQRYRAIHERNEQTRQQWGK-IKARKGDIEDEYFTKGLLGKACVASIEAAGEGAEWLAYH 454
Query: 185 DDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS- 243
D+K E DE K P+R+ + + + ++ FG + ++
Sbjct: 455 YASDIKAIKE----EEAFDEVSKKLPERAEQ-EDIRRGRIMKLVEAFGIDTNKVASSFQD 509
Query: 244 LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM 303
+ + +P + P E+A F A ++S + L A + E+S +P +R+ R FM
Sbjct: 510 VHGQPAPVMNPDKMPLELADEFTGAAYSSPEQALSAASFVLVQELSKDPAIRQQARD-FM 568
Query: 304 DNA-VVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA-QWLLIQKAEEEKLLQVTI 361
D +V+ T G SAID +H + K+L KP+ F D+ Q++ + KAEEE L+ +
Sbjct: 569 DACGLVTVNATDRGMSAIDQYHLYYNFKFLTNKPVLDFRDSPQFIHMLKAEEEGLISIAF 628
Query: 362 KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSG 421
+PED L S+ + A WN+ R + + L+P K + +
Sbjct: 629 DIPEDMLASFTDALIRCCRSNDYGEIALAWNEVRVEVCNMLVKKHLMPMASKWIKEHLRA 688
Query: 422 RAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG--KPETTFVMLD 479
+A+ ++ + L +V+V PY + ++ P VLA G G + VMLD
Sbjct: 689 QAEEYVAERCREELELRVNVRPYASS----SMEQGETPSVLAITNGKGDIRDAVMAVMLD 744
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
G V R+Q D + D+ ++ + +P VVV+G ++ LKD
Sbjct: 745 DEGNV-----------RTQTKFDNLRDEEDKTMFIELLEKRKPKVVVIGGFSVQTARLKD 793
Query: 540 DIYEIIFKMVEE-----------HPRDVGH-----EMDE------LSIVYGDESLPRLYE 577
I + E +P G E DE + +++ +++ RLY
Sbjct: 794 AALAAIRQHAIELLGQNPPVSDAYPDHEGFQYAMAEYDEKLKAHLIPLIFVNDATARLYM 853
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
+S + + P N + A+ L RY QNPL C GR I S L P EK
Sbjct: 854 SSEEAEKEHPNLPLNGRYALGLARYAQNPLN---AYCKLGRHIASVTFMEHHQKLIPHEK 910
Query: 638 YGM-IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTR 696
+E+ +V+ +G++IN + +Q A L +I+GLGPRKA ++ + + GA+ R
Sbjct: 911 LLYHLERGLVNSVCFMGIEINSCVADPYQRAMLPYIAGLGPRKADAVIYGIQKHGALINR 970
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSG-----QAASSSQFIDLLDDTRIHPESYGLAQEL 751
F G +F N GFL + +A + + D LD TRIHPE+Y AQ++
Sbjct: 971 MAFTDLGLFGPTIFENTAGFLTIESDLKDMMLEAENPQEQPDPLDMTRIHPENYEFAQKM 1030
Query: 752 AKEVYNRDIEGDLNDDEDALEMAIEHVRDR--PDLLKTYLLDR----------------H 793
+DAL++ +E V DR ++++T +LD +
Sbjct: 1031 C---------------QDALDLDVEDVADRHKSEVVQTLMLDDKRGKKLGELNLDDFAFN 1075
Query: 794 IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQAT 853
++ + NKR TL I ELI D R + P+ E M++GETE T+ G V AT
Sbjct: 1076 LQRQGEGNKRHTLGEIVSELIRYRSDRRPAFYVPTDWEIVTMVTGETERTVGRGLKVTAT 1135
Query: 854 VRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELS---DKLHEGDILTCKIKSIQKNRY 910
VR+ R C LESGL +L + DY D + ++ + + + + R+
Sbjct: 1136 VRKAISARVFCQLESGLDAVL-ERDYVADEDQAPVTSCDEVFKPRQAIKGVVIMPEPARF 1194
Query: 911 QVFLVCRESEMRNNRYQHCQNLDPYYHEERSS--RQSEQEKARKEKELAKKHFKERLIVH 968
QV + R S++R Q + P+ EE +S R+ E A K+ + +R++ H
Sbjct: 1195 QVRISTRSSDLR----QGVDFVQPFKDEEYNSKDRRDAAEAATAAKKQRRAGKVQRIVNH 1250
Query: 969 PCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKD 1028
P + + + +A + L+++ G+ +IRPSS+GP + +T KV + VY H D+ E K ++
Sbjct: 1251 PNWHVLNSGQAEQFLASQHRGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNE- 1309
Query: 1029 IKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRI 1087
+G+ L + G+ + DLD+++ ++ + + K++ + E+D L+
Sbjct: 1310 ----YSLGRILMVSGQYRYSDLDDLIINHVKATARKFDEIQMHEKYK--PEHELDAFLKN 1363
Query: 1088 EKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPK-----GFKFRKRMFEDI 1142
P R +YGF + + PG L ++ I +P +K + +
Sbjct: 1364 YVQAHPGRSIYGFSVDSDRPGYLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGV 1423
Query: 1143 DRLVAYFQRHIDDP---QGDSAPSIRSVAAMVPM----RSPANGGSTASAGS---GWGGS 1192
L F+ + QG + PM R+PA G T + GS G
Sbjct: 1424 TELSNAFKMQYSEKLAEQGHQGKTPGIYLGKTPMHLGGRTPALGSRTPAMGSRTPALGSR 1483
Query: 1193 TNEGGWNRDRSSTPGSRT 1210
T G R+ GSRT
Sbjct: 1484 TPALG---SRTPALGSRT 1498
>gi|213409974|ref|XP_002175757.1| transcription elongation factor Spt6 [Schizosaccharomyces japonicus
yFS275]
gi|212003804|gb|EEB09464.1| transcription elongation factor Spt6 [Schizosaccharomyces japonicus
yFS275]
Length = 1372
Score = 308 bits (788), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 266/960 (27%), Positives = 444/960 (46%), Gaps = 63/960 (6%)
Query: 208 KRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF 265
+RP S Y K+ L+ + FG ++ GL L E+ +EDP P +A +
Sbjct: 446 RRPHVSKYAFYEKTRKSSLYNLVKAFGITATHYGLNLIQEEKLYPVEDPAVPPRVLAEQY 505
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQ 325
VL AR + A EI EP R++ R + A V T G ID H
Sbjct: 506 VTEELKDVDHVLSRARRIFAEEIFHEPQFRRHFRVKLLTLAKVDIVRTQKGLRKIDEDHP 565
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVS 385
F K+L+++ L + +L + KAEEE L+++ IK E + F + SD S
Sbjct: 566 FYKFKYLKDQNLLHIDPVLFLQMLKAEEEGLIKINIKFFELQDDN-FKSMLDFMTSDNCS 624
Query: 386 KSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
A+ WN+QRE++L+D LD +P+++KE + + L M L+NK+ P
Sbjct: 625 DVAKAWNEQREMVLRDVLDRTTQYMPALIKE---MCRSNHLNELGMLCRNQLYNKLDQAP 681
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPGKPETTF--VMLDSSGEVVDVLFTGCLTLRSQNVR 501
Y+ + + P V+A G G P V ++ GE + TL+ +
Sbjct: 682 YKPSGKNY--ELGTIPTVVAVSNGQGGPSDAVLCVYVNDLGEPEE-------TLKLTDFH 732
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
D +Q +F+ +P V+ + +++S +K ++ + D
Sbjct: 733 D----PTNQVMFAEFIEKVKPEVIGVSGMSVSANRVKLNVTTAL------------QSKD 776
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREIL 621
+ ++ ++ + R+Y NS ++++LP + VAL RY+Q+PL A L GR+I+
Sbjct: 777 PVDVIMVNDEVARIYTNSERAAEELPALPSLGRYCVALARYVQHPLLEYAAL---GRDIM 833
Query: 622 SWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAA 681
S ++ L + + +E +VDV+N VG+DIN A++ +++ + L +ISGLGPRKA
Sbjct: 834 SLSFHKWQHLLPQEMLWRYLESALVDVSNLVGIDINEAVNNKYEASILPYISGLGPRKAQ 893
Query: 682 SLQRSL-VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
+L + + G + TR D +T L K+F+N FL + +D+LD TRI
Sbjct: 894 ALLKKIAAHGGRLDTRSDLITKTILTGKIFINCASFLYIPNEDLPK-----MDILDSTRI 948
Query: 741 HPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE 800
H E Y LA+++A + D E + + + D L +L+ + + +RE
Sbjct: 949 HNEDYELARKMASDALELDEEDIEEYESQKGVVYHLITSNEVDKLDDLVLEEYADQLERE 1008
Query: 801 N---KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
KR TL IRREL + + RN + + E F M++G L +V V+RV
Sbjct: 1009 FHHLKRNTLERIRRELKDPYGERRNLFHILTPSEIFLMLTGIELTDLPPNTIVPVNVKRV 1068
Query: 858 QGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
+ L+ G+ G + E+ SDD L G + I ++ + + L R
Sbjct: 1069 TSRYVAVKLDCGIDGNITAEEVSDDHIPP--PQLLQTGQTVEAVILTLDEVNFTAELSMR 1126
Query: 918 ESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKE---RLIVHPCFQNV 974
+R + + E EK KEK LA+ ++ R+I HP F+N+
Sbjct: 1127 PYAIRTASETSKYSFSAW------DWDFEAEKRDKEKMLAETQAEQRAARVIKHPLFKNL 1180
Query: 975 TADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDI--KSL 1032
A +A L+ + G+ IIRPSS+GP ++ +T KV D +Y H D++E K+++ + L
Sbjct: 1181 NAAQAEAALAGMQRGDVIIRPSSKGPDHIVITWKVADNLYQHVDVLEMNKENEFSVGQRL 1240
Query: 1033 VGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEF 1092
+ G+ K+ + + DLDE++ +I + L M KFRKGS+ + + L
Sbjct: 1241 IITGRHEKMNYE-YSDLDELIVSHIKAIARKLDEMCMNEKFRKGSREDTERWLTSYSEAN 1299
Query: 1093 PTRIVYGFGISHEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
P R Y F EHPG +L + RS+ H + + P F ++ ++ L F+
Sbjct: 1300 PKRSCYAFCFDEEHPGYVLLCFKANRSSPVHAWPVKVIPNAFFLHGNVYANMTALCNGFK 1359
>gi|346974841|gb|EGY18293.1| transcription elongation factor SPT6 [Verticillium dahliae VdLs.17]
Length = 1412
Score = 307 bits (787), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 298/1192 (25%), Positives = 538/1192 (45%), Gaps = 128/1192 (10%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RK E +E+ WI N L + +G L I + L+
Sbjct: 282 RKPFKHLQLTAEQFKEEARWIANLLWPKKM-----------LQGDLLGPFTKAIGKVLEF 330
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE---RTPTLKWHKVLWAIHDL 126
+ +++P++ +RK+ + K +N + D+ D E L LW I +L
Sbjct: 331 FVVDGVEVPYVFQHRKDYLIHTKK--TRNPAHRDDPDAPEFILNADKLLTQDDLWRILEL 388
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF-DSISKSLEAAETEREVD 185
D K+ L ++++AL+ +T + +N + D I+++ E + D
Sbjct: 389 DIKFRSLMEKRNALEKTLDNL----------KTEMGVNDDILEDMITQAANMEELQDLQD 438
Query: 186 DVDLKFNLHFPP-GEVGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS 243
++ ++ + Q KRP + + ++ +++ +G + ++L
Sbjct: 439 YLNFQYAAQLKDLASMNGSAKQTKRPGSKGALFDKVRRSRVYDFVRAYGITPDRLARNAL 498
Query: 244 LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM 303
E +D E P+ +A + F + +VLQ AR M A E+ P +RK+ R+ F
Sbjct: 499 REGPKVWADDDNELPDNLADQYIDEDFPTGDSVLQAARQMYAEELFVSPRMRKHFRANFY 558
Query: 304 DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTI 361
+ +S T G ID H F +K+L + L ++ KAEE+ L++V +
Sbjct: 559 EMGDISCRRTEKGLRKIDESHPFYEIKYLTHQSFGDMARQPHLFLKMMKAEEDGLIEVKV 618
Query: 362 KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL--LPSMVKEA-RSL 418
+ D K + ++ ++SD S+ A WND+R +L+ A+ L + VKE+ R+
Sbjct: 619 SMENDEGFK--RNLRQEFVSDNYSERADRWNDERTKVLELAVPRLLKHVAKGVKESVRTA 676
Query: 419 MSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PGKPETTF 475
+ EY K K+ PY+ K + PRVL G PG+ T +
Sbjct: 677 CQDEVLTTCREEYSK----KIDQSPYKPKGMVLG----TTPRVLTFSNGMADPGRDATCW 728
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKND--QERLLKFMMDHQPHVVVLGAVNLS 533
+D G D + R +ND +E ++ + +P V+ + +
Sbjct: 729 AWMDEEGRFGD------------HGRFDNFTRNDAAREEFVELVKLRRPDVIGVSGWSAD 776
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDE-----LSIVYGDESLPRLYENSRISSDQLPG 588
L ++ II P E DE L ++ ++ + RLY++S + P
Sbjct: 777 THKLVRELENIISDKGLMGPEFDDPETDEYRAELLEVIVVNDEVARLYKDSPRAVADHPL 836
Query: 589 QKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDV 648
+ + L RY+QNPL A L G++I S P + L D+ +E MVD+
Sbjct: 837 LAPLTRYCIGLARYMQNPLKEYAAL---GKDITSLAFHPCQQLLPQDKLLKNLEFAMVDM 893
Query: 649 TNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV------T 701
N G+DIN A+ + L +++GLGPRKA S+ +++ G + +R + V
Sbjct: 894 VNLCGVDINEAVGDSYTANLLPYVAGLGPRKATSVLKAISANGGYVASRAELVGDIDSGK 953
Query: 702 AHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNR 758
+G +V+ N FL + +S D LD+TR+HPE Y L +++A E+
Sbjct: 954 IPVVGPRVWNNCASFLFIHFESTNPTS----DPLDNTRVHPEDYELGRKMAADALELDEE 1009
Query: 759 DIEGDLNDD-----------EDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLY 807
D++G+ + + +DA E E + L+ Y + +++K + KR TL
Sbjct: 1010 DVKGETDQNGPGAIVRKLFKDDAQEKVNELI------LEEYA--QQLEDKYSQKKRATLE 1061
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
IR EL +++ R + + E F M++GE++++LA G ++ VR V+ + AI L+
Sbjct: 1062 TIRAELQAPYEELRRNFVTLADSEIFTMLTGESKESLAVGMIIPVNVRVVKDEFAIVKLD 1121
Query: 868 SGLAGMLMKEDYSDDWRDSELSDK--LHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
G+ G + ++ R+ + K + G + K+ S++ + L E +++N
Sbjct: 1122 CGIEGRVEPNEHD---RNIGMGIKGVISVGQTVQAKLVSVEYKNFLAKLSIDERDIKNGY 1178
Query: 926 YQHCQNLDPYYH-----EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
+H YH +ER ++E K+K + +R+I H F+ EA
Sbjct: 1179 RKHM------YHPHGTWDERLEADDKEELREKDKSTGR---TQRVINHMLFKPFNGMEAE 1229
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
+ L + GE +IRPSS+G +L +T KV DGV+ H D++E K + +G+ L+
Sbjct: 1230 QWLGTQPNGEKVIRPSSKGNDHLAITWKVADGVFQHVDVLELQKPND-----FSLGQLLR 1284
Query: 1041 IGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGF 1100
+G+ T++DLDE++ YI+ +V + M+ + KF K S+A+V++ L PTR Y F
Sbjct: 1285 VGKMTYKDLDELIHGYIEGMVKKVDEMMQHDKFDKRSRADVEKWLTTYIDANPTRSAYAF 1344
Query: 1101 GISHEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
I+ +HPG F L + +S+ + + ++ +G++ K + D+ L F+
Sbjct: 1345 CINPKHPGYFWLCFKANKSSRVNAMPVKVHHEGYELLKNQYPDMRGLCNGFK 1396
>gi|320591470|gb|EFX03909.1| transcription elongation factor [Grosmannia clavigera kw1407]
Length = 1421
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 305/1209 (25%), Positives = 548/1209 (45%), Gaps = 149/1209 (12%)
Query: 2 FQKECRSLRKALAGPPTDGESIVDESTWIYNQL-----LSGTLPLFGQRGAGSPKEGHDL 56
FQ + + R P E +E+ W+ N L LS L + + G
Sbjct: 287 FQIDRKPFRNLQITP----EQFKEEARWVINLLWPTKQLSADLHVPFSKAVG-------- 334
Query: 57 SISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP-TLK 115
+ L+ + +++P++ +RK+ + + + + D++ + L
Sbjct: 335 --------KVLEFFVVDDVEVPYVFQHRKDYLIHARQPAGAGHRDEADGADYDVSAEKLL 386
Query: 116 WHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSL 175
LW I +LD K+ L +++AL+ + E R+ + L ++F+S+ +
Sbjct: 387 NQDDLWRILELDIKFRSLIDKRNALERSF-----ENVRQAF-----GLEDKMFESM---V 433
Query: 176 EAAETEREVDDVDLKFNLHFPPGEVGVD---EGQ-----YKRP--KRSTKYSSCSKAGLW 225
A T E+ D L+ LHF D EG KRP K ++ + KA +
Sbjct: 434 SEAATMEELQD--LQDYLHFEYASQLKDLVAEGSATREVTKRPGAKATSIFERIRKARAY 491
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDEL--EDPKETPEEMASNFKCAMFNSSQAVLQGARHM 283
A +G S+++L Q +L ++G ++ +D ++ P ++A + ++ +V+ AR M
Sbjct: 492 SFAKAYGISADRLA-QNAL-RLGKKVSADDDQKLPVDLADGLTDETYATADSVMAVARQM 549
Query: 284 AAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--E 341
A E+ P +RK R + N +VS T G ID H F +K+L + +
Sbjct: 550 YAEELFTSPRMRKLFRVAYYTNGLVSCHRTEKGLRKIDESHPFYEIKYLVNQTISDLARR 609
Query: 342 DAQWLLIQKAEEEKLLQVTIKL--PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELIL 399
+L + KAEEE L+ V + L D +L+++ + SD S A WN++R +L
Sbjct: 610 PEVFLKMMKAEEEGLVDVALTLQNERDFRRQLYTE----FASDNFSDRADAWNEERRKVL 665
Query: 400 KDA---LDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
A LD + + R+ EY K ++ P++ KD +
Sbjct: 666 DLAVPKLDRVIAKGVKDSLRTACQDEVLKICRDEYSK----RLDQAPFKPKDMVLG---- 717
Query: 457 AAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER--LL 514
+PRVLA G G P V GE V+ G ++D+ER +
Sbjct: 718 TSPRVLALSNGMGDPGRDPVFWAWVGEDGRVMEQGSFG---------NLARSDKERDAFV 768
Query: 515 KFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE-----LSIVYGD 569
+ +P V+ + + L DI +I + P E E L +V +
Sbjct: 769 GLIERRRPDVIGVSGFSADTNKLVRDIEGLISEKGLMGPEYEDAETSEYRSDLLEVVVVN 828
Query: 570 ESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLE 629
+ + RLY++S ++ + P ++ +ALGRYLQNP+ A L G+++ S +
Sbjct: 829 DEVARLYKDSDRAAREQPTLNPMIRYCIALGRYLQNPMKEYAAL---GKDVQSLLFHACQ 885
Query: 630 NFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVR 689
+ L D+ +E MVD+ N G++IN ++ + L +I+GLGPRKA+++ + +
Sbjct: 886 HLLPADKLTRALETAMVDMVNLCGVNINEVVNDAYAANLLPYIAGLGPRKASAVIKGINA 945
Query: 690 AGAIFTRKDFVTAHG-------LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
G + +D + +G +V+ N FL + + SS+ D LD+TR+HP
Sbjct: 946 NGGVVNSRDELVGDPDSGKLAVVGPRVWNNCASFLYI----EYDSSNPASDPLDNTRVHP 1001
Query: 743 ESYGLAQELAK---EVYNRDIEGDLNDD---------------EDALEMAIEHVRDRPDL 784
E Y L +++A E+ D++ + +++ E E+ +E D+ L
Sbjct: 1002 EDYELGRKMAADALELDEEDVKAETDENGPGAIVRKLFKEEEQEKVNELILEEYADQ--L 1059
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L+ Y + KR TL IR EL +++ R +Y D F M +GE++++L
Sbjct: 1060 LRNY----------NQKKRATLETIRAELQAPYEELRRKYVALGADMVFTMFTGESKESL 1109
Query: 845 AEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
E ++ VR V+ AI L+ G+ G + + S +R S + D L +G + K+
Sbjct: 1110 CENMIIPVVVRVVKDDFAIVKLDCGIEGRVEAHEVS--YRHS-IRDVLRQGQTVQAKLLE 1166
Query: 905 IQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKER 964
+ + + L RE +R Y+ + + + R Q ++ K+K + +R
Sbjct: 1167 LSRKDFSAKLSVREDALRRP-YRKFVDHERGTWDFRQEDQDREDMTEKDKTTGRT---QR 1222
Query: 965 LIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGK 1024
+I HP F+ A +A + L ++ G+ +IR SSRG +L +T KV DGVY H D++E K
Sbjct: 1223 VIKHPLFRPFNATQAEEYLGSQAAGDMVIRTSSRGNDHLVVTWKVADGVYEHIDVLELQK 1282
Query: 1025 DHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
+++ +G+ L+I G+ ++ DLDE++ ++ + + M+ KF+KG++A++++
Sbjct: 1283 ENE-----FSVGRLLRIGGKYSYTDLDELIVDHVKAMAKKVDEMMQNEKFQKGTRADIEK 1337
Query: 1084 LLRIEKAEFPTRIVYGFGISHEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFED 1141
L P R Y F + +HPG F L + R+T + + + PKGF+ K + D
Sbjct: 1338 WLTTYMDANPNRSSYAFCLDGKHPGYFFLCFKVNRNTRVNAWPVRVIPKGFELLKVAYPD 1397
Query: 1142 IDRLVAYFQ 1150
+ L F+
Sbjct: 1398 MRALTNGFK 1406
>gi|310793655|gb|EFQ29116.1| SH2 domain-containing protein [Glomerella graminicola M1.001]
Length = 1408
Score = 306 bits (785), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 285/1130 (25%), Positives = 513/1130 (45%), Gaps = 100/1130 (8%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE---RTPTLKWHKV 119
I + L+ + +++P++ +RK+ + K +N + D+ D E L
Sbjct: 322 IGKVLEFFVVDDVEVPYVFQHRKDYLIHAKK--TKNPDHRDDPDAPEWIVSADKLLTQDD 379
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I +LD K+ L ++++AL+ E A + D + + A
Sbjct: 380 LWRILELDIKFRSLIEKRNALEKTL-------------ENLKATSNVKDDVLEDMIPQAA 426
Query: 180 TEREVDDVDLKFNLHFPPG-------EVGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKF 231
T E+ D L+ LHF + + Q KRP +S + ++ + +
Sbjct: 427 TMEELQD--LQDYLHFQYAAELKDMSSINGNGNQMKRPGSKSNLFDRVRRSKAFGFVRAY 484
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
G + ++ E ED + P+++A + F + V+ AR M A E+
Sbjct: 485 GITPDRFAQNTLREGNKVWAEDDSQLPDDLADSLTDEEFQTGDTVMYAARQMYAEELFVN 544
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQ 349
P +RK+ R F +S T G ID H F VK+L + + + +L +
Sbjct: 545 PRMRKHFRVNFYQMGEISCRRTEKGLKKIDESHPFYEVKYLINQTIADVARQPELYLKMM 604
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLP 409
KAEEE L++V + L D ++ ++SD S+ A WN++R+ +L D + L
Sbjct: 605 KAEEEGLVEVKLTLENDE--GFRRQLRQEFISDNYSELADRWNEERQKVL-DLVVPRLSK 661
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG-- 467
+ K + + + +L + ++ PY+ K + PR++ G
Sbjct: 662 VIAKGVKESLRTACQEEVLKACREEYSKRLDQAPYKPKGMILG----TVPRIITLSNGMA 717
Query: 468 -PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
P + T +V ++ G V++ G L RD++++ E ++ + +P +
Sbjct: 718 DPARDPTCWVSVEEDGRVIEQGKLGNLA------RDERAR----EEFVEIVNRRRPDAIG 767
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE-----LSIVYGDESLPRLYENSRI 581
+ + L D+ +I + P E+ E L ++ + + RLY++S
Sbjct: 768 ISGWSADTQKLVRDLESLISEKGLMGPEFDDPELGEYRTEPLEVIVVTDEVARLYKDSPR 827
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI 641
+ + P + +AL Y+QNPL A L G++I S P +N L ++ +
Sbjct: 828 AVAEHPTLSSLTRYCIALAHYMQNPLKEYAAL---GKDITSLAFHPCQNLLPQEKLLKHL 884
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV 700
E MVD+ N G++IN A+ + L +++GLGPRKA S+ +++ GA+ +R + V
Sbjct: 885 ESAMVDMVNLCGVNINEAVGDSYTANLLPYVAGLGPRKATSVIKAINANGGAVSSRDELV 944
Query: 701 TAHGLGK------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK- 753
GK +V+ N FL + +S D LD+TR+HPE Y L +++A
Sbjct: 945 GDPDSGKLPVVGPRVWNNCASFLFIDYDATNPTS----DPLDNTRVHPEDYELGRKMAAD 1000
Query: 754 --EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYL 808
E+ D++ + + + + D + + +L+ + ++ +R + KR TL
Sbjct: 1001 ALELDEEDVKAETDHNGPGAIVRKLFKEDEQEKVNELILEEYAEQLERNYSQRKRATLET 1060
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLES 868
IR EL +++ R + +E F M +GET+DTLA+G ++ VR V+ AI L+
Sbjct: 1061 IRAELQAPYEELRRNFAPLGPNEIFTMFTGETKDTLAQGMIIPVNVRVVKDDFAIVKLDC 1120
Query: 869 GLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQH 928
G+ G + D D R + L G + K+ + + L RE+E++ Y+
Sbjct: 1121 GIEGRIEAHDGPDGVR---VRGILTTGQTVQAKVLEVNYKDFLAKLSAREAEVKRP-YKR 1176
Query: 929 CQNLDPYYH-----EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLL 983
P YH +ER ++E K+K + +R+I HP F+ EA + L
Sbjct: 1177 -----PLYHGHGQWDERLEAADKEELREKDKSTGR---TQRVIKHPLFKPFNGLEAEQWL 1228
Query: 984 SAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-G 1042
+ GE IIRPSS+G +L +T KV DGV+ H D++E K+ + +GK L++ G
Sbjct: 1229 GTQAAGEVIIRPSSKGNDHLAITWKVADGVFQHVDVLELQKETE-----FSVGKLLRVGG 1283
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+ T++DLDE++ +I+ + + M+ + KF K SK ++++ L P R Y + I
Sbjct: 1284 KFTYKDLDELIHEHIEAMSRKVDEMMQHEKFEKRSKTDLEKWLTTFIDANPNRSAYAYCI 1343
Query: 1103 SHEHPGTFILTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+HPG F L + RS+ + + + P GF+ K+ + D+ L F+
Sbjct: 1344 DPKHPGYFWLCFKASRSSRVNSWPVRVIPGGFELLKQAYPDMRALCNGFK 1393
>gi|169779946|ref|XP_001824437.1| transcription elongation factor spt6 [Aspergillus oryzae RIB40]
gi|238506036|ref|XP_002384220.1| transcription elongation factor SPT6, putative [Aspergillus flavus
NRRL3357]
gi|110826534|sp|Q2U561.1|SPT6_ASPOR RecName: Full=Transcription elongation factor spt6; AltName:
Full=Chromatin elongation factor spt6
gi|83773177|dbj|BAE63304.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690334|gb|EED46684.1| transcription elongation factor SPT6, putative [Aspergillus flavus
NRRL3357]
gi|391868601|gb|EIT77811.1| transcription elongation factor SPT6 [Aspergillus oryzae 3.042]
Length = 1422
Score = 306 bits (785), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 298/1175 (25%), Positives = 530/1175 (45%), Gaps = 108/1175 (9%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R +E S+++ L+ L ++PFI
Sbjct: 299 EQFREEAAWISN------LMLLKKRIEPELREPFQRSVAK-----VLEFLVTDDWEVPFI 347
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + +K +E + D + R L LW I D D K+ L ++++
Sbjct: 348 FQHRKDYMIHAVKAPVEGAGEDGDASQYTVRAEKLLNMTDLWDIFDHDLKFKALVEKRNT 407
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS-LEAAETEREVDDVDLKFNLHFPPG 198
+Q + YD + N + DS+ + L AA T E+ DV + +HF
Sbjct: 408 IQ------------KTYDNLQSLFN--VSDSVVEEMLPAAVTMEELQDV--QDYIHFQYA 451
Query: 199 EVGVD--------EGQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG 248
D G+ R K S+K + + + FG +++ E
Sbjct: 452 SQLRDMTLMNSDVNGETHRRKASSKTFFERVRNGKAYGLVRAFGITADAFAQNALKEGRR 511
Query: 249 DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV 308
EDP E PEEMA F F+++ V++ A+ + A EI P +RK +R + N V
Sbjct: 512 QYTEDPAERPEEMADGFVDNDFSNASHVIKAAKSLFAEEIVMSPKMRKVIRQAYYMNGAV 571
Query: 309 STCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLP-- 364
T G ID H + K+LR + L +L + KAEEE L++V ++
Sbjct: 572 DCFRTEKGLRRIDEQHPYYEFKYLRNQQLSDIARRPELYLRMLKAEEEGLVEVKVRFENF 631
Query: 365 EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGR 422
+ +L+ D + SD S+ A WN R +L AL L+ VKE +
Sbjct: 632 DQFRQRLYPDIE----SDNYSEIADGWNRSRRDVLDMALGKLERLINRSVKEN---IRQE 684
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP---GKPETTFVMLD 479
++ + E + ++ PY+ K + PRVLA G G+ + ++
Sbjct: 685 CENHVAKECRETFSQRLDQAPYKPKGMVLG----TVPRVLALSTGSGVVGREPIHWAYIE 740
Query: 480 SSGEVVDVLFTGCLTL--RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
G V++ L++ R +N+ D + D E ++ + +P V+ + ++ L
Sbjct: 741 EDGRVLENGKFVDLSIGDRDRNIPDGK----DVEAFVELVDRRRPDVIGVSGMSPETRRL 796
Query: 538 KDDIYEIIFK-------MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQK 590
+ E++ K ++H ++ D L ++ ++ + RLY++S + P
Sbjct: 797 YKLLAEVVDKKDLRGAPYTDDHDEEIS---DRLEVIIVNDEVARLYQHSERAKKDHPSFA 853
Query: 591 GNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTN 650
VAL +YLQ+PL A+L GR+I+S + P + +T + +E +VD+ N
Sbjct: 854 PLTHYCVALAKYLQSPLKEYASL---GRDIVSIQFKPGQQLVTQELLLKQLETALVDMVN 910
Query: 651 QVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAH----GL 705
VG+DIN A+ L ++ GLGPRKAA L + + + G + R + + + +
Sbjct: 911 LVGVDINEAVTDSSTANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVNAQYPAM 970
Query: 706 GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLN 765
G KV+ N FL + + D LD+TR+HPE Y +A+++A + D E D+
Sbjct: 971 GVKVWNNCASFLYIDFENVDPDA----DPLDNTRVHPEDYDIARKMAADALELD-EEDIK 1025
Query: 766 DDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
+ D ++ E +DR + L +++ + KR TL IR EL ++
Sbjct: 1026 AETDENGTGAIVRKLFREEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYE 1085
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
+ R QY S D+ F M++GET DTLAEG VV +++RV L+ G+ ++ + +
Sbjct: 1086 ELRKQYVFLSTDDIFTMLTGETSDTLAEGMVVPISIKRVSDDHIDGKLDCGIDALVPESE 1145
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHE 938
+D + D + ++ KI + + + + RE ++ + N
Sbjct: 1146 LTDRY-DIPVRALYSPHQTVSAKILFLNRKNFTCNVSLREEQVS----RPVSNTQDRLRG 1200
Query: 939 ERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSR 998
E RQ +Q++ +++ R+I HP F+ + +A + L ++ G+ +IRPSS+
Sbjct: 1201 EWDERQEQQDRESLQEKTQSGGRTMRVIKHPLFRPFNSTQAEEFLGSQSRGDVVIRPSSK 1260
Query: 999 GPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYI 1057
G +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD+++ ++
Sbjct: 1261 GHDHLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRYTYSDLDDLIFNHV 1315
Query: 1058 DPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRS 1117
+ + M+ + K++ G+K L P R Y F I +H G F L +
Sbjct: 1316 KAMAKKVDEMMLHEKYQDGTKDATYSWLETYTKANPKRSAYAFCIDPKHAGYFFLCFKAG 1375
Query: 1118 TNP--HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
N H + + P+G++ ++ + D+ L F+
Sbjct: 1376 ENARLHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1410
>gi|346321802|gb|EGX91401.1| transcription elongation factor SPT6, putative [Cordyceps militaris
CM01]
Length = 1408
Score = 306 bits (785), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 291/1184 (24%), Positives = 521/1184 (44%), Gaps = 115/1184 (9%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---DDIMRF 66
RK E DE+ WI NQL PK+G + + +
Sbjct: 284 RKQFKNLQLTAEQFRDEAKWISNQLW--------------PKKGLSQELQAPFGKAVGKV 329
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+ + ++++PF+ +RK+ L K + + D D ++ L LW I +L
Sbjct: 330 LEFFVVDEVEVPFVFQHRKDYLLHSKKIRKSTHDDPDGPDYSIQSDKLLNQDDLWRILEL 389
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D K+ ++K+AL+ + E+ R L ++ + + + + A T E+ D
Sbjct: 390 DIKFRSFIEKKNALEKTF------ENLRT-----LEVDDPMVEDM---IPEATTMEELQD 435
Query: 187 VDLKFNLHFPP-----GEVGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGL 240
+ + P + + Q K+P +S + +G S++QL
Sbjct: 436 LQDYLQFQYGPKLKDLAVMASNNAQVKKPGSKSNVLDRVRNGKAYYFVKAYGISADQLAK 495
Query: 241 QLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+ +D + P ++A FN+ V+ AR M A E++ P ++KY R
Sbjct: 496 NALRQGKKVTPDDDSQYPMDLADTLIDDNFNTGDQVINAARQMYAEELAASPRMKKYFRG 555
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQ 358
+ A +S T G ID H + +K+L+ + + + +L + KAEEE L++
Sbjct: 556 SYYQLAEISCRRTEKGLRKIDDTHPYYEIKYLQNQTIADLVHQPDTFLKMMKAEEEGLIE 615
Query: 359 VTIKLPE--DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEAR 416
+ + +P D +L+ + + S+ S A+ W ++R+ +L A L + K +
Sbjct: 616 IRLVMPSRFDFRKQLY----QEFESENFSDRAEQWREERKKVLDLAYPK-LEKGIAKNIK 670
Query: 417 SLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE---T 473
++ + +L + + K+ PY+ K + PRVLA G G P
Sbjct: 671 EVIRTFCQDEVLKMIRQDYYRKLDQAPYKPKGMILG----TTPRVLALSNGMGDPARDPI 726
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+ + G V++ G L RD+ + E ++ + +P V+ + +
Sbjct: 727 CWAWVPEDGRVLEQGKFGNLG------RDESQR----EAFVELVNRRRPDVIAVCGWSCD 776
Query: 534 CTSLKDDIYEIIFKMVE-----EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPG 588
L DI ++ + E P + ++L ++ D+ + RLY++S + + P
Sbjct: 777 THKLVRDIESLVSEKALMGPEFEDPETNDYRTEQLEVMVVDDEVARLYKDSPRAVAEHPS 836
Query: 589 QKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDV 648
+ VAL RY+QNP+ A L G++++S P + L D+ +E MVD
Sbjct: 837 LNPVTRYCVALARYMQNPMKEYAAL---GKDVISLSFHPCQKLLPQDKLAKYLESAMVDT 893
Query: 649 TNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV------T 701
N VG++IN A+ + L FI+GLGPRKA S+ +++ G++ TR++ V
Sbjct: 894 VNMVGVNINDAMVDTYTANLLPFIAGLGPRKATSVMKAINANGGSVNTREELVGDPESRK 953
Query: 702 AHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNR 758
+G +V+ N FL + +S D LD+TR+HPE Y L +++A E+
Sbjct: 954 LPVVGPRVWNNCASFLYIDYDATNPAS----DPLDNTRVHPEDYELGRKMAADALELDEE 1009
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIRRELIH 815
D++ +++++ + + + + +LD + + R + KR TL I EL
Sbjct: 1010 DVKAEIDENGPGAIVRKLFKQGEQERVNELVLDEYADQLLRNFNQRKRATLEAISAELQA 1069
Query: 816 GFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLM 875
+++ R + +Q E F + +GET+ TL EG +V +R + AI L+ G+ G
Sbjct: 1070 EYEELRRSFAPLTQTEIFTIFTGETKQTLCEGMIVPVNIRVARDDFAIAKLDCGIEGRAE 1129
Query: 876 KEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPY 935
+ + + D L G KI + + V L RE +R PY
Sbjct: 1130 AHEVTSL---PSVKDVLSVGQTARAKILEMDYKAFSVKLSMREDSLRI----------PY 1176
Query: 936 YHEERSSRQS---EQEKARKEKELAKKHFK---ERLIVHPCFQNVTADEAMKLLSAKEPG 989
R QE A KE+ K +R++ HP F+ +A + L ++ PG
Sbjct: 1177 KRPTNYGRDGWDYAQEAADKEELKVKDKTTGRTQRVVKHPNFKPFNGLQAEEFLGSQAPG 1236
Query: 990 ESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFED 1048
E IIRPSS+G +L +T KV D VY H D++E K+++ +GK L+I G T+ D
Sbjct: 1237 EVIIRPSSKGNDHLAITWKVADNVYQHIDVLEMQKENE-----FSVGKLLRIGGRYTYSD 1291
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG 1108
LDE++ ++ + + M+ + K++ S++E ++ L P R Y F I +HPG
Sbjct: 1292 LDELIVDHVKAMARKVDEMMRHDKYQNRSRSETEKWLTTYIDANPNRSAYAFCIDTKHPG 1351
Query: 1109 TFILTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
F L + R+ I + P+GF+ + + D+ L F+
Sbjct: 1352 YFWLCFKASRTAIVIGIPIRVIPQGFELKGYQYPDMRALCNGFK 1395
>gi|295663360|ref|XP_002792233.1| transcription elongation factor spt6 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279408|gb|EEH34974.1| transcription elongation factor spt6 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1423
Score = 306 bits (784), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 303/1188 (25%), Positives = 521/1188 (43%), Gaps = 102/1188 (8%)
Query: 6 CRSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR 65
C+ RK E +E+ WI N L L +R +E SI++
Sbjct: 273 CQVARKQYKHVILTEEQFKEEAIWISN------LMLLKKRLDPDLREPFQRSIAK----- 321
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + ++PFI +RK+ + K + + N D + + L LW I
Sbjct: 322 VLEFMITDDWEVPFIFQHRKDYLIHAAKVPVSPDRSNPDGPEYVVKAEKLLNMTDLWDIF 381
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREV 184
+ D K+ L +++ LQ Y +T ++ +F+S+ L A T E+
Sbjct: 382 EYDLKFRSLIDKRNTLQKTYDNL----------QTICNVHDDIFESM---LPQAVTMEEL 428
Query: 185 DDVDLKFNLHFPP-----------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGY 233
DV +P GE G + + K RS + +E+ FG
Sbjct: 429 QDVQEYLYFQYPAQLKDITIVNGSGENGTSKQRRKATTRSFS-ERVRNSRAYELVRAFGI 487
Query: 234 SSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPC 293
+++ E EDP E P+ A N +F + L+ A+ M A EI+ P
Sbjct: 488 TADAFAQNALKEGKRQYTEDPAEPPDVTADNLLDDIFTNGGHALKAAKAMFAEEITMSPK 547
Query: 294 VRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KA 351
+RK +R F N V+ T G +D H + K+LR + L L ++ KA
Sbjct: 548 MRKVMRQAFYMNGVIECFRTEKGLKRVDEQHPYYEFKYLRNQQLTDIARRPELFLRMLKA 607
Query: 352 EEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
EEE L+ V ++ + + + H +SD S+ A WN +R+ ++ AL L M
Sbjct: 608 EEEGLVDVKVRF--QNFDNFKKNLYSHIVSDNFSELADAWNRERKEVVDMALGK-LERIM 664
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---P 468
+ + + ++ + E +A ++ PY+ K + PRVLA G
Sbjct: 665 SRGVKENIRTECENHVAKECREAFSLRLDQAPYKPKGMILG----TIPRVLALSNGNGIV 720
Query: 469 GKPETTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
GK + ++ G V++ G T L + + D ++ + +P V+
Sbjct: 721 GKDPIYWAWVEEDGRVLE---NGKFTDLSPGDSGRMIADGKDVAAFVELVERRKPDVI-- 775
Query: 528 GAVNLSCTSLKDDIYEIIFKMVEE-------HPRDVGHEM-DELSIVYGDESLPRLYENS 579
G S + K +Y+ + +V + D E D L ++ ++ + RLY+ S
Sbjct: 776 GVSGFSPETRK--LYKQLSDLVSSKDLRGATYTNDYDEEANDLLEVIIVNDEVARLYQTS 833
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
+ + P VAL +YLQNP+ A+L GR+I+S + P + + D+
Sbjct: 834 ERAKMEHPSFAALTHYCVALAKYLQNPMKEYASL---GRDIVSIQFKPGQQLVPQDKILK 890
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKD 698
+E +VD+ N G+DIN A L ++ GLGPRKAA L + + + G + R +
Sbjct: 891 QLETALVDMVNLCGVDINEAATDTATANLLPYVCGLGPRKAAHLLKIINMNGGIVNNRIE 950
Query: 699 F--VTAH--GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
V AH +G KV+ N FL + S+ D LD+TR+HPE Y + +++A +
Sbjct: 951 LLGVNAHYPAMGVKVWNNCASFLYI----DYDSTDPDADYLDNTRVHPEDYDIGRKMAAD 1006
Query: 755 VYNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLY 807
D E D+ + D ++ E +DR + L +++ + KR TL
Sbjct: 1007 ALELD-EEDIKAETDENGQGAIVRKLVKEDAQDRVNDLILEEYAEQLEKNLNQRKRATLE 1065
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
IR EL +++ R Q+ S D F M++GET ++LAEG +V +++RV L+
Sbjct: 1066 TIRAELQQPYEELRKQFVFLSTDAIFTMLTGETHESLAEGMIVPISIKRVTDDHIDGKLD 1125
Query: 868 SGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQ 927
G+ + + + +D + D + + KI + + +Q + RESE+ +
Sbjct: 1126 CGIDAVAGEVEITDRY-DIPIRSLFAPHQTVQGKILYLNRKLFQANVSLRESEISKPYRR 1184
Query: 928 HCQNLDPYY--HEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSA 985
H L + +E + R++ +EKA R+I HP F+ A +A + L+
Sbjct: 1185 HFDRLRGEWDDRQEDADREASREKAETSGRTM------RVIKHPLFRPFNAAQAEEFLAP 1238
Query: 986 KEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GED 1044
+ G+ +IRPSS G +L +T KV +G+Y H DI+E K+++ +GK LK+ G
Sbjct: 1239 QSRGDVVIRPSSNGIDHLAVTWKVSEGIYQHLDILELDKENE-----FSVGKILKVGGRY 1293
Query: 1045 TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISH 1104
++ DLDE++ +I + + M+ + KF+ GSK + + L P R VY F I
Sbjct: 1294 SYSDLDELIVNHIKAMAKKVDDMMMHEKFQDGSKGDTERWLDTYTKANPRRSVYAFCIDP 1353
Query: 1105 EHPGTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
HPG F L + + + P+G++ ++ + D+ L F+
Sbjct: 1354 NHPGCFHLCFKAGEKAQLNSWTVKVIPQGYELQRNPYPDMMALCNGFK 1401
>gi|451993906|gb|EMD86378.1| hypothetical protein COCHEDRAFT_1147119 [Cochliobolus heterostrophus
C5]
Length = 1372
Score = 306 bits (784), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 304/1179 (25%), Positives = 537/1179 (45%), Gaps = 100/1179 (8%)
Query: 6 CRSLRKALAGPPTDGES-IVDESTWIYNQLLSGTLPLFGQRGAGSPKEG---HDLSISRD 61
R K + P D ++ + +E+TWI N L PK+G + L
Sbjct: 230 ARKPFKEIELTPEDMQARLTEEATWISNMLW--------------PKKGLPRYFLQPFEK 275
Query: 62 DIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLW 121
+ + L+ ++L+ ++PFI +RK+ + D + ++++N D R L LW
Sbjct: 276 AVRKVLEFINLEDYEVPFIFNHRKDYLIHAPSDNDFDDIDNPPPMD-ARPERLLNQADLW 334
Query: 122 AIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETE 181
+ D D K+ +++ AL+ Y E + +Y E +N D +S E
Sbjct: 335 EVFDFDLKFRAFAEKRDALRQNY-----ENLKSVYPE----INDTEIDELSSRAITIEEI 385
Query: 182 REVDDVDLKFNLHFPPGEVGVD-EGQYKRPKRSTKYSS---CSKAGLWEVASKFGYSSEQ 237
+E+ D L + EV + G KR + + SKA ++ G + E
Sbjct: 386 QELQDY-LHYRYSQEINEVRQEFNGTQKRANNARSFFDKLRSSKAN--QLVKAIGITPED 442
Query: 238 LGLQLSLEKMGD-ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
++ G +EDP EE+A A + +L+ + + ++ +R+
Sbjct: 443 FAKKVDGTSRGAYTIEDPPYKVEELADQLAEAP-ETGATLLRSTKLLFVQDLQMCSRLRR 501
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ-----WLLIQKA 351
Y+R F NA + T G I H + K+LR F D Q +L + KA
Sbjct: 502 YLRGSFYQNAEIDCIRTDKGMRKITEDHPYYEFKYLRRV---TFSDLQGRPDLFLKMLKA 558
Query: 352 EEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLP 409
E E L+QV I + + K + +E +SDGVS+ + WN R+ +L ALD ++
Sbjct: 559 ESEGLVQVKISMGNYAHFK--ARLQEKIVSDGVSEVSDTWNALRKELLNVALDKLQTVIA 616
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG 469
+ VKE + R + L + +NK+ PY+ K + + P VL G G
Sbjct: 617 NGVKET---LRARCEDELAASARENYYNKLDQAPYKLKSAPLG----SIPNVLCLSNGKG 669
Query: 470 K--PETTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
+ + +++ G V++ G L +R N + D E+L+ + +P V+
Sbjct: 670 QRGDAIMWAYVENDGRVLE---QGRLVEMRLGNAERGIPEGQDIEKLVDVIQRRRPDVIG 726
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHP----RDVGHEMDE-LSIVYGDESLPRLYENSRI 581
+ ++ L DI EII + P D G E +E L ++ ++ + RLY S
Sbjct: 727 VSGFSVETRKLYKDIQEIISQRGLTGPAYEDEDTGDERNEPLEVIMVNDEVARLYHTSAR 786
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI 641
++ + P + +ALGRYLQNPLA A+L GR+I+S P + + ++ +
Sbjct: 787 AAAEFPKYPALTRYCIALGRYLQNPLAEYASL---GRDIVSIPFIPNQTLIPQEKLLDRL 843
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV 700
+ MVD+ N VG+D+ ++ + ++ GLGPRKA L +++ + I +R D +
Sbjct: 844 DTAMVDMVNLVGIDLPETYDDKYLSKLIPYVCGLGPRKADRLIKAIQANSDEILSRFDLL 903
Query: 701 TAH-------GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
+G KVF N FL + SS D LD TR+HPE Y LA+++
Sbjct: 904 GVSESRDLKAAMGPKVFQNCASFLYIPYDPTEESS----DYLDYTRVHPEDYDLARKMVA 959
Query: 754 EVYNRDIEGDLNDDEDALEMAI--EHVRDRP-DLLKTYLLDRHIKEKKR---ENKRETLY 807
+ N D E + ++ A+ + VR+ DL+ L+ + E +R + KR TL
Sbjct: 960 DALNMDEEDVKAETDEGGPSAVVRKMVREETTDLVNDLALEDYAAEIERNFGQRKRATLE 1019
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
IR EL + +++ R + S DE F M++GET+++L EG VV T++R LE
Sbjct: 1020 TIRAELDNPYEEIRQIFALLSGDEMFTMLTGETKESLYEGMVVPVTIKRTFPDHIEVKLE 1079
Query: 868 SGLAGMLMKEDYSDDWRD--SELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
G+ G + + ++ + E I+ +I + + L R+ +R +
Sbjct: 1080 CGIEGGVSESEFPEGVGSGGQEPRHVYSSHQIVRARIVYLNRKALTAQLSLRDDLIRQPQ 1139
Query: 926 YQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSA 985
+ + E + +++ A KEKE+A R++ HP F + +A + L
Sbjct: 1140 KKPYDRAAGEWDE--AQEMQDKKAAEKEKEVASGR-PNRVVNHPLFFSFNTIQAEEYLGG 1196
Query: 986 KEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDT 1045
KE G+ +IRPSS+G +L +T KV + Y H D++E K ++ +GK LKIG+ T
Sbjct: 1197 KETGDLVIRPSSKGFDHLVVTWKVSNNAYQHLDVLEMNKANQ-----FSLGKQLKIGKHT 1251
Query: 1046 FEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHE 1105
+ DLDE++ +++ + + + +F+ G++ + ++ L P+R +Y F +
Sbjct: 1252 YSDLDELIVNHVEAMARKVTELTRDERFQPGTREDTEKWLENYCEANPSRSMYAFCSMPK 1311
Query: 1106 HPGTFILTY-IRSTNPHHEY-IGLYPKGFKFRKRMFEDI 1142
+PG F + + + + P + I + P F+ +K ++ D+
Sbjct: 1312 YPGHFWICFQMSAKGPKGAWGIKVVPNAFELQKHVYPDM 1350
>gi|119493340|ref|XP_001263860.1| transcription elongation factor SPT6, putative [Neosartorya fischeri
NRRL 181]
gi|119412020|gb|EAW21963.1| transcription elongation factor SPT6, putative [Neosartorya fischeri
NRRL 181]
Length = 1421
Score = 306 bits (784), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 295/1172 (25%), Positives = 534/1172 (45%), Gaps = 102/1172 (8%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R +E S+++ L+ L ++PFI
Sbjct: 298 EQFREEAAWISN------LMLLKKRIEPELREPFQRSVAK-----VLEFLVTDDWEVPFI 346
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + K ++ + D + + L LW I D D K+ L ++++A
Sbjct: 347 FQHRKDYMIHATKVPVDGAPADGDTSQYTVKAEKLLNMTDLWDIFDHDLKFRALVEKRNA 406
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLF-DSISKSLEAAETEREVDDVDLKF-----NL 193
+Q Y ++ ++N + D +S ++ E + D V ++ ++
Sbjct: 407 IQKTYDNL----------QSLFSVNDSVVQDMLSTAVTMEELQDVQDYVHFQYASQLRDI 456
Query: 194 HFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELED 253
+ GE D + K +S + + + FG +++ E ED
Sbjct: 457 NLMNGEANGDTHRRKATGKSF-FERVRNGKAYSLVRAFGITADAFAQNALKEGRRQYTED 515
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
P E PEEMA +F F+++ VL+ A+ + A EI P +RK +R + N V T
Sbjct: 516 PAERPEEMADSFIDNDFSNASHVLKAAKALFAEEIVMSPKMRKVIRQAYYMNGAVDCFRT 575
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLP--EDSLN 369
G ID H + K+LR + L + +L + KAEEE L++V ++ +
Sbjct: 576 EKGLRRIDEQHPYYEFKYLRNQQLSDIARQPELYLRMLKAEEEGLVEVKVRFENFDHFRQ 635
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGRAKSWL 427
+L+ D + SD S+ A +WN R +L AL L+ VKE + ++ +
Sbjct: 636 RLYPDIE----SDNYSEIADVWNRTRREVLDMALGKLERLINRSVKEN---IRQECENHV 688
Query: 428 LMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFVMLDSSGEV 484
E +A ++ PY+ K + PRVLA G G + + ++ G V
Sbjct: 689 AKECREAFSQRLDQAPYKPKGMVLG----TVPRVLAMSTGTGIVGRDPIHWAYVEEDGRV 744
Query: 485 VDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYE 543
++ G S RD+ S D E L++ + +P V+ G +S + K +Y+
Sbjct: 745 LE---NGKFVDLSIGDRDRSISDGKDVEALIELLERRRPDVI--GVSGMSPETRK--LYK 797
Query: 544 IIFKMVEEHPRDVGHEMDE--------LSIVYGDESLPRLYENSRISSDQLPGQKGNVKR 595
++ ++VE+ DE L +V ++ + RLY++S + P
Sbjct: 798 LLTELVEKKDLRGATYTDERDEEISDPLEVVIVNDEVARLYQHSERAKKDHPSFGPLTHY 857
Query: 596 AVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLD 655
VAL +YLQ+PL A+L GR+I+S + + + + +E +VD+ N VG+D
Sbjct: 858 CVALAKYLQSPLKEYASL---GRDIVSIQFKRGQQLVAQELLLKQLETALVDMVNLVGVD 914
Query: 656 INLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG----LGKKVF 710
IN A+ L ++ GLGPRKAA L + + + G + R + + + +G KV+
Sbjct: 915 INEAVTDTATANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVNAQYPAMGVKVW 974
Query: 711 VNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED- 769
N F+ + + D LD+TR+HPE Y +A+++A + D E D+ + D
Sbjct: 975 NNCASFMFIDFENADPDA----DPLDNTRVHPEDYDIARKMAADALELD-EEDIKAETDE 1029
Query: 770 ------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQ 823
++ + +DR + L +++ + KR TL IR EL +++ R Q
Sbjct: 1030 NGPGAIVRKLFRDEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYEELRKQ 1089
Query: 824 YKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDW 883
+ S D+ F M++GET DTLAEG VV +++R+ L+ G+ ++ + + +D +
Sbjct: 1090 FALLSTDDVFTMLTGETSDTLAEGMVVPMSIKRITDDHIDGKLDCGVDVLVPESELTDRY 1149
Query: 884 RDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYY--HEERS 941
D + L K+ + K + + RE ++ + ++ + +E
Sbjct: 1150 -DIPVRALYSLHQTLPAKVLFLNKKSFLCNVSLREEQVSRPAPRPRDHMRGEWDDRQEAK 1208
Query: 942 SRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPS 1001
R+ QEK + + R+I HP F+ + +A + L ++ G+ +IRPSS+GP
Sbjct: 1209 DREMLQEKTQSGGRVM------RVIKHPLFRPFNSTQAEEFLGSQSRGDVVIRPSSKGPD 1262
Query: 1002 YLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPL 1060
+L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD+++ ++ +
Sbjct: 1263 HLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRYTYSDLDDLIFNHVKAM 1317
Query: 1061 VSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNP 1120
+ M+ + K+++GSK L P R Y F I +HPG F+L + N
Sbjct: 1318 AKKVDEMMLHEKYQEGSKDATYSWLNTYTKANPRRSAYAFCIDPKHPGYFLLCFKAGENA 1377
Query: 1121 --HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
H + + P+G++ ++ + D+ L F+
Sbjct: 1378 QLHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1409
>gi|67525931|ref|XP_661027.1| hypothetical protein AN3423.2 [Aspergillus nidulans FGSC A4]
gi|40743712|gb|EAA62900.1| hypothetical protein AN3423.2 [Aspergillus nidulans FGSC A4]
Length = 1413
Score = 306 bits (783), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 302/1176 (25%), Positives = 535/1176 (45%), Gaps = 117/1176 (9%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
+E+ WI N L L +R +E S+++ L+ L ++PFI +R
Sbjct: 293 EEAAWIAN------LMLLKKRLEPELREPFQRSVAK-----VLEFLVTDDWEVPFIFQHR 341
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVL-----WAIHDLDKKWLLLQKRKSA 139
K+ + +K VN + DD T+K K+L W I D D K+ L ++++
Sbjct: 342 KDYMIHTVK----VPVNGASADDSSSQYTIKAEKLLNMTDLWDIFDYDLKFKALVEKRNT 397
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS-LEAAETEREVDDVDLKFNLHFPPG 198
+Q + YD R + + D I + L A T E+ D+ + LHF
Sbjct: 398 IQ------------KTYDNIRSVFSVE--DPIVEEMLPIATTMEELQDI--QDYLHFQYA 441
Query: 199 EV--------GVDEGQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG 248
G G+ +R K T+ + + + + FG +++ E
Sbjct: 442 SQIRDLTLTNGDTNGEVQRRKALTRNFFERVRNSKAYGLVRAFGITADAFAQNALKEGRR 501
Query: 249 DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV 308
ED E PE+MA FN+S VL+ A+ M A EI P +RK +R + N V
Sbjct: 502 QYTEDASERPEDMADGLVDNDFNNSSQVLKAAKGMFAEEIVMSPKMRKVIRQAYYMNGAV 561
Query: 309 STCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKLP-- 364
T G ID H + K+LR++ L + L ++ KAEEE L++V ++
Sbjct: 562 DCFRTEKGLRRIDEQHPYYEFKYLRDQQLSDIARSPELFLRMLKAEEEGLIEVKVRFENF 621
Query: 365 EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGR 422
E+ +L+ + + SD S+ A WN R + AL ++ VKE +
Sbjct: 622 ENFRKRLYPNIE----SDNYSELADSWNRLRREAVDLALGKLERVINRSVKEN---IRQE 674
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFVMLD 479
++ + E +A ++ PY+ K + PRVLA G G + + ++
Sbjct: 675 CENHVAKECREAFSQRLDQAPYKPKGMILG----TVPRVLALSTGTGIIGRAPIHWAYVE 730
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
G V++ G T S +D+ + D E L++ + +P V+ G +S + +
Sbjct: 731 EDGRVLE---NGKFTDLSLGDKDRGIADGKDLEALVELVNRRRPDVI--GVSGMSPETRR 785
Query: 539 DDIYEIIFKMVEE-------HPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQK 590
+Y+++ ++V+ + D E+ D L +V ++ + RLY+NS + P
Sbjct: 786 --LYKLLTEIVDAKDLRGALYTDDRDEEVSDRLEVVIVNDEVARLYQNSDRAKKDHPSFA 843
Query: 591 GNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTN 650
V L +YLQ+PL A+L GR+I+S + P + + + +E +VD+ N
Sbjct: 844 PLTHYCVGLAKYLQSPLKEYASL---GRDIVSIQFKPGQQLVAQELLLKQLETALVDMVN 900
Query: 651 QVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG-----L 705
VG+DIN A+ L ++ GLGPRKAA L + + G + + + G +
Sbjct: 901 LVGVDINEAVSDPATANLLPYVCGLGPRKAAHLLKIVNMTGGVVNSRFSLLGVGVQYPAM 960
Query: 706 GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLN 765
G KV+ N+ FL + A S D LD+TR+HPE Y +A+++A + D E D+
Sbjct: 961 GVKVWNNSASFLYIDYESADADS----DPLDNTRVHPEDYDIARKMAADALELD-EEDIK 1015
Query: 766 DDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
+ D ++ E +DR + L +++ + KR TL IR EL ++
Sbjct: 1016 AETDENGPGAIVRKLFREDAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYE 1075
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
+ R + S D+ F M++GET TLAEG VV +++ ++ L+ G+ ++ + +
Sbjct: 1076 ELRKHFVFLSTDDIFTMLTGETAQTLAEGMVVPISIKSIRDDHIEGKLDCGVDALVGESE 1135
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM-RNNRYQHCQNLDPYYH 937
+D + D + + K+ + + + + RE ++ R +R D +
Sbjct: 1136 MTDRY-DIPVRAIYSLHQTVPAKVMFLNRKTFTCNVSLREEQVSRPSR----PAADRAHA 1190
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSS 997
E RQ EQ++ E + R+I HP F+ + +A++ L ++ G+ +IRPSS
Sbjct: 1191 GEWDYRQEEQDREALEAKTQDGGRTMRVIKHPLFRPFNSTQAVEFLGSQSRGDVVIRPSS 1250
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRY 1056
+GP +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD+++ +
Sbjct: 1251 KGPDHLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRFTYSDLDDLIFNH 1305
Query: 1057 IDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI- 1115
+ + + M+ + K+++GSK + L P R Y F I +H G F L +
Sbjct: 1306 VKAMAKKVDEMMLHEKYQEGSKDSTYQWLETYTKANPRRSAYAFCIDPKHAGYFFLCFKA 1365
Query: 1116 -RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
H + + P+G++ ++ + D+ L F+
Sbjct: 1366 GEHAQVHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1401
>gi|357529052|sp|Q5B7Q7.2|SPT6_EMENI RecName: Full=Transcription elongation factor spt6; AltName:
Full=Chromatin elongation factor spt6
gi|259485590|tpe|CBF82740.1| TPA: Transcription elongation factor spt6 (Chromatin elongation
factor spt6) [Source:UniProtKB/Swiss-Prot;Acc:Q5B7Q7]
[Aspergillus nidulans FGSC A4]
Length = 1417
Score = 306 bits (783), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 302/1176 (25%), Positives = 535/1176 (45%), Gaps = 117/1176 (9%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
+E+ WI N L L +R +E S+++ L+ L ++PFI +R
Sbjct: 297 EEAAWIAN------LMLLKKRLEPELREPFQRSVAK-----VLEFLVTDDWEVPFIFQHR 345
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVL-----WAIHDLDKKWLLLQKRKSA 139
K+ + +K VN + DD T+K K+L W I D D K+ L ++++
Sbjct: 346 KDYMIHTVK----VPVNGASADDSSSQYTIKAEKLLNMTDLWDIFDYDLKFKALVEKRNT 401
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS-LEAAETEREVDDVDLKFNLHFPPG 198
+Q + YD R + + D I + L A T E+ D+ + LHF
Sbjct: 402 IQ------------KTYDNIRSVFSVE--DPIVEEMLPIATTMEELQDI--QDYLHFQYA 445
Query: 199 EV--------GVDEGQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG 248
G G+ +R K T+ + + + + FG +++ E
Sbjct: 446 SQIRDLTLTNGDTNGEVQRRKALTRNFFERVRNSKAYGLVRAFGITADAFAQNALKEGRR 505
Query: 249 DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV 308
ED E PE+MA FN+S VL+ A+ M A EI P +RK +R + N V
Sbjct: 506 QYTEDASERPEDMADGLVDNDFNNSSQVLKAAKGMFAEEIVMSPKMRKVIRQAYYMNGAV 565
Query: 309 STCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKLP-- 364
T G ID H + K+LR++ L + L ++ KAEEE L++V ++
Sbjct: 566 DCFRTEKGLRRIDEQHPYYEFKYLRDQQLSDIARSPELFLRMLKAEEEGLIEVKVRFENF 625
Query: 365 EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGR 422
E+ +L+ + + SD S+ A WN R + AL ++ VKE +
Sbjct: 626 ENFRKRLYPNIE----SDNYSELADSWNRLRREAVDLALGKLERVINRSVKEN---IRQE 678
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFVMLD 479
++ + E +A ++ PY+ K + PRVLA G G + + ++
Sbjct: 679 CENHVAKECREAFSQRLDQAPYKPKGMILG----TVPRVLALSTGTGIIGRAPIHWAYVE 734
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
G V++ G T S +D+ + D E L++ + +P V+ G +S + +
Sbjct: 735 EDGRVLE---NGKFTDLSLGDKDRGIADGKDLEALVELVNRRRPDVI--GVSGMSPETRR 789
Query: 539 DDIYEIIFKMVEE-------HPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQK 590
+Y+++ ++V+ + D E+ D L +V ++ + RLY+NS + P
Sbjct: 790 --LYKLLTEIVDAKDLRGALYTDDRDEEVSDRLEVVIVNDEVARLYQNSDRAKKDHPSFA 847
Query: 591 GNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTN 650
V L +YLQ+PL A+L GR+I+S + P + + + +E +VD+ N
Sbjct: 848 PLTHYCVGLAKYLQSPLKEYASL---GRDIVSIQFKPGQQLVAQELLLKQLETALVDMVN 904
Query: 651 QVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG-----L 705
VG+DIN A+ L ++ GLGPRKAA L + + G + + + G +
Sbjct: 905 LVGVDINEAVSDPATANLLPYVCGLGPRKAAHLLKIVNMTGGVVNSRFSLLGVGVQYPAM 964
Query: 706 GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLN 765
G KV+ N+ FL + A S D LD+TR+HPE Y +A+++A + D E D+
Sbjct: 965 GVKVWNNSASFLYIDYESADADS----DPLDNTRVHPEDYDIARKMAADALELD-EEDIK 1019
Query: 766 DDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
+ D ++ E +DR + L +++ + KR TL IR EL ++
Sbjct: 1020 AETDENGPGAIVRKLFREDAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYE 1079
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
+ R + S D+ F M++GET TLAEG VV +++ ++ L+ G+ ++ + +
Sbjct: 1080 ELRKHFVFLSTDDIFTMLTGETAQTLAEGMVVPISIKSIRDDHIEGKLDCGVDALVGESE 1139
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM-RNNRYQHCQNLDPYYH 937
+D + D + + K+ + + + + RE ++ R +R D +
Sbjct: 1140 MTDRY-DIPVRAIYSLHQTVPAKVMFLNRKTFTCNVSLREEQVSRPSR----PAADRAHA 1194
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSS 997
E RQ EQ++ E + R+I HP F+ + +A++ L ++ G+ +IRPSS
Sbjct: 1195 GEWDYRQEEQDREALEAKTQDGGRTMRVIKHPLFRPFNSTQAVEFLGSQSRGDVVIRPSS 1254
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRY 1056
+GP +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD+++ +
Sbjct: 1255 KGPDHLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRFTYSDLDDLIFNH 1309
Query: 1057 IDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI- 1115
+ + + M+ + K+++GSK + L P R Y F I +H G F L +
Sbjct: 1310 VKAMAKKVDEMMLHEKYQEGSKDSTYQWLETYTKANPRRSAYAFCIDPKHAGYFFLCFKA 1369
Query: 1116 -RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
H + + P+G++ ++ + D+ L F+
Sbjct: 1370 GEHAQVHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1405
>gi|396496992|ref|XP_003844869.1| similar to transcription elongation factor spt6 [Leptosphaeria
maculans JN3]
gi|312221450|emb|CBY01390.1| similar to transcription elongation factor spt6 [Leptosphaeria
maculans JN3]
Length = 1389
Score = 305 bits (782), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 285/1134 (25%), Positives = 521/1134 (45%), Gaps = 88/1134 (7%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT-------LK 115
+ + L+ ++++ ++PFI +RK+ + K+ N+D +DD E P L
Sbjct: 291 VRKVLEFINIEDYEVPFIFNHRKDYLIHAPKN------NDDFDDDIENAPPPGARPERLL 344
Query: 116 WHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSL 175
LW + D+D K+ +++ AL+ Y + R + E + ++ D SK+L
Sbjct: 345 NQSDLWEVFDMDLKFRAFAEKRDALRLNY-----DNVRAVAPEIN---DTEIEDLASKAL 396
Query: 176 EAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSS 235
E + D + ++ + GQ + + + ++ G +
Sbjct: 397 TIEEIQELQDYLHYRYQHEISEVRQETNTGQKRANNARNFFDKLRSSKAQQLIQAIGITP 456
Query: 236 EQLGLQLSLEKMGDE-LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
E ++ G +EDP +E+A A + +L+ A+ + ++ +
Sbjct: 457 EDFAKKVDGTSRGAHVIEDPPMMVQELADQLAEAP-ETGLGLLKSAKLLFVQDLLMSSRL 515
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ-----WLLIQ 349
R+++RS F NA + T G I H + K+LR + F D Q +L +
Sbjct: 516 RRFLRSSFYQNAQIDCIRTDKGMRKITEDHTYYEFKYLRRQ---TFMDLQGRPDLFLKML 572
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--L 407
KAE+E L+QV I + + ++ + +E +SD VS+++ WN R+ +L +ALD +
Sbjct: 573 KAEQEGLVQVKIYM--GAYHQFKARLQEKIVSDNVSEASDSWNALRKELLDNALDKLQAI 630
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
+ + VKE+ + R + L + +NK+ P++ K + P VL G
Sbjct: 631 IANGVKES---LRARCEDELASRARENYYNKLDQAPFKLK----HAANGSVPNVLCLSNG 683
Query: 468 PGK--PETTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHV 524
G+ + +++ G V++ G L +R N + D +L+ + +P V
Sbjct: 684 KGQRGDAVMWAYVENDGRVLE---QGKLVEMRLGNQERGIPEGQDIAKLVDVVQRRRPDV 740
Query: 525 VVLGAVNLSCTSLKDDIYEII--FKM---VEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
+ + + L DI EII + + E + D L +V ++ + RLY S
Sbjct: 741 IGVSGFTVETRKLYKDIQEIINIYNLSGPAYEDEQTGADRSDPLEVVMVNDEVARLYHTS 800
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
++ + P + +ALGRYLQNPLA A+L G++I+S P + + ++
Sbjct: 801 ARAAAEFPKYSALTRYCIALGRYLQNPLAEYASL---GKDIVSIPFIPQQTLIPQEKLLE 857
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG-AIFTRKD 698
+E MVD+ N VG+D+ + L ++ GLGPRKA L +++ G I +R D
Sbjct: 858 KLETAMVDMVNLVGIDLPETYDDAYMSKLLPYVCGLGPRKADRLVKAIQANGDEILSRFD 917
Query: 699 FVTAH---------GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQ 749
+ +G KVF N FL + SS + D LD TR+HPE Y LA+
Sbjct: 918 LLGVSENTSRDLKAAMGPKVFQNCASFLYIPYD----SSEETSDYLDYTRVHPEDYDLAR 973
Query: 750 ELAKEVYNRDIEGDLNDDEDALEMAI--EHVR-DRPDLLKTYLLDRHIKEKKR---ENKR 803
++ + N D E + ++ A+ + VR D DL+ L+ + E ++ + KR
Sbjct: 974 KMVADALNMDEEDVKAETDEGGPSAVVRKMVREDTTDLVNDLALEDYADEIEKNFGQRKR 1033
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAI 863
TL IR EL + +++ R + S +E F M++GET++TL +G VV T+RR
Sbjct: 1034 ATLETIRAELENPYEEIRQIFALMSGEEIFTMLTGETKETLYDGMVVPVTIRRTFSDHIE 1093
Query: 864 CVLESGLAGMLMKEDYSDDWRD--SELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM 921
LE G+ G + + ++ + E ++ +I I + L RE +
Sbjct: 1094 VKLECGIEGGVSESEFPEGVGSGGQEPRHVYQPHQVVRARILFISRKALTAQLSLREDLI 1153
Query: 922 RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMK 981
R + + + + + ++++ A KEKE+A R++ HP F + +A +
Sbjct: 1154 RQPEKKLYDRAAGEWDDAQEA--ADKKAAEKEKEVATGR-PNRVVNHPLFFSFNTVQAEE 1210
Query: 982 LLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI 1041
L +KE G+ +IRPSS+G +L +T KV + Y H D++E K ++ +GK LKI
Sbjct: 1211 YLGSKETGDLVIRPSSKGFDHLVVTWKVSNNAYQHLDVLEMNKPNQ-----FTLGKQLKI 1265
Query: 1042 GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFG 1101
G+ T+ DLDE++ +++ + ++ + +F+ G+K E ++ L P R +Y F
Sbjct: 1266 GKMTYSDLDELIVLHVEAMARKVQELTRDERFQPGTKEETEQWLETYCIANPHRSMYAFC 1325
Query: 1102 ISHEHPGTFILTY-IRSTNPHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQRHI 1153
++PG F + Y + + P + I + P ++ +K ++ D+ L F+ I
Sbjct: 1326 SMPKYPGHFWICYQMGADAPRGAWPIKVVPNAYELQKHIYPDMVALKNGFKMLI 1379
>gi|358378821|gb|EHK16502.1| hypothetical protein TRIVIDRAFT_88065 [Trichoderma virens Gv29-8]
Length = 1412
Score = 305 bits (782), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 291/1166 (24%), Positives = 525/1166 (45%), Gaps = 108/1166 (9%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---DDIMRFLDLLHLQKLDIPFIA 81
+E+ WI NQL PK+G + + + L+ + ++++PF+
Sbjct: 302 EEARWITNQLW--------------PKKGLAQELQAPFGKAVGKVLEFFIVDEVEVPFVF 347
Query: 82 MYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQ 141
+RK+ L K + + D D ++ L LW I +LD K+ +++++L+
Sbjct: 348 QHRKDYLLHSKKIRKSTRDDPDGPDYTIQSDKLLNQDDLWRILELDIKFRSFVEKRNSLE 407
Query: 142 SYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD--LKFNLHFPPGE 199
+ +S + D + + + A T E+ D+ L+F +
Sbjct: 408 KSFDNL---KSMDVQDAM-----------VEEMIPEAATMEEIQDLQDYLQFQYANKLRD 453
Query: 200 VGVDEG---QYKRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
+ G Q KRP +S+ + + +G +++QL + +D +
Sbjct: 454 LASLSGTASQTKRPGSKSSLFDRVRNGKAYYFVKAYGITADQLAKNALRQGRKVAPDDHE 513
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
+ P ++A F++ V+ AR M A E+ P +RKY+R+ F A +S T
Sbjct: 514 QYPMDLADGLLDDSFSTGDQVINAARQMYAEELFASPRMRKYLRASFYQAAEISCRRTDK 573
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLPE--DSLNKL 371
G ID H + VK+++ + + + +L + +AEEE L+++ +++P D +L
Sbjct: 574 GLRKIDDTHPYYEVKYIQNQAIADLVHQPEVFLKMMRAEEEGLVEIKLEMPPRYDFRRQL 633
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
+ + + S+ S A+ W ++R+ +L A L + K + ++ + +L
Sbjct: 634 Y----QEFESENFSDRAEQWREERKKVLDLAYPK-LEKIVAKNIKEVIRTFCQDEVLKMC 688
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE---TTFVMLDSSGEVVDVL 488
+ + K+ PY+ K + PRVL G G P + ++ G V++
Sbjct: 689 RQEFYRKLDQAPYKPKGMILG----TTPRVLVLSNGGGDPTRDPVCWAWVEEEGRVLEQG 744
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII--- 545
G L RD+ ++N ++ + +P V+ + L D+ ++
Sbjct: 745 KFGNLG------RDETQREN----FVELVRRRRPDVIGVSGWASDTQKLVRDLEGLVSEK 794
Query: 546 --FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYL 603
E P + + L ++ ++ + RLY++S + + P + +AL RYL
Sbjct: 795 GLMGAEFEDPETNDYRTELLEVIVVEDEVARLYKDSPRAIAEHPSLNPVTRYCIALARYL 854
Query: 604 QNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
QNP+ A L G+++ S P +N L PD+ +E MVD N VG++IN A+
Sbjct: 855 QNPMKEYAAL---GKDVASLSFHPCQNLLPPDKLMKYLESAMVDTVNMVGVNINDAMTDT 911
Query: 664 WQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLGK------KVFVNAVGF 716
+ L F++GLGPRKA S+ +++ G + TR + V GK +V+ N F
Sbjct: 912 YTANLLPFVAGLGPRKATSVIKTINANGGVVNTRDELVGDPDSGKLPVVGPRVWNNCASF 971
Query: 717 LRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNRDIEGDLNDDEDALEM 773
L + SS D LD+TR+HPE Y L +++A E+ D++ + +++ +
Sbjct: 972 LYIEYDATNPSS----DPLDNTRVHPEDYELGRKMAADALELDEEDVKAETDENGPGAIV 1027
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
+D + + +LD + + +R + KR TL I EL +++ R + +
Sbjct: 1028 RKLFKQDEQERVNELVLDEYADQLQRNFSQRKRATLEAISAELQAPYEELRRSFALLTPS 1087
Query: 831 EEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSD 890
+ F M +GET+ TL EG +V VR V+ AI L+ G+ G + + S+ S + D
Sbjct: 1088 DVFTMFTGETKATLCEGMIVPVNVRMVRDDFAIVKLDCGIEGRIEGHEVSNR---SSVKD 1144
Query: 891 KLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKA 950
L G + KI + + L RE +R Y+ N + ++E
Sbjct: 1145 VLSSGQTVQAKILEMNYKDFMAKLSMREESLRIP-YKAPINFGRDGWDYALEAADKEELR 1203
Query: 951 RKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVY 1010
K+K + +R++ HP F+ + +A + L ++ PGE IIRPSS+G +L +T KV
Sbjct: 1204 EKDKTTGRT---QRVVKHPNFKPYNSIQAEEYLGSQPPGEVIIRPSSKGNDHLAITWKVA 1260
Query: 1011 DGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLS 1069
DGVY H D++E KD + +GK L+I G+ T+ DLDE++ ++ + ++ M+
Sbjct: 1261 DGVYQHIDVLEMQKDTE-----FSVGKLLRIGGKYTYSDLDELIVDHVKAMARKVEEMMR 1315
Query: 1070 YRKFRKGSKAEVDELLRIEKAEF-PTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGL- 1127
K++ S+ E E I + P R Y F I +HPG F L + S IGL
Sbjct: 1316 NDKYQNRSRNETAEKWLITYVDANPNRSAYAFCIDTKHPGYFWLCFKASKTAR--VIGLP 1373
Query: 1128 ---YPKGFKFRKRMFEDIDRLVAYFQ 1150
P+GF+ R + D+ L F+
Sbjct: 1374 VRTIPQGFELRGYQYPDMRALCNGFK 1399
>gi|115402921|ref|XP_001217537.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189383|gb|EAU31083.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1415
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 298/1176 (25%), Positives = 531/1176 (45%), Gaps = 120/1176 (10%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
+E+ WI N L L +R +E S+++ L+ L ++PFI +R
Sbjct: 298 EEAAWIAN------LMLLKKRIEPELREPFQRSVAK-----VLEFLVTDDWEVPFIFHHR 346
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVL-----WAIHDLDKKWLLLQKRKSA 139
K+ + +K V D D T K K+L W I D D K+ L ++++
Sbjct: 347 KDYVIHTVK------VPADGYDADSSQYTTKAEKLLNMTDLWEIFDHDLKFKALVEKRNT 400
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGE 199
+Q Y + + +Y+ +N + + + L A T E+ DV + +HF
Sbjct: 401 IQKTY-----DNIQSLYE-----VNDPVVEEL---LPVATTMEELQDV--QDYIHFQYAS 445
Query: 200 VGVD----------EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGD 249
D E Q ++ T + + + + FG +++ E
Sbjct: 446 QLRDLTLMNGDANGENQRRKATSKTFFERVRNGKAYGLVNAFGITADAFAQNALKEGRRQ 505
Query: 250 ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
EDP P+EMA F F+++ V++ A+ M A EI P +RK VR + N V
Sbjct: 506 YTEDPTSRPDEMADGFVDNDFSNASHVVKAAKSMFAEEIVMSPKMRKVVRQAYYMNGAVD 565
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLP--E 365
T G ID H + K+LR + L +L + KAEEE L++V ++ +
Sbjct: 566 CFRTEKGLRRIDEQHPYYEFKYLRNQQLSDIARRPELYLRMLKAEEEGLVEVKVRFENFD 625
Query: 366 DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGRA 423
+L+ D + SD S+ A WN R +L AL L+ VKE +
Sbjct: 626 HFRQRLYPDIE----SDNYSELADAWNGLRREVLDMALGKLERLINRSVKEN---IRQEC 678
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFVMLDS 480
++ + E +A + ++ PY+ K I PRVL G G + + ++
Sbjct: 679 ENHVAKECREAFYQRLDQAPYKPKGMVIG----TIPRVLTLSTGSGIVGRDPIHWAYIEE 734
Query: 481 SGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
G V++ G T L +V + D + LL + +P V LG ++ + +
Sbjct: 735 DGRVLE---NGKFTDLSVGDVDRGVADGKDLDALLDLIERRRPDV--LGVSGMTPETRR- 788
Query: 540 DIYEIIFKMVEE-------HPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQKG 591
+Y+++ + +E+ + D+ E+ D + ++ ++ + RLY++S + P
Sbjct: 789 -LYKLLCEAIEKKDIRSAPYTNDMNKEVRDPMEVIIVNDEVARLYQHSERARKDHPSFGP 847
Query: 592 NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ 651
VALG+YLQ+PL A+L GR+I+S + P + ++ D +E +VD+ N
Sbjct: 848 LTHYCVALGKYLQSPLKEYASL---GRDIVSIQFKPGQQLISQDLLLKQLETALVDIVNM 904
Query: 652 VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG----LG 706
VG+DIN A+ L ++ GLGPRKAA L + + + G + R + + + +G
Sbjct: 905 VGVDINEAVIDTATANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVNAQYPAMG 964
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND 766
KV+ N FL V + D LD+TR+HPE Y +A+++A + D E D+
Sbjct: 965 VKVWNNCASFLYV----DFQQTDPDADPLDNTRVHPEDYDIARKMAADALELD-EEDIKA 1019
Query: 767 DED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQD 819
+ D ++ E +DR + L +++ + KR TL LIR EL +++
Sbjct: 1020 ETDENGTGAIVRKLFREQAQDRVNDLILEEYAEQLEKNLNQRKRATLELIRAELQGPYEE 1079
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
R Q S D F M++GET +TL+EG VV +++RV L+ G+ ++ + +
Sbjct: 1080 LRKQLVFLSTDAIFTMLTGETSETLSEGMVVPVSIKRVSDDHIDGKLDCGVEALVPESEL 1139
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYY--H 937
+D + D + + KI + + + + RE ++ + + +
Sbjct: 1140 TDRY-DIPVRALYAPHQTVPAKILFLNRKNFTCNVSLREEQVSRPVAKVPDRMPTEWDDR 1198
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSS 997
+ER R++ QEK + R+I HP F+ + +A + L + G+ +IRPSS
Sbjct: 1199 QERQDREALQEKTQSGGRTM------RVIKHPLFRPFNSTQAEEFLGTQSRGDVVIRPSS 1252
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRY 1056
+GP +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD+++ +
Sbjct: 1253 KGPDHLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRYTYSDLDDLIFNH 1307
Query: 1057 IDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIR 1116
+ + + M + K++ G++ + L P R Y F I +H G F L +
Sbjct: 1308 VKAMAKKVDEMTLHEKYQDGNRDATYQWLETYTKANPKRSAYAFCIDPKHAGYFFLCFKA 1367
Query: 1117 STN-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
P H + + + P+G++ ++ + D+ L F+
Sbjct: 1368 GERAPLHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1403
>gi|451856806|gb|EMD70097.1| hypothetical protein COCSADRAFT_107399 [Cochliobolus sativus ND90Pr]
Length = 1411
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 301/1174 (25%), Positives = 534/1174 (45%), Gaps = 100/1174 (8%)
Query: 11 KALAGPPTDGES-IVDESTWIYNQLLSGTLPLFGQRGAGSPKEG---HDLSISRDDIMRF 66
K + P D ++ + +E+TWI N L PK+G + L + +
Sbjct: 274 KEIELTPEDMQARLTEEATWISNMLW--------------PKKGLPRYFLQPFEKAVRKV 319
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+ ++L+ ++PFI +RK+ + D + ++++N D R L LW + D
Sbjct: 320 LEFINLEDYEVPFIFNHRKDYLIHAPSDNDFDDIDNPPPMD-ARPERLLNQADLWEVFDF 378
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D K+ +++ AL+ Y E + +Y E +N D +S E +E+ D
Sbjct: 379 DLKFRAFAEKRDALRQNY-----ENLKSVYPE----INDTEIDELSSRAITIEEIQELQD 429
Query: 187 VDLKFNLHFPPGEVGVD-EGQYKRPKRSTKYSS---CSKAGLWEVASKFGYSSEQLGLQL 242
L + EV + G KR + + SKA ++ G + E ++
Sbjct: 430 Y-LHYRYSQEINEVRQEVNGTQKRANNARSFFDKLRSSKAN--QLVKAVGITPEDFAKKV 486
Query: 243 SLEKMGD-ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI 301
G ++DP EE+A A + +L+ + + ++ +R+Y+R
Sbjct: 487 DGTSRGAYTVDDPPYKVEELADQLAEAP-ETGATLLRSTKLLFVQDLQMCSRLRRYLRGS 545
Query: 302 FMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ-----WLLIQKAEEEKL 356
F NA + T G I H + K+LR F D Q +L + KAE E L
Sbjct: 546 FYQNAEIDCIRTDKGMRKITEDHPYYEFKYLRRV---TFSDLQGRPDLFLKMLKAESEGL 602
Query: 357 LQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKE 414
+QV I + + + +E +SDGVS+ + WN R+ +L ALD ++ + VKE
Sbjct: 603 VQVKISM--GNYAHFKARLQEKIISDGVSEVSDTWNALRKELLNVALDKLQTVIANGVKE 660
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK--PE 472
+ R + L + +NK+ PY+ K + + P VL G G+
Sbjct: 661 T---LRARCEDELAASARENYYNKLDQAPYKLKSAPLG----SIPNVLCLSNGKGQRGDA 713
Query: 473 TTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN 531
+ +++ G V++ G L +R N + D E+L+ + +P V+ + +
Sbjct: 714 IMWAYVENDGRVLE---QGRLVEMRLGNAERGIPEGQDIEKLVDVIQRRRPDVIGVSGFS 770
Query: 532 LSCTSLKDDIYEIIFKMVEEHP----RDVGHEMDE-LSIVYGDESLPRLYENSRISSDQL 586
+ L DI EII + P D G E +E L ++ + + RLY S ++ +
Sbjct: 771 VETRKLYKDIQEIISQRGLTGPAYEDEDTGDERNEPLEVIMVNNEVARLYHTSARAAAEF 830
Query: 587 PGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMV 646
P + +ALGRYLQNPLA A+L GR+I+S P + + ++ ++ MV
Sbjct: 831 PKYPALTRYCIALGRYLQNPLAEYASL---GRDIVSIPFIPNQTLIPQEKLLDRLDTAMV 887
Query: 647 DVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAH-- 703
D+ N VG+D+ ++ + ++ GLGPRKA L +++ + I +R D +
Sbjct: 888 DMVNLVGIDLPETYDDKYLSKLIPYVCGLGPRKADRLIKAIQANSDEILSRFDLLGVSES 947
Query: 704 -----GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
+G KVF N FL + SS D LD TR+HPE Y LA+++ + N
Sbjct: 948 RDLKAAMGPKVFQNCASFLYIPYDPTEESS----DYLDYTRVHPEDYDLARKMVADALNM 1003
Query: 759 DIEGDLNDDEDALEMAI--EHVRDRP-DLLKTYLLDRHIKEKKR---ENKRETLYLIRRE 812
D E + ++ A+ + VR+ DL+ L+ + E +R + KR TL IR E
Sbjct: 1004 DEEDVKAETDEGGPSAVVRKMVREETTDLVNDLALEDYAAEIERNFGQRKRATLETIRAE 1063
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
L + +++ R + S DE F M++GET+++L EG VV T++R LE G+ G
Sbjct: 1064 LDNPYEEIRQIFALLSGDEMFTMLTGETKESLYEGMVVPVTIKRTFPDHIEVKLECGIEG 1123
Query: 873 MLMKEDYSDDWRD--SELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQ 930
+ + ++ + E I+ +I + + L R+ +R + +
Sbjct: 1124 GVSESEFPEGVGSGGQEPRHVYSSHQIVRARIVYLNRKALTAQLSLRDDLIRQPQKKPYD 1183
Query: 931 NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGE 990
+ E + +++ A KEKE+A R++ HP F + +A + L KE G+
Sbjct: 1184 RAAGEWDE--AQEMQDKKAAEKEKEVASGR-PNRVVNHPLFFSFNTVQAEEYLGGKETGD 1240
Query: 991 SIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLD 1050
+IRPSS+G +L +T KV + Y H D++E K ++ +GK LKIG+ T+ DLD
Sbjct: 1241 LVIRPSSKGFDHLVVTWKVSNNAYQHLDVLEMNKANQ-----FSLGKQLKIGKHTYSDLD 1295
Query: 1051 EVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTF 1110
E++ +++ + + + +F+ G++ + ++ L P+R +Y F ++PG F
Sbjct: 1296 ELIVNHVEAMARKVTELTRDERFQPGTREDTEKWLENYCEANPSRSMYAFCSMPKYPGHF 1355
Query: 1111 ILTY-IRSTNPHHEY-IGLYPKGFKFRKRMFEDI 1142
+ + + + P + I + P F+ +K ++ D+
Sbjct: 1356 WICFQMSAKGPKGAWGIKVVPNAFELQKHVYPDM 1389
>gi|400599256|gb|EJP66960.1| transcription elongation factor SPT6 [Beauveria bassiana ARSEF 2860]
Length = 1410
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 299/1182 (25%), Positives = 526/1182 (44%), Gaps = 111/1182 (9%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---DDIMRF 66
RK E DE+ WI NQL PK+G + + +
Sbjct: 286 RKPFKNLQLTAEQFRDEAKWISNQLW--------------PKKGLSPELQAPFGKAVGKV 331
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+ + ++++PF+ +RK+ L K + + D D ++ L LW I +L
Sbjct: 332 LEFFVVDEVEVPFVFQHRKDYLLHSKKIRKSAHDDPDGPDYNIQSDKLLNQDDLWRILEL 391
Query: 127 DKKWLLLQKRKSALQSYYK--KRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREV 184
D K+ ++K+AL+ + K E E + + D A+ + + L+ +
Sbjct: 392 DIKFRSFIEKKNALEKTFDNLKSLEVEDQMVQDMMPEAITMEELQDLQDYLQFQYGPKLK 451
Query: 185 DDVDLKFNLHFPPGEVGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS 243
D V + N+ Q K+P +S+ + +G S++QL
Sbjct: 452 DLVVMAGNV-----------AQMKKPGSKSSLLDRVRNGKAYYFVKAYGISADQLAKNAL 500
Query: 244 LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM 303
+ +D + P ++A + FN+ V+ AR M A E+ P +RKY R+ +
Sbjct: 501 RQGKKVTPDDDSQYPMDLADSLIDDNFNTGDQVINAARQMYAEELYASPRMRKYFRNSYY 560
Query: 304 DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTI 361
A +S T G ID H + +K+L+ + + + +L + +AEEE L+++ +
Sbjct: 561 QLAEISCRRTDKGLRKIDDTHPYYEIKYLQNQTIADLVHQPDIFLKMMRAEEEGLIEIKL 620
Query: 362 KLPE--DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLM 419
+P D +L+ + + S+ S A+ W ++R+ +L DA L ++ K + ++
Sbjct: 621 IMPSRFDFRKQLY----QAFESENFSDRAEQWREERKKVL-DAAYPKLEKAIAKNIKEVI 675
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI-TPDEEAAPRVLACCWGPGKPETTFVML 478
+ +L + + K+ PY+ K + TP PRVLA G G P +
Sbjct: 676 RTFCQDEVLKMVRQDYYRKLDQAPYKPKGMVLGTP-----PRVLALSNGMGDPARDPICW 730
Query: 479 DSSGEVVDVLFTGCLTL--RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTS 536
E VL G + R +N RD ++ + +P V+ + +
Sbjct: 731 AWVPEDGRVLEQGKFSNLGRDENQRDA---------FVELVNRRRPDVIAVSGWSCDTHK 781
Query: 537 LKDDIYEIIFKMVE-----EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKG 591
L D+ ++ + E P + ++L ++ D+ + RLY++S + + P
Sbjct: 782 LVRDLESLVSEKALMGPEFEDPETNDYRTEQLEVMVVDDEVARLYKDSPRALAEHPSLNP 841
Query: 592 NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ 651
+ VAL RY+QNP+ A L G+++ S P ++ L D+ +E MVD N
Sbjct: 842 VTRYCVALARYMQNPMKEYAAL---GKDVSSLSFHPCQHLLPQDKVAKYLESAMVDTVNM 898
Query: 652 VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFV------TAHG 704
VG++IN A+ + L FI+GLGPRKA S+ +++ G++ TR++ V
Sbjct: 899 VGVNINDAMVDTYTANLLPFIAGLGPRKATSVIKAINANGGSVNTREELVGDPESRKLPV 958
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNRDIE 761
+G +V+ N FL + +S D LD+TR+HPE Y L +++A E+ D++
Sbjct: 959 VGPRVWNNCASFLYIDYDATNPAS----DPLDNTRVHPEDYELGRKMAADALELDEEDVK 1014
Query: 762 GDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQ 818
+++++ + + + + +LD + + R + KR TL I EL ++
Sbjct: 1015 AEIDENGPGAIVRKLFKQGEQERVNELVLDEYADQLLRNFNQRKRATLEAISAELQAEYE 1074
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
+ R + +Q E F + +GET+ TL EG +V +R + AI L+ G+ G E
Sbjct: 1075 ELRRSFAPLTQSEIFTIFTGETKQTLCEGMIVPVNIRVARDDFAIAKLDCGIEGR--AEA 1132
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHE 938
+ R S + D L G KI + + L RE +R PY
Sbjct: 1133 HEVTSRPS-VKDVLSVGQTTRAKILELDYKAFSAKLSMREDALRI----------PYKRP 1181
Query: 939 ERSSRQS---EQEKARKEKELAKKH----FKERLIVHPCFQNVTADEAMKLLSAKEPGES 991
R QE A KE EL +K +R++ HP F+ +A + L ++ PGE
Sbjct: 1182 INHGRDGWDYAQEAADKE-ELKEKDKTTGRTQRVVKHPNFKPFNGLQAEEFLGSQAPGEV 1240
Query: 992 IIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLD 1050
IIRPSS+G +L +T KV D VY H D++E K+++ +GK L+I G T+ DLD
Sbjct: 1241 IIRPSSKGNDHLAITWKVADNVYQHIDVLEMQKENE-----FSVGKLLRIGGRYTYSDLD 1295
Query: 1051 EVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTF 1110
E++ ++ + + M+ + K++ S++E ++ L P R Y F I +H G F
Sbjct: 1296 ELIVDHVKAMARKVDEMMRHDKYQNRSRSETEKWLTTYIDANPNRSAYAFCIDTKHSGYF 1355
Query: 1111 ILTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
L + R+ N I + P+GF+ + + D+ L F+
Sbjct: 1356 WLCFKASRTANVIGIPIRVIPQGFELKGYQYPDMRALCNGFK 1397
>gi|115464655|ref|NP_001055927.1| Os05g0494900 [Oryza sativa Japonica Group]
gi|113579478|dbj|BAF17841.1| Os05g0494900, partial [Oryza sativa Japonica Group]
Length = 342
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/183 (77%), Positives = 165/183 (90%)
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSSRGPS+LTLTLK++DGV AHK+I EGGKDHKDI SL+ +GKTL I +TFEDLDEV
Sbjct: 1 IRPSSRGPSFLTLTLKIFDGVLAHKEITEGGKDHKDITSLLRLGKTLTIDNETFEDLDEV 60
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFIL 1112
+DRY+DPLV HLK+ML YRKF+KGSK+EVDE+LR EK+E P RIVY FGISHEHPGTFIL
Sbjct: 61 IDRYVDPLVGHLKSMLLYRKFKKGSKSEVDEMLRAEKSENPMRIVYCFGISHEHPGTFIL 120
Query: 1113 TYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP 1172
+YIRSTNPHHEYIGLYPKGF+FRKR F++IDRLV+YFQ+HID P D+ PS+R+VAAMVP
Sbjct: 121 SYIRSTNPHHEYIGLYPKGFRFRKRDFDNIDRLVSYFQKHIDKPPPDAGPSMRNVAAMVP 180
Query: 1173 MRS 1175
M+S
Sbjct: 181 MKS 183
>gi|210075180|ref|XP_002142995.1| YALI0B01224p [Yarrowia lipolytica]
gi|199425118|emb|CAG82593.2| YALI0B01224p [Yarrowia lipolytica CLIB122]
Length = 1406
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 280/1118 (25%), Positives = 500/1118 (44%), Gaps = 80/1118 (7%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLK------- 115
+ + L+ + + L++PFI +R++ L + ++E +D E PTL+
Sbjct: 329 VSKVLEFIAKENLEVPFIWHHRRD----FLTHVSKHEKFKAKVEDDEYEPTLEAPVASTT 384
Query: 116 -----WHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ LD W+++Q +K+ + E R N +
Sbjct: 385 EETKEIEYTTVELLSLDDLWMIVQLDLD-YHGIVEKQQQLERLRTQAGVSKTGNHSFIND 443
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVG-VDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
+ S +T+ ++ V +F+ GE+G + G KR R +Y + L+ +
Sbjct: 444 FANSASLQDTQDAIEYVQFRFS-----GELGDLQSGSSKRHSRYARYDRIRASKLYGLVR 498
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF---KCAMFNSSQAVLQGARHMAAV 286
+FG SS++ L + ED P ++A+++ + + + + L+ A M A+
Sbjct: 499 QFGISSDEFAENLETSTRINYTEDNARAPADLATDYLNDSSLVLSDAASALESATQMFAM 558
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWL 346
E++ +P VR+YVR F A + T G S ID H K+ R + + L
Sbjct: 559 ELAFDPRVRRYVRQQFAQLAKIDVYATEAGSSQIDEAHPAYEFKYSRNLSFEELRKSPKL 618
Query: 347 LIQ--KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
+Q +AE + L+ V + P D K SDGVS A WN QR +++ A+
Sbjct: 619 YLQMLQAEAKGLVNVRVSYP-DFKTKFIDLLLSKLQSDGVSDIASQWNTQRRAVVRIAMK 677
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
L+P + + + + + L E + K++ P++ ++ + + PRVLA
Sbjct: 678 T-LVPMVTRSIKEELRNDCERQLFFELRRMFGRKLNQAPFKPRNYE----KGTVPRVLAL 732
Query: 465 CWGPG---KPETTFVMLDSSGEVVDVLFTGC-LTLRSQNVRDQQSKKNDQERLLKFMMDH 520
G + V +D G V + G T N + K+
Sbjct: 733 SAGQADFRRDAVVGVFVDEEGRVAERAKLGAPQTQEFTNALSEMVKR------------R 780
Query: 521 QPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSR 580
P ++ + LK I E++ + + E + L + + + + L+ NS
Sbjct: 781 TPDLIAFSGQTVQSHRLKSVIEEVV------RTQGLEAEGEPLEVRWVQDEVACLFRNSA 834
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
+ + + VAL RY+Q+PL +L G+EI + + ++ ++ D Y
Sbjct: 835 GALVEFADSPPLERYCVALARYVQSPLLEYLSL---GKEIKAIPMVDFQSLISEDRFYEA 891
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFV 700
++ VD N VG+DIN AI + L +I+GLGPRKA+ L + G + TR D +
Sbjct: 892 VDSTFVDYVNLVGVDINEAIRDAYVARMLPYIAGLGPRKASGLTHKIQSRGYLGTRLDLI 951
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
T GK VF+N FLR+ ++ + +LLD TRIH E Y LA+++A + D
Sbjct: 952 TEKLCGKNVFMNVASFLRLPYDKRSVRHEE-TELLDATRIHIEDYELAKKMAADALELDE 1010
Query: 761 EGDLNDDEDALEMAIEHVRDRPDLLKTYLLD---RHIKEKKRENKRETLYLIRRELIHGF 817
E L + + +A + +++ + L +L+ +++K + KR TL +IRRELI+ +
Sbjct: 1011 EDLLEFESEGGVIA-QLMKEGAEKLNELILEGYAEELEQKLGKKKRYTLEMIRRELINHY 1069
Query: 818 QDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKE 877
++ R + E F M++GETE +L G VV +RR+ + L G+ G + +
Sbjct: 1070 EELREPLHVLTDLEVFTMLTGETEKSLHPGSVVAVQIRRISDRYLAVRLSCGIQGNVT-Q 1128
Query: 878 DYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP--- 934
D D R S H + + + + + L C ++ + + + Q P
Sbjct: 1129 DRITDQRGVHPSALFHHQQTIRAVVMEVSYSNFSAELSCLHRDISDAQKRARQVKRPRDQ 1188
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ E ++ +S QE R+E E K R+I HP F+ + +A K LS GE +IR
Sbjct: 1189 WDFEAEAADKSAQE-VRREVE----QRKTRVIKHPLFKLFSGSDAEKFLSTLPRGELVIR 1243
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVD 1054
PSSRG ++ +T KV DG+Y H D++E GK+++ +GKTL +G + DLDE++
Sbjct: 1244 PSSRGTDHIAVTWKVGDGIYQHIDVVELGKENE-----YALGKTLMVGTSKYSDLDELIA 1298
Query: 1055 RYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTF-ILT 1113
++ + + + K+ S AE ++ + R VY F +S + G F +L
Sbjct: 1299 MHVKSMARKVDELCHSDKYSADSIAETEQSMDSYLRGGSKRAVYRFVLSSKKAGYFHLLV 1358
Query: 1114 YIRSTNPHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+P ++ + + P G++ + D+ +L F+
Sbjct: 1359 KTDQKSPMLDWPVKVIPGGYQLGGEKYPDVMKLCNGFK 1396
>gi|358369067|dbj|GAA85682.1| transcription elongation factor SPT6 [Aspergillus kawachii IFO 4308]
Length = 1415
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 296/1174 (25%), Positives = 533/1174 (45%), Gaps = 114/1174 (9%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
+E+ WI N L L +R +E S+++ L+ L ++PFI +R
Sbjct: 296 EEAAWISN------LMLLKKRIEPELREPFQRSVAK-----VLEFLVTDDWEVPFIFQHR 344
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVL-----WAIHDLDKKWLLLQKRKSA 139
K+ + K V+ +D T+K K+L W I D D K+ L ++++
Sbjct: 345 KDYMIHAAK----VAVDGAGHDGDASQYTIKAEKLLNMTDLWDIFDHDLKFKALVEKRTT 400
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGE 199
+Q + ++ ++N + + + L A T E+ D+ + +HF
Sbjct: 401 IQKTFDNL----------QSLFSVNDTI---VEEMLPTAVTMEELQDI--QDYVHFQYAS 445
Query: 200 V--------GVDEGQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGD 249
G G+ +R K S+K + + + FG +++ E
Sbjct: 446 QLRDMTLMNGEANGETQRRKASSKTFFERVRNGKAYGLVRAFGITADAFAQNALKEGRRQ 505
Query: 250 ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
EDP E P+E+A +F F++S V++ A+ M A EI P +RK VR + N V
Sbjct: 506 YTEDPAEQPDELADSFLDNDFSNSSHVVKAAKTMFAEEIVMSPKMRKVVRQAYYMNGAVD 565
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLP--E 365
T G ID H + K+LR + L +L + KAEEE L++V ++ +
Sbjct: 566 CFRTEKGLRRIDEQHPYYEFKYLRNQQLSDIARRPELYLRMLKAEEEGLVEVKVRFENFD 625
Query: 366 DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGRA 423
+L+ D + SD S+ A +WN R +L AL L+ VKE +
Sbjct: 626 HFRQRLYQDIE----SDNYSELADVWNRTRRDVLDLALGKLERLINRSVKEN---IRQEC 678
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP---GKPETTFVMLDS 480
++ + E +A ++ PY+ K + PRVLA G G+ + ++
Sbjct: 679 ENHVAKECREAFSQRLDQAPYKPKGMILG----TVPRVLALSTGTGIVGREPIHWAYIEE 734
Query: 481 SGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
G V++ G T S RD+ + D + + +P V+ G +S + +
Sbjct: 735 DGRVLE---NGKFTDLSIGDRDRNIADGKDVAAFTELVKRRRPDVI--GVSGMSPETRR- 788
Query: 540 DIYEIIFKMVEE-------HPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQKG 591
+Y+++ ++VE + D E+ D L +V ++ + RLY++S + P
Sbjct: 789 -LYKLLTEVVERQDLRGALYTDDRDDEVSDRLEVVIVNDEVARLYQHSERAKKDHPSFAP 847
Query: 592 NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ 651
VAL +YLQ+PL A+L GR+I+S + P + ++ D +E +VD+ N
Sbjct: 848 LTHYCVALAKYLQSPLKEYASL---GRDIVSIQFKPGQQLVSQDLLLKQLETALVDMVNL 904
Query: 652 VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAH----GLG 706
VG+DIN A+ L ++ GLGPRKAA L + + + G + R + + + +G
Sbjct: 905 VGVDINEAVTDSATANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRAELLGVNAQYPAMG 964
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND 766
KV+ N FL + + D LD+TR+HPE Y +A+++A + D E D+
Sbjct: 965 VKVWNNCASFLYIDFENADPDA----DPLDNTRVHPEDYDIARKMAADALELD-EEDIKA 1019
Query: 767 DED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQD 819
+ D ++ E +DR + L +++ + KR TL IR EL +++
Sbjct: 1020 ETDENGPGAIVRKLFREEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYEE 1079
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
R Q+ S D+ F M++GET DTL+EG VV +++R+ L+ G+ ++ + +
Sbjct: 1080 LRKQFVFLSTDDIFTMLTGETADTLSEGMVVPISIKRITDDHIDGKLDCGIDALVPESEL 1139
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEE 939
+D + D + L K+ + + + + RE ++ + L E
Sbjct: 1140 TDRY-DIPVRALYQIHQTLPAKVLFLNRKNFLCNVSLREEQVSRPVLRTPDRL----QGE 1194
Query: 940 RSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRG 999
RQ Q++ ++++ R+I HP F+ + +A + L ++ G+ +IRPSS+G
Sbjct: 1195 WDDRQEAQDREAQQEKTQSGGRTMRVIKHPMFRPFNSTQAEEFLGSQSRGDVVIRPSSKG 1254
Query: 1000 PSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYID 1058
P +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD+++ ++
Sbjct: 1255 PDHLAVTWKVSDGIFQHIDVLELDKENE-----FSVGRTLKVGGRYTYSDLDDLIFNHVK 1309
Query: 1059 PLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRST 1118
+ + M+ + K++ G+K L P R Y F I +H G F L +
Sbjct: 1310 AMTKKVDEMMLHEKYQDGNKDATYSWLETYTKANPRRSAYAFCIDPKHAGYFFLCFKAGE 1369
Query: 1119 N-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
P H + + + P+G++ ++ + D+ L F+
Sbjct: 1370 KAPLHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1403
>gi|350631725|gb|EHA20096.1| hypothetical protein ASPNIDRAFT_209138 [Aspergillus niger ATCC 1015]
Length = 1415
Score = 303 bits (776), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 296/1176 (25%), Positives = 535/1176 (45%), Gaps = 118/1176 (10%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
+E+ WI N L L +R +E S+++ L+ L ++PFI +R
Sbjct: 296 EEAAWISN------LMLLKKRIEPELREPFQRSVAK-----VLEFLVTDDWEVPFIFQHR 344
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVL-----WAIHDLDKKWLLLQKRKSA 139
K+ + K V+ +D T+K K+L W I D D K+ L ++++
Sbjct: 345 KDYMIHAAK----VAVDGAGHDADASQYTIKAEKLLNMTDLWDIFDHDLKFKALVEKRTT 400
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGE 199
+Q + ++ ++N + + + L A T E+ D+ + +HF
Sbjct: 401 IQKTFDNL----------QSLFSVNDTI---VEEMLPTAVTMEELQDI--QDYIHFQYAS 445
Query: 200 V--------GVDEGQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGD 249
G G+ +R K S+K + + + FG +++ E
Sbjct: 446 QLRDMTLMNGEANGETQRRKASSKTFFERVRNGKAYGLVRAFGITADAFAQNALKEGRRQ 505
Query: 250 ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
EDP E P+E+A +F F++S V++ A+ M A EI P +RK VR + N V
Sbjct: 506 YTEDPAEQPDELADSFIDNDFSNSSHVVKAAKTMFAEEIVMSPKMRKVVRQAYYMNGAVD 565
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLP--E 365
T G ID H + K+LR + L +L + KAEEE L++V ++ +
Sbjct: 566 CFRTEKGLRRIDEQHPYYEFKYLRNQQLSDIARRPELYLRMLKAEEEGLVEVKVRFENFD 625
Query: 366 DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGRA 423
+L+ D + SD S+ A +WN R +L AL L+ VKE +
Sbjct: 626 HFRQRLYQDIE----SDNYSELADVWNRTRRDVLDLALGKLERLINRSVKEN---IRQEC 678
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP---GKPETTFVMLDS 480
++ + E +A ++ PY+ K + PRVLA G G+ + ++
Sbjct: 679 ENHVAKECREAFSQRLDQAPYKPKGMILG----TVPRVLALSTGTGIVGREPIHWAYIEE 734
Query: 481 SGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
G V++ G T S RD+ + D + + +P V+ G +S + +
Sbjct: 735 DGRVLE---NGKFTDLSIGDRDRNIADGKDVAAFTELVKRRRPDVI--GVSGMSPETRR- 788
Query: 540 DIYEIIFKMVEE-------HPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQKG 591
+Y+++ ++VE + D E+ D L +V ++ + RLY++S + P
Sbjct: 789 -LYKLLTEVVERQDLRGALYTDDRDDEVSDRLEVVIVNDEVARLYQHSERAKKDHPSFAP 847
Query: 592 NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ 651
VAL +YLQ+PL A+L GR+I+S + P + ++ D +E +VD+ N
Sbjct: 848 LTHYCVALAKYLQSPLKEYASL---GRDIVSIQFKPGQQLVSQDLLLKQLETALVDMVNL 904
Query: 652 VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAH----GLG 706
VG+DIN A+ L ++ GLGPRKAA L + + + G + R + + + +G
Sbjct: 905 VGVDINEAVTDSATANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRAELLGVNAQYPAMG 964
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND 766
KV+ N FL + + D LD+TR+HPE Y +A+++A + D E D+
Sbjct: 965 VKVWNNCASFLYIDFENADPDA----DPLDNTRVHPEDYDIARKMAADALELD-EEDIKA 1019
Query: 767 DED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQD 819
+ D ++ E +DR + L +++ + KR TL IR EL +++
Sbjct: 1020 ETDENGPGAIVRKLFREEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYEE 1079
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
R Q+ S D+ F M++GET +TL+EG VV +++R+ L+ G+ ++ + +
Sbjct: 1080 LRKQFVFLSTDDIFTMLTGETAETLSEGMVVPISIKRITDDHIDGKLDCGIDALVPESEL 1139
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYY--H 937
+D + D + L K+ + + + + RE ++ + L +
Sbjct: 1140 TDRY-DIPVRALYQIHQTLPAKVLFLNRKNFLCNVSLREEQVSRPVLRTPDRLQGEWDDR 1198
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSS 997
+E R+++QEK + + R+I HP F+ + +A + L ++ G+ +IRPSS
Sbjct: 1199 QEAQDREAQQEKTQSGGQTM------RVIKHPLFRPFNSTQAEEFLGSQSRGDVVIRPSS 1252
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRY 1056
+GP +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD+++ +
Sbjct: 1253 KGPDHLAVTWKVSDGIFQHIDVLELDKENE-----FSVGRTLKVGGRYTYSDLDDLIFNH 1307
Query: 1057 IDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIR 1116
+ + + M+ + K++ G+K L P R Y F I +H G F L +
Sbjct: 1308 VKAMTKKVDEMMLHEKYQDGNKDATYSWLETYTKANPRRSAYAFCIDPKHAGYFFLCFKA 1367
Query: 1117 STN-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
P H + + + P+G++ ++ + D+ L F+
Sbjct: 1368 GEKAPLHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1403
>gi|321248721|ref|XP_003191217.1| transcription initiation protein SPT6 [Cryptococcus gattii WM276]
gi|317457684|gb|ADV19430.1| Transcription initiation protein SPT6, putative [Cryptococcus gattii
WM276]
Length = 1506
Score = 303 bits (776), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 301/1216 (24%), Positives = 530/1216 (43%), Gaps = 138/1216 (11%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+++ +Q L++P++ Y K + SLL++ Q+ V D+ LW ++ L
Sbjct: 349 LNMMFVQHLEVPYLWHY-KRDVFSLLENQGQSSVLFLERDE------------LWQVYVL 395
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
+++ + +R + ++K ++R+ E L + S+EAA E
Sbjct: 396 GQRYRAIHERNEQTRQQWEKI---KARKGDIEDEYFTKGLLGKACVTSIEAAGEGTEWLA 452
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS-LE 245
++ E DE K P+++ ++ + + ++ FG + ++ +
Sbjct: 453 YHYASDIKAIKEEEAFDEISKKLPEKA-EHEDIRRGKIMKLVEAFGIDANKVASSFQDVN 511
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
+ +P + P E+A F A ++S + L A + E+S +P +R+ R FMD
Sbjct: 512 GQPAPVMNPDKMPLELADEFTGAAYSSPEQALSAASFVLIQELSKDPAIRQQARD-FMDA 570
Query: 306 A-VVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA-QWLLIQKAEEEKLLQVTIKL 363
+V+ T G S ID +H + K+L +KP+ F D+ Q++ + KAEEE L+ + +
Sbjct: 571 CGLVTVNATDRGMSVIDQYHLYYNFKFLTDKPVLAFRDSPQFIHMLKAEEEGLISIAFDI 630
Query: 364 PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
PE+ L S+ + A WN+ R + L+P K + + +A
Sbjct: 631 PENMLATFTDALIRCCRSNDYGEIASAWNEVRVEACNTLVKKHLMPMASKWIKEHLRTQA 690
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG--KPETTFVMLDSS 481
+ ++ + L +V+V PY + + P VLA G G + VMLD
Sbjct: 691 EEYIAERCREELELRVNVRPYASSGME----QGETPSVLAITNGKGDIRDAVMAVMLDDE 746
Query: 482 GEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
G V R+Q D + D+ ++ + +P V+V+G ++ LKD
Sbjct: 747 GNV-----------RTQTKFDNLRDEEDKTIFIELLEKRKPKVIVIGGFSVQTARLKDAA 795
Query: 542 YEIIFK-----------MVEEHPRDVGH-----EMDE------LSIVYGDESLPRLYENS 579
I + + + +P G E DE + +++ +++ RLY S
Sbjct: 796 LAAIRQHAIDLLGQNPPVSDAYPDHEGFQYAMAEYDERLKAHLIPLIFVNDATARLYMAS 855
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKY- 638
+ + P N + A+ L RY QNPL C GR I S L P EK
Sbjct: 856 EEAEKEHPNLPLNGRYALGLARYAQNPLN---AYCKLGRHIASVTFMEHHQKLIPQEKLL 912
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
+E+ +V+ +G++IN + +Q A L +I+GLGPRKA ++ + + GA+ R
Sbjct: 913 HHLERGLVNSVCFMGIEINSCVADPYQRAMLPYIAGLGPRKADAVIYGIQKHGALINRMA 972
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSG-----QAASSSQFIDLLDDTRIHPESYGLAQELAK 753
F G +F N GFL + +A ++ + D LD TRIHPE+Y AQ++
Sbjct: 973 FTDLGLFGPTIFENTAGFLTIESDLKDMMLEAENTQEQPDPLDMTRIHPENYEFAQKMC- 1031
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVRDR--PDLLKTYLLDR----------------HIK 795
+DAL++ +E V DR ++++T +LD +++
Sbjct: 1032 --------------QDALDLDVEDVADRHKSEVVQTLMLDDKRGKKLGELNLDDFAFNLQ 1077
Query: 796 EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVR 855
+ NKR TL I ELI D R + P+ E M++GETE T+ G V ATVR
Sbjct: 1078 RQGEGNKRHTLGEIVSELIRYRSDRRPPFYVPTDWEIVTMVTGETERTVGRGLKVTATVR 1137
Query: 856 RVQGQRAICVLESGLAGMLMKEDYSDDWRDSELS---DKLHEGDILTCKIKSIQKNRYQV 912
+ R C LESGL +L + DY D + ++ + + + + R+QV
Sbjct: 1138 KALSARVFCQLESGLDAVL-ERDYVADEDQAPVTSCDEVFKPRQAIKGVVIMPEPARFQV 1196
Query: 913 FLVCRESEMRNNRYQHCQNLDPYYHEERSS--RQSEQEKARKEKELAKKHFKERLIVHPC 970
+ R S++R Q + P+ EE ++ R+ E A K+ + +R++ HP
Sbjct: 1197 RISTRPSDLR----QGVDFVQPFKDEEYNNKDRRDAAEAATAAKKQRRAGKVQRIVNHPN 1252
Query: 971 FQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIK 1030
+ + + +A + L+++ G+ +IRPSS+GP + +T KV + VY H D+ E K ++
Sbjct: 1253 WHVLNSGQAEQFLASQHRGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNE--- 1309
Query: 1031 SLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEK 1089
+G+ L + G+ + DLD+++ ++ + + K++ + E+D L+
Sbjct: 1310 --YSLGRILMVGGQYRYSDLDDLIINHVKATARKFDEIQMHEKYK--PEHELDAFLKNYV 1365
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIG-----LYPKGFKFRKRMFEDIDR 1144
P R +YGF + + PG L ++ I + P +K + +
Sbjct: 1366 QAHPGRSIYGFSVDSDRPGYLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGVTE 1425
Query: 1145 LVAYFQRHIDDP---QGDSAPSIRSVAAMVPM----RSPANGGSTASAGS---GWGGSTN 1194
L F+ + QG + PM R+PA G T + GS G T
Sbjct: 1426 LSNAFKMQYSEKLAEQGHQGKTPGIYLGKTPMHLGGRTPALGSRTPAMGSRTPALGSRTP 1485
Query: 1195 EGGWNRDRSSTPGSRT 1210
G R+ GSRT
Sbjct: 1486 ALG---SRTPALGSRT 1498
>gi|380487096|emb|CCF38265.1| transcription elongation factor SPT6 [Colletotrichum higginsianum]
Length = 1334
Score = 303 bits (775), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 286/1133 (25%), Positives = 515/1133 (45%), Gaps = 106/1133 (9%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE---RTPTLKWHKV 119
I + L+ + +++P++ +RK+ + K +N + D+ D E L
Sbjct: 248 IGKVLEFFVVDDVEVPYVFQHRKDYLIHAKK--TKNPDHRDDPDAPEWIVSADKLLTQDD 305
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I +LD K+ L ++++AL+ + S + + L D I ++ E
Sbjct: 306 LWRILELDIKFRSLIEKRNALEKTLENLKSTSSFK---------DAVLEDMIPQAATMEE 356
Query: 180 TEREVDDVDLKFNLHFPPGE-------VGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKF 231
+ DL+ LHF + + Q KRP +S + ++ + +
Sbjct: 357 LQ------DLQDYLHFQYASELKDMSSINGNGSQMKRPGSKSNLFDRVRRSKAFGFVRAY 410
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
G + ++ E +D + P+++A + F + V+ AR M A E+
Sbjct: 411 GITPDRFAQNTLREGNKVWADDDSQLPDDLADSLTDEEFQTGDTVMYAARQMYAEELFVN 470
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQ 349
P +RK+ R F +S T G ID H F VK+L + + + +L +
Sbjct: 471 PRMRKHFRVNFYQMGEISCRRTEKGLKKIDESHPFYEVKYLINQTIADVARQPDLYLKMM 530
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--L 407
KAEEE L++V + L D K ++ ++SD S+ A WN++R+ +L + +
Sbjct: 531 KAEEEGLIEVKLTLENDDGFK--RQLRQEFISDNYSELADRWNEERQKVLDLVVPRLSKI 588
Query: 408 LPSMVKEA-RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
+ VKE+ R+ EY K ++ PY+ K + PR++
Sbjct: 589 IAKGVKESLRTACQEEVLKTCREEYSK----RLDQAPYKPKGMILG----TVPRIITLSN 640
Query: 467 G---PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
G P + T + ++ G V++ G L RD++++ E ++ + +P
Sbjct: 641 GMADPARDPTCWASVEEDGRVIEQGKLGNLA------RDERAR----EEFVEIVNRRRPD 690
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE-----LSIVYGDESLPRLYEN 578
+ + + L D+ +I + P E+ E L ++ ++ + RLY++
Sbjct: 691 AIGVSGWSADTQKLVRDLESLISEKGLMGPEFDDPELGEYRTEPLEVIVVNDEVARLYKD 750
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKY 638
S + + P + +AL Y+QNPL A L G+++ S P +N L ++
Sbjct: 751 SPRAVAEHPTLSSLTRYCIALAHYMQNPLKEYAAL---GKDVTSLAFHPCQNLLPQEKLL 807
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRK 697
+E MVD+ N G++IN A+ + L +++GLGPRKA S+ +++ GA+ +R
Sbjct: 808 KHLESAMVDMVNLCGVNINEAVGDSYTANLLPYVAGLGPRKATSVIKAINANGGAVSSRD 867
Query: 698 DFVTAHGLGK------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
+ V GK +V+ N FL + +S D LD+TR+HPE Y L +++
Sbjct: 868 ELVGDPDSGKLPVVGPRVWNNCASFLFIDYDATNPTS----DPLDNTRVHPEDYELGRKM 923
Query: 752 AK---EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRET 805
A E+ D++ + + + + D + + +L+ + ++ +R + KR T
Sbjct: 924 AADALELDEEDVKAETDHNGPGAIVRKLFKEDEQEKVNELILEEYAEQLERNYSQRKRAT 983
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV 865
L IR EL +++ R + + F M +GET+DTLA+G ++ VR V+ AI
Sbjct: 984 LETIRAELQAPYEELRRNFAPLGPHDIFTMFTGETKDTLAQGMIIPVNVRVVKDDFAIVK 1043
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
L+ G+ G + D D R L L G + K+ I + L R++E++
Sbjct: 1044 LDCGIEGRIESHDGPDGVRVRGL---LTNGQTVQAKVLEINYKDFLAKLSARDAEVKRP- 1099
Query: 926 YQHCQNLDPYYH-----EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
Y+ P YH +ER +E K+K + +R+I HP F+ EA
Sbjct: 1100 YKR-----PLYHGHGQWDERLEAADREELREKDKSTGR---TQRVIKHPLFKPFNGLEAE 1151
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
+ L + GE IIRPSS+G +L +T KV DGV+ H D++E K+ + +GK L+
Sbjct: 1152 QWLGTQAAGEVIIRPSSKGNDHLAITWKVADGVFQHVDVLELQKETE-----FSVGKLLR 1206
Query: 1041 I-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYG 1099
+ G+ T++DLDE++ +I+ + + M+ ++KF K SK ++++ L P R Y
Sbjct: 1207 VGGKFTYKDLDELIHEHIEAMSRKVDEMMQHKKFEKRSKTDLEKWLTTYMEANPDRSDYA 1266
Query: 1100 FGISHEHPGTFILTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
F I +HPG F L + RS+ + + + P GF+ K+ + D+ L F+
Sbjct: 1267 FCIDPKHPGYFWLCFKASRSSRVNSWPVRVIPGGFELLKQAYPDMRALCNGFK 1319
>gi|342878993|gb|EGU80270.1| hypothetical protein FOXB_09197 [Fusarium oxysporum Fo5176]
Length = 1406
Score = 302 bits (774), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 292/1181 (24%), Positives = 526/1181 (44%), Gaps = 109/1181 (9%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEG--HDLSISR-DDIMRF 66
RK+ E +E+ WI NQL PK+G DL I + +
Sbjct: 282 RKSFKTLQLTAEQFREEARWITNQLW--------------PKKGLAADLQIPFGKAVGKV 327
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+ + ++++P++ +RK+ L K N + D + L LW I +L
Sbjct: 328 LEFFIVDEVEVPYVFQHRKDYLLHTRKTRNPNRDDPDAPEYVISADKLLNQDDLWKILEL 387
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D K+ +++AL+ ++ + LA++ + + + + A T E+ D
Sbjct: 388 DIKFRSFVDKRNALEKTFE-----------NLKGLAIHDTI---VEEMIPEATTMEELQD 433
Query: 187 VDLKFNLHFPP-----GEVGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGL 240
+ + P + + KRP +S + + +G S++QL
Sbjct: 434 LQDYLQFQYGPQLKDLAAMAGNLSLTKRPGSKSNLLERVRQGKAYSFVRAYGISADQLAK 493
Query: 241 QLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+D + P ++A + F++ V+ AR M + E+ P +RK+ R+
Sbjct: 494 NALRHGKKITPDDDAQYPMDLADSLVDDNFDTGDQVINAARQMYSEELFASPRMRKHFRN 553
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQ 358
+ A +S T G ID H + +K+L+ + + + +L + KAEEE L+
Sbjct: 554 SYYQAAEISCRRTEKGLRRIDDSHPYYEIKYLQNQAIADLVHQPELFLKMMKAEEEGLVT 613
Query: 359 VTIKLPE--DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKE 414
+ + +P D +L+ + + S+ S A+ W ++R+ +L A ++ VKE
Sbjct: 614 IKLDMPARYDFRRQLY----QEFESENFSDRAEQWREERKKVLDLAYPKLERIIAKNVKE 669
Query: 415 A-RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PGK 470
R+ EY K ++ PY+ K + PRVL G P +
Sbjct: 670 VIRTFCQDEVLKMCREEYAK----RLDQAPYKPKGMILG----TTPRVLVLSNGMADPAR 721
Query: 471 PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAV 530
+ ++ G V++ G L RD++ ++ +E + +P V+ +
Sbjct: 722 DPICWAWVEEDGRVIEQGKLGNLA------RDERQREEFEE----LVKRRRPDVIGVSGW 771
Query: 531 NLSCTSLKDDIYEIIFKM-----VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+ T L D+ ++ + E P + + L +V ++ + RLY++S + +
Sbjct: 772 SAETTKLVRDLESLVNEKGLMGPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRALAE 831
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
P + VAL RY+QNP+ A L G+++ S P +N L PD+ ++ M
Sbjct: 832 HPSLNPVTRYCVALARYMQNPMKEYAAL---GKDVASISYHPCQNLLPPDKLAKYLDSAM 888
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG 704
VD+ N G+DIN A++ + L ++SGLGPRKA S+ +++ GA+ TR + V
Sbjct: 889 VDMVNLCGVDINEAMNDSYTANLLPYVSGLGPRKATSVIKAINANGGAVGTRDELVGDPD 948
Query: 705 LGK------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EV 755
GK +V+ N FL + +S D LD+TR+HPE Y L +++A E+
Sbjct: 949 SGKLPVVGPRVWNNCASFLFIEYEATNPAS----DPLDNTRVHPEDYELGRKMAADALEL 1004
Query: 756 YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIRRE 812
D++ + +++ + +D D + +L+ + ++ +R + KR TL IR E
Sbjct: 1005 DEEDVKAETDENGPGAIVRKLFKQDEQDKVNELVLEEYAEQLERNYSQRKRATLETIRAE 1064
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
L +++ R + S E F M +GET+ TL EG +V VR V+ AI L+ G+ G
Sbjct: 1065 LQAPYEELRRNFALLSASEIFTMFTGETKQTLCEGMIVPINVRVVKDDFAIVKLDCGIEG 1124
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNL 932
+ + S S + D L G KI I + L R+ +R Y+ NL
Sbjct: 1125 RIEGHEVS---HRSSIKDALTSGQTTQAKILDINYKDFMAKLSMRDETLRIP-YKRPINL 1180
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
+ ++E K+K + +R++ HP F+ +A + L ++ GE I
Sbjct: 1181 GRDGWDYALEAADKEELREKDKTTGR---TQRVVKHPNFKPFNGLQAEEYLGSQPNGEVI 1237
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDE 1051
IRPSS+G +L +T KV DGVY H D++E K+ + +GK L++ G+ T+ DLDE
Sbjct: 1238 IRPSSKGNDHLAVTWKVADGVYQHIDVLEMQKETE-----FSVGKLLRVGGKYTYTDLDE 1292
Query: 1052 VVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFI 1111
++ ++ + ++ ++ + K++ S+ E ++ L P R Y F I +HPG F
Sbjct: 1293 LIVEHVKAMARKVEELMRHDKYQNRSRGETEKWLTTYIDANPNRSAYAFCIDTKHPGYFW 1352
Query: 1112 LTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
L + RS + P+GF+ + + D+ L F+
Sbjct: 1353 LCFKASRSARVIALPVRAIPQGFELKGYQYPDMRALCNGFK 1393
>gi|429855347|gb|ELA30305.1| transcription elongation factor spt6 [Colletotrichum gloeosporioides
Nara gc5]
Length = 1409
Score = 302 bits (773), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 285/1135 (25%), Positives = 521/1135 (45%), Gaps = 111/1135 (9%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT---LKWHKV 119
I + L+ + +++P++ +RK+ + K +N + D+ D E + L
Sbjct: 324 IGKVLEFFVVDDVEVPYVFQHRKDYLIHAKK--TKNPDHRDDPDAPEYIVSADKLLTQDD 381
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I +LD K+ L +++++L+ ++ +ES + D+ L D IS++ E
Sbjct: 382 LWRILELDIKFRSLIEKRNSLEKTFESL--KESASVNDDV-------LTDMISQAATMEE 432
Query: 180 TEREVDDVDLKFNLHFP-------PGEVGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKF 231
+ DL+ LHF + + Q KRP +S + ++ +
Sbjct: 433 LQ------DLQDYLHFQYTAELKDLSSINGNGNQMKRPGSKSNLFDRIRRSKAAGFVRAY 486
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
G + ++ E +DP + P+++A + F + +V+ AR M A E+
Sbjct: 487 GITPDRFAQNTLREGNKVFADDPSQLPDDLADSLTDEDFQTGDSVVNAARQMYAEELFAN 546
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQ 349
P +RK+ R F ++ T G ID H F VK+L + + + +L +
Sbjct: 547 PRMRKHFRINFYQMGEINCRRTEKGLKKIDESHPFYEVKYLINQTIADVARQPELYLKMM 606
Query: 350 KAEEEKLLQVTIKLP-EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
KAEEE L++V + L ED + ++ ++SD S+ A WN++R+ +L D + L
Sbjct: 607 KAEEEGLIEVKLTLENEDGFKR---QLRQEFISDNYSEIADRWNEERQKVL-DIVVPRLS 662
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
+ K + + + +L + ++ PY+ K + PR++ G
Sbjct: 663 KIIAKGVKESLRTACQEEVLKSCREEYAKRLDQAPYKPKGMILG----TVPRIITLSNGM 718
Query: 469 GKP---ETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
G P T++V ++ G V++ G L RD+ ++ + + +P +
Sbjct: 719 GDPARDATSWVSVEEDGRVIEQGKLGNLA------RDEATRAE----FVDIVNRRRPDAI 768
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE-----LSIVYGDESLPRLYENSR 580
+ + L D+ +I + P E+ E L ++ ++ + RLY++S
Sbjct: 769 GVSGFSADTQKLVRDLESLINEKGLMGPEFDDPELGEYRTEPLEVIIVNDEVARLYKDSP 828
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
+ + P + +AL Y+QNPL A L G++I S P +N L ++
Sbjct: 829 RAVAEHPTLSPLTRYCIALAHYMQNPLKEYAAL---GKDIASLAFHPCQNLLPQEKLLKH 885
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDF 699
+E MVD+ N G++IN AI + L +++GLGPRKA S+ +++ G++ +R +
Sbjct: 886 LESAMVDMVNLCGVNINEAIGDSYTANLLPYVAGLGPRKATSVIKAINANGGSVSSRDEL 945
Query: 700 VTAHGLGK------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
V GK +V+ N FL + +S D LD+TR+HPE Y L +++A
Sbjct: 946 VGDPDSGKLPVVGPRVWNNCASFLFIDYDATNPTS----DPLDNTRVHPEDYELGRKMAA 1001
Query: 754 ---EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLY 807
E+ D++ + + + + D + + +L+ + ++ +R + KR TL
Sbjct: 1002 DALELDEEDVKAETDHNGPGAIVRKLFKEDEQEKVNELILEEYAEQLERNYSQRKRATLE 1061
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
I R + +++ R + +E F M +GET+DTLA+G ++ VR V+ AI L+
Sbjct: 1062 TI-RAVQAPYEELRRNFAALGANEIFTMFTGETKDTLAQGMIIPVNVRVVKDDFAIVKLD 1120
Query: 868 SGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQ 927
G+ G + D D R + L G + K+ + + L R++E++
Sbjct: 1121 CGIEGRIESHDGPDGVR---VRGILSTGQTVQAKVLDVNYKDFIAKLSARDAEVKR---- 1173
Query: 928 HCQNLDPY----YH-----EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADE 978
PY YH ++R ++E K+K + +R+I HP F+ E
Sbjct: 1174 ------PYKRQLYHGHGQWDDRLEAADKEELREKDKTTGR---TQRVIKHPMFKPFNGLE 1224
Query: 979 AMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKT 1038
A + L + GE IIRPSS+G +L +T KV DGV+ H D++E KD++ +GK
Sbjct: 1225 AEQWLGTQPAGEVIIRPSSKGNDHLAITWKVADGVFQHVDVLELQKDNE-----FSVGKL 1279
Query: 1039 LKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIV 1097
LK+ G+ T++DLDE++ +I+ + + M+ + KF K SK ++++ L P R
Sbjct: 1280 LKVGGKFTYKDLDELIHEHIEAMSRKVDEMMQHEKFEKRSKPDLEKWLTTYIDANPNRSA 1339
Query: 1098 YGFGISHEHPGTFILTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
Y F I +HPG F L + RS+ + + + P GF+ K+ + D+ L F+
Sbjct: 1340 YAFCIDTKHPGYFWLCFKASRSSRVNSWPVRVIPGGFELLKQAYPDMRALCNGFK 1394
>gi|302912728|ref|XP_003050763.1| transcription elongation factor SPT6 [Nectria haematococca mpVI
77-13-4]
gi|256731701|gb|EEU45050.1| transcription elongation factor SPT6 [Nectria haematococca mpVI
77-13-4]
Length = 1408
Score = 302 bits (773), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 299/1185 (25%), Positives = 526/1185 (44%), Gaps = 117/1185 (9%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---DDIMRF 66
RK E +E+ WI NQL PK+G + + +
Sbjct: 284 RKNFKNLQLTAEQFREEARWITNQLW--------------PKKGLAADLQSPFGKAVGKV 329
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+ + ++++P++ +RK+ L K N + D + L LW I +L
Sbjct: 330 LEFFIVDEVEVPYVFQHRKDYLLHTRKTRNPNRDDPDAPEYVISAEKLLNQDDLWKILEL 389
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D K+ ++++L+ + E+ R D + DSI + + T E +
Sbjct: 390 DIKFRSFVDKRNSLEKTF------ENLRGLD---------INDSIVEEMIPEATTME-EL 433
Query: 187 VDLKFNLHFPPG----EVGVDEGQY---KRP-KRSTKYSSCSKAGLWEVASKFGYSSEQL 238
DL+ LHF G ++ G KRP +S + + +G +++QL
Sbjct: 434 QDLQDYLHFQYGPQLKDLAAMAGNLSLTKRPGSKSNLLERVRQGKAYNFVRAYGVTADQL 493
Query: 239 GLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYV 298
+ +D + P ++A + F++ V+ AR M A E+ P +RK+
Sbjct: 494 AKNALRQGKKVSPDDDAQYPMDLADSLIDDNFSTGDQVMSAARQMYAEELFASPRMRKHF 553
Query: 299 RSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKL 356
R+ + A +S T G ID H + VK+L+ + + + +L + KAEEE L
Sbjct: 554 RNSYYQAAEISCRRTDKGLRRIDETHPYYEVKYLQNQAIADLVHQPELFLKMMKAEEEGL 613
Query: 357 LQVTIKLPE--DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMV 412
+ + + +P D +L+ + + S+ S A+ W ++R+ +L A ++ V
Sbjct: 614 VSIKLDMPARYDFRRQLY----QEFESENFSDRAEQWREERKKVLDLAYPKLEKIIAKNV 669
Query: 413 KEA-RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---P 468
KE R+ EY K ++ PY+ K + PRVL G P
Sbjct: 670 KEVIRTFCQDEVLKMCREEYAK----RLDQAPYKPKGMILG----TTPRVLVLSNGMSDP 721
Query: 469 GKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG 528
+ + ++ G V++ G L RD++ + E ++ + +P V+ +
Sbjct: 722 ARDPVCWAWVEEDGRVIEQGKFGNLA------RDERQR----EDFVEVVNRRRPDVIAVS 771
Query: 529 AVNLSCTSLKDDIYEIIFKM-----VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
+ L D+ ++ + E P + + L +V ++ + RLY++S +
Sbjct: 772 GWSADTNKLVRDLETLVTEKGLMGPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRAL 831
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQ 643
+ P + VAL RY+QNP+ A L GR++ S P +N L P++ ++
Sbjct: 832 AEHPSLNPITRYCVALARYMQNPMKEYAAL---GRDVTSLSYHPCQNLLPPEKLAKYLDS 888
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTA 702
MVD+ N G+DIN AI + L ++SGLGPRKA+S+ +++ GA+ TR + V
Sbjct: 889 AMVDMVNLCGVDINEAITDSYTANLLPYVSGLGPRKASSVIKAINANGGAVNTRDELVGD 948
Query: 703 HGLGK------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK--- 753
GK +V+ N FL + SS D LD+TR+HPE Y L +++A
Sbjct: 949 PDSGKLPVVGPRVWNNCASFLFIEYEATNPSS----DPLDNTRVHPEDYELGRKMAADAL 1004
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIR 810
E+ D++ + +++ + +D D + +L+ + ++ +R + KR TL IR
Sbjct: 1005 ELDEEDVKAETDENGPGAIVRKLFKQDEQDKVNELVLEEYAEQLERNYSQRKRATLETIR 1064
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGL 870
EL +++ R + + E F M +GET+ TL +G +V VR V+ AI L+ G+
Sbjct: 1065 AELQAPYEELRRNFGLLTASEIFTMFTGETKLTLCDGMIVPVNVRIVKDDFAIVKLDCGI 1124
Query: 871 AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQ 930
G + + S + + + L G KI I + L RE +R Y+
Sbjct: 1125 EGRVEAHEAS---HRASIKEVLSVGQTAQAKILDINYKDFMAKLSMREDSLRIP-YKRPI 1180
Query: 931 NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGE 990
N + + E K+K + +R++ HP F+ +A + L ++ GE
Sbjct: 1181 NFGRDGWDYALEAADKDELREKDKTTGR---TQRVVKHPNFKPFNGLQAEEYLGSQPNGE 1237
Query: 991 SIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDL 1049
IIRPSS+G +L +T KV DGVY H D++E KD + +GK L++ G+ T+ DL
Sbjct: 1238 VIIRPSSKGNDHLAVTWKVADGVYQHIDVLEMQKDTE-----FSVGKLLRVGGKYTYSDL 1292
Query: 1050 DEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
DE++ ++ +V ++ M+ + KF+ S+ E + L P + Y F I +HPG
Sbjct: 1293 DELIVEHVKAMVRKVEEMMRHDKFQSRSRGETENWLTTYINANPNQSTYAFCIDTKHPGY 1352
Query: 1110 FILTYIRSTNPHHEYIGL----YPKGFKFRKRMFEDIDRLVAYFQ 1150
F L + N + IGL P+GF+ + + D+ L F+
Sbjct: 1353 FWLCF--KANRAAKVIGLPVRTIPQGFELKGYQYPDMRALCNGFK 1395
>gi|330926751|ref|XP_003301595.1| hypothetical protein PTT_13131 [Pyrenophora teres f. teres 0-1]
gi|311323469|gb|EFQ90268.1| hypothetical protein PTT_13131 [Pyrenophora teres f. teres 0-1]
Length = 1447
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 295/1181 (24%), Positives = 533/1181 (45%), Gaps = 93/1181 (7%)
Query: 17 PTDGES-IVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---DDIMRFLDLLHL 72
P D ++ + +E+TWI N L PK+G S+ + + L+ +++
Sbjct: 296 PEDMQARLTEEATWISNMLW--------------PKKGLPRYFSQPFEKAVRKVLEFINI 341
Query: 73 QKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
+ ++PFI +RK+ + D + + ++ R L LW + DLD K+
Sbjct: 342 EDYEVPFIFNHRKDYLIHAPSDHDDYDDIDNPPPMDARPERLLNQADLWEVFDLDLKFRA 401
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+++ AL+ Y E + +Y E + + +S E +E+ D L +
Sbjct: 402 FAEKRDALRQNY-----ENLKAVYSE----ITDTEIEELSNRAATIEEIQELQDY-LHYK 451
Query: 193 LHFPPGEVGVD-EGQYKRPKRSTKYSSCSKAG-LWEVASKFGYSSEQLGLQLSLEKMGDE 250
EV + G KR + + ++G ++ G + + ++ G
Sbjct: 452 YSQELNEVRQELNGTQKRANNARNFFDKLRSGKALQLVKAIGITPDDFAKKVDGTNTGAH 511
Query: 251 -LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
+EDP +E+A A + +L+ + + ++ +R+Y+R+ F NA +
Sbjct: 512 TIEDPPYKVDELADQLAEAP-ETGATLLRSTKLLFVQDLQMCSRLRRYLRASFYQNAEID 570
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ-----WLLIQKAEEEKLLQVTIKLP 364
T G I + + K+LR F D Q +L + KAE E L+QV I +
Sbjct: 571 CVRTDKGMRTITEDNPYYEFKYLRRV---TFGDLQGRPDLFLKMLKAESEGLMQVKITM- 626
Query: 365 EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGR 422
+ S + +S+GVS + WN R+ +L ALD ++ + VKE + R
Sbjct: 627 -GNYPNFKSRLHKEIVSEGVSDVSDTWNALRKELLDTALDKLQGVIANGVKET---LRAR 682
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK--PETTFVMLDS 480
+ L + +NK+ PY+ K + + P VL G G + +++
Sbjct: 683 CEDELAASARENYYNKLDQAPYKLKSAPLG----SVPNVLCLSNGTGMRGDAIMWAYVEN 738
Query: 481 SGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
G V++ + +R N + D E+L+ + +P V+ + ++ L D
Sbjct: 739 DGRVLE--HGRLIEMRLGNPERNIPEGQDIEKLVDVIQRRRPDVIGVSGFSVETRKLYKD 796
Query: 541 IYEIIFKMVEEHP----RDVGHEMDE-LSIVYGDESLPRLYENSRISSDQLPGQKGNVKR 595
I EII + P D G E +E L ++ ++ + RLY S + + P +
Sbjct: 797 IQEIIIQRGLTGPAYEDEDTGEERNEPLEVIMVNDEVARLYHTSVRAIAEFPKHPALTRY 856
Query: 596 AVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLD 655
+ALGRYLQNPLA A+L G++I+S P + + D+ +E MVD+ N VG+D
Sbjct: 857 CIALGRYLQNPLAEYASL---GKDIVSIPFIPNQTLIPQDKLLDRLETAMVDMVNLVGID 913
Query: 656 INLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAH-------GLGK 707
+ ++ + ++ GLGPRKA L +++ + I +R D + +G
Sbjct: 914 LPETYDDKYLSKLIPYVCGLGPRKADRLIKAIQANSDEILSRFDLLGVSESRDLKAAMGP 973
Query: 708 KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDD 767
KVF N FL + SS D LD TR+HPE Y LA+++ + N D E +
Sbjct: 974 KVFQNCASFLYIPYDATEESS----DYLDYTRVHPEDYDLARKMVADALNMDEEDVKAET 1029
Query: 768 EDALEMAI--EHVRDRP-DLLKTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWR 821
++ A+ + VR+ DL+ L+ + E +R + KR TL IR EL + +++ R
Sbjct: 1030 DEGGPSAVVRKMVREETTDLVNDLALEDYAAEIERNFGQRKRATLETIRAELDNPYEEIR 1089
Query: 822 NQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSD 881
+ S DE F M++GET+D+L EG VV T+RR LE G+ G + + ++ +
Sbjct: 1090 QIFALLSGDEMFTMLTGETKDSLYEGMVVPVTIRRTFPDHIEVKLECGIEGGVSESEFPE 1149
Query: 882 DWRD--SELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEE 939
E I+ +I + + L R+ +R + + + E
Sbjct: 1150 GVGGGGQEPRHVYSTHQIVRARIVYLNRKALTAQLSLRDDLIRQPEKKRFERAAGEWDEA 1209
Query: 940 RSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRG 999
+ ++ +++ A KEKE+A R++ HP F +A + L +KE G+ +IRPSS+G
Sbjct: 1210 QEAQ--DKKAAEKEKEVATGR-PNRVVNHPLFFAFNTVQAEEYLGSKETGDLVIRPSSKG 1266
Query: 1000 PSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDP 1059
+L +T KV + Y H D++E K ++ +GK LKIG+ T+ DLDE++ +++
Sbjct: 1267 FDHLVVTWKVSNNAYQHLDVLEMNKPNQ-----FSLGKQLKIGKHTYSDLDELIVNHVEA 1321
Query: 1060 LVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY-IRST 1118
+ + + +F+ G++ + ++ L P+R +Y F ++PG F + + + +
Sbjct: 1322 MARKVTELTRDERFQPGTREDTEKWLGNYCEANPSRSMYAFCSMPKYPGHFWICFQMSAK 1381
Query: 1119 NPHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQG 1158
P + I + P F+ +K ++ D+ L F+ + G
Sbjct: 1382 GPKGAWGIKVVPNAFELQKHVYPDMIALKNGFKMLVTSAAG 1422
>gi|340520395|gb|EGR50631.1| hypothetical protein TRIREDRAFT_57295 [Trichoderma reesei QM6a]
Length = 1410
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 286/1165 (24%), Positives = 524/1165 (44%), Gaps = 107/1165 (9%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---DDIMRFLDLLHLQKLDIPFIA 81
+E+ WI NQL PK+G + + + L+ + ++++PF+
Sbjct: 301 EEARWITNQLW--------------PKKGLAQELQAPFGKAVGKVLEFFIVDEVEVPFVF 346
Query: 82 MYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQ 141
+RK+ L K + + D D ++ L LW I +LD K+ ++++AL+
Sbjct: 347 QHRKDYLLHSKKIRKSTRDDPDGPDYTIQSDKLLNQDDLWRILELDIKFRSFVEKRNALE 406
Query: 142 SYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPP---- 197
Y +S + DE + + + A T E+ D+ +
Sbjct: 407 KSYDNL---KSMDVKDEM-----------VEEMIPEATTMEEIQDLQDYLQFQYANKLRD 452
Query: 198 -GEVGVDEGQYKRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
+ + Q KRP +S+ + +G +++QL + +D +
Sbjct: 453 LASLSGNTSQTKRPGSKSSLLDRVRNGKAYYFVKAYGITADQLAKNALRQGRKVAPDDHE 512
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
+ P ++A + F++ V+ AR M A E+ P +RKY+R+ F A +S T
Sbjct: 513 QYPMDLADSLTDESFSTGDQVINAARQMYAEELFASPRMRKYLRASFYQAAEISCRRTEK 572
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLPE--DSLNKL 371
G ID H + +K+++ + + + +L + +AEEE L+++ +++P D +L
Sbjct: 573 GLRKIDDTHPYYEIKYIQNQAIADLVHQPEVFLKMMRAEEEGLVEIKVEMPSRYDFRRQL 632
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
+ + + S+ S A+ W ++R +L A L + K + ++ + +L
Sbjct: 633 Y----QEFESENFSDRAEQWREERRKVLDLAYPK-LEKIVAKNIKEVIRTFCQDEVLKMC 687
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE---TTFVMLDSSGEVVDVL 488
+ + K+ PY+ K + PRVL G G P + ++ G V++
Sbjct: 688 RQEFYRKLDQAPYKPKGMILG----TTPRVLVLSNGGGDPTRDPVCWAWVEEEGRVLEQG 743
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII--- 545
G L RD+ ++N ++ + +P V+ + + L D+ ++
Sbjct: 744 KFGNLG------RDETQREN----FVELVRRRRPDVIGVSGWSADTHKLVRDLEGLVSEK 793
Query: 546 --FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYL 603
E P + + L +V ++ + RLY++S + + P + +AL RYL
Sbjct: 794 GLMGAEFEDPETNDYRTELLEVVVVEDEVARLYKDSPRAIAEHPSLNSVTRYCIALARYL 853
Query: 604 QNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
QNP+ A L G+++ S P +N L D+ +E MVD N VG++IN A+
Sbjct: 854 QNPMKEYAAL---GKDVASLSFHPCQNLLPRDKLMKYLESAMVDTVNMVGVNINEAMTDP 910
Query: 664 WQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLGK------KVFVNAVGF 716
+ L +++GLGPRKA S+ +++ G + TR + V GK +V+ N F
Sbjct: 911 YTANLLPYVAGLGPRKATSVIKTINANGGVVNTRDELVGDPDSGKLPVVGPRVWNNCASF 970
Query: 717 LRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNRDIEGDLNDDEDALEM 773
L + SS D LD+TR+HPE Y L +++A E+ D++ + +++ +
Sbjct: 971 LYIEYDATNPSS----DPLDNTRVHPEDYELGRKMAADALELDEEDVKAETDENGPGAIV 1026
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
+D + + +LD + + +R + KR TL I EL +++ R + +
Sbjct: 1027 RKLFKQDEQERVNELVLDEYADQLQRNFSQRKRATLEAISAELQAPYEELRRSFALLTPS 1086
Query: 831 EEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSD 890
+ F M +GET+ TL EG +V VR V+ AI L+ G+ G + + S+ + + D
Sbjct: 1087 DIFTMFTGETKSTLCEGMIVPVNVRMVRDDFAIVKLDCGIEGRIEGHEVSNR---ASVKD 1143
Query: 891 KLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKA 950
L G + KI + + L RE +R Y+ N + ++E
Sbjct: 1144 VLSTGQTVQAKILEMNYKDFMAKLSIREESLRIP-YKAPINFGRDGWDYALEAADKEELR 1202
Query: 951 RKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVY 1010
K+K + +R++ HP F+ + +A + L ++ PGE IIRPSS+G +L +T KV
Sbjct: 1203 EKDKTTGRT---QRVVKHPNFKPFNSIQAEEYLGSQPPGEVIIRPSSKGNDHLAITWKVA 1259
Query: 1011 DGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLS 1069
DGVY H D++E K+ + +GK L+I G+ T+ DLDE++ ++ + ++ M+
Sbjct: 1260 DGVYQHIDVLEMQKETE-----FSVGKLLRIGGKYTYSDLDELIVDHVKAMARKVEEMMR 1314
Query: 1070 YRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGL-- 1127
+ K++ S++E ++ L P R Y F I +HPG F L + S IGL
Sbjct: 1315 HDKYQNRSRSETEKWLITYVDANPNRSAYAFCIDTKHPGYFWLCFKASKTAR--VIGLPV 1372
Query: 1128 --YPKGFKFRKRMFEDIDRLVAYFQ 1150
P+GF+ R + D+ L F+
Sbjct: 1373 RTIPQGFELRGYQYPDMRALCNGFK 1397
>gi|325089589|gb|EGC42899.1| transcription elongation factor spt6 [Ajellomyces capsulatus H88]
Length = 1433
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 303/1193 (25%), Positives = 524/1193 (43%), Gaps = 112/1193 (9%)
Query: 6 CRSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR 65
C+ RK E +E+ WI N L L +R +E SI++
Sbjct: 285 CQIARKPYKHVILTDEEFKEEAIWISN------LMLLKKRIDPDLREPFQRSIAK----- 333
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + ++PFI +RK+ + K + + N D + + L LW I
Sbjct: 334 VLEFMITDDWEVPFIFQHRKDYLIHAAKVPVSPDPSNPDGPEYVVKAEKLLNMIDLWDIF 393
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK-SLEAAETERE 183
+ D K+ L +++ LQ + YD + N + D+I + L A T E
Sbjct: 394 EYDLKFRSLVDKRNTLQ------------KTYDNLQAISNVK--DNIFELMLPLAVTMEE 439
Query: 184 VDDVDLKFNLHFP-----------PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
+ DV +P GE G + + K R T + + + FG
Sbjct: 440 LQDVQDYLYFQYPGQLKDIAMVNGSGENGSSKQRRKATTR-TFSERVRNSRAYGLVRAFG 498
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
+++ E EDP E P+ MA NF F + L+ A+ M A E++ P
Sbjct: 499 ITADAFAQNALKEGKRQYTEDPAEQPDVMADNFVDENFTNGGHALRAAKAMFAEELTMSP 558
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--K 350
+RK +R F N V+ T G ID H + K+LR + L L ++ K
Sbjct: 559 KMRKVMRQAFYMNGVIECFRTEKGLKKIDEQHPYYEFKYLRNQQLSDIARRPELFLRMLK 618
Query: 351 AEEEKLLQVTIKLP--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
AEEE L++V ++ E+ L+S + SD S+ A WN +R ++ AL L
Sbjct: 619 AEEEGLVEVKVRFQNFENFKKSLYSQIE----SDNFSELADAWNRERREVVDMALGK-LD 673
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG- 467
M + + + ++ ++ E +A ++ PY+ K + PRVLA G
Sbjct: 674 RIMSRGVKENIRTECENHVVKECREAFSLRLDQAPYKPKGMILG----TIPRVLALSNGN 729
Query: 468 --PGKPETTFVMLDSSGEV------VDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
GK + ++ G V VD+ + S + D ++ +
Sbjct: 730 GVVGKDPIYWAWIEEDGRVLENGKFVDLSLGDSGRMVSDGI--------DVAAFVELVDR 781
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEII-------FKMVEEHPRDVGHEMDELSIVYGDESL 572
+P V+ + + L + +++ E+ +V D L +V ++ +
Sbjct: 782 RKPDVIGVAGFSPETRKLYKQLVDLVSSKDLRSATYTNEYDEEVS---DHLEVVIVNDEV 838
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFL 632
RLY+ S + + PG VAL +YLQNP+ A+L GR+I+S + P + +
Sbjct: 839 ARLYQTSERAKMEHPGFATLTHYCVALAKYLQNPMKEYASL---GRDIVSIQFKPGQQLV 895
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAG 691
D+ +E +VD+ N G+DIN A+ L ++ GLGPRKAA L + + + G
Sbjct: 896 PEDKILKQLETALVDMVNLCGVDINEAVTDIATANLLPYVCGLGPRKAAQLLKIINMNGG 955
Query: 692 AIFTRKDFVTAH----GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
+ R + + + +G KV+ N FL + S+ D LD+TR+HPE Y +
Sbjct: 956 IVNNRMELLGVNAQYPAMGVKVWNNCASFLYI----DYDSTDPDADYLDNTRVHPEDYDI 1011
Query: 748 AQELAKEVYNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE 800
+++A + D E D+ + D ++ E +DR + L +++ +
Sbjct: 1012 GRKMAADALELD-EEDIKAETDENGQGAIIRKLIKEDAQDRVNDLILEEYAEQLEKNLNQ 1070
Query: 801 NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQ 860
KR TL IR EL +++ R Q+ S D F M++GET ++LAEG VV +++RV
Sbjct: 1071 RKRATLETIRAELQQPYEELRKQFAFLSTDAIFIMLTGETTESLAEGMVVPISIKRVSDD 1130
Query: 861 RAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
L+ G+ + + + +D + D + + KI + + Q + RES+
Sbjct: 1131 HIDGKLDCGIDAIAGEVEITDRY-DIPVRSLFSPHQTVQGKILYLNRKLLQANVSLRESQ 1189
Query: 921 MRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
+ + +L + E + +++E R++ E + + R+I HP F+ A +A
Sbjct: 1190 ISKPYRRQFDHLRDEWDERQED--ADREALREKTETSGRTM--RVIKHPLFRAFNAAQAE 1245
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
+ L+ + G+ +IRPSS G +L T KV DGVY H DI+E K+++ +GK LK
Sbjct: 1246 EFLAPQSRGDVVIRPSSNGIDHLAATWKVSDGVYQHLDILELDKENE-----FSVGKILK 1300
Query: 1041 I-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYG 1099
+ G ++ DLDE + +I + + M+++ KF++GSKA+ + L P R Y
Sbjct: 1301 VGGRYSYSDLDEFIVNHIKTMAKKVDDMMNHEKFQEGSKADAEGWLTTYTIANPRRSAYA 1360
Query: 1100 FGISHEHPGTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
F I +HPG F L + N + + P+G++ ++ + D+ L F+
Sbjct: 1361 FCIDRKHPGYFHLCFKAGENAQLNSWAVKVIPQGYELQRNPYPDMMALCNGFK 1413
>gi|121704692|ref|XP_001270609.1| transcription elongation factor SPT6, putative [Aspergillus clavatus
NRRL 1]
gi|119398755|gb|EAW09183.1| transcription elongation factor SPT6, putative [Aspergillus clavatus
NRRL 1]
Length = 1421
Score = 301 bits (770), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 296/1176 (25%), Positives = 533/1176 (45%), Gaps = 110/1176 (9%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R +E S+++ L+ L ++PFI
Sbjct: 298 EQFREEAAWISN------LMLLKKRIEPDLREPFQRSVAK-----VLEFLVTDDWEVPFI 346
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + K ++ + D + + L LW I D D K+ L ++++
Sbjct: 347 FQHRKDYMIHATKVPIDGAPADGDTSQYTVKAEKLLNMTDLWDIFDHDLKFRALVEKRNT 406
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS-LEAAETEREVDDVDLKFNLHFPP- 197
+Q + YD + N + DS+ + L AA T E+ DV + +
Sbjct: 407 IQ------------KTYDNMQSLFN--VNDSVVEEMLAAAVTMEELQDVQDYIHFQYSSQ 452
Query: 198 --------GEVGVDEGQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
GE G+ +R K + K + + + FG S++ E
Sbjct: 453 LRDMTLMNGEAN---GETQRRKATGKSFFERVRNGKAYGLVRAFGISADAFAQNALKEGR 509
Query: 248 GDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
EDP + PEEMA + F++S VL+ A+ M A EI P +RK +R + N
Sbjct: 510 RQYTEDPADRPEEMADGHIDSDFSNSSHVLKAAKAMFAEEIVMSPKMRKVIRQAYYMNGT 569
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLP- 364
V T G ID H + K+LR + L + +L + KAEEE L++V ++
Sbjct: 570 VDCFRTEKGLKRIDEQHPYYEFKYLRNQQLSDIARQPELYLRMLKAEEEGLVEVKVRFEN 629
Query: 365 -EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSG 421
+ +L+ D + SD S++A WN R +L AL L+ VKE +
Sbjct: 630 FDHFRQRLYPDIE----SDNYSETADAWNRTRREVLDMALGKLERLINRSVKEN---IRQ 682
Query: 422 RAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PGKPETTFVML 478
++ + E +A ++ PY+ K + PRVLA G G+ + +
Sbjct: 683 ECENHVAKECREAFAQRLDQAPYKPKGMVLG----TVPRVLAMSTGNGIVGREPIHWAYI 738
Query: 479 DSSGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
+ G V++ G S RD+ + D + L++ + +P V+ G ++ +
Sbjct: 739 EEDGRVLE---NGKFVDLSVGDRDRGIADGKDVDALIELLERRRPDVI--GVSGMTPETR 793
Query: 538 KDDIYEIIFKMVEE-------HPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQ 589
K +Y+++ ++ E + + E+ D L +V ++ + RLY++S + PG
Sbjct: 794 K--LYKLLTELAERKDLRGATYTDERDEEISDRLEVVIVNDEVARLYQHSDRAKKDHPGF 851
Query: 590 KGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
VAL +YLQ+PL A+L GR+I+S +L + + + +E +VD+
Sbjct: 852 APLTHYCVALAKYLQSPLKEYASL---GRDIVSIQLKRGQQLVAEELLLKHLETALVDMV 908
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG---- 704
N VG+DIN A+ L ++ GLGPRKAA L + + + G + R + + +
Sbjct: 909 NLVGVDINEAVTDTATANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVNAQYPA 968
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDL 764
+G KV+ N F+ + + D LD+TR+HPE Y +A+++A + D E D+
Sbjct: 969 MGVKVWNNCASFMFIDFENADPDA----DPLDNTRVHPEDYDIARKMAADALELD-EEDI 1023
Query: 765 NDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGF 817
+ D ++ + +DR + L +++ + KR TL IR EL +
Sbjct: 1024 KAETDENGPGAIVRKLFRDEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPY 1083
Query: 818 QDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKE 877
++ R Q+ S D+ F M++GET +TLAEG VV +++R+ L+ G+ ++ +
Sbjct: 1084 EELRKQFALLSTDDVFTMLTGETSETLAEGMVVPISIKRISDDHIDGKLDCGIDALVAES 1143
Query: 878 DYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYH 937
+ +D + D + L K+ + K + + RE ++ + +
Sbjct: 1144 ELTDRY-DIPVRALYSMHQTLPAKVLFLNKKSFLCNVSLREEQVS----RPTPRARDHMR 1198
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSS 997
E RQ +++K +++ R+I HP F+ + +A + L ++ G+ +IRPSS
Sbjct: 1199 GEWDDRQEQKDKEMMQEKTQSGGRVMRVIKHPLFRPFNSTQAEEFLGSQSRGDVVIRPSS 1258
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRY 1056
+GP +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD+++ +
Sbjct: 1259 KGPDHLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRYTYSDLDDLIFNH 1313
Query: 1057 IDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIR 1116
+ + + M+ + K+++GSK L P R Y F I +H G F L +
Sbjct: 1314 VKAMAKKVDEMMLHEKYQEGSKDATYSWLNTYTKANPRRSAYAFCIDPKHAGYFSLCFKA 1373
Query: 1117 STNP--HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
N H + + P+G++ ++ + D+ L F+
Sbjct: 1374 GENAQLHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1409
>gi|134107908|ref|XP_777336.1| hypothetical protein CNBB1380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819506|sp|P0CR73.1|SPT6_CRYNB RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Chromatin elongation factor SPT6
gi|50260026|gb|EAL22689.1| hypothetical protein CNBB1380 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1506
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 304/1216 (25%), Positives = 525/1216 (43%), Gaps = 138/1216 (11%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+++ +Q L++P++ Y K + SLL++ Q+ V D+ LW ++ L
Sbjct: 349 LNMMFVQHLEVPYLWHY-KRDVFSLLENQGQSSVLFLERDE------------LWQVYVL 395
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
+++ + +R + + K ++R+ E L + S+EAA E
Sbjct: 396 GQRYRAIHERNEQTRQQWGKI---KARKGDIEDEYFTKGLLGKACVASIEAAGEGDEWLA 452
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS-LE 245
++ E DE K P+R+ + + + ++ FG + ++ +
Sbjct: 453 YHYASDIKAIKEEEAFDEVSKKLPERAER-EDIRRGRIMKLVEAFGIDANKVASSFQDVH 511
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
+ +P + P E+A F A ++S + L A + E+S +P +R+ R FMD
Sbjct: 512 GQPAPVMNPDKMPLELADEFTGAAYSSPEQALSAASFVLVQELSKDPAIRQQARD-FMDT 570
Query: 306 A-VVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA-QWLLIQKAEEEKLLQVTIKL 363
+V+ T G S ID +H + K+L KP+ F D+ Q++ + KAEEE L+ + +
Sbjct: 571 CGLVTVNATDRGMSVIDQYHLYYNFKFLTNKPVPDFRDSPQFVHMLKAEEEGLINIAFDI 630
Query: 364 PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
ED L S+ + A WN+ R + + L+P K + + +A
Sbjct: 631 REDMLASFTDALIRCCRSNDYGEIASAWNEVRMEVCNTLVKKHLMPMASKWIKEHLRTQA 690
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG--KPETTFVMLDSS 481
+ ++ + L +V+V PY + + P VLA G G + VMLD
Sbjct: 691 EEYIAERCREELELRVNVRPYASSGME----QGETPSVLAITNGKGDIRDAVMAVMLDDE 746
Query: 482 GEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
G V R+Q D + D+ ++ + +P VVV+G + LKD
Sbjct: 747 GNV-----------RTQTKFDNLRDEEDKTMFIELLEKRKPKVVVIGGFSAQTARLKDAA 795
Query: 542 YEIIFKMVEE-----------HPRDVGH-----EMDE------LSIVYGDESLPRLYENS 579
I + E +P G E DE + +++ +++ RLY +S
Sbjct: 796 LVAIRQHAIELLGQNPPVSDAYPDHEGFQYAMAEYDEKLKAHLIPLIFVNDATARLYMSS 855
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
+ + P N + A+ L RY QNPL C G+ I S L P EK
Sbjct: 856 EEAEKEHPNLPLNGRYALGLARYAQNPLN---AYCKLGKHIASVTFMEHHQKLIPQEKLL 912
Query: 640 M-IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
+E+ +V+ +G++IN + +Q A L +I+GLGPRKA ++ + + GA+ R
Sbjct: 913 YHLERGLVNSVCFMGIEINSCVADPYQRAMLPYIAGLGPRKADAVIYGIQKHGALINRMA 972
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSG-----QAASSSQFIDLLDDTRIHPESYGLAQELAK 753
F G +F N GFL + +A + + D LD TRIHPE+Y AQ++
Sbjct: 973 FTDLGLFGPTIFENTAGFLTIESDLKDMMLEAENPQEQPDPLDMTRIHPENYEFAQKMC- 1031
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVRDR--PDLLKTYLLDR----------------HIK 795
+DAL++ +E V DR ++++T +LD +++
Sbjct: 1032 --------------QDALDLDVEDVADRHKSEVVQTLMLDDKRGKKLGELNLDDFAFNLQ 1077
Query: 796 EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVR 855
+ NKR TL I ELI D R + P+ E M++GETE T+ G V ATVR
Sbjct: 1078 RQGEGNKRHTLGEIVSELIRYRSDRRPAFYVPTDWEIVTMVTGETERTVGRGLKVTATVR 1137
Query: 856 RVQGQRAICVLESGLAGMLMKEDYSDDWRDSELS---DKLHEGDILTCKIKSIQKNRYQV 912
+ R C LESGL +L + DY D + ++ + + + + R+QV
Sbjct: 1138 KAISARVFCQLESGLDAVL-ERDYVADEDQAPVTSCDEVFKPRQAIKGVVIMPEPARFQV 1196
Query: 913 FLVCRESEMRNNRYQHCQNLDPYYHEERSS--RQSEQEKARKEKELAKKHFKERLIVHPC 970
+ R S++R Q + P+ EE +S R+ E A K+ + +R++ HP
Sbjct: 1197 RISTRPSDLR----QGVDFVQPFKDEEYNSKDRRDAAEAATAAKKQRRAGKVQRIVNHPN 1252
Query: 971 FQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIK 1030
+ + + +A + L+++ G+ +IRPSS+GP + +T KV + VY H D+ E K ++
Sbjct: 1253 WHVLNSGQAEQFLASQHRGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNE--- 1309
Query: 1031 SLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEK 1089
+G+ L + G+ + DLD+++ ++ + + K++ + E+D L+
Sbjct: 1310 --YSLGRILMVSGQYRYSDLDDLIINHVKATARKFDEIQMHEKYK--PEHELDAFLKNYV 1365
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPK-----GFKFRKRMFEDIDR 1144
P R +YGF + + PG L ++ I +P +K + +
Sbjct: 1366 QAHPGRSIYGFSVDSDRPGYLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGVTE 1425
Query: 1145 LVAYFQRHIDDP---QGDSAPSIRSVAAMVPM----RSPANGGSTASAGS---GWGGSTN 1194
L F+ + QG + PM R+PA G T + GS G T
Sbjct: 1426 LSNAFKMQYSEKLAEQGHQGKTPGIYLGKTPMHLGGRTPALGSRTPAMGSRTPALGSRTP 1485
Query: 1195 EGGWNRDRSSTPGSRT 1210
G R+ GSRT
Sbjct: 1486 ALG---SRTPALGSRT 1498
>gi|58263048|ref|XP_568934.1| hypothetical protein CNB04370 [Cryptococcus neoformans var.
neoformans JEC21]
gi|338819507|sp|P0CR72.1|SPT6_CRYNJ RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Chromatin elongation factor SPT6
gi|57223584|gb|AAW41627.1| hypothetical protein CNB04370 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1506
Score = 300 bits (768), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 304/1216 (25%), Positives = 525/1216 (43%), Gaps = 138/1216 (11%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+++ +Q L++P++ Y K + SLL++ Q+ V D+ LW ++ L
Sbjct: 349 LNMMFVQHLEVPYLWHY-KRDVFSLLENQGQSSVLFLERDE------------LWQVYVL 395
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
+++ + +R + + K ++R+ E L + S+EAA E
Sbjct: 396 GQRYRAIHERNEQTRQQWGKI---KARKGDIEDEYFTKGLLGKACVASIEAAGEGDEWLA 452
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS-LE 245
++ E DE K P+R+ + + + ++ FG + ++ +
Sbjct: 453 YHYASDIKAIKEEEAFDEVSKKLPERAER-EDIRRGRIMKLVEAFGIDANKVASSFQDVH 511
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
+ +P + P E+A F A ++S + L A + E+S +P +R+ R FMD
Sbjct: 512 GQPAPVMNPDKMPLELADEFTGAAYSSPEQALSAASFVLVQELSKDPAIRQQARD-FMDT 570
Query: 306 A-VVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA-QWLLIQKAEEEKLLQVTIKL 363
+V+ T G S ID +H + K+L KP+ F D+ Q++ + KAEEE L+ + +
Sbjct: 571 CGLVTVNATDRGMSVIDQYHLYYNFKFLTNKPVLDFRDSPQFVHMLKAEEEGLINIAFDI 630
Query: 364 PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
ED L S+ + A WN+ R + + L+P K + + +A
Sbjct: 631 REDMLASFTDALIRCCRSNDYGEIASAWNEVRMEVCNTLVKKHLMPMASKWIKEHLRTQA 690
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG--KPETTFVMLDSS 481
+ ++ + L +V+V PY + + P VLA G G + VMLD
Sbjct: 691 EEYIAERCREELELRVNVRPYASSGME----QGETPSVLAITNGKGDIRDAVMAVMLDDE 746
Query: 482 GEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
G V R+Q D + D+ ++ + +P VVV+G + LKD
Sbjct: 747 GNV-----------RTQTKFDNLRDEEDKTMFIELLEKRKPKVVVIGGFSAQTARLKDAA 795
Query: 542 YEIIFKMVEE-----------HPRDVGH-----EMDE------LSIVYGDESLPRLYENS 579
I + E +P G E DE + +++ +++ RLY +S
Sbjct: 796 LVAIRQHAIELLGQNPPVSDAYPDHEGFQYAMAEYDEKLKAHLIPLIFVNDATARLYMSS 855
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
+ + P N + A+ L RY QNPL C G+ I S L P EK
Sbjct: 856 EEAEKEHPNLPLNGRYALGLARYAQNPLN---AYCKLGKHIASVTFMEHHQKLIPQEKLL 912
Query: 640 M-IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
+E+ +V+ +G++IN + +Q A L +I+GLGPRKA ++ + + GA+ R
Sbjct: 913 YHLERGLVNSVCFMGIEINSCVADPYQRAMLPYIAGLGPRKADAVIYGIQKHGALINRMA 972
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSG-----QAASSSQFIDLLDDTRIHPESYGLAQELAK 753
F G +F N GFL + +A + + D LD TRIHPE+Y AQ++
Sbjct: 973 FTDLGLFGPTIFENTAGFLTIESDLKDMMLEAENPQEQPDPLDMTRIHPENYEFAQKMC- 1031
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVRDR--PDLLKTYLLDR----------------HIK 795
+DAL++ +E V DR ++++T +LD +++
Sbjct: 1032 --------------QDALDLDVEDVADRHKSEVVQTLMLDDKRGKKLGELNLDDFAFNLQ 1077
Query: 796 EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVR 855
+ NKR TL I ELI D R + P+ E M++GETE T+ G V ATVR
Sbjct: 1078 RQGEGNKRHTLGEIVSELIRYRSDRRPAFYVPTDWEIVTMVTGETERTVGRGLKVTATVR 1137
Query: 856 RVQGQRAICVLESGLAGMLMKEDYSDDWRDSELS---DKLHEGDILTCKIKSIQKNRYQV 912
+ R C LESGL +L + DY D + ++ + + + + R+QV
Sbjct: 1138 KAISARVFCQLESGLDAVL-ERDYVADEDQAPVTSCDEVFKPRQAIKGVVIMPEPARFQV 1196
Query: 913 FLVCRESEMRNNRYQHCQNLDPYYHEERSS--RQSEQEKARKEKELAKKHFKERLIVHPC 970
+ R S++R Q + P+ EE +S R+ E A K+ + +R++ HP
Sbjct: 1197 RISTRPSDLR----QGVDFVQPFKDEEYNSKDRRDAAEAATAAKKQRRAGKVQRIVNHPN 1252
Query: 971 FQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIK 1030
+ + + +A + L+++ G+ +IRPSS+GP + +T KV + VY H D+ E K ++
Sbjct: 1253 WHVLNSGQAEQFLASQHRGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNE--- 1309
Query: 1031 SLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEK 1089
+G+ L + G+ + DLD+++ ++ + + K++ + E+D L+
Sbjct: 1310 --YSLGRILMVSGQYRYSDLDDLIINHVKATARKFDEIQMHEKYK--PEHELDAFLKNYV 1365
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIG-----LYPKGFKFRKRMFEDIDR 1144
P R +YGF + + PG L ++ I + P +K + +
Sbjct: 1366 QAHPGRSIYGFSVDSDRPGYLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGVTE 1425
Query: 1145 LVAYFQRHIDDP---QGDSAPSIRSVAAMVPM----RSPANGGSTASAGS---GWGGSTN 1194
L F+ + QG + PM R+PA G T + GS G T
Sbjct: 1426 LSNAFKMQYSEKLAEQGHQGKTPGIYLGKTPMHLGGRTPALGSRTPAMGSRTPALGSRTP 1485
Query: 1195 EGGWNRDRSSTPGSRT 1210
G R+ GSRT
Sbjct: 1486 ALG---SRTPALGSRT 1498
>gi|159128029|gb|EDP53144.1| transcription elongation factor SPT6, putative [Aspergillus fumigatus
A1163]
Length = 1420
Score = 300 bits (767), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 300/1180 (25%), Positives = 529/1180 (44%), Gaps = 118/1180 (10%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R +E S+++ L+ L ++PFI
Sbjct: 298 EQFREEAAWIAN------LMLLKKRIEPELREPFQRSVAK-----VLEFLVTDDWEVPFI 346
Query: 81 AMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVL-----WAIHDLDKKWLLLQK 135
+RK+ + K + + + T+K K+L W I D D K+ L +
Sbjct: 347 FQHRKDYMIHATKVPVAGAPADGDTSQY----TIKAEKLLNMTDLWDIFDHDLKFRALVE 402
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS-LEAAETEREVDDVDLKFNLH 194
+++ +Q + YD + N + DS+ + L A T E+ DV +
Sbjct: 403 KRNTIQ------------KTYDNLQSLFN--VNDSVVQDMLSTAVTMEELQDVQDYVHFQ 448
Query: 195 FPP---------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE 245
+ GE D + K RS + + + FG +++ E
Sbjct: 449 YASQLRDINLMNGEANGDTHRRKATGRSF-FERVRNGKAYGLVRAFGITADAFAQNALKE 507
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
EDP E PEEMA +F F+++ VL+ A+ + A EI P +RK +R + N
Sbjct: 508 GRRQYTEDPAERPEEMADSFIDNDFSNASHVLKAAKALFAEEIVMSPKMRKVIRQAYYMN 567
Query: 306 AVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKL 363
V T G ID H + K+LR + L + +L + KAEEE L++V ++
Sbjct: 568 GAVDCFRTEKGLRRIDEQHPYYEFKYLRNQQLSDIARQPELYLRMLKAEEEGLVEVKVRF 627
Query: 364 P--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLM 419
+ +L+ D + SD S+ A WN R +L AL L+ VKE +
Sbjct: 628 ENFDHFRQRLYPDIE----SDNYSEIADAWNRTRREVLDMALGKLERLINRSVKEN---I 680
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFV 476
++ + E +A ++ PY+ K + PRVLA G G + +
Sbjct: 681 RQECENHVAKECREAFSQRLDQAPYKPKGMVLG----TVPRVLAMSTGTGIVGRDPIHWA 736
Query: 477 MLDSSGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCT 535
++ G V++ G S RD+ D E L++ + +P V+ G +S
Sbjct: 737 YVEEDGRVLE---NGKFVDLSIGDRDRSIPDGKDVEALIELLERRRPDVI--GVSGMSPE 791
Query: 536 SLKDDIYEIIFKMVEEHPRDVGHEMDE--------LSIVYGDESLPRLYENSRISSDQLP 587
+ K +Y+++ ++VE+ DE L +V ++ + RLY++S + P
Sbjct: 792 TRK--LYKLLTELVEKKDLRGATYTDERDEEISDPLEVVIVNDEVARLYQHSERAKKDHP 849
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
VAL +YLQ+PL A+L GR+I+S + + + + +E +VD
Sbjct: 850 SFGPLTHYCVALAKYLQSPLKEYASL---GRDIVSIQFKRGQQLVAQELLLKQLETALVD 906
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG-- 704
+ N VG+DIN A+ L ++ GLGPRKAA L + + + G + R + + +
Sbjct: 907 MVNLVGVDINEAVTDPATANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVNAQY 966
Query: 705 --LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEG 762
+G KV+ N FL + + D LD+TR+HPE Y +A+++A + D E
Sbjct: 967 PAMGVKVWNNCASFLFIDFENADPDA----DPLDNTRVHPEDYDIARKMAADALELD-EE 1021
Query: 763 DLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIH 815
D+ + D ++ + +DR + L +++ + KR TL IR EL
Sbjct: 1022 DIKAETDENGPGAIVRKLFRDEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQ 1081
Query: 816 GFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLM 875
+++ R Q+ S D+ F M++GET DTLAEG VV +++R+ L+ G+ ++
Sbjct: 1082 PYEELRKQFALLSTDDVFTMLTGETSDTLAEGMVVPISIKRITDDHIDGKLDCGVDVLVP 1141
Query: 876 KEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPY 935
+ + +D + D + L K+ + K + + RE ++ + ++
Sbjct: 1142 ESELTDRY-DIPVRALYSLHQTLPAKVLFLNKKNFLCNVSLREEQVSRPTPRPRDHMRGE 1200
Query: 936 Y--HEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESII 993
+ +E R+ QEK + + R+I HP F+ + +A + L ++ G+ +I
Sbjct: 1201 WDDRQEAKDREMLQEKTQSGGRVM------RVIKHPLFRPFNSTQAEEFLGSQSRGDVVI 1254
Query: 994 RPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEV 1052
RPSS+GP +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD++
Sbjct: 1255 RPSSKGPDHLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRYTYSDLDDL 1309
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFIL 1112
+ ++ + + M+ + K+++GSK L P R Y F I +HPG F L
Sbjct: 1310 IFNHVKAMAKKVDEMMLHEKYQEGSKDATYSWLNTYTKANPRRSAYAFCIDPKHPGYFQL 1369
Query: 1113 TYIRSTNP--HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ N H + + P+G++ ++ + D+ L F+
Sbjct: 1370 CFKAGENAQLHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1409
>gi|71000667|ref|XP_755015.1| transcription elongation factor SPT6 [Aspergillus fumigatus Af293]
gi|74673863|sp|Q4WWH6.1|SPT6_ASPFU RecName: Full=Transcription elongation factor spt6; AltName:
Full=Chromatin elongation factor spt6
gi|66852652|gb|EAL92977.1| transcription elongation factor SPT6, putative [Aspergillus fumigatus
Af293]
Length = 1420
Score = 300 bits (767), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 300/1180 (25%), Positives = 529/1180 (44%), Gaps = 118/1180 (10%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R +E S+++ L+ L ++PFI
Sbjct: 298 EQFREEAAWIAN------LMLLKKRIEPELREPFQRSVAK-----VLEFLVTDDWEVPFI 346
Query: 81 AMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVL-----WAIHDLDKKWLLLQK 135
+RK+ + K + + + T+K K+L W I D D K+ L +
Sbjct: 347 FQHRKDYMIHATKVPVAGAPADGDTSQY----TIKAEKLLNMTDLWDIFDHDLKFRALVE 402
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS-LEAAETEREVDDVDLKFNLH 194
+++ +Q + YD + N + DS+ + L A T E+ DV +
Sbjct: 403 KRNTIQ------------KTYDNLQSLFN--VNDSVVQDMLSTAVTMEELQDVQDYVHFQ 448
Query: 195 FPP---------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE 245
+ GE D + K RS + + + FG +++ E
Sbjct: 449 YASQLRDINLMNGEANGDTHRRKATGRSF-FERVRNGKAYGLVRAFGITADAFAQNALKE 507
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
EDP E PEEMA +F F+++ VL+ A+ + A EI P +RK +R + N
Sbjct: 508 GRRQYTEDPAERPEEMADSFIDNDFSNASHVLKAAKALFAEEIVMSPKMRKVIRQAYYMN 567
Query: 306 AVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKL 363
V T G ID H + K+LR + L + +L + KAEEE L++V ++
Sbjct: 568 GAVDCFRTEKGLRRIDEQHPYYEFKYLRNQQLSDIARQPELYLRMLKAEEEGLVEVKVRF 627
Query: 364 P--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLM 419
+ +L+ D + SD S+ A WN R +L AL L+ VKE +
Sbjct: 628 ENFDHFRQRLYPDIE----SDNYSEIADAWNRTRREVLDMALGKLERLINRSVKEN---I 680
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFV 476
++ + E +A ++ PY+ K + PRVLA G G + +
Sbjct: 681 RQECENHVAKECREAFSQRLDQAPYKPKGMVLG----TVPRVLAMSTGTGIVGRDPIHWA 736
Query: 477 MLDSSGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCT 535
++ G V++ G S RD+ D E L++ + +P V+ G +S
Sbjct: 737 YVEEDGRVLE---NGKFVDLSIGDRDRSIPDGKDVEALIELLERRRPDVI--GVSGMSPE 791
Query: 536 SLKDDIYEIIFKMVEEHPRDVGHEMDE--------LSIVYGDESLPRLYENSRISSDQLP 587
+ K +Y+++ ++VE+ DE L +V ++ + RLY++S + P
Sbjct: 792 TRK--LYKLLTELVEKKDLRGATYTDERDEEISDPLEVVIVNDEVARLYQHSERAKKDHP 849
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
VAL +YLQ+PL A+L GR+I+S + + + + +E +VD
Sbjct: 850 SFGPLTHYCVALAKYLQSPLKEYASL---GRDIVSIQFKRGQQLVAQELLLKQLETALVD 906
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG-- 704
+ N VG+DIN A+ L ++ GLGPRKAA L + + + G + R + + +
Sbjct: 907 MVNLVGVDINEAVTDPATANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVNAQY 966
Query: 705 --LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEG 762
+G KV+ N FL + + D LD+TR+HPE Y +A+++A + D E
Sbjct: 967 PAMGVKVWNNCASFLFIDFENADPDA----DPLDNTRVHPEDYDIARKMAADALELD-EE 1021
Query: 763 DLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIH 815
D+ + D ++ + +DR + L +++ + KR TL IR EL
Sbjct: 1022 DIKAETDENGPGAIVRKLFRDEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQ 1081
Query: 816 GFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLM 875
+++ R Q+ S D+ F M++GET DTLAEG VV +++R+ L+ G+ ++
Sbjct: 1082 PYEELRKQFALLSTDDVFTMLTGETSDTLAEGMVVPISIKRITDDHIDGKLDCGVDVLVP 1141
Query: 876 KEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPY 935
+ + +D + D + L K+ + K + + RE ++ + ++
Sbjct: 1142 ESELTDRY-DIPVRALYSLHQTLPAKVLFLNKKNFLCNVSLREEQVSRPTPRPRDHMRGE 1200
Query: 936 Y--HEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESII 993
+ +E R+ QEK + + R+I HP F+ + +A + L ++ G+ +I
Sbjct: 1201 WDDRQEAKDREMLQEKTQSGGRVM------RVIKHPLFRPFNSTQAEEFLGSQSRGDVVI 1254
Query: 994 RPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEV 1052
RPSS+GP +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD++
Sbjct: 1255 RPSSKGPDHLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRYTYSDLDDL 1309
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFIL 1112
+ ++ + + M+ + K+++GSK L P R Y F I +HPG F L
Sbjct: 1310 IFNHVKAMAKKVDEMMLHEKYQEGSKDATYSWLNTYTKANPRRSAYAFCIDPKHPGYFQL 1369
Query: 1113 TYIRSTNP--HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ N H + + P+G++ ++ + D+ L F+
Sbjct: 1370 CFKAGENAQLHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1409
>gi|225559586|gb|EEH07868.1| transcription elongation factor spt6 [Ajellomyces capsulatus G186AR]
Length = 1427
Score = 299 bits (765), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 303/1195 (25%), Positives = 523/1195 (43%), Gaps = 116/1195 (9%)
Query: 6 CRSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR 65
C+ RK E +E+ WI N L L +R +E SI++
Sbjct: 279 CQIARKPYKHVILTDEEFKEEAIWISN------LMLLKKRIDPDLREPFQRSIAK----- 327
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + ++PFI +RK+ + K + + N D + + L LW I
Sbjct: 328 VLEFMITDDWEVPFIFQHRKDYLIHAAKVPVSPDPSNPDGPEYVVKAEKLLNMIDLWDIF 387
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK-SLEAAETERE 183
+ D K+ L +++ LQ + YD + N + D+I + L A T E
Sbjct: 388 EYDLKFRSLVDKRNTLQ------------KTYDNLQAISNVK--DNIFELMLPLAVTMEE 433
Query: 184 VDDVDLKFNLHFP-----------PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
+ DV +P GE G + + K R T + + + FG
Sbjct: 434 LQDVQDYLYFQYPGQLKDIAMVNGSGENGSSKQRRKATTR-TFSERVRNSRAYGLVRAFG 492
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
+++ E EDP E P+ MA N F + L+ A+ M A E++ P
Sbjct: 493 ITADAFAQNALKEGKRQYTEDPTEQPDVMADNLVDENFTNGGHALKAAKAMFAEELTMSP 552
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--K 350
+RK +R F N V+ T G ID H + K+LR + L L ++ K
Sbjct: 553 KMRKVMRQAFYMNGVIECFRTEKGLKKIDEQHPYYEFKYLRNQQLSDIARRPELFLRMLK 612
Query: 351 AEEEKLLQVTIKLP--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF-- 406
AEEE L++V ++ E+ L+S + SD S+ A WN +R ++ AL
Sbjct: 613 AEEEGLVEVKVRFQNFENFKKNLYSQIE----SDNFSELADAWNRERREVVDMALGKLDR 668
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
++ VKE + ++ + E +A ++ PY+ K + PRVLA
Sbjct: 669 IMSRGVKEN---IRTECENHVAKECREAFSLRLDQAPYKPKGMILG----TIPRVLALSN 721
Query: 467 G---PGKPETTFVMLDSSGEV------VDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFM 517
G GK + ++ G V VD+ + S + D ++ +
Sbjct: 722 GNGVVGKDPIYWAWIEEDGRVLENGKFVDLSLGDSGRMVSDGI--------DVAAFVELV 773
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEII-------FKMVEEHPRDVGHEMDELSIVYGDE 570
+P V+ + + L + +++ E+ +V D L +V ++
Sbjct: 774 DRRKPDVIGVAGFSPETRKLYKQLVDLVSSKDLRSATYTNEYDEEVS---DHLEVVIVND 830
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLEN 630
+ RLY+ S + + PG VAL +YLQNP+ A+L GR+I+S + P +
Sbjct: 831 EVARLYQTSERAKMEHPGFATLTHYCVALAKYLQNPMKEYASL---GRDIVSIQFKPGQQ 887
Query: 631 FLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VR 689
+ D+ +E +VD+ N G+DIN A+ L ++ GLGPRKAA L + + +
Sbjct: 888 LVPEDKILKQLETALVDMVNLCGVDINEAVTDIATANLLTYVCGLGPRKAAQLLKIINMN 947
Query: 690 AGAIFTRKDFVTAH----GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
G + R + + + +G KV+ N FL + S+ D LD+TR+HPE Y
Sbjct: 948 GGIVNNRMELLGVNAQYPAMGVKVWNNCASFLYI----DYDSTDPDADYLDNTRVHPEDY 1003
Query: 746 GLAQELAKEVYNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKK 798
+ +++A + D E D+ + D ++ E +DR + L +++
Sbjct: 1004 DIGRKMAADALELD-EEDIKAETDENGQGAIIRKLIKEDAQDRVNDLILEEYAEQLEKNL 1062
Query: 799 RENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
+ KR TL IR EL +++ R Q+ S D F M++GET ++LAEG VV +++RV
Sbjct: 1063 NQRKRATLETIRAELQQPYEELRKQFAFLSTDAIFTMLTGETTESLAEGMVVPISIKRVS 1122
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
L+ G+ + + + +D + D + + KI + + Q + RE
Sbjct: 1123 DDHIDGKLDCGIDAIAGEVEITDRY-DIPVRSLFSPHQTVQGKILYLNRKLLQANVSLRE 1181
Query: 919 SEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADE 978
S++ + +L + E + +++E R++ E + + R+I HP F+ A +
Sbjct: 1182 SQISKPYRRQFDHLRDEWDERQED--ADREALREKTETSGRTM--RVIKHPLFRAFNAAQ 1237
Query: 979 AMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKT 1038
A + L+ + G+ +IRPSS G +L T KV DGVY H DI+E K+++ +GK
Sbjct: 1238 AEEFLAPQSRGDVVIRPSSNGIDHLAATWKVSDGVYQHLDILELDKENE-----FSVGKI 1292
Query: 1039 LKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIV 1097
LK+ G ++ DLDE + +I + + M+++ KF++GSKA+ + L P R
Sbjct: 1293 LKVGGRYSYSDLDEFIVNHIKTMAKKVDDMMNHEKFQEGSKADAEGWLTTYTIANPRRSA 1352
Query: 1098 YGFGISHEHPGTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
Y F I +HPG F L + N + + P+G++ ++ + D+ L F+
Sbjct: 1353 YAFCIDRKHPGYFHLCFKAGENAQLNSWAVKVIPQGYELQRNPYPDMMALCNGFK 1407
>gi|254573234|ref|XP_002493726.1| Transcription elongation factor [Komagataella pastoris GS115]
gi|238033525|emb|CAY71547.1| Transcription elongation factor [Komagataella pastoris GS115]
gi|328354449|emb|CCA40846.1| Transcription elongation factor SPT6 [Komagataella pastoris CBS 7435]
Length = 1500
Score = 298 bits (763), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 311/1266 (24%), Positives = 550/1266 (43%), Gaps = 158/1266 (12%)
Query: 7 RSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRF 66
++ RK++ +E WI QL H + +
Sbjct: 311 QAYRKSIKNYKLSDVDYSNERDWIVEQLKLEKRDFLQHLTQAHSSVAHLEEKFEASVKKI 370
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNE--VNNDNNDDFERTPTLKWHKVLWAIH 124
+D + ++ ++PFI +R++ L D N V N DD LW I
Sbjct: 371 VDFIAIESFEVPFIWNHRRDYALHTYNDDSNNTIIVKLLNEDD------------LWRIV 418
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREV 184
LD + + +K+AL S YK+ + Y+E F S A T E+
Sbjct: 419 QLDLDYHSIHDKKAALSSIYKQLDLDVVDPTYEE--------FFGS-------ARTLSEL 463
Query: 185 DDVD--LKFN-------------LHFPPGEVGVDEGQ-----YKRPKRSTKYSSCS---- 220
D+D L FN L G DE Q + K KYS +
Sbjct: 464 QDIDDYLTFNYSSQVKNLTAVAELSIEGNGSGEDEEQTTKSSFAEVKMKRKYSKYAIYDR 523
Query: 221 --KAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA-----MFNSS 273
+ ++ V S Q+ L+ K ++EDP E+P +M ++ F SS
Sbjct: 524 IRQDAIYPVVQSIANIS-QMRENLAQSKRLHQVEDPIESPMDMIADIMSTEKDKTTFISS 582
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR 333
+ Q + + ++S EP +RK +R+ F V++ T G I+ + K+ +
Sbjct: 583 EKAYQAVKQFFSEQLSYEPFIRKTIRTAFQSFGVINIELTERGKLQIEPESPYFDFKYAK 642
Query: 334 EKPLRKFEDAQ--WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYL----SDGVSKS 387
+P+ +L + +AE + L+ + ++LP + S +H+ SDG S+
Sbjct: 643 NRPISALTATPDLYLRMIQAENDGLVNIKVELP------MLSTVVDHFYNILKSDGTSEI 696
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
++ WN R K +LD L+P + + + + L + + K+ PYQ
Sbjct: 697 SEKWNALRNDAWKQSLDK-LIPLVQLNVKESIRRDCERVLYFQVKNSFTKKIDQAPYQPP 755
Query: 448 DNDITPDEEAAPRVLACCWGPGKPETTF--VMLDSSGEVVDVLFTGCLTLRSQNVRDQQS 505
T + PRVL +G G V +D SG+V +SQ D+
Sbjct: 756 ----TYAKGTIPRVLTLSFGEGNRGDAVLGVFMDDSGDV-----------KSQIKFDEDF 800
Query: 506 KKND-QERLLKFMMDHQ--PHVVVLGAVNLSCTSLKDDIYEIIF--KMVEEHPRDVGHEM 560
+ D + L +++ + P ++ + N+ L D + E++ ++ E+ + G++
Sbjct: 801 QSRDFSDSLTRYIKSNNINPDIIGISGFNIHTKKLFDKVNELVNEERLTIEYDNEYGYDR 860
Query: 561 DE--------LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
+E + ++Y ++ RLY++S SS + P + K + L +Y+Q+PL
Sbjct: 861 EEDGRSDKHLIRVIYVNDETARLYQHSSKSSAEYPNRPQLAKYCIGLAKYIQSPLLEYLA 920
Query: 613 LCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFI 672
L + S + +N L ++ ++ +VD+ N VG+DIN A+ + L ++
Sbjct: 921 L---DESMYSLHIHKHQNLLPREKLIDAVQTSIVDIVNLVGVDINEAVRAPYHALALPYV 977
Query: 673 SGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ- 730
GLGPRKAA L +S+ R G+ + R +T K VF+N F+ + + Q
Sbjct: 978 CGLGPRKAAGLIQSIQRIGSNLVNRAHLITEQLTSKTVFLNMASFVYIVFDPDVERNPQG 1037
Query: 731 FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHV-------RDRPD 783
+DLLD TRIHPE Y LA+++A + + + D + E A+ AI + +D D
Sbjct: 1038 EMDLLDSTRIHPEDYSLARKMAADALDIEDIDDDD--ESAMRNAIYEMVFPRSPPKDEDD 1095
Query: 784 L---LKTYLLDRHIKEKKREN---KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMIS 837
L L +LD + E +R++ KR TL +I+ EL +++ R + ++ E F +++
Sbjct: 1096 LTFKLDELILDDYATELERKHQLKKRSTLQIIKEELQSRYREIRRDFHILNEAEIFQLLT 1155
Query: 838 GETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY--SDDWRDSELSDKLHEG 895
ET D+ +G V+ VR+V+ +S +AG + ++D +D RD + G
Sbjct: 1156 RETVDSFRKGMVIPVYVRKVESSYMSVSTQSLIAGNIQRQDILEPNDRRDPR--EVYSVG 1213
Query: 896 DILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKE 955
+ I + ++ L N N +P + + S + QE+ K++E
Sbjct: 1214 QTVRACILDVDYYNFKCQLSLLRQFTENQVAGLNVNRNPKFWDIESENRDRQEEIDKQRE 1273
Query: 956 LAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYA 1015
+++ R+I HP F N+ + EA L+A+ G+ +IRPSS+G +++T++ KV +Y
Sbjct: 1274 ESRE---SRVIKHPFFHNMKSKEAEDYLAARPVGDVVIRPSSKGSNHITISWKVAPQLYQ 1330
Query: 1016 HKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK 1075
H D++E KD + IG+ L +G+ + DLDE++ Y++ + + ++ M+S+ KF
Sbjct: 1331 HIDVLEENKDDAN-----AIGRVLLVGKYRYHDLDELLVEYVNNVANKVELMVSHDKFMS 1385
Query: 1076 GSKAEVDELL-RIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEY----IGLYPK 1130
S V E L R KA R Y F + + PG F L + NP E + P
Sbjct: 1386 DSLDYVKEWLERYSKAN-GNRSHYIFTFNRKAPGWFFLLF--KLNPTSEIKIWNVKALPD 1442
Query: 1131 GFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGG--STASAGSG 1188
G+ ++ D + L F+ ++ S + RS GG + + AG+
Sbjct: 1443 GYLLANNVYPDTNSLCNGFK------------TLMSSRRQIKQRSNRAGGEYNNSHAGAY 1490
Query: 1189 WGGSTN 1194
G +N
Sbjct: 1491 DNGYSN 1496
>gi|189193073|ref|XP_001932875.1| transcription elongation factor spt6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978439|gb|EDU45065.1| transcription elongation factor spt6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1416
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 295/1165 (25%), Positives = 524/1165 (44%), Gaps = 93/1165 (7%)
Query: 17 PTDGES-IVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---DDIMRFLDLLHL 72
P D ++ + +E+TWI N L PK+G S+ + + L+ +++
Sbjct: 285 PEDMQARLTEEATWISNMLW--------------PKKGLPRYFSQPFEKAVRKVLEFINI 330
Query: 73 QKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
+ ++PFI +RK+ + D + + ++ R L LW + DLD K+
Sbjct: 331 EDYEVPFIFNHRKDYLIHAPSDHDDYDDIDNPPPMDARPERLLNQADLWEVFDLDLKFRA 390
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+++ AL+ Y E + +Y E + + +S E +E+ D L +
Sbjct: 391 FAEKRDALRQNY-----ENLKAVYSE----ITDTEIEELSNRAATIEEIQELQDY-LHYK 440
Query: 193 LHFPPGEVGVD-EGQYKRPKRSTKYSSCSKAG-LWEVASKFGYSSEQLGLQLSLEKMGDE 250
EV + G KR + + ++G ++ G + + ++ G
Sbjct: 441 YSQELNEVRQELNGTQKRANNARNFFDKLRSGKALQLVKAIGITPDDFAKKVDGTNTGAH 500
Query: 251 -LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
+EDP EE+A A + +L+ R + ++ +R+Y+R+ F NA +
Sbjct: 501 TIEDPPYKVEELADQLAEAP-ETGATLLRSTRLLFVQDLQMCSRLRRYLRASFYQNAEID 559
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ-----WLLIQKAEEEKLLQVTIKLP 364
T G I + + K+LR F D Q +L + KAE E L+QV I +
Sbjct: 560 CLRTDKGMRTITEDNPYYEFKYLRRV---TFGDLQGRPDLFLKMLKAESEGLMQVRITM- 615
Query: 365 EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGR 422
+ S + +S+GVS + WN R+ +L ALD ++ + VKE + R
Sbjct: 616 -GNYPNFKSRLHKEIVSEGVSDVSDTWNALRKELLDTALDKLQGVIANGVKET---LRAR 671
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK--PETTFVMLDS 480
+ L + +NK+ PY+ K T + P VL G G + +++
Sbjct: 672 CEDELAASARENYYNKLDQAPYKLK----TAPLGSVPNVLCLSNGSGMRGDAIMWAYVEN 727
Query: 481 SGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
G V++ + +R N + D E+L+ + +P V+ + ++ L D
Sbjct: 728 DGRVLE--HGRLIDMRLGNPERNIPEGQDVEKLVDVIQRRRPDVIGVSGFSVETRKLYKD 785
Query: 541 IYEIIFKMVEEHP----RDVGHEMDE-LSIVYGDESLPRLYENSRISSDQLPGQKGNVKR 595
I EII + P D G E +E L I+ ++ + RLY S + + P +
Sbjct: 786 IQEIINQRGLTGPAYEDEDTGEERNEPLEIILVNDEVARLYHTSARAIAEFPKHPALTRY 845
Query: 596 AVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLD 655
+ALGRYLQNPLA A+L G++I+S P + + D+ +E MVD+ N VG+D
Sbjct: 846 CIALGRYLQNPLAEYASL---GKDIVSIPFIPNQTLIPQDKLLDRLETAMVDMVNLVGID 902
Query: 656 INLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAH-------GLGK 707
+ ++ + ++ GLGPRKA L +++ + I +R D + +G
Sbjct: 903 LPETYDDKYLSKLIPYVCGLGPRKADRLIKAIQANSDEILSRFDLLGVSESRDLKAAMGP 962
Query: 708 KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDD 767
KVF N FL + SS D LD TR+HPE Y LA+++ + N D E +
Sbjct: 963 KVFQNCASFLYIPYDATEESS----DYLDYTRVHPEDYDLARKMVADALNMDEEDVKAET 1018
Query: 768 EDALEMAI--EHVRDRP-DLLKTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWR 821
++ A+ + VR+ DL+ L+ + E +R + KR TL IR EL + +++ R
Sbjct: 1019 DEGGPSAVVRKMVREETTDLVNDLALEDYAAEIERNFGQRKRATLETIRAELDNPYEEIR 1078
Query: 822 NQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSD 881
+ S DE F M++GET+D+L EG VV T+RR LE G+ + + ++ +
Sbjct: 1079 QMFAMLSGDELFTMLTGETKDSLYEGMVVPVTIRRTFPDHIEVKLECGIEAGVSESEFPE 1138
Query: 882 DWRD--SELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEE 939
E I+ +I + + L R +R + + + E
Sbjct: 1139 GVGGGGQEPRHVFSTHQIVRARILYLNRKALTAQLSLRGDLIRQPEKKRFERAAGEWDEA 1198
Query: 940 RSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRG 999
+ ++ +++ A KEKE+A R++ HP F +A + L KE G+ +IRPSS+G
Sbjct: 1199 QEAQ--DKKAAEKEKEVATGR-PNRVVNHPLFFAFNTVQAEEYLGGKETGDLVIRPSSKG 1255
Query: 1000 PSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDP 1059
+L +T KV + Y H D++E K ++ +GK LKIG+ T+ DLDE++ +++
Sbjct: 1256 FDHLVVTWKVSNNAYQHLDVLEMNKPNQ-----FSLGKQLKIGKHTYSDLDELIVNHVEA 1310
Query: 1060 LVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY-IRST 1118
+ + + +F+ G++ + ++ L P R +Y F ++PG F + + + +
Sbjct: 1311 MARKVTEITRDDRFQPGTREDAEKWLGNYCQANPLRSMYAFCSMPKYPGHFWICFQMSAK 1370
Query: 1119 NPHHEY-IGLYPKGFKFRKRMFEDI 1142
P + I + P F+ +K ++ D+
Sbjct: 1371 GPKGAWPIKVVPNAFELQKHVYPDM 1395
>gi|327357357|gb|EGE86214.1| transcription elongation factor spt6 [Ajellomyces dermatitidis ATCC
18188]
Length = 1465
Score = 297 bits (760), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 299/1185 (25%), Positives = 526/1185 (44%), Gaps = 96/1185 (8%)
Query: 6 CRSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR 65
C+ RK E +E+ WI N L L +R +E SI++
Sbjct: 284 CQIARKPYKHVILTDEQFKEEAIWISN------LMLLKKRLDPDLREPFQRSIAK----- 332
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + ++PFI +RK+ + K + + N D + + L LW I
Sbjct: 333 VLEFMITDDWEVPFIFQHRKDYLIHAAKVPVSPDPSNPDGPEYVVKAEKLLNMIDLWDIF 392
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETER 182
+ D K+ L ++++LQ + YD + N + +F+S+ L A T
Sbjct: 393 EYDLKFRSLVDKRNSLQ------------KTYDNLQAVSNVKDDIFESM---LPLAVTME 437
Query: 183 EVDDVDLKFNLHFPP-----------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKF 231
E+ DV +P GE G+ + + K R T + + + F
Sbjct: 438 ELQDVQDYLYFQYPSQLRDIAVVNGGGEDGLSKQRRKATTR-TFSERVRNSRAYGLVRAF 496
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
G +++ E EDP E P+ MA N F + L+ ++ M A EI+
Sbjct: 497 GITADAFAQNALKEGKRQYTEDPAEQPDVMADNLLDDNFTNGGHALKASKSMFAEEITMN 556
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ-- 349
P +RK +R F N V+ T G ID H + K+LR + L L ++
Sbjct: 557 PKMRKVMRQAFYMNGVIECFRTEKGLKKIDEQHPYYEFKYLRNQQLSDIARRPELFLRML 616
Query: 350 KAEEEKLLQVTIKLPE-DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
KAEEE L+ V ++ D+ K L+S + SD S+ A WN +R ++ AL L
Sbjct: 617 KAEEEGLVDVKVRFQNFDNFKKNLYSQIE----SDNFSELADAWNRERREVVDMALGK-L 671
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
M + + + ++ + E +A ++ PY+ K + PRVLA G
Sbjct: 672 ERIMSRGVKENIRTECENHVAKECREAFSLRLDQAPYKPKGMILG----TIPRVLALSNG 727
Query: 468 ---PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHV 524
GK + ++ G V++ L+L K D ++ + +P V
Sbjct: 728 NGVVGKDPIYWAWVEEDGRVLENGKFVDLSLGDSGRMIADGK--DVAAFVELVDRRKPDV 785
Query: 525 VVLGAVNLSCTSLKDDIYEIIFKMV---EEHPRDVGHEM-DELSIVYGDESLPRLYENSR 580
+ + + L + +++ + D E+ D L +V ++ + RLY+ S
Sbjct: 786 IGVSGFSPETRKLSKQLSDLVSSKDLRGATYTNDYDEEVSDHLEVVMVNDEVARLYQTSE 845
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
+ + PG VAL +YLQNP+ A+L GR+I+S + P + + D+
Sbjct: 846 RAKMEHPGFATLTHYCVALAKYLQNPMKEYASL---GRDIVSIQFKPGQQLVPQDKILKQ 902
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDF 699
+E +VD+ N G+DIN A+ L ++ GLGPRKAA L + + + G + R +
Sbjct: 903 LETALVDMVNLCGVDINEAVTDMATANLLPYVCGLGPRKAAHLLKIINMNGGIVNNRMEL 962
Query: 700 VTAH----GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ + +G KV+ N FL + S+ D LD+TR+HPE Y + +++A +
Sbjct: 963 LGVNAQYPAMGVKVWNNCASFLFI----DYDSTDPDADYLDNTRVHPEDYDIGRKMAADA 1018
Query: 756 YNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYL 808
D E D+ + D ++ E +DR + L +++ + KR TL
Sbjct: 1019 LELD-EEDIKAETDENGQGAIIRKLIKEDAQDRVNDLILEEYAEQLEKNLSQRKRATLET 1077
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLES 868
IR EL +++ R Q+ D F M++GET ++LAEG VV +++RV L+
Sbjct: 1078 IRAELQQPYEELRKQFAFLGTDTIFTMLTGETPESLAEGMVVPISIKRVTDDHIDGKLDC 1137
Query: 869 GLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQH 928
G+ + + + +D + D + + KI + + Q + RES++ +
Sbjct: 1138 GIDAIAGEVEITDRY-DIPVRSLFAPHQTVQGKILYLNRKLLQANVSLRESQVNKPYRRQ 1196
Query: 929 CQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEP 988
+L + E + +++E R++ E + + R+I HP F+ + +A + L+ +
Sbjct: 1197 FDHLRSEWDERQED--ADREALREKTETSGRAM--RVIKHPLFRPFNSVQAEEFLATQSR 1252
Query: 989 GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFE 1047
G+ +IRPSS G ++ T KV DG+Y H DI+E K+++ +GK LK+ G ++
Sbjct: 1253 GDVVIRPSSNGIDHIAATWKVSDGIYQHLDILELDKENE-----FSVGKILKVGGRYSYS 1307
Query: 1048 DLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
DLDE++ +I + + M+++ KF++G+KA+ + L P R VY F I +HP
Sbjct: 1308 DLDELIVNHIKAMAKKVDDMMNHEKFQEGTKADTEGWLTTYTKANPRRSVYAFCIDRKHP 1367
Query: 1108 GTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
G F L + N + + P+G++ ++ + D+ L F+
Sbjct: 1368 GYFHLCFKAGENAQLNSWAVKVIPQGYELQRNPYPDMMALCNGFK 1412
>gi|261188475|ref|XP_002620652.1| transcription elongation factor spt6 [Ajellomyces dermatitidis
SLH14081]
gi|239593136|gb|EEQ75717.1| transcription elongation factor spt6 [Ajellomyces dermatitidis
SLH14081]
Length = 1434
Score = 296 bits (759), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 301/1185 (25%), Positives = 527/1185 (44%), Gaps = 97/1185 (8%)
Query: 6 CRSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR 65
C+ RK E +E+ WI N L L +R +E SI++
Sbjct: 284 CQIARKPYKHVILTDEQFKEEAIWISN------LMLLKKRLDPDLREPFQRSIAK----- 332
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + ++PFI +RK+ + K + + N D + + L LW I
Sbjct: 333 VLEFMITDDWEVPFIFQHRKDYLIHAAKVPVSPDPSNPDGPEYVVKAEKLLNMIDLWDIF 392
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETER 182
+ D K+ L ++++LQ + YD + N + +F+S+ L A T
Sbjct: 393 EYDLKFRSLVDKRNSLQ------------KTYDNLQAVSNVKDDIFESM---LPLAVTME 437
Query: 183 EVDDVDLKFNLHFPP-----------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKF 231
E+ DV +P GE G+ + + K R T + + + F
Sbjct: 438 ELQDVQDYLYFQYPSQLRDIAVVNGGGEDGLSKQRRKATTR-TFSERVRNSRAYGLVRAF 496
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
G +++ E EDP E P+ MA N F + L+ ++ M A EI+
Sbjct: 497 GITADAFAQNALKEGKRQYTEDPAEQPDVMADNLLDDNFTNGGHALKASKSMFAEEITMN 556
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ-- 349
P +RK +R F N V+ T G ID H + K+LR + L L ++
Sbjct: 557 PKMRKVMRQAFYMNGVIECFRTEKGLKKIDEQHPYYEFKYLRNQQLSDIARRPELFLRML 616
Query: 350 KAEEEKLLQVTIKLPE-DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
KAEEE L+ V ++ D+ K L+S + SD S+ A WN +R ++ AL L
Sbjct: 617 KAEEEGLVDVKVRFQNFDNFKKNLYSQIE----SDNFSELADAWNRERREVVDMALGK-L 671
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
M + + + ++ + E +A ++ PY+ K + PRVLA G
Sbjct: 672 ERIMSRGVKENIRTECENHVAKECREAFSLRLDQAPYKPKGMILG----TIPRVLALSNG 727
Query: 468 ---PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHV 524
GK + ++ G V++ L+L K D ++ + +P V
Sbjct: 728 NGVVGKDPIYWAWVEEDGRVLENGKFVDLSLGDSGRMIADGK--DVAAFVELVDRRKPDV 785
Query: 525 VVLGAVNLSCTSLKDDIYEIIFKMV---EEHPRDVGHEM-DELSIVYGDESLPRLYENSR 580
+ + + L + +++ + D E+ D L +V ++ + RLY+ S
Sbjct: 786 IGVSGFSPETRKLSKQLSDLVSSKDLRGATYTNDYDEEVSDHLEVVMVNDEVARLYQTSE 845
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
+ + PG VAL +YLQNP+ A+L GR+I+S + P + + D+
Sbjct: 846 RAKMEHPGFATLTHYCVALAKYLQNPMKEYASL---GRDIVSIQFKPGQQLVPQDKILKQ 902
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDF 699
+E +VD+ N G+DIN A+ L ++ GLGPRKAA L + + + G + R +
Sbjct: 903 LETALVDMVNLCGVDINEAVTDMATANLLPYVCGLGPRKAAHLLKIINMNGGIVNNRMEL 962
Query: 700 VTAH----GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ + +G KV+ N FL + S+ D LD+TR+HPE Y + +++A +
Sbjct: 963 LGVNAQYPAMGVKVWNNCASFLFI----DYDSTDPDADYLDNTRVHPEDYDIGRKMAADA 1018
Query: 756 YNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYL 808
D E D+ + D ++ E +DR + L +++ + KR TL
Sbjct: 1019 LELD-EEDIKAETDENGQGAIIRKLIKEDAQDRVNDLILEEYAEQLEKNLSQRKRATLET 1077
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLES 868
IR EL +++ R Q+ D F M++GET ++LAEG VV +++RV L+
Sbjct: 1078 IRAELQQPYEELRKQFAFLGTDTIFTMLTGETPESLAEGMVVPISIKRVTDDHIDGKLDC 1137
Query: 869 GLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQH 928
G+ + + + +D + D + + KI + + Q + RES++ +
Sbjct: 1138 GIDAIAGEVEITDRY-DIPVRSLFAPHQTVQGKILYLNRKLLQANVSLRESQVNKPYRRQ 1196
Query: 929 CQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEP 988
+L + E + +++E R++ E + + R+I HP F+ + +A + L+ +
Sbjct: 1197 FDHLRSEWDERQED--ADREALREKTETSGRAM--RVIKHPLFRPFNSAQAEEFLATQSR 1252
Query: 989 GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFE 1047
G+ +IRPSS G ++ T KV DG+Y H DI+E K+++ +GK LK+ G ++
Sbjct: 1253 GDVVIRPSSNGIDHIAATWKVSDGIYQHLDILELDKENE-----FSVGKILKVGGRYSYS 1307
Query: 1048 DLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
DLDE++ +I + + M+++ KF++G+KA+ L KA P R VY F I +HP
Sbjct: 1308 DLDELIVNHIKAMAKKVDDMMNHEKFQEGTKADTGWLTTYTKAN-PRRSVYAFCIDRKHP 1366
Query: 1108 GTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
G F L + N + + P+G++ ++ + D+ L F+
Sbjct: 1367 GYFHLCFKAGENAQLNSWAVKVIPQGYELQRNPYPDMMALCNGFK 1411
>gi|321458766|gb|EFX69828.1| hypothetical protein DAPPUDRAFT_10245 [Daphnia pulex]
Length = 967
Score = 296 bits (759), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 238/878 (27%), Positives = 418/878 (47%), Gaps = 87/878 (9%)
Query: 26 ESTWIYNQLLSGTLPLFGQRGA--GSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMY 83
ES WIY S + Q G G K + + + I + L+L+ Q L++PFI Y
Sbjct: 30 ESEWIYEYAFSRA-SISNQDGTVDGREKVIKEPPKTIEKIRKVLELIRNQHLEVPFIFSY 88
Query: 84 RKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSY 143
RKE L L + NN L ++ D++W L+K K + +
Sbjct: 89 RKEYVLPQL---------SKNN--------------LLRVYKFDEEWTYLEKLKKTMMRH 125
Query: 144 YKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAETEREVDDVDLKFNLHF----- 195
+ + +S+++ ++ + L D + L ++ E+DD+ F L+F
Sbjct: 126 LDEAKKYQSKKLTQNLTESIPENVRVLTDGDTDRLRMVKSIEELDDIYNHFALYFGDFVP 185
Query: 196 ------------------------PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKF 231
P +V VD +Y Y C++AGL + ++
Sbjct: 186 HMLEEYRRSEREEAKERRRLNEDVKPMDV-VDMRKYLHGPHHDFYFICARAGLDGMLKEY 244
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
G S EQ+ + +++ + P E+A + F ++ VL+ A +M AV+I+ E
Sbjct: 245 GLSPEQIAENMRDNYQRHKVDQTSKMPSEIALKYVSPKFPTAPGVLRAANYMLAVQIANE 304
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKA 351
P VRK VR F A+V PT G I+ H +K+L++KP+R Q+L + A
Sbjct: 305 PLVRKCVREFFFKCALVDVIPTKKGLEEINENHNVFPMKFLKDKPVRDLVGDQYLRLVVA 364
Query: 352 EEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLP 409
E+ KLL + ++ + + + K + DG S+ + WND R I++ AL F+LP
Sbjct: 365 EQHKLLTIVFQTQIEGAATARYVDEIKALFTCDGFSELVKKWNDLRNEIIEFALREFVLP 424
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ-RKDNDITPDEEAAPRVLACCWGP 468
++V E + + A+ +++ + L+N + V PY+ D+ D + RV+ +
Sbjct: 425 ALVNELKDKLLNEAQEFVMRACCQQLYNWLKVAPYEVDFDDKDDWDTKNGIRVMGLSYVA 484
Query: 469 GKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG 528
+ F L ++V +R QN+ ++ N L+KF++ +PHV+ +
Sbjct: 485 DLDQEAFCCL------INVDGVCSNYIRLQNILKRKEPSN-LATLMKFIISTKPHVIAVS 537
Query: 529 AVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPG 588
A + T L +D+ I ++VE+ ++ +++ D SL +++ S + +
Sbjct: 538 AESREATMLVEDLRAITAQLVED------NQWPLINVELMDNSLAKVFAFSTRAETEFRE 591
Query: 589 QKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDV 648
++ ++++ R LQNPL + LC +EIL ++ L ++ + V+
Sbjct: 592 YPQLLRVSISIARRLQNPLIEFSQLCTTDKEILCLNYHSMQKQLCQEDLLKGLYLEFVNR 651
Query: 649 TNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGK 707
TN+VG+DIN AI+ +QFI GLGPRK +L + L + R VTA +G
Sbjct: 652 TNEVGVDINRAINYPHTANLVQFICGLGPRKGQALIQILKENNQRLENRTQLVTACHMGP 711
Query: 708 KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDD 767
KVF+N GF+++ + S+ ++++LD +R+HPE+Y A+++A ++ DD
Sbjct: 712 KVFINCAGFIKIDTNSLGDSTESYVEVLDGSRVHPETYEWARKMA-------VDALEYDD 764
Query: 768 EDALEM-AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQ 823
EDA A+E + + P+ LK LD E +R+ +KR TLY IR EL H ++D R
Sbjct: 765 EDANPAGAVEEILEAPERLKDLDLDAFADELERQGFGDKRITLYDIRSELNHRYKDGRPS 824
Query: 824 YKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQR 861
Y++PS ++ F M++ ET T G++V ATV +Q ++
Sbjct: 825 YQQPSPEDIFNMVTKETPQTFFIGKLVLATVTEIQRRK 862
>gi|406607072|emb|CCH41587.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 1427
Score = 296 bits (759), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 291/1129 (25%), Positives = 515/1129 (45%), Gaps = 92/1129 (8%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L + + L++PFI +R++ L E ++VN + TL + LW I L
Sbjct: 322 LTFITKENLEVPFIFSHRRDHLLKTTIIGEGDDVNTE-------VQTLLEEQDLWRIVFL 374
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D ++ + ++K+ + R++ E L+++ L I+ A ++ D
Sbjct: 375 DIEFHSVMEKKNQV------------RKLMSE--LSIDDDL---ITSHFYGATEITDLQD 417
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQL---- 242
+ N ++ ++ K+ R+T Y L+EV G S++Q +
Sbjct: 418 IFENINFNYASQLKDINT---KKVHRTTLYERVKADRLYEVVQAIGISADQAAENIVQGT 474
Query: 243 SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF 302
L D P E++ + SQA L+ ++H A ++ + +RKY+R+ F
Sbjct: 475 RLYATNDTDISPYNLAEQICEDENSLYAKPSQA-LEVSKHYFAEQLFVDVRLRKYLRNTF 533
Query: 303 MDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK 362
D A +S T G ID +A K+ + + L ++ E E + IK
Sbjct: 534 RDYAKLSISLTEQGRLKIDKNSPYADFKYAINRAIDTLYAQPDLFLRMLEAESQHLIEIK 593
Query: 363 LPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
L S + F D LSDG S A WN+ R A+ LLP + + +
Sbjct: 594 LEIISADSFFEDMASRVLSDGQSDIAFEWNEFRRSAFDIAIKK-LLPLVTLNIKENIRRE 652
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE--AAPRVLACCWGPGKPETTFV---M 477
+ L+ + A+ +KV P+Q P E +VLA G G+ + V +
Sbjct: 653 CERLLVTQVRDAVLSKVDQAPFQ------PPGTEFGTVAKVLAISPGNGRFGSDAVICSL 706
Query: 478 LDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
+D G V+ LR ++ R Q+ + + L + D +P V+ + N+ L
Sbjct: 707 IDEHGAFVEDRKLDGNPLRHRD-RLQEGEIAFEVELEAVIRDWKPDVIGINGYNVQSHKL 765
Query: 538 KDDIYEIIFKMVEEHPRDV-GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA 596
+ I K+++E + G + + +V+ ++ + Y++S + ++ P + VK
Sbjct: 766 ----FLAIQKIIQEQQLTLEGDDSQLIELVWVNDEVALRYQSSNKAYEEFPDKPAVVKYT 821
Query: 597 VALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDI 656
+AL RY+Q+PL +L G +I S P +N L+ + I +VD+ N G+DI
Sbjct: 822 IALARYMQSPLLEYLSL---GADIASLSFHPHQNLLSEERLNEAIMSALVDIVNMTGVDI 878
Query: 657 NLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGL--GKKVFVNAV 714
N + + A L +++GLG RKA L R+ ++ +F+R+ +T + G +F+N
Sbjct: 879 NKCVSNSYLAAALPYVAGLGERKAFGLLRA-IQQHPLFSRQALITNENIRIGSTIFLNCA 937
Query: 715 GFLRV------RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDE 768
FLR+ R + +A ++ + LLDDTRIHPE Y LA ++A + + E ++N+ +
Sbjct: 938 SFLRIPQNVTRRNAVRANEEAEAVTLLDDTRIHPEDYTLADKMAADALDLG-EDEINELK 996
Query: 769 DALEMAIEHVRDR-----PDLLKTYLLDRHIKEKK---RENKRETLYLIRRELIHGFQDW 820
DA A + + DR +LL++ +L+ + K+ + + KR TL +I EL F +
Sbjct: 997 DA--PAGDTIIDRLIEQGTELLQSLILEDYSKQLETTYHKKKRATLQMILEELQGPFAEI 1054
Query: 821 RNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYS 880
R Y E F ++G++ D+ G V+ +++RV + L S D +
Sbjct: 1055 RKSYHILQPGEVFESLTGDSPDSFHIGVVLPISIKRVNNYE-VSGLTSNQIYCTANSDRA 1113
Query: 881 DDWRDS-ELSDKLHEGDILTCKIKSIQKNRY--QVFLVCRESEMRNNRYQHCQNLDPYYH 937
+ D+ L D G + K+ +I ++ +V L+ R+ + +++ + +
Sbjct: 1114 LERGDTRSLPDIYTFGQAVPAKLLNIDYEKFAAEVSLLKRDIQNPTSKFIRKEITQWNFD 1173
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSS 997
+ER E++K K+ R+I HP FQN +A +A L+ KE G +IRPSS
Sbjct: 1174 QERYDEDIEKKKEETSKK------ANRIIKHPNFQNFSAVQAQNYLAPKERGSVVIRPSS 1227
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYI 1057
+G ++ +T KV + ++ H D++E K+ S +G+ L IG F DLDE+++ Y+
Sbjct: 1228 KGNDHIAVTWKVDNNLFQHVDVVEHDKE-----SDFSLGRRLVIGNTEFSDLDEIIETYV 1282
Query: 1058 DPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRS 1117
+V + M ++ KFRKG+K EV + L P R Y F + H+ PG F+L + S
Sbjct: 1283 GEIVKKVNEMTNHDKFRKGTKDEVTQWLDNYAKANPKRASYAFALDHKRPGWFLLLFKTS 1342
Query: 1118 TNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD--PQGDSAP 1162
N + P GF+ + D+ L F+ I Q +AP
Sbjct: 1343 ANSKMYIWNVKAIPNGFELHGYPYPDMTLLCNGFKTLIKSKLTQKQTAP 1391
>gi|239613293|gb|EEQ90280.1| transcription elongation factor spt6 [Ajellomyces dermatitidis ER-3]
Length = 1438
Score = 296 bits (758), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 299/1185 (25%), Positives = 526/1185 (44%), Gaps = 96/1185 (8%)
Query: 6 CRSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR 65
C+ RK E +E+ WI N L L +R +E SI++
Sbjct: 284 CQIARKPYKHVILTDEQFKEEAIWISN------LMLLKKRLDPDLREPFQRSIAK----- 332
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + ++PFI +RK+ + K + + N D + + L LW I
Sbjct: 333 VLEFMITDDWEVPFIFQHRKDYLIHAAKVPVSPDPSNPDGPEYVVKAEKLLNMIDLWDIF 392
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETER 182
+ D K+ L ++++LQ + YD + N + +F+S+ L A T
Sbjct: 393 EYDLKFRSLVDKRNSLQ------------KTYDNLQAVSNVKDDIFESM---LPLAVTME 437
Query: 183 EVDDVDLKFNLHFPP-----------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKF 231
E+ DV +P GE G+ + + K R T + + + F
Sbjct: 438 ELQDVQDYLYFQYPSQLRDIAVVNGGGEDGLSKQRRKATTR-TFSERVRNSRAYGLVRAF 496
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
G +++ E EDP E P+ MA N F + L+ ++ M A EI+
Sbjct: 497 GITADAFAQNALKEGKRQYTEDPAEQPDVMADNLLDDNFTNGGHALKASKSMFAEEITMN 556
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ-- 349
P +RK +R F N V+ T G ID H + K+LR + L L ++
Sbjct: 557 PKMRKVMRQAFYMNGVIECFRTEKGLKKIDEQHPYYEFKYLRNQQLSDIARRPELFLRML 616
Query: 350 KAEEEKLLQVTIKLPE-DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
KAEEE L+ V ++ D+ K L+S + SD S+ A WN +R ++ AL L
Sbjct: 617 KAEEEGLVDVKVRFQNFDNFKKNLYSQIE----SDNFSELADAWNRERREVVDMALGK-L 671
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
M + + + ++ + E +A ++ PY+ K + PRVLA G
Sbjct: 672 ERIMSRGVKENIRTECENHVAKECREAFSLRLDQAPYKPKGMILG----TIPRVLALSNG 727
Query: 468 ---PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHV 524
GK + ++ G V++ L+L K D ++ + +P V
Sbjct: 728 NGVVGKDPIYWAWVEEDGRVLENGKFVDLSLGDSGRMIADGK--DVAAFVELVDRRKPDV 785
Query: 525 VVLGAVNLSCTSLKDDIYEIIFKMV---EEHPRDVGHEM-DELSIVYGDESLPRLYENSR 580
+ + + L + +++ + D E+ D L +V ++ + RLY+ S
Sbjct: 786 IGVSGFSPETRKLSKQLSDLVSSKDLRGATYTNDYDEEVSDHLEVVMVNDEVARLYQTSE 845
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
+ + PG VAL +YLQNP+ A+L GR+I+S + P + + D+
Sbjct: 846 RAKMEHPGFATLTHYCVALAKYLQNPMKEYASL---GRDIVSIQFKPGQQLVPQDKILKQ 902
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDF 699
+E +VD+ N G+DIN A+ L ++ GLGPRKAA L + + + G + R +
Sbjct: 903 LETALVDMVNLCGVDINEAVTDMATANLLPYVCGLGPRKAAHLLKIINMNGGIVNNRMEL 962
Query: 700 VTAH----GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ + +G KV+ N FL + S+ D LD+TR+HPE Y + +++A +
Sbjct: 963 LGVNAQYPAMGVKVWNNCASFLFI----DYDSTDPDADYLDNTRVHPEDYDIGRKMAADA 1018
Query: 756 YNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYL 808
D E D+ + D ++ E +DR + L +++ + KR TL
Sbjct: 1019 LELD-EEDIKAETDENGQGAIIRKLIKEDAQDRVNDLILEEYAEQLEKNLSQRKRATLET 1077
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLES 868
IR EL +++ R Q+ D F M++GET ++LAEG VV +++RV L+
Sbjct: 1078 IRAELQQPYEELRKQFAFLGTDTIFTMLTGETPESLAEGMVVPISIKRVTDDHIDGKLDC 1137
Query: 869 GLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQH 928
G+ + + + +D + D + + KI + + Q + RES++ +
Sbjct: 1138 GIDAIAGEVEITDRY-DIPVRSLFAPHQTVQGKILYLNRKLLQANVSLRESQVNKPYRRQ 1196
Query: 929 CQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEP 988
+L + E + +++E R++ E + + R+I HP F+ + +A + L+ +
Sbjct: 1197 FDHLRSEWDERQED--ADREALREKTETSGRAM--RVIKHPLFRPFNSVQAEEFLATQSR 1252
Query: 989 GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFE 1047
G+ +IRPSS G ++ T KV DG+Y H DI+E K+++ +GK LK+ G ++
Sbjct: 1253 GDVVIRPSSNGIDHIAATWKVSDGIYQHLDILELDKENE-----FSVGKILKVGGRYSYS 1307
Query: 1048 DLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
DLDE++ +I + + M+++ KF++G+KA+ + L P R VY F I +HP
Sbjct: 1308 DLDELIVNHIKAMAKKVDDMMNHEKFQEGTKADTEGWLTTYTKANPRRSVYAFCIDRKHP 1367
Query: 1108 GTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
G F L + N + + P+G++ ++ + D+ L F+
Sbjct: 1368 GYFHLCFKAGENAQLNSWAVKVIPQGYELQRNPYPDMMALCNGFK 1412
>gi|16877736|gb|AAH17105.1| SUPT6H protein, partial [Homo sapiens]
Length = 733
Score = 295 bits (755), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 203/664 (30%), Positives = 342/664 (51%), Gaps = 74/664 (11%)
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
NS+ S + +++AV+L R +Q+PL A +C +IL K PL+ + +E
Sbjct: 1 NSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEEL 60
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTR 696
+ ++ N+VG+D+N AI + A +Q++ GLGPRK L + L + + +R
Sbjct: 61 LNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESR 120
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY 756
VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y A+++A +
Sbjct: 121 TQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDA- 179
Query: 757 NRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRREL 813
+E D + ++ A+E + + P+ LK LD +E +R+ +K TLY IR EL
Sbjct: 180 ---LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAEL 236
Query: 814 IHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRVQGQ---RAICV 865
++D R Y+ P+ +E F M++ ET +T G+++ V RR QG+ +AI
Sbjct: 237 SCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRN 296
Query: 866 LESGL--AGMLMKEDY---SDDWRDSE---------------------------LSDKLH 893
E+GL ++++ S+ W + LSDK+
Sbjct: 297 DETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVV 356
Query: 894 E--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNLDPYYHEERSSR 943
+ G + C+I I ++ L CR S++ RNN ++ + D YY + +
Sbjct: 357 KRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK--DTYYDFDAEAA 414
Query: 944 QSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYL 1003
+QE+ K K+ + K R+I HP F N+ +A K++ + G+ IIRPSS+G ++L
Sbjct: 415 DHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHL 473
Query: 1004 TLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSH 1063
T+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+V RY+ P+ S
Sbjct: 474 TVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEIVARYVQPMASF 528
Query: 1064 LKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNP 1120
+ +L+++ ++ G + +++ELL K E PT I Y E PG F+L Y P
Sbjct: 529 ARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKP 588
Query: 1121 HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGG 1180
EY+ + P+GF++R ++F ++ L +F+ H DP PS S R+PA+
Sbjct: 589 RIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT-----RTPASIN 643
Query: 1181 STAS 1184
+T +
Sbjct: 644 ATPA 647
>gi|378729356|gb|EHY55815.1| transcription elongation factor SPT6 [Exophiala dermatitidis
NIH/UT8656]
Length = 1422
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 308/1180 (26%), Positives = 532/1180 (45%), Gaps = 152/1180 (12%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSIS-RDDIMRFLDLLHLQKLDIPFIAMY 83
DE++WI N +L G + DL R I + L+ + ++PFI
Sbjct: 295 DEASWIANLMLPGK------------QFNPDLHEPFRRAIAQVLEFMVRDDYEVPFIFQN 342
Query: 84 RKEECLSLLKDLEQNEVNNDNNDDFERTPT-LKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
RK+ L +++ + + D ND T L + LW I + D K+ L +++ ALQ
Sbjct: 343 RKDYLLHVVQKVVGK--DEDGNDRIVADATRLLVQRDLWQIFEHDLKYRALIEKRQALQK 400
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDV-------------DL 189
Y+ + +S I D+ + L A T E+ D+ DL
Sbjct: 401 TYQ---DLKSTNIPDDP----------VFQEMLPLAATMEELQDLQDYLYFQYASQLKDL 447
Query: 190 KFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGD 249
+ P G++ Q K R T Y + + + FG +++ S + +
Sbjct: 448 ALTSNGEPN--GINMSQKKAATR-TVYEEIRASKAFGLVRAFGITADGFAQNASRQGVRT 504
Query: 250 ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
EDP ++PE +A F + VL+ AR M E++ P R VR V+
Sbjct: 505 YAEDPSDSPENLADTMIDEEFPTGSKVLKAARSMFVEELTNNPRFRGLVRKTVYIEGVID 564
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKLPEDS 367
T G ID H + K+LR + R F + L ++ KAEEE L++V ++L +
Sbjct: 565 CHRTEKGLKKIDEQHPYYEFKYLRNQDFRSFFERPDLFLKMLKAEEEGLIEVKVRL--RN 622
Query: 368 LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGRAKS 425
L +H +D S A WN +R ++ A+D L+ +VKE + + ++
Sbjct: 623 LEGFKKQLYKHIETDNYSTIADAWNAERRDVVSAAVDKVMRLMGRLVKEN---LKEQCEN 679
Query: 426 WLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PGKPETTFVMLDSSG 482
+ +E + ++ PYQ + + PRVL G G+ + ++ G
Sbjct: 680 AIGIECREEFNQRLDQAPYQPRGM----KKGTTPRVLTLSAGGGTIGRDPIFWAYVNDDG 735
Query: 483 EVVDVLFTGCLTLRSQNVRDQQSKKNDQER----------LLKFMMDHQPHVVVLGA--- 529
V+ ++ R ++ DQER LL+ + +P V+ +
Sbjct: 736 RVL------------EHGRFKELGPGDQERSIPDGKDVEALLEVIRRREPEVIGVSGWSP 783
Query: 530 ------VNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
NL+ D+ +F +E RD + L ++ ++ + R+Y+ S +
Sbjct: 784 EARKLQANLATLVQNHDLRGPVFS--DEDDRD---RSELLEVIMVNDEVARMYQTSDRAK 838
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQ 643
PG VAL RY+Q+PL A L GR+I+S P +N L ++ +E
Sbjct: 839 HDHPGFPQLALYCVALARYMQDPLKEYAAL---GRDIVSISFHPAQNLLPQEKLLKKLEM 895
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTA 702
+VD N VG+DIN A L +++GLGPRKA+ L + + + G I TR+D +
Sbjct: 896 ALVDTVNMVGVDINEATSDSAVANLLPYVAGLGPRKASHLLKVMNLNGGFITTREDLLGL 955
Query: 703 H----GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EV 755
+ +G KV+ NA L + Q+ +S++ LD TR+HPE Y +A+++A E+
Sbjct: 956 NEKHSAMGFKVWSNAAATLYIPFE-QSEPTSEY---LDGTRVHPEDYDIARKMAADALEL 1011
Query: 756 YNRDIEGDLNDDEDAL-------EMAIEHVRDRPDLLKTYL--LDRHIKEKKRENKRETL 806
DIE + + A E A E V D +L+ Y L++++ K KR TL
Sbjct: 1012 DEEDIEAERQEGGSAAIVRRLIREDAQERVNDL--VLEEYAEQLEKNLNAK----KRTTL 1065
Query: 807 YLIRRELIHGFQDWRNQYKEP-SQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV 865
IR EL +++ RN ++ + E F M++GET ++L G V +++++
Sbjct: 1066 ENIRAELNEPYEELRNPFRSNLGESEIFTMLTGETRESLQRGMNVPISLKKITDSYVEGK 1125
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDK----LHEGDILTCKIKSIQKNRYQVFLVCRESEM 921
L+ GL ++ ED W ++ +S K LH+ + I SI + + V + R+ ++
Sbjct: 1126 LDCGLDAIV--ED--GQWSETGMSPKQLYTLHQ--TVPAHITSINRKDFLVTVSLRDDQL 1179
Query: 922 RN--NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEA 979
+ R+ H + +++E R+ Q+K E++ R++ HP F+ A +A
Sbjct: 1180 KKPFKRFNH----NDRHYDEWDDREEAQDKKLLEEKTDSGSRATRVVKHPLFRPFNAKQA 1235
Query: 980 MKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTL 1039
+ L+ + G+ +IRPSS+G +L +T KV DG++ H D++E K+++ +G+TL
Sbjct: 1236 EEYLANQNRGDVVIRPSSKGTDHLAVTWKVADGIFQHIDVLELDKENE-----FALGRTL 1290
Query: 1040 KI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVY 1098
+I G+ + DLDE++ ++ + + M KF+ SKA ++E L P R +Y
Sbjct: 1291 RIGGKYNYSDLDELIVLHVKAMARKVDEMCGNEKFQDKSKAALEEWLTTYTNANPKRSMY 1350
Query: 1099 GFGISHEHPGTFILTYIRSTNPHHE--YIGLYPKGFKFRK 1136
F I+ E PG F L + N + + P+GF+ K
Sbjct: 1351 QFCINRERPGQFHLVFKAGQNAKLMDWSVRVIPQGFELMK 1390
>gi|408397531|gb|EKJ76672.1| hypothetical protein FPSE_03083 [Fusarium pseudograminearum CS3096]
Length = 1408
Score = 295 bits (754), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 294/1179 (24%), Positives = 526/1179 (44%), Gaps = 105/1179 (8%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDL-SISRDDIMRFLD 68
RK E +E+ WI NQL + ++G S DL S + + L+
Sbjct: 284 RKTFKSLQLTAEQFKEEARWITNQL-------WPKKGLAS-----DLQSPFGKAVGKVLE 331
Query: 69 LLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDK 128
+ ++++P++ +RK+ L K N + D + L LW I +LD
Sbjct: 332 FFIVDEVEVPYVFQHRKDYLLHTRKTRNPNRDDPDAPEYVISADKLLNQDDLWKILELDI 391
Query: 129 KWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD 188
K+ +++AL+ + + + + ++ + D + + A T E+ D
Sbjct: 392 KFRSFVDKRNALE-----------KTVDNLKGMEIHDAMVDEM---IPEATTMEELQD-- 435
Query: 189 LKFNLHFPPGEVGVDEGQY-------KRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGL 240
L+ LHF G+ D KRP +S + + +G S++QL
Sbjct: 436 LQDYLHFQYGQQLKDLAALAGNLSLTKRPGSKSNLLERVRQGKAYGFVRAYGISADQLAK 495
Query: 241 QLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+D + P ++A + +F++ V+ AR M + E+ P +RK+ R+
Sbjct: 496 NALRHGKKVTPDDDAQYPMDLADSLIDDVFSTGDQVISAARQMYSEELFASPRMRKHFRN 555
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQ 358
+ A +S T G ID H + +K+L+ + + + +L + KAEEE L
Sbjct: 556 SYYQAAEISCRRTEKGLRRIDDSHPYYEIKYLQNQAIADLVHQPELFLKMMKAEEEGL-- 613
Query: 359 VTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDA---LDNFLLPSMVKEA 415
VTIKL + + + S+ S A+ W ++R+ +L A L+ + ++ +
Sbjct: 614 VTIKLDMPARYDFRQHLYQEFESENFSDRAEQWREERKKVLDVAYPKLEKIIAKNVKEVI 673
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PGKPE 472
R+ EY K ++ PY+ K + PRVL G P +
Sbjct: 674 RTFCQDEVLKMCREEYAK----RLDQAPYKPKGMILG----TTPRVLVLSNGMSDPARDP 725
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
+ ++ G V++ G L RD++ + E + + +P V+ + +
Sbjct: 726 ICWAWVEEDGRVIEQGKLGNLA------RDERQR----EEFEELVKRRRPDVIGVSGWSA 775
Query: 533 SCTSLKDDIYEIIFKM-----VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
T L D+ ++ + E P + + L +V ++ + RLY++S + + P
Sbjct: 776 ETTKLVRDLEGLVNEKGLMGPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRALAEHP 835
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ VAL RY+QNP+ A L G+++ S P +N L D+ ++ MVD
Sbjct: 836 SLNPITRYCVALARYMQNPMKEYAAL---GKDVSSLSYHPCQNLLPTDKLAKYLDSAMVD 892
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLG 706
+ N G+DIN A++ + L ++SGLGPRKA S+ +++ GA+ TR + V G
Sbjct: 893 MVNLCGVDINEAMNDTYTANLLPYVSGLGPRKATSVIKAINANGGAVGTRDELVGDPDSG 952
Query: 707 K------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYN 757
K +V+ N FL + SS D LD+TR+HPE Y L +++A E+
Sbjct: 953 KLPVVGPRVWNNCASFLFIEYEATNPSS----DPLDNTRVHPEDYELGRKMAADALELDE 1008
Query: 758 RDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIRRELI 814
D++G+ +++ + D D + +L+ + ++ +R + KR TL IR EL
Sbjct: 1009 EDVKGETDENGPGAIVRKLFKMDEQDKVNELVLEEYAEQLERNYSQRKRATLETIRAELQ 1068
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+++ R + S E F M +GET+ TL EG +V VR V+ AI L+ G+ G +
Sbjct: 1069 APYEELRRNFALLSASEIFTMFTGETKHTLCEGMIVPVNVRVVKDDFAIVKLDCGIEGRV 1128
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
+ S S + + L G KI I + L R+ +R Y+ NL
Sbjct: 1129 EGHEVS---HRSSIKEVLSSGQTAQAKILDINYKDFMAKLSMRDDALRVP-YKRPINLGR 1184
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ ++E K+K + +R++ HP F+ +A + L ++ GE IIR
Sbjct: 1185 DGWDYVLEAADKEELREKDKTTGR---TQRVVKHPNFKPFNGLQAEEYLGSQPNGEVIIR 1241
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVV 1053
PSS+G +L +T KV DGV+ H D++E K+ + +GK L++ G+ T+ DLDE++
Sbjct: 1242 PSSKGNDHLAVTWKVADGVFQHIDVLEMQKETE-----FAVGKLLRVGGKYTYTDLDELI 1296
Query: 1054 DRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILT 1113
++ + ++ ++ + K++ S+ E ++ L PTR Y F I +HPG F L
Sbjct: 1297 VEHVKAMARKVEELMRHDKYQNRSRGETEKWLTTYIDANPTRSTYAFCIDTKHPGYFWLC 1356
Query: 1114 Y--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ R+ + P+GF+ + + D+ L F+
Sbjct: 1357 FKASRAAKVIALPVRAIPQGFELKGYQYPDMRALCNGFK 1395
>gi|154281101|ref|XP_001541363.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411542|gb|EDN06930.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1424
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 302/1193 (25%), Positives = 521/1193 (43%), Gaps = 121/1193 (10%)
Query: 6 CRSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR 65
C+ RK E +E+ WI N L L +R +E SI++
Sbjct: 285 CQIARKPYKHVILTDEEFKEEAIWISN------LMLLKKRIDPDLREPFQRSIAK----- 333
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + ++PFI +RK+ + K + + N D + + L LW I
Sbjct: 334 VLEFMITDDWEVPFIFQHRKDYLIHAAKVPVSPDPSNPDGPEYVVKAEKLLNMIDLWDIF 393
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK-SLEAAETERE 183
+ D K+ L +++ LQ + YD + N + D+I + L A T E
Sbjct: 394 EYDLKFRSLVDKRNTLQ------------KTYDNLQAISNVK--DNIFELMLPLAVTMEE 439
Query: 184 VDDVDLKFNLHFP-----------PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
+ DV +P GE G + + K R T + + + FG
Sbjct: 440 LQDVQDYLYFQYPGQLKDIAMVNGSGENGSSKQRRKATTR-TFSERVRNSRAYGLVRAFG 498
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
+++ E EDP E P+ MA N F + L+ A+ M A E++ P
Sbjct: 499 ITADAFAQNALKEGKRQYTEDPAEQPDVMADNLVDENFTNGGHALRAAKAMFAEELTMSP 558
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--K 350
+RK +R F N V+ T G ID H + K+LR + L L ++ K
Sbjct: 559 KMRKVMRQAFYMNGVIECFRTEKGLKKIDEQHPYYEFKYLRNQQLSDIARRPELFLRMLK 618
Query: 351 AEEEKLLQVTIKLP--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
AEEE L++V ++ E+ L+S + SD S+ A WN +R ++ AL L
Sbjct: 619 AEEEGLVEVKVRFQNFENFKKNLYSQIE----SDNFSELADAWNRERREVVDMALGK-LD 673
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG- 467
M + + + ++ + E +A ++ PY+ K + PRVLA G
Sbjct: 674 RIMSRGVKENIRTECENHVAKECREAFSLRLDQAPYKPKGMILG----TIPRVLALSNGN 729
Query: 468 --PGKPETTFVMLDSSGEV------VDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
GK + ++ G V VD+ + S V D ++ +
Sbjct: 730 GVVGKDPIYWAWIEEDGRVLENGKFVDLSLGDSGRMVSDGV--------DVAAFVELVDR 781
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEII-------FKMVEEHPRDVGHEMDELSIVYGDESL 572
+P V+ + + L + +++ E+ +V D L +V ++ +
Sbjct: 782 RKPDVIGVAGFSPETRKLYKQLVDLVSSKDLRSATYTNEYDEEVS---DHLEVVIVNDEV 838
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFL 632
RLY+ S + + PG VAL +YLQNP+ A+L GR+I+S + P + +
Sbjct: 839 ARLYQTSERAKMEHPGFATLTHYCVALAKYLQNPMKEYASL---GRDIVSIQFKPGQQLV 895
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAG 691
D+ +E +VD+ N G+DIN A+ L ++ GLGPRKAA L + + + G
Sbjct: 896 PEDKILKQLETALVDMVNLCGVDINEAVTDIATANLLPYVCGLGPRKAAQLLKIINMNGG 955
Query: 692 AIFTRKDFVTAH----GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
+ R + + + +G KV+ N FL + S+ D LD+TR+HPE Y +
Sbjct: 956 IVNNRMELLGVNAQYPAMGVKVWNNCASFLYIDYD----STDPDADYLDNTRVHPEDYDI 1011
Query: 748 AQELAKEVYNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE 800
+++A + D E D+ + D ++ E +DR + L +++ +
Sbjct: 1012 GRKMAADALELD-EEDIKAETDENGQGAIIRKLIKEDAQDRVNDLILEEYAEQLEKNLNQ 1070
Query: 801 NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQ 860
KR TL IR EL +++ R Q+ D F M++GET ++LAEG VV +++RV
Sbjct: 1071 RKRATLETIRAELQQPYEELRKQFAFLGTDAIFTMLTGETAESLAEGMVVPISIKRVSDD 1130
Query: 861 RAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
L+ G+ + + + +D + D + + KI + + Q + RES+
Sbjct: 1131 HIDGKLDCGIDAIAGEVEITDRY-DIPVRSLFSPHQTVQGKILYLNRKLLQANVSLRESQ 1189
Query: 921 MRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAM 980
+ + +L + E + +++E R++ E + + R+I HP F++ A +A
Sbjct: 1190 ISKPYRRQFDHLRDEWDERQED--ADREALREKTETSGRTM--RVIKHPLFRSFNAAQAE 1245
Query: 981 KLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLK 1040
+ L+ + G+ +IRPSS G +L T KV DGVY H DI+E K+++ +GK LK
Sbjct: 1246 EFLAPQSRGDVVIRPSSNGIDHLAATWKVSDGVYQHLDILELDKENE-----FSVGKILK 1300
Query: 1041 I-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYG 1099
+ G ++ DLDE + +I + + M+++ KF++GSKA+ A P R Y
Sbjct: 1301 VGGRYSYSDLDEFIVNHIKTMAKKVDDMMNHEKFQEGSKAD---------AANPRRSAYA 1351
Query: 1100 FGISHEHPGTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
F I +HPG F L + N + + P+G++ ++ + D+ L F+
Sbjct: 1352 FCIDRKHPGYFHLCFKAGENAQLNSWAVKVIPQGYELQRNPYPDMMALCNGFK 1404
>gi|302504852|ref|XP_003014647.1| hypothetical protein ARB_07209 [Arthroderma benhamiae CBS 112371]
gi|291177953|gb|EFE33744.1| hypothetical protein ARB_07209 [Arthroderma benhamiae CBS 112371]
Length = 1420
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 289/1172 (24%), Positives = 522/1172 (44%), Gaps = 98/1172 (8%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R E ++++ L+ + ++PFI
Sbjct: 290 EQFREEAVWISN------LMLLKKRLDSDLHEPFQRAVAK-----VLEFMVTDDWEVPFI 338
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + +K + N D L LW I + D K+ L +++
Sbjct: 339 FQHRKDYLIHAVKIPIPDGGTNPDGGKYIVEAEKLLSMIDLWDIFEYDLKFRALIDKRNT 398
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDV------------ 187
LQ+ Y +T + ++F+ + L AA T E+ DV
Sbjct: 399 LQTTYDNL----------QTIANVKDEMFEEM---LPAAITMEELQDVQDYLYFQYSIEL 445
Query: 188 -DLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK 246
D+ GE G Q ++ T + + + + FG + + +
Sbjct: 446 KDMALATANHEGENGT-AAQRRKASTKTFFERVRNSRAYGLVRAFGITPDAFAQNVMETG 504
Query: 247 MGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA 306
++D E P +MA N + F++ ++ AR M A E++ P VRK +R F +
Sbjct: 505 RRQYIDDASEKPTDMADNLLDSSFSNGAHAMKAARSMFAEELTMSPRVRKVMRQAFYMSG 564
Query: 307 VVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKLP 364
V+ T G ID H + K+LR++ + L ++ KAEEE L+ + +
Sbjct: 565 VIECYRTEKGLKKIDEHHPYYEFKYLRDQQISDIARRPELFLRMLKAEEEGLVDIKVHFK 624
Query: 365 E-DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
+ D+ K L+ + + SD S+ A WN +R+ +L AL L M K + +
Sbjct: 625 DFDNFKKRLYPEIQ----SDNSSEVADAWNKERKDVLDLALSK-LEKIMSKGVKENIRSE 679
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFVMLD 479
++ + E + ++ PY+ K + PRVLA G G K + ++
Sbjct: 680 CENHVARECREVFSTRLDQAPYKPKGMILG----TIPRVLALTNGSGIVGKDPIYWTWVE 735
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
G V++ LTL + K D E ++ + +P V+ + + L
Sbjct: 736 EDGRVLEHGKFVDLTLGDPDRMIADGK--DVEAFVELVERRKPDVIGVSGQSPETRKLYK 793
Query: 540 DIYEIIFK-------MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGN 592
+ E++ +E +V D L +V ++ + RLY+ SR + PG
Sbjct: 794 QLSELVQAKDLRGAFYTDERDEEVS---DILEVVIVNDEVARLYQTSRRAEVDHPGFSLQ 850
Query: 593 VKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQV 652
+ VAL +YLQNP+ A+L GR+++S + P + + D+ +E +VD+ N V
Sbjct: 851 SRYCVALAKYLQNPMKEYASL---GRDVVSIQFRPGQQLIPQDKLLKQLETALVDMVNLV 907
Query: 653 GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG----LGK 707
G+DIN A+ L ++SGLGPRKA+ L + + + G + +R + + + +G
Sbjct: 908 GVDINEAVSDVSTANLLTYVSGLGPRKASQLLKVINMNGGVVNSRMELLGVNAQYPAMGV 967
Query: 708 KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNRDIEGDL 764
KV+ N FL + + D LD+TR+HPE Y + +++A E+ DI+ +
Sbjct: 968 KVWNNCASFLYIDYDNADPDT----DYLDNTRVHPEDYDIGRKIAADALELDEEDIKAET 1023
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWR 821
+++ + D D + LL+ + ++ + KR TL IR EL +++ R
Sbjct: 1024 DENGQGAIVRKLIKEDAQDKVNDLLLEEYAEQLENNLNQRKRATLETIRAELQQPYEELR 1083
Query: 822 NQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSD 881
Q+ D F M +GET ++LA+G VV T++RV L+ G+ ++ + + +D
Sbjct: 1084 KQFVFLGTDAIFTMFTGETAESLAQGMVVPITIKRVSDDHIDGKLDCGIDALVPESEMTD 1143
Query: 882 DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERS 941
+ D + KI + + + + RE ++ N Y+ + LD E
Sbjct: 1144 RY-DIPVRSLYAPHQTTLAKITYLNRKSFVANVSLREDQV-NKPYR--RQLDHMRGEWDE 1199
Query: 942 SRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPS 1001
++ E ++A KEK + R+I HP F+ +A + L+ + G+ +IRPSS+G
Sbjct: 1200 DQEREDQEAMKEKTQTDQR-ALRVIKHPLFRPFNGRQAEEFLAPQSRGDVVIRPSSKGHD 1258
Query: 1002 YLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPL 1060
+L +T KV DGVY H D++E KD++ +G+ LKI G+ ++ DLDE++ ++ +
Sbjct: 1259 HLAVTWKVADGVYQHIDVLELDKDNE-----FTVGRILKIGGKYSYTDLDELIVNHVKAM 1313
Query: 1061 VSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN- 1119
+ M + K++ G+K + L P R Y F + +HPG F L +
Sbjct: 1314 AKKVDDMTVHEKYQSGTKEATEGWLTTYTTANPKRSAYAFCLDTKHPGYFHLCFKAGLKA 1373
Query: 1120 PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
P + + + + P+G++ ++ + D+ L F+
Sbjct: 1374 PLNSWPVKVIPQGYELQRTPYPDMRALCNGFK 1405
>gi|116179808|ref|XP_001219753.1| hypothetical protein CHGG_00532 [Chaetomium globosum CBS 148.51]
gi|88184829|gb|EAQ92297.1| hypothetical protein CHGG_00532 [Chaetomium globosum CBS 148.51]
Length = 1416
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 281/1126 (24%), Positives = 497/1126 (44%), Gaps = 92/1126 (8%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERT---PTLKWHKV 119
I + L+ + +++P++ +R++ + K +N+ N D+ D E T L
Sbjct: 326 IGKVLEFFIIDGVEVPYVFQHRRDYLIHAKK--VRNQDNRDHPDAPEYTVDAEKLLTQDD 383
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I +LD K+ L ++++AL+ E R D + + + A
Sbjct: 384 LWRILELDIKFRSLVEKRNALERSVDNLKEANIRD--------------DVLEEMIHQAA 429
Query: 180 TEREVDDVDLKFNLHFPPGEVGVD------EGQYKRP-KRSTKYSSCSKAGLWEVASKFG 232
T E+ D+ N + + + KRP ++ + ++ + G
Sbjct: 430 TLEELQDLQDYLNFQYSAQLKDIAAMGNGASKEMKRPGAKTALFERIRRSQAYNFVRALG 489
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
S + L E +D P ++A F + + V+ AR M A E+ P
Sbjct: 490 ISPDSLAQNALREGKKVSSDDDARLPVDLADQLADDDFPTGEQVINAARQMYAEELFVSP 549
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQK 350
+RK+ R + VS T G ID H + +K+L +R +L + K
Sbjct: 550 RMRKHFRIQYYLMGSVSCHRTEKGLRKIDEAHPYYEIKYLVGHTIRDLAVRPEIFLKMMK 609
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPS 410
AE++ L++V + L D + + SD S A WN +R+ +L A L
Sbjct: 610 AEDDGLVEVNLTLEND--REFRRQLYNEFASDNFSDLADAWNSERQKVLDIAFLK-LEKV 666
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK 470
+ K + + + LL + + ++ P + K + PRVL G G
Sbjct: 667 IAKGVKDSLRTACQEELLKTCREEYFKRLDQAPLKPKGMVLG----TTPRVLTLSNGMGD 722
Query: 471 PE---TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
P ++ ++ G V++ + L RD+ + + + + P VV +
Sbjct: 723 PNRDPISWTWVEEDGRVLE--HGKFVNL----ARDEAQR----DLFAELIRRRNPDVVGV 772
Query: 528 GAVNLSCTSLKDDIYEIIFK---MVEEH--PRDVGHEMDELSIVYGDESLPRLYENSRIS 582
+ L D+ II + M E+ P + D L +V ++ + RLY++S +
Sbjct: 773 SGFSADTNRLIKDVEGIISEKGLMGPEYDDPDTNEYRSDLLEVVIVNDEVARLYKDSPRA 832
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE 642
+ P + +AL RY+QNP+ A L G+++ S + P + +L ++ Y +E
Sbjct: 833 VAEHPTLNPLTRYCIALARYMQNPMKEYAAL---GKDVSSLLIHPYQQYLPQEKLYKHLE 889
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTA 702
MVD+ N G+DIN A+ + L +++GLGPRKA L + + G + +D +
Sbjct: 890 TAMVDIVNLCGVDINEAMGDPYTANLLPYVAGLGPRKAQLLIKGINANGGVVASRDELVG 949
Query: 703 HG-------LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LG +V+ N FL + S D LD+TRIHPE Y LA+++A +
Sbjct: 950 DPERHKIPVLGPRVWNNCASFLYIEHDSTNPDS----DPLDNTRIHPEDYDLARKVAADA 1005
Query: 756 YNRDIEG-DLNDDEDALEMAIEHV--RDRPDLLKTYLLDRHIKEKKRE---NKRETLYLI 809
D E DE+ + + D + + +L+ + + +RE KR TL I
Sbjct: 1006 LGLDEEDVKAETDENGPGAIVRKLFKDDEQEKVNELILEEYAVQLEREYQQRKRATLEAI 1065
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
R EL+ F++ R + P D+ F M +GET D+L + +V VR V+ AI L+ G
Sbjct: 1066 RAELMGPFEELRKNFTVPGVDQIFTMFTGETRDSLCDQMIVPVNVRIVKDDFAIVKLDCG 1125
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
+ G + E + +R S + D L G K+ + + + L RE E+R +H
Sbjct: 1126 IEGRV--ESHEVSYRHS-IKDMLQVGQTAQAKLIEVNRKDFVCKLSMREEELRRPYRRHY 1182
Query: 930 QNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPG 989
Y + +Q ++++ ++ +R+I HP F+ + +A + L G
Sbjct: 1183 D----YGRGQWDFKQEDEDREELREKDKATGRTQRVIKHPLFRPFNSTQAEEYLGGMPAG 1238
Query: 990 ESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED-TFED 1048
E +IRPSS+G +L +T KV DGVY H D++E KD++ +GK L++G T+ D
Sbjct: 1239 EVVIRPSSKGNDHLAITWKVADGVYQHIDVLELQKDNE-----FSVGKVLRVGSKYTYTD 1293
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG 1108
LDE++ ++ + ++ ++ + KF+KGS+A++++ L P R Y F + +HPG
Sbjct: 1294 LDELIVDHVKAMARKVEELMQHEKFQKGSRADLEKWLTTYIDANPNRSTYAFCLDTKHPG 1353
Query: 1109 TFILTYIRSTNPHHEYIG----LYPKGFKFRKRMFEDIDRLVAYFQ 1150
F L + S N + IG + P ++ K + D+ L F+
Sbjct: 1354 YFFLCFKASRN--SKVIGWMIRVIPHAYELMKSQYPDMRALCNGFK 1397
>gi|296804596|ref|XP_002843150.1| transcription elongation factor spt6 [Arthroderma otae CBS 113480]
gi|238845752|gb|EEQ35414.1| transcription elongation factor spt6 [Arthroderma otae CBS 113480]
Length = 1421
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 289/1177 (24%), Positives = 527/1177 (44%), Gaps = 107/1177 (9%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R E ++++ L+ + ++PFI
Sbjct: 290 EQFREEAVWISN------LMLLKKRLNSDLHEPFQRAVAK-----VLEFMVTDDWEVPFI 338
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + +K + N D L LW I + D K+ L +++
Sbjct: 339 FQHRKDYLIHAVKIPIPDGGTNPDGGKYIVEAEKLLSMIDLWDIFEYDLKFRALIDKRNT 398
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDV----------DL 189
LQ+ Y +T + ++F+ + L AA T E+ DV +L
Sbjct: 399 LQTTYDNL----------QTISNVKDKMFEEM---LPAAVTMEELQDVQDYLYFQYSTEL 445
Query: 190 K----FNLHFPPGEVGVDEGQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLS 243
K FN GE G+ +R K STK + + + + FG + +
Sbjct: 446 KDIALFNSSNNEGENGITS---QRRKASTKSFFERVRNSRAYGLVRAFGITPDAFAQNAM 502
Query: 244 LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM 303
++D E P +MA N + F ++ ++ AR M A E++ P VRK +R F
Sbjct: 503 KTGRRQYIDDATEKPGDMADNLLDSNFTNASHAMKAARTMFAEELTVSPRVRKVMRQAFY 562
Query: 304 DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTI 361
+ V+ T G ID H + K+LR++ L L ++ KAEEE L+ + +
Sbjct: 563 MSGVIECYRTEKGLKKIDEHHPYYEFKYLRDQQLSDIARRPELFLRMLKAEEEGLVDIKV 622
Query: 362 KLP--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLM 419
+ +L+ D + SD S+ A WN +R+ +L AL N L M K + M
Sbjct: 623 HFKNFKSFKERLYPDIQ----SDNFSEIADAWNKERKDVLDLAL-NKLEKIMSKGVKENM 677
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFV 476
++ + E + ++ PY+ K + PRVL+ G G K +
Sbjct: 678 RTECENHVARECREVFSQRLDQAPYKPKGMILG----TIPRVLSLTNGSGVVGKDPIYWT 733
Query: 477 MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTS 536
++ G V++ L L + K D E ++ + +P V+ + +
Sbjct: 734 WVEEDGRVLEHGKFVDLALGDSDRMIADGK--DVEAFVELVERRKPDVIGVSGQSPETRK 791
Query: 537 LKDDIYEIIFK-------MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQ 589
L + E++ ++ +V D L +V ++ + RLY+ SR + PG
Sbjct: 792 LHKQLSELVQAKDLRGAFYTDDRDEEVS---DILEVVIVNDEVARLYQTSRRAEMDHPGF 848
Query: 590 KGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ VAL +YLQNP+ A+L GR+++S + P + + D+ +E +VD+
Sbjct: 849 SPLSRYCVALAKYLQNPMKEYASL---GRDVVSIQFRPGQQLIPQDKLLKQLETALVDMV 905
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG---- 704
N VG+DIN A+ L +ISGLGPRKA+ L + + + G + +R + + +
Sbjct: 906 NLVGVDINEAVSDVSSANLLTYISGLGPRKASQLLKVINMNGGVVNSRMELLGVNAQYPA 965
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNRDIE 761
+G KV+ N FL + + D LD+TR+HPE Y + +++A E+ DI+
Sbjct: 966 MGVKVWNNCASFLYIDYDNADPDT----DYLDNTRVHPEDYDIGRKIAADALELDEEDIK 1021
Query: 762 GDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQ 818
+ +++ + D D + LL+ + ++ + KR TL IR EL ++
Sbjct: 1022 AETDENGQGAIVRKLIKEDAQDKVNDLLLEEYAEQLENNLNQRKRATLETIRAELQQPYE 1081
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
+ R Q+ D F M +GET ++LA+G +V T++R+ L+ G+ ++ + +
Sbjct: 1082 ELRKQFVFLGTDAIFTMFTGETAESLAQGMIVPITIKRISDDHIDGKLDCGIDALVPEAE 1141
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHE 938
+D + D + KI + + + + RE ++ + ++ + E
Sbjct: 1142 MTDRY-DIPIRSLYSPHQTALAKILYLNRKAFVANVSLREDQVTKPYRRQLDHMRGEWDE 1200
Query: 939 --ERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPS 996
ER+ +++ +EK + ++ + R+I HP F+ +A + L+ + G+ +IRPS
Sbjct: 1201 DQERADQEAMKEKTQTDQRVL------RVIKHPLFRPFNGRQAEEFLAPQSRGDVVIRPS 1254
Query: 997 SRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDR 1055
S+G +L +T KV DGVY H D++E K+++ +GK LKI G+ ++ DLDE++
Sbjct: 1255 SKGHDHLAVTWKVADGVYQHIDVLELDKENE-----FTVGKILKIGGKYSYSDLDELIVN 1309
Query: 1056 YIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI 1115
++ + + M+ + K+ G+K + L PTR Y F + +HPG F L +
Sbjct: 1310 HVKAMARKVDDMMVHEKYLSGTKEATEGWLTTYTTANPTRSAYAFCLDTKHPGYFHLCFK 1369
Query: 1116 RSTN-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
P + + + + P+G++ ++ + D+ L F+
Sbjct: 1370 AGLKAPLNSWPVKVIPQGYELQRTPYPDMRALCNGFK 1406
>gi|169605261|ref|XP_001796051.1| hypothetical protein SNOG_05653 [Phaeosphaeria nodorum SN15]
gi|160706735|gb|EAT86717.2| hypothetical protein SNOG_05653 [Phaeosphaeria nodorum SN15]
Length = 1412
Score = 293 bits (750), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 276/1097 (25%), Positives = 501/1097 (45%), Gaps = 97/1097 (8%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT------LKW 116
+ + L+ L+++ ++PFI +RK+ + D +D+ DD P L
Sbjct: 311 VHKVLEFLNIEDYEVPFIFNHRKDYLIHAPGD-------SDDQDDANLPPVNVRPERLLN 363
Query: 117 HKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLE 176
LW + DLD K+ +++ AL+ Y + R +Y E ++ ++ D +K++
Sbjct: 364 QSDLWEVFDLDLKFRAFAEKRDALRLNY-----DNIRSVYPEI---IDTEIEDLSNKAIT 415
Query: 177 AAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
E + D + +++ + Q + + Y ++ G ++E
Sbjct: 416 IEEIQELQDYLHYRYSTEISEVRQETNGVQKRANNARSFYDKLRSGKAHQLVKAIGITAE 475
Query: 237 QLGLQLSLEKMGDEL-EDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR 295
G ++ EDP +E A A + +L+ A+ + +++ +R
Sbjct: 476 DFAKAAEGTSRGAQIIEDPPFQVQEYADQLAEAP-ETGTTLLRSAKILFVQDLNMSSRLR 534
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEE 353
+++R F NA + T G I H + K+LR + L ++ KAE
Sbjct: 535 RFLRGSFYQNAQIDCIRTDKGARKITEDHPYYEFKYLRRQTFMDLHGRPDLFLKMLKAES 594
Query: 354 EKLLQVTIKLPEDSLNKLFSDCKEHY----LSDGVSKSAQLWNDQRELILKDALDNF--L 407
E L+QV I + ++D K+ +SD VS+ + WN+ R +L +ALD +
Sbjct: 595 EGLVQVQISMSN------YTDFKKRLQGKIVSDNVSEVSDSWNNLRRELLDEALDKLQKV 648
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
+ + VKE+ + R + L ++ +N++ PY+ K + + P L G
Sbjct: 649 IAAGVKES---LRARCEDELASRARESYYNRLDQAPYKLKAAPLG----SVPNALCMSNG 701
Query: 468 PGK--PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
G+ + +++ G V++ + R N + D + ++ +P V+
Sbjct: 702 QGQRGDAIMWAYVENDGRVLE--HGKFVDFRLGNQERGIADGQDIAKFVEAAQRRRPDVI 759
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHP----RDVGHEM-DELSIVYGDESLPRLYENSR 580
+ ++ L D+ EII + P + G E D L +V ++ + RLY NS
Sbjct: 760 GISGWSVETRKLYKDVQEIIQQNGLTGPTYEDENSGQERSDPLEVVLVNDEVARLYYNSG 819
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
++ + P V+ ++L RYLQNPLA A+L G++I+S P + + ++ +
Sbjct: 820 RAAAEFPKYAPLVRYCISLARYLQNPLAEYASL---GKDIISIPFIPNQTLIPQEKLFDR 876
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG-AIFTRKDF 699
+E MVD+ N VG+D+ + ++ L ++ GLGPRKA L +++ G I +R D
Sbjct: 877 LETAMVDMVNLVGIDLPESYDDKYLGKLLPYVCGLGPRKADRLVKAIQANGDEILSRYDL 936
Query: 700 VTAH---------GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQE 750
+ +G KV N FL + SS D LD TR+HPE Y LA++
Sbjct: 937 LGVSENSSRDLKAAMGPKVHQNCASFLYIPYDATEESS----DYLDYTRVHPEDYDLARK 992
Query: 751 LAKEVYNRDIEGDLNDDEDALEMAI--EHVRDRP-DLLKTYLLDRHIKEKKR---ENKRE 804
+ + N D E + ++ A+ + VR+ DL+ L+ + E +R + KR
Sbjct: 993 MVADALNMDEEDVKAETDEGGPSAVIRKMVREETTDLVNDLALEDYAIEIQRNFGQRKRA 1052
Query: 805 TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAIC 864
TL IR EL + +++ R + S DE F M++GET++TL E VV T++R C
Sbjct: 1053 TLETIRAELENPYEEIRQTFALMSSDEIFTMLTGETKETLYEHMVVPVTIKRTFPDHIEC 1112
Query: 865 VLESGLAGMLMKEDYSD-------DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
LE G+ G + + ++ + + R S ++ G I+ IK++ L R
Sbjct: 1113 RLECGIEGGVSESEFPEGVGNGGQEPRHVYQSHQVVRGRIMFLNIKALTAQ-----LSLR 1167
Query: 918 ESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTAD 977
E +R + Q + + + ++++ A KEKE+A R++ HP F + +
Sbjct: 1168 EDIIRKPQPQPDRIPGEW---DDLQEAADKKAAEKEKEVASGR-PNRVVNHPLFFSFNSI 1223
Query: 978 EAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGK 1037
+A + L +KE GE +IRPSS+G +L +T KV + Y H D++E K ++ +GK
Sbjct: 1224 QAEEYLGSKEVGELVIRPSSKGFDHLVVTWKVGNNAYQHLDVLEMNKPNQ-----FTLGK 1278
Query: 1038 TLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIV 1097
LKIG+ T+ DLDE++ +I+ + + + +F+ G+K E ++ L P R +
Sbjct: 1279 QLKIGKTTYTDLDELIVNHIEAMARKVSELTRDERFKTGTKEETEQWLENYCTANPNRSM 1338
Query: 1098 YGFGISHEHPGTFILTY 1114
Y F ++PG F L +
Sbjct: 1339 YAFCSMPKYPGHFWLCF 1355
>gi|46136777|ref|XP_390080.1| hypothetical protein FG09904.1 [Gibberella zeae PH-1]
gi|116256793|sp|Q4HYQ4.1|SPT6_GIBZE RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Chromatin elongation factor SPT6
Length = 1408
Score = 293 bits (749), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 293/1179 (24%), Positives = 525/1179 (44%), Gaps = 105/1179 (8%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDL-SISRDDIMRFLD 68
RK E +E+ WI NQL + ++G S DL S + + L+
Sbjct: 284 RKTFKSLQLTAEQFKEEARWITNQL-------WPKKGLAS-----DLQSPFGKAVGKVLE 331
Query: 69 LLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDK 128
+ ++++P++ +RK+ L K N + D + L LW I +LD
Sbjct: 332 FFIVDEVEVPYVFQHRKDYLLHTRKTRNPNRDDPDAPEYVISADKLLNQDDLWKILELDI 391
Query: 129 KWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD 188
K+ +++AL+ + + + + ++ + D + + A T E+ D
Sbjct: 392 KFRSFVDKRNALE-----------KTVDNLKGMEIHDAMVDEM---IPEATTMEELQD-- 435
Query: 189 LKFNLHFPPGEVGVDEGQY-------KRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGL 240
L+ LHF G+ D KRP +S + + +G S++QL
Sbjct: 436 LQDYLHFQYGQQLKDLAALAGNLSLTKRPGSKSNLLERVRQGKAYGFVRAYGISADQLAK 495
Query: 241 QLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+D + P ++A + +F++ V+ AR M + E+ P +RK+ R+
Sbjct: 496 NALRHGKKVTPDDDAQYPMDLADSLIDDVFSTGDQVISAARQMYSEELFASPRMRKHFRN 555
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQ 358
+ A +S T G ID H + +K+L+ + + + +L + KAEEE L
Sbjct: 556 SYYQAAEISCRRTEKGLRRIDDSHPYYEIKYLQNQAIADLVHQPELFLKMMKAEEEGL-- 613
Query: 359 VTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDA---LDNFLLPSMVKEA 415
VTIKL + + + S+ S A+ W ++R+ +L A L+ + ++ +
Sbjct: 614 VTIKLDMPARYDFRQHLYQEFESENFSDRAEQWREERKKVLDLAYPKLEKIIAKNVKEVI 673
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PGKPE 472
R+ EY K ++ PY+ K + PRVL G P +
Sbjct: 674 RTFCQDEVLKMCREEYAK----RLDQAPYKPKGMILG----TTPRVLVLSNGMSDPARDP 725
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
+ ++ G V++ G L RD++ + E + + +P V+ + +
Sbjct: 726 ICWAWVEEDGRVIEQGKLGNLA------RDERQR----EEFEELVKRRRPDVIGVSGWSA 775
Query: 533 SCTSLKDDIYEIIFKM-----VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
T L D+ ++ + E P + + L +V ++ + RLY++S + + P
Sbjct: 776 ETTKLVRDLEGLVNEKGLMGPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRALAEHP 835
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ VAL RY+QNP+ A L G+++ S P +N L D+ ++ MVD
Sbjct: 836 SLNPITRYCVALARYMQNPMKEYAAL---GKDVSSLSYHPCQNLLPADKLAKYLDSAMVD 892
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLG 706
+ N G+DIN A++ + L ++SGLGPRKA S+ +++ GA+ TR + V G
Sbjct: 893 MVNLCGVDINEAMNDTYTANLLPYVSGLGPRKATSVIKAINANGGAVGTRDELVGDPDSG 952
Query: 707 K------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYN 757
K +V+ N FL + SS D LD+TR+HPE Y L +++A E+
Sbjct: 953 KLPVVGPRVWNNCASFLFIEYEATNPSS----DPLDNTRVHPEDYELGRKMAADALELDE 1008
Query: 758 RDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIRRELI 814
D++G+ +++ + D D + +L+ + ++ +R + KR TL IR EL
Sbjct: 1009 EDVKGETDENGPGAIVRKLFKMDEQDKVNELVLEEYAEQLERNYSQRKRATLETIRAELQ 1068
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+++ R + S E F M +GET+ TL EG +V VR V+ AI L+ G+ G +
Sbjct: 1069 APYEELRRNFALLSASEIFTMFTGETKHTLCEGMIVPVNVRVVKDDFAIVKLDCGIEGRV 1128
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
+ S S + + L G KI I + L RE +R Y+ NL
Sbjct: 1129 EGHEVS---HRSSIKEVLSSGQTSQAKILDINYKDFMAKLSMREDALRIP-YKRPINLGR 1184
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ ++E K+K + +R++ HP F+ +A + L ++ GE +IR
Sbjct: 1185 DGWDYVLEAADKEELREKDKTTGR---TQRVVKHPNFKPFNGLQAEEYLGSQPNGEVVIR 1241
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVV 1053
PSS+G +L +T KV DGV+ H D++E K+ + +GK L++ G+ T+ DLDE++
Sbjct: 1242 PSSKGNDHLAVTWKVADGVFQHIDVLEMQKETE-----FAVGKLLRVGGKYTYTDLDELI 1296
Query: 1054 DRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILT 1113
++ + ++ ++ + K++ S+ E ++ L P R Y F I +HPG F L
Sbjct: 1297 VEHVKAMARKVEELMRHDKYQNRSRGETEKWLTTYIDANPNRSTYAFCIDTKHPGYFWLC 1356
Query: 1114 Y--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ R+ + P+GF+ + + D+ L F+
Sbjct: 1357 FKASRAAKVIALPVRAIPQGFELKGYQYPDMRALCNGFK 1395
>gi|115948362|ref|XP_780452.2| PREDICTED: transcription elongation factor SPT6-like, partial
[Strongylocentrotus purpuratus]
Length = 913
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 346/685 (50%), Gaps = 38/685 (5%)
Query: 202 VDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEM 261
V + K+ R + Y+ C A L +A+KFG + EQ G L + E +++P E+
Sbjct: 207 VTSNEIKQASRKSMYALCQDAKLTGLAAKFGLTPEQFGENLRDNYQRHDPEQHQDSPLEV 266
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
A+++ + F + VLQ AR+M A++I+ +P VR+ VR + + A +S PT G ID
Sbjct: 267 ATDYLSSKFKDEEGVLQAARYMVALQIAHDPLVRQCVRQTYYERAKISVRPTKKGIKEID 326
Query: 322 SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-------PEDSLNKLFSD 374
H G K+L+ K ++ Q+L + +AE++KL+ +T+ + + F +
Sbjct: 327 ESHPIFGSKYLKNKQVKDLLQDQYLKLVQAEKDKLITMTMSIDMAQGTSTSYTSTTYFEE 386
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
K+ Y D Q WN +R L+ AL + L P + KE ++ + AK ++ +
Sbjct: 387 MKQLYYLDEFRTEVQAWNKERSGALEMALQSILYPQLAKELKTKLVAEAKEGIIKQCCTK 446
Query: 435 LWNKVSVGPYQRKDNDITPDEE--------AAPRVLACCWGPGKPETTF-VMLDSSGEVV 485
++N + V P+Q D + DE+ RV+ + F MLDS GEV
Sbjct: 447 MFNSLKVMPHQ-VDQPMEEDEDDYMDGNSRMGLRVMGFSFTSDMDNAAFCCMLDSEGEVT 505
Query: 486 DVLFTGCLTLRSQNV---RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIY 542
D L LR +N RD+ K+ D E L F+ +PHV+ L + + TS+ DI
Sbjct: 506 DFLRLPHF-LRRRNAFYQRDRDLKQADVESLKNFISTQKPHVLALASEGKNTTSVLQDIK 564
Query: 543 EIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRY 602
I + E +M + + D ++ +Y+ S++ + ++ AV++ R
Sbjct: 565 GCIEDLESE------QQMAPIKVQLIDSNVAAVYQASKLVETEFRDYPPLLREAVSIARR 618
Query: 603 LQNPLAMVATLCGPGREILSWKLCPLENFLTPDE-KYGMIEQVMVDVTNQVGLDINLAIH 661
LQ+PL + LC P +IL KL P ++ ++ +E K M ++ + V N+VG+DIN AI
Sbjct: 619 LQDPLIEFSRLCNPDDDILCLKLHPQQDAVSQEELKEAMFQEFIYRV-NEVGVDINRAIT 677
Query: 662 REWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRV- 719
+ +QF+ GLGPRK SL R+L + + R VT LG KVF+N GFL++
Sbjct: 678 HPHTASIVQFVCGLGPRKGNSLVRTLKQKNQRLDNRNQLVTHCQLGPKVFINCAGFLKID 737
Query: 720 RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVR 779
S + +I++LD TRIHPE+Y A+++A + D + DD + E A+E +
Sbjct: 738 TASAGDGADDTYIEVLDSTRIHPETYEWARKMAVDALEYD---EAADDANPAE-ALEEIL 793
Query: 780 DRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMI 836
+ PD LK LD +E +R+ N+ TLY IR EL ++D R + + +E F ++
Sbjct: 794 ENPDKLKDLDLDAFAEELERQGYGNRSITLYDIRAELNSRYKDLRTPFHPFTPEEAFSIL 853
Query: 837 SGETEDTLAEGRVVQATVRRVQGQR 861
+ ET +T G++V V + +R
Sbjct: 854 TKETPETFYRGKMVTCKVTGIARRR 878
>gi|322709069|gb|EFZ00646.1| Transcription elongation factor spt-6 [Metarhizium anisopliae ARSEF
23]
Length = 1417
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 291/1188 (24%), Positives = 528/1188 (44%), Gaps = 123/1188 (10%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---DDIMRF 66
RKA E +E+ WI NQL PK+G + + +
Sbjct: 293 RKAFKNLQLTAEQFKEEAKWITNQLW--------------PKKGLTQELQTPFAKAVGKV 338
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+ + ++++P++ +RK+ L K + + D D ++ L LW I +L
Sbjct: 339 LEFFIVDEVEVPYVFQHRKDYLLHSKKIRKSARDDLDGPDYTIQSDKLLNQDDLWRILEL 398
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D K+ ++++L+ Y+ +S + D I + + A T E+ D
Sbjct: 399 DIKFRSFVDKRNSLEKTYENL---KSLDVEDPM-----------IEEMIPEATTMEELQD 444
Query: 187 VD--LKFNLHFPPGEVGVDEG---QYKRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGL 240
+ L+F ++ V G Q KRP +S + +G S++QL
Sbjct: 445 LQDYLQFQYGAKLRDLAVMAGNHSQSKRPGSKSALLDRVRNGKAYYFVKAYGVSADQLAK 504
Query: 241 QLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+ +D + P ++A + F++ V+ AR M + E+ P +RKY RS
Sbjct: 505 NALRQGKKITPDDDSQYPMDLADSLIDDNFSTGDQVISAARQMYSEELFASPRMRKYFRS 564
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQ 358
+ A +S T G ID H + +K+L+ + + +L + +AEEE L+
Sbjct: 565 SYYQAAELSCRRTDKGLRKIDDSHPYYEIKYLQNQAIADLVHRPELFLKMMRAEEEGLVD 624
Query: 359 VTIKLPE--DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEAR 416
+ + +P D +L+ + + S+ S A+ W ++R+ +L A L +VK +
Sbjct: 625 IKVDMPPRYDFRRQLY----QEFESENFSDRAEQWREERKKVLDMAYPK-LEKVIVKNVK 679
Query: 417 SLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE---T 473
++ + +L + + K+ PY+ K + PRVLA G G P T
Sbjct: 680 EVIRTFCQDEVLKMCRQEFYRKLDQAPYKPKGMILG----TTPRVLALSNGMGDPTREPT 735
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+ ++ G V++ G L RD+ + E + +P V+ + +
Sbjct: 736 CWTWVEEDGRVLEQGKFGNLA------RDEAQR----EEFAALVRRRRPDVIAVSGWSAE 785
Query: 534 CTSLKDDIYEII----FKMVE-EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPG 588
+ L DI ++ + E + P + + L +V D+ + RLY++S + + P
Sbjct: 786 TSKLVRDIEALVSDKDLRGAEFDDPETNDYRTEPLEVVVVDDEVARLYKDSPRAVAEHPS 845
Query: 589 QKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDV 648
+ + L RY+QNP+ A L G+++ S P ++ L D+ ++ MVD
Sbjct: 846 LNPVTRYCIGLARYMQNPMKEYAAL---GKDVSSLSFHPCQHLLPQDKLAKYLDSAMVDT 902
Query: 649 TNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLGK 707
N VG++IN A+ + L +I+GLGPRKA S+ +++ G++ TR + V GK
Sbjct: 903 VNMVGVNINDAMTDTYTANLLPYIAGLGPRKATSVIKAINANGGSVNTRDELVGDPDSGK 962
Query: 708 ------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNR 758
+V+ N FL + + S+++ D LD+TR+HPE Y L +++A E+
Sbjct: 963 LPVVGPRVWNNCASFLYI----EFDSTNEITDPLDNTRVHPEDYELGRKMAADALELDEE 1018
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKE---KKRENKRETLYLIRRELIH 815
D++ + +++ + +D + + +LD + + + KR TL I EL
Sbjct: 1019 DVKAETDENGPGAIVRKLFKQDEQERVNELVLDEYADQLLTNFNQRKRATLEAISAELQA 1078
Query: 816 GFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLM 875
+++ R + +Q E F M +GET+ +L EG +V VR V+ AI L+ G+ G +
Sbjct: 1079 PYEELRRSFAPLNQSEIFTMFTGETKSSLCEGMIVPVNVRMVRDDFAIVKLDCGIEGRVE 1138
Query: 876 KEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQ----- 930
+ + + + + L G KI + + L RE +R +
Sbjct: 1139 AHEVTSR---ASVKEVLSTGQTAQAKILELNYKDFMAKLSMREDALRVPFKRPINYGRDG 1195
Query: 931 ---NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKE 987
NL+ EE R+ +Q R + R++ HP F+ + +A + L ++
Sbjct: 1196 WDYNLEATDKEE--LREKDQSTGRTQ----------RVVKHPNFKPFNSIQAEEYLGSQP 1243
Query: 988 PGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTF 1046
PGE IIRPSS+G +L +T KV D VY H D++E KD + +GK L+I G+ T+
Sbjct: 1244 PGEVIIRPSSKGNDHLAITWKVADNVYQHIDVLEMQKDTE-----FSVGKLLRIGGKYTY 1298
Query: 1047 EDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEH 1106
DLDE++ ++ + ++ ++ + K++ S++E ++ L P R Y F I +H
Sbjct: 1299 SDLDELIVDHVKAMARKVEELMRHDKYQSRSRSETEKWLTTYIDANPNRSAYAFCIDQKH 1358
Query: 1107 PGTFILTYIRSTNPHHEYIGL----YPKGFKFRKRMFEDIDRLVAYFQ 1150
PG F L + S IGL P+G++ + + D+ L F+
Sbjct: 1359 PGYFWLCFKASRTAR--VIGLPVRAIPQGYELKGYQYPDMRALCNGFK 1404
>gi|440463392|gb|ELQ32974.1| transcription elongation factor SPT6 [Magnaporthe oryzae Y34]
gi|440484488|gb|ELQ64551.1| transcription elongation factor SPT6 [Magnaporthe oryzae P131]
Length = 2459
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 262/1071 (24%), Positives = 481/1071 (44%), Gaps = 101/1071 (9%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I DLD K+ ++++ L Y+ + + +FD + + AE
Sbjct: 378 LWRIVDLDLKFRSFVEKRNILDKSYQ-----------NLKTAGIQDDVFDEM---VYRAE 423
Query: 180 TEREVDDVDLKFNLHFPP-----GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
T E+ DV + H+ G +G + K + + + ++ +G +
Sbjct: 424 TIEELQDVQDYMHFHYSSQMKDLAAAGAIKGVKRVAKSTGVFERVRNSTVYNFVKAYGIT 483
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
++L E ED + P ++A + + F+++ V++ AR M A E+ P +
Sbjct: 484 PDKLAQNALREGKKTSAEDNSKMPLDLADSLTDSYFDTADHVIKAARSMFAEELFLNPRM 543
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPL----RKFEDAQWLLIQK 350
R++ + + + +V T G ID H F +K+L + + R+ E +L + K
Sbjct: 544 RRHFKVAYYNMGIVDCRRTEKGLRKIDESHPFYEIKYLINQTIGDLARRPE--IFLKMMK 601
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LL 408
AEEE L++V + L + + + + S+ S+ A WN++R+ L A ++
Sbjct: 602 AEEEGLVEVKLTLQNE--REFRKNLLSEFQSENFSERADAWNEERKKALDLAFPKLEKII 659
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
VKE+ + + LL + +V P++ K + PR L G
Sbjct: 660 TKGVKES---LRTACQDELLKICREEFSKRVDQAPFRPKGFMLG----MTPRCLVISNGM 712
Query: 469 GKPETTFV--MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
P + L G++V+ G L RD+ ++ ++ + + +P V+
Sbjct: 713 ADPNRDLLCWALVDDGKLVEQGKFGSLG------RDEAARTAFEDVVER----ARPDVIG 762
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE----------LSIVYGDESLPRLY 576
+ + L D+ +I +G+E D+ L +V ++ RLY
Sbjct: 763 VSGWSADTQRLVKDLETLI-----SEKGLMGNEFDDPDTDEVRTELLEVVVVNDETARLY 817
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDE 636
++S P + V L RY+QNPL C G++ S + P +N L P +
Sbjct: 818 KDSARGVSDYPNLNPVTRYCVGLARYMQNPLK---EYCLLGKDNTSLAIHPCQNLLPPAK 874
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFT 695
+E V+VD+ N G+DIN AI + A L +++GLGPRKA ++ +++ G + T
Sbjct: 875 LLRTMETVLVDIVNLCGVDINDAISDPREAALLPYVAGLGPRKATAVLKAINANGGVVNT 934
Query: 696 RKDFV------TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQ 749
R + V +G +V+ N F + + D LD TRIHP Y LA+
Sbjct: 935 RDELVGDPDSGKLQVVGPRVWNNCASFFIISYEHATPEA----DPLDATRIHPMDYELAR 990
Query: 750 ELAKEVYNRDIEGDLND--DEDALEMAIEHV--RDRPDLLKTYLLDRHIKEKKREN--KR 803
++A + + D E D+ DE + + +R + L ++ + ++ +R+ K+
Sbjct: 991 KMAADALDMD-EEDIKAEVDEGGPPAVVRRLFKENRQETLYDLSMEDYAEQLERQGLLKK 1049
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAI 863
TLY IR E +++ R+ + + + D+ F M +GET+D+L E +V VR V+ AI
Sbjct: 1050 ATLYAIRGEFQSPYEELRHSFVQLTADQIFTMFTGETKDSLCEQMIVPVNVRVVKEDFAI 1109
Query: 864 CVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN 923
L+ G+ G + + S E+ L G K+ + + + + RE +R
Sbjct: 1110 VKLDCGIEGRIEAHEVSSRHTPREI---LQTGQTTRAKVLELNRKDFMCKMSVREDALRY 1166
Query: 924 N-RYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
R H + D + RQ E++ A ++ +R+I HP F++ + EA +
Sbjct: 1167 PYRKMHDHDRDNW-----DFRQEEKDAADLTEKDVVTGRAQRVIKHPMFKSFNSTEAEQY 1221
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L ++ PGE +IR SS+G +L +T KV DGV H D++E K+++ +G+TLK+
Sbjct: 1222 LGSQPPGELVIRSSSKGSDHLAITWKVADGVIQHIDVLELDKENE-----FALGRTLKVA 1276
Query: 1043 ED-TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFG 1101
T+ DLDE++ ++ + + ++ KF+KGS+++++ L PTR Y F
Sbjct: 1277 NKYTYSDLDELIVEHVKAMARKVDELMQSDKFQKGSRSDLERWLTTYMDANPTRSTYAFC 1336
Query: 1102 ISHEHPGTFILTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ +HPG F+L + RS+ + + P ++ + D+ L F+
Sbjct: 1337 LDTKHPGYFVLCFKASRSSKIGSWSVRVIPGAYEMMGSQYPDVRALCNGFK 1387
>gi|322699964|gb|EFY91722.1| Transcription elongation factor spt-6 [Metarhizium acridum CQMa 102]
Length = 1417
Score = 290 bits (742), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 290/1183 (24%), Positives = 530/1183 (44%), Gaps = 113/1183 (9%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISR---DDIMRF 66
RKA E +E+ WI NQL PK+G + + +
Sbjct: 293 RKAFKNLQLTAEQFKEEAKWITNQLW--------------PKKGLTQELQTPFAKAVGKV 338
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+ + ++++P++ +RK+ L K + + D D ++ L LW I +L
Sbjct: 339 LEFFIVDEVEVPYVFQHRKDYLLHSKKIRKSARDDLDGPDYTIQSDKLLNQDDLWRILEL 398
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D K+ ++++L+ Y + + D L + + + A T E+ D
Sbjct: 399 DIKFRSFVDKRNSLEKTYG------NLKSLDVEDLM--------VEEMIPEATTMEELQD 444
Query: 187 VD--LKFNLHFPPGEVGVDEGQYKRPKRSTKYSS----CSKAGLWEVASKFGYSSEQLGL 240
+ L+F ++ V G + + KR SS + +G S++QL
Sbjct: 445 LQDYLQFQYGAKLRDLAVMAGNHSQSKRPGSKSSLLDRVRNGKAYYFVKAYGVSADQLAK 504
Query: 241 QLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+ +D + P ++A + F++ V+ AR M + E+ P +RKY RS
Sbjct: 505 NALRQGKKITPDDDSQYPMDLADSLIDDNFSTGDQVISAARQMYSEELFASPRMRKYFRS 564
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQ 358
+ A +S T G ID H + +K+L+ + + +L + +AEEE L+
Sbjct: 565 SYYQAAELSCRRTDKGLRKIDESHPYYEIKYLQNQAIADLVHRPELFLKMMRAEEEGLVD 624
Query: 359 VTIKLPE--DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEAR 416
+ + +P D +L+ + + S+ S A+ W ++R+ +L A L +VK +
Sbjct: 625 IKVDMPPRYDFRRQLY----QEFESENFSDRAEQWREERKKVLDMAYPK-LEKVIVKNVK 679
Query: 417 SLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE---T 473
++ + +L + + K+ PY+ K + PRVLA G G P T
Sbjct: 680 EVIRTFCQDEVLKMCRQEFYRKLDQAPYKPKGMILG----TTPRVLALSNGMGDPAREPT 735
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+ ++ G V++ G L RD+ + E + +P V+ + +
Sbjct: 736 CWTWVEEDGRVLEQGKFGNLA------RDEAQR----EEFAALVRRRRPDVIAVSGWSAE 785
Query: 534 CTSLKDDIYEII----FKMVE-EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPG 588
+ L D+ ++ + E + P + + L +V D+ + RLY++S + + P
Sbjct: 786 TSKLVRDVEALVSDKDLRGAEFDDPETNDYRTEPLEVVVVDDEVARLYKDSPRAVAEHPS 845
Query: 589 QKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDV 648
+ V L RY+QNP+ A L G+++ S P ++ L D+ ++ MVD
Sbjct: 846 LNPVTRYCVGLARYMQNPMKEYAAL---GKDVSSLSFHPCQHLLPQDKLAKYLDSAMVDT 902
Query: 649 TNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLGK 707
N VG++IN A+ + L +I+GLGPRKA S+ +++ G + TR + V GK
Sbjct: 903 VNMVGVNINDAMTDPYTANLLPYIAGLGPRKATSVIKAINANGGFVNTRDELVGDPDSGK 962
Query: 708 ------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNR 758
+V+ N FL + + S+++ D LD+TR+HPE Y L +++A E+
Sbjct: 963 LPVVGPRVWNNCASFLYI----EFDSTNEITDPLDNTRVHPEDYELGRKMAADALELDEE 1018
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKE---KKRENKRETLYLIRRELIH 815
D++ + +++ + +D + + +LD + + + KR TL I EL
Sbjct: 1019 DVKAETDENGPGAIVRKLFKQDEQERVNELVLDEYADQLLTNFNQRKRATLEAISAELQA 1078
Query: 816 GFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLM 875
+++ R + SQ E F M +GET+ +L EG +V VR V+ AI L+ G+ G +
Sbjct: 1079 PYEELRRSFAPLSQSEIFTMFTGETKSSLCEGMIVPVNVRMVRDDFAIVKLDCGIEGRVE 1138
Query: 876 KEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNL--D 933
+ + + + + L G KI + + L RE +R ++ N D
Sbjct: 1139 AHEVTSR---ASVKEVLSTGQTAQAKILELNYKDFMAKLSMREDALRVP-FKRPINYGRD 1194
Query: 934 PY-YHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
+ Y+ E S ++ +EK + +R++ HP F+ + +A + L ++ PGE I
Sbjct: 1195 GWDYNLEASDKEELREKDQSTGR------TQRVVKHPNFKPFNSIQAEEYLGSQPPGEVI 1248
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDE 1051
IRPSS+G +L +T KV D VY H D++E KD + +GK L+I G+ T+ DLDE
Sbjct: 1249 IRPSSKGNDHLAITWKVADNVYQHIDVLEMQKDTE-----FSVGKLLRIGGKYTYSDLDE 1303
Query: 1052 VVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFI 1111
++ ++ + ++ ++ + K++ S++E ++ L P R Y F I +HPG F
Sbjct: 1304 LIVDHVKAMARKVEELMRHDKYQSRSRSETEKWLTTYIDANPNRSAYAFCIDQKHPGYFW 1363
Query: 1112 LTYIRSTNPHHEYIGL----YPKGFKFRKRMFEDIDRLVAYFQ 1150
L + S IGL P+G++ + + D+ L F+
Sbjct: 1364 LCFKASRTAR--VIGLPVRAIPQGYELKGYQYPDMRALCNGFK 1404
>gi|258573739|ref|XP_002541051.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901317|gb|EEP75718.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1406
Score = 289 bits (740), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 290/1111 (26%), Positives = 499/1111 (44%), Gaps = 124/1111 (11%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSIS---RDDIMRFLDLLHLQKLDI 77
E +E+ WI N +L PK+ D S+ + I++ L+ + ++
Sbjct: 298 EQFKEEALWISNLML--------------PKKRLDPSLKEPFQKSIVKVLEFMVTDDWEV 343
Query: 78 PFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
PFI +RK+ + K + + N D D R L LW I + D K+ L +
Sbjct: 344 PFIFQHRKDYLIHAAKVPVSPDPSNPDGQDYVIRAEKLLNMTDLWDIFEYDLKFRALVDK 403
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALN--QQLFDSISKSLEAAETEREVDDVDLKFNLH 194
++ LQ R YD R N ++F+ + L AA T E+ D+
Sbjct: 404 RNVLQ------------RTYDNLRSISNVKDEVFEQM---LPAAVTMEELQDIQDYLYFQ 448
Query: 195 FPP-----------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS 243
+ GE GV Q ++ T + + + + FG +
Sbjct: 449 YSAELKDVAMVNGSGENGV-VSQRRKAATKTFFERIRNSKAYGLVRAFGITPNGFAQNAM 507
Query: 244 LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM 303
E ++DP E PE+MA N F + L+ ++ M A E++ P VRK +R F
Sbjct: 508 KEAKRHHIDDPTELPEDMADNLLDTSFANGLHALKASKAMFAEELTMSPKVRKCLRQAFY 567
Query: 304 DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTI 361
N V+ T G ID H + K+LR + L L ++ KAEEE L++V +
Sbjct: 568 MNGVIDCFRTEKGLKKIDEHHPYYEFKYLRNQQLSDIARRPELFLRMLKAEEEGLVEVKV 627
Query: 362 KLP--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLM 419
+ ++ +L+ D + SD S+ A WN R+ +L A+ L M + + +
Sbjct: 628 RFQNFDNYKKRLYGDIQ----SDNFSEVADAWNKARKEVLDMAIGR-LEKIMSRGVKENI 682
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFV 476
++ + E +A ++ PY+ K + PRVL G G K +
Sbjct: 683 KTECENHVAKECREAFSLRLDQAPYKPKGMVLG----TIPRVLTLSSGTGTIGKDPIYWA 738
Query: 477 MLDSSGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCT 535
++ G V++ G + D+ + D + ++ + +P V+ + ++
Sbjct: 739 WVEEDGRVLE---NGKFVDLALGDPDRMIADGRDVDNFMELIERRKPDVIGISGMSPETR 795
Query: 536 SLKDDIYEII-FKMVEEHP--RDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQKG 591
L + E+I K + P D E+ D L +V ++ + RLY S + + PG
Sbjct: 796 KLYKQLTELIDAKNLRSSPYTNDNDEEVSDLLEVVIVNDEVARLYHTSDKARSEHPGLSQ 855
Query: 592 NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ 651
V+L +YLQNP+ A+L GR+I+S + P + ++ D+ +E +VD+ N
Sbjct: 856 LTVYCVSLAKYLQNPMKEYASL---GRDIVSIQFKPGQQLISQDKLLKQLESALVDMVNL 912
Query: 652 VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG----LG 706
G+DIN A++ L ++ GLGPRKA+ L + + + G + R + + + +G
Sbjct: 913 CGVDINEAVNDPSTANLLTYVCGLGPRKASQLLKIINMNGGVVNNRMELLGVNAQYPAMG 972
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND 766
KV+ N FL V +S D LD+TR+HPE Y + +++A + D E D+
Sbjct: 973 VKVWNNCASFLYV----DYDTSDPDTDYLDNTRVHPEDYDIGRKMAADALELD-EEDIKA 1027
Query: 767 DED-----------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIH 815
+ D E A E V D +L+ Y +++ + KR TL IR EL
Sbjct: 1028 ETDENGPGAIVRKLIKEDAQEKVNDL--ILEEYA--EQLEKNLNQRKRATLETIRAELQQ 1083
Query: 816 GFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLM 875
+++ R Q+ S D F M++GET DTLAEG VV T++R+ L+ G+ ++
Sbjct: 1084 PYEELRKQFVFLSTDAIFTMLTGETPDTLAEGMVVPITIKRITDDHIDGKLDCGVDVLIP 1143
Query: 876 KEDYSDDWRDSELSDKLHEGDILTCKIKSI-QKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
+ + +D + DI + SI Q ++ + R++ + N + Q P
Sbjct: 1144 EMELTDRY------------DIPVRTLYSIHQTIPAKLLYLNRKAFIANASLREDQVNKP 1191
Query: 935 YYHEERSSR-----QSEQEKARKEKELAKKHFKE-RLIVHPCFQNVTADEAMKLLSAKEP 988
Y E R E++ KE AK + + R+I HP F+ +A + L+++
Sbjct: 1192 YRREFDHMRDEWDDNQERQDQDAMKEKAKTNTRALRVIKHPLFRPFNGPQAEEFLASQSR 1251
Query: 989 GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFE 1047
G+++IRPSS+GP +L +T KV D VY H D++E K+++ +GK LKI G+ ++
Sbjct: 1252 GDAVIRPSSKGPDHLAVTWKVSDRVYQHIDVLELDKENE-----FSVGKILKIGGKYSYT 1306
Query: 1048 DLDEVVDRYIDPLVSHLKAMLSYRKFRKGSK 1078
DLDE++ ++ + + M+ + K++ GSK
Sbjct: 1307 DLDELIVNHVKAMARKVDDMMIHEKYQSGSK 1337
>gi|398409190|ref|XP_003856060.1| transcription elongation factor SPT6 [Zymoseptoria tritici IPO323]
gi|339475945|gb|EGP91036.1| transcription elongation factor SPT6 [Zymoseptoria tritici IPO323]
Length = 1520
Score = 289 bits (740), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 273/1126 (24%), Positives = 497/1126 (44%), Gaps = 86/1126 (7%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
+ + L +++ + + FI RK+ L E + NN N + + L LW
Sbjct: 430 VKQVLHFMNVDEYEPAFIFQNRKD----YLIHSEPVDPNNPNGAELKAEKLLN-QTDLWD 484
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
+ + D K+ +R+ ++Q S + E + +FD + + A T
Sbjct: 485 VFEQDLKYRAFAERRESIQR---------SIELIKELEPDFDDAIFDDL---IPLAATMD 532
Query: 183 EVDDVDLKFNLHFPP-------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSS 235
++ D+ N + + V+ Q + + + + + FG ++
Sbjct: 533 DLQDLQEYLNFQYSTQLKDLSISDAAVNGTQKRAVGARSAWDKVRAGPAYHMVRAFGITA 592
Query: 236 EQLGLQLSLEKMGDELEDPKETPEEMASNF-KCAMFNSSQAVLQGARHMAAVEISCEPCV 294
+ + ED + PE++A + + + + V+ A+ M A EI+ P +
Sbjct: 593 DAIAQNAEKTSRRTYTEDTDKLPEDLADTLVRDPDYKTGEEVMSRAKAMFAEEIAMSPRM 652
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF---EDAQWLLIQKA 351
R+++R I+ N V T G I+ H + K+LR + +R F + +L + KA
Sbjct: 653 RRHMRIIYYKNLVFDCHRTEKGVKQINEDHPYYEFKYLRNQEVRVFLVDKPEVFLRMLKA 712
Query: 352 EEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
E E L++V +KL ++ + D + SD S+ A WN R +L AL L +
Sbjct: 713 EAEGLVEVRVKLRDE--RRTIEDLHKAIESDNFSEVADAWNALRREVLGMALTK-LQRIL 769
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK- 470
K + + ++ + A K+ P++ KD ++ RVLA G G
Sbjct: 770 SKGVKDNLKNECENKIAGYCRDAFTQKLDQAPFKPKDMELG----TCARVLALSNGAGAR 825
Query: 471 -PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA 529
+ +D +G V++ L S V D + D R ++ + QP V+ +
Sbjct: 826 GDAICWAHVDENGRVLENGKFTDFRLGSDAVPDGK----DVSRFVELVERRQPDVIAVAG 881
Query: 530 VNLSCTSLKDDIYEIIFK-------MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRIS 582
++ L ++ +II K +E R+V D L +V + + RLY N+ +
Sbjct: 882 WSVETRQLYKNLQDIIEKKELHGTPYEDEDGREVS---DALEVVQPQDEVARLYYNTDRA 938
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE 642
+ PG + +AL Y+QNPL A L + I + + L D+ +E
Sbjct: 939 AADHPGVPPLTRYCIALAHYMQNPLKEYAAL---KKGITAITFDQNQLLLPEDKLMRYLE 995
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV-RAGAIFTRKDFV- 700
+VD+ N VG+DIN A + L ++ GLGPRKA ++ +++ G + R D V
Sbjct: 996 TALVDIVNLVGVDINEAFQDPYTQNLLPYVCGLGPRKADAMIKAIAANGGEVINRADLVG 1055
Query: 701 -----TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+G KV+ N FL + A D LD+TRIHPE Y +A+++A +
Sbjct: 1056 DVDNNKRQAVGGKVWENCASFLYI-----AWEDEPEADYLDNTRIHPEDYDIARKMAADA 1110
Query: 756 YNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYL 808
D E D+ ++D ++ + DR + L + + + KR TL
Sbjct: 1111 LELD-EEDIKAEQDEHGPNAVVRKLFKDEQVDRVNDLILEEYAQQLTMNFSQKKRATLET 1169
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLES 868
IR EL + +++ R + DE F M++GET ++L +G +V ++++ LE
Sbjct: 1170 IRAELQNPYEELRRNLFPLTSDELFTMMTGETRESLKDGMIVACSIKKTFSDHIEVKLEC 1229
Query: 869 GLAGMLMKEDYSDDWRDSELSDKL--HEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRY 926
G+ G + + ++ +D ++L + ++ K+ I + + L RE+EMR
Sbjct: 1230 GIDGGISETEFPEDMVQNQLEPRAVWSRDQVIQAKLTFIDRKKLTAQLTLRENEMRT--- 1286
Query: 927 QHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAK 986
+ ++ D + E ++ +KA ++ K ++R+I HP F+ + +A++ L +
Sbjct: 1287 PYRRSFDHGFDEWDDEQEDRDKKAARKAIEQKVGRQQRVIKHPLFKPFGSVQAVEALRNQ 1346
Query: 987 EPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTF 1046
GE IIRPSS G +L +T K+ + VY H D++E K+++ +G+ LK+G +
Sbjct: 1347 SRGECIIRPSSNGTDHLAVTWKIANDVYQHIDVLELDKENE-----FSVGRKLKVGSYVY 1401
Query: 1047 EDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEH 1106
DLDE++ ++ + + M + KF+ SK E D+ L P R +Y F I+ H
Sbjct: 1402 SDLDELIVLHVQAMAKKVDEMTNDDKFKDLSKKETDQWLTTYLEANPKRAMYAFCINTTH 1461
Query: 1107 PGTFILTYIRSTNPH--HEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
PG F L + H + + P+GF +K + D+ L F+
Sbjct: 1462 PGYFDLCFKAGEKAPIIHWPVKVIPQGFDLQKNKYPDMRALKNGFK 1507
>gi|449296340|gb|EMC92360.1| hypothetical protein BAUCODRAFT_151765 [Baudoinia compniacensis UAMH
10762]
Length = 1450
Score = 289 bits (739), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 278/1189 (23%), Positives = 540/1189 (45%), Gaps = 131/1189 (11%)
Query: 24 VDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDD----IMRFLDLLHLQKLDIPF 79
+E+TWI N + P++ S RD I + L +++ + F
Sbjct: 312 AEEATWITNNMF--------------PRKRELSSKMRDPFEQAIKQVLHFMNVDDFEPAF 357
Query: 80 IAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKV-------LWAIHDLDKKWLL 132
I RK+ + +V D + D P H LW+I + D K+
Sbjct: 358 IFQNRKDYLI------HSEQVPTDPDPDHPGAPDYSVHAEKLLNQDDLWSILEQDLKYRA 411
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDV-DLKF 191
+++ A+Q ET +N++ DS + L + ++DD+ DL+
Sbjct: 412 FSEKRDAIQKGL-------------ETLKEVNEEFNDSTFEDL--VPSAAQIDDLQDLQD 456
Query: 192 NLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWE---------VASKFGYSSEQLGLQL 242
++F + D ++ T+ + +W+ + FG +++ G+
Sbjct: 457 YMNFQYSQQLRDVSMHEAETNGTQKRARGTRNIWDKVRAGPAYHLVRGFGITAD--GVAQ 514
Query: 243 SLEKMGDEL--EDPKETPEEMASNF-KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR 299
++EK G + +D + P++ A + F + + VL A+ M E++ P +R+++R
Sbjct: 515 NIEKTGRKTYTDDMDQRPDDFADALVQEPDFRTGEDVLTAAKAMFIEELANNPRLRRHMR 574
Query: 300 SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLL 357
I+ V T G ID H + K+L+ + + D L ++ +AE L+
Sbjct: 575 KIYYGQIVFDVHRTEKGLKQIDEEHPYYEFKYLKAQEIAHLLDKPELFLRMLQAESAGLI 634
Query: 358 QVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARS 417
+V ++L S ++ + + SD S+ A WN R + AL L M + +
Sbjct: 635 EVNVRL--QSERRVRDELYKAIESDNFSEVADAWNALRRECVDAALKK-LHKIMSRGVKD 691
Query: 418 LMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE--TTF 475
+ ++ + M+ K ++ P++ + D+ PRVLA G G + +
Sbjct: 692 TVKNECENRIAMDCRKEYTLRLDQAPFRPEGMDLG----TVPRVLALSNGSGNRDDAICW 747
Query: 476 VMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSC 534
++ SG V + G T LR N D ++ + +P V+ + ++
Sbjct: 748 AYMEESGRVQE---NGKFTDLRGGNEEKFIPAGKDIPLFIELVERRKPDVIAVSGWSVET 804
Query: 535 TSLKDDIYEIIFK----------MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSD 584
SL D+ +I+ VE+ R E+ E+ IV ++ + RLY S +
Sbjct: 805 RSLYKDLQQIVSDHKLMGAVWDDAVEDRER---QELLEVVIV--NDEVARLYHTSSRAER 859
Query: 585 QLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQV 644
+ P + + L RY+Q+P+ A L G +I S P +N + D+ +E
Sbjct: 860 EFPSMPPLTRYTIGLARYMQSPVKEYAAL---GSDIRSISFDPNQNLIPEDKLMRWLETS 916
Query: 645 MVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVR-AGAIFTRKDFV--- 700
MVD+ N VG++IN A+ + L +I+GLGPRKA + ++ + G + +R D V
Sbjct: 917 MVDMVNLVGVNINEALDDTYNANLLPYIAGLGPRKAQQMLSAIGKNGGEVISRADLVGDV 976
Query: 701 ---TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---E 754
+G + N F+ + + + D LD+TRIHPE Y LA+++A E
Sbjct: 977 DRNLRPAVGPVCWTNCASFIYINYNDVEGDGPE-ADYLDNTRIHPEDYDLARKIAADALE 1035
Query: 755 VYNRDIEGDLNDDEDALEMAIEHV--RDRPDLLKTYLLDRH---IKEKKRENKRETLYLI 809
+ DI+ ++ DE+ + + D+ D + +L+++ ++++ R+ KR TL I
Sbjct: 1036 LDEEDIKAEV--DENGASAVVRRLVKEDQQDRVNDLVLEQYADQLEKQMRQRKRATLETI 1093
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
R EL + +++ R + D+ F M++GET ++L EG +V V+R G L+ G
Sbjct: 1094 RAELQNAYEELRRNFNFIGSDQIFTMLTGETRESLQEGMIVPVVVKRTFGDHIDVRLDCG 1153
Query: 870 LAGMLMKEDYSDDW----RDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN- 924
+ G +++ ++ ++ R+ +H+ ++ K+ + + ++ L RE+E++ +
Sbjct: 1154 VTGSILESEFPEEIYKENREPRTVWSIHQ--VIRAKVLHLNRKVFEAGLTLREAEVKKSF 1211
Query: 925 RYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLS 984
R Q LD + E S + E KA + +R+I HP F+ + +A++ L
Sbjct: 1212 RRQFDHGLDEWDDELESRDRKEARKAVD----SSTGRAQRVIKHPLFRPFNSAQAVEYLG 1267
Query: 985 AKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED 1044
+ GE +IRPSS+GP +L +T KV++GV+ H D++E K+++ +G+ L++G
Sbjct: 1268 PLQRGECVIRPSSKGPDHLAVTWKVHEGVFQHIDVLELDKENE-----FSVGRVLRVGGK 1322
Query: 1045 -TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGIS 1103
++ DLDE++ ++ ++ ++ M+ +++ GS+ + ++ L P R +Y F ++
Sbjct: 1323 WSYSDLDELIVLHVRAMLRKVEEMMGDERYQSGSRQQTEQWLETYTEANPKRSMYAFCLN 1382
Query: 1104 HEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
++PG F L + R + + + P F+ + + D+ L F+
Sbjct: 1383 PKYPGYFYLCFKAGRDAPLSNWPVKVIPNAFELQGNKYPDMRALKNGFK 1431
>gi|452844772|gb|EME46706.1| hypothetical protein DOTSEDRAFT_70645 [Dothistroma septosporum NZE10]
Length = 1426
Score = 289 bits (739), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 286/1129 (25%), Positives = 519/1129 (45%), Gaps = 87/1129 (7%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNND--NNDDFERTPTLKWHKVL 120
+ + L + + +L+ PFI RK+ + V ND N +F T+K K+L
Sbjct: 330 VRQVLSFMDVDRLEPPFIFQNRKDYLI------HSERVPNDDPNGPEF----TIKAEKLL 379
Query: 121 -----WAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF-DSISKS 174
W + + D K+ +R+ A+Q E R DET N +F D I K+
Sbjct: 380 NQTDLWDVFEQDLKYRAFSERRDAIQKNV------ELLRELDET---FNDAVFEDMIPKA 430
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVG--VDEGQYKRPK-RSTKYSSCSKAGLWEVASKF 231
+ + + D ++ + F + + G KR + + + K + V
Sbjct: 431 AQLDDLQDIQDYLNFWYATTFRDLSIAEAANNGTQKRARGNRSMWDKIRKGPPYHVTRAI 490
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF-KCAMFNSSQAVLQGARHMAAVEISC 290
G +S+ + +EDP + PE++A + + + VL A+ + E+
Sbjct: 491 GITSDAVARNAQGLGARTYVEDPDKLPEDLADTLIRDPDLRTGEEVLNAAKGIFVEELVN 550
Query: 291 EPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF---EDAQWLL 347
P +R ++R I+ +N V T G AI H + K+LR + +R F + +L
Sbjct: 551 SPRLRSHMRKIYYENLVFDCYRTEKGMKAIHEDHPYYEFKYLRNQEVRYFLVDKPELFLR 610
Query: 348 IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
+ KAE E L+ V ++L ++ + + SD S+ A+ WN R +L AL
Sbjct: 611 MLKAESEGLVDVKVEL--RGKGRIKEELMKAIESDNFSEIAEAWNSLRRQVLDKALQRLH 668
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
+ + K + + ++ + A K+ P++ K ++ RVLA G
Sbjct: 669 V-IISKGVKDNLKNECENKIAGFCRDAYIQKLDQAPFKPKGMELG----TCARVLALSNG 723
Query: 468 PGK--PETTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHV 524
G+ + +D SG V + G LR N D E + + +P V
Sbjct: 724 AGQRNDAICWAYVDESGLVKE---NGKFADLRLGNSEKYIPDGRDVEVFKELVERRKPDV 780
Query: 525 VVLGAVNLSCTSLKDDIYEIIFKM-VEEHPRDVGHE---MDELSIVYGDESLPRLYENSR 580
V + ++ L D+ +II K + P + E D L ++ + + RLY NS
Sbjct: 781 VAVSGWSVETRRLYKDLQDIIEKFELRGTPYEDDDEREVTDPLEVIIPQDEVARLYYNSP 840
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
++ P + VAL Y+QNPL A L ++I+S P + L D+
Sbjct: 841 RAAVDHPALPPLTRYCVALAHYMQNPLKQYAAL---RKDIISITFDPNQQLLPEDKLRRY 897
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFT-RKDF 699
++ +VD+ N VG+DIN A+ + L ++ GLG RKA + +++ + G T R+D
Sbjct: 898 LDTAIVDIVNLVGVDINEAMSDAYTQNLLPYVCGLGQRKAEYMVKTIGQNGGEVTKREDL 957
Query: 700 V-----TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK- 753
V G +++ N FL V + + D LD TRIHP Y +A+++A
Sbjct: 958 VGDLDRMRSSCGPQIWTNCASFLYVEWEDEREA-----DYLDGTRIHPSDYEIARKMAAD 1012
Query: 754 --EVYNRDIEGDLNDDEDALEMAIEHVRDRP-DLLKTYLLDRHIKEKKRE---NKRETLY 807
E+ D+ ++N++ + + VRD+ D + +L+++ ++ + + KR TL
Sbjct: 1013 ALEMDEEDVAAEINENGGESAVVRKLVRDQATDKVNDLVLEQYAEQLETQFGQKKRATLE 1072
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
IR EL + +++ R + S +E F ++GET+D+L EG +V +V++ + L+
Sbjct: 1073 TIRAELQNPYEELRRNFAPLSTEELFTQLTGETKDSLKEGMIVPVSVKKTFPEHIEVKLD 1132
Query: 868 SGLAGMLMKEDYSDDWRDS--ELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
G+ G + ++ +D + E + + I+ K++ I + + L RES ++
Sbjct: 1133 CGIDGGIGSLEFPEDMTANGVEPRNVWTQHQIIQAKLQFIDRRKLTAQLSLRESALKE-- 1190
Query: 926 YQHCQNLDPYYHEERSSRQSEQEKARKEKEL-AKKHFKERLIVHPCFQNVTADEAMKLLS 984
+ N D + +E +Q +++KA+ K L +K K+R+I H F+N + +A+ L
Sbjct: 1191 -PYRPNFD-HGMDEWDEQQEDRDKAQMRKTLESKSGRKQRVIKHTLFRNFDSAQAVGALQ 1248
Query: 985 AKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GE 1043
GE IIRPSS+GP +L +T K+ GV+ H D++E K+++ +G+TLK+ G+
Sbjct: 1249 DAPRGECIIRPSSKGPDHLAVTWKIAKGVFQHIDVLELDKENE-----FSVGRTLKVAGK 1303
Query: 1044 DTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGIS 1103
T+ DLDE+V ++ + + M + K++ G+K ++ L P R +Y F I+
Sbjct: 1304 YTYTDLDELVVNHVQAMAKKVDEMTNDEKYQNGTKQATEQWLSTYTEANPKRSMYAFCIN 1363
Query: 1104 HEHPGTFILTYIRSTN-PH-HEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
++PG F + + PH H + + P GF+ + + + D+ L F+
Sbjct: 1364 PQYPGYFYCCFKAGQHAPHGHWPVKVIPNGFELKGQRYPDMRALKNGFK 1412
>gi|315047346|ref|XP_003173048.1| hypothetical protein MGYG_05634 [Arthroderma gypseum CBS 118893]
gi|311343434|gb|EFR02637.1| hypothetical protein MGYG_05634 [Arthroderma gypseum CBS 118893]
Length = 1420
Score = 288 bits (737), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 277/1130 (24%), Positives = 506/1130 (44%), Gaps = 87/1130 (7%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLW 121
+ + L+ + ++PFI +RK+ + +K + N D L LW
Sbjct: 321 VAKVLEFMVTDDWEVPFIFQHRKDYLIHAVKIPIPDGGTNPDGGKYIVEAEKLLSMIDLW 380
Query: 122 AIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETE 181
I + D K+ L +++ LQ+ Y +T + ++F+ + L AA T
Sbjct: 381 DIFEFDLKFRALIDKRNTLQTTYDNL----------QTISNVKDEMFEEM---LPAAVTM 427
Query: 182 REVDDV-------------DLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVA 228
E+ DV DL GE G Q ++ T + + + +
Sbjct: 428 EELQDVQDYLYFQYSTELKDLALVNSNHEGENGA-ASQRRKASTKTFFERVRNSRAYGLV 486
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEI 288
FG + + + ++D E P +MA N + F++ ++ AR M A E+
Sbjct: 487 RAFGITPDAFAQNVMETGRKQYIDDASEKPTDMADNLLDSSFSNGAHAMKAARAMFAEEL 546
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLI 348
+ P VRK +R F + V+ T G ID H + K+LR++ + L +
Sbjct: 547 TMSPRVRKVMRQAFYMSGVIECFRTEKGLKKIDEHHPYYEFKYLRDQQISDIARRPELFL 606
Query: 349 Q--KAEEEKLLQVTIKLPE-DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
+ KAEEE L+++ + + D K L+ + + SD S+ A WN +R+ +L AL
Sbjct: 607 RMLKAEEEGLVEIKVHFKDFDHFKKRLYPEIQ----SDNSSEVADAWNKERKDVLDLALG 662
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
L M K + + ++ + E + ++ PY+ K + PRVLA
Sbjct: 663 K-LEKIMSKGVKENIRTECENHVARECREVFSQRLDQAPYKPKGMILG----TIPRVLAL 717
Query: 465 CWGPG---KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQ 521
G G K + ++ G V++ + L + + D E ++ + +
Sbjct: 718 TNGSGVVGKDPIYWTWVEEDGRVLE--HGKFVDLGLGDPDRMIADGKDVEAFVELVDRRK 775
Query: 522 PHVVVLGAVNLSCTSLKDDIYEIIFK-------MVEEHPRDVGHEMDELSIVYGDESLPR 574
P V+ + + L + E++ +E +V D L +V ++ + R
Sbjct: 776 PDVIGVSGQSPETRKLYKQLSELVQAKDLRGAFYTDERDEEVS---DILEVVIVNDEVAR 832
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
LY+ SR + PG + VAL +YLQNPL A+L GR+++S + P + +
Sbjct: 833 LYQTSRRAEVDHPGFSLQSRYCVALAKYLQNPLKEYASL---GRDVVSIQFRPGQQLIPQ 889
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAI 693
D+ +E +VD+ N VG+DIN A+ L ++SGLGPRKA+ L + + + G +
Sbjct: 890 DKLLKQLETALVDMVNLVGVDINEAVSDVSTANLLTYVSGLGPRKASQLLKVINMNGGVV 949
Query: 694 FTRKDFVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQ 749
+R + + + +G KV+ N FL + + D LD+TR+HPE Y + +
Sbjct: 950 NSRMELLGVNAQYPAMGVKVWNNCASFLYIDYDNADPDT----DYLDNTRVHPEDYDIGR 1005
Query: 750 ELAK---EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKEKKRENKR 803
++A E+ DI+ + +++ + D D + LL+ + ++ + KR
Sbjct: 1006 KIAADALELDEEDIKAETDENGQGAIVRKLIKEDAQDKVNDLLLEEYAEQLENNLNQRKR 1065
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAI 863
TL IR EL +++ R Q+ D F M +GET ++L +G +V T++RV
Sbjct: 1066 ATLETIRAELQQPYEELRKQFVFLGTDAIFTMFTGETAESLVQGMIVPITIKRVSDDHID 1125
Query: 864 CVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN 923
L+ G+ ++ + + +D + D + KI + + + + RE ++ N
Sbjct: 1126 GKLDCGIDALVPESEMTDRY-DIPVRSLYAPHQTALAKITYLNRKSFVANVSLREDQV-N 1183
Query: 924 NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLL 983
Y+ + LD E ++ E ++A KEK + R+I HP F+ +A + L
Sbjct: 1184 KPYR--RQLDHMRGEWDEDQEREDQEAMKEKTQTDQR-TLRVIKHPLFRPFNGRQAEEFL 1240
Query: 984 SAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-G 1042
+ + G+ +IRPSS+G +L +T KV DGVY H D++E KD+ +G+ LKI G
Sbjct: 1241 APQSRGDVVIRPSSKGHDHLAVTWKVADGVYQHIDVLELDKDND-----FTVGRILKIGG 1295
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+ ++ DLDE++ ++ + + M+ + K++ G+K + L P R Y F +
Sbjct: 1296 KYSYTDLDELIVNHVKAMSRKVDDMMVHEKYQSGTKEATEGWLTTYTTANPKRSAYAFCL 1355
Query: 1103 SHEHPGTFILTYIRSTN-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+HPG F L + P + + + + P+G++ ++ + D+ L F+
Sbjct: 1356 DTKHPGYFHLCFKAGLKAPLNSWPVKVIPQGYELQRTPYPDMRALCNGFK 1405
>gi|403370431|gb|EJY85077.1| Zinc knuckle family protein [Oxytricha trifallax]
Length = 1917
Score = 286 bits (732), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 341/1509 (22%), Positives = 616/1509 (40%), Gaps = 280/1509 (18%)
Query: 23 IVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
I +E WIY +LL + +R H+ ++ I + L + L+ +D+P+IA
Sbjct: 286 IANEIGWIYQRLLDES-----KRDTLL----HNELPAKRKIEKVLRNIRLEYMDVPYIAK 336
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRK E + L N +D +W+I +LD ++ Q + ++
Sbjct: 337 YRKFEYMKEL-----------NEED------------IWSIFNLDIEYGRFQNQLELMKE 373
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD----VDLKFNLHFPPG 198
+K L+L + +E + ++++ + + + ++
Sbjct: 374 QLRK--------------LSLIEPRLQDYLGQIETVKDQKQLQNFSPLIAFLKSYYYEEL 419
Query: 199 EVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETP 258
+ DE K P + + L + A + L P +
Sbjct: 420 QSMPDEKTKKLPYKQDNVIQIRRYRLDQCARRVFLDPMLFVENLMNNSFMHVHPIPNQNI 479
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
E+ + C +++ LQ + ++S +P +R ++ + +ST P+ G
Sbjct: 480 NEVLQPYLCEAYSTWDICLQAILRFQSQQLSVQPYIRSQMKKHMYNVGTISTEPSEQGKK 539
Query: 319 AIDSFHQFAGVKWLREKPLRKF---EDAQWLLIQKAEEEKLLQVTIKLPEDS-LNKLFSD 374
+D FH VK ++ +PL E Q L + + EK + + DS L + FSD
Sbjct: 540 DLDPFHPSYRVKRIKSEPLNNLINNEGLQDLFLDITQNEKSGLIKVAFHYDSQLMQNFSD 599
Query: 375 -CKEHYLS-DGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
Y+S D +++ + ++ A+ + L+ + KE R + A+++++
Sbjct: 600 ELARFYVSHDYTENYIKIYKES----IRSAIMDTLIDEITKEIREELKQNAENFVIKNCQ 655
Query: 433 KALWNKVSVGPYQRKDNDITP--DEEAA---------PRVLACCWGPGKPETTFV----- 476
N + GP+ +D + DE A P V+ P +P T +
Sbjct: 656 ARYKNLLMTGPFSTEDQNKRSERDEYAGSSKTRRDDDPNVVI----PDRPRCTVMGVILQ 711
Query: 477 MLDSSGEVVDVLFT---GCLTLRS----------------QNVRDQQSKK---------- 507
+DS+ ++V + G L QN D + ++
Sbjct: 712 QIDSNNQLVSLAIVDKYGELVAHKDLQHLMPPRKFNMAPGQNATDDEDQRYKKAKLQHSE 771
Query: 508 ------NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE----------- 550
+D++++ ++ HQ ++V+GA L ++K + EI + +
Sbjct: 772 EVKEHESDKDKIKDLILKHQVDLIVVGANKLGARTIKKVLSEIAEGIKQFGSGQLSSMDF 831
Query: 551 -----EHPRDVGHEMD----ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGR 601
R G M+ E +++G +P+L+ NS S L G +K+AV+L R
Sbjct: 832 DDRRGSKNRKGGDTMEDYRKEAFVIWGSLEIPKLFSNSHQSQKLLKGCHPVLKQAVSLAR 891
Query: 602 YLQNPLAMVATL---CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINL 658
Y Q+P+ V L + L L PL+ + + +E++ + N VG+D+NL
Sbjct: 892 YEQDPMNEVLNLWSFVPSENQTLQIDLHPLQKLINQAKLSDSLEEINIQCVNAVGIDLNL 951
Query: 659 AIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLGKKVFVNAVGFL 717
I + L FIS GPRKA + L R I R D + +G+ +++ + F+
Sbjct: 952 LIDHDHMHILLSFISCFGPRKAKQFIQDLKSRGNKILRRSDLYNSKYMGRHMYLYSSAFM 1011
Query: 718 RVRRSGQ---AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMA 774
++R + Q +Q ++L+ TRIHPESY LA ++AK+V + D+ + AL
Sbjct: 1012 KMRLNTQDMMGGIQNQSQEILEMTRIHPESYLLAHKIAKDVIYSGQDVDILHTQKALA-- 1069
Query: 775 IEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRR---ELIHGFQDWRNQYKEPSQD- 830
H+ P LK L + +E ++ +++ L+ EL F+D R +Y+ P++
Sbjct: 1070 --HIIQNPQKLKELDLKLYSQELEQSDQQNMFTLVEYIIDELSAPFKDPR-EYRTPTKQN 1126
Query: 831 ----EEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDS 886
E FYM+ E++ T +G +V ATV +V +C L++GL + K D + D
Sbjct: 1127 LTNQELFYMLIDESDKTFKKGIIVTATVSKVFENMVLCRLDNGLDATIQKNDL--EKTDD 1184
Query: 887 ELSDKLHEGDILTCKI---KSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSR 943
+L + + G ++T +I K+ + R+ V L C++ ++ ++ + Y ++ +
Sbjct: 1185 KLQNLIQPGHVITGRIHELKTQDEQRFGVSLNCKKKDLESH--------EGYIDKQHVAP 1236
Query: 944 QSEQEKA----RKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRG 999
+ Q +A +K ++ + F R I HP F+N+T+ A++ L ++ GE I RPSS+G
Sbjct: 1237 EDWQNQAFVTDKKIQQAGRIIF--RRIAHPKFKNITSQRAIQELQDQDIGEYIFRPSSKG 1294
Query: 1000 PSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG--IGKTLKIGEDTFEDLDEVVDRYI 1057
+ +TLT K Y H DI E K VG IG L I ++ FE+L E+V+RYI
Sbjct: 1295 ENNITLTWKFYQNNIVHIDIPEHDK-------AVGASIGSKLSISDEIFENLQEIVERYI 1347
Query: 1058 DPLVSHLKAMLSYRKFRKGSKAE-VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIR 1116
P +++ + +KF+ +E ++++L+ EK RI Y I ++P +L YI
Sbjct: 1348 MPCNKNVRDVCQNQKFQHFENSEDLEKVLKDEKTADANRIPYKLTILPQYPQHVVLAYIP 1407
Query: 1117 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQ-------GDSAPSIRSVAA 1169
EYI + P+G F + L+ +F+ + + ++P + +
Sbjct: 1408 KQQMIKEYIKVKPRGLYFHDKYHTPSQALINWFKMNYSQKEYLKQMKRNKNSPRAK-IIN 1466
Query: 1170 MVPMRSPANGGSTA----SAGSGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGG------ 1219
R+ A+GG+ G+ W G +NE W R S P S ND G
Sbjct: 1467 TDQSRAQASGGAPEFGRNKPGNEWSGVSNE--W---RKSAPNSIHSMNDDNEGNTQYAGQ 1521
Query: 1220 -------GRDGH-----------------------------------PSGLPRPY----- 1232
GR G+ P+ + +
Sbjct: 1522 TNRGNDHGRSGYNPSYSEYGQSGAGRGGGGSGLCYNCNETGHMARDCPTKSQKSFGRGSK 1581
Query: 1233 GGRGRGRGSN----------------NSNRGNSSNSERQDSSYDTPKWDSANKSGDDSWG 1276
GG GRG NSNR N + + D P + + G W
Sbjct: 1582 GGTSYGRGQRRGNDNDNDNGGGNNDYNSNRRNDTTDNNWGAPRDLPPVTNDSAGG---WN 1638
Query: 1277 NFPGAKAQNPAGREAFPGGWGSSGGGG----SSGWGGASDGDNGGWGHSSGGADKDSGWG 1332
G + P E GWG + G ++ W G + WG S+ +++ G+
Sbjct: 1639 TGAGNDHE-PMQVEPSNQGWGVTNTPGNLHAATSWDPQPAGQSNDWGTSND--NQNEGYS 1695
Query: 1333 GGGSKRSSD 1341
S RS +
Sbjct: 1696 PARSNRSDE 1704
>gi|320170827|gb|EFW47726.1| hypothetical protein CAOG_05664 [Capsaspora owczarzaki ATCC 30864]
Length = 1737
Score = 286 bits (731), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 217/760 (28%), Positives = 361/760 (47%), Gaps = 75/760 (9%)
Query: 456 EAAPRVLACCWGPGKPETTFVMLDSSGEVVDV---------LFTGCLTLRSQNVRDQQSK 506
E RVLA G + VMLD +G V+D + G T S VR+++
Sbjct: 836 EKGARVLAVVPGSQDTPSFAVMLDGNGRVLDFARLQHFLKRVSEGDFTSESARVREEE-- 893
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
+RL ++ +PH + LG L KD ++ + + + P D + +++
Sbjct: 894 ---LDRLKSMIVSKRPHAIALGLDRLEYRRNKD----LLERCLRDIPSDEYPFVSSVAVQ 946
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGR-------- 618
D + L EN+ + + P ++RA+++GR LQ+PL +A+LC G
Sbjct: 947 LVDMAAALLKENTARFAREFPDYPPLLRRAISVGRRLQDPLTEIASLCVEGATLVGGNGG 1006
Query: 619 -----------------------------EILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
E+ +L PL++ + + QV++D
Sbjct: 1007 SFGTGTMAGANVRAASSLVLSHSGVAIEDELTLLRLHPLQSIIPTTALRPALIQVLIDNV 1066
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG-LGKK 708
VG+D+ A+ + LQF++GLGPRKA +L ++ AG ++ + G LG
Sbjct: 1067 ALVGVDMTQALLHPHTASTLQFVAGLGPRKAPALLEAIKAAGGRPRSREAIGLTGNLGPT 1126
Query: 709 VFVNAVGFLRVRRSGQ----AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDL 764
V +N +GFLR+ A S +ID+LD T IHPE+Y +A+++A++ + D
Sbjct: 1127 VLMNCIGFLRIFGVSDPDEDAGEPSSYIDILDTTLIHPENYDVARKIARDALDYD----- 1181
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK----RETLYLIRRELIHGFQDW 820
DE A +E + + L LD + + + + R TLY IR EL + D
Sbjct: 1182 TIDERAPSHHVEELLRQRQKLNEVDLDHYAQHMEAAHVGKRIRTTLYDIRSELTYHGVDS 1241
Query: 821 RNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYS 880
R ++ S D++F +++GE++ TL EG +V TV +Q + L++G+ G + S
Sbjct: 1242 RPPFRPLSDDDKFTLVTGESDATLWEGMLVDCTVVSLQEKSVRVRLDNGMIGFIGISRLS 1301
Query: 881 DDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEER 940
D R SD + G + +I + K L + S+++N D +Y +
Sbjct: 1302 DS-RVENPSDYVRPGQHVHARITRVNKLNMTADLTSKSSDLQNTSGVFTPRRDTFYDLDC 1360
Query: 941 SSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGP 1000
EQ +AR + + + R I H F+NV +A+ LL A G+ IIRPSS+G
Sbjct: 1361 EKFDQEQARARARRLAKRATYVPRTIQHGRFKNVDLRKALALLKAGHDGDVIIRPSSKGG 1420
Query: 1001 SYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPL 1060
L +T ++ +GVY H +++E K S +G+ L IG++ F+DLDE++ R++ P+
Sbjct: 1421 DSLVVTWRLAEGVYQHLEVVEQNK-----PSPTELGRELYIGKERFDDLDEILARHVSPM 1475
Query: 1061 VSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNP 1120
+ L+ S + + E+D+ LR EKA RI Y + + PG +L Y+ S +
Sbjct: 1476 FNLLQDARSAKFWTNAPVPEIDQSLREEKAAQSGRIPYKLALVPDKPGRLLLAYLPSHSV 1535
Query: 1121 HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDS 1160
HEY+ L P GF+FR F I +L+A+F+ H +DP S
Sbjct: 1536 RHEYVSLTPDGFRFRGHGFALIAKLIAWFKVHFNDPTPSS 1575
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 215/531 (40%), Gaps = 134/531 (25%)
Query: 19 DGES-IVDESTWIYNQLLSGTLPLFG-QRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLD 76
+GE+ +V E+ WI+ Q+ LPL G Q + S +D + + I LDL+ Q ++
Sbjct: 256 EGENELVSEADWIFRQVF---LPLSGSQWSSESQSTDYDAATMKPKIQAALDLIRNQGME 312
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA +RKE + E+ +TP L W I+ D W L +R
Sbjct: 313 VPFIAKFRKEYI--------ETEI---------QTPEL------WKIYAQDVVWSALVRR 349
Query: 137 KSALQSYYK--KRYEEESRRIYDETRLALNQQL--------------------------- 167
K ++Q + Y +E+ ALNQ L
Sbjct: 350 KRSVQKGLVDLRSYLQEA---LIAASTALNQSLESQSNFELGSTAGSSEDRERSANVNHG 406
Query: 168 FDSISKSLE---AAETEREVDDVDLKFNLHFPPGEVGVDEGQY-----------KRPKRS 213
D + ++L + EVDD+ NLHF + + K+P +
Sbjct: 407 LDLVERALHLLTESHVPLEVDDITDHLNLHFGDALANIRAKRSAADAARDAPFTKKPVQR 466
Query: 214 TKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGD-ELEDPKETPEEMASNFKCAM--F 270
++ +AGL + +F + EQL L + E P ETP A + F
Sbjct: 467 DQHLVAREAGLLRLQRQFCLAVEQLAENLRQDYQAHYPPESPVETPTTAAQEYATGRHGF 526
Query: 271 NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVK 330
+S++ VL R A EI+C+P +R VR + +S PTP G +D HQ+A K
Sbjct: 527 SSAETVLSAVRMATAQEIACDPVIRTVVRQHMTERGYLSVRPTPRGARELDESHQYAPFK 586
Query: 331 WLREKPLRKFEDAQWLLIQK---------------------AEEEKLLQV---------- 359
++ +KP F+D Q+LL+ K AEE++ ++
Sbjct: 587 YITKKPFSSFKDEQFLLMLKAEKEGLLQLYFGLPLTEAENRAEEDRQVEADRKARAAVDA 646
Query: 360 ----------TIKLP-------EDSL---------NKLFSDCKEHYLSDGVSKSAQLWND 393
T LP + SL +LF+ + GVS++A LWN+
Sbjct: 647 AEAAAPVGAATSSLPKFVPATIQTSLLSAAESVRKTRLFALFDSFFCDTGVSETANLWNE 706
Query: 394 QRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY 444
QR +IL AL LLP + +E R + RA ++ + AL V VGP+
Sbjct: 707 QRRMILVGALQLLLLPRIEREIRVQLEDRAIQFVASKCAAALNELVRVGPF 757
>gi|297700360|ref|XP_002827255.1| PREDICTED: transcription elongation factor SPT6 [Pongo abelii]
Length = 1671
Score = 285 bits (728), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 196/639 (30%), Positives = 329/639 (51%), Gaps = 74/639 (11%)
Query: 603 LQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHR 662
+Q+PL A +C +IL K PL+ + +E + ++ N+VG+D+N AI
Sbjct: 865 IQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAH 924
Query: 663 EWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRR 721
+ A +Q++ GLGPRK L + L + + +R VT +G KVF+N GFL++
Sbjct: 925 PYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDT 984
Query: 722 SGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDR 781
+ S+ +I++LD +R+HPE+Y A+++A + +E D + ++ A+E + +
Sbjct: 985 ASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILEN 1040
Query: 782 PDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISG 838
P+ LK LD +E +R+ +K TLY IR EL ++D R Y+ P+ +E F M++
Sbjct: 1041 PERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTK 1100
Query: 839 ETEDTLAEGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRD 885
ET +T G+++ V RR QG+ +AI E+GL ++++ S+ W
Sbjct: 1101 ETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNH 1160
Query: 886 SE---------------------------LSDKLHE--------GDILTCKIKSIQKNRY 910
+ LSDK+ + G + C+I I ++
Sbjct: 1161 FDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKF 1220
Query: 911 QVFLVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVH 968
L CR S++ RNN ++ + D YY + + +QE+ K K+ + K R+I H
Sbjct: 1221 SADLTCRTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAH 1277
Query: 969 PCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKD 1028
P F N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 1278 PSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA- 1336
Query: 1029 IKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELL 1085
+G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL
Sbjct: 1337 ----FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELL 1392
Query: 1086 RIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRL 1145
K E PT I Y E PG F+L Y P EY+ + P+GF++R ++F ++ L
Sbjct: 1393 IKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGL 1452
Query: 1146 VAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
+F+ H DP PS S R+PA+ +T +
Sbjct: 1453 FRWFKDHYQDPVPGITPSSSSRT-----RTPASINATPA 1486
Score = 180 bits (456), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 242/565 (42%), Gaps = 91/565 (16%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVN 531
Q E L KF+++ +PHVV + N
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGEN 854
>gi|225685155|gb|EEH23439.1| transcription elongation factor spt6 [Paracoccidioides brasiliensis
Pb03]
Length = 1407
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 288/1132 (25%), Positives = 503/1132 (44%), Gaps = 98/1132 (8%)
Query: 6 CRSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR 65
C+ RK E +E+ WI N L L +R +E SI++
Sbjct: 285 CQVARKQYKHVILTEEQFKEEAIWISN------LMLLKKRLDPDLREPFQRSIAK----- 333
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + ++PFI +RK+ + K + + N D + + L LW I
Sbjct: 334 VLEFMITDDWEVPFIFQHRKDYLIHAAKVPVSPDPSNPDGPEYVVKAEKLLNMTDLWDIF 393
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREV 184
+ D K+ L +++ LQ Y +T ++ +F+S+ L A T E+
Sbjct: 394 EYDLKFRSLIDKRNTLQKTYDNL----------QTICNVHDDIFESM---LPLAVTMEEL 440
Query: 185 DDVDLKFNLHFPP--GEVGV-----DEGQYKRPKRSTKYSSCSK---AGLWEVASKFGYS 234
DV +P ++ + + G K+ +++T S + + +E+ FG +
Sbjct: 441 QDVQEYLYFQYPTQLKDIAIVNGSSENGTSKQRRKATTRSFSERVRNSRAYELVRAFGIT 500
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
++ E EDP E P+ A N +F + L+ A+ M A EI+ P +
Sbjct: 501 ADAFAQNALKEGKRQYTEDPVEPPDVTADNLLDDIFTNGGHALKAAKAMFAEEITMSPKM 560
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAE 352
RK +R F N ++ T G +D H + K+LR + L L ++ KAE
Sbjct: 561 RKVMRQAFYMNGIIECFRTEKGLKRVDEQHPYYEFKYLRNQQLTDIARRPELFLRMLKAE 620
Query: 353 EEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
EE L+ V ++ + + + H +SD S+ A WN +R+ I+ AL L M
Sbjct: 621 EEGLVDVKVRF--QNFDNFKKNLYSHIVSDNFSELADAWNRERKEIVDMALGK-LERIMS 677
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PG 469
+ + + ++ + E +A ++ PY+ K + PRVLA G G
Sbjct: 678 RGVKENIRTECENHVAKECREAFSLRLDQAPYKPKGMILG----TIPRVLALSNGNGIVG 733
Query: 470 KPETTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG 528
K + ++ G V++ G T L + + D ++ + +P V+ G
Sbjct: 734 KDPIYWAWVEEDGRVLE---NGKFTDLAPGDSGRMIADGKDVAAFVELVERRKPDVI--G 788
Query: 529 AVNLSCTSLKDDIYEIIFKMVEE-------HPRDVGHEM-DELSIVYGDESLPRLYENSR 580
S + K +Y+ + +V + D E D L ++ ++ + RLY+ S
Sbjct: 789 VSGFSPETRK--LYKQLSDLVSSKDLRGATYTNDYDEEANDLLEVIIVNDEVARLYQTSE 846
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
+ + P VAL +YLQNP+ A+L GR+I+S + P + + D+
Sbjct: 847 RAKMEHPSFAALTHYCVALAKYLQNPMKEYASL---GRDIVSIQFKPGQQLVPQDKILKQ 903
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDF 699
+E +VD+ N G+DIN A L ++ GLGPRKAA L + + + G + R +
Sbjct: 904 LETALVDMVNLCGVDINEAATDTATANLLPYVCGLGPRKAAHLLKIINMNGGIVNNRIEL 963
Query: 700 --VTAH--GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
V AH +G KV+ N FL + S+ D LD+TR+HPE Y + +++A +
Sbjct: 964 LGVNAHYPAMGVKVWNNCASFLYI----DYDSTDPDADYLDNTRVHPEDYDIGRKMAADA 1019
Query: 756 YNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYL 808
D E D+ + D ++ E +DR + L +++ + KR TL
Sbjct: 1020 LELD-EEDIKAETDENGQGAIVRKLIKEDAQDRVNDLILEEYAEQLEKNLNQRKRATLET 1078
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLES 868
IR EL +++ R Q+ S D F M++GET ++LAEG +V +++RV L+
Sbjct: 1079 IRAELQQPYEELRKQFVFLSTDAIFTMLTGETHESLAEGMIVPISIKRVTDDHIDGKLDC 1138
Query: 869 GLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQH 928
G+ + + + +D + D + + KI + + +Q + RESE+ +H
Sbjct: 1139 GIDAVAGEVEITDRY-DIPIRSLFAPHQTVQGKILYLNRKLFQANVSLRESEISKPYRRH 1197
Query: 929 CQNLDPYY--HEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAK 986
L + +E + R++ +EKA R+I HP F+ A +A + L+ +
Sbjct: 1198 FDRLRGEWDDRQEDADREASREKAETSGRTM------RVIKHPLFRPFNAAQAEEFLAPQ 1251
Query: 987 EPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDT 1045
G+ +IRPSS G +L +T KV +G+Y H DI+E K+++ +GK LK+ G +
Sbjct: 1252 SRGDVVIRPSSNGIDHLAVTWKVSEGIYQHLDILELDKENE-----FSVGKILKVGGRYS 1306
Query: 1046 FEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIV 1097
+ DLDE++ +I + + M+ + KF+ GSK++ + L P R V
Sbjct: 1307 YSDLDELIVNHIKAMAKKVDDMMMHEKFQDGSKSDTERWLDTYTKANPRRSV 1358
>gi|389641103|ref|XP_003718184.1| transcription elongation factor SPT6 [Magnaporthe oryzae 70-15]
gi|351640737|gb|EHA48600.1| transcription elongation factor SPT6 [Magnaporthe oryzae 70-15]
Length = 1407
Score = 283 bits (724), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 264/1071 (24%), Positives = 484/1071 (45%), Gaps = 101/1071 (9%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I DLD K+ ++++ L Y+ + + +FD + + AE
Sbjct: 378 LWRIVDLDLKFRSFVEKRNILDKSYQ-----------NLKTAGIQDDVFDEM---VYRAE 423
Query: 180 TEREVDDVDLKFNLHFPP-----GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
T E+ DV + H+ G +G + K + + + ++ +G +
Sbjct: 424 TIEELQDVQDYMHFHYSSQMKDLAAAGAIKGVKRVAKSTGVFERVRNSTVYNFVKAYGIT 483
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
++L E ED + P ++A + + F+++ V++ AR M A E+ P +
Sbjct: 484 PDKLAQNALREGKKTSAEDNSKMPLDLADSLTDSYFDTADHVIKAARSMFAEELFLNPRM 543
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPL----RKFEDAQWLLIQK 350
R++ + + + +V T G ID H F +K+L + + R+ E +L + K
Sbjct: 544 RRHFKVAYYNMGIVDCRRTEKGLRKIDESHPFYEIKYLINQTIGDLARRPE--IFLKMMK 601
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LL 408
AEEE L++V + L + + + + S+ S+ A WN++R+ L A ++
Sbjct: 602 AEEEGLVEVKLTLQNE--REFRKNLLSEFQSENFSERADAWNEERKKALDLAFPKLEKII 659
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
VKE+ + + LL + +V P++ K + PR L G
Sbjct: 660 TKGVKES---LRTACQDELLKICREEFSKRVDQAPFRPKGFMLG----MTPRCLVISNGM 712
Query: 469 GKPETTFV--MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
P + L G++V+ G L RD+ ++ ++ + + +P V+
Sbjct: 713 ADPNRDLLCWALVDDGKLVEQGKFGSLG------RDEAARTAFEDVVER----ARPDVIG 762
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE----------LSIVYGDESLPRLY 576
+ + L D+ +I +G+E D+ L +V ++ RLY
Sbjct: 763 VSGWSADTQRLVKDLETLI-----SEKGLMGNEFDDPDTDEVRTELLEVVVVNDETARLY 817
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDE 636
++S P + V L RY+QNPL C G++ S + P +N L P +
Sbjct: 818 KDSARGVSDYPNLNPVTRYCVGLARYMQNPLK---EYCLLGKDNTSLAIHPCQNLLPPAK 874
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFT 695
+E V+VD+ N G+DIN AI + A L +++GLGPRKA ++ +++ G + T
Sbjct: 875 LLRTMETVLVDIVNLCGVDINDAISDPREAALLPYVAGLGPRKATAVLKAINANGGVVNT 934
Query: 696 RKDFV------TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQ 749
R + V +G +V+ N F + S + A+ D LD TRIHP Y LA+
Sbjct: 935 RDELVGDPDSGKLQVVGPRVWNNCASFFII--SYEHATPEA--DPLDATRIHPMDYELAR 990
Query: 750 ELAKEVYNRDIEGDLND--DEDALEMAIEHV--RDRPDLLKTYLLDRHIKEKKREN--KR 803
++A + + D E D+ DE + + +R + L ++ + ++ +R+ K+
Sbjct: 991 KMAADALDMD-EEDIKAEVDEGGPPAVVRRLFKENRQETLYDLSMEDYAEQLERQGLLKK 1049
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAI 863
TLY IR E +++ R+ + + + D+ F M +GET+D+L E +V VR V+ AI
Sbjct: 1050 ATLYAIRGEFQSPYEELRHSFVQLTADQIFTMFTGETKDSLCEQMIVPVNVRVVKEDFAI 1109
Query: 864 CVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN 923
L+ G+ G + + S E+ L G K+ + + + + RE +R
Sbjct: 1110 VKLDCGIEGRIEAHEVSSRHTPREI---LQTGQTTRAKVLELNRKDFMCKMSVREDALRY 1166
Query: 924 -NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
R H + D + RQ E++ A ++ +R+I HP F++ + EA +
Sbjct: 1167 PYRKMHDHDRDNW-----DFRQEEKDAADLTEKDVVTGRAQRVIKHPMFKSFNSTEAEQY 1221
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L ++ PGE +IR SS+G +L +T KV DGV H D++E K+++ +G+TLK+
Sbjct: 1222 LGSQPPGELVIRSSSKGSDHLAITWKVADGVIQHIDVLELDKENE-----FALGRTLKVA 1276
Query: 1043 ED-TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFG 1101
T+ DLDE++ ++ + + ++ KF+KGS+++++ L PTR Y F
Sbjct: 1277 NKYTYSDLDELIVEHVKAMARKVDELMQSDKFQKGSRSDLERWLTTYMDANPTRSTYAFC 1336
Query: 1102 ISHEHPGTFILTY--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ +HPG F+L + RS+ + + P ++ + D+ L F+
Sbjct: 1337 LDTKHPGYFVLCFKASRSSKIGSWSVRVIPGAYEMMGSQYPDVRALCNGFK 1387
>gi|413945865|gb|AFW78514.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 585
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/298 (51%), Positives = 203/298 (68%), Gaps = 21/298 (7%)
Query: 9 LRKALAG-PPTDGESIVDESTWIYNQLL-SGTLPLFGQRGAGSPKEGHDLSISRDDIMRF 66
L + L G PPTD +I +ES+WI++ L G L FG E + I + DI+
Sbjct: 294 LSEELTGYPPTDKTTIEEESSWIHSHLTGDGFLSFFGN-------EHINKDIDQKDIVNV 346
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
+ +LH K +IPFIAMYRKE C +LL + +E N D D + L+WHK+LWA+ L
Sbjct: 347 VTMLHANKFEIPFIAMYRKESCPTLLS-FDSDEDNEDIESDARK---LRWHKLLWAVQAL 402
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D+KWLLLQKRK ALQ YY+KR+++E RRI D TR LN QL++SI ++L+ A++E+EV+D
Sbjct: 403 DRKWLLLQKRKVALQLYYEKRFDDEKRRIDDVTRQELNSQLYNSIIEALKDAKSEKEVED 462
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK 246
VD KFNLHFPPGEV +EGQ+KRPKR + YS C KAGLWEVA++FG S+EQLG L+L K
Sbjct: 463 VDAKFNLHFPPGEVE-EEGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGHHLTLTK 521
Query: 247 MGD--ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHM-----AAVEISCEPCVRKY 297
+ + ELE + +PEE+A+NF CAMF +SQ VL+GARHM + + C P + Y
Sbjct: 522 IPEAGELESGRHSPEEVAANFTCAMFETSQDVLRGARHMVFNRPTILTLFCTPSIPNY 579
>gi|226294480|gb|EEH49900.1| transcription elongation factor spt6 [Paracoccidioides brasiliensis
Pb18]
Length = 1362
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 290/1136 (25%), Positives = 501/1136 (44%), Gaps = 101/1136 (8%)
Query: 6 CRSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR 65
C+ RK E +E+ WI N L L +R +E SI++
Sbjct: 285 CQVARKQHKHVILTEEQFKEEAIWISN------LMLLKKRLDPDLREPFQRSIAK----- 333
Query: 66 FLDLLHLQKLDIPFIAMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + ++PFI +RK+ + K + + N D + + L LW I
Sbjct: 334 VLEFMITDDWEVPFIFQHRKDYLIHAAKVPVSPDPSNPDGPEYVVKAEKLLNMTDLWDIF 393
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREV 184
+ D K+ L +++ LQ Y +T ++ +F+S+ L A T E+
Sbjct: 394 EYDLKFRSLIDKRNTLQKTYDNL----------QTICNVHDDIFESM---LPLAVTMEEL 440
Query: 185 DDVDLKFNLHFPP-----------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGY 233
DV +P GE G + + K RS + +E+ FG
Sbjct: 441 QDVQEYLYFQYPTQLKDIAIVNGSGENGTSKQRRKATTRSFS-ERVRNSRAYELVRAFGI 499
Query: 234 SSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPC 293
+++ E EDP E P+ A N +F + L+ A+ M A EI+ P
Sbjct: 500 TADAFAQNALKEGKRQYTEDPVEPPDVTADNLLDDIFTNGGHALKAAKAMFAEEITMSPK 559
Query: 294 VRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KA 351
+RK +R F N ++ T G +D H + K+LR + L L ++ KA
Sbjct: 560 MRKVMRQAFYMNGIIECFRTEKGLKRVDEQHPYYEFKYLRNQQLTDIARRPELFLRMLKA 619
Query: 352 EEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
EEE L+ V ++ + + + H +SD S+ A WN +R+ ++ AL L M
Sbjct: 620 EEEGLVDVKVRF--QNFDNFKKNLYSHIVSDNFSELADAWNRERKEVVDMALGK-LERIM 676
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---P 468
+ + + ++ + E +A ++ PY+ K + PRVLA G
Sbjct: 677 SRGVKENIRTECENHVAKECREAFSLRLDQAPYKPKGMILG----TIPRVLALSNGNGIV 732
Query: 469 GKPETTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
GK + ++ G V++ G T L + + D ++ + P V+
Sbjct: 733 GKDPIYWAWVEEDGRVLE---NGKFTDLAPGDSGRMIADGKDVAAFVELVERRNPDVI-- 787
Query: 528 GAVNLSCTSLKDDIYEIIFKMVEE-------HPRDVGHEM-DELSIVYGDESLPRLYENS 579
G S + K +Y+ + +V + D E D L ++ ++ + RLY+ S
Sbjct: 788 GVSGFSPETRK--LYKQLSDLVSSKDLRGATYTNDYDEEANDLLEVIIVNDEVARLYQTS 845
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
+ + P VAL +YLQNP+ A+L GR+I+S + P + + D+
Sbjct: 846 ERAKMEHPSFAALTHYCVALAKYLQNPMKEYASL---GRDIVSIQFKPGQQLVPQDKILK 902
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKD 698
+E +VD+ N G+DIN A L ++ GLGPRKAA L + + + G + R +
Sbjct: 903 QLETALVDMVNLCGVDINEAATDTATANLLPYVCGLGPRKAAHLLKIINMNGGIVNNRIE 962
Query: 699 F--VTAH--GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
V AH +G KV+ N FL + S+ D LD+TR+HPE Y + +++A +
Sbjct: 963 LLGVNAHYPAMGVKVWNNCASFLYIDYD----STDPDADYLDNTRVHPEDYDIGRKMAAD 1018
Query: 755 VYNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLY 807
D E D+ + D ++ E +DR + L +++ + KR TL
Sbjct: 1019 ALELD-EEDIKAETDENGQGAIVRKLIKEDAQDRVNDLILEEYAEQLEKNLNQRKRATLE 1077
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
IR EL +++ R Q+ S D F M++GET ++LAEG +V +++RV L+
Sbjct: 1078 TIRAELQQPYEELRKQFVFLSTDAIFTMLTGETHESLAEGMIVPISIKRVTDDHIDGKLD 1137
Query: 868 SGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQ 927
G+ + + + +D + D + + KI + + +Q + RESE+ +
Sbjct: 1138 CGIDAVAGEVEITDRY-DIPIRSLFAPHQTVQGKILYLNRKLFQANVSLRESEISKPYRR 1196
Query: 928 HCQNLDPYY--HEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSA 985
H L + +E + R++ +EKA R+I HP F+ A +A + L+
Sbjct: 1197 HFDRLRGEWDDRQEDADREASREKAETSGRTM------RVIKHPLFRPFNAAQAEEFLAP 1250
Query: 986 KEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GED 1044
+ G+++IRPSS G +L +T KV +G+Y H DI+E K+++ +GK LK+ G
Sbjct: 1251 QSRGDAVIRPSSNGIDHLAVTWKVSEGIYQHLDILELDKENE-----FSVGKILKVGGRY 1305
Query: 1045 TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGF 1100
++ DLDE++ +I + + M+ + KF+ GSK++ I +++ PT I F
Sbjct: 1306 SYSDLDELIVNHIKAMAKKVDDMMMHEKFQDGSKSDTALAGHIHESQ-PTPICVCF 1360
>gi|448536686|ref|XP_003871170.1| Spt6 protein [Candida orthopsilosis Co 90-125]
gi|380355526|emb|CCG25045.1| Spt6 protein [Candida orthopsilosis]
Length = 1436
Score = 281 bits (720), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 261/1007 (25%), Positives = 458/1007 (45%), Gaps = 106/1007 (10%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFG-----YSSEQLGLQLSLEKMGDELEDPKETPEEM 261
+ R K + Y G+ A +FG SS+ + + D E P +++
Sbjct: 478 FDRIKSNILYDGVEAYGI--TAKQFGENVQDQSSQGFNVTYRIHATDDSQESPDFVIDKL 535
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
+ + A+F + R A EI P +R VRS F A +S T G + ID
Sbjct: 536 VDD-EEALFRDQKTAKDAIRRTFAEEIFHNPKIRHEVRSTFASFASISVAITEKGRNTID 594
Query: 322 SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL-LQVTIKLP---EDSLNKLFSDCKE 377
++ +A +K+ + + + ++ E EKL L V P ED +F+ K
Sbjct: 595 NYSPYADIKYAINRFPSELVQTPDVFLRMLEAEKLGLAVVTVEPRHFEDWFQSIFNCLK- 653
Query: 378 HYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV---------KEARSLMSGRAKSWLL 428
SDG S+ + WN +RE++L+ A L +MV +E L++ ++ +
Sbjct: 654 ---SDGSSEVSDQWNKEREIVLRLAFKK--LCAMVALNTKEDLRRECERLIASEVRTKFV 708
Query: 429 MEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFV--MLDSSGEVVD 486
+ +A + PY D P VLA +G G ++ V + SG+V D
Sbjct: 709 AKLDQAPFT-----PYGY-------DRGTKPNVLALTFGKGDYDSAVVGVFVKDSGKVQD 756
Query: 487 VLFTGCLTLRSQNVRDQQSKKNDQERL-------LKFMMDHQPHVVVLGAVNLSCTSLKD 539
+ + +RD +S++ +L LKF +P V+V+ N + L
Sbjct: 757 FFKSD-----TNPIRDSESEETFNGQLKEYFDKNLKF---DKPDVLVVSGFNANSKRL-- 806
Query: 540 DIYEIIFKMVEEHPRDVG-HEMDE------LSIVYGDESLPRLYENSRISSDQLPGQKGN 592
Y+I+ K V E+ V E+D+ +++++G + RLY+NS + P +
Sbjct: 807 --YDILTKFVAENGITVNIEEVDKSSQVPLINVIWGPDETARLYQNSERAKSDFPDKPQL 864
Query: 593 VKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQV 652
V+ ++ + +Y+Q+PL +L G++ILS + + D +E VD+ N
Sbjct: 865 VRYSIGVAKYVQDPLLEYISL---GQDILSLSFHEHQKLIPNDLVNEALESAFVDLVNVT 921
Query: 653 GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA--GAIFTRKDFVTAHGLGKKVF 710
G+DIN+A+ + LQ+I+GLGPRKA+ L R++V + R D + +F
Sbjct: 922 GVDINIAVRDSYVAQALQYIAGLGPRKASGLVRNIVNNLNSTLIARSDLIEEELTTANIF 981
Query: 711 VNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA 770
+N FL + Q + S ++LLD TRIHPE Y LA+++A + + D E D A
Sbjct: 982 INCASFLYIPVDNQVDTLSSAVELLDATRIHPEDYELARKVAADAIDMDEEDFAEDHSSA 1041
Query: 771 LE-MAIEHVRDRPDL-LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPS 828
++ + E V DL L Y + IK K+ K TL +I+ EL++ +++ R +++
Sbjct: 1042 IQKLYSEDVTKVNDLNLVEYGKELQIKLSKK--KFATLLMIKDELVNNYEELRRKFRIMD 1099
Query: 829 QDEEFYMISGETEDTLAEGRVVQATVRRV----QGQRAICVLESGLAGMLMKEDYSDDWR 884
E F M++GET + G VV T+ +V + A G+ +++ + +D
Sbjct: 1100 DVEVFTMLTGETRKSFGRGSVVPLTIVKVGKNYRDPTARIRFAKGVTSSMVQANIEEDKI 1159
Query: 885 DSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPY---YHEERS 941
S+L D + + I++ + V + R+ R + + + + + EE
Sbjct: 1160 PSDL-DLVQGQVVQAVVIEAFYDSFTSVMSLLRDDIKRASTPRIVKESNKWNFRAEEEDW 1218
Query: 942 SRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPS 1001
R+ E+EKA +LAK R I HP + N +A + L+ + G+ +IRPSS+GP
Sbjct: 1219 QREREKEKA----QLAKT----RNIQHPLYHNFNYKQAEEFLAPQSLGDCVIRPSSKGPK 1270
Query: 1002 YLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLV 1061
YLT+T KV + ++ H + E + G K + T+ DLD+++ ++I +
Sbjct: 1271 YLTITWKVGNNLFQHLSVQERTR---------GKFKEYVVDGKTYSDLDQLIFQHIQAIS 1321
Query: 1062 SHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY-IRSTNP 1120
+ M+ + KFR G+ AEV E L P Y F H++PG F+L + + P
Sbjct: 1322 RKVDEMVHHPKFRTGTMAEVTEWLESYTKANPKNSAYIFCYDHKNPGYFLLLFKVNVDTP 1381
Query: 1121 HHE-YIGLYPKGFKFRKRMFEDIDRLVAYFQ---RHIDDPQGDSAPS 1163
++ G+ + ++ + +L F+ + +P +APS
Sbjct: 1382 IKTWHVRTETDGYALKNFLYTSMTKLCNGFKQVFKSYSNPSSQAAPS 1428
>gi|452982844|gb|EME82602.1| hypothetical protein MYCFIDRAFT_135751 [Pseudocercospora fijiensis
CIRAD86]
Length = 1423
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 267/1078 (24%), Positives = 484/1078 (44%), Gaps = 97/1078 (8%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW + + D K+ +R+ A+Q + + E + ++FD + +
Sbjct: 384 LWDVFEQDLKYRAFAERRDAIQR---------NVELLKELETGFDDKVFDELIPDAAQLD 434
Query: 180 TEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWE---------VASK 230
+++ D L F ++ + E Q + + S G W+ +
Sbjct: 435 DLQDLQDY-LNFQYSIQLKDLSISEAQ----ENGGQKRSSGNRGFWDKVRSGPAYHLVRA 489
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPK-ETPEEMA-SNFKCAMFNSSQAVLQGARHMAAVEI 288
G +++Q+ + E +G D + ETPE++A S + + +S +++ GA+ M EI
Sbjct: 490 IGLTADQIAK--NAEGLGHTAPDDQGETPEKIADSLIRAPDYMTSTSIIDGAKLMMVEEI 547
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF---EDAQW 345
P +RKY+R I+ N + T G I H + K+LR + +R F +
Sbjct: 548 VTSPRMRKYMRQIYYKNLIFDCHRTEKGLKQISEDHPYYEFKYLRNQEVRNFLVERPELY 607
Query: 346 LLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN 405
L + KAE + L++V + L ++ + ++ + SD S+ A WN+ R I++ A+
Sbjct: 608 LRMLKAEADGLVEVRVNLKQEK--DIRANLEAAIQSDNFSQVADAWNELRREIIQLAMKK 665
Query: 406 F--LLPSMVK-----EARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
L+ VK E + ++G + A K+ PY+ K ++
Sbjct: 666 MHKLISKGVKDNLKNECENKIAGYCRD--------AFTTKLDQAPYKPKGMELG----TC 713
Query: 459 PRVLACCWGPGK--PETTFVMLDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLK 515
RVLA G G + ++ SG +VL G T LR + D + ++
Sbjct: 714 ARVLALSNGAGNRSDAICWAYVNESG---NVLENGKFTDLRPGKEDKYIPEGKDIQAFVE 770
Query: 516 FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFK-----MVEEHPRDVGHEMDELSIVYGDE 570
+ +P V+ + + L D+ EI+ K E P + D L +V +
Sbjct: 771 VVERRKPDVIAVSGWSTETYRLYQDLKEIVKKYELRGAPYEDPDEDREVSDPLEVVIPQD 830
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLEN 630
+ RLY ++ + P + VAL Y+QNPL A L R+I+S P +N
Sbjct: 831 EVARLYWSTPRAETDHPSLPPLARYCVALAHYMQNPLKEYAAL---KRDIVSVTFDPNQN 887
Query: 631 FLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA 690
L D+ +E MVD+ N VG+D+N A++ L F+ GLGPRKA +L +++
Sbjct: 888 LLPEDKLRRYLETAMVDIVNLVGVDLNEALNDPGTQNLLPFVCGLGPRKADNLIKAVAAN 947
Query: 691 GAIFTRKDFVTAHG-------LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
G T ++ + G + KVF N FL + Q D LD+TRIHPE
Sbjct: 948 GGEVTNRNDLLGIGEVSKRPAVSPKVFHNCASFLYI-----TWEDDQEADYLDNTRIHPE 1002
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDED------ALEMAIEHVRDRPDLLKTYLLDRHIKEK 797
Y +A+++A + D E + E+ ++ + DR + L ++ +
Sbjct: 1003 DYEIARKMAADALELDEEDIKAEQEENGVSGVVRKLVKDEHTDRVNDLVLEQYAEQLETQ 1062
Query: 798 KRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
+ KR TL IR EL + +++ R + + DE F ++GET D+L EG +V +V+R
Sbjct: 1063 FGQRKRATLETIRAELQNPYEELRRNFNWLTTDELFTQLTGETRDSLQEGMIVPVSVKRT 1122
Query: 858 QGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLH--EGDILTCKIKSIQKNRYQVFLV 915
L+ G+ G + + +Y ++ + + + ++ K+ I++ ++ L
Sbjct: 1123 FPDHIEVKLDCGIDGGISETEYPEEMAAKRIEPRQMWTQHQVIQAKLTFIERKKFTAQLT 1182
Query: 916 CRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFK-ERLIVHPCFQNV 974
RE EM+ + + + EE +Q E +K +K K + +R+I H F+
Sbjct: 1183 LREQEMKT----PFKRVFDHGMEEWDEQQEELDKKEAKKAAEKGQARHQRVIKHRLFKPF 1238
Query: 975 TADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVG 1034
+ +A++ L + G+ IIRPSS+G +L +T K+ + VY H D++E K+++
Sbjct: 1239 NSIQAIEALKTQGRGDCIIRPSSKGSDHLAVTWKIAEDVYQHIDVLELNKENE-----FS 1293
Query: 1035 IGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPT 1094
+GK LKIG+ T+ DLDE++ ++ + + M + +++ G+K D+ L P
Sbjct: 1294 VGKVLKIGKYTYSDLDELIVFHVQAMAKKVDEMTNDERYQSGTKEATDQWLTTYTEANPK 1353
Query: 1095 RIVYGFGISHEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
R +Y F + +PG F L + + H + + P+GF+ + + D+ L F+
Sbjct: 1354 RSMYSFCMWPNYPGHFYLCFKAGQEARLSHWPVKVIPQGFELKGNRYPDMRALKNGFK 1411
>gi|50418619|ref|XP_457828.1| DEHA2C03344p [Debaryomyces hansenii CBS767]
gi|74631854|sp|Q6BVE1.1|SPT6_DEBHA RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Chromatin elongation factor SPT6
gi|49653494|emb|CAG85873.1| DEHA2C03344p [Debaryomyces hansenii CBS767]
Length = 1439
Score = 278 bits (711), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 282/1226 (23%), Positives = 517/1226 (42%), Gaps = 135/1226 (11%)
Query: 19 DGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIP 78
+GE + E W+ N L ++G+ S G ++ + + ++ + ++P
Sbjct: 294 EGEELKSEQGWVANILF------MEKQGSFS---GFLEEPFKEAVSKVVEFISKDVYEVP 344
Query: 79 FIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKS 138
FI +R++ L E+ N++ L + LW I LD ++
Sbjct: 345 FIWTHRRDFLLY------SEEIKNEDGSVTNSVHKLLFEDDLWRIFQLDIEY-------- 390
Query: 139 ALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPG 198
S Y+KR E +L + L D + K +++ ET + D+ N +
Sbjct: 391 --HSLYEKRVNIE--------KLIESLNLDDDLVKDVKSLETMVAIQDLQDYINFTYST- 439
Query: 199 EV----------GVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS----- 243
E+ G+D K+ + + L++ + FG S+++ G +
Sbjct: 440 EIRKLYDDKETEGIDANITKKHSKYAIFERIKSNVLYDAVNAFGISAKEFGENVQDQSSK 499
Query: 244 -------LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
+ D +E P++ E + + + +F + L R A EI P +R
Sbjct: 500 KFEVPYRIHATDDHIESPEDLIERLCEDDEV-LFKDPKNALNAVRKTFAEEIFHNPKIRH 558
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
VR+ F D A + T G AID+ +A +K+ + +L++ E E
Sbjct: 559 EVRTTFKDFASIRVAVTEKG-KAIDNHSPYADIKYAINRSPADLVRNPDVLLRMLEAEAA 617
Query: 357 LQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVK-EA 415
V +K+ + F SDG S+ + WN +RE +L A L SMV
Sbjct: 618 GLVVVKVETKDYDSWFQCIFNCLKSDGSSEIFEKWNKEREFVLNMAFKR--LTSMVSMNT 675
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP---DEEAAPRVLACCWGPGKPE 472
+ + + + E + ++ P+ TP D+ P VLA +G G +
Sbjct: 676 KEDLRRECERLIASEVRRRFLARIDQAPF-------TPFGFDKGTKPNVLALSFGKGDFD 728
Query: 473 TTFV--MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF----MMDHQPHVVV 526
+ + L SG+V D F +RD++S+ +L +F + + +P V+V
Sbjct: 729 SAVIGAFLRESGKV-DEFFKS----EDNPIRDRESEDKFSGQLKEFFDKNLRNQKPDVIV 783
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS---------IVYGDESLPRLYE 577
+ N L D + + +V +EL+ +++G L++
Sbjct: 784 VSGYNAISKKLFDSVKSFV------ETNNVTANTEELTDVQNPPLIQVIWGQSETATLFQ 837
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
NS + + + K V L RY+Q+PL +L G ILS + ++ D
Sbjct: 838 NSERARIEFSDKPTLAKYCVGLARYVQSPLLEYLSL---GEGILSLTFFEHQKLISTDLV 894
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVR--AGAIFT 695
IE VD+ N VG++IN AI + L +++GLGPRKA+ L R++ +
Sbjct: 895 MEAIESAYVDIINMVGVEINEAIRDPYIAQLLPYVAGLGPRKASGLLRNINSKLGSTLAN 954
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
R D + +F+N FL + + ++LLD TRIHPE Y LA+++A +
Sbjct: 955 RSDLIENELSTANIFINCSSFLNIPYDEGLSMRDSSVELLDATRIHPEDYDLARKMAADA 1014
Query: 756 YNRDIEGDLNDDEDALEMAIEHVRD---RPDLLKTYLLDRHIKEKKRENKRETLYLIRRE 812
+ D E D+ E+ + + ++D + D L + ++ K + K TL I+ E
Sbjct: 1015 LDLD-EEDMAHVEEQGGIIYQLMQDGVNKVDDLNLTAYGKELESKFGKKKYATLQSIKEE 1073
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV-QGQRAICVLESGLA 871
L++ F++ R + E F+M++GET ++ +V TV +V Q R + A
Sbjct: 1074 LVNNFEEIRRSFHILESHEVFHMLTGETTESFTRNTIVPVTVNKVGQNFRDFENSKIKFA 1133
Query: 872 GMLMKEDYSDDWRDSELSD--KLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
+ + ++ + L +G ++ + + + E++++
Sbjct: 1134 KVTTSSFIQGNIEEASIPQGIDLAQGQVVQAVVLDAYYDSFTASFSLLEADIQ------- 1186
Query: 930 QNLDPYYHEERSSRQSEQEKARKEKELAKKH---FKERLIVHPCFQNVTADEAMKLLSAK 986
+ P +H++ E E+A K+KE+AK+ K R I HP F N + +A + L+ +
Sbjct: 1187 KGAAPKFHKDPLKWNFEAEQADKQKEMAKERAQLAKTRNIQHPLFHNFSYKQAEEFLAPQ 1246
Query: 987 EPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTF 1046
G+ ++RPSS+GP+YLT+T KV + ++ H I E + G+GK + +
Sbjct: 1247 AVGDCVLRPSSKGPNYLTVTWKVSNNLFQHLSIQENTQ---------GMGKEYIVEHKKY 1297
Query: 1047 EDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEH 1106
DLD+++ +++ + H+ M + KFR+G+ +EV+E L P Y F H+
Sbjct: 1298 ADLDQLIFQHVQAIAKHVDEMCRHPKFREGTMSEVNEWLESYTKANPKNSAYVFCFDHKA 1357
Query: 1107 PGTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSI 1164
PG F+L + + N ++ G++ + + + RL F++ A
Sbjct: 1358 PGWFLLLFKVNVNTPITTWHVKTECDGYRLKGFSYPSMLRLCNGFKQTFKSYVKGIADRS 1417
Query: 1165 RSVAAMVPMRSPANGGSTASAGSGWG 1190
RS +P N + AS G+G
Sbjct: 1418 RSTKP-----APVNNQAQASTYGGYG 1438
>gi|350596995|ref|XP_003484346.1| PREDICTED: transcription elongation factor SPT6-like, partial [Sus
scrofa]
Length = 748
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 188/629 (29%), Positives = 313/629 (49%), Gaps = 39/629 (6%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
F + +AVL+GAR+M A++I+ EP VR+ +R F + A ++ PT G +D H
Sbjct: 2 FPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSF 61
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDG 383
K+L+ KP+++ D Q+L I AE+E LL + I + + F + K+ Y D
Sbjct: 62 KYLKNKPVKELRDDQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDE 121
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
S Q WN QR + ++ AL FL M KE ++ + AK +++ + L+N + V P
Sbjct: 122 FSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAP 181
Query: 444 YQRKDNDITPDEE-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTL 495
Y R D + D++ RVL + + F +++ GEV D L T
Sbjct: 182 Y-RPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTK 240
Query: 496 RSQNVRDQQSKKNDQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
R R+++ +K Q E L KF+++ +PHVV + N L +D+ I+ H
Sbjct: 241 RRTAWREEEREKKAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HE 294
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
D G ++ + + D L LY NS+ S + +++AV+L R +Q+PL A +
Sbjct: 295 LDQGQQLSSIGVELIDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQV 354
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFIS 673
C +IL K PL+ + +E + ++ N+VG+D+N AI + A +Q++
Sbjct: 355 CSSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVC 414
Query: 674 GLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
GLGPRK L + L + + +R VT +G KVF+N GFL++ + S+ +I
Sbjct: 415 GLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYI 474
Query: 733 DLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDR 792
+HPE+Y A+++A + +E D + ++ A+E + + P+ LK LD
Sbjct: 475 XXXXXXXVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDA 530
Query: 793 HIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
+E +R+ +K TLY IR D R Y+ P+ +E F M++ ET +T G++
Sbjct: 531 FAEELERQGYGDKHITLYDIRAXXXXXXXDLRTAYRSPNTEEIFNMLTKETPETFYIGKL 590
Query: 850 VQATV-----RRVQGQ---RAICVLESGL 870
+ V RR QG+ +AI E+GL
Sbjct: 591 IICNVTGIAHRRPQGESYDQAIRNDETGL 619
>gi|341896102|gb|EGT52037.1| hypothetical protein CAEBREN_17429 [Caenorhabditis brenneri]
Length = 1521
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 228/841 (27%), Positives = 384/841 (45%), Gaps = 90/841 (10%)
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
++PFI YRKE +LL +NN LW ++D D+KW LQ
Sbjct: 364 FEVPFIGFYRKESIDNLLT------MNN-----------------LWTVYDFDEKWCHLQ 400
Query: 135 KRKSALQSYYKKR--YEEESRRIYDETRLALNQQLFD-SISKSLEAAETEREVDDVDLKF 191
+K+ L K+ Y+E S + + R L + S S +LE ++ D+ F
Sbjct: 401 GKKNKLYDLMKRMRVYQELSDDLTAKRRPITEMDLVEISFSDTLE------KLTDIHANF 454
Query: 192 NLHFPPGEVGVD--------------EGQYK---RPK-RSTKYSSCSKAGLWEVASKFGY 233
L + G + + E +Y+ RP R+ KY C + G+ E+A +FG
Sbjct: 455 QLLY--GNLLEEMTKWEKERRAEDETEPEYRAKFRPSIRNDKYQLCLENGIGELAGRFGL 512
Query: 234 SSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPC 293
+++Q L+ + E E +P + A + CA F+ + L GA+ M A EIS +P
Sbjct: 513 TAKQFAENLNYRRH--ETEQDTASPLDAADEYVCAAFSDKEMALNGAKFMLAKEISRQPL 570
Query: 294 VRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEE 353
VR+ VR F A PT G ID H ++++ KP+R+ ++L KA+E
Sbjct: 571 VRQSVRDKFRTYANFWVKPTKKGRETIDESHPLYDKRYIKNKPIRELTAEEFLYYHKAKE 630
Query: 354 EKLLQVTIKLPEDSLNKLFSDCKEHYLSDGV------SKSAQLWNDQRELILKDALDNFL 407
E L+ ++ D YLSD + +++ +LWN R+ +K A++ L
Sbjct: 631 EGLIDFIMQYESDEQRDRNEYLVNEYLSDSIFRRDEYTENVELWNTVRDDCVKLAINEML 690
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ---RKDNDITPDEEAAPRVLAC 464
+P + E + + AK+ + + + +++S YQ ++D + A R++A
Sbjct: 691 VPYIKDEVYNTLLEEAKTAVAKKCRREFASRISRAGYQPDRENEDDDDMENHGARRIMAV 750
Query: 465 CWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLL-KFMMDHQP 522
C+ + E +F VM+D +G +VD L T R + + K + L KF+ +P
Sbjct: 751 CYSTDRDEASFGVMVDENGAIVDYLRMVHFTKRKFGGGNTAALKAESMELFKKFLQRRRP 810
Query: 523 HVVVLGAVNLSCTSLKDDIYEII--FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSR 580
H + L ++ CT LK D+ E + + ++ P+ + + D ++Y S
Sbjct: 811 HAIGLNTEDMECTKLKRDLEEAVAELSIKKQIPKSI-------PVFLMDNEAAKVYMRSN 863
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
IS + P +++AV+L R L +P+ A L +I L PL+ + + +
Sbjct: 864 ISITENPDHPPTLRQAVSLARLLLDPIPEYAHLWNSDEDIFCLSLHPLQRDIDQEILAQV 923
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDF 699
+ +V+ N+ G+DIN LQF GLGPRKA SL +S+ I +R
Sbjct: 924 LNHELVNRVNEEGVDINKCAEFPHYTNMLQFTCGLGPRKATSLLKSIKANDNLIESRSKL 983
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD 759
V LG KVF+N GF+R+ + + ++++LD +R+HPE+Y A+++A + D
Sbjct: 984 VVGCKLGPKVFMNCAGFIRIDTHKVSDKTDAYVEVLDGSRVHPETYEWARKMAVDALEVD 1043
Query: 760 IEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHG 816
D A++ + + PD L+ LD E R+ K+ TLY I EL
Sbjct: 1044 DSADPT-------AALQEIMESPDRLRDLDLDAFADELNRQGFGEKKATLYDISSELSAR 1096
Query: 817 FQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMK 876
++D R ++EP E Y + + + G V TV+ VQ ++ L+ A LM
Sbjct: 1097 YKDLRKPFEEP-HGERLYDLLTRSGKEIKVGSKVLGTVQSVQYRK----LDRESADTLMP 1151
Query: 877 E 877
E
Sbjct: 1152 E 1152
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 166/314 (52%), Gaps = 17/314 (5%)
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
++GL G ++ S D+ L+ ++ K+ S+ K R+ V L C+ S++ N
Sbjct: 1199 FDNGLVGFCPNKNISSTRIDNPLT-RVKINQPYYFKVMSLDKERFSVTLSCKSSDLNNE- 1256
Query: 926 YQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSA 985
+ N+ + ++ + Q++ + K+K+ K R+ HP F+N++ +EA K+L +
Sbjct: 1257 -EAFDNVMYWDNDAYKADQADMKNELKKKKDVSTRVK-RVTNHPSFKNLSYEEATKMLDS 1314
Query: 986 KEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDT 1045
+ E IIRPS+ + L++T K++ +Y + + E KD + IG+ L +G +
Sbjct: 1315 MDWSECIIRPSANKDTGLSVTWKIHGQIYHNFFVKESAKDQ-----VFEIGRQLSVGGED 1369
Query: 1046 FEDLDEVVDRYIDPLVSHLKAMLSYRKF----RKGSKAEVDELLRIEKAEFPTRIVYGFG 1101
FEDLDE++ R++ P++ + ++R F + AEV+ +R ++ E R Y F
Sbjct: 1370 FEDLDELIARFVQPMIQVSHEITTHRYFFPDGTSENIAEVEAFVREKRREL-GRNPYVFS 1428
Query: 1102 ISHEHPGTFILTYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD-PQG 1158
S HP F+++Y+ +S HEY + P+G +FR++ F+ +DR++ YF+ + + P G
Sbjct: 1429 ASLRHPCQFMISYMFDQSERIRHEYFNIQPRGIRFRRQNFDSLDRMIGYFKSNFNKAPPG 1488
Query: 1159 DSAPSIRSVAAMVP 1172
PS S + P
Sbjct: 1489 AGRPSAPSQHSYRP 1502
>gi|302654453|ref|XP_003019033.1| hypothetical protein TRV_06934 [Trichophyton verrucosum HKI 0517]
gi|291182725|gb|EFE38388.1| hypothetical protein TRV_06934 [Trichophyton verrucosum HKI 0517]
Length = 1406
Score = 277 bits (708), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 286/1172 (24%), Positives = 515/1172 (43%), Gaps = 112/1172 (9%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R E ++++ L+ + ++PFI
Sbjct: 290 EQFREEAVWISN------LMLLKKRLDSDLHEPFQRAVAK-----VLEFMVTDDWEVPFI 338
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + +K + N D L LW I + D K+ L +++
Sbjct: 339 FQHRKDYLIHAVKIPIPDGGTNPDGGKYIVEAEKLLSMIDLWDIFEYDLKFRALIDKRNT 398
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDV------------ 187
LQ+ Y +T + ++F+ + L AA T E+ DV
Sbjct: 399 LQTTYDNL----------QTISNVKDEMFEEM---LPAAITMEELQDVQDYLYFQYSIEL 445
Query: 188 -DLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK 246
D+ GE G Q ++ T + + + + FG + + +
Sbjct: 446 KDMALATANHEGENGT-AAQRRKASTKTFFERVRNSRAYGLVRAFGITPDAFAQNVMETG 504
Query: 247 MGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA 306
++D E P +MA N + F++ ++ AR M A E++ P VRK +R F +
Sbjct: 505 RRQYIDDASEKPTDMADNLLDSSFSNGAHAMKAARTMFAEELTMSPRVRKVMRQAFYMSG 564
Query: 307 VVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKLP 364
V+ T G ID H + K+LR++ + L ++ KAEEE L+ + +
Sbjct: 565 VIECYRTEKGLKKIDEHHPYYEFKYLRDQQISDIARRPELFLRMLKAEEEGLVDIKVHFK 624
Query: 365 E-DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
+ D+ K L+ + + SD S+ A WN +R+ +L AL L M K + +
Sbjct: 625 DFDNFKKRLYPEIQ----SDNSSEVADAWNKERKDVLDLALSK-LEKIMSKGVKENIRSE 679
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFVMLD 479
++ + E + ++ PY+ K + PRVLA G G K + ++
Sbjct: 680 CENHVARECREVFSTRLDQAPYKPKGMILG----TIPRVLALTNGSGIVGKDPIYWTWVE 735
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
G V++ LTL + K D E ++ + +P V+ + + L
Sbjct: 736 EDGRVLEHGKFVDLTLGDPDRMIADGK--DVEAFVELVERRKPDVIGVSGQSPETRKLYK 793
Query: 540 DIYEIIFK-------MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGN 592
+ E++ +E +V D L +V ++ + RLY+ SR + PG
Sbjct: 794 QLSELVQAKDLRGAFYTDERDEEVS---DILEVVIVNDEVARLYQTSRRAEVDHPGFSLQ 850
Query: 593 VKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQV 652
+ V+L +YLQNP+ PG++ L P + L +E +VD+ N V
Sbjct: 851 SRYCVSLAKYLQNPMK------EPGQQ-----LIPQDKLLK------QLETALVDMVNLV 893
Query: 653 GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG----LGK 707
G+DIN A+ L ++SGLGPRKA+ L + + + G + +R + + + +G
Sbjct: 894 GVDINEAVSDVSTANLLTYVSGLGPRKASQLLKVINMNGGVVNSRMELLGVNAQYPAMGV 953
Query: 708 KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNRDIEGDL 764
KV+ N FL + + D LD+TR+HPE Y + +++A E+ DI+ +
Sbjct: 954 KVWNNCASFLYIDYDNADPDT----DYLDNTRVHPEDYDIGRKIAADALELDEEDIKAET 1009
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWR 821
+++ + D D + LL+ + ++ + KR TL IR EL +++ R
Sbjct: 1010 DENGQGAIVRKLIKEDAQDKVNDLLLEEYAEQLENNLNQRKRATLETIRAELQQPYEELR 1069
Query: 822 NQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSD 881
Q+ D F M +GET ++LA+G VV T++RV L+ G+ ++ + + +D
Sbjct: 1070 KQFVFLGTDAIFTMFTGETAESLAQGMVVPITIKRVSDDHIDGKLDCGIDALVPESEMTD 1129
Query: 882 DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERS 941
+ D + KI + + + + RE ++ N Y+ + LD E
Sbjct: 1130 RY-DIPVRSLYAPHQTTLAKITYLNRKSFVANVSLREDQV-NKPYR--RQLDHMRGEWDE 1185
Query: 942 SRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPS 1001
++ E ++A KEK + R+I HP F+ +A + L+ + G+ +IRPSS+G
Sbjct: 1186 DQEREDQEAMKEKTQTDQR-ALRVIKHPLFRPFNGRQAEEFLAPQSRGDVVIRPSSKGHD 1244
Query: 1002 YLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPL 1060
+L +T KV DGVY H D++E KD++ +G+ LKI G+ ++ DLDE++ ++ +
Sbjct: 1245 HLAVTWKVADGVYQHIDVLELDKDNE-----FTVGRILKIGGKYSYTDLDELIVNHVKAM 1299
Query: 1061 VSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN- 1119
+ M + K++ G+K + L P R Y F + +HPG F L +
Sbjct: 1300 ARKVDDMTVHEKYQSGTKEATEGWLTTYTTANPKRSAYAFCLDTKHPGYFHLCFKAGLKA 1359
Query: 1120 PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
P + + + + P+G++ ++ + D+ L F+
Sbjct: 1360 PLNSWPVKVIPQGYELQRTPYPDMRALCNGFK 1391
>gi|190349127|gb|EDK41721.2| hypothetical protein PGUG_05819 [Meyerozyma guilliermondii ATCC 6260]
Length = 1442
Score = 277 bits (708), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 240/955 (25%), Positives = 444/955 (46%), Gaps = 93/955 (9%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFG-----YSSEQLGLQLSLEKMGDELEDPKETPEEM 261
++R K + Y + G+ A FG SS+ + + D LE P++ E++
Sbjct: 481 FERIKNNVIYDGVAAYGI--SAKHFGENVQDQSSKGFMVPYRIHATDDRLESPEDLLEKL 538
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
+ + ++ +Q+ R + EI +P +R VRS F + A + T G ++ID
Sbjct: 539 CEDDEV-LYKDAQSAQTAIRKTFSEEIFHDPRIRAEVRSTFKNFASIRVVLTDKGRASID 597
Query: 322 SFHQFAGVKW---LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
+ FA +K+ L + L + D +L + AE++ L+ V +++ E ++ F
Sbjct: 598 NHSPFADIKYATGLTAEDLTRNPDL-YLRMLLAEKQALVVVRVEIRE--YDRWFQSIFNC 654
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV---------KEARSLMSGRAKSWLLM 429
SDG+S+ ++ WN +RE++LK A L +MV + L++G + L+
Sbjct: 655 LKSDGLSEISEAWNREREIVLKLAFKK--LTTMVALGTKEELRRSCERLVAGEVRRRFLV 712
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFV--MLDSSGEVVDV 487
+ +A + V D+ P VLA +G G ++ V + +G + ++
Sbjct: 713 KVDQAPFTPVGF------------DKGTKPSVLALSFGKGDYDSAVVGAFVQDNGRITEL 760
Query: 488 LFTGCLTLRSQN--VRDQQSKKNDQERLLKFMMDH-----QPHVVVLGAVNLSCTSLKDD 540
+S+N +RD+++ + +L +F DH +P V+ + N L D
Sbjct: 761 F-------KSENSPLRDRENDEKFAGQLKEFF-DHNLRSSKPDVIAICGYNAISKRLYDS 812
Query: 541 IYEII--FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVA 598
+ + + ++ + P D + +++G + RLY+NS + +L + VK V
Sbjct: 813 VRQFVETNQIAADVPEDSSESQQLIPVIWGQDETARLYQNSERAKAELSDKPTLVKYCVG 872
Query: 599 LGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINL 658
+ RY+QNPL +L G +I+S L ++ + D +E V VD+ N VG++IN
Sbjct: 873 VARYVQNPLLEYVSL---GEDIISLSLYEHQHLIPRDAVLEAVESVFVDIVNLVGVEINE 929
Query: 659 AIHREWQFAPLQFISGLGPRKAASLQRSLVR--AGAIFTRKDFVTAHGLGKKVFVNAVGF 716
Q L +++GLGPRKA+ L +++ G I R D + +F+N F
Sbjct: 930 VTSDSSQAVLLNYVAGLGPRKASGLIKNINSKLGGTITARSDLIEHELTSANIFINCSSF 989
Query: 717 LRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA--LEMA 774
L + + I+LLD TRIHPE Y LA+++A + + D E + +E +
Sbjct: 990 LNIPHDDGVSVRDTNIELLDATRIHPEDYDLARKMAADALDLDEEDMAHVEEQGGIIYQL 1049
Query: 775 IEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFY 834
++ ++ D L + ++ K + K TL I+ EL++ +++ R + E F
Sbjct: 1050 MQEGVNKVDDLNLTAYGKELETKFGKKKYATLQSIKEELVNNYEELRRSFHVLDAVELFQ 1109
Query: 835 MISGETEDTLAEGRVVQATVRRV------QGQRAICVLESGLAGML---MKEDYSDDWRD 885
M++GET T G +V T+ RV +G+ I L+ + ++ ++E + D
Sbjct: 1110 MLTGETTSTFCRGAIVPVTINRVGKNYGNRGEAHIRYLKVSTSSLIQGNIEESHVPPKAD 1169
Query: 886 SELSDKLHEGDILTCKIKSIQKNRYQ-VFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQ 944
E +G ++ + + + + F + E R + + + DP + +
Sbjct: 1170 YE------QGQVVQSVVLDVFHDTFTATFSLLEEDIKRADAPKFVK--DPLKWDMAA--- 1218
Query: 945 SEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLT 1004
E++K R+E + K K + + HP F N T +A + L+ + G+ ++RPSSRGP YLT
Sbjct: 1219 EEEDKQREEAKERAKLAKTKNVQHPLFFNFTFKQAEEYLAPQAVGDCVLRPSSRGPDYLT 1278
Query: 1005 LTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHL 1064
+T KV + ++ H I E +H K + + + DLD+++ +++ + H+
Sbjct: 1279 VTWKVANNLFQHLSIQE--VNHAGTKEYI-------VEHKRYADLDQLIFQHVQAIAKHV 1329
Query: 1065 KAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
AM + KFR+G+ +EV+E L P Y F H+ PG F+L + + N
Sbjct: 1330 DAMCRHPKFREGTLSEVNEWLESYTRANPKNSAYVFCYDHKSPGWFLLLFKLNVN 1384
>gi|224007547|ref|XP_002292733.1| SUPT6H,-like protein to suppressor of ty 6 [Thalassiosira pseudonana
CCMP1335]
gi|220971595|gb|EED89929.1| SUPT6H,-like protein to suppressor of ty 6 [Thalassiosira pseudonana
CCMP1335]
Length = 1304
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 271/1004 (26%), Positives = 458/1004 (45%), Gaps = 93/1004 (9%)
Query: 202 VDEGQYKRPKRST--KYSSCSKAGLWEVASKFGYSSEQLGLQL--SLEKMG----DELED 253
V++ + KR +R Y +C GL + KF ++G++L +L K D L
Sbjct: 272 VNKDKVKRSRRFDWDYYRTCVGEGLRGICYKFVLPPFRVGIKLEETLTKSTGFTYDRLVL 331
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
E+ A + M + L+G R++AA+E++ EP +R+++R I+ A ++T PT
Sbjct: 332 LSSAREDAAWDDNPEMMDP----LRGCRYVAAMELAHEPRIRRHLRDIYRAEACITTRPT 387
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLR-KFEDA--QWLLIQKAEEEKLLQVTIKLP--EDSL 368
G ID+FH++ G+ LR K ++ F A Q+L + KAE + V + LP D +
Sbjct: 388 AKGLQNIDAFHEYYGLHLLRNKHVKDHFPTACIQYLNLLKAERSGDITVQVHLPFVNDEM 447
Query: 369 NK----LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
+ L + Y+ + + WND+R ILK AL N+LLP E R + +
Sbjct: 448 DTGTPWLMEALERVYMP--ANGDTEEWNDERRKILKMALVNYLLPHFEAETRRDLRDAST 505
Query: 425 SWLLMEYGKALWNKVSVGPYQRK----DNDITPDEEAAPRVLACCWGPGKPETTFVMLDS 480
+ + L GPY+ +N + P V C K T +D
Sbjct: 506 RIGVEAAAQNLQALAMEGPYRPSYMLGENRFIVPTDDFPIVGVCSATDPKDGTFLAAIDE 565
Query: 481 SGEVVDVL-FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD 539
+GE D L G ++ S N R E+++ F+M +P +VV+ D
Sbjct: 566 NGESQDHLAIPGGTSITSDNAR---------EKVITFLMQTRPSLVVV----------DD 606
Query: 540 DIYEI---IFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA 596
+ +E F+M+ + D + + ++ D+++ +L+ S + P Q N+K A
Sbjct: 607 EDFEARMDSFRMMHPNVDDDDDVVWKCNVDIVDDNVAQLFGRSVRGKKEFPDQPVNLKVA 666
Query: 597 VALGRYLQNPLAMVATLCGP-------GREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+A R+ +NPL +A G E+L + PL+ L E+V+ +VT
Sbjct: 667 IATARWAKNPLCELAYTWSTASDAGVFGTEMLFMNIHPLQRLLPKPLLLRQYERVLCNVT 726
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFT-RKDFVTAHGLGKK 708
+VG+DIN A + L F+ GLGPRKA +L++S+ R G + + RK + LG
Sbjct: 727 AEVGVDINGACTYDHMHGMLSFVPGLGPRKANNLKQSVARIGGVVSSRKSLLAKRLLGPI 786
Query: 709 VFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIE-GDL--N 765
++ NA+ FLRVR + Q Q + LDDTR HP+ Y L Q+ A ++ +E GD N
Sbjct: 787 IYNNAIAFLRVRSTDQL--QDQMLHPLDDTRCHPDVY-LRQKWAVKIAVDALELGDSASN 843
Query: 766 DDED----ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWR 821
D +D AL +++ R+ + L I++ L +++ E F+D R
Sbjct: 844 DTDDYAISALRDVMQNSREEVEELDLDTFAEMIEQNGNGKWLSHLTMVKWEFRLPFEDPR 903
Query: 822 NQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSD 881
+ P+ ++ F +++GET+ TL G+ V V + + LE + G + + +D
Sbjct: 904 KPMEPPTHEKLFKLLTGETDATLCPGKEVTGKVVKNGDFGSQVKLEGDVPGFIPLRNLAD 963
Query: 882 DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN-----RYQHCQNLDPYY 936
D H G I+ I ++ + L + + + R LD +
Sbjct: 964 D----------HVGQIVNAIITEVKMDHMCCDLTLKLEDFKKKSSEWGRPASLPPLDNSF 1013
Query: 937 HEERS-SRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAK---EPGESI 992
E + S +++ KAR+E + K R HP F+N + E K L GE++
Sbjct: 1014 DREAALSIDADKAKAREEPPRSGK-VTRRACAHPAFRNASHSEVDKELREAGDAMVGEAL 1072
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPS++ L + V G +++E KD + IG L I + +E +DE+
Sbjct: 1073 IRPSNKSVDSLAVHWMVRPGCIKVIEVLEEDKD-----TDASIGNRLIIKREVYESIDEL 1127
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFIL 1112
+ RYI P+ ++ ++ +RKF + EVD + K P + Y S +PG L
Sbjct: 1128 LGRYIAPMNDRVEEVIHHRKFMDKLEDEVDAKIVEMKQAQPKGVFYHVCWSESYPGYVSL 1187
Query: 1113 TYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
+I + P + IG+ P GF + F +DRL+ F+++ P
Sbjct: 1188 RFIMNRTPRNHTIGITPDGFAWGSMNFNSMDRLLNAFKKNPGGP 1231
>gi|327306227|ref|XP_003237805.1| transcription elongation factor spt6 [Trichophyton rubrum CBS 118892]
gi|326460803|gb|EGD86256.1| transcription elongation factor spt6 [Trichophyton rubrum CBS 118892]
Length = 1340
Score = 273 bits (698), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 276/1100 (25%), Positives = 495/1100 (45%), Gaps = 100/1100 (9%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R E ++++ L+ + ++PFI
Sbjct: 290 EQFREEAVWISN------LMLLKKRLDSDLHEPFQRAVAK-----VLEFMVTDDWEVPFI 338
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + +K + N D L LW I + D K+ L +++
Sbjct: 339 FQHRKDYLIHAVKIPIPDGGTNPDGGKYIVEAEKLLSMIDLWDIFEYDLKFRALIDKRNT 398
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD--LKFNLHFPP 197
LQ+ Y +T + ++F+ + L AA T E+ DV L F
Sbjct: 399 LQTTYDNL----------QTISNVKDEMFEEM---LPAAITMEELQDVQDYLYFQYSIEL 445
Query: 198 GEVGVDEGQYKRP--------KRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
++ + ++R K STK + + + + FG + + +
Sbjct: 446 KDMALATTNHERENGTAAQRRKASTKTFFERVRNSRAYGLVRAFGITPDAFAQNVMETGR 505
Query: 248 GDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
++D E P +MA N + F++ ++ AR M A E++ P VRK +R F + V
Sbjct: 506 RQYIDDASEKPTDMADNLLDSSFSNGAHAMKAARTMFAEELTMSPRVRKVMRQAFYMSGV 565
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKLPE 365
+ T G ID H + K+LR++ + L ++ KAEEE L+ + + +
Sbjct: 566 IECYRTEKGLKKIDEHHPYYEFKYLRDQQISDIARRPELFLRMLKAEEEGLVDIKVHFKD 625
Query: 366 -DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
D+ K L+ + + SD S+ A WN +R+ +L AL L M K + +
Sbjct: 626 FDNFKKRLYPEIQ----SDNSSEVADAWNKERKDVLDLALSK-LEKIMSKGVKENIRSEC 680
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFVMLDS 480
++ + E + ++ PY+ K + PRVLA G G K + ++
Sbjct: 681 ENHVARECREVFSTRLDQAPYKPKGMILG----TIPRVLALTNGSGIVGKDPIYWTWVEE 736
Query: 481 SGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
G V++ LTL + K D E ++ + +P V+ + + L
Sbjct: 737 DGRVLEHGKFVDLTLGDPDRMIADGK--DVEAFVELVERRKPDVIGVSGQSPETRKLYKQ 794
Query: 541 IYEIIFK-------MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
+ E++ +E +V D L +V ++ + RLY+ SR + PG
Sbjct: 795 LSELVQAKDLRGAFYTDERDEEVS---DILEVVIVNDEVARLYQTSRRAEVDHPGFSLQS 851
Query: 594 KRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVG 653
+ VAL +YLQNP+ A+L GR+++S + P + + D+ +E +VD+ N VG
Sbjct: 852 RYCVALAKYLQNPMKEYASL---GRDVVSIQFRPGQQLIPQDKLLKQLETALVDMVNLVG 908
Query: 654 LDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG----LGKK 708
+DIN A+ L ++SGLGPRKA+ L + + + G + +R + + + +G K
Sbjct: 909 VDINEAVSDVSTANLLTYVSGLGPRKASQLLKVINMNGGVVNSRMELLGVNAQYPAMGVK 968
Query: 709 VFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDE 768
V+ N FL + + D LD+TR+HPE Y + +++A + D E D+ +
Sbjct: 969 VWNNCASFLYIDYDNADPDT----DYLDNTRVHPEDYDIGRKIAADALELD-EEDIKAET 1023
Query: 769 D-------ALEMAIEHVRDRPD--LLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQD 819
D ++ E +D+ + LL+ Y ++ + KR TL IR EL +++
Sbjct: 1024 DENGQGAIVRKLIKEDAQDKVNDLLLEEYA--EQLENNLNQRKRATLETIRAELQQPYEE 1081
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
R Q+ D F M +GET ++LA+G VV T++RV L+ G+ ++ + +
Sbjct: 1082 LRKQFVFLGTDAIFTMFTGETAESLAQGMVVPITIKRVSDDHIDGKLDCGIDALVPESEM 1141
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEE 939
+D + D + KI + + + + RE ++ N Y+ + LD E
Sbjct: 1142 TDRY-DIPVRSLYAPHQTTLAKITYLNRKSFVANVSLREDQV-NKPYR--RQLDHMRGEW 1197
Query: 940 RSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRG 999
++ E ++A KEK + R+I HP F+ +A + L+ + G+ +IRPSS+G
Sbjct: 1198 DEDQEREDQEAMKEKTQTDQR-ALRVIKHPLFRPFNGRQAEEFLAPQSRGDVVIRPSSKG 1256
Query: 1000 PSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYID 1058
+L +T KV DGVY H D++E KD++ +G+ LKI G+ ++ DLDE++ ++
Sbjct: 1257 HDHLAVTWKVADGVYQHIDVLELDKDNE-----FTVGRILKIGGKYSYTDLDELIVNHVK 1311
Query: 1059 PLVSHLKAMLSYRKFRKGSK 1078
+ + M+ + K++ G+K
Sbjct: 1312 AMAKKVDDMMVHEKYQSGTK 1331
>gi|146412169|ref|XP_001482056.1| hypothetical protein PGUG_05819 [Meyerozyma guilliermondii ATCC 6260]
Length = 1442
Score = 271 bits (694), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 243/953 (25%), Positives = 442/953 (46%), Gaps = 89/953 (9%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFG-----YSSEQLGLQLSLEKMGDELEDPKETPEEM 261
++R K + Y + G+ A FG SS+ + + D LE P++ E++
Sbjct: 481 FERIKNNVIYDGVAAYGI--SAKHFGENVQDQSSKGFMVPYRIHATDDRLESPEDLLEKL 538
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
+ + ++ +Q+ R + EI +P +R VRS F + A + T G ++ID
Sbjct: 539 CEDDEV-LYKDAQSAQTAIRKTFSEEIFHDPRIRAEVRSTFKNFASIRVVLTDKGRASID 597
Query: 322 SFHQFAGVKW---LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
+ FA +K+ L + L + D +L + AE++ L+ V +++ E ++ F
Sbjct: 598 NHSPFADIKYATGLTAEDLTRNPDL-YLRMLLAEKQALVVVRVEIRE--YDRWFQSIFNC 654
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV-----KEARSL----MSGRAKSWLLM 429
SDG+S+ ++ WN +RE++LK A L +MV +E R L ++G + L+
Sbjct: 655 LKSDGLSEISEAWNREREIVLKLAFKK--LTTMVALGTKEELRRLCERLVAGEVRRRFLV 712
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFV--MLDSSGEVVDV 487
+ +A + V D+ P VLA +G G ++ V + +G +
Sbjct: 713 KVDQAPFTPVGF------------DKGTKPSVLALSFGKGDYDSAVVGAFVQDNGRI--- 757
Query: 488 LFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDH-----QPHVVVLGAVNLSCTSLKDDIY 542
T L + +RD+++ + +L +F DH +P V+ + N L D +
Sbjct: 758 --TELFKLENSPLRDRENDEKFAGQLKEFF-DHNLRSSKPDVIAICGYNAISKRLYDSVR 814
Query: 543 EII--FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALG 600
+ + ++ + P D + +++G + RLY+NS + +L + VK V +
Sbjct: 815 QFVETNQIAADVPEDSSESQQLIPVIWGQDETARLYQNSERAKAELSDKPTLVKYCVGVA 874
Query: 601 RYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAI 660
RY+QNPL +L G +I+S L ++ + D +E V VD+ N VG++IN
Sbjct: 875 RYVQNPLLEYVSL---GEDIISLSLYEHQHLIPRDAVLEAVESVFVDIVNLVGVEINEVT 931
Query: 661 HREWQFAPLQFISGLGPRKAASLQR--SLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLR 718
Q L +++GLGPRKA+ L + +L G I R D + +F+N FL
Sbjct: 932 SDSLQAVLLNYVAGLGPRKASGLIKNINLKLGGTITARSDLIEHELTSANIFINCSSFLN 991
Query: 719 VRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA--LEMAIE 776
+ I+LLD TRIHPE Y LA+++A + + D E + +E + ++
Sbjct: 992 IPHDDGVLVRDTNIELLDATRIHPEDYDLARKMAADALDLDEEDMAHVEEQGGIIYQLMQ 1051
Query: 777 HVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMI 836
++ D L + ++ K + K TL I+ EL++ +++ R + E F M+
Sbjct: 1052 EGVNKVDDLNLTAYGKELETKFGKKKYATLQSIKEELVNNYEELRRSFHVLDAVELFQML 1111
Query: 837 SGETEDTLAEGRVVQATVRRV------QGQRAICVLESGLAGML---MKEDYSDDWRDSE 887
+GET T G +V T+ RV +G+ I L+ + ++ ++E + D E
Sbjct: 1112 TGETTSTFCRGAIVPVTINRVGKNYGNRGEAHIRYLKVSTSSLIQGNIEESHVPPKADYE 1171
Query: 888 LSDKLHEGDILTCKIKSIQKNRYQ-VFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSE 946
+G ++ + + + + F + E R + + + DP + + E
Sbjct: 1172 ------QGQVVQLVVLDVFHDTFTATFSLLEEDIKRADAPKFVK--DPLKWDMAA---EE 1220
Query: 947 QEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLT 1006
++K R+E + K K + + HP F N T +A + L+ + G+ ++RPSSRGP YLT+T
Sbjct: 1221 EDKQREEAKERAKLAKTKNVQHPLFFNFTFKQAEEYLAPQAVGDCVLRPSSRGPDYLTVT 1280
Query: 1007 LKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKA 1066
KV + ++ H I E +H K + + + DLD+++ +++ + H+ A
Sbjct: 1281 WKVANNLFQHLSIQE--VNHAGTKEYI-------VEHKRYADLDQLIFQHVQAIAKHVDA 1331
Query: 1067 MLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
M + KFR+G+ +EV+E L P Y F H+ PG F+L + + N
Sbjct: 1332 MCRHPKFREGTLSEVNEWLESYTRANPKNSAYVFCYDHKSPGWFLLLFKLNVN 1384
>gi|354548601|emb|CCE45338.1| hypothetical protein CPAR2_703510 [Candida parapsilosis]
Length = 1441
Score = 268 bits (685), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 246/1003 (24%), Positives = 452/1003 (45%), Gaps = 98/1003 (9%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFG-----YSSEQLGLQLSLEKMGDELEDPKETPEEM 261
+ R K + Y G+ A +FG SS+ + + D E P ++
Sbjct: 483 FDRIKSNILYDGVEAYGI--TAKQFGENVQDQSSQGFNITYRIHATDDSHEPPDFLINKL 540
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
+ + A+F + R A EI P +R VRS F A +S T G + ID
Sbjct: 541 VDD-EEALFRDQKTAKDAIRRTFADEIFHNPKIRHEVRSTFASFASISVSITEKGRNTID 599
Query: 322 SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLS 381
++ +A +K+ + + + ++ E E+L I + F S
Sbjct: 600 NYSPYADIKYAINRFPSELVQTPDVFLRMLEAEQLGLAVITVEPRDFENWFQSIFNCLKS 659
Query: 382 DGVSKSAQLWNDQRELILKDALDNFLLPSMV---------KEARSLMSGRAKSWLLMEYG 432
DG S+ + WN +RE++L+ A L +MV +E L++ ++ L +
Sbjct: 660 DGSSEVSDQWNKEREIVLRLAFKK--LCAMVALNTKEDLRRECERLIASEVRTKFLAKLD 717
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFV--MLDSSGEVVDVLFT 490
+A + PY D+ VL +G G ++ V + SG+V D +
Sbjct: 718 QAPFT-----PYGY-------DKGTKSNVLVLTFGKGDYDSAVVGVFVKDSGKVQDFFKS 765
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDH----QPHVVVLGAVNLSCTSLKDDIYEIIF 546
+ +RD +S++ +L +F + +P V+V+ N + L Y+I+
Sbjct: 766 D-----TNPIRDLESEETFSGQLKEFFDKNLKVDKPDVLVISGFNANSKRL----YDIVT 816
Query: 547 KMVEEHPRDVGHEMDE-------LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVAL 599
K V E+ V + E +++++G + RLY+NS + + P + V+ AV +
Sbjct: 817 KFVTENGITVNVDEIEKPEKIPLINVIWGPDETARLYQNSERAKLEFPDKPQLVRYAVGV 876
Query: 600 GRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLA 659
+Y+Q+PL +L G +ILS + ++ D +E VD+ N G+DIN+A
Sbjct: 877 AKYIQDPLLEYVSL---GEDILSLSFHEHQKLISNDLVNEALESAFVDIVNVTGVDINVA 933
Query: 660 IHREWQFAPLQFISGLGPRKAASLQRSLVRA--GAIFTRKDFVTAHGLGKKVFVNAVGFL 717
+ + LQ+++GLGPRKA+ L R+++ + +R D + + VFVN FL
Sbjct: 934 VRDSYIAQTLQYVAGLGPRKASGLVRNIINNLNSTLVSRSDLIQEGLMTANVFVNCASFL 993
Query: 718 RVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEH 777
+ S S ++LLD TRIHP+ Y +A+++A + + D+E D + D + AI++
Sbjct: 994 YIPVENVVDSLSDSVELLDATRIHPQEYDMARKIATDAIDMDLE-DFDGDATS---AIQN 1049
Query: 778 VRDRPDLLKTYLLD-----RHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEE 832
+ + D+ K LD + + EK TL +I+ ELI+ +++ R +++ E
Sbjct: 1050 LYN-DDVTKVNDLDLVGYGKELYEKSGRKSFTTLLMIKDELINNYEELRKRFRIMDDVEV 1108
Query: 833 FYMISGETEDTLAEGRVVQATVRRV----QGQRAICVLESGLAGMLMKEDYSDDWRDSEL 888
F M++GET + G +V T+ +V + + G+ +++ + +D S+L
Sbjct: 1109 FTMLTGETRKSFGRGSIVPLTIVKVGKNYRDPTSRIRFAKGVTSSMVQANIEEDKIPSDL 1168
Query: 889 SDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEE--RSSRQSE 946
+ + +Q ++VF S M R + P +E + + ++E
Sbjct: 1169 D---------LVQGQVVQAVVFEVFYESFTSVMSLLREDIKRASTPRIVKEGNKWNFRAE 1219
Query: 947 QEKARKEKELAKKHF-KERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTL 1005
++ R+EKE K K R I HP +++ +A + L+ + G+ +IRPSS+GP YLT+
Sbjct: 1220 EDDWRREKEKEKAQLAKTRNIQHPLYRSFNYKQAEEFLAPQNLGDCVIRPSSKGPKYLTI 1279
Query: 1006 TLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLK 1065
T KV + ++ H + E + G K + T+ DLD+++ ++I + +
Sbjct: 1280 TWKVGNNLFQHLSVEERTR---------GKFKEYVVDGKTYSDLDQLIFQHIQAISRKVN 1330
Query: 1066 AMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY-IRSTNPHHE- 1123
M+ + KFR G+ +EV E L P Y F H++PG F+L + + P
Sbjct: 1331 EMVHHPKFRAGTMSEVTEWLESYTKANPKNSAYIFCYDHKNPGYFLLLFKVNVDTPIKTW 1390
Query: 1124 YIGLYPKGFKFRKRMFEDIDRLVAYFQ---RHIDDPQGDSAPS 1163
++ G+ + ++ + +L F+ + +P APS
Sbjct: 1391 HVRTETDGYALKNFLYTSMTKLCNGFKQVFKTYSNPSNQPAPS 1433
>gi|219124143|ref|XP_002182370.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406331|gb|EEC46271.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1958
Score = 267 bits (682), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 291/1187 (24%), Positives = 483/1187 (40%), Gaps = 238/1187 (20%)
Query: 205 GQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQL-------------------S 243
G KR +R + Y +C GL + +F + ++G++L +
Sbjct: 688 GNRKRSRRFDRDFYRTCVAEGLRSICYRFLLAPNRVGIKLQDNITSGIFDFSKILPGEEN 747
Query: 244 LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVL------------------QGARHMAA 285
E GD L+ E S+F + S + VL +G R++AA
Sbjct: 748 TEGAGDPLKWVAPVIENDPSSFASELIGSGELVLLSSTGGGATDDAEAKDPLRGCRYVAA 807
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLR------K 339
+E++ EP +R +R++F +AV++T PT G IDSFH F G+ +R KP++ K
Sbjct: 808 MELAYEPRIRMVLRNLFRMHAVITTKPTKKGIDEIDSFHDFFGLHLIRNKPVKDHFPLDK 867
Query: 340 FEDA---------------------------QWLLIQKAEEEKLLQVTIKLP-------- 364
E + Q+L I KAEE + + LP
Sbjct: 868 VESSIRKADLGEEERRELDLEMQKREYDSCLQYLNILKAEESGDITSHVHLPLLEHLDDW 927
Query: 365 ----EDSL--------NKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
D L + L+++ ++ YL V WN +R +L+ AL+ FLLP
Sbjct: 928 YKIDTDQLLGRDNQDDSPLYNELEKVYLPPDVDTDQ--WNGERCKVLRFALNTFLLPQFE 985
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ------RKDNDITPDEEAAPRVLACCW 466
E R + A + + L GPY+ ++ + P E+ A V CC
Sbjct: 986 AELRRDLRDAATRIGVKMAAENLRKLAMEGPYRPASILHTENRFLYPTEDMAI-VGICCT 1044
Query: 467 GPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
GK T + GE D L T Q +E+++ F+M +P +V
Sbjct: 1045 ADGKDATYLASVTERGESNDFLAVPSGTKVDQG--------KMREKVVTFLMQCRPAAIV 1096
Query: 527 LGAVNLSCTSL--------------------------KDDIYEI---IFKMVEEHPRDVG 557
+G + L D+ +EI F+ ++ P
Sbjct: 1097 VGTSGGFESRLLTRKMGDLLKEAEQRWTNRYIQGEDEDDEAFEIRQAAFRQLQ--PSAHF 1154
Query: 558 HEMDE----LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA----- 608
+ DE ++ D+S+ +L+ S + P N+K A+A+ RY Q+PL
Sbjct: 1155 DDQDEGDWKCNVDLIDDSVAQLFGRSVRGRKEFPDFAVNLKCAIAVARYAQDPLGELTYA 1214
Query: 609 -MVATLCGP-GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
VA+ G G E+L + P++ L E+++ DVT +VG DIN A +
Sbjct: 1215 WSVASDAGAFGTEMLYLNIHPMQQLLPRTRLLREYERILCDVTAEVGTDINSACTFDHLR 1274
Query: 667 APLQFISGLGPRKAASLQRSLVRAG-AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
L F++G+GPRKAA+L+++L + G A+ R+D + +G V+ N V FLR+RR Q
Sbjct: 1275 GLLVFVAGMGPRKAANLKQTLSQLGSALSRRRDLLENRMIGPVVYNNLVAFLRIRRVDQL 1334
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYN------------------RDIEGDLNDD 767
QF+ LDDTR+HP+ Y K ++ RD+ + + +
Sbjct: 1335 VE--QFLHPLDDTRLHPDVYLRHNWAIKIAFDALEREDSKTKDAASIKALRDVMENSHHE 1392
Query: 768 EDALEMAIEHV-------------------------RDRPDLLKTYLLDRHIKEKKRENK 802
+ L MA + RD+ + L I++ K
Sbjct: 1393 VERLFMATKSEWEMNYGLTFNIKDWDPRVNVPKDMWRDKVEELDLEAFANMIEDTKLGRW 1452
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
L +I+ E + D R + S D F +I+GE++ +L G+ V V R +
Sbjct: 1453 HSHLEMIKWEFRLPYVDPRKPMEPVSSDRLFSLITGESDQSLRPGKEVTGKVVRNGDFGS 1512
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR 922
LE + + + SD+ ++ D + G I+T I ++K V + + + R
Sbjct: 1513 RVKLEGEIPAFIPLRNLSDEHVETA-EDIVAAGQIVTAVITMVKKEHMTVDMSLKMEDFR 1571
Query: 923 NN-----RYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFK--------------- 962
N R +D ++ +++ E R+E L
Sbjct: 1572 KNPSSWERPLSLPPIDVHFDLVAAAKIEEDNNKRREAHLEALQLSLGTKGADGEEGTGQR 1631
Query: 963 -------ERLIVHPCFQNVTADEAMKLLS---AKEPGESIIRPSSRGPSYLTLTLKVYDG 1012
R HP F+N DE + L A GE++IRPSS+ L + V +G
Sbjct: 1632 KRIGRVARRACTHPAFRNAKTDEITRELKEGGAAMVGEALIRPSSKNSDALAIHWVVKEG 1691
Query: 1013 VYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRK 1072
++IE +D ++ IG TLK+ ++ +DE++ RYI P+ ++ ++++RK
Sbjct: 1692 SIKVVEVIE-----EDKETEASIGNTLKVKSQSYGSIDELLGRYIAPMNDFVEELVNHRK 1746
Query: 1073 FRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF 1132
F + E+D L EK E P I Y H G L ++ STN IG+ P G+
Sbjct: 1747 FLDIPEDELDAKLVAEKKENPKSIPYSACWMENHAGYASLRFVSSTNARSHPIGISPTGY 1806
Query: 1133 KFRKRMFEDIDRLVAYFQRHIDDPQG--DSAPSIRSVAAMVPMRSPA 1177
+ F +DRL+ F++ +P+G S P I + A P +P+
Sbjct: 1807 TWGSNTFPSLDRLINAFKK---NPRGAVKSKPPISTPATTAPSVAPS 1850
>gi|358060746|dbj|GAA93517.1| hypothetical protein E5Q_00158 [Mixia osmundae IAM 14324]
Length = 2410
Score = 266 bits (680), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 275/1112 (24%), Positives = 485/1112 (43%), Gaps = 128/1112 (11%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEES------RRIYDETRLALNQQLFD---- 169
+W I+DL ++ + K AL+ + + R Y TR++ ++L D
Sbjct: 415 IWRIYDLSVQFKQFIEDKRALEEHIAAIEAQPDFTGAYLRDAY--TRISALEELADFREW 472
Query: 170 ---SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWE 226
SK LEA E + + GE +++ P T Y + +
Sbjct: 473 LSVRYSKELEAIEQDAAIAT----------EGEAVRSIRKWQTPHSDTLYERAKQTKIDN 522
Query: 227 VASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF---KCAMFNSSQAVLQGARHM 283
+A+ G + L EDP E P++ A F + FN + VL+ A+ +
Sbjct: 523 LAAASGTDPDLLMQDFEGSIRAHFAEDPDEAPDDYAEGFVDAQSPFFNRKEQVLEAAKAI 582
Query: 284 AAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID---SFHQFAGVKWLREKPLRKF 340
+ SC P ++ +R F++N VV+ T G ++ + +++L+ KP+ +F
Sbjct: 583 VVRQFSCNPIFKRILRKSFLENGVVNVRLTERGQEEMEGKPDLTEIYSMRYLKAKPVAQF 642
Query: 341 EDA---QWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWND-QRE 396
A ++L + AE + L++TI+LP ++ L ++ YL+D S A+ WN+ +RE
Sbjct: 643 LAADGPKFLHLIAAEAKGFLKITIELPAYAILDLQRRLQKVYLTDLTSTLAEDWNNLRRE 702
Query: 397 LILKDALDNFLLPSMVKE--------------ARSLMSGRAKSWL------------LME 430
+I F L + E +S + + +WL E
Sbjct: 703 IIELLTEGTFKLVEELTEINGKQETRVVRQQVTKSSVMLKMAAWLREHIIRTAEDAIARE 762
Query: 431 YGKALWNKVSVGPYQ--RKDNDITPDEE----------AAPRVLACCWGPGKPETTFVM- 477
L +++ PY + + + P E AP V A G G P+ V
Sbjct: 763 AADRLTERINCQPYLPLKYASSLIPAEHEISPPPLVRGQAPSVTAISHGTGDPKRDSVRI 822
Query: 478 --LDSSGEVVDVLFTGCLT-LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSC 534
LD G +V+ + LT LR RD+ S +QE L+KF++ H+P V+V+G S
Sbjct: 823 YHLDRLGHIVN---SETLTDLRESRERDKTSLTQNQEDLVKFLLAHKPDVIVVGGFTPSA 879
Query: 535 TSLKDDIYEIIFKMVEEHPRDVGHEMDELS------------IVYGDESLPRLYENSRIS 582
L ++ ++ E D S + + + + Y S +
Sbjct: 880 HRLFKEVQKVAQVATERLLADNREAQQYYSSNEHFAAAYAFDVTFIHDGPAQHYMTSERA 939
Query: 583 SDQLPGQKGNVKR-AVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI 641
+ P V R +AL RY Q+PL A + +++S KL P ++ + ++ +
Sbjct: 940 QHEFPKLTEPVARYCIALARYAQSPLLEYAAMRS---DLISAKLTPDQSMVPRNKLLIQL 996
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL-QRSLVRAGAIFTRKDFV 700
E+ +VD G+DIN + + L ++ GLGPRKA L +R L + G ++ R
Sbjct: 997 ERAIVDQVAVAGVDINRTFREPYYASLLPYVCGLGPRKARYLVERVLQKGGMLYNRAMLR 1056
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-------IDLLDDTRIHPESYGLAQELAK 753
+ G+ V+ N F+R+ S AA++ F D+LD TRI ++Y +A+++A
Sbjct: 1057 SRGIFGQNVWRNCHAFMRINYSEAAAATKSFEHDDPSKADILDSTRIDFDNYSIARKMAA 1116
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIR 810
+ ++D E DL D + +A ++ ++ LD E +R KR L L+
Sbjct: 1117 DALDKD-EEDLVDLHPSQPVADLIQSNQAHRIEELSLDDFATELERMFSTPKRLALGLVH 1175
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL-----AEGRVVQATVRRVQGQRAICV 865
EL + + R + P+ + F ++ T TL R++ T R I
Sbjct: 1176 DELKAPYMERRPPFPVPTVSDIFGALAHVTTKTLRLNMVLPTRIITHTTR----DEIIVR 1231
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
L+ G++G++ D D + + G + C ++ I +QV L R+S++ +
Sbjct: 1232 LDCGVSGVIAP-DRQHDSNQALRREHAQVGTTILCVVQEIDAENFQVSLSARQSDVLQAQ 1290
Query: 926 YQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSA 985
+ + + +S Q ++A ++K ++ R I H +++ + +A + LS
Sbjct: 1291 QAAKGSFEDPDFDTVASHQDRLDRAGRQKR--RQARINRNINHDSYRDFNSGQAEEYLSN 1348
Query: 986 KEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDT 1045
K G ++RPSSRG +L +T KV D +Y H IIE D S IG+ LKI
Sbjct: 1349 KPRGSCVVRPSSRGTDHLAVTWKVDDRIYQHLAIIE-----LDKPSEFAIGRKLKIENLE 1403
Query: 1046 FEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHE 1105
+ D+D+++ +I ++ ML++ KF KGSK ++ L+ P + YGF I E
Sbjct: 1404 YADIDDLIVHHIRATHRKVEEMLAHEKF-KGSKEALEYYLKNYVLARPDKAAYGFAIDKE 1462
Query: 1106 HPGTFILTYIRSTNPHHEY--IGLYPKGFKFR 1135
PG F+L ++ + N +Y + + P F+ R
Sbjct: 1463 KPGWFLLGFVFNKNTAVKYWPVRVIPGAFQLR 1494
>gi|339244661|ref|XP_003378256.1| putative transcription elongation factor SPT6 [Trichinella spiralis]
gi|316972853|gb|EFV56499.1| putative transcription elongation factor SPT6 [Trichinella spiralis]
Length = 1361
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 189/707 (26%), Positives = 326/707 (46%), Gaps = 121/707 (17%)
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPL 628
D L R+Y +S ++ + P +++A+++ R LQ+PL + L P EILS K P
Sbjct: 673 DPELARVYADSGPANQEFPTYSILLRQAISIARRLQDPLIEFSQLVTPDDEILSLKFHPS 732
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
+N ++ +E I + ++ ++VG+D+N I + LQF+ GLGPRKA+ L + L
Sbjct: 733 QNMVSKEELIQRITEEFINRVSEVGVDVNRCIEHPYTAPLLQFVCGLGPRKASHLLKILT 792
Query: 689 -RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
+ R VT +G KVF+N GF+++ + S FID+LD +R+HPE+Y
Sbjct: 793 PEELHLENRSKLVTHCRMGPKVFMNCAGFIKIDTARMMDKSGVFIDVLDGSRVHPETYEW 852
Query: 748 AQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRE 804
A+++A + D + DD D A++ + + P+ LK LD +E +R+ NK
Sbjct: 853 ARKMAFDALEYD---ETVDDYDP-GTALDEILESPERLKDLDLDAFAEELQRQGFGNKNI 908
Query: 805 TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQR--- 861
TLY IR EL H ++D R Y P++++ FYM+ ET T G+++ A V V +R
Sbjct: 909 TLYDIRAELNHRYKDLRALYHPPTREQLFYMLIKETPRTFGPGKLIMAKVLNVVYKRPSP 968
Query: 862 -------------------AICV-----------------------------LESGLAGM 873
IC LE+G+AG
Sbjct: 969 NMFEEARPVKDSTTNLWQCPICFKDDFPELGEVWKHYDANECPGQAIGVRVRLENGIAGF 1028
Query: 874 LMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLD 933
+ + Y D ++ ++++ G + C+I I R+ L CR S++ + +Q+ D
Sbjct: 1029 IPIK-YLSDRHVNDPNERVKSGMTIACRIMKIDTYRFSCDLTCRTSDLEDREFQYGTGRD 1087
Query: 934 PYYH---EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGE 990
+Y EE ++ E + K + K R+I HP F+N T EA +LL + G+
Sbjct: 1088 NHYDFKAEEEDRKKEETARMMKNDDAIYK----RVIAHPSFRNCTCSEAEELLDQMDEGD 1143
Query: 991 SIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLD 1050
+IIRPSS+ +EDLD
Sbjct: 1144 AIIRPSSK----------------------------------------------VYEDLD 1157
Query: 1051 EVVDRYIDPLVSHLKAMLSYRKFRKGSKAEV----DELLRIEKAEFPTRIVYGFGISHEH 1106
E++ R++ P+ ++ +L+Y+ +R + + + L+ ++ +I Y ++
Sbjct: 1158 EILARFVHPVAMSVREVLTYKYYRDSNGGDTQILENSLVEEKQKNGGNKIPYSLSACKDY 1217
Query: 1107 PGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRS 1166
PG F+L+Y+ +T HEY P GF+FR R+F +++ L+A+F++H ++P PS
Sbjct: 1218 PGKFLLSYLPNTRVRHEYFTALPDGFRFRGRVFNNLNNLLAWFKQHFNEPPPGYTPSQYD 1277
Query: 1167 VAAMVPMRSPANGGSTASAGSGWGGSTNEGGW--NRDRSSTPGSRTG 1211
+ + +P G+ + W G T + + +S PG G
Sbjct: 1278 SLNRMGIVTPR--GAVGIGTNAWNGGTRPMIYLPSPSQSGFPGQSPG 1322
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 177/412 (42%), Gaps = 53/412 (12%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I L + ++PFIA YRKE LK K LW
Sbjct: 226 IREVLGFIRNMDYEVPFIAFYRKEHVQPYLK-----------------------MKDLWK 262
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKR--YEEESRRIYD--ETRLALNQQLFDSISKSLEAA 178
I+ D +W +++K L+ ++ Y+ + +R D L +++ DS L +A
Sbjct: 263 IYHCDAQWCNNREKKHLLKQQLERMRDYQLQLKRQSDGGTDELVCGREIRDSDFDVLSSA 322
Query: 179 ETEREVDDVDLKFNLHF-------PPGEVGVDE-GQYKRPKRSTKYSSCSKAGLWEVASK 230
+T E++D F L++ ++ ++ G++K+ ++Y+ + G+ +A K
Sbjct: 323 DTVEELNDWYAFFMLYYSRLYRTRANEQIDLERAGKFKQAAGYSQYAQLLEVGIGGLADK 382
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC-AMFNSSQAVLQGARHMAAVEIS 289
FG ++EQ L + +E+ P ++ E+A + + +VL+GA+ M A+ +
Sbjct: 383 FGLTAEQFAENLEVGYCRNEVTQPSQSAREVAEQYIVECLLPDVDSVLKGAKWMVAMRFA 442
Query: 290 CEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
P VR+ VR + VS T G S ID H K+L+ KP+R ++ ++L ++
Sbjct: 443 RNPIVRRIVREQYRQRVTVSVRATMHGRSLIDEAHPLYTCKYLKNKPVRLLKNDEYLRLK 502
Query: 350 KAEEEKLLQVTIKLP-----------EDSLNKLFSDCKEHYLSDG------VSKSAQLWN 392
+AEE L+ + + E +LF DG ++ A+ WN
Sbjct: 503 EAEESHLINMIFSIDGSESKRTTYYNELLQQQLFHRVGLFDFVDGLEIFKYLNSVAEEWN 562
Query: 393 DQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY 444
R LK LD+ L P +E R + A+ ++ + + + + PY
Sbjct: 563 SLRHEALKQCLDDMLYPIFEREVRLQLQREAEEHVIEKCANRMQEWLRIAPY 614
>gi|255731502|ref|XP_002550675.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131684|gb|EER31243.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 1422
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 239/949 (25%), Positives = 426/949 (44%), Gaps = 80/949 (8%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFG-----YSSEQLGLQLSLEKMGDELEDPKETPEEM 261
Y+R K + Y + + G+ A +FG SS+ + + D E P+E + +
Sbjct: 468 YERIKSNILYDAVNAYGI--TAKQFGENVQDQSSKGFEVPYRIHATDDSWESPEELIQRL 525
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
A + + MF + R A EI P +R+ VR + ++ T G + ID
Sbjct: 526 AQDDEI-MFKDEKIARDAVRKTFAEEIFHNPRIRQEVRQTYKMYTSINFVVTEKGRATID 584
Query: 322 SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLS 381
+ +A +K+ + +L++ E EKL I + N F + S
Sbjct: 585 NHSPYADIKYAINRDPVDLVTKPDVLLRMLEAEKLGLGVIVVETRDYNSWFESIFNCFKS 644
Query: 382 DGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
DG S ++ WN +RE++L+ A K+ S+++ K L E + + N+V
Sbjct: 645 DGSSDVSERWNKEREVVLRMAF---------KKLCSMVALNTKEDLRRECERLIANQVKR 695
Query: 442 GPYQRKDNDITPDEE------AAPRVLACCWGPGKPETTF--VMLDSSGEVVDVLFTGCL 493
G R D P + + VL+ +G G ++ V + +G++V L +
Sbjct: 696 GLVNRIDQ--APLQAFGFEFGSTANVLSITFGKGDFDSAVIGVYMRDNGKIVHTLKSNEN 753
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
+R++ D K E+ +P V+V+ N + L Y+II +V E+
Sbjct: 754 PIRNRETEDV-FKGWFLEQYDNLFRSEKPDVIVVSGFNANTKKL----YDIICNIVAENK 808
Query: 554 RDVGHEMDE-------LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
DE + +++G + RLY+NS +S + P + VK A+ALGRY+Q+P
Sbjct: 809 LGTSAVKDEYDDNSAPVQVIWGQDETARLYQNSERASKEFPDKPPLVKYAIALGRYVQDP 868
Query: 607 LAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
L TL G +ILS P + + D IE VD+ N VG+ IN A
Sbjct: 869 LLEYVTL---GDDILSLTFHPHQKLIPTDLIKESIESAFVDMVNLVGVKINDATRSTRVS 925
Query: 667 APLQFISGLGPRKAASLQRSLVR--AGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
+Q++ GLGPRKA+ L R++ G + R + + +F+N L V
Sbjct: 926 QMMQYVGGLGPRKASGLLRNINSHLYGVLVNRSALIESELTSANIFINCASSLNVVVDKT 985
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEH-VRDRPD 783
SS I++LD TRIHPE Y LA+++A + D E + ++D + ++D P+
Sbjct: 986 ITSSDYGIEVLDSTRIHPEDYDLAKKMASDALGIDEEDAMVMNQDGRGGVVRQLIKDDPE 1045
Query: 784 LLKTYLL---DRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
L + L + ++E+ + K TL IR+ELI+ +++ R ++ + D+ F++++GE
Sbjct: 1046 KLNSLDLVSFAQRLEERSHKKKLRTLQAIRQELINRYEEARQPFRILNNDDAFFILTGEH 1105
Query: 841 EDTLAEGRVVQATVR----------RVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSD 890
L V V+ RV+G R I S + G + D +
Sbjct: 1106 AYELRNTVVPITIVKISKNYNDPYGRVKGMRVIT--PSLIQGRI-------DEGQIPQNI 1156
Query: 891 KLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKA 950
+ EG ++ + + + + L R+ +++ Q+ + E +E+A
Sbjct: 1157 EYQEGQVVQGVLLELYTDSFTAVLSLRKEDIKRAMAPSVQHQYGKWDFEAQDADIAKERA 1216
Query: 951 RKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVY 1010
++ +LAK R + HP F+N +A + L+ ++ G+ +IRPSS+GP +LT+T KV
Sbjct: 1217 KENAKLAKT----RNVQHPLFRNFNFRQAEEYLAPQKVGDCVIRPSSKGPQFLTITWKVA 1272
Query: 1011 DGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSY 1070
++ H + E + G + + ++DLD+++ ++I + ++ +M+
Sbjct: 1273 PTLFQHLLVEERSR---------GRSREYYVEGQRYQDLDQLIFQHIQVIAKNVSSMVHN 1323
Query: 1071 RKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
KFR+G+ V+E L P Y F H+ PG F+L + ++N
Sbjct: 1324 GKFREGTMTVVNEWLESYTRANPKSSAYAFCYDHKSPGNFLLLFKINSN 1372
>gi|320582079|gb|EFW96297.1| Transcription elongation factor [Ogataea parapolymorpha DL-1]
Length = 1441
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 269/1071 (25%), Positives = 491/1071 (45%), Gaps = 87/1071 (8%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAE 179
LW I LD + L ++K ++ +K + +YDE +++A+
Sbjct: 418 LWRIVQLDIDFYALLEKKKNIEKQFKSL--DTVDTLYDEY---------------IDSAK 460
Query: 180 TEREVDDVD--LKFNLHFPPGEVGVDE--GQYKRPKRSTKYSSCSKAGLWEVASKFGYSS 235
T E+ D+ L F E+ +E G+ K + + ++EV K G ++
Sbjct: 461 TVTELQDLQEYLSFTYSARQRELYPEETKGKQKSHSKYKIFERIKSDPVYEVIDKIGINA 520
Query: 236 EQLGLQLSLEKMGDELEDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPC 293
E+ G + ++D + +++ S K + F++ + +HM + ++ P
Sbjct: 521 EKFGENVFTNNKIYLVDDIDKKADDLISECVEKGSFFDTVEKASNAIKHMFSEQLFHNPK 580
Query: 294 VRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEE 353
+R ++R F A V T G I +A K+ +PL F L ++ E
Sbjct: 581 LRAHLRLAFQSYASVDIKLTEKGRLKITESSPYADFKYAINRPLESFTLQPDLFLRMLEA 640
Query: 354 EKLLQVTIKLPEDSLNKLFSDCKEHYL----SDGVSKSAQLWNDQRELILKDALDNFLLP 409
E L V I + L F++ +H SDG S + WN R L AL L+P
Sbjct: 641 ESLGLVKIDI---GLKNAFANFADHLFTFLSSDGTSDLSNSWNSLRRECLDMALKK-LIP 696
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG 469
S+V + + + + L E ++ KV P+ + + + P+VLA G G
Sbjct: 697 SIVLDVKEKLRDTCERLLFYEIRESFMEKVDQAPF----HPLPTAKGTVPKVLAITNGDG 752
Query: 470 KPETTF--VMLDSSGEVVD-VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
K ++ V +D G V D + F QN R +K E + KF +P VV
Sbjct: 753 KRDSAIIAVAMDYDGTVFDHIKF-------EQNHRHGDFEKQFLEIVRKF----KPEVVA 801
Query: 527 LGAVNLSCTSLKDDIYEII--FKMVEEHPRDVGHEMDE--LSIVYGDESLPRLYENSRIS 582
+ + N+ + L + +I+ + E D +E D L ++Y RLYE+S +
Sbjct: 802 VSSYNVEVSHLFRKLQDIVRLNNLTVEIDVDEEYEGDPIPLPVIYVPNETSRLYEHSDRA 861
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE 642
+++ + + + + RY+Q+PL L G + S + +N L + I+
Sbjct: 862 AEEFSDKPVVARFCIGVARYVQSPLLEYMAL---GDAVTSISVHKHQNLLPTHKVKEAID 918
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTA 702
+ VDV VG+ IN A+ + LQ+I+GLGPRKA+SL R + G R+D +
Sbjct: 919 TIFVDVACLVGIKINDAVRSPYLSTMLQYIAGLGPRKASSLIRGIEANGGSLLRRDELIV 978
Query: 703 HGLGKKV-FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIE 761
L KV F+N F+ + + ++LLD TRIHPE Y LA+++A + + E
Sbjct: 979 RELSTKVVFMNCAPFIELPVPDRPDKD---VELLDATRIHPEDYELARKMASDALDLSEE 1035
Query: 762 GDLNDDEDA----LEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGF 817
+++ ++ E V DLL D+ E+ KR TL +I+ EL + +
Sbjct: 1036 EKQEIEQEEGGVISKLYDEGVEKLDDLLLEGYADQ--LEEHGHRKRATLEMIKEELQNNY 1093
Query: 818 QDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKE 877
++ R + S+DE F M++GE+++ G++V ++RV + + V +SG++ + +
Sbjct: 1094 EELRKSFHILSEDEVFEMLTGESKELFQRGKLVSVILQRVDNRFMLGVTQSGISCNISRS 1153
Query: 878 DYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY--QVFLVCRESE--MRNNRYQHCQNLD 933
+ + ++ L K G + ++++ + ++ L+ R+ E R + Q L
Sbjct: 1154 NALEYGDNTNLLTKYQNGQAVQAVVQTVDYANFKAELSLLKRDIEEASRGKKVDKFQGLW 1213
Query: 934 PYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESII 993
+ E ++ A+++++ K++ +R+I HP F N A EA L++K GE +I
Sbjct: 1214 DFEAER-------EDLAKEQEKEKKENSTKRVIKHPYFHNFNAREAEDYLASKNNGEFVI 1266
Query: 994 RPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVV 1053
RPSS+G +LT+T K+ + ++ H D++E K + +G+TL++GE + DLDE++
Sbjct: 1267 RPSSKGNDHLTVTWKIENQLFQHLDVLELDKLND-----YTVGRTLQVGEFRYHDLDELI 1321
Query: 1054 DRYIDPLVSHLKAMLSYRKFRKGSKAEVDE-LLRIEKAEFPTRIVYGFGISHEHPGTFIL 1112
+I+ L ++ ++++ KF+ + E L+R KA R Y F +H+ PG F L
Sbjct: 1322 VSHINNLYLKVEEIVNHDKFKNEPLNDTKEWLIRYSKAN-KNRSCYCFCYNHKSPGWFYL 1380
Query: 1113 TYIRSTNPHHEY---IGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDS 1160
+ + Y I + P G+ ++ D+ L F++ + + S
Sbjct: 1381 LFKLNDKSDKLYTWNIKVQPNGYLLHGNLYPDMVHLCNGFKKLLQNQMSSS 1431
>gi|321462643|gb|EFX73665.1| hypothetical protein DAPPUDRAFT_57945 [Daphnia pulex]
Length = 1029
Score = 263 bits (672), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 243/909 (26%), Positives = 408/909 (44%), Gaps = 121/909 (13%)
Query: 26 ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRK 85
E+ WIY S + +G PK + + I L+L+ Q L++ FIA YRK
Sbjct: 89 EADWIYKHAFSKSS--ISNQG---PK-------TVEKIRNALELIRNQHLEVIFIAFYRK 136
Query: 86 EECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYK 145
E L P L + LW ++ D+KW LQ RK+ + +K
Sbjct: 137 EYVL----------------------PELSVYD-LWKVYKFDEKWTQLQTRKNNMMRLFK 173
Query: 146 KRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGV 202
K + +S ++ ++ + L D +L ++ E+ DV F L+ E +
Sbjct: 174 KTQKYQSEKLTQNLTKSVPENVRVLKDEDIDTLRMVQSIEELSDVYNHFTLYHANDEPAL 233
Query: 203 DEGQYKRPKRSTK----------------------------YSSCSKAGLWEVASKFGYS 234
E + + K YS C++AGL + K+G S
Sbjct: 234 LEEYRRNEREEAKERRSSAARRRLNDLGEDLRDPDDVDDDFYSLCARAGLDCMIKKYGLS 293
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
EQL + E+E P ++A + F ++ VL+ A +M AV+I+ EP V
Sbjct: 294 PEQLAENMRDNYQRHEVEQTSREPLDVALEYVSPKFPNAAEVLKAANYMLAVQIAKEPLV 353
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
R+ VR F + A + PT G ID H +K+L++KP+R D Q+L + AE++
Sbjct: 354 RQCVRESFFERARIDVIPTTKGWKEIDENHNLYPIKFLKDKPVRYLVDDQFLRLMVAEQD 413
Query: 355 KLLQVTI--KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
KLL + K+ + K + D SK Q WN QR I+ AL F+ PS+V
Sbjct: 414 KLLTIVFPTKIEGAKTASYVDEIKALFTRDESSKLVQEWNVQRNEIIDLALSKFVFPSLV 473
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP-DEEAAPRVLACCWGPGKP 471
KE ++ + ++ ++ L+N + V PY+ +D D + RVL +G +
Sbjct: 474 KELKAKLLNESQEFVKRACCHQLYNWLKVAPYKVNFDDKEDWDTKDGFRVLGLSYGADEG 533
Query: 472 ETTFVMLDSSGE------VVDVL-----------------FTGCLTLRSQNVRDQQSKKN 508
+++ GE ++++L TG R+ +D+ K+
Sbjct: 534 ALC-CLINVDGECSNQIRLINILKGKNADKEKDGTGKEKDRTGKEKDRTGKEKDRTGKEK 592
Query: 509 D---QERLLK----FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
D +E+ LK F+ +PH + + A + +L E + M+ E +D
Sbjct: 593 DGTGKEKNLKMLKNFISSEKPHAIAVSAKSREAITL----VEYLRAMISELVKDENWPTI 648
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREIL 621
+ +V D SL +++ S + + P + ++ A+++ R LQ+PL + L +IL
Sbjct: 649 NVELV--DNSLAKVFAKSTQAESEFPQRPLLLREAISIARQLQDPLVEYSQLFNADEDIL 706
Query: 622 SWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAA 681
+ ++N L+ +E I V+ N+ G+DIN AI LQFI GLGPRKA
Sbjct: 707 ELEFHSMQNQLSKEELLEEINLEFVNQINESGVDINRAIKYPRTAHLLQFICGLGPRKAD 766
Query: 682 SLQRSL-VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRR-----SGQAASSSQFIDLL 735
L ++L + + R TA +G VF N GF+++ +G+ + SQ +++L
Sbjct: 767 DLIKTLKLNNKRLENRSQLKTACHMGVNVFTNCAGFIKIDTHLSGDAGRLPAESQ-VEVL 825
Query: 736 DDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIK 795
D +R+HPE Y A+ A E D++ A++ + + P+ L +D
Sbjct: 826 DGSRVHPEIYDWARRFAVAALEYHGEKDVDP-----WGAVKKILEAPERLIGLDVDALAA 880
Query: 796 EKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQA 852
+ +R+ NKR TLY IR EL H ++D R+ Y+ PS ++ F M++ ET T G++V A
Sbjct: 881 DLERQGFGNKRNTLYDIRSELNHLYKDGRSSYRPPSDEDIFNMVTKETSQTFFIGKMVLA 940
Query: 853 TVRRVQGQR 861
TV Q ++
Sbjct: 941 TVTGFQRRK 949
>gi|344299602|gb|EGW29955.1| transcription elongation factor SPT6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1454
Score = 263 bits (671), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 246/965 (25%), Positives = 426/965 (44%), Gaps = 101/965 (10%)
Query: 209 RPKRSTKYSSCSKAG---LWEVASKFGYSSEQLGLQLS------------LEKMGDELED 253
+ K+ +KY+ + L++ +G S+++ G + + D LE
Sbjct: 475 KSKKHSKYALFERIRSNILYDAVKAYGISAKEFGENVQDQSSKGFEVPYRIHATDDSLES 534
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
P++ + + + + +F R A EI P +R VR + A +S T
Sbjct: 535 PQDLIDRLIEDDEI-LFKDENTARDAIRRTFAEEIFHNPKIRHEVRQTYKSFASISIAIT 593
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
G + ID + +K+ + LL++ E E L V +K+ + F
Sbjct: 594 EKGRTTIDMNSPYEDIKYAINRSPSDLVRQPDLLLRMLEAESLGLVVVKVETKDYDSWFQ 653
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV---------KEARSLMSGRAK 424
SDG S + WN +RE++L+ A L SMV +E L++G +
Sbjct: 654 CIFNCLKSDGSSDISDRWNKEREVVLQLAFKK--LCSMVALNTKEDLRRECERLIAGEVR 711
Query: 425 SWLLMEYGKALWNKVSVGPYQRKDNDITP---DEEAAPRVLACCWGPGKPETTFV--MLD 479
L +V PY TP D P VLA +G G+ ++ V ++
Sbjct: 712 RRFL--------TRVDQAPY-------TPYGFDRGTKPNVLALTFGKGEFDSAVVGVLIK 756
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQ-------ERLLKFMMDHQPHVVVLGAVNL 532
SG+V D F +RD+Q+++ Q +R LK++ +P V+V+ N
Sbjct: 757 ESGKV-DEFFKS----ERNPMRDRQNEEEFQGELKEYFDRNLKYV---KPDVIVISGYNA 808
Query: 533 SCTSLKDDIYEI-----IFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
+ L D I I V++ P + L++++G + RLY+NS + + P
Sbjct: 809 NSKKLYDCIKNFVETNRITCNVDDLPTSIAAP-PLLNVIWGQDETARLYQNSARAKQEFP 867
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ +K A+ L RY QNPL +L G +ILS + ++ D +E V VD
Sbjct: 868 DKPTLIKYAIGLARYTQNPLLEYVSL---GDDILSLNFYQHQKLISNDLIKEALESVFVD 924
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVR--AGAIFTRKDFVTAHGL 705
+ N VG++IN A+ + L ++ GLGPRKA+ L R++ + R D V
Sbjct: 925 IVNMVGVEINEAVRDNYIAQLLPYVCGLGPRKASGLIRNINSKLGSTLVNRNDLVLGELT 984
Query: 706 GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLN 765
G +F N FL + + + ++LLD TRIHPE Y LA+++A + + D E
Sbjct: 985 GAIIFNNCSSFLNIPFNEGSTIRDISVELLDATRIHPEDYDLARKMAADALDLDEEDTTA 1044
Query: 766 DDEDA---LEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRN 822
+E+ L++ E V ++ D L + ++ K K TL +I+ EL++ F++ R
Sbjct: 1045 MEENGGIILQLMQEGV-NKVDELNLIAYGKELETKFGRKKYATLQMIKEELVNNFEELRR 1103
Query: 823 QYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV--------QGQRAICVLESGLAGML 874
+K E F M++GET DT + VV TV +V Q Q I ++ G+ +
Sbjct: 1104 SFKVLDSIEVFQMLTGETPDTFGKNVVVPLTVTKVGKSFQNYDQSQTRIRFIK-GVTSSM 1162
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
++ + ++ + +G ++ + + L E++
Sbjct: 1163 VQCNIEEEKIPK--GTNIEQGQVIQAVTIDVFYESFSANLSLLPDEIKRASMSRVVKEGG 1220
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ + +EKAR+ +LAK R + HP ++N +A + L+ + G+ +IR
Sbjct: 1221 KWDFQAEEEDINREKARENAKLAKT----RNVQHPLYKNFNYKQAEEYLAPQNVGDCVIR 1276
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVD 1054
PSS+GP +LT+T KV + ++ H I E K+ K V G + DLD++V
Sbjct: 1277 PSSKGPQFLTITWKVANNLFQHLLIEE--KNQGRFKEYVVEGF-------KYADLDQLVF 1327
Query: 1055 RYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++I + ++ M+ + KFR+G+ EV+E L P Y F H+ PG+F+L +
Sbjct: 1328 QHIQAIAKKVEDMVRHPKFREGALTEVNEWLESYTRANPKSSAYVFCYDHKLPGSFLLLF 1387
Query: 1115 IRSTN 1119
+ N
Sbjct: 1388 KVNVN 1392
>gi|402225129|gb|EJU05190.1| hypothetical protein DACRYDRAFT_19769 [Dacryopinax sp. DJM-731 SS1]
Length = 1619
Score = 261 bits (666), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 204/694 (29%), Positives = 338/694 (48%), Gaps = 48/694 (6%)
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
I+Y + + R+Y+NS ++ + G + VAL RY+QNPL A L G +I K
Sbjct: 913 IIYVPDEVARIYQNSARAAQEFGGLSVIARYCVALARYVQNPLNEFAAL---GEDIAIVK 969
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
L + L + + +E+ +V V N+VG+DI +H + L+F+ G+GPRKA +
Sbjct: 970 LDDDQKLLPKPKLFSAMERALVTVVNKVGVDIMRCVHDAYYQHLLRFVCGMGPRKAQGIV 1029
Query: 685 RSLVR-AGAIFTRKDFVTAHGLGKKVFVNAVGFLRV-RRSGQAASSSQFID----LLDDT 738
LV+ G++ R F+ LG VFVNA FL + + SG+ + ++ ID LD+T
Sbjct: 1030 AKLVKKGGSVENRARFIKDDMLGWHVFVNAAAFLFIPQESGRISRKAKEIDDQPDPLDET 1089
Query: 739 RIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDR---HIK 795
RIHPE Y LA+++A + + D E +ND A+ + D L LD ++
Sbjct: 1090 RIHPEDYELARKMATDALDLDEEDFVNDHPSAVVAQLMQDDDAAKKLDDLSLDDFAINLL 1149
Query: 796 EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVR 855
E+ ++ KR TL +++ EL+H + + R + P + M++GET TL GR VQA V
Sbjct: 1150 ERLQDRKRYTLDMLKEELLHPYGEKRAPFAVPDDWQIMTMLTGETRRTLYIGRPVQAIVY 1209
Query: 856 RVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLV 915
R++ A L+SG+ ++ + SDD + D L +G + + I ++ V L
Sbjct: 1210 RLKQHLAFARLDSGIEALINQSYLSDD-TSKRIDDLLSKGQAINGMVIGITPSQLHVELA 1268
Query: 916 CRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVT 975
++S + + +NL + + E + +K +E+ + R+I HP F
Sbjct: 1269 TKQSALEEAHPLYPKNLIEDFDLAQHQHDQEALQRKKRREI---NATRRIIKHPLFSKFN 1325
Query: 976 ADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDI--IEGGKDHKDIKSLV 1033
A +A + L+ + G+ IIRPSS+GP +L +T KV +G++ H D+ +G D
Sbjct: 1326 AGQAEQALANRPNGDVIIRPSSKGPDHLVVTWKVENGLFQHIDVWDPDGSNDQS------ 1379
Query: 1034 GIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAE-VDELLRIEKAEF 1092
G+G L +GE + DLDE++ ++ + + ++ + KF KGS + VD R +F
Sbjct: 1380 GVGHRLVVGEYVYTDLDELLVSHVGAMAKRVSDLMEHEKFFKGSSPDRVDAERRQYLTDF 1439
Query: 1093 ----PTRIVYGFGISHEHPGTFILTYIRSTN-PHHEY-IGLYPKGFKFRK-RMFEDIDRL 1145
P + +Y FG+ +HPG F++ ++ + N P + I + P+G++ + L
Sbjct: 1440 VMANPNKSIYTFGLDRQHPGYFVVDFMVNKNIPMQTWPIKVTPRGYRLLDGGEVPSVPEL 1499
Query: 1146 VAYFQ-RHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSS 1204
F+ R++ Q + R R+P G+T G S G+ R S
Sbjct: 1500 CNAFKMRYVQ--QSSQVGTGRPSGG----RTPYGAGTTPYGAGGLTPSARTPGY-RTSSH 1552
Query: 1205 TPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRG 1238
P RT N Y G S P PYG R
Sbjct: 1553 LPVGRTP-NPY-------GGTSHTPNPYGQTPRA 1578
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 160/348 (45%), Gaps = 25/348 (7%)
Query: 205 GQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASN 264
G+ KRP R + Y + + +A FG L+ + + +P+ +P +A
Sbjct: 501 GKMKRPTRQSAYEVARASTVSGLADSFGMPPADAILRFLAKGIQPPPHEPEISPTALAEQ 560
Query: 265 FKCAMFNSS-QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSF 323
F + F + +L+ AR + A E +P +R+ VR + +AVVST PT G ID +
Sbjct: 561 FAPSSFTGQPEELLEKARFILATEFGRDPLLRQAVRQKYEKDAVVSTRPTEQGIVKIDEY 620
Query: 324 HQFAGVKWLREKPLRKFE-DAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSD 382
H + +K++ +KP+ + + +L + AE+ LL + I LP LN+ +D + Y SD
Sbjct: 621 HPYFRIKYMNKKPIHRLTTNTLFLQVLAAEQAGLLTIDISLPPPVLNEFQNDLYKAYASD 680
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
S+ A WN+ R +++ +A+ +L+P VK R + + L + L ++
Sbjct: 681 RFSEVALAWNELRRMVIDEAMKKYLMPCGVKWMREWLREEEEDNLSEAVTEMLERRLDAA 740
Query: 443 PYQRK---DNDITPDEEAAPRVLACCWGPGKPE--TTFVMLDSSGEVVDVLFTGCLTLRS 497
PY+ K D D P V+A G G+ + V LD G + + + +
Sbjct: 741 PYKTKYMEDGD-------TPSVIAVSIGKGEAQDAVVAVYLDDDGRMRE-------STKF 786
Query: 498 QNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
N+RD+ QE +F+ +P + + + +++ +++
Sbjct: 787 DNLRDESC----QEEFRQFVKRRKPDAIGVAGFSTHTRRRMEEVQKLV 830
>gi|68481638|ref|XP_715187.1| hypothetical protein CaO19.7136 [Candida albicans SC5314]
gi|77023178|ref|XP_889033.1| hypothetical protein CaO19_7136 [Candida albicans SC5314]
gi|116256792|sp|Q3MNT0.1|SPT6_CANAL RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Chromatin elongation factor SPT6
gi|46436798|gb|EAK96154.1| hypothetical protein CaO19.7136 [Candida albicans SC5314]
gi|76573846|dbj|BAE44930.1| hypothetical protein [Candida albicans]
Length = 1401
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 239/952 (25%), Positives = 429/952 (45%), Gaps = 88/952 (9%)
Query: 203 DEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK-MGDEL-------EDP 254
+E Q ++ + Y + L++ +G ++++ G + + G E+ +DP
Sbjct: 442 EETQNRKHSKFALYERIRENVLYDAVKAYGITAKEFGENVQDQSSKGFEVPYRIHATDDP 501
Query: 255 KETPEEMASNF---KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC 311
E+P++M +F + R A EI P +R VRS + A +S
Sbjct: 502 WESPDDMIERLIQDDEVIFRDEKTARDAVRRTFADEIFYNPKIRHEVRSTYKLYASISVA 561
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
T G ++ID+ FA +K+ + +L++ E E+L V IK+
Sbjct: 562 VTEKGRASIDAHSPFADIKYAINRSPADLIAKPDVLLRMLEAERLGLVVIKVETKDFANW 621
Query: 372 FSDCKEHYL-SDGVSKSAQLWNDQRELILKDALDNFLL-------PSMVKEARSLMSGRA 423
F DC + L SDG S ++ WN +R+ +L+ A+ + +E L++ +
Sbjct: 622 F-DCLFNCLKSDGFSDISEKWNQERQAVLRTAISRLCAVVALNTKEDLRRECERLIASKV 680
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFV--MLDSS 481
+ LL K+ P+ DI + VLA +G G ++ V +
Sbjct: 681 RHGLLA--------KIEQAPFTPYGFDIG----SKANVLALTFGKGDYDSAVVGVYIKHD 728
Query: 482 GEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
G+V F S+N + + K ++ F D P VVV+ N + L D
Sbjct: 729 GKVSR--FFKSTENPSRNRETEDAFKGQLKQF--FDEDETPDVVVVSGYNANTKRLHD-- 782
Query: 542 YEIIFKMVEEHPRDVGHEMDE-----LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA 596
+++ V E+ V E D+ + +++G + RLY+NS + + P + VK A
Sbjct: 783 --VVYNFVSEYGISVKSEFDDGSSQLVKVIWGQDETARLYQNSERAKKEFPDKPTLVKYA 840
Query: 597 VALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDI 656
++LGRYLQ+PL TL G +ILS + ++ D ++E VD+ N VG+DI
Sbjct: 841 ISLGRYLQDPLLEYITL---GDDILSLTFHEHQKLISNDLVKEVVESAFVDLVNAVGVDI 897
Query: 657 NLAIHREWQFAPLQFISGLGPRKAASLQRSLV-RAGAIFT-RKDFVTAHGLGKKVFVNAV 714
N ++ L+++ GLGPRKA+ + R++ + G++ T R + + +F+N
Sbjct: 898 NESVRDSRLAQTLKYVGGLGPRKASGMLRNIAQKLGSVLTTRSQLIEYELTTRTIFINCS 957
Query: 715 GFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMA 774
L++ + I++LD TRIHPE Y LA ++A + + D E +L++ ++
Sbjct: 958 AALKISLNKSINVKDFEIEILDTTRIHPEDYQLAMKMAADALDMDEESELHEKGGVIKEL 1017
Query: 775 IEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFY 834
+E+ + +LL I + + K +L IR ELI GF + R+ ++ + ++ F+
Sbjct: 1018 LENDPSKLNLLNLNDFANQIYKLTHKLKFRSLQAIRLELIQGFAEIRSPFRILTNEDAFF 1077
Query: 835 MISGETEDTLAEGRVVQATVRRVQGQ--------RAICVLESGLAGMLMKEDYSDDWRDS 886
+++GE L + V+ AT+ +V R + V+ L + E+ RD+
Sbjct: 1078 ILTGEKPQML-KNTVIPATITKVTKNHHDPYARIRGLKVVTPSLIQGTIDENAIP--RDA 1134
Query: 887 ELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE----MRNNRYQHCQNLDPYYHEERSS 942
E ++ + + + L R + M+ + D +E
Sbjct: 1135 EYVQGQVVQAVVL----ELYTDTFAAVLSLRREDISRAMKGGVVREYGKWDYKAEDEDIK 1190
Query: 943 RQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSY 1002
R EKA++ +LAK R I HP ++N +A + L+ + G+ +IRPSS+G SY
Sbjct: 1191 R----EKAKENAKLAKT----RNIQHPFYRNFNYKQAEEYLAPQNVGDYVIRPSSKGASY 1242
Query: 1003 LTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVS 1062
LT+T KV + ++ H + E + G K + T+EDLD++ ++I +
Sbjct: 1243 LTITWKVGNNLFQHLLVEERSR---------GRFKEYIVDGKTYEDLDQLAFQHIQVIAK 1293
Query: 1063 HLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++ M+ + KFR+G+ + V E L P Y F H+ PG F+L +
Sbjct: 1294 NVTDMVRHPKFREGTLSVVHEWLESYTRANPKSSAYVFCYDHKSPGNFLLLF 1345
>gi|444318099|ref|XP_004179707.1| hypothetical protein TBLA_0C03870 [Tetrapisispora blattae CBS 6284]
gi|387512748|emb|CCH60188.1| hypothetical protein TBLA_0C03870 [Tetrapisispora blattae CBS 6284]
Length = 1448
Score = 256 bits (654), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 263/1090 (24%), Positives = 475/1090 (43%), Gaps = 87/1090 (7%)
Query: 54 HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT 113
+DL+ ++ I + + L++PFI YR+ N +++ N D F
Sbjct: 364 YDLTEFKEAIGNAVKFISQDNLEVPFIYAYRR------------NYISSKNKDGF----- 406
Query: 114 LKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK 173
+ LW I LD ++ + ++ + ++YK+ L +N D +
Sbjct: 407 VLSEDDLWDIVSLDIEFHSIISKREYVHNFYKE--------------LNVNDLTIDEYFR 452
Query: 174 SLEAAETEREVDDVDLKFN-LHFP-PGEVG----VDEGQYKRPKRSTKYSSCSKAGLWEV 227
+ A T E++ + +N + F P E+ + Q K+ +++ Y + L+EV
Sbjct: 453 NQNTA-TVAELNSLQDIYNYIEFKYPQEINELLMKESSQGKKHLKNSSYEKFKSSPLYEV 511
Query: 228 ASKFGYSSEQLGLQLSLEKMGDELED-----PKETPEEMASN--FKCAMF-NSSQAVLQG 279
+ G +++++G +S + + D P+E E++ N + +F N++ L+
Sbjct: 512 IKEVGITADKIGENISAQHQINIPTDHDSKKPQEVVEDIIKNNPSELQIFSNNTNLALET 571
Query: 280 ARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW-LREKPLR 338
+ ++EIS VR VRS F + T G I + +K+ + P+
Sbjct: 572 VQKYFSLEISKNTKVRDKVRSDFYKFYLADVVLTSKGKREIQRGSLYEDIKYAINRTPMH 631
Query: 339 KFEDAQ-WLLIQKAEEEKLLQVTIKLPEDS--LNKLFSDCKEHYLSDGVSKSAQLWNDQR 395
D +L + +AE LL V + + S ++ LF E + S+ A WN R
Sbjct: 632 FRRDPDIFLRMIEAESLNLLNVKLHISSQSQYIDHLFQTALE---TTNTSELANEWNKFR 688
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY--QRKDNDITP 453
+ I ALD + + +E + ++ + + K+ P+ KD I
Sbjct: 689 KTIFNQALDT-IFNDISREIKEDLAKTCEKLVAKSVRHKFMTKLDQAPFIPNLKDPKI-- 745
Query: 454 DEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERL 513
PRVL G G+ + ++ D + + N D+ + + L
Sbjct: 746 -----PRVLTITCGEGRFGSDAIIAVFVNRKTDFVKDFKIV---DNPFDRTHAEKFENTL 797
Query: 514 LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLP 573
+ + QP+V+ + N + E+I K R GH + IVY D+ +
Sbjct: 798 DDIIQNCQPNVIGINGPNPKTQRFYKKLQEVIHKKQIVDSR--GHA---VPIVYVDDEIA 852
Query: 574 RLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLT 633
Y++S S + P + VK +AL RY+ +PL A L G +LS P ++ L
Sbjct: 853 VRYQHSERGSQEFPNKPPLVKYCIALARYMHSPLLEYANLDKDG--LLSLTFHPHQSLLP 910
Query: 634 PDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA- 692
+ +E VD+ N VG+++N A + + L++ISG GPRKA SL R
Sbjct: 911 REVLRKTLESAFVDIVNLVGVEVNKATDNPYYASTLKYISGFGPRKAIDFLESLQRLNEP 970
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQEL 751
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA ++
Sbjct: 971 LLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLATKV 1030
Query: 752 AKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKR---ENKRE 804
A + D + +E A+ IE +RD PD L++ L+ + +E ++ + K
Sbjct: 1031 AADALEYDPDAIAEKEEQGAMSEFIEILRDDPDRRTKLESLNLESYAEELEKNTGQRKLN 1090
Query: 805 TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAIC 864
L I EL+ GF++ RN + DE F ++GET+ T +G +V V R + IC
Sbjct: 1091 NLNTIVLELLDGFEELRNDFHPLHDDEIFQSLTGETDKTFFKGCLVPVRVERFRHNDIIC 1150
Query: 865 VLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN 924
+ S + ++ + ++ + G K+ I + E+++++
Sbjct: 1151 ITNSQVECVVNSQRHAGAQYKRPAGEIYEIGRTYPAKVVYIDYENILAEVSLLENDIKHQ 1210
Query: 925 RYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLS 984
+ DP + + + ++E+ + A+ R+I HP + +A L
Sbjct: 1211 YVPTNYSKDPSIWDLKQELEDQEEEKKITMVEARAKRTHRVINHPYYFPFNGRQAEDYLR 1270
Query: 985 AKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGED 1044
+KE G+ +IR SSRG +L +T K+ ++ H DI E K++ + +G+ L +
Sbjct: 1271 SKERGDFVIRQSSRGDDHLAITWKLDKDLFQHIDIKELEKENP-----LALGRILIVENQ 1325
Query: 1045 TFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISH 1104
+ DLD+++ Y+ V L M S KF+ G+K +V + + P R VY F ++
Sbjct: 1326 KYHDLDQIIVEYLQNKVRLLNEMTSNEKFKNGNKKDVVKFIEDYSKVNPNRSVYYFSFNY 1385
Query: 1105 EHPGTFILTY 1114
E PG F L +
Sbjct: 1386 ESPGWFFLMF 1395
>gi|448123107|ref|XP_004204612.1| Piso0_000470 [Millerozyma farinosa CBS 7064]
gi|448125373|ref|XP_004205170.1| Piso0_000470 [Millerozyma farinosa CBS 7064]
gi|358249803|emb|CCE72869.1| Piso0_000470 [Millerozyma farinosa CBS 7064]
gi|358350151|emb|CCE73430.1| Piso0_000470 [Millerozyma farinosa CBS 7064]
Length = 1449
Score = 256 bits (654), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 278/1213 (22%), Positives = 508/1213 (41%), Gaps = 141/1213 (11%)
Query: 7 RSLRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRF 66
++ R L +G+ + +E +WI + L ++G P + ++ F
Sbjct: 275 QNYRANLNYIDIEGDDLKEEQSWIADILFKE------KQGVIGPDLEEPFKTAVSKVVEF 328
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
+ ++PFI +R++ L E+ N+ L LW I L
Sbjct: 329 VSK---DSYEVPFIWAHRRDFLL------HSEELTNEEGVVITNVHKLLNEDDLWRIVQL 379
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D ++ S Y+K+ ++++ D AL QL D + K +++ ET V D
Sbjct: 380 DIEY----------HSVYEKKLN--TQKLID----AL--QLDDDLVKDIKSLETMVAVQD 421
Query: 187 VDLKFNLHFPP------------------GEVGVDEGQYKRPKRSTK-------YSSCSK 221
+ N F + +E +R STK Y +
Sbjct: 422 LHDYINFTFSSHIRELSKEKEKEEQNEIENDNDKEESSQERDSSSTKKHSKYAVYERIRE 481
Query: 222 AGLWEVASKFGYSSEQLGLQLS------------LEKMGDELEDPKETPEEMASNFKCAM 269
L++ FG S++ G + + D +E P++ E++ + + +
Sbjct: 482 NVLYDAVKAFGISAKDFGENVQDQSSKNFEVPYRIHATDDYIESPEDLIEKLCEDDEV-L 540
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
F + L R + A EI P +R VR F + A +S T G + ID+ ++ +
Sbjct: 541 FKEPKNALNAIRKIYAEEIFHNPKIRHEVRQTFKNFASISVAVTDKGKATIDNHSPYSDI 600
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ 389
K+ + +L++ E E +K+ + F SDG S ++
Sbjct: 601 KYAINRSPTDLVRNPDVLLRMLEAESAGLAVVKVETRDYDNWFQCIFNCLKSDGSSDISE 660
Query: 390 LWNDQRELILKDALDNFLLPSMVK-EARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
WN +RE++L A L SMV + + + + E + +K+ P+
Sbjct: 661 KWNKEREIVLNLAFKR--LTSMVALNTKEDLRRECERLVASEVRRRFLSKIDQAPF---- 714
Query: 449 NDITP---DEEAAPRVLACCWGPGKPETTF--VMLDSSGEVVDVLFTGCLTLRSQNVRDQ 503
TP D+ P VLA +G G ++ V + +G+V D + S V+D+
Sbjct: 715 ---TPFGFDKGTKPNVLALSFGNGDFDSAVIGVFMRDNGKVQDFFKSD-----SSPVKDK 766
Query: 504 QSKKNDQERLLKFM----MDHQPHVVVLGAVNLSCTSLKDDIYEII-FKMVEEHPRDVGH 558
+S++ Q +L +F+ ++P ++V+ N + L D + + + + D+
Sbjct: 767 ESEERFQAQLKEFLEKGLRSYKPDIIVISGYNATSKKLFDSVKSFVEMNQITVNTDDLED 826
Query: 559 EMDE--LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP 616
+ + +++G+ LY+NS + +L + K V L RY+Q+PL +L
Sbjct: 827 VENPPIIPVIWGESETATLYQNSERAKIELSEKPTLSKFCVGLARYVQSPLLEYISLQD- 885
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
ILS + + D IE VD+ N VG++IN A+ + L ++SGLG
Sbjct: 886 --NILSLTFYEHQKLIPNDLVLQAIESAFVDIVNMVGIEINEALRDPYIAQLLPYVSGLG 943
Query: 677 PRKAASLQRSL-VRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
PRKA+ L R++ + G + R D + +F+N FL + + + ++L
Sbjct: 944 PRKASGLLRNINSKLGPNLSNRSDLIEQELSTANIFINCSSFLNIPFDDASVARDGSVEL 1003
Query: 735 LDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA--LEMAIEHVRDRPDLLKTYLLDR 792
LD TRIHPE Y LA+++A + + D E + +E + I+ ++ D L +
Sbjct: 1004 LDATRIHPEDYDLARKMATDALDLDEEDMAHIEEQGGIIYQLIQEGVNKVDDLNLTAYGK 1063
Query: 793 HIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQA 852
++ K + K TL I+ EL++ +++ R ++ E F+M++GET T + +V
Sbjct: 1064 ELESKFGKKKYATLQSIKEELVNNYEELRRSFRLLDNHEVFHMLTGETNQTFSRNTIVPV 1123
Query: 853 TVRRVQGQ---------RAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIK 903
T+ RV R + V S L ++E D +G + +
Sbjct: 1124 TINRVGRNFRDAENSRIRFLKVSSSSLIQGTVEEPCIPQGAD------FVQGQVARAVVL 1177
Query: 904 SIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFK- 962
+ + E +++ P + +E E E A EKEL+K+ K
Sbjct: 1178 DVFFESFSATFSMLEEDIQKASA-------PKFRKEHLKWDFEAEAADIEKELSKERAKL 1230
Query: 963 --ERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDII 1020
R I HP F N +A + L+ K G+ + RPSS+GP++LT T KV + ++ H I
Sbjct: 1231 ARTRNIQHPLFHNFNYKQAEEYLAPKAIGDCVFRPSSKGPNFLTATWKVSNNLFQHLSIQ 1290
Query: 1021 EGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAE 1080
E +++G K + + DLD+++ ++I + H++ M + KFR G+ +E
Sbjct: 1291 E---------NIMGNTKEYIVEHKRYADLDQLIFQHIQAIAKHVEEMRRHPKFRDGTLSE 1341
Query: 1081 VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHE--YIGLYPKGFKFRKRM 1138
V+E L P Y F H+ PG F+L + + N Y+ G++ +
Sbjct: 1342 VNEWLESYTKANPKNSAYVFCFDHKAPGWFLLLFKVNINTPITTWYVKTECDGYRLKGFS 1401
Query: 1139 FEDIDRLVAYFQR 1151
+ ++ RL F++
Sbjct: 1402 YPNMLRLCNGFKQ 1414
>gi|255717034|ref|XP_002554798.1| KLTH0F14036p [Lachancea thermotolerans]
gi|238936181|emb|CAR24361.1| KLTH0F14036p [Lachancea thermotolerans CBS 6340]
Length = 1455
Score = 253 bits (646), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 262/1093 (23%), Positives = 483/1093 (44%), Gaps = 93/1093 (8%)
Query: 54 HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT 113
+DL+ ++ + + + + L++PFI YR+ S KD V N+++
Sbjct: 353 YDLTEFKEAVGNAIRFVSKENLEVPFIYAYRRNYISSKEKD---GFVLNEDD-------- 401
Query: 114 LKWHKVLWAIHDLDKKWL-LLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
LW I +D ++ ++ KR Y KK YE+ L + + D
Sbjct: 402 ------LWEIVHMDSEFHSIIYKR-----DYVKKFYEQ----------LGVQDPVVDEYF 440
Query: 173 KSLEAAETE-REVDDV----DLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEV 227
K+ ++ TE + D+ + KF + G K+ +++ Y + L+
Sbjct: 441 KNQGSSMTELTSLQDIYNYLEFKFAREINEALLAQSSGSTKKHMKNSSYEKFKSSPLYSA 500
Query: 228 ASKFGYSSEQLGLQLSLEKMGDELED-----PKETPEEMASNFKCAM--FNSSQAV-LQG 279
S+ G +S+Q+G + E + D P++ E++ +N + F+S+ + L+
Sbjct: 501 VSQIGITSDQIGENIHSEHQIHPVVDHPDQKPQDIIEDLLANSSADLQAFSSNHKLALET 560
Query: 280 ARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRK 339
+ ++EI+ P VR+ VR+ F +V + G I + +K+ +
Sbjct: 561 VQKYYSLEIANNPKVREKVRADFYKYYIVDVVLSVKGKKEIQRGSPYEDIKYAINRTPAH 620
Query: 340 FEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYL-SDGVSKSAQLWNDQRELI 398
F + ++ E E L ++IK+ S + + L + S+ A WN+ R+
Sbjct: 621 FRREPEVFLRMLEAESLHLMSIKIHMSSQTQYCDHLFQTALDTTNTSEIATEWNNFRKAA 680
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
AL+ L + +E + + + + K+ P+ P +
Sbjct: 681 FFTALEKIFL-EISQEIKDDLKKDCQRLVSKSVRHRFMTKLDQAPFIP-----NPRDPKI 734
Query: 459 PRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMM 518
PRVLA G G ++ D + + +N D+ + + +E L +
Sbjct: 735 PRVLAITCGLGHFGKDAIIAVYVNRKTDYVRDYKIV---ENPFDRHNPEKFEETLDNIIQ 791
Query: 519 DHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYEN 578
QP+ + + N L I E+I K ++ + GH + ++Y ++ + Y+
Sbjct: 792 TCQPNAIGINGPNPKTQRLLRKIQEVIQK--KQIVDNRGHN---IPVIYVEDEIATRYQT 846
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKY 638
S + P + VK + L RY+ +PL L E++S + P ++ LT +
Sbjct: 847 SERGIQEYPNKPPLVKYCIGLARYMHSPLLEYVNLTPD--ELMSLSIHPSQSLLTRENFM 904
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG-AIFTRK 697
+E VD+ N VG+++N A + LQ+ISGLG RKA SL R + R+
Sbjct: 905 KALETSFVDLVNLVGVEVNKATDSAYYARCLQYISGLGKRKATDFLESLQRLNEPLLARQ 964
Query: 698 DFVTAHGLGKKVFVNAVGFLRV--RRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+T + L K +F+N+ GFL + + Q + D LD TRIHPE Y LA ++A +
Sbjct: 965 QLITHNILHKTIFMNSAGFLYISWNQKNQRYEDLEH-DQLDSTRIHPEDYHLATKVAADA 1023
Query: 756 YNRDIEGDLNDDEDALEMA--IEHVRDRPDL---LKTYLLDRHIKEKKR---ENKRETLY 807
D + + + ED M+ IE +R+ P+ L++ L+ + +E ++ + K L
Sbjct: 1024 LEYDPDA-IAEKEDQGTMSEFIEILREDPECKSKLESLNLEAYAEELEKNTGQKKLNNLN 1082
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
I EL++GF++ RN + DE F ++GET+ T +G +V V R + IC
Sbjct: 1083 TIVLELLNGFEELRNDFHPLHGDEVFTTLTGETDKTFFKGCIVPVKVERFRHSDIICTTN 1142
Query: 868 SGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQ 927
S + ++ + ++ S+ K+ I + E + ++ +
Sbjct: 1143 SQVECIVNAQRHAGAQLKRPASEIYEISKTYPAKVIFIDYEN-----ISAEVSLLDHDVK 1197
Query: 928 HCQNLDPYYHEERS--SRQSEQEKARKEKELAKKHFK----ERLIVHPCFQNVTADEAMK 981
H Q + +Y ++ S + E E A +EK++A + + R+I HP + +A
Sbjct: 1198 H-QYVPVHYSKDPSVWDLKQELEDAEEEKQIAMREARAKRTHRVINHPYYFPFNGKQAED 1256
Query: 982 LLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI 1041
L +KE G+ +IR SSRG +L++T K+ ++ H DI+E K++ + +G+ L +
Sbjct: 1257 YLRSKERGDFLIRQSSRGDDHLSITWKLDKDLFQHVDILEQEKENP-----LALGRVLIV 1311
Query: 1042 GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFG 1101
+ DLD+++ Y+ V L + S KF+KG+K EV + + P R VY F
Sbjct: 1312 EGQVYHDLDQIIVEYLQNKVRLLNEITSNEKFKKGTKREVTKFIEDYSKVNPNRSVYYFS 1371
Query: 1102 ISHEHPGTFILTY 1114
++EHPG F L +
Sbjct: 1372 FNYEHPGWFYLMF 1384
>gi|238883558|gb|EEQ47196.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1396
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 239/952 (25%), Positives = 430/952 (45%), Gaps = 88/952 (9%)
Query: 203 DEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK-MGDEL-------EDP 254
+E Q ++ + Y + L++ +G ++++ G + + G E+ +DP
Sbjct: 437 EETQNRKHSKFALYERIRENVLYDAVKAYGITAKEFGENVQDQSSKGFEVPYRIHATDDP 496
Query: 255 KETPEEMASNF---KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC 311
E+P++M +F + R A EI P +R VRS + A +S
Sbjct: 497 WESPDDMIERLIQDDEVIFRDEKTARDAVRRTFADEIFYNPKIRHEVRSTYKLYASISVA 556
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
T G ++ID+ FA +K+ + +L++ E E+L V IK+
Sbjct: 557 VTEKGRASIDAHSPFADIKYAINRSPADLIAKPDVLLRMLEAERLGLVVIKVETKDFANW 616
Query: 372 FSDCKEHYL-SDGVSKSAQLWNDQRELILKDALDNFLL-------PSMVKEARSLMSGRA 423
F DC + L SDG S ++ WN +R+ +L+ A+ + +E L++ +
Sbjct: 617 F-DCLFNCLKSDGFSDISEKWNQERQAVLRTAISRLCAVVALNTKEDLRRECERLIASKV 675
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFV--MLDSS 481
+ LL K+ P+ DI + VLA +G G ++ V +
Sbjct: 676 RHGLLA--------KIEQAPFTPYGFDIG----SKANVLALTFGKGDYDSAVVGVYIKHD 723
Query: 482 GEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
G+V F S+N + + K ++ F D P VVV+ N + L D
Sbjct: 724 GKVSR--FFKSTENPSRNRETEDAFKGQLKQF--FDEDETPDVVVVSGYNANTKRLHD-- 777
Query: 542 YEIIFKMVEEHPRDVGHEMDE-----LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA 596
+++ V E+ V E D+ + +++G + RLY+NS + + P + VK A
Sbjct: 778 --VVYNFVSEYGISVKSEFDDGSSQLVKVIWGQDETARLYQNSERAKKEFPDKPTLVKYA 835
Query: 597 VALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDI 656
++LGRYLQ+PL TL G +ILS + ++ D ++E VD+ N VG+DI
Sbjct: 836 ISLGRYLQDPLLEYITL---GDDILSLTFHEHQKLISNDLVKEVVESAFVDLVNAVGVDI 892
Query: 657 NLAIHREWQFAPLQFISGLGPRKAASLQRSLV-RAGAIFT-RKDFVTAHGLGKKVFVNAV 714
N ++ L+++ GLGPRKA+ + R++ + G++ T R + + +F+N
Sbjct: 893 NESVRDSRLAQTLKYVGGLGPRKASGMLRNIAQKLGSVLTTRSQLIEYELTTRTIFINCS 952
Query: 715 GFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMA 774
L++ + I++LD TRIHPE Y LA ++A + + D E +L++ ++
Sbjct: 953 AALKISLNKSINVKDFEIEILDTTRIHPEDYQLAMKMAADALDMDEESELHEKGGVIKEL 1012
Query: 775 IEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFY 834
+E+ ++ +LL I + + K +L IR ELI GF + R+ ++ + ++ F+
Sbjct: 1013 LENDPNKLNLLNLNDFANQIYKLTHKLKFRSLQAIRLELIQGFAEIRSPFRILTNEDAFF 1072
Query: 835 MISGETEDTLAEGRVVQATVRRVQGQ--------RAICVLESGLAGMLMKEDYSDDWRDS 886
+++GE L + V+ AT+ +V R + V+ L + E+ RD+
Sbjct: 1073 ILTGEKPQML-KNTVIPATITKVTKNHHDPYARIRGLKVVTPSLIQGTIDENAIP--RDA 1129
Query: 887 ELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE----MRNNRYQHCQNLDPYYHEERSS 942
E ++ + + + L R + M+ + D +E
Sbjct: 1130 EYVQGQVVQSVVL----ELYTDTFAAVLSLRREDISRAMKGGVVREYGKWDYKAEDEDIK 1185
Query: 943 RQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSY 1002
R EKA++ +LAK R I HP ++N +A + L+ + G+ +IRPSS+G SY
Sbjct: 1186 R----EKAKENAKLAKT----RNIQHPFYRNFNYKQAEEYLAPQNVGDYVIRPSSKGASY 1237
Query: 1003 LTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVS 1062
LT+T KV + ++ H + E + G K + T+EDLD++ ++I +
Sbjct: 1238 LTITWKVGNNLFQHLLVEERSR---------GRFKEYIVDGKTYEDLDQLAFQHIQVIAK 1288
Query: 1063 HLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++ M+ + KFR+G+ + V E L P Y F H+ PG F+L +
Sbjct: 1289 NVTDMVRHPKFREGTLSVVHEWLESYTRANPKSSAYVFCYDHKSPGNFLLLF 1340
>gi|326438047|gb|EGD83617.1| hypothetical protein PTSG_04225 [Salpingoeca sp. ATCC 50818]
Length = 1774
Score = 249 bits (636), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 265/1109 (23%), Positives = 492/1109 (44%), Gaps = 106/1109 (9%)
Query: 76 DIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQK 135
++PFIA +RKE P + LW I D D ++
Sbjct: 359 EVPFIAQHRKE---------------------LAHFPHILNVHDLWLIDDYDVRFSQHMN 397
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHF 195
RK+ L + E D+ RL L + + + ++ ++ R+ D F
Sbjct: 398 RKAKLLDARDRLMEVLDE---DDHRLRLLTETERNFMQEVQFEDSLRDCSDYLSYFFAQE 454
Query: 196 PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
G+ + KR K S +Y C + G+ + FG S + L L +
Sbjct: 455 SQGDTSL-----KR-KTSRQYHVCERLGITKFIKHFGVSVTDIADVL-LRARAVTMTPDH 507
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMD------NAVVS 309
+ PE+ A +F A F++++ V++ AR+ AVEI+ P ++ + R D ++
Sbjct: 508 QMPEDTAVDFAIAPFDTTEKVVEAARYCLAVEIAMHPEIKSHWREQLADAIRGGGGVFIT 567
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
T PT G ++ + + A ++L EKP+ D +L +++A EK L++ + + ++
Sbjct: 568 TRPTRTGYQTVEPWERIAKFRFLTEKPISTLYDDTFLWMEQAVAEKKLKLDMFIDGAIIS 627
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
+ + D + + W + E L D L SM+++ R + AK +++
Sbjct: 628 NIKQLIMDKCQPDPPTMTTAEWQKEFEKAL-DMAHEMLAESMIRDLRIKLREEAKMFVVE 686
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLF 489
+ + N V+ P + P + + A P + V++ G+V+D +
Sbjct: 687 QCANYVRNIVNRRPVE------PPHLDQEQNIAALVLAPAGTRSFMVVIGPEGDVIDHVG 740
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
L R R ++ +K D E++ F+ HQP+VV LGA +++ ++ + V
Sbjct: 741 LDWLHARRMTDRVEKFRK-DLEKIKVFLEKHQPYVVGLGADSVASKFFARELSAV----V 795
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
E+ G E+ ++ D + R+Y + R S+ + P +K AV++ R +Q P
Sbjct: 796 EDALYREGEPPVEVELMPVD--MARVYASGRRSAQEFPKYPTELKMAVSIARRMQAPELE 853
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKY-GMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+A L GPG++IL ++ PL+ ++ + + + +VMV V N+ G+ IN A+ +
Sbjct: 854 MAALFGPGKDILCIQMHPLQKSISQADLFDALYREVMVAV-NRTGVRINSAVSKPHIAHA 912
Query: 669 LQFISGLGPRKAASLQRSLVRA---GAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
L+F+ GLGPRKA L S +R G I R + V L ++ + ++
Sbjct: 913 LEFVCGLGPRKADMLI-STIRTQFRGRIINRHQTINDE-------VAQQALLELQEAKES 964
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM-AIEHVR-DRPD 783
++ + + R+ G +++Y + +D + L M A E + RPD
Sbjct: 965 PFKTEHL-IEFAKRLRERGEGDLSMTVQDIYRELLRPLRDDRHEFLPMRAFEPMPGQRPD 1023
Query: 784 LLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT 843
DR + EN + + + ++ I F+ ++ E ++ + +
Sbjct: 1024 -------DRPVT----ENDIKLFFCLTQQAI-PFKGAVEVHEHNRPAELYFHEWLPVDYS 1071
Query: 844 LAEGRVVQATVRR--------VQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEG 895
+ EG++V A V R + R + + L G LM D SDD+ ++ + + G
Sbjct: 1072 VVEGQLVDAEVVRFDLGRMDETRVHRVMLRCSNDLPGFLMASDVSDDF-IADPREVMQVG 1130
Query: 896 DILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQ---NLDPYYHEERSSRQSEQEKARK 952
++T ++ I + ++ L + SE+R +C D Y E+ + E + A K
Sbjct: 1131 QMVTARVLQIDVHFMRLKLTTKGSELRGETEWYCPANWGYDSMYDEQ---AEREFKAALK 1187
Query: 953 EKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDG 1012
+E + + +R++ HP F NV+ +A+ +LS G+ + RPSSRG + LTLT K
Sbjct: 1188 PQEQKRSKYAKRMVTHPRFFNVSYAKALAILSDYSEGDGLFRPSSRGTNQLTLTWKALPD 1247
Query: 1013 VYAHKDIIEGGKDHKDIKSL-----VGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAM 1067
+ H + E K +SL + IG +K FEDLDE++ Y++P +++ +
Sbjct: 1248 MLVHVAVDEDPKYKATAESLSSRLTIRIGNAIK----EFEDLDEIIFSYLNPTYDNVRRI 1303
Query: 1068 LSYRK-FRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG-TFILTYIR-STNPHHEY 1124
RK F EV+++L K + P RI Y F +H G F L+++ ST+ +
Sbjct: 1304 TGNRKYFADKPVEEVEKMLVERKQKEPKRIPYMFSPRKDHHGCCFWLSFLPGSTSVRRWH 1363
Query: 1125 IGLYPKGFKFRKRMFEDIDRLVAYFQRHI 1153
+ + P G+ F ++ LV++F+R+
Sbjct: 1364 LYVLPDGYLMDNHTFPSLNDLVSWFKRNF 1392
>gi|149235708|ref|XP_001523732.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452711|gb|EDK46967.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1038
Score = 249 bits (635), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 244/966 (25%), Positives = 426/966 (44%), Gaps = 93/966 (9%)
Query: 224 LWEVASKFGYSSEQLGLQLSLEKMGD--------ELEDPKETPEEMASNF---KCAMFNS 272
L++ +G +++ G + + GD +D ETPE M +F
Sbjct: 69 LYDAVKAYGITAKAFGENVQDQSAGDFERAYRLHATDDNTETPEYMIDKLIDDDEVLFKD 128
Query: 273 SQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW- 331
+ R A EI P VR+ VRS + A++S T G ID+F +A +K+
Sbjct: 129 EKTARDAVRRTFAEEIFHNPKVRQEVRSTYKSFALISVALTEKGRIGIDNFSPYADIKYA 188
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLW 391
+ P + L EEK L V IK+ + F + SDG+S+ + LW
Sbjct: 189 INRSPQDLVSEPNVFLRMLEAEEKGLAV-IKIETANFENWFEAIFKCLKSDGLSEVSDLW 247
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
N +REL+L+ A L + + + + + E K +NK+ P+
Sbjct: 248 NKERELVLRMAFQK-LCGMVALNTKEDLRRECQRLVAKEVRKRFYNKLDQAPF------- 299
Query: 452 TP---DEEAAPRVLACCWGPGKPETTFV--MLDSSGEVVDVLFTGCLTLRSQNVRDQQSK 506
TP D P VL+ +G G ++ + +L SGEV D F + + ++
Sbjct: 300 TPYGYDLGTVPNVLSLTFGQGDYDSAVLGALLRDSGEVKD-FFKSIINPINSRENEESFG 358
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVG--------- 557
+E L K + ++P V+V+ N + L ++I+ + V+ + +
Sbjct: 359 GQLKEFLDKNLEHNRPDVIVISGYNANTKKL----FDIVKRFVQSNRILINTEGTSLQNN 414
Query: 558 -HEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP 616
E L +++G + RLY+NS + P + VK A+ + +Y+QNPL +L
Sbjct: 415 EQEAPLLPVIWGQDETARLYQNSDRARLAFPEKPTLVKYAIGVAKYVQNPLLEYISL--- 471
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
G +ILS + + D +E VD N +G+DIN+AI + LQ+++G G
Sbjct: 472 GDDILSLTFHQDQKLIPKDMVRDALESAYVDAVNTLGVDINVAIRDRYVAQMLQYVAGFG 531
Query: 677 PRKAASLQRSLVR--AGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
PRKA+ L R++ ++ TR+D + K+F N FL++ SS I+L
Sbjct: 532 PRKASGLLRNMESKLITSLATRQDLIELELTPLKIFQNCASFLKIPYDETDNISSSSIEL 591
Query: 735 LDDTRIHPESYGLAQELAKEVYNR---------DIEGDLND-DEDALEMAIEHVRDRPDL 784
LD TRIHPE Y LA+++A +V ++ LN D +E+++ +
Sbjct: 592 LDATRIHPEDYLLAKKIAADVLELDEEDFDEDTNVIAQLNAADASKIEVSMASLD----- 646
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
Y L ++++ + K TL +I+ EL++ +++ R +Y E + E F M++GET T
Sbjct: 647 YNHYGLQI--QQQQGKKKFATLRVIKEELVNNYEELRGKYHELTDQEAFNMLTGETRATF 704
Query: 845 AEGRVVQATV----RRVQGQRAICVLESGLAGMLMKEDYSDD-WRDSELSDKLHEGDILT 899
+V TV R Q A + L++ + D RD +L +G
Sbjct: 705 GRDAIVPVTVLKLGRNYQDPSAPIRWAKVVTSSLIQANVEQDKIRDMDL----EQGKTYQ 760
Query: 900 CKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKK 959
I + + + + +++ + ++ R E + ++ ++ K
Sbjct: 761 AVILEVFYDTFTADMSLLAEDIKRASIPRIDKVGGKWN----FRAEEDDWKKENEKEKAK 816
Query: 960 HFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDI 1019
R I HP ++N +A + L+ + G+ +IRPSSRGP +LT+T KV + ++ H +
Sbjct: 817 KALTRNIQHPLYRNFNYKQAEEFLAPQNLGDCVIRPSSRGPDFLTITWKVGNNLFQHLLV 876
Query: 1020 IEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKA 1079
E + K+ + GK ++ DLD+++ ++I + + ++ KFR+G+ A
Sbjct: 877 EERKRGRKE---YIVEGK-------SYSDLDQLIFQHIQAISKKVDDLVRSPKFREGTLA 926
Query: 1080 EVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNP-----HHEYI--GLYPKGF 1132
EV + L P Y F H+ PG+F+L + + N H + I G KG
Sbjct: 927 EVHDWLESYTKANPKSSAYVFCYDHKVPGSFLLLFKVNVNTPIVTWHVKTITEGYTLKGL 986
Query: 1133 KFRKRM 1138
F M
Sbjct: 987 NFSSVM 992
>gi|241957767|ref|XP_002421603.1| transcription elongation, nucleosome (dis)assembly factor, putative
[Candida dubliniensis CD36]
gi|223644947|emb|CAX40947.1| transcription elongation, nucleosome (dis)assembly factor, putative
[Candida dubliniensis CD36]
Length = 1403
Score = 248 bits (633), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 243/959 (25%), Positives = 433/959 (45%), Gaps = 105/959 (10%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFG-----YSSEQLGLQLSLEKMGDELEDPKETPEEM 261
++R + + Y + G+ A +FG SS+ + + D E P + E +
Sbjct: 454 FERIRENVLYDAVKAYGI--SAKEFGENVQDQSSKGFEVPYRIHATDDAWESPDDMIERL 511
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
+ + +F + R A EI P +R VRS + A +S T G + ID
Sbjct: 512 IQDDEV-IFRDEKTARDAVRRTFADEIFHNPKIRHEVRSTYKSYASISVAVTEKGRATID 570
Query: 322 SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLS 381
+ FA +K+ + +L++ E E+L IK+ + F S
Sbjct: 571 THSPFADIKYAINRSPGDLIAKPDVLLRMLEAERLGLAVIKVETKDFSSWFQCIFNCLKS 630
Query: 382 DGVSKSAQLWNDQRELILKDALDNFLLPSMV---------KEARSLMSGRAKSWLLMEYG 432
DG S+ ++ WN +RE++L A L SMV +E L++ + + LL
Sbjct: 631 DGFSEISEKWNKEREIVLNLAFKR--LCSMVALNTKEDLRRECERLIANKVRRGLLA--- 685
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFV--MLDSSGEVVDVLFT 490
K+ PY DI + VLA +G G ++ V + G+V +
Sbjct: 686 -----KIEQAPYTPYGFDIG----SKSNVLALTFGKGDYDSAVVGVYIKHDGKV-----S 731
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKF----MMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
R+++++ + +L +F + D P V+V+ N + L Y++++
Sbjct: 732 RFFKSDDNPSRNRETEDAFKGQLKQFFDEDLRDETPDVIVVSGYNANTKRL----YDVVY 787
Query: 547 KMVEEHPRDVGHEMDE-----LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGR 601
V E V + ++ + +V+G + RLY+NS + + P + VK AV+LGR
Sbjct: 788 SFVSEFGISVKSDFEDGTSQLIKVVWGQDETARLYQNSDRAKKEFPDKPTLVKYAVSLGR 847
Query: 602 YLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIH 661
YLQNPL L G +ILS + ++ D ++E VD+ N VG+DIN A+
Sbjct: 848 YLQNPLLEYIAL---GDDILSLTFHEHQKLISNDLVKEVVESAFVDIVNAVGVDINEAV- 903
Query: 662 REWQFA-PLQFISGLGPRKAASLQRSL-VRAGAIFT-RKDFVTAHGLGKKVFVNAVGFLR 718
R+ + A LQ++ GLGPRKA+ L R++ G++ R V +F+N L
Sbjct: 904 RDLRLAQTLQYVGGLGPRKASGLLRNIGSNLGSVLVNRSALVEEELTTANIFINCASALN 963
Query: 719 VRRSGQAASSSQF-IDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALE----- 772
V G++ +S F +++LD TRIHPE Y LA+++A + L DE+ +E
Sbjct: 964 VV-VGKSVNSKDFEVEILDSTRIHPEDYELARKMAADA--------LEVDEEDMEHLGRG 1014
Query: 773 -MAIEHVRDRP---DLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPS 828
+ + ++D P + L + ++E+ + K TL I+ ELI+ +++ R ++ +
Sbjct: 1015 GVINQLMKDDPRKLNALNLLAFAKELEERIGKKKFRTLQAIKEELINNYEEVRAPFRILN 1074
Query: 829 QDEEFYMISGETEDTLAEGRVVQATVRRVQGQ--------RAICVLESGLAGMLMKEDYS 880
++ F++++GE L + ++ T+ +V R + V+ L + E+
Sbjct: 1075 NEDAFFILTGERPQQL-KNTIIPVTITKVNKNFNDPYAKIRGLKVVTPSLIQGTIDENVI 1133
Query: 881 DDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEER 940
RD+E ++ N V + +E R + + + H+
Sbjct: 1134 P--RDAEYVQGQVVQ---AVVLELYTDNFTAVLSLRKEDIARAMKGVVVREYGKWDHKAE 1188
Query: 941 SSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGP 1000
+ ++EKA++ +LAK R I HP ++N +A + L+ + G+ +IRPSS+GP
Sbjct: 1189 DA-DIKREKAKENAKLAKT----RNIQHPFYRNFNYKQAEEYLAPQNVGDYVIRPSSKGP 1243
Query: 1001 SYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPL 1060
SYLT+T KV + ++ H + E + G K + T+EDLD++ ++I +
Sbjct: 1244 SYLTITWKVGNNLFQHLLVEE---------RIRGRFKEYIVDGKTYEDLDQLAFQHIQVI 1294
Query: 1061 VSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
++ M+ + KFR+G+ + V E L P Y F H+ PG F+L + + N
Sbjct: 1295 AKNVTDMVRHPKFREGTLSVVHEWLESYTRANPKSSAYVFCYDHKSPGNFLLLFKVNVN 1353
>gi|403213922|emb|CCK68424.1| hypothetical protein KNAG_0A07710 [Kazachstania naganishii CBS 8797]
Length = 1452
Score = 245 bits (626), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 257/1107 (23%), Positives = 496/1107 (44%), Gaps = 84/1107 (7%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
DL+ ++ I + + L++PFI YR+ N +++ F T
Sbjct: 370 DLTEFKESIGNAIKFISQDNLEVPFIYAYRR------------NYISSRIAGGFVLT--- 414
Query: 115 KWHKVLWAIHDLDKKW-LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK 173
LW I LD ++ L+ KR SY KK YE+ + D NQ S
Sbjct: 415 --EDDLWEIVKLDIEFHSLINKR-----SYVKKFYEDLDIQDDDVDEYFSNQ-----TSA 462
Query: 174 SLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQY--KRPKRSTKYSSCSKAGLWEVASKF 231
S+ T +++ + L+F +V + K+ +++ Y + L++ +
Sbjct: 463 SVAELNTLQDIHNY-LEFKYAQEINQVLTNHADRSGKKHLKNSSYEKFKSSPLYQAVTDI 521
Query: 232 GYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNF------KCAMFNSSQAV-LQGARHM 283
G S+ Q+G +S + ++ ++ P P ++ + +F+ + A+ + +
Sbjct: 522 GVSAGQVGENISSQHQIHTAVDHPSMAPNQIIESIISENSDDLQIFSRNNALAVDTVKKY 581
Query: 284 AAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW-LREKPLRKFED 342
++E+S +R+ VR+ F +V T G + I + +K+ + PL +D
Sbjct: 582 YSLELSKNIKIREKVRADFYKYYLVDVVLTKKGKNEIQRGSLYEDIKYAINRTPLHFQKD 641
Query: 343 AQ-WLLIQKAEEEKLLQVTIKLPEDS--LNKLFSDCKEHYLSDGVSKSAQLWNDQRELIL 399
+L + +AE LL V + + S + LF E + S A WN+ R+
Sbjct: 642 PDVFLRMLEAESLNLLNVRLHMSSQSQYIEHLFQIALE---TTDTSSLATEWNNFRKEAF 698
Query: 400 KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY--QRKDNDITPDEEA 457
KDAL N + + E + ++ + + + K+ P+ KD I
Sbjct: 699 KDAL-NHIFSDISGEIKDDLTKTCQKLVAKVVRHKMMTKLDQAPFVPNMKDPKI------ 751
Query: 458 APRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFM 517
PRVL G G+ ++ D + + QN D+ + + + L + +
Sbjct: 752 -PRVLTLTCGQGRFGLDAIIGVFVNRKTDFVKDFKII---QNPFDKSNPQAFDDELDRII 807
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
Q + + + N I E+I + +E + GH + ++Y ++ + Y+
Sbjct: 808 ESCQVNAIGINGPNPQTEKFYKRIQEVIHR--KEIVDNRGHAV---PVIYVEDEIALRYQ 862
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
+S+ +S++ P + VK +AL RY+ +PL A+L EI+S + P + L +
Sbjct: 863 SSKRASEEFPNKPPLVKYCIALARYMHSPLLEYASLSDD--EIVSLSIHPFQTLLPTNIL 920
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTR 696
+E VD+ N VG+++N A + ++ L++++G G RK+ +SL R + R
Sbjct: 921 LQALETAFVDIVNLVGVEVNKATNNDYYSRCLRYVAGFGKRKSIDFVQSLHRLNEPLLAR 980
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQELAKEV 755
+ +T + L K +F+NA GFL + + + D LD TRIHPE Y LA ++A +
Sbjct: 981 QQLITHNILHKTIFMNAAGFLYISWNEKRQRYEDLEHDQLDSTRIHPEDYHLATKVAADA 1040
Query: 756 --YNRDIEGDLNDDEDALEMAIEHVRDRPDL---LKTYLLDRH---IKEKKRENKRETLY 807
Y+ D+ + +D+ + I+++RD D L++ L+++ +++K + K L
Sbjct: 1041 LEYDPDVIAE-KEDQGTMSDFIDYLRDDNDKRAKLESLNLEQYAEQLEQKTGQRKLNNLS 1099
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
I EL+ GF++ RN + DE F+ ++GETE T ++G ++ + R CV
Sbjct: 1100 TIVLELLDGFEELRNDFHPLQGDEIFHTLTGETEKTFSKGCIIPVRIERFWHNDIKCVTN 1159
Query: 868 SGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQ 927
SG+ + + ++ S+ G K+ I + + ++++
Sbjct: 1160 SGVECTVNAQRHAGAEYKRSASEMYELGKTYPAKVIYIDYPNISAEVSLLDHDVQHEYVP 1219
Query: 928 HCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKE 987
+ DP + + + +E+ + E A++ R+I HP + +A L +K+
Sbjct: 1220 ISYSKDPSIWDLKQELKDAEEEKKITNERAREKRTHRVINHPYYFPFNHRQAEDYLRSKD 1279
Query: 988 PGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFE 1047
G+ +IR SSRG +LT+T K+ ++ H DI E K++ + +G+ L + +
Sbjct: 1280 RGDFVIRQSSRGDDHLTITWKLDKDLFEHIDIKELEKENP-----LALGRILVVDNQRYH 1334
Query: 1048 DLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
DLD+++ Y+ + L M+S KF++G+ EV + + P + VY F ++++HP
Sbjct: 1335 DLDQLIVEYLQHKIRLLNEMISNEKFKRGTPKEVTKFIEDYSKVNPKKSVYYFSLNYDHP 1394
Query: 1108 GTFILTY-IRSTNPHHEY-IGLYPKGF 1132
G F + + I + P + + + L GF
Sbjct: 1395 GWFYINFKINADKPLYTWNVKLTNTGF 1421
>gi|150866119|ref|XP_001385609.2| hypothetical protein PICST_84971 [Scheffersomyces stipitis CBS 6054]
gi|149387375|gb|ABN67580.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 1419
Score = 243 bits (619), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 279/1199 (23%), Positives = 522/1199 (43%), Gaps = 121/1199 (10%)
Query: 19 DGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIP 78
+GE + +E WI + L L G G R+ + + ++ + ++P
Sbjct: 281 EGEELQNEKEWIASILSKEKQGLVG---------GFLEQPFREAVGKVVEFVSKDSYEVP 331
Query: 79 FIAMYRKEECLSLLKDLEQNE--VNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
FI +R++ L ++++ E VNN+ L + LW I LD ++ L ++
Sbjct: 332 FIWTHRRD-FLLYSREIQDAEGVVNNE-------VHKLLYEDDLWRIVHLDIEYHSLYEK 383
Query: 137 KSALQSYYKKRYEEES--RRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
+ ++ ++ + I + Q L D I + A RE+++
Sbjct: 384 RLNIEKLIDALSIDDDLVKDIKSLDTMVAVQDLHDYIQFTYSAEI--RELNNKTEDLEDG 441
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG-----YSSEQLGLQLSLEKMGD 249
PG+ ++R + + Y G+ A +FG SS++ + + D
Sbjct: 442 NKPGKKHSKFALFERIRSNILYDGVKAFGI--SAKEFGENVQDQSSKKFEVPYRIHATDD 499
Query: 250 ELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
LE P++ E++ + + +F ++ R A EI P +R VR + A +S
Sbjct: 500 SLESPEDMIEKLCEDDEV-IFKDEKSARDAVRRTFAEEIYQNPKIRHEVRQTYKAFASIS 558
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
T G + ID +A +K+ + +L++ E E IK+ +
Sbjct: 559 VAITEKGRATIDRHSPYADIKYAINRSPADLVKQPDVLLRMLEAESSGLAVIKVETKDYD 618
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
F SDG S+ + WN +RE +L A L ++ + + + +
Sbjct: 619 NWFQCICNCLKSDGSSEISDKWNREREHVLTLAFKK-LCATVALNTKEDLRRECERLVAS 677
Query: 430 EYGKALWNKVSVGPYQRKDNDITP---DEEAAPRVLACCWGPGKPETTFV--MLDSSGEV 484
E + +KV PY P D+ + VLA +G G+ ++ V L G
Sbjct: 678 EVRRRFLSKVDQSPY-------VPYGFDKGSKANVLALSFGKGEFDSAVVGAFLKHDG-- 728
Query: 485 VDVLFTGCLTLRSQNVRDQQSKKND----QERLLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
LF + +D+++++ Q+ L + + D++P V+ + N + L D
Sbjct: 729 ---LFGEVFKSENNPTKDRENEEQFAGQLQQYLDRLLGDYKPDVIAVSGYNANTKRLFDA 785
Query: 541 IYEIIFK------MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
I + K + E+H +D + +++++G + RLY+NS ++ + P + K
Sbjct: 786 IVNTVEKNNIRVSLSEDH-KDFNNP-PLVNVIWGQDETARLYQNSDRATQEFPEKPTLYK 843
Query: 595 RAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGL 654
V + RY+QNPL +L +ILS + + D +E V VD+ N VG+
Sbjct: 844 YCVGVARYIQNPLLEYVSL---KDDILSLTFHEHQKLIPADAVKDAVESVFVDIINMVGV 900
Query: 655 DINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFT-RKDFVTAHGLGKKVFVN 712
+IN A+ + L +ISGLGPRK++ L R++ + G+ + R D + + +F+N
Sbjct: 901 EINEAVRDPYVAQLLPYISGLGPRKSSGLIRNINAKLGSTLSNRSDLIESELTTANIFIN 960
Query: 713 AVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALE 772
FL + + + +S ++LLD TRIHPE Y LA+++A + + D E D+ E+
Sbjct: 961 CSSFLNIP-ALETSSRDTSVELLDATRIHPEDYDLARKMAADALDLD-EEDMAHIEEQGG 1018
Query: 773 MAIEHVRD---RPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQ 829
+ + +++ R D L + ++ K + K TL +I+ EL++ F++ R +
Sbjct: 1019 IIYQLMKEGVSRVDELNLVAYGKELESKFGKKKYATLQMIKEELVNNFEELRRSFHLLDN 1078
Query: 830 DEEFYMISGETEDTLAEGRVV---------------QATVRRVQGQRAICVLESGLAGML 874
E F M++GET +T + VV QA +R + V+ S L
Sbjct: 1079 AEVFQMLTGETTETFSRNVVVPVTVVRVGKNFRDYEQAKIRFAK------VVTSSLITGN 1132
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
++E+ D L++G I+ I + + + L + ++R +
Sbjct: 1133 IEENSIPSGID------LNQGQIVQAVILDVFYDSFTATLSLLDDDLRKANAPRFVKEEG 1186
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ ++E+A++ +LAK R + HP + N +A + L+ + G+ +IR
Sbjct: 1187 KWDFTAEEDDWKKERAKERAKLAKT----RNVQHPLYHNFNFKQAEEFLAPQAVGDCVIR 1242
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVD 1054
PSS+GP++LT+T KV + ++ H ++ K +K V GK + DLD+++
Sbjct: 1243 PSSKGPNFLTITWKVANNLFQH--LLVQEKTSGRLKEYVVEGK-------KYGDLDQLIF 1293
Query: 1055 RYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++I + + M + KFR+G+ +EV+E L P Y F H+ PG+F+L +
Sbjct: 1294 QHIQSIAKKVLEMTRHPKFREGTLSEVNEWLDSYTRANPKSSAYVFCFDHKLPGSFLLLF 1353
Query: 1115 -IRSTNP------HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRS 1166
+ + P E G KGF + M + F+ ++ + + SAPS R+
Sbjct: 1354 KVNANTPISTWHVRTEVDGYTLKGFSY-PNMLRLCNGFKQTFKSYVSNTR--SAPSNRA 1409
>gi|321453227|gb|EFX64484.1| hypothetical protein DAPPUDRAFT_266300 [Daphnia pulex]
Length = 1215
Score = 240 bits (613), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 222/882 (25%), Positives = 397/882 (45%), Gaps = 98/882 (11%)
Query: 16 PPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQK 74
P +G + +D ES WIY + F +G + ++ I R L+ + Q
Sbjct: 133 PVEEGSTELDNESYWIY-------VLAFISKGPQTVEK----------IRRVLEFIRHQN 175
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
++PFIA YRKE L ++ LW I++LD KW+ Q
Sbjct: 176 FEVPFIACYRKEHVQPELSMID-----------------------LWIIYELDGKWMKFQ 212
Query: 135 KRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
K + ++ + + + + R+ L D +SL+ + E+ DV LH
Sbjct: 213 NLKKKVMGISEELKKYQLQNNPENVRV-----LKDKDFESLKMVVSIVELSDVHNLLILH 267
Query: 195 FP---PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLG--LQLSLEKMGD 249
+ P + ++ K + + + V S G + + L L LE++GD
Sbjct: 268 YENLLPSIMSTEDEDLKNLRDPGNVDLKLYSDI--VKSLNGKNGKLLKECYGLILEELGD 325
Query: 250 E----------LEDPKETPEEMASNFKCAM--------FNSSQAVLQGARHMAAVEISCE 291
L+ P E A + + F++S VL A +M AV+ + E
Sbjct: 326 NMRGNCQVHGVLQKSSRIPREDAFDVRFESTGAEGKPNFSTSDEVLAAANYMLAVQFATE 385
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAID-SFHQFAGVKWLREKPLRKFEDAQWLLIQK 350
P VR+ R F A + T I+ + H K+L+E+P+R +D Q+L +
Sbjct: 386 PSVRRCARESFFRVAHIHVIFTEQSLKEINGNHHHLDSFKFLKEQPVRDLDDDQFLRLVV 445
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSD-CKEHYLSDGVSKSAQL--WNDQRELILKDALDNFL 407
AE++ +L + ++ + + D K + D S + WN +R+ ++ A FL
Sbjct: 446 AEQDGVLSIVFQMKIEGATTSYVDGIKSLFTYDEFSDDEHVKKWNAERQKVIDQAFTKFL 505
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP-DEEAAPRVLACCW 466
LP + KE R + A+ +++ + L N++ V PY+ +D D + R++ +
Sbjct: 506 LPQLEKELRVKLLNDAQEFVVRACCQQLNNRLKVAPYKANFHDEGDWDPKDGIRIMGLSF 565
Query: 467 GPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
K E + +D GE D + + R ++ ++ D L F+ +PHV+
Sbjct: 566 NRDKAEVCVIGVD--GECSDQIRLEHILRRPNTEKEMMDRRRDLNTLKDFIFRKKPHVIA 623
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQL 586
+ A + L +D+ I ++ E+ E +++ D S+ ++ S Q
Sbjct: 624 VSAESREALMLVEDLQTISAQLAEDE------EYPPINVELVDNSVAKIIAKSTRVKTQF 677
Query: 587 PGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMV 646
P + ++ A+++ R LQ+ L +A LC EI++ K P+++ + + + +V
Sbjct: 678 PRNRL-LREAISIARMLQDGLLEIAQLCNADEEIVNVKWHPMQDHVPRKQLLERLHMELV 736
Query: 647 DVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG-AIFTRKDFVTAHGL 705
+ TNQVG+D+N AI+ +QFI GLGPRKA L +L + + R + + +
Sbjct: 737 NETNQVGVDVNRAINHPRTAHLIQFICGLGPRKADDLINTLKKNHQKLKDRNELSSVCHM 796
Query: 706 GKKVFVNAVGFLRVRRSGQ---AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEG 762
G KV +N GF+++ + A S + ++ LD +R+HPE+Y A+++A G
Sbjct: 797 GPKVLINCAGFIKIVSNSPDDGAEPSFEGLEPLDGSRVHPENYDWARQMAVAALKH--HG 854
Query: 763 DLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK---RETLYLIRRELIHGFQD 819
+ D DA++ IE P+ ++ + LD+ + E + + R TL IR EL H ++D
Sbjct: 855 EDADPADAVKKIIE----APERIRDFNLDKAVFEYEHQGHGKIRNTLEDIRSELHHPYKD 910
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQR 861
R+ YK PS + FYM++ ET T G++V ATV Q ++
Sbjct: 911 GRSSYKTPSPLDIFYMVNKETPHTFKIGKLVLATVTGFQHRK 952
>gi|146184871|ref|XP_001030352.2| Zinc knuckle family protein [Tetrahymena thermophila]
gi|146142641|gb|EAR82689.2| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 1504
Score = 239 bits (611), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 287/1274 (22%), Positives = 543/1274 (42%), Gaps = 207/1274 (16%)
Query: 19 DGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIP 78
D E +++E+ WI ++ + + K+ +D++ I FL LHL K ++
Sbjct: 256 DPEELMEETKWISEKIKTI-------KDYKGSKKLNDINF-HSKIFSFLQSLHLDKEEVM 307
Query: 79 FIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLL--QKR 136
+I Y+K E DLE LW ++DLD +W QK
Sbjct: 308 YIYTYKKNEFHPQF-DLED----------------------LWRLYDLDGEWAQFNRQKN 344
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQL--FDSISKSLEAAETEREVDDVDLKF-NL 193
+ LQ ++ RR + T L + + F+ + K E + +D LKF
Sbjct: 345 RILLQI-------QQLRRELENTPLLIQNNIIDFEQVRKVEEFFH--KAIDTQSLKFIKE 395
Query: 194 HFPPGEVGV------DEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
+F + + + ++ +++ ++ + + ++ S S + L L
Sbjct: 396 YFDYLFIKIYPQKEHQRLKIRKDRKTRMINTYIQCKVHKLVSTLTLSPQDLVKNLEEMNQ 455
Query: 248 GDELEDPKETPEEMASNF-----KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF 302
++ + + P+ A N + L+ + E+ P ++K+ +F
Sbjct: 456 INQPQLQQNKPQAYADNLISENPNVPCMKEAIEALECMVDYLSNELFNYPPLKKWYYEMF 515
Query: 303 MDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK 362
++ST PT G ID FH K + ++P F D WLL+++AE + V I
Sbjct: 516 KQKCLISTEPTDLGKKQIDMFHPLYPAKRIHKRPYTSFTDDTWLLLEEAERLNFITVKIF 575
Query: 363 LPED-----SLNKLFSDCKEHYLSDGVSKSAQL------WNDQRELILKDALDNFLLPSM 411
L + N +F ++Y+ + AQ+ WN R+ +++ D F LP
Sbjct: 576 LKSENDNNSDNNSIFDIMSKNYMISLKNLEAQIKQINSEWNFFRKYNIENVCDKFFLPYA 635
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKP 471
R + A+ W++ + + +N ++V P Q+ ++ ++ R+
Sbjct: 636 QSLVRIELHENAEKWVVSQCQQKFYNMINVEP-QKNGKIMSVVQDTNGRI---------- 684
Query: 472 ETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQ---------P 522
V +D +G + + T + DQ S K RL K +H+ P
Sbjct: 685 --GVVFVDENGIPNNSMILNYFTKKE----DQLSTK---ARLEKTQEEHELEIKFKSFGP 735
Query: 523 HVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRIS 582
++V+ A ++ LK+ +++ +E + I YGD+++P++ ++
Sbjct: 736 QLIVVAANSIESQRLKNLLHQ-------------KYEKSQSYIQYGDDTIPQIV--AKQP 780
Query: 583 SDQLPGQ----KGNVKR-AVALGRYLQNPLAMVATLCGPGRE---ILSWKLCPLENFLTP 634
+ Q PG K +V R A++ GR L NP A + +L + L L P + +++
Sbjct: 781 TIQGPGNTLQFKDSVLRVALSQGRILLNPTAEILSLWNDNVQQNGCLHIPLHPSQEYISL 840
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
D+ +E+ V + N +G+++++ + LQ + GLGPRKA L L + IF
Sbjct: 841 DKLQYSLEKCCVQIVNFMGVEMDMLQDQPHLKHLLQHVCGLGPRKALKLIELLEKNAVIF 900
Query: 695 TRKD--------FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
++ +T + VF N GF+R R S D ++ TRI+ + Y
Sbjct: 901 EKEKEVPKKRGLLITQLDIKDVVFKNINGFIRFRFSK---------DPIEKTRINKDLYK 951
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKE----KKRENK 802
+A+++ RD + + E +E+V P + L+ + ++ K + N
Sbjct: 952 IAKKIC-----RDSADNFQIKSQSDEDIVEYVMKNPKYIDAMDLEDYAQQLEEMKNQPNM 1006
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV----- 857
L ++ ELI+ F RN Y+ S + F+ + E+ T +G +V A + ++
Sbjct: 1007 APVLDFVKDELINPFSYKRNTYEAISDQDLFFKMIKESPQTFRKGMIVSAKIIQIRPKEN 1066
Query: 858 ----QGQRAICVLESGL-AGMLMKEDYSDDWRDSEL----------------SDKLHEGD 896
Q Q + ++++ L + +L+ E+ S +++ ++ DK+ D
Sbjct: 1067 QQIKQHQLLVKIVDNDLKSSILVSEEESKNYKVGDIIKAYVDQIFVLDNKRSKDKIIGFD 1126
Query: 897 I--LTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSR----QSEQEKA 950
+ +T K+I+ N LV EMR ++Q L + E + + KA
Sbjct: 1127 VNCVTLTFKAIKFND----LV---REMR--QFQDLDILSTFKFIEAEDKPLGIDVTERKA 1177
Query: 951 RKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVY 1010
+K F+ R I HP F+N++ +A+KLL + GE IIRPSS+G YL +T K +
Sbjct: 1178 KK--------FEPRKIAHPNFKNISITDAVKLLKNAKNGEFIIRPSSKGKQYLAITWKFF 1229
Query: 1011 DGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSY 1070
D V+ H + E K ++ K + +++F++ DE+++RYI P +H+ +
Sbjct: 1230 DDVFVHLSLKEEYGKEKGFQT-----KYVLNDKESFDNFDEIIERYIIPCNNHMNSAKDN 1284
Query: 1071 RKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI-RSTNPHHEYIGLYP 1129
RKF K S E+++ L+ K E P I Y F ++P +L Y + E+I +
Sbjct: 1285 RKFSKKSIEEIEQELKRNKEEQPDIIHYNFCCVPKYPQFIVLLYCSKQDQVTKEWIKVKY 1344
Query: 1130 KGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGW 1189
+GF F ++ F + L+ +F+ P+ ++ ++P+ + + G
Sbjct: 1345 QGFYFHEKYFGQLKDLIKWFKDCFHTPE--YKKYVKKAEEPYASKTPS-----SFSNQGT 1397
Query: 1190 GGSTNEGGWNRDRS 1203
G EGG ++S
Sbjct: 1398 IGIKQEGGVKYEKS 1411
>gi|326470355|gb|EGD94364.1| transcription elongation factor spt6 [Trichophyton tonsurans CBS
112818]
Length = 1206
Score = 239 bits (611), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 217/832 (26%), Positives = 393/832 (47%), Gaps = 57/832 (6%)
Query: 345 WLLIQKAEEEKLLQVTIKLPE-DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDA 402
+L + KAEEE L+ + + + D+ K L+ + + SD S+ A WN +R+ +L A
Sbjct: 391 FLRMLKAEEEGLVDIKVHFKDFDNFKKRLYPEIQ----SDNSSEVADAWNKERKDVLDLA 446
Query: 403 LDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVL 462
L L M K + + ++ + E + ++ PY+ K + PRVL
Sbjct: 447 LSK-LEKIMSKGVKENIRSECENHVARECREVFSTRLDQAPYKPKGMILG----TIPRVL 501
Query: 463 ACCWGPG---KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
A G G K + ++ G V++ LTL + K D E ++ +
Sbjct: 502 ALTNGSGIVGKDPIYWTWVEEDGRVLEHGKFVDLTLGDPDRMIADGK--DVEAFVELVER 559
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFK-------MVEEHPRDVGHEMDELSIVYGDESL 572
+P V+ + + L + E++ +E +V D L +V ++ +
Sbjct: 560 RKPDVIGVSGQSPETRKLYKQLSELVQAKDLRGAFYTDERDEEVS---DILEVVIVNDEV 616
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFL 632
RLY+ SR + PG + VAL +YLQNP+ A+L GR+++S + P + +
Sbjct: 617 ARLYQTSRRAEVDHPGFSLQSRYCVALAKYLQNPMKEYASL---GRDVVSIQFRPGQQLI 673
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAG 691
D+ +E +VD+ N VG+DIN A+ L +ISGLGPRKA+ L + + + G
Sbjct: 674 PQDKLLKQLETALVDMVNLVGVDINEAVSDVSTANLLTYISGLGPRKASQLLKVINMNGG 733
Query: 692 AIFTRKDFVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
+ +R + + + +G KV+ N FL + + D LD+TR+HPE Y +
Sbjct: 734 VVNSRMELLGVNAQYPAMGVKVWNNCASFLYIDYDNADPDT----DYLDNTRVHPEDYDI 789
Query: 748 AQELAK---EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKEKKREN 801
+++A E+ DI+ + +++ + D D + LL+ + ++ +
Sbjct: 790 GRKIAADALELDEEDIKAETDENGQGAIVRKLIKEDAQDKVNDLLLEEYAEQLENNLNQR 849
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQR 861
KR TL IR EL +++ R Q+ D F M +GET ++LA+G +V T++RV
Sbjct: 850 KRATLETIRAELQQPYEELRKQFVFLGTDAIFTMFTGETAESLAQGMIVPITIKRVSDDH 909
Query: 862 AICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM 921
L+ G+ ++ + + +D + D + KI + + + + RE ++
Sbjct: 910 IDGKLDCGIGALVPESEMTDRY-DIPIRSLYAPHQTTLAKITYLNRKSFVANVSLREDQV 968
Query: 922 RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMK 981
N Y+ + LD E ++ E ++A KEK + R+I HP F+ +A +
Sbjct: 969 -NKPYR--RQLDHMRGEWDEDQEREDQEAMKEKTQTDQR-ALRVIKHPLFRPFNGRQAEE 1024
Query: 982 LLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI 1041
L+ + G+ +IRPSS+G +L +T KV DGVY H D++E KD++ +G+ LKI
Sbjct: 1025 FLAPQSRGDVVIRPSSKGHDHLAVTWKVADGVYQHIDVLELDKDNE-----FTVGRILKI 1079
Query: 1042 -GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGF 1100
G+ ++ DLDE++ ++ + + M + K++ G+K + L P R Y F
Sbjct: 1080 GGKYSYTDLDELIVNHVKAMAKKVDDMTVHEKYQSGTKEATEGWLTTYTTANPKRSAYAF 1139
Query: 1101 GISHEHPGTFILTYIRSTN-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ +HPG F L + P + + + + P+G++ ++ + D+ L F+
Sbjct: 1140 CLDTKHPGYFHLCFKAGLKAPLNSWPVKVIPQGYELQRTPYPDMRALCNGFK 1191
>gi|299473222|emb|CBN78798.1| GTB1; RNA binding / hydrolase, acting on ester bonds, also similar to
transcription elogantion facto [Ectocarpus siliculosus]
Length = 1538
Score = 239 bits (610), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 216/810 (26%), Positives = 366/810 (45%), Gaps = 117/810 (14%)
Query: 216 YSSCSKAGLWEVASKFGYSSEQLGLQLS-LEKMGDELEDPKETPEEMASNFKCA----MF 270
Y + +AGL +A+KF ++ QLG ++ + + + P E E +AS+ K A +F
Sbjct: 704 YRAARQAGLRGLANKFSITAAQLGEVVTGISQRYFPVPTPPEAVELVASDMKGAEDTPLF 763
Query: 271 NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVK 330
+SS+++LQG RH+ A EI+ EP V+ R+ + A+VST PT G ID+FH G+
Sbjct: 764 SSSESILQGVRHILAREIALEPRVKAKCRATYRRYALVSTTPTAKGKEEIDAFHPLYGLH 823
Query: 331 WLREKPLRKF------EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL---------FSDC 375
+L K + +F + QWL I+K + E LL I P++ + L F
Sbjct: 824 YLDRKAISEFLSTHGSDRTQWLQIEKGKAEGLLTYVIHPPDNKVQSLDENGEMMTTFELN 883
Query: 376 KEHYL---------SDGVSKSA-QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKS 425
K+ +L GVS + Q W+ QR L+L +AL L+P++ E + +++
Sbjct: 884 KKAFLDLLKPTYNPEGGVSSAVKQGWDHQRNLVLHEALVEHLIPALETEVVFELKAASRA 943
Query: 426 WLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAP--------RVLAC-CWGPGKPETTFV 476
++ E L +++ VGPY+R D ++ A RV+ + E+
Sbjct: 944 AVVEEASTCLASRLMVGPYERDDLNVFQKVTKADSSLKNDQVRVVGIFVSSDSREESWAA 1003
Query: 477 MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG-AVNLSCT 535
+D SG V+D L+ RD ++KK L F+ ++PHVV + + +
Sbjct: 1004 AIDPSGSVLD-------HLQIPRSRDLRAKK-----LKAFIKSNRPHVVCVSTSAGQASR 1051
Query: 536 SLKDDIYE------------IIFKMVEEHPRDVGHEM---------DELSIVYGDESLPR 574
+ D + + ++ E+ R+ G + S+ + +
Sbjct: 1052 YMMDTLVDRRSGQNGEPKTGVLADAHREYQRERGDYDDQDEEEEVWKQCSLAPVKDDVAC 1111
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP-------GREILSWKLCP 627
++ S + N + AVAL RYLQ+PL A + G E+ S +L
Sbjct: 1112 VFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHA 1171
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
L++ + P + + M+D + VG+DIN A E LQF+ GLGPRKA L+ L
Sbjct: 1172 LQDQVPPQQLLKVWTHRMMDAVSAVGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERL 1231
Query: 688 --VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ-FIDLLDDTRIHPES 744
V G + +RK +++ L V+ NA GFLR+R G+ A + +D DDTR+HPE
Sbjct: 1232 GTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPEC 1291
Query: 745 YGL---AQELAKEVYNRDIEGD--------LNDDEDALE-------------MAIEHVRD 780
Y AQ + + +E D ++D +AL+ M ++ D
Sbjct: 1292 YNTQDWAQRICANALDVQVEDDYFPIVESAMDDSREALQRLCQQGESGVDPRMPPNNLND 1351
Query: 781 RPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
+ L ++ + + + L I E+ + ++D R Y P +DE F ++GET
Sbjct: 1352 SVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRDRRMPYSTPGEDELFEWLTGET 1411
Query: 841 EDTLAEGRVVQATVRRVQGQRAICVLES--GLAGMLMKEDYSDDW--------RDSELSD 890
+ TL EG +V + R LE GL G + + +DD + ++L
Sbjct: 1412 DATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKG 1471
Query: 891 KLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
+ E ++ I + K R+++ L R+S+
Sbjct: 1472 VVKENQLMEAAIIKVDKGRFELKLSLRKSD 1501
>gi|50304173|ref|XP_452036.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636996|sp|Q6CVK3.1|SPT6_KLULA RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Chromatin elongation factor SPT6
gi|49641168|emb|CAH02429.1| KLLA0B11385p [Kluyveromyces lactis]
Length = 1460
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 232/941 (24%), Positives = 415/941 (44%), Gaps = 70/941 (7%)
Query: 208 KRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNF- 265
K+ +++ Y + L++ + G ++EQ+G +S E ++ ++ P P + +N
Sbjct: 493 KKHLKNSSYEKFKASALYQAINDTGITAEQVGENISAEHQLHPVVDHPSLKPTDSVANIL 552
Query: 266 ------KCAMFNSS-QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
+F+ + + L+ A+E+S P VR+ +R F +V T G
Sbjct: 553 EGPEAKDLQIFSQNPKLALETIEKYYALELSKNPKVRQKIRDDFYKYYIVDVALTSKGRK 612
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL----LQVTIKLPEDSLNKLFSD 374
I + +K+ + F + ++ E E L +Q+ + + N LF
Sbjct: 613 EIQRGSPYEDIKYALGRTPAHFRSEPDVFLRMLEAESLHLMNIQIHVSSQDQYTNHLFQT 672
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
E + S+ A WN R AL N + + +E + + +
Sbjct: 673 SLE---TSNTSEIASEWNSFRRDAFDSAL-NKVFSDVSQEIKDELKKTCLRLVTKSVRHQ 728
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLT 494
K+ P+ P + PRVL G GK + D + L
Sbjct: 729 FMFKLDQAPFIP-----NPKDPKIPRVLTITCGQGKFGS------------DAIIAVYLN 771
Query: 495 LRSQNVRDQQSKKNDQER--------LLKFMMDH-QPHVVVLGAVNLSCTSLKDDIYEII 545
+++ VRD + +N +R L ++ H QP+V+ + N S L I EI+
Sbjct: 772 RKTEFVRDYKIVENPFDRKEPELFENALDDIIQHCQPNVIGINGPNPSTQRLYKKIQEIV 831
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
K + V + + ++Y ++ + Y++S ++ + P + VK +ALGRY+ +
Sbjct: 832 QK-----KQIVDNRGSHVPVIYVEDEVAVRYQSSERAAQEFPSKPTLVKYCIALGRYIHS 886
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PL A L E+LS + ++ LT + +E VD+ N VG+++N A +
Sbjct: 887 PLLEYANLTN--EELLSLSIHSHQSLLTRELFLQALETSFVDIVNLVGIEVNKATDNHYY 944
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAG-AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
L++I+G G RK+A SL R + R+ +T L K +F+N+ FL + + +
Sbjct: 945 AKALRYIAGFGRRKSADFLESLQRLNEPLLARQQLITHDILTKTIFMNSAAFLYISWNEK 1004
Query: 725 AASSSQF-IDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRP 782
D LD TRIHPE Y LA ++A + D + +E + IE +R+ P
Sbjct: 1005 NQRYEDLEHDQLDGTRIHPEDYHLATKVAADALEFDPDAIAEKEEQGTMSEFIELLREDP 1064
Query: 783 DL---LKTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMI 836
D L++ L+ + +E ++ + K L I EL+ GF++ RN + DE F +
Sbjct: 1065 DRRTKLESLNLEAYAEELEKNTGQRKLNNLNTIVLELLEGFEELRNDFHPLHGDEVFKSL 1124
Query: 837 SGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGD 896
+GE+E T +G ++ V R + V SG+ ++ + + + G
Sbjct: 1125 TGESEKTFFKGCIIPVRVERFRHNDIYGVTNSGVECVINAQRHIGAQLKRPAEEVYEIGK 1184
Query: 897 ILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPY---YHEERSSRQSEQEKARKE 953
K+ I + + E ++R + DP +E ++ E++ A +E
Sbjct: 1185 TYPAKVIYIDYDNISCEVSLLEHDIRRQYVPIHYSKDPSIWNVEQEMKDQEIEKKLALEE 1244
Query: 954 KELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGV 1013
+ H R+I HP + N T +A L ++E G+ +IR SSRG +L +T K+ +
Sbjct: 1245 ARAKRTH---RVINHPYYGNFTGPQAEDYLRSRERGDFVIRQSSRGDDHLAITWKLDKDL 1301
Query: 1014 YAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKF 1073
+ H DI+E KD ++ + +GKTL + + + DLD+++ Y+ V L + S KF
Sbjct: 1302 FQHVDILE-----KDKENPLALGKTLIVEDQKYHDLDQIIVEYLQNKVRLLNEITSNEKF 1356
Query: 1074 RKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
+KG+K EV + + P R VY F ++EHPG F L +
Sbjct: 1357 KKGTKKEVIKFIEDYSKVNPNRSVYYFSFNYEHPGWFYLMF 1397
>gi|367015736|ref|XP_003682367.1| hypothetical protein TDEL_0F03450 [Torulaspora delbrueckii]
gi|359750029|emb|CCE93156.1| hypothetical protein TDEL_0F03450 [Torulaspora delbrueckii]
Length = 1456
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 252/1091 (23%), Positives = 464/1091 (42%), Gaps = 89/1091 (8%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ I + + + L++PFI YR+ N +++ D F T
Sbjct: 375 AYDLTEFKECIGNAIKFISQENLEVPFIYAYRR------------NYISSREKDGFVLT- 421
Query: 113 TLKWHKVLWAIHDLDKKWL-LLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSI 171
LW I LD ++ ++ KR Y KK Y+E L + + D
Sbjct: 422 ----EDDLWEIVSLDIEFHSIIYKR-----DYVKKFYQE----------LNVTDPIVDEY 462
Query: 172 SKSLEAAETEREVDDVDLKFNLHFPPGEVGVD---EGQYKRPKRSTKYSSCSKAGLWEVA 228
K+ T D+ L F + D K+ +++ Y + L++
Sbjct: 463 FKNQSTGSTAELNSLQDVYSYLEFTYAQEINDLLSRNSGKKHLKNSSYEKFKSSALYQAV 522
Query: 229 SKFGYSSEQLGLQL-SLEKMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGA 280
G +++ +G + S ++ ++ P P+E+ + A +F S ++ L
Sbjct: 523 GDIGITAQHVGENINSQHQINVPVDHPTLRPQEVIESILSANSADLQVFTSNTKLALDTV 582
Query: 281 RHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF 340
+ A+EIS VR+ VRS F + T G I + +K+ ++ + F
Sbjct: 583 KKYYALEISKNTKVREKVRSDFYKYYLADVILTSKGKREIQRGSIYEDIKYAIKRTPQHF 642
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
+ ++ E E L +T+++ S ++ +F E + S+ A WN+ R+
Sbjct: 643 RRDPDVFLRMLEAESLNLMTVRIHMSSQAQYIDHMFQIALE---TTNTSQLATEWNNFRK 699
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
A++ + + +E + +S + + K+ PY P +
Sbjct: 700 AAFDQAMEK-IFSDISREIKDDLSKTCEKLVAKTIRHKFMTKLDQAPYVP-----NPKDP 753
Query: 457 AAPRVLACCWGPGK---PETTFVMLDSSGEVV-DVLFTGCLTLRSQNVRDQQSKKNDQER 512
P+VL G G+ V L+ GE V D N D+ + + +E
Sbjct: 754 KIPKVLTLTCGQGRFGADAIIAVFLNRKGEYVRDYKIVD-------NPFDRSNPEKFEET 806
Query: 513 LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESL 572
L + + QP+ + + N + E+I K R GH + I+Y ++ +
Sbjct: 807 LDDIIQNCQPNAIGINGPNPKSQKFYKRLQEVIHKKQVVDSR--GHT---IPILYIEDEV 861
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFL 632
Y+NS ++ + P + VK +ALGRY+ +PL L E+ S + P ++ L
Sbjct: 862 AVRYQNSERAAQEFPNKPPLVKYCIALGRYMHSPLNEYGNLST--EELGSLAIHPHQSLL 919
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG- 691
++ +E VD+ N VG+++N A + + L++ISG G RKA SL R
Sbjct: 920 PREKLLKALETAFVDIVNLVGVEVNKATDSSYYASVLKYISGFGKRKAIDFLESLQRLNE 979
Query: 692 AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQE 750
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA +
Sbjct: 980 PLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLATK 1039
Query: 751 LAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKR---ENKR 803
+A + D + +E + IE +R+ P+ L++ L+ + +E ++ + K
Sbjct: 1040 VAADALEYDPDAIAEKEEQGTMSEFIEILREDPERRSKLESLNLESYAEELEKNTGQRKL 1099
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAI 863
L I EL+ GF++ RN + +E F ++GE E T +G +V V R + +
Sbjct: 1100 NNLNTIVLELLDGFEELRNDFHPLHGEEIFQSLTGENEKTFFKGAIVPVRVERFRHNDIM 1159
Query: 864 CVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN 923
CV S + ++ + ++ D G K+ I + E ++++
Sbjct: 1160 CVTNSLVECIVNAQRHAGAQYKRPPGDIYEIGKTYPSKVVFIDYENITAEVSLLEQDVKH 1219
Query: 924 NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLL 983
+ DP + + + +E+ + A+ R+I HP + +A L
Sbjct: 1220 QYVPVNYSKDPSIWDLKQELEDSEEEKKITMAEARAKRTHRVINHPYYVPFNGKQAEDYL 1279
Query: 984 SAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGE 1043
+KE G+ +IR SSRG +L +T K+ ++ H DI E K++ + +G+ L +
Sbjct: 1280 RSKERGDFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELDKENP-----LALGRVLVVEN 1334
Query: 1044 DTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGIS 1103
+ DLD+++ Y+ V L + S KF++G+K EV + + P R VY F +
Sbjct: 1335 QRYHDLDQIIVEYLQNKVRLLNEITSNEKFKRGNKKEVIKFIEDYSKVNPNRSVYYFCFN 1394
Query: 1104 HEHPGTFILTY 1114
+ +PG F L +
Sbjct: 1395 YSNPGWFYLMF 1405
>gi|6321552|ref|NP_011631.1| Spt6p [Saccharomyces cerevisiae S288c]
gi|134854|sp|P23615.1|SPT6_YEAST RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Chromatin elongation factor SPT6
gi|172682|gb|AAA35086.1| SPT6 protein [Saccharomyces cerevisiae]
gi|1323187|emb|CAA97124.1| SPT6 [Saccharomyces cerevisiae]
gi|285812308|tpg|DAA08208.1| TPA: Spt6p [Saccharomyces cerevisiae S288c]
gi|392299371|gb|EIW10465.1| Spt6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1451
Score = 236 bits (603), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 244/1097 (22%), Positives = 468/1097 (42%), Gaps = 88/1097 (8%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ I + + + L++PFI YR+ N +++ D F
Sbjct: 364 NYDLTEFKEAIGNAIKFITKENLEVPFIYAYRR------------NYISSREKDGF---- 407
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
L LW I LD ++ L +K +Q +Y + + ++ + + + +
Sbjct: 408 -LLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDP---------IVTEYFKNQNT 457
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEG--QYKRPKRSTKYSSCSKAGLWEVASK 230
S+ + +++ D L+F E+ ++ K+ +++ Y + L++ S
Sbjct: 458 ASIAELNSLQDIYDY-LEFKYANEINEMFINHTGKTGKKHLKNSSYEKFKASPLYQAVSD 516
Query: 231 FGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGARH 282
G S+E +G +S + ++ ++ P P E+ + A +F S ++ + +
Sbjct: 517 IGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNANSGDLQVFTSNTKLAIDTVQK 576
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
++E+S +R+ VRS F + T G I + +K+ + F
Sbjct: 577 YYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRR 636
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+ ++ E E L +++KL S + LF E + S A WN+ R+L
Sbjct: 637 DPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALE---TTNTSDIAIEWNNFRKLA 693
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
A+D + + +E + ++ + + K+ P+ D
Sbjct: 694 FNQAMDK-IFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRD-----PKI 747
Query: 459 PRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER--- 512
P++L+ G G+ V ++ G+ + R + D K + E+
Sbjct: 748 PKILSLTCGQGRFGADAIIAVYVNRKGDFI----------RDYKIVDNPFDKTNPEKFED 797
Query: 513 -LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
L + QP+ + + N + E++ K R GH + I+Y ++
Sbjct: 798 TLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSR--GHT---IPIIYVEDE 852
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+ Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P +N
Sbjct: 853 VAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTS--EEVRSLSIHPHQNL 910
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +SL R
Sbjct: 911 LSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLN 970
Query: 692 A-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQ 749
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA
Sbjct: 971 EPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLAT 1030
Query: 750 ELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKREN---K 802
++A + D + +E + IE +R+ PD L++ L+ + +E ++ K
Sbjct: 1031 KVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRK 1090
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
L I EL+ GF++ RN + DE F ++GE+E T +G ++ V R
Sbjct: 1091 LNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHNDI 1150
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR 922
IC S + ++ + ++ ++ G K+ I + + +++
Sbjct: 1151 ICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEVSLLDHDVK 1210
Query: 923 NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
+ DP + + + +E+ + A+ R+I HP + +A
Sbjct: 1211 QQYVPISYSKDPSIWDLKQELEDAEEERKLMMAEARAKRTHRVINHPYYFPFNGRQAEDY 1270
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L +KE GE +IR SSRG +L +T K+ ++ H DI E K++ + +GK L +
Sbjct: 1271 LRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENP-----LALGKVLIVD 1325
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+ DLD+++ Y+ V L M S KF+ G+K +V + + P + VY F +
Sbjct: 1326 NQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVKFIEDYSRVNPNKSVYYFSL 1385
Query: 1103 SHEHPGTFILTYIRSTN 1119
+H++PG F L + + N
Sbjct: 1386 NHDNPGWFYLMFKINAN 1402
>gi|1945326|emb|CAA97127.1| SPT6 [Saccharomyces cerevisiae]
Length = 1367
Score = 236 bits (602), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 244/1097 (22%), Positives = 468/1097 (42%), Gaps = 88/1097 (8%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ I + + + L++PFI YR+ N +++ D F
Sbjct: 280 NYDLTEFKEAIGNAIKFITKENLEVPFIYAYRR------------NYISSREKDGF---- 323
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
L LW I LD ++ L +K +Q +Y + + ++ + + + +
Sbjct: 324 -LLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDP---------IVTEYFKNQNT 373
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEG--QYKRPKRSTKYSSCSKAGLWEVASK 230
S+ + +++ D L+F E+ ++ K+ +++ Y + L++ S
Sbjct: 374 ASIAELNSLQDIYDY-LEFKYANEINEMFINHTGKTGKKHLKNSSYEKFKASPLYQAVSD 432
Query: 231 FGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGARH 282
G S+E +G +S + ++ ++ P P E+ + A +F S ++ + +
Sbjct: 433 IGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNANSGDLQVFTSNTKLAIDTVQK 492
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
++E+S +R+ VRS F + T G I + +K+ + F
Sbjct: 493 YYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRR 552
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+ ++ E E L +++KL S + LF E + S A WN+ R+L
Sbjct: 553 DPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALE---TTNTSDIAIEWNNFRKLA 609
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
A+D + + +E + ++ + + K+ P+ D
Sbjct: 610 FNQAMDK-IFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRD-----PKI 663
Query: 459 PRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER--- 512
P++L+ G G+ V ++ G+ + R + D K + E+
Sbjct: 664 PKILSLTCGQGRFGADAIIAVYVNRKGDFI----------RDYKIVDNPFDKTNPEKFED 713
Query: 513 -LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
L + QP+ + + N + E++ K R GH + I+Y ++
Sbjct: 714 TLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSR--GHT---IPIIYVEDE 768
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+ Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P +N
Sbjct: 769 VAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTS--EEVRSLSIHPHQNL 826
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +SL R
Sbjct: 827 LSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLN 886
Query: 692 A-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQ 749
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA
Sbjct: 887 EPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLAT 946
Query: 750 ELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKREN---K 802
++A + D + +E + IE +R+ PD L++ L+ + +E ++ K
Sbjct: 947 KVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRK 1006
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
L I EL+ GF++ RN + DE F ++GE+E T +G ++ V R
Sbjct: 1007 LNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHNDI 1066
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR 922
IC S + ++ + ++ ++ G K+ I + + +++
Sbjct: 1067 ICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEVSLLDHDVK 1126
Query: 923 NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
+ DP + + + +E+ + A+ R+I HP + +A
Sbjct: 1127 QQYVPISYSKDPSIWDLKQELEDAEEERKLMMAEARAKRTHRVINHPYYFPFNGRQAEDY 1186
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L +KE GE +IR SSRG +L +T K+ ++ H DI E K++ + +GK L +
Sbjct: 1187 LRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENP-----LALGKVLIVD 1241
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+ DLD+++ Y+ V L M S KF+ G+K +V + + P + VY F +
Sbjct: 1242 NQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVKFIEDYSRVNPNKSVYYFSL 1301
Query: 1103 SHEHPGTFILTYIRSTN 1119
+H++PG F L + + N
Sbjct: 1302 NHDNPGWFYLMFKINAN 1318
>gi|327200638|pdb|3PSI|A Chain A, Crystal Structure Of The Spt6 Core Domain From Saccharomyces
Cerevisiae, Form Spt6(239-1451)
Length = 1219
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 244/1097 (22%), Positives = 468/1097 (42%), Gaps = 88/1097 (8%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ I + + + L++PFI YR+ N +++ D F T
Sbjct: 132 NYDLTEFKEAIGNAIKFITKENLEVPFIYAYRR------------NYISSREKDGFLLT- 178
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
LW I LD ++ L +K +Q +Y + + ++ + + + +
Sbjct: 179 ----EDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDP---------IVTEYFKNQNT 225
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEG--QYKRPKRSTKYSSCSKAGLWEVASK 230
S+ + +++ D L+F E+ ++ K+ +++ Y + L++ S
Sbjct: 226 ASIAELNSLQDIYDY-LEFKYANEINEMFINHTGKTGKKHLKNSSYEKFKASPLYQAVSD 284
Query: 231 FGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGARH 282
G S+E +G +S + ++ ++ P P E+ + A +F S ++ + +
Sbjct: 285 IGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNANSGDLQVFTSNTKLAIDTVQK 344
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
++E+S +R+ VRS F + T G I + +K+ + F
Sbjct: 345 YYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRR 404
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+ ++ E E L +++KL S + LF E + S A WN+ R+L
Sbjct: 405 DPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALE---TTNTSDIAIEWNNFRKLA 461
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
A+D + + +E + ++ + + K+ P+ D
Sbjct: 462 FNQAMDK-IFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRD-----PKI 515
Query: 459 PRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER--- 512
P++L+ G G+ V ++ G+ + R + D K + E+
Sbjct: 516 PKILSLTCGQGRFGADAIIAVYVNRKGDFI----------RDYKIVDNPFDKTNPEKFED 565
Query: 513 -LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
L + QP+ + + N + E++ K R GH + I+Y ++
Sbjct: 566 TLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSR--GHT---IPIIYVEDE 620
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+ Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P +N
Sbjct: 621 VAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTS--EEVRSLSIHPHQNL 678
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +SL R
Sbjct: 679 LSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLN 738
Query: 692 -AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQ 749
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA
Sbjct: 739 EPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLAT 798
Query: 750 ELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKREN---K 802
++A + D + +E + IE +R+ PD L++ L+ + +E ++ K
Sbjct: 799 KVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRK 858
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
L I EL+ GF++ RN + DE F ++GE+E T +G ++ V R
Sbjct: 859 LNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHNDI 918
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR 922
IC S + ++ + ++ ++ G K+ I + + +++
Sbjct: 919 ICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEVSLLDHDVK 978
Query: 923 NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
+ DP + + + +E+ + A+ R+I HP + +A
Sbjct: 979 QQYVPISYSKDPSIWDLKQELEDAEEERKLMMAEARAKRTHRVINHPYYFPFNGRQAEDY 1038
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L +KE GE +IR SSRG +L +T K+ ++ H DI E K++ + +GK L +
Sbjct: 1039 LRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENP-----LALGKVLIVD 1093
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+ DLD+++ Y+ V L M S KF+ G+K +V + + P + VY F +
Sbjct: 1094 NQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVKFIEDYSRVNPNKSVYYFSL 1153
Query: 1103 SHEHPGTFILTYIRSTN 1119
+H++PG F L + + N
Sbjct: 1154 NHDNPGWFYLMFKINAN 1170
>gi|401625626|gb|EJS43625.1| spt6p [Saccharomyces arboricola H-6]
Length = 1451
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 248/1098 (22%), Positives = 477/1098 (43%), Gaps = 92/1098 (8%)
Query: 54 HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT 113
+DL+ ++ I + + + L++PFI YR+ N +++ D F
Sbjct: 365 YDLTEFKEAIGNAIKFVTKENLEVPFIYAYRR------------NYISSREKDGF----- 407
Query: 114 LKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK 173
L LW I LD ++ L +K ++ +Y++ + ++ +++ + +
Sbjct: 408 LLTEDDLWDIVSLDIEFHSLVNKKDYVERFYEELHVDDP---------IVSEYFKNQNTA 458
Query: 174 SLEAAETEREVDDVDLKFNLHFPPGEVGVDE-GQY-KRPKRSTKYSSCSKAGLWEVASKF 231
S+ + +++ D L+F E+ ++ G+ K+ +++ Y + L++ +
Sbjct: 459 SIAELNSLQDIYDY-LEFKYANEINEMFINHTGKTGKKHLKNSSYEKFKASPLYQAVNDI 517
Query: 232 GYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGARHM 283
G S+E +G +S + ++ ++ P P E+ + A +F S ++ + A+
Sbjct: 518 GISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNANSGDLQVFTSNTKLAIDTAQKY 577
Query: 284 AAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW-LREKPLRKFED 342
++E+S +R+ VRS F + T G I + +K+ + P+ D
Sbjct: 578 YSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRRD 637
Query: 343 AQ-WLLIQKAEEEKLLQVTIKLPEDS--LNKLFSDCKEHYLSDGVSKSAQLWNDQRELIL 399
+L + +AE LL V + + S + LF E + S A WN+ R+L
Sbjct: 638 PDVFLRMIEAESLNLLSVKLHMSSQSQYIEHLFQIALE---TTNTSDIAVEWNNFRKLAF 694
Query: 400 KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD--EEA 457
A+D + + +E + ++ + + K+ P+ P+ E
Sbjct: 695 NQAMDK-IFQDISQEVKDNLTKNCQKLVSKTVRHKFMTKLDQAPF-------IPNVREPK 746
Query: 458 APRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER-- 512
P++LA G G+ V ++ G+ V R + D K + E+
Sbjct: 747 IPKILALTCGQGRFGADAIIAVYVNRKGDFV----------RDYKIVDNPFDKMNPEKFE 796
Query: 513 --LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDE 570
L + QP+ + + N + E++ K R GH + I+Y ++
Sbjct: 797 GTLDNIIQSCQPNAIGINGPNPKTQKFYKKLQEVLHKKQIVDSR--GHT---IPIIYVED 851
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLEN 630
+ Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P +N
Sbjct: 852 EVAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLSN--EEVKSLSIHPHQN 909
Query: 631 FLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA 690
L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +SL R
Sbjct: 910 LLSQEQLTWALETAFVDIVNLVSVEVNRATDNNYYASALKYISGFGKRKAIDFLQSLQRL 969
Query: 691 GA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLA 748
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA
Sbjct: 970 NEPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLA 1029
Query: 749 QELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKREN--- 801
++A + D + +E + IE +R+ PD L++ L+ + +E ++
Sbjct: 1030 TKVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLR 1089
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQR 861
K L I EL+ GF++ RN + DE F ++GE+E T +G ++ V R
Sbjct: 1090 KLNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHND 1149
Query: 862 AICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM 921
IC S + ++ + ++ ++ G K+ I + + ++
Sbjct: 1150 IICTTNSEVECIVNAQRHAGAQYRRPANEIYEIGKTYPAKVIYIDYANITAEVSLLDHDV 1209
Query: 922 RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMK 981
+ + DP + + + +E+ + A+ R+I HP + +A
Sbjct: 1210 KQQYVPISYSKDPSIWDLKQELEDAEEERKLMMAEARAKRTHRVINHPYYFPFNGRQAED 1269
Query: 982 LLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI 1041
L +KE GE +IR SSRG +L +T K+ ++ H DI E K++ + +GK L +
Sbjct: 1270 YLRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENP-----LALGKVLVV 1324
Query: 1042 GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFG 1101
+ DLD+++ Y+ V L M S KF+ G+K +V + + P + VY F
Sbjct: 1325 ENQRYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVKFIEDYSRVNPNKSVYYFS 1384
Query: 1102 ISHEHPGTFILTYIRSTN 1119
+++++PG F L + + N
Sbjct: 1385 LNYDNPGWFYLMFKINAN 1402
>gi|410075053|ref|XP_003955109.1| hypothetical protein KAFR_0A05390 [Kazachstania africana CBS 2517]
gi|372461691|emb|CCF55974.1| hypothetical protein KAFR_0A05390 [Kazachstania africana CBS 2517]
Length = 1448
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 218/939 (23%), Positives = 432/939 (46%), Gaps = 57/939 (6%)
Query: 208 KRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNF- 265
K+ ++T Y + L++ + G +++ +G +S + ++ + ++ P E+ +
Sbjct: 492 KKHLKNTSYEKFKNSPLYQAIKEIGITADDVGENVSSQHQIHNAVDHATSKPLEVIESVV 551
Query: 266 -----KCAMF-NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSA 319
+ +F N+ ++ + ++E+S VR+ VRS F +V T T G +
Sbjct: 552 KENLTELQVFSNNLGLAMETVKKYYSLELSKNIKVREKVRSDFYRYYLVDTVLTKKGKNE 611
Query: 320 IDSFHQFAGVKW-LREKPLRKFEDAQ-WLLIQKAEEEKLLQVTIKLPEDS--LNKLFSDC 375
I + +K+ + P+ D +L + +AE LL + I + ++ LF
Sbjct: 612 IQRGSPYEDIKYAINRTPMHFRRDPDIFLRMLEAENLNLLNIKIHMSSQGQYIDHLFQIA 671
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
E + S+ A WN+ R+ K+A+++ + + +E + ++ + +
Sbjct: 672 LE---TTNTSELATEWNEFRKAAFKEAMEH-IFSDISREIKDDLTKTCQKLVAKVVRHKF 727
Query: 436 WNKVSVGPY--QRKDNDITPDEEAAPRVLACCWGPGK---PETTFVMLDSSGEVVDVLFT 490
K+ P+ KD I P+VL+ G G+ V L+ G++V
Sbjct: 728 MTKLDQAPFIPNLKDPKI-------PKVLSLTCGQGRFGSDAIIAVFLNRKGDLVKDFKI 780
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
+N D+ + + +++L + + Q + + + N + E+I K +
Sbjct: 781 ------VENPFDKNNAQAFEDKLDEIIQTCQANAIGINGPNPKTEKFYKKVLEVIHK--K 832
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
+ + GH + ++Y ++ + Y++S+ ++D+ P + VK +AL RY+ +PL
Sbjct: 833 QIVDNRGHS---IPVIYVEDEVALRYQSSKRAADEFPNKPTLVKYCIALARYMHSPLLEY 889
Query: 611 ATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
A L E+ S + PL++ L D +E VD+ N VG++IN A ++ + L+
Sbjct: 890 ANLSI--EELTSLAIHPLQSLLPYDILKSALESAFVDIVNLVGVEINKATDNDYYASALK 947
Query: 671 FISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
+ISG G RKA +SL R + R+ +T + L K +F+N+ GFL + + +
Sbjct: 948 YISGFGRRKAIDFIQSLHRLNEPLLARQQLITHNILHKTIFMNSAGFLYISWNDKRQRYE 1007
Query: 730 QF-IDLLDDTRIHPESYGLAQELAKEV--YNRDIEGDLNDDEDALEMAIEHVRDRPDL-- 784
D LD TRIHPE Y LA ++A + Y+ D + +D+ ++ I+ ++ PD
Sbjct: 1008 DVEHDQLDSTRIHPEDYHLATKVAADALEYDPDTIAE-KEDQGSMSEFIDLLKKDPDCRT 1066
Query: 785 -LKTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
L++ LD++ ++ + + K L I EL+ GF++ RN + +E F+ +SGET
Sbjct: 1067 KLESLNLDQYAEQLESSTGQRKLNNLSTIVLELLDGFEELRNDFHPLQGEEIFHSLSGET 1126
Query: 841 EDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTC 900
E T +G ++ V R C+ S + ++ + ++ ++ G
Sbjct: 1127 EKTFFKGCIIPVRVERFWHNDIKCITNSEVDCIVNAQRHAGAQYKRPANEIYEIGKTYPA 1186
Query: 901 KIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKH 960
K+ I + E ++++ + DP + + + +E+ + E A+
Sbjct: 1187 KVIYIDYANISAEVSLLEHDIKHEYVPINYSKDPAIWDIQQEMKDLEEEKKITTERARAK 1246
Query: 961 FKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDII 1020
R+I HP + +A L +K+ G+ +IR SSRG +LT+T K+ ++ H DI
Sbjct: 1247 RTHRVINHPYYFPFNGRQAEDYLRSKDRGDFVIRQSSRGDDHLTVTWKLDRDLFEHIDIK 1306
Query: 1021 EGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAE 1080
E K++ + +GK L + + DLD+++ ++ + L M S KF+KG+ E
Sbjct: 1307 ELEKENP-----LALGKVLVVDGQRYHDLDQLIVEFLQQKIRLLNEMTSNEKFKKGTPKE 1361
Query: 1081 VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
V + + P + VY F ++++HPG F + + + N
Sbjct: 1362 VTKFIEDYSKVNPKKSVYYFSLNYDHPGWFFINFKINAN 1400
>gi|365982057|ref|XP_003667862.1| hypothetical protein NDAI_0A04630 [Naumovozyma dairenensis CBS 421]
gi|343766628|emb|CCD22619.1| hypothetical protein NDAI_0A04630 [Naumovozyma dairenensis CBS 421]
Length = 1452
Score = 234 bits (597), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 247/1095 (22%), Positives = 473/1095 (43%), Gaps = 94/1095 (8%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ + + L L++PFI YR+ N +++ D F T
Sbjct: 365 SYDLTEFKECVGNAIKFLSQDNLEVPFIYAYRR------------NYISSKARDGFVLT- 411
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
LW I LD ++ + ++ ++ +YK+ L LN ++ D
Sbjct: 412 ----EDDLWDIVALDIEFHSIIYKRDYVKRFYKE--------------LKLNDEMVDDYF 453
Query: 173 KSLEAAETER--EVDDVD--LKFNLHFPPGEVGVDEGQY--KRPKRSTKYSSCSKAGLWE 226
++ A + D+ L+F EV ++ + K+ +++ Y + L++
Sbjct: 454 ENQTTASVAELNSLQDIYNYLEFKYAQEINEVSLEHSETNGKKHMKNSSYEKFKGSSLYK 513
Query: 227 VASKFGYSSEQLGLQL-SLEKMGDELEDPKETPEEMASNFKCA------MFNSS-QAVLQ 278
G ++EQ+G + S ++ ++ P + P E+ + A +F S+ + +
Sbjct: 514 AIDDIGITAEQVGENINSQHQIHAAVDHPTQKPREVVESILNANSKDLQVFTSNVKLAMD 573
Query: 279 GARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLR 338
+ A+E+S +R+ VRS F + T G I + +K+ +
Sbjct: 574 TVQKYYALELSKNIKIREKVRSDFYKYYLADVVLTSKGKREIQKGSLYEDIKYAINRTPI 633
Query: 339 KFEDAQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQ 394
F + ++ E E+L +T+KL S +N LF E + S+ A WN+
Sbjct: 634 HFRRDPDVFLRMLEAERLNLLTVKLHMSSQTQYVNHLFQLSLE---TTNTSELATEWNNF 690
Query: 395 RELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD 454
R+ A++ + + +E + + + + K+ P+ PD
Sbjct: 691 RKTSFIQAVEK-IFADISREIKDDLEKTCQKLVAKTVRHKFMTKLDQAPF-------IPD 742
Query: 455 --EEAAPRVLACCWGPG---KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKND 509
+ PR+L G G + V ++ G+ V N D+ + +N
Sbjct: 743 LKDPKIPRILTLTCGQGVFGQDAIMAVFVNRKGDFVKDFKI------VDNPFDKVNPQNF 796
Query: 510 QERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGD 569
++ L + + QP+ + + N + E+I K ++ + GH + I+Y D
Sbjct: 797 EDTLDNIIQNCQPNAIGINGPNPKTQKFYKKLQEVIHK--KQIVDNKGHN---IPIIYVD 851
Query: 570 ESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLE 629
+ + Y++S +S + P + +K +AL RY+Q+PL + L E+ S + +
Sbjct: 852 DEVAIRYQHSERASQEFPNKPPLIKYCIALARYMQSPLLEYSNLSL--EELRSLSIHQHQ 909
Query: 630 NFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVR 689
L D +E VD+ N VG+++N A + + L++ISG G RKA SL R
Sbjct: 910 LLLPIDILTRALETAFVDIVNLVGVEVNKATDNAYYASTLKYISGFGKRKAIDFLESLQR 969
Query: 690 AGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGL 747
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y L
Sbjct: 970 LNEPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHL 1029
Query: 748 AQELAKEV--YNRDIEGDLNDDEDALEMAIEHVRDRPDL---LKTYLLDRH---IKEKKR 799
A ++A + Y+ D + +D+ + IE +R+ PD L++ LD + +++K
Sbjct: 1030 ATKVAADALEYDPDTIAE-KEDQGTMSEFIELLREDPDRRTKLESLNLDSYAEELEQKTG 1088
Query: 800 ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQG 859
+ K L I EL+ GF++ RN + DE F ++GETE T +G ++ + R
Sbjct: 1089 QKKSNNLNTIVLELLDGFEELRNDFHPLQGDEIFQTLTGETEKTFFKGCIIPVRIERFWH 1148
Query: 860 QRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRES 919
IC S + ++ + + ++ G K+ I + E
Sbjct: 1149 NDIICTTNSEVECVVNAQRHLGVQLKRPANEIYEVGKTYPAKVIFIDYANISAEVSLLEH 1208
Query: 920 EMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEA 979
++++ + DP + + + +E+ + A+ R+I HP + +A
Sbjct: 1209 DIKHQYVPISYSKDPSIWDLKQELEDSEEEKKITMVEARAKRTHRVINHPYYFPFNGKQA 1268
Query: 980 MKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTL 1039
L +KE G+ +IR SSRG +L +T K+ ++ H DI E K++ + +G+ L
Sbjct: 1269 EDYLRSKERGDFVIRQSSRGDDHLVITWKLDKDLFQHVDIKELEKENP-----LALGRVL 1323
Query: 1040 KIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYG 1099
+ + DLD+++ Y+ + L + + KF++G+K EV + + P + VY
Sbjct: 1324 VVEGQKYHDLDQIIVEYLQNKIRLLNELTTNEKFKRGNKKEVIKFIEEYSEVNPNKSVYY 1383
Query: 1100 FGISHEHPGTFILTY 1114
F +++E+PG F L +
Sbjct: 1384 FSLNYENPGWFYLMF 1398
>gi|256272206|gb|EEU07199.1| Spt6p [Saccharomyces cerevisiae JAY291]
Length = 1430
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 244/1097 (22%), Positives = 469/1097 (42%), Gaps = 88/1097 (8%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ I + + + L++PFI YR+ N +++ D F
Sbjct: 343 NYDLTEFKEAIGNAIKFITKENLEVPFIYAYRR------------NYISSREKDGF---- 386
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
L LW I LD ++ L +K +Q +Y + + ++ + + + +
Sbjct: 387 -LLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDP---------IVTEYFKNQNT 436
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDE-GQY-KRPKRSTKYSSCSKAGLWEVASK 230
S+ + +++ D L+F E+ ++ G+ K+ +++ Y + L++ S
Sbjct: 437 ASIAELNSLQDIYDY-LEFKYANEINEMFINHTGKTGKKHLKNSSYEKFKASPLYQAVSD 495
Query: 231 FGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGARH 282
G S+E +G +S + ++ ++ P P E+ + A +F S ++ + +
Sbjct: 496 IGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNANSGDLQVFTSNTKLAIDTVQK 555
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
++E+S +R+ VRS F + T G I + +K+ + F
Sbjct: 556 YYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRR 615
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+ ++ E E L +++KL S + LF E + S A WN+ R+L
Sbjct: 616 DPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALE---TTNTSDIAIEWNNFRKLA 672
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
A+D + + +E + ++ + + K+ P+ D
Sbjct: 673 FNQAMDK-IFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRD-----PKI 726
Query: 459 PRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER--- 512
P++L G G+ V ++ G+ + R + D K + E+
Sbjct: 727 PKILTLTCGQGRFGADAIIAVYVNRKGDFI----------RDYKIVDNPFDKTNPEKFED 776
Query: 513 -LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
L + QP+ + + N + E++ K R GH + I+Y ++
Sbjct: 777 TLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSR--GHT---IPIIYVEDE 831
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+ Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P +N
Sbjct: 832 VAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTS--EEVRSLSIHPHQNL 889
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +SL R
Sbjct: 890 LSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLN 949
Query: 692 A-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQ 749
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA
Sbjct: 950 EPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLAT 1009
Query: 750 ELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKREN---K 802
++A + D + +E + IE +R+ PD L++ L+ + +E ++ K
Sbjct: 1010 KVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRK 1069
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
L I EL+ GF++ RN + DE F ++GE+E T +G ++ V R
Sbjct: 1070 LNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHNDI 1129
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR 922
IC S + ++ + ++ ++ G K+ I + + +++
Sbjct: 1130 ICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEVSLLDHDVK 1189
Query: 923 NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
+ DP + + + +E+ + A+ R+I HP + +A
Sbjct: 1190 QQYVPISYSKDPSIWDLKQELEDAEEERKLMMAEARAKRTHRVINHPYYFPFNGRQAEDY 1249
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L +KE GE +IR SSRG +L +T K+ ++ H DI E K++ + +GK L +
Sbjct: 1250 LRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENP-----LALGKVLIVD 1304
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+ DLD+++ Y+ V L M S KF+ G+K +V + + P + VY F +
Sbjct: 1305 NQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVKFIEDYSRVNPNKSVYYFSL 1364
Query: 1103 SHEHPGTFILTYIRSTN 1119
++++PG F L + + N
Sbjct: 1365 NYDNPGWFYLMFKINAN 1381
>gi|349578325|dbj|GAA23491.1| K7_Spt6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1451
Score = 234 bits (596), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 243/1097 (22%), Positives = 467/1097 (42%), Gaps = 88/1097 (8%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ I + + + L++PFI YR+ N +++ D F
Sbjct: 364 NYDLTEFKEAIGNAIKFITKENLEVPFIYAYRR------------NYISSREKDGF---- 407
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
L LW I LD ++ L +K +Q +Y + + ++ + + + +
Sbjct: 408 -LLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDP---------IVTEYFKNQNT 457
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEG--QYKRPKRSTKYSSCSKAGLWEVASK 230
S+ + +++ D L+F E+ ++ K+ +++ Y + L++ S
Sbjct: 458 ASIAELNSLQDIYDY-LEFKYANEINEMFINHTGKTGKKHLKNSSYEKFKASPLYQAVSD 516
Query: 231 FGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGARH 282
G S+E +G +S + ++ ++ P P E+ + A +F S ++ + +
Sbjct: 517 IGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNANSGDLQVFTSNTKLAIDTVQK 576
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
++E+S +R+ VRS F + T G I + +K+ + F
Sbjct: 577 YYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRR 636
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+ ++ E E L +++KL S + LF E + S A WN+ R+L
Sbjct: 637 DPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALE---TTNTSDIAIEWNNFRKLA 693
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
A+D + + +E + ++ + + K+ P+ D
Sbjct: 694 FNQAMDK-IFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRD-----PKI 747
Query: 459 PRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER--- 512
P++L G G+ V ++ G+ + R + D K + E+
Sbjct: 748 PKILTLTCGQGRFGADAIIAVYVNRKGDFI----------RDYKIVDNPFDKTNPEKFED 797
Query: 513 -LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
L + QP+ + + N + E++ K R GH + I+Y ++
Sbjct: 798 TLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSR--GHT---IPIIYVEDE 852
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+ Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P +N
Sbjct: 853 VAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTS--EEVRSLSIHPHQNL 910
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +SL R
Sbjct: 911 LSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLN 970
Query: 692 A-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQ 749
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA
Sbjct: 971 EPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLAT 1030
Query: 750 ELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKREN---K 802
++A + D + +E + IE +R+ PD L++ L+ + +E ++ K
Sbjct: 1031 KVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRK 1090
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
L I EL+ GF++ RN + DE F ++GE+E T +G ++ V R
Sbjct: 1091 LNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHNDI 1150
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR 922
IC S + ++ + ++ ++ G K+ I + + +++
Sbjct: 1151 ICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEVSLLDHDVK 1210
Query: 923 NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
+ DP + + + +E+ + A+ R+I HP + +A
Sbjct: 1211 QQYVPISYSKDPSIWDLKQELEDAEEERKLMMAEARAKRTHRVINHPYYFPFNGRQAEDY 1270
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L +KE GE +IR SSRG +L +T K+ ++ H DI E K++ + +GK L +
Sbjct: 1271 LRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENP-----LALGKVLIVD 1325
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+ DLD+++ Y+ V L M S KF+ G+K +V + + P + VY F +
Sbjct: 1326 NQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVKFIEDYSRVNPNKSVYYFSL 1385
Query: 1103 SHEHPGTFILTYIRSTN 1119
++++PG F L + + N
Sbjct: 1386 NYDNPGWFYLMFKINAN 1402
>gi|151943395|gb|EDN61706.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae YJM789]
Length = 1451
Score = 234 bits (596), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 243/1097 (22%), Positives = 467/1097 (42%), Gaps = 88/1097 (8%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ I + + + L++PFI YR+ N +++ D F
Sbjct: 364 NYDLTEFKEAIGNAIKFITKENLEVPFIYAYRR------------NYISSREKDGF---- 407
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
L LW I LD ++ L +K +Q +Y + + ++ + + + +
Sbjct: 408 -LLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDP---------IVTEYFKNQNT 457
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEG--QYKRPKRSTKYSSCSKAGLWEVASK 230
S+ + +++ D L+F E+ ++ K+ +++ Y + L++ S
Sbjct: 458 ASIAELNSLQDIYDY-LEFKYANEINEMFINHTGKTGKKHLKNSSYEKFKASPLYQAVSD 516
Query: 231 FGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGARH 282
G S+E +G +S + ++ ++ P P E+ + A +F S ++ + +
Sbjct: 517 IGISAEDVGENISSQHQIHPPVDHPSSKPVEVLESILNANSGDLQVFTSNTKLAIDTVQK 576
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
++E+S +R+ VRS F + T G I + +K+ + F
Sbjct: 577 YYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRR 636
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+ ++ E E L +++KL S + LF E + S A WN+ R+L
Sbjct: 637 DPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALE---TTNTSDIAIEWNNFRKLA 693
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
A+D + + +E + ++ + + K+ P+ D
Sbjct: 694 FNQAMDK-IFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRD-----PKI 747
Query: 459 PRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER--- 512
P++L G G+ V ++ G+ + R + D K + E+
Sbjct: 748 PKILTLTCGQGRFGADAIIAVYVNRKGDFI----------RDYKIVDNPFDKTNPEKFED 797
Query: 513 -LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
L + QP+ + + N + E++ K R GH + I+Y ++
Sbjct: 798 TLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSR--GHT---IPIIYVEDE 852
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+ Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P +N
Sbjct: 853 VAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTS--EEVRSLSIHPHQNL 910
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +SL R
Sbjct: 911 LSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLN 970
Query: 692 A-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQ 749
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA
Sbjct: 971 EPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLAT 1030
Query: 750 ELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKREN---K 802
++A + D + +E + IE +R+ PD L++ L+ + +E ++ K
Sbjct: 1031 KVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRK 1090
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
L I EL+ GF++ RN + DE F ++GE+E T +G ++ V R
Sbjct: 1091 LNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHNDI 1150
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR 922
IC S + ++ + ++ ++ G K+ I + + +++
Sbjct: 1151 ICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEVSLLDHDVK 1210
Query: 923 NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
+ DP + + + +E+ + A+ R+I HP + +A
Sbjct: 1211 QQYVPISYSKDPSIWDLKQELEDAEEERKLMMAEARAKRTHRVINHPYYFPFNGRQAEDY 1270
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L +KE GE +IR SSRG +L +T K+ ++ H DI E K++ + +GK L +
Sbjct: 1271 LRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENP-----LALGKVLIVD 1325
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+ DLD+++ Y+ V L M S KF+ G+K +V + + P + VY F +
Sbjct: 1326 NQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVKFIEDYSRVNPNKSVYYFSL 1385
Query: 1103 SHEHPGTFILTYIRSTN 1119
++++PG F L + + N
Sbjct: 1386 NYDNPGWFYLMFKINAN 1402
>gi|190406867|gb|EDV10134.1| transcription initiation protein SPT6 [Saccharomyces cerevisiae
RM11-1a]
Length = 1451
Score = 234 bits (596), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 243/1097 (22%), Positives = 467/1097 (42%), Gaps = 88/1097 (8%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ I + + + L++PFI YR+ N +++ D F
Sbjct: 364 NYDLTEFKEAIGNAIKFITKENLEVPFIYAYRR------------NYISSREKDGF---- 407
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
L LW I LD ++ L +K +Q +Y + + ++ + + + +
Sbjct: 408 -LLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDP---------IVTEYFKNQNT 457
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEG--QYKRPKRSTKYSSCSKAGLWEVASK 230
S+ + +++ D L+F E+ ++ K+ +++ Y + L++ S
Sbjct: 458 ASIAELNSLQDIYDY-LEFKYANEINEMFINHTGKTGKKHLKNSSYGKFKASPLYQAVSD 516
Query: 231 FGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGARH 282
G S+E +G +S + ++ ++ P P E+ + A +F S ++ + +
Sbjct: 517 IGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNANSGDLQVFTSNTKLAIDTVQK 576
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
++E+S +R+ VRS F + T G I + +K+ + F
Sbjct: 577 YYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRR 636
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+ ++ E E L +++KL S + LF E + S A WN+ R+L
Sbjct: 637 DPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALE---TTNTSDIAIEWNNFRKLA 693
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
A+D + + +E + ++ + + K+ P+ D
Sbjct: 694 FNQAMDK-IFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRD-----PKI 747
Query: 459 PRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER--- 512
P++L G G+ V ++ G+ + R + D K + E+
Sbjct: 748 PKILTLTCGQGRFGADAIIAVYVNRKGDFI----------RDYKIVDNPFDKTNPEKFED 797
Query: 513 -LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
L + QP+ + + N + E++ K R GH + I+Y ++
Sbjct: 798 TLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSR--GHT---IPIIYVEDE 852
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+ Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P +N
Sbjct: 853 VAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTS--EEVRSLSIHPHQNL 910
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +SL R
Sbjct: 911 LSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLN 970
Query: 692 A-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQ 749
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA
Sbjct: 971 EPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLAT 1030
Query: 750 ELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKREN---K 802
++A + D + +E + IE +R+ PD L++ L+ + +E ++ K
Sbjct: 1031 KVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRK 1090
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
L I EL+ GF++ RN + DE F ++GE+E T +G ++ V R
Sbjct: 1091 LNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHNDI 1150
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR 922
IC S + ++ + ++ ++ G K+ I + + +++
Sbjct: 1151 ICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEVSLLDHDVK 1210
Query: 923 NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
+ DP + + + +E+ + A+ R+I HP + +A
Sbjct: 1211 QQYVPISYSKDPSIWDLKQELEDAEEERKLMMAEARAKRTHRVINHPYYFPFNGRQAEDY 1270
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L +KE GE +IR SSRG +L +T K+ ++ H DI E K++ + +GK L +
Sbjct: 1271 LRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENP-----LALGKVLIVD 1325
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+ DLD+++ Y+ V L M S KF+ G+K +V + + P + VY F +
Sbjct: 1326 NQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVKFIEDYSRVNPNKSVYYFSL 1385
Query: 1103 SHEHPGTFILTYIRSTN 1119
++++PG F L + + N
Sbjct: 1386 NYDNPGWFYLMFKINAN 1402
>gi|254579891|ref|XP_002495931.1| ZYRO0C06446p [Zygosaccharomyces rouxii]
gi|238938822|emb|CAR26998.1| ZYRO0C06446p [Zygosaccharomyces rouxii]
Length = 1454
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 248/1096 (22%), Positives = 477/1096 (43%), Gaps = 99/1096 (9%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ R+ + + + + L++PFI YR+ N +++ + D F T
Sbjct: 370 NYDLTEFRECVGNAIQFIVQENLEVPFIYAYRR------------NYISSRDADGFVLT- 416
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
LW I LD ++ + ++ ++ +Y++ E+S + DE NQ +
Sbjct: 417 ----EDDLWDIVQLDIEFHSIINKRDYVKRFYEELNVEDS--VVDE--YFQNQ----TTG 464
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
S E + + ++ K+ G + + K+ +++ Y + L++ + G
Sbjct: 465 SSAELNSLQDIYNYLEFKYAHEINDGLL---KKTGKKHLKNSSYEKFKASSLYQAITDVG 521
Query: 233 YSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQ-----------GA 280
++EQ+G ++ + ++ ++ P TP+E+ ++ NS+ A LQ
Sbjct: 522 ITAEQIGENVNAQHQIHVAVDHPNMTPQEVVE----SILNSNTADLQVFTSNTKLALDTV 577
Query: 281 RHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW-LREKPLRK 339
+ A+EIS +R+ VRS F + T G I + +K+ + P+
Sbjct: 578 KKYYALEISKNTKMREKVRSDFYKYYLADVVLTSKGKREIQRGSIYEDIKYAINRTPMHF 637
Query: 340 FEDAQ-WLLIQKAEEEKLLQVTIKLPEDS--LNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
D +L + +AE LL V + + + + +F E + S+ A WN+ R+
Sbjct: 638 QRDPDVFLRMLEAESFNLLGVKLHMTSQAHYVEHMFQVVLE---TTNTSQLATEWNNFRK 694
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
A+D + + E + +S + + L K+ PY P +
Sbjct: 695 SAFVQAMDQ-IFADISGEIKDDLSKTCEKLVTKTIRHKLMTKLDQAPYIP-----NPKDP 748
Query: 457 AAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER---- 512
P+VL G G+ + D + + +S VRD + N +R
Sbjct: 749 KIPKVLTLTAGQGRFGS------------DAIIAVFVNRKSDFVRDFKIVDNPFDRNNPQ 796
Query: 513 -----LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
L + + QP+V+ + N L + E++ K ++ + GH + +VY
Sbjct: 797 KFEDTLDTIIQNCQPNVIGINGPNPKTQKLYKRLQEVVHK--KQIIDNRGHT---IPVVY 851
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
++ + Y++S + + P + VK +AL RYL +PL A L E+ S + P
Sbjct: 852 VEDEVAIRYQSSERGNQEFPNKPPLVKYCIALARYLHSPLLEYANLTL--EELGSLAIHP 909
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
++ + D ++E VD+ N VG+++N A + + LQ+ISG G RKA SL
Sbjct: 910 TQSLVPRDSLLRVLETAFVDIVNLVGVEVNKATDNPYYASALQYISGFGKRKAIDFLESL 969
Query: 688 VRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESY 745
R + R+ +T + L K +F+N+ GFL + + + D LD+TRIHPE Y
Sbjct: 970 HRLNEPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDNTRIHPEDY 1029
Query: 746 GLAQELAKEVYNRDIEGDLNDD-EDALEMAIEHVR---DRPDLLKTYLLDRHIKEKKR-- 799
LA ++A + D + + + + I+ +R DR L++ L+++ ++ ++
Sbjct: 1030 HLATKVAADALESDPDAIAEKEGQGTMSEFIDILREDTDRRSKLESLNLEQYAEDLEKNT 1089
Query: 800 -ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
+ K L I EL+ GF++ RN + +E F ++GETE + +G +V V R +
Sbjct: 1090 GQRKLNNLNTIVLELLDGFEELRNDFHPLHGEEIFQSLTGETEKSFFKGCIVPVRVERFR 1149
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
+C+ S + ++ + ++ D G K+ I + E
Sbjct: 1150 HNDIMCITNSQVECVVNAQHHAGTQFKRPPGDIYEIGKTYPAKVVFIDYENILAEVSLLE 1209
Query: 919 SEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADE 978
++R+ + DP + + + + + + + A+ R+I HP + +
Sbjct: 1210 HDIRHQYVPINFSKDPSIWDLKQELEDSEVEKKITMQEARAKRTHRVINHPYYFPFNGKQ 1269
Query: 979 AMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKT 1038
A L +KE G+ +IR SSRG +L +T K+ ++ H D+ E K++ + +G+
Sbjct: 1270 AEDYLRSKERGDFVIRQSSRGDDHLVITWKLDKDLFQHIDVQELEKENP-----LALGRV 1324
Query: 1039 LKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVY 1098
L + + + DLD+++ Y+ + L + S KF+ G+ +V + + P R VY
Sbjct: 1325 LVVEQQRYHDLDQIIVEYLQNKIRLLNEITSNEKFKSGNMKDVVKFVEDYSKVNPNRSVY 1384
Query: 1099 GFGISHEHPGTFILTY 1114
F +H HPG F L +
Sbjct: 1385 HFCFNHNHPGWFYLMF 1400
>gi|156848418|ref|XP_001647091.1| hypothetical protein Kpol_1050p93 [Vanderwaltozyma polyspora DSM
70294]
gi|156117774|gb|EDO19233.1| hypothetical protein Kpol_1050p93 [Vanderwaltozyma polyspora DSM
70294]
Length = 1454
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 256/1103 (23%), Positives = 480/1103 (43%), Gaps = 110/1103 (9%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ +D I + + L++PFI YR+ N +++ + D F T
Sbjct: 366 NYDLTEFKDAIGNAIRFISEDNLEVPFIFAYRR------------NYISSKSKDGFVLT- 412
Query: 113 TLKWHKVLWAIHDLDKKW-LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSI 171
LW I +L+ ++ ++ KR +Y KK Y+E D T +N+ +
Sbjct: 413 ----EDDLWEIVNLNIEFHSIIHKR-----NYVKKFYDE-----LDITDSIVNEYFSNQH 458
Query: 172 SKSLEAAETEREVDD-VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ + + +++ D ++ K+ E K+ +++ Y + L+E +
Sbjct: 459 TATTAELNSLQDIYDYLEFKYAKEINELLSKSTENSGKKHLKNSSYEKFKSSPLYEAVAG 518
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKET----PEEMASNFK------CAMFNSSQAV-LQG 279
G ++EQ+G +S + ++ PK+ P E+ + +F+S+ + +
Sbjct: 519 MGITAEQIGENISSQH---QINIPKDNETLKPIELIKSILDKNGTGLQIFSSNNKLAVDT 575
Query: 280 ARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW-LREKPLR 338
+ ++EIS VR+ VRS F + T G I + +K+ + P+
Sbjct: 576 IQKYYSMEISKNTKVREKVRSDFYKYYLADVVLTTKGRREIQRGSIYEDIKYAINRTPMH 635
Query: 339 KFEDAQWLL-IQKAEEEKLLQVTIKLPEDS--LNKLFSDCKEHYLSDGVSKSAQLWNDQR 395
+D L + +AE LL V + + S ++ LF E + S+ A WND R
Sbjct: 636 FRKDPDLFLRMLEAESLNLLNVKLHMSSHSQYIDHLFQIAAE---TTDTSELATAWNDFR 692
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD- 454
+ + ALD +L S+ +E + +S + + K+ P+ P+
Sbjct: 693 KAAFRQALDQ-ILSSISREIKDDLSKSCQKLVARSIRHKFMTKLDQAPF-------IPNA 744
Query: 455 -EEAAPRVLACCWGPGKPETTFVM---LDSSGEVV-DVLFTGCLTLRSQNVRDQQSKKND 509
E PRVL G G+ + ++ ++ GE V D +N D+ + +
Sbjct: 745 KEPKIPRVLTITCGEGRFGSDAIIATYINRKGEFVRDFKIV-------ENPFDRSNPQKF 797
Query: 510 QERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV----GHEMDELSI 565
+E + + Q +VV + N + EI+ H + + GH + I
Sbjct: 798 EEVFDDIIQNCQINVVGINGPNPRTQRFYKRLQEIV------HSKQIVDSRGHT---IPI 848
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
+Y ++ + Y+NS +S + P + VK + L RY+ +PL + L E+ S +
Sbjct: 849 IYVEDEVAIRYQNSERASQEFPNKPSLVKYCIGLARYIHSPLLEYSNLTT--EELTSLSI 906
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
++ + + +E VD+ N VG+++N A + + L++ISG G RKA
Sbjct: 907 HSNQSLIPRELLLKTLESAFVDIVNLVGVEVNKATDNGYYASALRYISGFGKRKAIDFLE 966
Query: 686 SLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPE 743
SL R + R+ +T + L K +F+NA GFL + + + D LD TRIHPE
Sbjct: 967 SLQRLNEPLLARQQLITHNILHKTIFMNAAGFLYISWNEKRQRYEDLEHDQLDSTRIHPE 1026
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDEDALEMA--IEHVRDRPDL--------LKTYL--LD 791
Y LA ++A + D + + + E M+ IE +R+ PD L++Y L+
Sbjct: 1027 DYHLATKVAADALEYDPDA-IAEKESQGTMSEFIEILREDPDKRQKLESLNLESYAEELE 1085
Query: 792 RHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQ 851
+ I +KK N L+ I EL+ GF++ RN + DE F ++GETE + +G ++
Sbjct: 1086 KKIGQKKLNN----LHTIVLELLDGFEELRNDFHPLHGDEIFQTLTGETEKSFFKGCILP 1141
Query: 852 ATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQ 911
V R + IC+ S + ++ + + + G K+ I
Sbjct: 1142 VRVERFRHNDIICITNSQVECIVNAQRHLGAQYRQPAGELYEIGRTYPAKVIFIDHENIT 1201
Query: 912 VFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCF 971
+ ++ ++ + + DP + + + ++E+ + A+ R+I HP +
Sbjct: 1202 AEVSLLPNDTKHQYVPYSYSRDPNIWDLKQELEDQEEEKKITMTEARAKRTHRVINHPYY 1261
Query: 972 QNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKS 1031
+A L +KE G+ ++R SSRG +L +T K+ ++ H DI E K++
Sbjct: 1262 FPFNGKQAEDYLRSKERGDFVVRQSSRGDDHLAITWKLDKDLFQHIDIQELEKENP---- 1317
Query: 1032 LVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAE 1091
+ +G+ L + + DLD+++ Y+ + L + S KF+ G + +V + +
Sbjct: 1318 -LALGRILVVEGQRYHDLDQIIVEYLQNKIRLLNEITSNEKFKTGGRKDVIKFIEDYSKV 1376
Query: 1092 FPTRIVYGFGISHEHPGTFILTY 1114
P R VY F ++E+PG F L +
Sbjct: 1377 NPNRSVYYFSFNYENPGWFYLMF 1399
>gi|321462526|gb|EFX73548.1| hypothetical protein DAPPUDRAFT_57929 [Daphnia pulex]
Length = 825
Score = 233 bits (594), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 298/600 (49%), Gaps = 40/600 (6%)
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW 331
S+ ++GA M A +I+ EP VRK+VR F + A PT +G I+ H +K+
Sbjct: 37 STATEVKGANDMLAEQIAKEPSVRKFVRESFFERARFDVIPTKEGLKKINEMHDLYSLKF 96
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP---EDSLNKLFSD--CKEHYLSDGVSK 386
L++KP R D Q+L + AE++KLL TI P E ++ + D K D SK
Sbjct: 97 LKDKPARDLVDDQFLRLWVAEQDKLL--TIVFPTKIEGAITASYVDEIIKALLTRDESSK 154
Query: 387 SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR 446
Q WN QR I+ AL F+LPS+VKE ++ + A ++ + L+N ++V PY+
Sbjct: 155 LVQEWNVQRNEIIDLALSKFVLPSLVKELKAKLLNEAHEFVKRACCQQLYNCLNVAPYEV 214
Query: 447 KDNDITP-DEEAAPRVLACCWGPGKPETTF-VMLDSSGEVVD-VLFTGCLTLRSQNVRDQ 503
D D + RVL + G+ ET + +++ GE + + L ++ +D+
Sbjct: 215 NFGDKEDWDTKDGFRVLGLSY--GEDETVYGCLINVDGEFSNQIRLEHILKRKNAGEKDR 272
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDEL 563
K+ + + L F+ PH + + A + T L +D II + V+E ++ +
Sbjct: 273 TDKEKNLKMLKYFISSGMPHAIAVSAESKKATKLVEDSRAIISEFVKE------NKCPTI 326
Query: 564 SIVYGDESLPRLYENSR---ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
++ D SL +++ S D L G+ A+ + R Q+PL + LC +I
Sbjct: 327 NVFLVDNSLAKVFAKSTRADFPQDWLFGE------AITIARVFQDPLIAYSQLCNADDDI 380
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
L K PL+ L+ ++ + V+ N+ G+DIN AI LQFI GLGPRKA
Sbjct: 381 LLLKYHPLQEKLSKEQLLEGLYLEFVNRINESGVDINRAIKYPRTAHLLQFICGLGPRKA 440
Query: 681 ASLQRSL-VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRV--RRSGQAASSSQFIDLLDD 737
L ++L + + R TA +G VF N GF+++ SG AA S +++LD
Sbjct: 441 DDLIKTLKLNNKRLENRSQLKTACHMGVNVFTNCAGFIKIDTHLSGDAAESQ--VEVLDG 498
Query: 738 TRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEK 797
+R+HPE Y A+ A E D++ A++ + + P+ L +D +
Sbjct: 499 SRVHPEIYDWARRFAVAALEYHGEKDVDP-----WGAVKKILEAPERLIGLDVDALAADL 553
Query: 798 KRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV 854
+R+ NKR TLY IR EL H ++D R+ Y+ PS ++ F +++ ET T G++V ATV
Sbjct: 554 ERQGFGNKRNTLYDIRSELNHLYKDGRSSYRPPSDEDIFNIVTKETSQTFFIGKMVLATV 613
>gi|302306327|ref|NP_982572.2| AAR031Wp [Ashbya gossypii ATCC 10895]
gi|442570043|sp|Q75EP8.2|SPT6_ASHGO RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Chromatin elongation factor SPT6
gi|299788464|gb|AAS50396.2| AAR031Wp [Ashbya gossypii ATCC 10895]
gi|374105771|gb|AEY94682.1| FAAR031Wp [Ashbya gossypii FDAG1]
Length = 1432
Score = 232 bits (592), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 231/931 (24%), Positives = 399/931 (42%), Gaps = 51/931 (5%)
Query: 208 KRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFK 266
K+ +++ Y + L++ G ++EQ+G + E ++ ++ P P E S
Sbjct: 469 KKHLKNSSYEKFKSSSLYQAVKDVGITAEQIGENIGAETQIHPVVDHPNLKPSESISQIL 528
Query: 267 CAMFNSSQAVLQG-------ARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSA 319
A Q + + A EI P VR+ +R+ F +V T G
Sbjct: 529 DAASADLQVFAKNHKLAWDTVQKYFAAEIGNNPKVRQKIRNDFYKYYIVDVVLTTKGRKE 588
Query: 320 IDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL----PEDSLNKLFSDC 375
I + +K+ + F A + ++ E E L + IK+ E LF
Sbjct: 589 IQRSSPYEDIKYAINRTPGHFRSAPDVFLRMLEAESLHLMNIKIHMSSQEQYCEHLFQIA 648
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
E + S+ A WN+ R AL+ + + +E + + ++ +
Sbjct: 649 LE---TTNTSEIAIEWNNFRRNAFYQALEK-IFEDIAQEIKDELKKTSQKLVANSVRHRF 704
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGC 492
+K+ P+ P E PRVL G G+ V+L+ G+ V
Sbjct: 705 MSKLDQAPFIP-----NPREPKIPRVLTITCGQGRFGLDAIIAVLLNRKGDFVKDFKI-- 757
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
QN D+ + + L + + QP+V+ + N L I E+I K ++
Sbjct: 758 ----VQNPFDRDQPQAFEAVLDNIIQEAQPNVIGINGPNPKTQKLFKKIQEVIQK--KQI 811
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
+ GH + +++ ++ + Y++S + + P + VK +AL RY+ +PL
Sbjct: 812 VDNRGHN---IPVIFVEDEIAIRYQSSERGAQEFPNKPTLVKYCIALARYIHSPLLEYTN 868
Query: 613 LCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFI 672
L E+ S + P ++ L +E VD+ N VG+++N A + LQ+I
Sbjct: 869 LSE--EELQSLLIHPHQSLLPRHIFKRALETSFVDIVNLVGVEVNKANDNPYYAKALQYI 926
Query: 673 SGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+GLG RKA SL R + R+ +T L K +F+N+ GFL + + +
Sbjct: 927 AGLGKRKAIDFLESLQRLNEPLLARQQLITHDILHKTIFMNSAGFLYISWNEKNQRYEDL 986
Query: 732 -IDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LK 786
D LD TRIHPE Y LA ++A + D + +E A+ IE +RD PD L+
Sbjct: 987 EHDHLDSTRIHPEDYHLATKVAADALEYDPDAIREKEEQGAMSEFIELLRDDPDRRMKLE 1046
Query: 787 TYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT 843
+ L+ + E +R + K L I EL+ GF++ RN + DE F ++GET+ T
Sbjct: 1047 SLNLEEYADELERSTGQRKLNNLNTIVLELLEGFEELRNDFHPLQGDEIFTSLTGETDKT 1106
Query: 844 LAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIK 903
+G ++ V R + IC+ S + ++ + + SD G KI
Sbjct: 1107 FFKGSIIPVRVERFKHNDIICISNSQVECIVNAQRHLGVQLKRPASDIYEVGKTYPAKII 1166
Query: 904 SIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKE 963
I + + ++++ + DP + + +E+ + A+
Sbjct: 1167 FIDYENISAEVSLLDHDVKHQYIPVDYSKDPTIWNLKQELEDVEEEKKISMAEARAKRTH 1226
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
R+I HP + +A L +KE GE IIR SSRG +L +T K+ ++ H DI+E
Sbjct: 1227 RVINHPYYFPFNGKQAEDYLRSKERGEFIIRQSSRGDDHLAITWKLDKDLFQHVDILELD 1286
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
K++ + +GKTL + + + DLD V+ Y+ + L + S KF+KG+K EV +
Sbjct: 1287 KENP-----LALGKTLIVDNNKYNDLDHVIVEYLQNKIKLLNEITSNEKFKKGTKKEVVK 1341
Query: 1084 LLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
+ P R VY ++EHPG F L +
Sbjct: 1342 FIEDYSNVNPNRSVYYLSFNYEHPGWFYLMF 1372
>gi|321457526|gb|EFX68611.1| hypothetical protein DAPPUDRAFT_10253 [Daphnia pulex]
Length = 945
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 244/982 (24%), Positives = 419/982 (42%), Gaps = 103/982 (10%)
Query: 26 ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRK 85
E+ WIY S + + P+ + I + L+L+ Q ++P+IA K
Sbjct: 35 EAQWIYKNAFSKSSVSNQEMVIKGPQ-------TVKKIRKALELIRNQHFEVPYIAKNLK 87
Query: 86 EECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHD-------------------- 125
E L + N + + D E T K++ + D
Sbjct: 88 E---YFLPEFSANNLLTVSKFDEEWTLLESLKKIMMFLFDEIPKYQSEIKDELMNWINSY 144
Query: 126 ---LDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
D +L + S KKR E R+ E R + ++ F+ +S++ E+
Sbjct: 145 EQLSDIYYLFTLHHGNEAPSIQKKRQRE--RKEAQEWRSSAARRRFNEDGESMDGDESSE 202
Query: 183 EVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQL 242
++ D P +V VD YS C +AGL E ++G + +QL
Sbjct: 203 DLRD----------PDDVNVD-----------FYSICVRAGLAEPLKEYGLTPKQLTENT 241
Query: 243 SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF 302
E+ P +A + F ++ VL+ +M AV+I+ EP R++VR F
Sbjct: 242 LDNYRRHEVLQTSTEPFGVAVKYVSPEFPTATEVLEATNYMLAVQIAREPLFRQFVRESF 301
Query: 303 MDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK 362
+ A + PT G ID H +K+L++KP+R + Q+L + AE LL + +
Sbjct: 302 FERARIDVIPTKKGFMEIDENHPLYSLKFLKDKPVRDLVEDQFLQLSVAERNGLLTIVYQ 361
Query: 363 LP-EDSLNKLFSD-CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMS 420
E + + D K + D S Q WND R+ I+ L FL P + K+ + +
Sbjct: 362 TEIEGATTASYVDEIKALFTRDESSNLVQKWNDLRKEIIDLVLSKFLFPLLEKKLKEKLL 421
Query: 421 GRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDS 480
AK ++L + L+N + V PY + D D D + R++ + + E + +D
Sbjct: 422 NEAKGFVLRACCQQLYNWLKVAPY-KVDFDDEKDTKDGYRIMGLSFNLDEAEICVINVD- 479
Query: 481 SGEVVD-VLFTGCLTLR-SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
GE D + L R + D ++ D L F+ +PHV+ + A + T L
Sbjct: 480 -GECSDHIRLEHILKRRIAWKETDHTGREKDLNTLKDFIFRKKPHVIAVSAESREATMLV 538
Query: 539 DDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVA 598
+D+ I ++VE+ P +++ D SL +++ S ++ + P ++ A++
Sbjct: 539 EDLRAKIAQLVEDKP-----SWQTINVELVDNSLAKVFAKSTLAESEFPEFSLLLREAIS 593
Query: 599 LGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINL 658
+ R LQ+PL+ A L +EIL + P++ L+ +E + Q V+ TN+VG+DIN
Sbjct: 594 ISRQLQDPLSEYAQLFNANKEILKLEFHPMQGELSEEELMQGLNQEFVNRTNEVGVDINR 653
Query: 659 AIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF-TRKDFVTAHGLGKKVFVNAVGFL 717
AI LQFI GLGPRK +L ++L ++ I R FVTA +G KV N VGF+
Sbjct: 654 AIKYPRTAHLLQFICGLGPRKGKALIQTLKQSNQILENRTQFVTACHMGPKVLANCVGFI 713
Query: 718 RVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEH 777
+ + ++ +++LD +R+HP+ Q L+ ED M ++
Sbjct: 714 KFNSNALGDTTESHVEVLDGSRVHPDGRLPYQRLS--------------SEDVFFMVMKE 759
Query: 778 VRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMIS 837
R + + I ++R+ +RE L W+ + + + +S
Sbjct: 760 T-PRSFFIGKLVSATVISFQRRKPEREELDRANPNRNETTGLWQCPFCRKNNFTDATKVS 818
Query: 838 GETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML-MKEDYSDDWRDSELSDKLHEGD 896
D G+ +R LE+GL+G L MK Y D + + G
Sbjct: 819 IHFYDGSCSGQANGVNIR----------LENGLSGYLPMK--YLSDSEVKHPEEHVRLGK 866
Query: 897 ILTCKIKSIQKNRYQVFLVCRESE-MRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKE 955
+ C+I +I R+ V + R S+ M NR + D YY + + EK KEKE
Sbjct: 867 KIQCRITNIDVKRFSVDVTSRPSDLMDRNRVEK----DAYYDKPAEEAMLKAEKDSKEKE 922
Query: 956 LA-KKHFKERLIVHPCFQNVTA 976
+ +++ +R+ VH ++V
Sbjct: 923 IKNRQNNTKRVTVHQSSESVAT 944
>gi|313211848|emb|CBY15997.1| unnamed protein product [Oikopleura dioica]
Length = 1662
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 200/792 (25%), Positives = 372/792 (46%), Gaps = 78/792 (9%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETR---LALNQQLFDSISKSLE 176
L I D+ ++ ++K+ L ++ + YDE++ + + L + +E
Sbjct: 184 LHRILRYDEHYMKFSQKKAKLHKLFQNMLNFQ----YDESQSEDFKIYRSLEPAYVSKVE 239
Query: 177 AAETEREVDDVDLKFNLHFPPGEVGV--------------DEGQYKRPKRSTKYSSCSKA 222
T+ E+DD F LHF + D K+ +R++ Y+ C K
Sbjct: 240 ECNTQNELDDYFQFFQLHFGRDVQKMNQKNRNEDEDYNAGDTKNMKQAQRNSNYNLCMKN 299
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
L EVA KFG + E+ + + E+ E PEE AS + A F+++ VL+GAR
Sbjct: 300 KLGEVAKKFGLTPEEFADHVKCDFQNHEVNQCDEEPEEFASMYCTAQFDTADKVLRGARF 359
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
+AA +++ EP VRK VR F + A +ST T G+ AID H ++L KP++K
Sbjct: 360 VAAQQMAVEPEVRKAVRRSFFEKACISTTLTKKGERAIDEDHPLHRFRFLSNKPIKKLTG 419
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS-------------LNKLFSDCKEHYLSDGVSKSAQ 389
A+++ ++ ++KL+++ I L + + L+ + D + Y D
Sbjct: 420 AEFIHLKNGGDDKLIELEIGLEKRASSRFTDPDGNGMILDDIEEDLFDLYNKDLNDDLTV 479
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP-YQRKD 448
WN QR++++++ L+N L P+ +++ + + A+ + + + S GP
Sbjct: 480 KWNTQRQMLIQEMLNNILYPAFIQKLKLKLIEEAEEGIYEFARRKFRSIASAGPCIPLNK 539
Query: 449 NDITPDEEAAPRVLACCWGPGKPET-TF-VMLDSSGEV-VDVLFTGCLT-LRSQNVRDQQ 504
+ D+ +L C + E TF VML GE+ + F + +N Q
Sbjct: 540 DLDNDDDYDQENLLLCLHASDRIEVPTFGVMLKEDGEIHMYRKFNRIMAPAMRENHPHHQ 599
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE-HPRDVGHEMDEL 563
S K D ++L + + ++P+ ++L A ++ +L ++ ++ EE H + G+++
Sbjct: 600 SMKRDIDQLKQILSRYRPYAIILAATSMKSRNL----MSLVRRVTEELHMEEDGYQIP-- 653
Query: 564 SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSW 623
+ + D + R+Y ++ + + P ++ A++LGRY +P ++ L P +IL
Sbjct: 654 LVEFRDPMVSRVYSVAKFAQETFPDYPEELRLAISLGRYALDPAIEISQLFNPDDDILCL 713
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
L P ++Y + ++ D ++Q N F LQF+ GLG RKA +
Sbjct: 714 NLSP--------DQYLLKDRRTKDPSSQSAARRNAKSG----FQLLQFLPGLGRRKADAF 761
Query: 684 QRSLVRAGAIFTRKDFV------TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
+ R + + +G VFVN VGF+R+ S + + +++D+ D
Sbjct: 762 LKDYRRQNIRIEHRQKILGVNDDQVRSIGPTVFVNCVGFIRLNTS-ELGDAEEYVDVFDS 820
Query: 738 TRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM--AIEHVRDRPDLLKTYLLDRH-- 793
TRIHPES+ +++ K++ + +E D+++DE E A+ V +P+ L+ L+
Sbjct: 821 TRIHPESFEYGRKMCKDLACQ-VEVDMDEDEYENEEYRAVNKVMGKPEYLQGLDLEAFNA 879
Query: 794 --IKEKKRE------NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
I E NK TLY +++E+ F+D R ++ DE FY+++GET +T+
Sbjct: 880 DLITLNHNEGNYTIVNKICTLYQLKKEIGTPFKDNRKPPRQIHSDELFYLLTGETPETIF 939
Query: 846 EGRVVQATVRRV 857
++V TV+R
Sbjct: 940 LQKMVTGTVQRF 951
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 158/299 (52%), Gaps = 13/299 (4%)
Query: 862 AICV-LESGLAGMLMKEDYS--DDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
A+ V L++GL+ ++ + S DD + + ++ ++ +IK+I ++Q+ L +
Sbjct: 1017 AVSVKLDNGLSALVDRNSISSQDDGYVDDPTTRMKLDQVVRGRIKNINFEKFQMRLTTKS 1076
Query: 919 SEMRNNRY-QHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTAD 977
++++ + D + +++ + Q +++K+K + + +R+I H F N++
Sbjct: 1077 TDLQTTSLGPTSKEQDRHLDKDKMAMVMAQFQSKKKKAENQSQYTKRVIAHDSFMNISYG 1136
Query: 978 EAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGK 1037
+A+ L + + GE IIRPSS+G +++ T KV+D +Y+ I E K + +G+
Sbjct: 1137 DAILKLQSMDQGECIIRPSSKGSDFISATWKVHDNIYSQITIHEKNKINN-----YTLGE 1191
Query: 1038 TLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK--GSKAEVDELLRIEKAEFPTR 1095
L I + +EDLDEV+ RY+ P+ S+ + ++ ++ FR GS+ E + L + K +
Sbjct: 1192 KLLINGEEYEDLDEVIARYVGPMASNARDLIEHKYFRDIGGSRKEAESLCKEAKRADAKK 1251
Query: 1096 IVYGFGISHEHPGTFILTYIRSTNP--HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRH 1152
I Y + F+L+++ S+N HEY+ P GF++R+ + L YF+ +
Sbjct: 1252 IPYFLSCCRKDICKFMLSFLPSSNSSVKHEYVTALPDGFRYRQVVHSTTATLFQYFKEN 1310
Score = 43.9 bits (102), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 84/210 (40%), Gaps = 43/210 (20%)
Query: 1150 QRHIDDPQGDSAPSIRSVAAMVPMRSP------ANGGSTASAGSGWGGSTNEGGWNRDRS 1203
+RH P G S S R +SP A GG + AG G + EG +
Sbjct: 1481 KRHESSPWGGSDTSGRDRGGNDGGKSPWATRDAAGGGKSPWAG---GDARREGSY----- 1532
Query: 1204 STPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRG-RGRGSNNSNRGNSSNSERQDSSYDTP 1262
S+ RT R D + GGR P GGR RG + + + G+ + S + +
Sbjct: 1533 SSNAPRTPREDNGSFGGR--------TPRGGRTPRGDRTPSYSSGSYPTQQSDSSGWGSK 1584
Query: 1263 KWDSANKSGDDSWGNFPGAKAQNPAGREAFPGGWGSS--GGGGSSGWGGASDG-DNGGWG 1319
+ +KS +WG A++PA A G WGS + WG S +GGWG
Sbjct: 1585 SSRTPSKS---AWG------AKSPA---ASAGSWGSKSPARADAGSWGNKSPTRSSGGWG 1632
Query: 1320 HSSGGADKDSGW-----GGGGSKRSSDGGW 1344
+ ++ GW G GS + GW
Sbjct: 1633 NKPQKKNRSDGWSDAGTAGDGSPERNKSGW 1662
>gi|50293133|ref|XP_448983.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637331|sp|Q6FLB1.1|SPT6_CANGA RecName: Full=Transcription elongation factor SPT6; AltName:
Full=Chromatin elongation factor SPT6
gi|49528296|emb|CAG61953.1| unnamed protein product [Candida glabrata]
Length = 1449
Score = 229 bits (585), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 257/1096 (23%), Positives = 469/1096 (42%), Gaps = 98/1096 (8%)
Query: 54 HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT 113
+DL+ ++ + + + + L++PFI YR+ N +++ D F
Sbjct: 364 YDLTEFKEAVGNAIKFITKENLEVPFIYAYRR------------NYISSRERDGF----- 406
Query: 114 LKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK 173
L LW I LD ++ QS KR + +R Y E L ++ L D K
Sbjct: 407 LLTEDDLWEIVHLDIEF----------QSIINKR--DYVKRFYSE--LGISDPLVDEYFK 452
Query: 174 SLEAAETEREVDDVDLKFN-LHFPPGEVGVDEGQYKRPK------RSTKYSSCSKAGLWE 226
+ ++ + E++ + +N L F + D Q + K +++ Y + L++
Sbjct: 453 N-QSTGSVAELNSLQDIYNYLEFKYAQEINDNLQKESDKSGKKHLKNSNYEKFKSSALYK 511
Query: 227 VASKFGYSSEQLGLQLSLEKM-----GDELEDPKETPE----EMASNFKCAMFNSSQAVL 277
V G S++Q+G +S + E P E E E A + + + N A +
Sbjct: 512 VIEAVGVSADQIGNNISSQHQIHIPKDHEALKPLELIELVLNENAGDLQVFLSNIKLA-M 570
Query: 278 QGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPL 337
+ + EIS VR+ VR+ F +V T G I + +K+ +
Sbjct: 571 DTIQKYYSWEISKNTKVREKVRADFYRYYLVDVVLTTKGKREIQRGSLYEDIKYAINRTP 630
Query: 338 RKFEDAQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWND 393
F + ++ E E L +T+KL S ++ LF E + S A WN+
Sbjct: 631 LHFRREPEIFLKMLEAESLNLMTLKLHMSSQKQYVDHLFQIALE---TTNTSDLAIEWNN 687
Query: 394 QRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
R+ A++ + + +E + + + + K+ PY P
Sbjct: 688 FRKAAFTQAIEK-IFNDIAQEIKDDLEKTCQKLVCKVVRHKFMTKLDQAPY-------VP 739
Query: 454 D--EEAAPRVLACCWGPGKPETTFVM---LDSSGEVV-DVLFTGCLTLRSQNVRDQQSKK 507
D + P++L G G+ + ++ ++ GE V D T +N D+ +
Sbjct: 740 DLKDPKLPKILTLTCGQGRFGSDAIIAAYVNRKGEFVRDFKIT-------ENPFDRSNPD 792
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E + Q + + N L + E+I K V + + I+Y
Sbjct: 793 KFEEVFEDIVQTCQITAIGINGPNPKTQKLFKKLIEVIHK-----KNLVDSKGTHIPIIY 847
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
++ + Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P
Sbjct: 848 VEDEIAIRYQNSERAAQEFPNKPPYVKYCIALARYMHSPLMEYANLSP--EELKSLSIHP 905
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
++FL+P+ IE VD+ N VG+++N A + + L+F+SG G RKA SL
Sbjct: 906 FQSFLSPEYLNRAIETAFVDIVNLVGVEVNKATDNSYYASVLRFVSGFGKRKAIDFLESL 965
Query: 688 VRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESY 745
R + R+ +T + L K +F+N+ GFL + S + D LD TRIHPE Y
Sbjct: 966 QRLNEPLLARQQLITHNILHKVIFMNSAGFLYISWSKKRQRYEDLEHDQLDSTRIHPEDY 1025
Query: 746 GLAQELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKR-- 799
LA ++A + D + +E+ + IE +R+ P+ L++ L+ + +E ++
Sbjct: 1026 HLATKVAADALEYDPDTIAEKEENGTMSEFIEFLREDPNRRSKLESLNLESYAEELEKNT 1085
Query: 800 -ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
+ K L I EL+ GF++ RN + +E F ++GET+ TL +G V+ V R
Sbjct: 1086 GQRKLNNLNTIVLELLDGFEELRNDFHIMQSEEVFSSLTGETDKTLFKGCVIPVRVERFW 1145
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
+CV S + ++ + + ++ K+ I + E
Sbjct: 1146 HNDIVCVTNSEVECIVNAQRHLGAQVRRPPNEIYELNKTYPAKVIFIDYPNITAEVSLLE 1205
Query: 919 SEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADE 978
+++N + DP + + + +E+ + ++ R+I HP + +
Sbjct: 1206 HDVKNEYNPLTYSKDPAIWDLKQELEDSEEEKKVTMAESRAKRTHRVINHPYYFPFNGKQ 1265
Query: 979 AMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKT 1038
A L +KE G+ +IR SSRG +L +T K+ ++ H DI E K++ + +GK
Sbjct: 1266 AEDYLRSKERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQELEKENP-----LALGKV 1320
Query: 1039 LKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVY 1098
L + + DLD+++ Y+ + L + S KF+ G+K EV + + P + VY
Sbjct: 1321 LVVEGQRYHDLDQIIVEYLQNKIRLLNELTSNEKFKAGTKKEVVKFIEDYSKVNPKKSVY 1380
Query: 1099 GFGISHEHPGTFILTY 1114
F +++E+PG F L +
Sbjct: 1381 YFSLNYENPGWFYLIF 1396
>gi|397575829|gb|EJK49909.1| hypothetical protein THAOC_31164, partial [Thalassiosira oceanica]
Length = 1186
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 280/1142 (24%), Positives = 460/1142 (40%), Gaps = 227/1142 (19%)
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP 336
L+ AR++A++E++ EP VR+ +R ++ +AV+ST PT G ++ID+FH+F G+ LR+KP
Sbjct: 66 LRAARYVASMEVAHEPRVRRTLRDMYRQSAVLSTRPTARGAASIDAFHEFYGLHLLRDKP 125
Query: 337 ------------------------------LRKFED---AQWLLIQKAEEEKLLQVTIKL 363
LRK E ++L + +A+ + + + L
Sbjct: 126 VRDHFPSDPAELERKRQRLDAEEAAELERNLRKAESDSCLRYLSLLRADRSGDISLQVHL 185
Query: 364 P------------------------EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELIL 399
P ++ + + YL G WN++R +L
Sbjct: 186 PYVQSSFDDPNVEWHKRPSSELVRERQNIKPMMDVLERCYLPAG--GDTDEWNEERRRVL 243
Query: 400 KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK----DNDITPDE 455
+ AL N LLP E R + A + G++L + + GPY+ +N
Sbjct: 244 RSALLNHLLPQFESETRRDLRDAAVKAGVAAAGESLRSMATEGPYRPSHYLGENRFVRPT 303
Query: 456 EAAPRVLACCWGPGKPETTFVMLDSSGEVVD-VLFTGCLTLRSQNVRDQQSKKNDQERLL 514
P V C + T + SGEV D V G + S +ER++
Sbjct: 304 GDIPVVGVCSSSDAREGTYLAAVTGSGEVADHVAVPGGTNVDSH-----------RERIV 352
Query: 515 KFMMDHQPHV-----------------------VVLGAVNLSCTSLKDDIYEIIFKMVEE 551
F+M +P V N D+ E +E
Sbjct: 353 TFLMTSRPEAVVVGSSGGVGSRATARRLAEIVQVATEKWNNRFVQAADEDDEDFEARMES 412
Query: 552 HPR-----DVGHEMDEL---SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYL 603
R D+ + DE+ ++ D+++ +L+ S + P N+K AV+ RY
Sbjct: 413 FRRMHSGMDLDDDEDEVWKCNVDIVDDNVAQLFGRSVRGKKEFPEFPTNLKVAVSCARYA 472
Query: 604 QNPLAMVATLCGP-------GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDI 656
++PL +A G E+L + PL+ + E+V+ VT VG+D+
Sbjct: 473 KDPLGELAYTWSAASDAGVFGTEMLYLNIHPLQRLVPRTLLLREYERVLCGVTADVGVDV 532
Query: 657 NLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFT-RKDFVTAHGLGKKVFVNAVG 715
N A + L F+ GLGPRKA +L++S R G + + RK + LG V+ NAV
Sbjct: 533 NAACAHDHVHGLLTFVPGLGPRKANNLRQSAERIGGVVSNRKAVLAKRMLGPVVYNNAVA 592
Query: 716 FLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGD--LNDDEDALEM 773
FLRVR + Q Q + LDD+R HP+ Y + K + GD DDE+A+
Sbjct: 593 FLRVRATDQL--EDQRLHPLDDSRCHPDVYQRNRWAVKIAVDALELGDSVAQDDENAI-T 649
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKR-------------------ENKRET--------- 805
AI + D L L D E +R E+ R+
Sbjct: 650 AIRDIMDDSQLEVKRLYDATKSEWERAYGSGTFNTAEWDPKLLPPESWRDKIEELDIEAF 709
Query: 806 ---------------LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
L + + EL ++D R + P F +++GET+ +L G+ V
Sbjct: 710 ADMIEQNGSGKWLTQLTMTKWELRMPYEDPRKPMEPPQGARLFKLLTGETDASLCPGKHV 769
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY 910
V + + LE + G + + +DD +S D + G ++ I ++ +
Sbjct: 770 TGKVIKNNDFGSQIKLEGDVPGFIPLRNLADDHVESA-DDIVQVGTVVNAIITQVKMDHM 828
Query: 911 QVFLVCRESEMRNN-----RYQHCQNLDPYYHEERS-SRQSEQEKARKEK---------- 954
V L + + + R LDPY+ + + +E++K R E+
Sbjct: 829 CVDLSLKREDFKKKSSEWERPASLAPLDPYFDRAAALAIDAEKDKERDERLESLRLKVGG 888
Query: 955 ----------ELAKKH-----FKERLIVHPCFQNVT---ADEAMKLLSAKEPGESIIRPS 996
E H R HP F+N T D +K GE+++RPS
Sbjct: 889 TRIEGDDDAAEGGVAHRRSGKVTRRACAHPAFRNATHDTVDRELKDAGDAMIGEALVRPS 948
Query: 997 SRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRY 1056
++ L + V G +++E KD + IG L + ++ +E +DE++ R+
Sbjct: 949 NKSCDSLAVHWMVRPGCIKVIEVLEEDKD-----TDASIGNRLIVKKEVYESIDELLGRF 1003
Query: 1057 IDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIR 1116
I P+ ++ + +RKF + EVDE L+ K P + Y S +PG L +I
Sbjct: 1004 IAPMNDRVEEVQHHRKFMDKLEDEVDERLQEMKRANPKGVFYQVCWSESYPGYISLRFIM 1063
Query: 1117 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSP 1176
+ + H IG+ P GF + + F ++DRL+ F++ +PQG A R P
Sbjct: 1064 NRSCRHHTIGITPDGFLWGGKTFGNLDRLMNEFKK---NPQGPGA------------RKP 1108
Query: 1177 ANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRTGRNDYRNGGGRDG----HP---SGLP 1229
A+ S +S+ S +T +R SS GSR G + GG RD HP G+P
Sbjct: 1109 ASAPSQSSSSSQQSYTTATDSISRQSSSRWGSRVGSS---AGGSRDSSMLVHPGSLQGMP 1165
Query: 1230 RP 1231
P
Sbjct: 1166 LP 1167
>gi|366988673|ref|XP_003674104.1| hypothetical protein NCAS_0A11650 [Naumovozyma castellii CBS 4309]
gi|342299967|emb|CCC67723.1| hypothetical protein NCAS_0A11650 [Naumovozyma castellii CBS 4309]
Length = 1447
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 248/1091 (22%), Positives = 473/1091 (43%), Gaps = 86/1091 (7%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ + + ++ L++PFI YR+ N + + + D F T
Sbjct: 360 SYDLTEFKEAVGNSIKFINQDNLEVPFIYAYRR------------NYIASKDKDGFVLT- 406
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
LW I DLD ++ + ++ ++ +YK+ +S +++ + +
Sbjct: 407 ----EDDLWDIVDLDIEFHSIIYKRDYVKRFYKELNVVDS---------MVDEYFRNQNA 453
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEV--GVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
S+ + +++ D L+F EV G E K+ +++ Y + L+
Sbjct: 454 ASIAELNSLQDIYDY-LEFTYAQEINEVLLGNTETNGKKHLKNSSYEKFKASELYNAIKD 512
Query: 231 FGYSSEQLGLQL-SLEKMGDELEDPKETPEEMASNFKCA------MFNSS-QAVLQGARH 282
G ++EQ+G + S ++ ++ P P E+ + A +F S+ + + +
Sbjct: 513 IGVTAEQVGENIISQHQIHIAVDHPSLKPREVIESILNANSGDLQVFTSNFKLAIDTVQK 572
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
A+E+S +R+ VRS F + T G I + +K+ + F
Sbjct: 573 YFALELSKNTKIREKVRSDFYKYYLADVVLTSKGKREIQRGSLYEDIKYAINRTPMHFRR 632
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+ ++ E E L +++KL S ++ +F E + S+ A WN+ R+
Sbjct: 633 DPDVFLRMLEAENLNLLSVKLHMSSQAQYIDHMFQIALE---TTNTSELATEWNNFRKSA 689
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY--QRKDNDITPDEE 456
K ALD + + +E + ++ + + K+ P+ KD I
Sbjct: 690 FKQALDK-IFKDISREIKDDLAKTCQKLVAKTVRHKFMTKLDQAPFIPNIKDPKI----- 743
Query: 457 AAPRVLACCWGPGKPETTFVM---LDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERL 513
P++L G G+ +M ++ G+ V N D+ + +N ++ L
Sbjct: 744 --PKLLTLTCGQGRFGADAIMAVYVNRKGDFVKDFKI------VDNPFDKMNPQNFEDTL 795
Query: 514 LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLP 573
+ QP+ + + N + E+I K ++ + GH + IVY D+ +
Sbjct: 796 DNIIQTCQPNAIGINGPNPKTQKFFKRLQEVIHK--KQIVDNRGHS---IPIVYIDDEVA 850
Query: 574 RLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLT 633
Y++S + + P + +K +AL RY+Q+PL + L E+ S + P ++ L
Sbjct: 851 IRYQHSDRGAQEFPNKPPLIKYCIALARYMQSPLLEYSNLAT--EELTSLSIHPHQSLLP 908
Query: 634 PDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA- 692
+E VD+ N VG+++N A + + L++ISG G RKA SL R
Sbjct: 909 QAMLVKALETAFVDIVNLVGIEVNKATDNPYYASALKYISGFGKRKAIDFLESLQRLNEP 968
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQEL 751
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA ++
Sbjct: 969 LLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLATKV 1028
Query: 752 AKEVYNRDIEGDLNDDEDALEMA--IEHVRDRPDL---LKTYLLDRHIKE---KKRENKR 803
A + D + + + ED M+ IE++R+ PD L++ L+ + +E K + K
Sbjct: 1029 AADALEYDPDA-IAEKEDQGTMSEFIEYLREDPDRRTKLESLNLESYAEELEKKTGQRKL 1087
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAI 863
L I EL+ GF++ RN + DE F ++GETE T +G ++ V R I
Sbjct: 1088 NNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGETEKTFFKGCIIPVRVERFWHNDII 1147
Query: 864 CVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRN 923
C S + ++ + + + G K+ I + E ++++
Sbjct: 1148 CTTNSEVECVVNAQRHLGAQLKRPAEELYEVGRTYPAKVIFIDYANITAEVSLLEHDVKH 1207
Query: 924 NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLL 983
+ DP + + + +E+ + A+ R+I HP + +A L
Sbjct: 1208 QYVPITYSKDPSIWDLKQELEDSEEEKKITMAEARAKRTHRVINHPYYFPFNGKQAEDYL 1267
Query: 984 SAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGE 1043
+KE G+ +IR SSRG +L +T K+ ++ H DI E K++ + +G+ L +
Sbjct: 1268 RSKERGDFVIRQSSRGDDHLAITWKLDKDLFQHIDIQELEKENP-----LALGRVLVVEG 1322
Query: 1044 DTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGIS 1103
+ DLD+++ Y+ V L + S KF+ G++ +V + + P R VY F ++
Sbjct: 1323 QRYHDLDQIIVEYLQNKVRLLNELTSNEKFKVGNQRDVVKFIEDYSKVNPNRSVYYFSLN 1382
Query: 1104 HEHPGTFILTY 1114
+++PG F L +
Sbjct: 1383 YKNPGWFYLMF 1393
>gi|385303679|gb|EIF47737.1| transcription elongation factor [Dekkera bruxellensis AWRI1499]
Length = 1480
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 275/1212 (22%), Positives = 497/1212 (41%), Gaps = 148/1212 (12%)
Query: 9 LRKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLD 68
LRK + E V+E WI +L F ++ +D + ++
Sbjct: 334 LRKGIDKYELSDEEFVEEQQWIAKKL-------FDEKSDAFDNAKDIWDPFKDSVFHVVE 386
Query: 69 LLHLQKLDIPFIAMYRKEECLSLLKD---LEQNEVNNDNNDDFERTPTLKWHKVLWAIHD 125
+ L++P I RK+ L ++ L ++ N+N+ LW I
Sbjct: 387 FVCRDNLEVPVIWSCRKDYTLHTYQEDGQLRVQKLLNEND--------------LWRIVQ 432
Query: 126 LDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVD 185
LD ++ + +++ LQ R++D L + LFD + K + +++
Sbjct: 433 LDIEYHGILEKRRGLQ------------RLFDS--LHVVDILFDRLVKGAASIPALQDLH 478
Query: 186 D-VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSL 244
D V ++ E G + R + ++ V G S+E LG +S
Sbjct: 479 DYVSFTYSREMRGNEAGAGRRLHSR---FAPFERIRADPIYRVVEALGMSAEHLGENVSS 535
Query: 245 EKMGDELEDPKETPEEMA---------------------------SNFKCAMFNSSQAVL 277
+ EDP + PEEM +N ++ + +
Sbjct: 536 DARIYVTEDPAQPPEEMVRDVLREGEGEXDGADAHTSGAXAHPAGANAHTPDADAIRTAI 595
Query: 278 QGARHMAAVEISCEPCVRKYVRSIFMDNAVVS---TCPTPDGDSAIDSFHQFAGVKWLRE 334
HM + E++ P +R ++R + A V T P SA S +A K+
Sbjct: 596 DAVVHMYSEELAHSPELRAHLRXAYRRYATVDIXLTAKRPRRKSAPKS--PYADFKYAVN 653
Query: 335 KPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLS-DGVSKSAQLWND 393
+ + F A L E E ++L + F D +LS DG S + WN
Sbjct: 654 RAMESFAYAPDLFPXMLEAEARGLCRVELGLKAAYXGFVDHLFTFLSSDGTSDVSAAWNA 713
Query: 394 QRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
R L AL +LP + + + R+++ L L KV P+ +
Sbjct: 714 LRRRCLDVALGK-MLPVVAAGVKDELRRRSETRLFFRVRDGLLAKVDQAPFXPQGRR--- 769
Query: 454 DEEAAPRVLACCWGPGKPETTFVMLDSS--GEVVDVLFTGCLTLRSQNVRDQQSKKNDQE 511
+ A PRVLA G G+ + + G V+D C+ +N RD + ++
Sbjct: 770 -KGAVPRVLALSNGDGRRDAAVLAAALDRDGAVLD-----CVKF-EENFRDSEFER---- 818
Query: 512 RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
+L+ + P V+ + + L + E+ + G E L ++Y
Sbjct: 819 KLVDLVGRLXPDVIAVSGYTPDVSQLYKHVEELAKRNALGAGAQDGEEFVALPVIYAPNE 878
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
++E+S + + + K + L RY+Q+PL L G I S + +
Sbjct: 879 TALVFEHSARARREFGDKPAVAKFCIGLARYVQDPLVEYIAL---GDAISSVAVDAHQRQ 935
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDIN-LAIHREWQFAPLQFISGLGPRKAASLQRSLVRA 690
L+ + +E + VD+ VG+ +N A E + L++++G G RKAA + R++
Sbjct: 936 LSGAKFXEAVESIFVDMVCLVGVRLNDAARAAEGEARKLRYVAGFGRRKAAGVLRAVAAQ 995
Query: 691 GAIFTRKD-FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF---IDLLDDTRIHPESYG 746
G R+D + + K VF+N F+ + + +F +LLD TRIHPE Y
Sbjct: 996 GGXIARRDELILKRLVAKTVFMNCAAFINL------PAPDRFDGDXELLDATRIHPEDYE 1049
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEMAIEH---------VRDRPDLLKTYLLDRHIKEK 797
LA+++A + DL D++ A IEH + L LL+ + ++
Sbjct: 1050 LARKMASDAL------DLTDEDRA---EIEHEEGGVVGKLYEEGAGKLDDLLLEGYAEQL 1100
Query: 798 KRE--NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVR 855
+R KR TL +I+ EL + F++ R ++ P+ ++ F M++GET + G +V A V+
Sbjct: 1101 ERHGHRKRATLEMIKEELQNNFEELRQPFRVPAPEQVFAMLTGETPRSFRVGLLVPAVVQ 1160
Query: 856 RVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLV 915
RV + V +SG+ G + + L + G + +K+I ++ L
Sbjct: 1161 RVDPRYLXVVTQSGVRGTIXRSAXLPYNDPGSLPARFXPGQPVRAVVKAIDYADFRADLS 1220
Query: 916 CRESEM----RNNRYQHCQNLDPYYHEER-SSRQSEQEKARKEKELAKKHF-------KE 963
++ R + + L + EER + Q + +
Sbjct: 1221 LLREDLEGAERADPVPKFKGLWDFAAEERDGAAQVRXSRMAPAGXVGAXXXSGPAGAASS 1280
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
+L HP F+N++A +A++ L++++ G +IRPSS+GP +L +T K+ + ++ H D+ G
Sbjct: 1281 QLFKHPFFRNLSAPQAVRYLASRDNGAFVIRPSSKGPDHLAVTWKIANQLFQHFDVHIVG 1340
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
+ + V G L++G + DLDE++ +I+ +++ A+ + KFR A+
Sbjct: 1341 Q-----PTSVRPGTMLEVGRFRYHDLDELIVSHINKXYANVVAISHHDKFRDQPAADAKA 1395
Query: 1084 -LLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEY---IGLYPKGFKFRKRMF 1139
LLR KA R Y F + + PG F+L + + + Y + + P GF ++
Sbjct: 1396 WLLRYSKAN-KNRSCYCFCFNRKAPGWFLLLFKLNDDSDRTYTWNVNVLPTGFMLHGNVY 1454
Query: 1140 EDIDRLVAYFQR 1151
D+ L F+R
Sbjct: 1455 PDMVHLCNGFKR 1466
>gi|367001486|ref|XP_003685478.1| hypothetical protein TPHA_0D04110 [Tetrapisispora phaffii CBS 4417]
gi|357523776|emb|CCE63044.1| hypothetical protein TPHA_0D04110 [Tetrapisispora phaffii CBS 4417]
Length = 1468
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 255/1097 (23%), Positives = 465/1097 (42%), Gaps = 100/1097 (9%)
Query: 54 HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT 113
+DL+ +D I + + L++PFI YR+ N +++ + + F T
Sbjct: 383 YDLTEFKDAIGNAIRFISEDNLEVPFIFAYRR------------NNISSTDRNGFVLT-- 428
Query: 114 LKWHKVLWAIHDLDKKW-LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
LW I DL+ ++ ++ KR Y KK YEE L + + D
Sbjct: 429 ---EDDLWEIVDLNIEFNSIIHKR-----DYVKKFYEE----------LQIQDSVVDEYF 470
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVD------EGQYKRPKRSTKYSSCSKAGLWE 226
+ A T D+ L + + D + K+ +++ Y + L+
Sbjct: 471 SNQSTASTAELNSLQDIYNYLEYKYAKEINDLLTKNTQKSGKKHLKNSNYEKFKASPLYA 530
Query: 227 VASKFGYSSEQLGLQLSLEKMGD-----ELEDPKETPE----EMASNFKCAMFNSSQAVL 277
+ G ++EQ+G +S + + E P E + E +S+ + + NS +V
Sbjct: 531 ITKDIGITAEQIGENISSQHQINIPKDHETLKPMEVIDNIITEHSSDLQVFVTNSKLSV- 589
Query: 278 QGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPL 337
+ ++EIS P +R+ VR+ F +V T G I + +K+ +
Sbjct: 590 DTVQKYTSMEISRNPKIREKVRNDFYKYYLVDVVLTFKGRREIQRGSIYEDIKYAINRTP 649
Query: 338 RKFEDAQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWND 393
F L ++ E E L +T+KL S + LF + ++ S+ WN+
Sbjct: 650 VHFRKDPDLFLRMLEAESLNLLTVKLHMSSHVQYADHLFQIALD---TNNTSELGIEWNN 706
Query: 394 QRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
R+ ALD + + E + +S K + +K+ P+ P
Sbjct: 707 FRKTAFNQALDT-IFADISAEIKDDLSKSCKKLVARSVRHKFMSKLDQAPF-------VP 758
Query: 454 DEEAA--PRVLACCWGPGKPETTFVM---LDSSGEVV-DVLFTGCLTLRSQNVRDQQSKK 507
+ E A PR+L G G+ + ++ ++ GE V D T N D+ + +
Sbjct: 759 NMENAKIPRILTITCGEGRFGSDAIIATYINRKGEFVRDFKITD-------NPFDRSNPQ 811
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+ + + Q + + + N + ++I + + + E+ I+Y
Sbjct: 812 KFENTFADIINNCQINAIGINGPNSKTQKFFKKLQDVI-----RQKKLLDNNDKEIPIIY 866
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
++ + Y++S ++ + + VK VAL RY+ +PL A L E+ S + P
Sbjct: 867 VEDEVAVRYQSSERAAQEFANKPPLVKYCVALARYMHSPLLEYANLSM--EELTSLSIHP 924
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
++ L IE VD+ N VG++IN + L++ISG G RKA SL
Sbjct: 925 NQSLLPRGLFVKAIETAFVDIVNLVGVEINKTTDNNYYANALRYISGFGQRKAIDFLDSL 984
Query: 688 VRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESY 745
R + R+ +T + L K +F+NA GFL + + + D LD TRIHPE Y
Sbjct: 985 QRLNEPLLARQQLITHNILHKTIFMNAAGFLYISWNEKRQRYEDLEHDQLDSTRIHPEDY 1044
Query: 746 GLAQELAKEV--YNRDIEGDLNDDEDALEMAIEHVRDRPDL---LKTYLLDRHIKE---K 797
LA ++A + Y D + +D+ + IE +R+ PD L++ L+ + KE K
Sbjct: 1045 HLATKVAADALEYEPDAIAE-KEDQGTMSEFIEILREDPDKKMKLESLNLEAYAKELENK 1103
Query: 798 KRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
+ K L I EL++GF++ RN + DE F ++GETE T +G ++ V
Sbjct: 1104 TGQRKLNNLNTIVLELLNGFEELRNDFHPLQGDEIFQTLTGETEKTFFKGSIIPVRVEFF 1163
Query: 858 QGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
+ IC+ S + + + +S ++ G K+ I +
Sbjct: 1164 RHNDIICITNSQVECVATAQQHSGAQYRRPANELYELGKTYPAKVVFIDYENITAEISLL 1223
Query: 918 ESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTAD 977
E ++++ + DP + + + + + + E A+ R+I HP +
Sbjct: 1224 EQDVKHKYVPFNYSKDPTIWDLKQELEDAEYEKKITMEEARAKRTHRVINHPYYFPFNGH 1283
Query: 978 EAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGK 1037
+A + L +K+ G+ +IR SSRG +L +T K+ ++ H DI E K++ + +G+
Sbjct: 1284 QAEEYLRSKDRGDFVIRQSSRGDDHLAITWKLDKDLFQHIDIQELEKENP-----LALGR 1338
Query: 1038 TLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIV 1097
L + + DLD+++ Y+ + L + S KF+ G+K +V + + P R V
Sbjct: 1339 ILVVEGQRYYDLDQIIVEYLQNKIRLLNEITSNEKFKTGNKKDVIKFIEDYSKVNPNRSV 1398
Query: 1098 YGFGISHEHPGTFILTY 1114
Y F +++E PG F L +
Sbjct: 1399 YYFSLNYEKPGWFYLMF 1415
>gi|443926063|gb|ELU44806.1| transcription elongation factor SPT6 [Rhizoctonia solani AG-1 IA]
Length = 1626
Score = 227 bits (578), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 180/693 (25%), Positives = 315/693 (45%), Gaps = 86/693 (12%)
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
++YG + + R+Y++S + + + V+L RY+QNPL A L G ++ +
Sbjct: 926 LMYGHDEVARIYQHSPRAEAEFSALPLVARYCVSLARYVQNPLNEYAAL---GSDLTAVT 982
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+N + D+ +E+ +V++ N VG+DIN A++ + L +++GLGPRK+
Sbjct: 983 FTEAQNLIPKDKLLVALERAIVNIVNNVGVDINRAVNDPYHRTLLPYVAGLGPRKS---- 1038
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-------IDLLDD 737
G + R +F+ + + ++F+N GFL V + + ++ D LD+
Sbjct: 1039 ----EGGTVVNRSNFIKQNLVPTQIFINCCGFLYVPQDPDSKEIARVRDHYEDVPDPLDE 1094
Query: 738 TRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD---RHI 794
TRIH E Y LA+++A + D E + + + D L+ LD + +
Sbjct: 1095 TRIHYEDYDLARKMALDALEMDDEDVVGKHPSVIVYDLMQKDDNVQKLEELSLDDFAQLL 1154
Query: 795 KEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV 854
K+ E KR TL +IR EL+ F D R + P + + M+SGET TLA GRV+ +V
Sbjct: 1155 KDMSNEQKRHTLNMIREELLRPFGDQRESFVPPDEWKVMTMLSGETVKTLAPGRVISVSV 1214
Query: 855 RRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
R+ L+SG+ G++ E Y D + L +G + I +I + V L
Sbjct: 1215 LRIMKSFVSVRLDSGVDGIINLE-YVDREPGQSVEQVLRKGQTIQAVIIAINLKKLSVEL 1273
Query: 915 VCRESEMRNNRYQ-HCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQN 973
R +++ Q D YY ++ ++++ + E RK+ A+ R+I HP F N
Sbjct: 1274 SARATDIEKGDAQTRMPQFDQYY-DKHAAQRLQDELHRKKMRAAES--SRRIIKHPNFHN 1330
Query: 974 VTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLV 1033
A +A + L+ + G+ +IRPSS+GP++L +T KV +GVY H + + D
Sbjct: 1331 FNATQAHQYLANQHRGDVVIRPSSKGPTHLAVTWKVDEGVYQHIGELNTPGNAGD----Q 1386
Query: 1034 GIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAE- 1091
+GK L I G+ + DLDE++ +++ + ++ ++++ K++ GS+AE+ E + E
Sbjct: 1387 SVGKQLIIDGKYEYSDLDELIVNHVNAMARKVEELIAHEKYKAGSEAELREWMTFSWDEG 1446
Query: 1092 FPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQR 1151
P R++ P+G+ + L F+
Sbjct: 1447 LPVRVI-------------------------------PEGYVLIDTPVPTVPDLCNAFKM 1475
Query: 1152 HIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGSRTG 1211
PQ + R+PA G + G+ G+ G TPG G
Sbjct: 1476 RYSTPQTTA-------------RTPAYGAGRMTPGAISVGARTPG------HRTPGHPMG 1516
Query: 1212 ---RNDYRNGGGR-DGHPSGLPRPYGGRGRGRG 1240
N Y GG + + + P PY G+ + G
Sbjct: 1517 GKTPNPYATGGKTPNPYAARTPNPYAGQQQASG 1549
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 213/478 (44%), Gaps = 49/478 (10%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
LD + Q L+IP+I ++R++ + + L + LW + L
Sbjct: 376 LDYVVNQYLEIPYIWVHRRDYISHF---------------ELRQRVELLTREELWKVGIL 420
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
K+ L +R+SAL++ ++K E + Y E +L N SIS +A E
Sbjct: 421 GLKFRALLERRSALEATFRKL---EVQDEYFEKQLLPN---LTSISMVADATEW------ 468
Query: 187 VDLKFNLHFPPGEVGVD---EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS 243
+ +K+ E D E ++K P R + Y + +A FG Q+ + S
Sbjct: 469 LSVKYKQRKKDIEATADDMAEKKHKNPSRVSAYEVARGTIVSRLADDFGLPPHQIAINFS 528
Query: 244 LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM 303
+K+ +D P A F +++ L AR + A E+ +P +R+ +R+ F
Sbjct: 529 GQKVHFP-DDQDLPPRAYAEQFITESCPTAEEALTTARMIIATELGRDPQLREAIRNQFK 587
Query: 304 DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA-QWLLIQKAEEEKLLQVTIK 362
+ A++S PT G + ID H G K+L EKP+ + Q+L I AE E LL V I
Sbjct: 588 EQALLSCEPTEKGKTKIDEAHACYGFKFLVEKPIETLTSSPQYLHILGAESELLLNVEIT 647
Query: 363 LPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
++++ + + Y SD S SA+ WN+QR ++ +AL+ L+P + + +
Sbjct: 648 ATRSRMHEITTSLENAYASDSFSDSAKAWNEQRRAVIAEALEKHLIPQAITWTKEWLREE 707
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE---TTFVMLD 479
+ +L + + L +V++ P + KD + PD+ P ++ WG G+P V LD
Sbjct: 708 VEDYLANKAAEQLEKRVNMSPCRPKDL-VGPDD--VPSAVSMSWGKGEPNKDPIHLVYLD 764
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
G F L L D S ++++ L + +P V+V+G ++ L
Sbjct: 765 EEGR-----FREHLRL------DNLSDADNRQEFLDLLKRRKPDVIVIGGFTVATKHL 811
>gi|145245521|ref|XP_001395028.1| hypothetical protein ANI_1_2568094 [Aspergillus niger CBS 513.88]
gi|134079731|emb|CAK40869.1| unnamed protein product [Aspergillus niger]
Length = 642
Score = 227 bits (578), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/605 (26%), Positives = 298/605 (49%), Gaps = 33/605 (5%)
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
D L +V ++ + RLY++S + P VAL +YLQ+PL A+L GR+I
Sbjct: 44 DRLEVVIVNDEVARLYQHSERAKKDHPSFAPLTHYCVALAKYLQSPLKEYASL---GRDI 100
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
+S + P + ++ D +E +VD+ N VG+DIN A+ L ++ GLGPRKA
Sbjct: 101 VSIQFKPGQQLVSQDLLLKQLETALVDMVNLVGVDINEAVTDSATANLLPYVCGLGPRKA 160
Query: 681 ASLQRSL-VRAGAIFTRKDFVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A L + + + G + R + + + +G KV+ N FL + + D L
Sbjct: 161 AHLLKIVNMNGGVVNNRAELLGVNAQYPAMGVKVWNNCASFLYIDFENADPDA----DPL 216
Query: 736 DDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTY 788
D+TR+HPE Y +A+++A + D E D+ + D ++ E +DR + L
Sbjct: 217 DNTRVHPEDYDIARKMAADALELD-EEDIKAETDENGPGAIVRKLFREEAQDRVNDLILE 275
Query: 789 LLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGR 848
+++ + KR TL IR EL +++ R Q+ S D+ F M++GET +TL+EG
Sbjct: 276 EYAEQLEKNLNQRKRATLETIRAELQQPYEELRKQFVFLSTDDIFTMLTGETAETLSEGM 335
Query: 849 VVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
VV +++R+ L+ G+ ++ + + +D + D + L K+ + +
Sbjct: 336 VVPISIKRITDDHIDGKLDCGIDALVPESELTDRY-DIPVRALYQIHQTLPAKVLFLNRK 394
Query: 909 RYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVH 968
+ + RE ++ + L E RQ Q++ ++++ R+I H
Sbjct: 395 NFLCNVSLREEQVSRPVLRTPDRL----QGEWDDRQEAQDREAQQEKTQSGGRTMRVIKH 450
Query: 969 PCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKD 1028
P F+ + +A + L ++ G+ +IRPSS+GP +L +T KV DG++ H D++E K+++
Sbjct: 451 PLFRPFNSTQAEEFLGSQSRGDVVIRPSSKGPDHLAVTWKVSDGIFQHIDVLELDKENE- 509
Query: 1029 IKSLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRI 1087
+G+TLK+ G T+ DLD+++ ++ + + M+ + K++ G+K L
Sbjct: 510 ----FSVGRTLKVGGRYTYSDLDDLIFNHVKAMTKKVDEMMLHEKYQDGNKDATYSWLET 565
Query: 1088 EKAEFPTRIVYGFGISHEHPGTFILTYIRSTN-PHHEY-IGLYPKGFKFRKRMFEDIDRL 1145
P R Y F I +H G F L + P H + + + P+G++ ++ + D+ L
Sbjct: 566 YTKANPRRSAYAFCIDPKHAGYFFLCFKAGEKAPLHSWPVKVIPQGYELQRNPYPDMRAL 625
Query: 1146 VAYFQ 1150
F+
Sbjct: 626 CNGFK 630
>gi|449687351|ref|XP_002165658.2| PREDICTED: transcription elongation factor SPT6-like [Hydra
magnipapillata]
Length = 706
Score = 223 bits (567), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 275/551 (49%), Gaps = 77/551 (13%)
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
R VT +G +VF+N GF+R+ + + ++ ++LD TRIHPE+Y +++A +
Sbjct: 48 RSQLVTVCEMGLQVFLNCAGFIRI----EPSEANDKYEVLDGTRIHPETYDWPRKMAIDA 103
Query: 756 YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRE 812
+E D +E A+E + ++PD LK LD +E R+ NK+ TLY IR E
Sbjct: 104 ----LEYDDGMEESNPSSAVEEILEQPDRLKDLDLDAFAEELARQGYGNKQITLYDIRDE 159
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
LI+ F+D R +K S +E F +++GET+ +L G+++ V ++ E +
Sbjct: 160 LINRFKDHRPTFKGLSIEERFQLLTGETQQSLYYGKMITCVVTGFACKKP--TREQLDSA 217
Query: 873 MLMKEDYSDDWRDS--------ELSDKLHEGDILTCKIKSI-----QKNRYQVFLV---- 915
+ D ++ WR ELS+ D +C +SI +N F+
Sbjct: 218 NPTRNDETNLWRCPFCLRDNFFELSEVWTHFDNGSCPGQSIGVRTRLENGINGFISTKNI 277
Query: 916 ----CRESEMRNN------------RYQHCQ---------------NLDP----YYHEER 940
C+ E R Y+ Q N P YY +E
Sbjct: 278 SDKGCKRPEERVKVGMTLHARVIKINYERIQVDLTCKTSDLTDAHGNFSPPRDMYYDQEA 337
Query: 941 SSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGP 1000
+ + + E+ K + + +R+I HP F+NVT +A KLL + GE I+RPSS+G
Sbjct: 338 ADKDKKAEELLKIALTKRTTYVKRVIAHPSFKNVTFKDAEKLLETMDQGECIVRPSSKGT 397
Query: 1001 SYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPL 1060
+LT+T KV +G+Y H D+ E GK++ IG++L I + +EDLDEV+ +I P+
Sbjct: 398 DHLTVTWKVDNGIYQHIDVREEGKENA-----FSIGRSLWIDNEEYEDLDEVMAHHISPM 452
Query: 1061 VSHLKAMLSYRKFRK--GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRST 1118
+H + +L+++ +++ G +A+++E+L EK + P RI Y F + ++PG F+L Y+
Sbjct: 453 ATHARELLNHKYYKETGGVRAKLEEILTQEKRKTPGRIPYFFASNKQYPGKFMLGYMPRL 512
Query: 1119 NPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP-QGDSAPSIRSVAAMVPM---- 1173
P E++ + GF++R R+ + + L+ +F+ H DP G P R+ PM
Sbjct: 513 KPKIEFVTVTRDGFRYRGRIHANTNNLLKWFKEHFRDPIPGVGTPLRRTPHNQTPMSIIG 572
Query: 1174 RSPANGGSTAS 1184
+P G+T S
Sbjct: 573 STPYTPGATPS 583
>gi|285917672|gb|ADC39144.1| Spt6 [Candida albicans]
Length = 649
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 167/618 (27%), Positives = 293/618 (47%), Gaps = 50/618 (8%)
Query: 516 FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE-----LSIVYGDE 570
F D P VVV+ N + L D +Y+ V E+ V E D+ + +++G +
Sbjct: 7 FDEDETPDVVVVSGYNANTKRLHDVVYD----FVSEYGISVKSEFDDGSSQLVKVIWGQD 62
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLEN 630
RLY+NS + + P + VK A++LGRYLQ+PL TL G +ILS +
Sbjct: 63 ETARLYQNSERAKKEFPDKPTLVKYAISLGRYLQDPLLEYITL---GDDILSLTFHEHQK 119
Query: 631 FLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV-R 689
++ D ++E VD+ N VG+DIN ++ L+++ GLGPRKA+ + R++ +
Sbjct: 120 LISNDLVKEVVESAFVDLANAVGVDINESVRDSRLAQTLKYVGGLGPRKASGMLRNIAQK 179
Query: 690 AGAIFT-RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
G++ T R + + +F+N L++ + I++LD TRIHPE Y LA
Sbjct: 180 LGSVLTTRSQLIEYELTTRTIFINCSAALKISLNKSINVKDFEIEILDTTRIHPEDYQLA 239
Query: 749 QELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYL 808
++A + + D E +L++ ++ +E+ + +LL I + + K +L
Sbjct: 240 MKMAADALDMDEESELHEKGGVIKELLENDPSKLNLLNLNDFANQIYKLTHKLKFRSLQA 299
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQ-------- 860
IR ELI GF + R+ ++ + ++ F++++GE L + V+ AT+ +V
Sbjct: 300 IRLELIQGFAEIRSPFRILTNEDAFFILTGEKPQML-KNTVIPATITKVTKNHHDPYARI 358
Query: 861 RAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
R + V+ L + E+ RD+E + + + + L R +
Sbjct: 359 RGLKVVTPSLIQGTIDENAIP--RDAEYVQGQVV----QAVVLELHTDTFAAVLSLRRED 412
Query: 921 ----MRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTA 976
M+ + D +E R EKA++ +LAK R I HP ++N
Sbjct: 413 ISRAMKGGVVREYGKWDYKAEDEDIKR----EKAKENAKLAKT----RNIQHPFYRNFNY 464
Query: 977 DEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIG 1036
+A + L+ + G+ +IRPSS+G SYLT+T KV + ++ H + E + G
Sbjct: 465 KQAEEYLAPQNVGDYVIRPSSKGVSYLTITWKVGNNLFQHLLVEERSR---------GRF 515
Query: 1037 KTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRI 1096
K + T+EDLD++ ++I + ++ M+ + K R+G+ + V E L P
Sbjct: 516 KEYIVDGKTYEDLDQLAFQHIQVIAKNVTDMVRHPKLREGTLSVVHEWLESYTRANPKSS 575
Query: 1097 VYGFGISHEHPGTFILTY 1114
Y F H+ PG F+L +
Sbjct: 576 AYVFCYDHKSPGNFLLLF 593
>gi|145513532|ref|XP_001442677.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410030|emb|CAK75280.1| unnamed protein product [Paramecium tetraurelia]
Length = 1469
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 226/966 (23%), Positives = 405/966 (41%), Gaps = 147/966 (15%)
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQW 345
+E+ P +R Y+ I+ +N ++ST PT G+ I + F VK +R + + ED W
Sbjct: 418 MELYHHPFIRDYISQIYRENLLISTEPTQLGNREITAVSYFYPVKRIRHRQYKYMEDQTW 477
Query: 346 LLIQKAEEEKLLQVTI-----------KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQ 394
+ +AE+ +++ K+P+D + L D + D K +
Sbjct: 478 MQCLRAEQLGYIKINFAISKDKDHKKEKIPKDDIMVLLYD--KFVKIDDQQKEQENILRI 535
Query: 395 RELILKDALDNFLLPSM---VKEARSLMSGRAKSWLLMEYGKALWNK----VSVGPYQRK 447
R+L+L+ L P + +K +S + + + K L NK VG Q+
Sbjct: 536 RDLVLRGILQEIWYPILERQIKYKLQTLSSKHIVRMCQQKFKQLINKQPHISEVGNNQQM 595
Query: 448 DNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
I PD + V+ K ++D GE + LT + + +
Sbjct: 596 QQTINPDVKIMSLVIGSEQTDSKKYIGMSVIDYKGEQQTLQIFNYLTQDERRTEMLEQIR 655
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+Q L F ++P +VV+ A + C L+ D+ R + + I
Sbjct: 656 KEQALLDNFFEKYKPDLVVISANHSDCLKLRADL------------RKKYQQTSSVWITL 703
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGRE---ILSWK 624
D + R+Y S S+ QLP +K A++L RY NP+A V L + L
Sbjct: 704 ADSQISRIYSMSEKSNLQLPDIPQILKEAISLARYKLNPMAEVLNLWSDAIDKNGCLHLN 763
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLD-INLAIHREWQFAPLQFISGLGPRKAASL 683
L PL+ ++ ++Q ++ NQVG+D ++ +H+ +QFI+GLG R+A L
Sbjct: 764 LHPLQAMVSQQVLLDALKQTATEIVNQVGVDLVDCTLHKHLA-DQMQFINGLGRRQAKHL 822
Query: 684 QRSLVR---AGAIFT------------------------RKDFVTAHGLGKKVFVNAVGF 716
++V+ + ++F R+D + L K VF N GF
Sbjct: 823 -LTMVKGLLSKSLFNNNYEDERLIYSKLEQDQKEYIQIQRQDILKTQILKKVVFKNVQGF 881
Query: 717 LRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYNRDIEGDLNDDEDALEM 773
++++R Q LD TR+ + Y A +AK EV R ED
Sbjct: 882 IKIQRGIQP---------LDITRMQIKMYSDAVHIAKCALEVGGR---------EDRQNT 923
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLI----RRELIHGF-QDWRNQYKEPS 828
+ + +P ++ L+ K++++++ E L+ + EL + F + KE S
Sbjct: 924 IVRQLMSQPQKMEELQLEDWAKQREQKDGSEKFTLVAQFMKEELTNPFLYKFDTANKEMS 983
Query: 829 QDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA---------ICVLESGLAGMLMKEDY 879
E FY I+ E+ T + +VQ + + + I + ++GL G L +ED
Sbjct: 984 NSEIFYAITQESPYTFRKNSIVQGQITKKIESKEKSKDTDKLLIKLSDNGLCGTLRREDM 1043
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSI------QKNRYQVFLVCRESEMR-----NNRYQH 928
L + G I+ +K I KN L+ S + Y
Sbjct: 1044 --------LQQEFGIGQIIKAYVKKIPATENNNKNDSLNILIIELSLKSDWSRWDQEYLK 1095
Query: 929 CQNLDPY-----YHEERSSRQSEQEKARKEKEL-----------AKKHFKERLIV----H 968
DP+ +E+ ++ + K K+ K+ +++LI+ H
Sbjct: 1096 PSKYDPWPYSNISYEDYCTKVMQTFDQSKFKDFDQPTIPQDQMPNKQKQQQKLILRNINH 1155
Query: 969 PCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKD 1028
P F+ V A++ + ++ GE IIRP+ R +LT+T K Y+GV +H + ++
Sbjct: 1156 PKFKQVLLKGALEYIESQPVGEYIIRPNQRLKDHLTITWKFYEGVISHLYV-------QE 1208
Query: 1029 IKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIE 1088
+K+ L + +E DE+ + YI P H++A+++ +KF GS +++ LR +
Sbjct: 1209 LKTAQSYKPQLVLNGKNYESFDEIYESYITPCNLHMEAVVNNKKFHHGSMEQLERKLRED 1268
Query: 1089 KAEFPTRIVYGFGISHEHPGTFILTYIRSTNP-HHEYIGLYPKGFKFRKRMFEDIDRLVA 1147
K + I YGF ++ + P +L Y++ N EYI + P+G F M ++ L
Sbjct: 1269 KEKDEEIIPYGFCVTDKAPQYIVLMYMKQKNKVEKEYIKVKPEGLSFHSVMQNNLKDLTL 1328
Query: 1148 YFQRHI 1153
+F+++
Sbjct: 1329 WFKKNF 1334
>gi|47221818|emb|CAG08872.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1671
Score = 203 bits (516), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 260/541 (48%), Gaps = 99/541 (18%)
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
+ +I++LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+ LK
Sbjct: 890 TDSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKD 945
Query: 788 YLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
LD +E +R+ NK TLY IR EL ++D R Y+ P+ +E F M++ ET +T
Sbjct: 946 LDLDAFAEELERQCYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFNMVTKETPETF 1005
Query: 845 AEGRVVQATV-----RRVQGQ--------------------------------------- 860
G+++ + V RR QG+
Sbjct: 1006 YIGKLITSIVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELSEVWNHFDSGSC 1065
Query: 861 --RAICV---LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLV 915
+AI V L++G+ G + + SD +++ G + C+I I ++ V L
Sbjct: 1066 PGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHP-EERVKVGMTVHCRIMKIDIEKFSVDLT 1124
Query: 916 CRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKH--------------- 960
CR S++ + + D YY + S +Q++ K+K+ +
Sbjct: 1125 CRTSDLMDKANEWKLPKDSYYDFDTESEDQKQDEELKKKQQRTRQCDLDTPTDVFVLRIY 1184
Query: 961 --------------FKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLT 1006
+ +R+I HP F N++ ++A K++ + G+ IIRPSS+G ++LT+T
Sbjct: 1185 IFTDRDSLLPLSVAYIKRVIAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVT 1244
Query: 1007 LKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKA 1066
KV DG+Y H D+ E GK++ +G TL I + FEDLDE+ RYI P+ S +
Sbjct: 1245 WKVADGIYQHVDVKEEGKENA-----FSLGHTLWINTEEFEDLDEITARYIQPMASFARD 1299
Query: 1067 MLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHE 1123
+L ++ F++ GSK +++ELL K E PT I Y + PG F+L Y P E
Sbjct: 1300 LLGHKYFQECNGGSKEKMEELLVRTKREKPTFIPYFVSACKDLPGKFLLGYQPRGKPRVE 1359
Query: 1124 YIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTA 1183
Y+ + P GF++R ++F ++ L +F+ H +P PS S R+PA+ +T
Sbjct: 1360 YVTITPDGFRYRSQIFPTVNGLFRWFKDHYHEPVPGITPSNSSRT-----RTPASLNATP 1414
Query: 1184 S 1184
+
Sbjct: 1415 A 1415
Score = 196 bits (498), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 185/733 (25%), Positives = 303/733 (41%), Gaps = 136/733 (18%)
Query: 29 WIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRD------DIMRFLDLLHLQKLDIPFIAM 82
WI+ S TL + Q G + SR I L+ + Q ++PFIA
Sbjct: 182 WIFRHGFS-TLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQLFEVPFIAF 240
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE + E+N ++ LW + D+KW L+ RK L
Sbjct: 241 YRKEYV--------EPELNIND---------------LWKVWQWDEKWTQLKTRKQNLTR 277
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETE----REV-------------- 184
++K + +I + ++ L D I + L+ A+ E +EV
Sbjct: 278 LFQKMQSYQFEQISADP----DKPLADGI-RPLDTADMESVTVKEVSEDGKMRDEWMEWS 332
Query: 185 ---DDVDLK--FNLHFPPGEVGVDEGQ----YKRPKRSTKYSSCSKAGLWEVASKFGYSS 235
D V L ++L +E Q K R YS C GL +A KFG +
Sbjct: 333 FKSDSVCLMSVYSLGEEEELEIEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTP 392
Query: 236 EQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR 295
EQ G L E E P E+A ++ C+ F++ +AVL+G R+M A++I+ EP VR
Sbjct: 393 EQFGENLRDSYQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTRYMVAMQIAREPLVR 452
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEK 355
+R F + A ++ PT G +D H K+L+ KP+++ Q+L + AE+E
Sbjct: 453 HVLRQTFQERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELTGEQFLKMCLAEDEG 512
Query: 356 LLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLP 409
LL + I + + F + K+ Y D S Q WN QR L ++ AL FL P
Sbjct: 513 LLSIDICIDLVGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYP 572
Query: 410 SMVKEARSLMSGRAKS-------------WLLMEYG--------------KALWNKVSVG 442
M KE +S + AK W+ ++ + L+N + V
Sbjct: 573 QMAKELKSKLIAEAKESIVRVSCLLQHTMWIFKKFKNKTLFFSASSQSCCRRLYNWLKVA 632
Query: 443 PYQ-----RKDNDITPDEEA-APRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTL 495
PY+ +D+D+ + + RVL + P + F +++ GEVVD L
Sbjct: 633 PYRPDHLAEEDDDLMDESQGKGIRVLGVAYAPSRDTPVFCALINGEGEVVDFLRLPYFMK 692
Query: 496 RSQNVRDQQSKKN----------------------------DQERLLKFMMDHQPHVVVL 527
R R+++ +K D E L KF+ +PHV+ +
Sbjct: 693 RRNAFREEEREKKVRKQSRQGVAGHYSELTALESVCLLQALDIENLKKFLSSKKPHVIAV 752
Query: 528 GAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
N + +D+ I ++ +E + + + D L LY NS+ S
Sbjct: 753 AGENRDAQMIMEDMKRAISELEQE------SALPAVGVELVDNELATLYMNSKKSEADFR 806
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+++AV++ R +Q+PL A +C +IL KL PL+ + ++ + ++
Sbjct: 807 DYPPLLRQAVSVARKIQDPLMEYAQVCSTDEDILCLKLHPLQEHVVKEDLLSALYCEFIN 866
Query: 648 VTNQVGLDINLAI 660
N+VG+D+N AI
Sbjct: 867 RVNEVGVDVNKAI 879
>gi|298205072|emb|CBI40593.3| unnamed protein product [Vitis vinifera]
Length = 149
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 116/149 (77%), Gaps = 11/149 (7%)
Query: 1067 MLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIG 1126
ML+YRKFR+G K EVD+LLR EK+++P RIVY FGI HEHPG FIL+YIR+TNPHHEYIG
Sbjct: 1 MLNYRKFRRGKKVEVDDLLRAEKSDYPMRIVYCFGICHEHPGAFILSYIRNTNPHHEYIG 60
Query: 1127 LYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAG 1186
LYPKGFKFR+ F+ IDRLVAYFQ+HIDDP + APSI+SVAAMVPMRSPA G T
Sbjct: 61 LYPKGFKFREHTFDTIDRLVAYFQKHIDDPWPEKAPSIQSVAAMVPMRSPAVGAPT---D 117
Query: 1187 SGWGGSTNEGGW------NRDRSSTPGSR 1209
GW +N GGW +RD++ +P SR
Sbjct: 118 GGW--ESNTGGWRGQFNSSRDKTCSPSSR 144
>gi|441661221|ref|XP_003277142.2| PREDICTED: transcription elongation factor SPT6 [Nomascus leucogenys]
Length = 658
Score = 197 bits (502), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 232/468 (49%), Gaps = 71/468 (15%)
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
A+E + + P+ LK LD +E +R+ +K TLY IR EL ++D R Y+ P+ +
Sbjct: 20 ALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTE 79
Query: 831 EEFYMISGETEDTLAEGRVVQATV-----RRVQGQ------------------------- 860
E F M++ ET +T G+++ V RR QG+
Sbjct: 80 EIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDDTGLWQCPFCQQDNFP 139
Query: 861 ----------------RAICV---LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCK 901
+AI V L++G+ G + + SD +++ G + C+
Sbjct: 140 ELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRP-EERVKVGMTVHCR 198
Query: 902 IKSIQKNRYQVFLVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKK 959
I I ++ L CR S++ RNN ++ + D YY + + +QE+ K K+
Sbjct: 199 IMKIDIEKFSADLTCRTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTT 256
Query: 960 HFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDI 1019
+ K R+I HP F N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+
Sbjct: 257 YIK-RVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDV 315
Query: 1020 IEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---G 1076
E GK++ +G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G
Sbjct: 316 REEGKENA-----FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGG 370
Query: 1077 SKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRK 1136
+ +++ELL K E PT I Y E PG F+L Y P EY+ + P+GF++R
Sbjct: 371 DRKKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRG 430
Query: 1137 RMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
++F ++ L +F+ H DP PS S R+PA+ +T +
Sbjct: 431 QIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT-----RTPASINATPA 473
>gi|260940290|ref|XP_002614445.1| hypothetical protein CLUG_05931 [Clavispora lusitaniae ATCC 42720]
gi|238852339|gb|EEQ41803.1| hypothetical protein CLUG_05931 [Clavispora lusitaniae ATCC 42720]
Length = 1432
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 178/685 (25%), Positives = 311/685 (45%), Gaps = 57/685 (8%)
Query: 208 KRPKRSTKYSSCSKAG---LWEVASKFGYSSEQLGLQLSLEKMGD--------ELEDPKE 256
K K+ +KY+ + L++ FG S+++ G + + + +DP E
Sbjct: 458 KGTKKHSKYAIFERIRENVLYDAVKGFGISAKEFGENVQDQSTKNYEVPYRIHATDDPYE 517
Query: 257 TPEEMASNF---KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
+PE+M +F + L R A EI P +R VR +F + A VS T
Sbjct: 518 SPEDMIGRLVEDDEVLFKDPKNALSAVRKTFAEEIFHNPKIRHEVRQVFKNFASVSVALT 577
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
G + ID+ +A +K+ +++ +L++ E E + +K+ +
Sbjct: 578 EKGRNTIDNHSVYADIKYAKDRTPADLVSKPDVLLRMLEAEANGLIVVKVRTSDYESWYQ 637
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVK-EARSLMSGRAKSWLLMEYG 432
SDG S+ ++LWN +R+L L A L SMV + + + + +E
Sbjct: 638 SIFNCLKSDGTSEISELWNSERDLALSMAFKR--LTSMVSLNTKEDLRRECERLIGVELR 695
Query: 433 KALWNKVSVGPYQRKDNDITP---DEEAAPRVLACCWGPGKPETTFV--MLDSSGEVVDV 487
KV P+ TP D+ P VLA +G G ++ V + SG+ +D
Sbjct: 696 TRFLAKVDQAPF-------TPFGYDKGTKPNVLALSFGKGDFDSAVVGAFVRDSGK-IDE 747
Query: 488 LFTGCLTLRSQN--VRDQQSKKNDQERLLKF----MMDHQPHVVVLGAVNLSCTSLKDDI 541
F +S N RD++S++ +L +F + + +P V+V+ + + L D +
Sbjct: 748 FF------KSDNNPSRDRESEEKFSGQLREFFDRTLRNRKPDVIVVSGYSAATKRLFDIV 801
Query: 542 YEIIFK-----MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA 596
+ K V++ P + L +++G + RLY+NS + +L + VK
Sbjct: 802 KNFVMKENLLANVDDLPNISDPPL--LPVIWGQDETARLYQNSERALIELSDKPTLVKYC 859
Query: 597 VALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDI 656
V L RY+Q+PL +L +ILS + L+ D + E V VD+ N VG++I
Sbjct: 860 VGLARYVQSPLMEYVSLKD---DILSLSFYEHQKLLSHDMIKDIFETVFVDIVNMVGVEI 916
Query: 657 NLAIHREWQFAP-LQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLGKKVFVNAV 714
N A+ R+ Q A L +++GLGPRKA+ L R++ + G + TR D + +F N
Sbjct: 917 NEAL-RDPQVAQLLSYVAGLGPRKASGLIRNISAKLGTLSTRSDLIENELSTANIFFNCS 975
Query: 715 GFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA--LE 772
FL + I+LLD TRIHPE Y LA+++A + + D E + +E +
Sbjct: 976 SFLNFPYDEGLSVRDSSIELLDATRIHPEDYSLARKMAADALDLDEEDMAHIEEQGGIIY 1035
Query: 773 MAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEE 832
++ + D L + ++ + K TL I+ EL++ +++ R + E
Sbjct: 1036 QLMQEGVSKVDDLNLTAFGKELESNFGKKKYATLQSIKEELVNNYEELRRSFHLLDSSEV 1095
Query: 833 FYMISGETEDTLAEGRVVQATVRRV 857
F M++GET ++ + G +V T+ RV
Sbjct: 1096 FKMLTGETTESFSRGSIVPVTINRV 1120
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 24/228 (10%)
Query: 948 EKARKEKELAKKHFK---ERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLT 1004
E+ K+KE AK++ K R I HP F N +A + L+ + G+ +IRPSSRG +YLT
Sbjct: 1206 EEEDKQKERAKENTKLARTRNIQHPLFHNFNHKQAEEFLAPQAVGDCVIRPSSRGQNYLT 1265
Query: 1005 LTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHL 1064
+T KV + ++ H + E + GK + + DLD+++ +++ + H+
Sbjct: 1266 VTWKVANNLFQHLSVEEVTNSN---------GKEYIVDRKRYSDLDQMIFQHVQAIAKHV 1316
Query: 1065 KAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNP---- 1120
M + KFR+G+ EV+E L P Y F H+ PG F+L + + N
Sbjct: 1317 NEMCRHPKFREGTLGEVNEWLESYTRANPKNSAYVFCYDHKAPGWFLLLFKVNVNTPITT 1376
Query: 1121 ---HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIR 1165
E G KGF + M RL F++ D++ S R
Sbjct: 1377 WHVKTECNGFVLKGFSYPNMM-----RLCNGFKQTFKSLMNDNSRSAR 1419
>gi|327289844|ref|XP_003229634.1| PREDICTED: transcription elongation factor SPT6-like, partial
[Anolis carolinensis]
Length = 1095
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 169/633 (26%), Positives = 266/633 (42%), Gaps = 104/633 (16%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N T+ L + RG + + I L+ + Q ++PFIA
Sbjct: 315 WIYRNAFAMPTISLQEGLEYLDRGQATSSFSRKGPSTIQKIKEALNFMRNQHFEVPFIAF 374
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE P L LW + D+KW L+ RK L
Sbjct: 375 YRKEYV----------------------EPELHISD-LWRVWQWDEKWTQLKIRKQNLTR 411
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 412 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 466
Query: 195 F----PPGEVGVDEGQYKRPK-----------------------------RSTKYSSCSK 221
+ P + + K+ + R Y+ C
Sbjct: 467 YGRDIPRMQNAAKASRKKQKRLREDGEEEEAEGEDAEDEEQKAPELKQASRRDMYTICQA 526
Query: 222 AGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGAR 281
AGL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GA
Sbjct: 527 AGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGAC 586
Query: 282 HMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE 341
+M A++I+ EP VR+ +R F + A ++ CPT G ID H K+L+ KP+++
Sbjct: 587 YMVALQIAREPLVRQVLRQTFQERAKINVCPTKKGKKDIDEAHYAYSFKYLKNKPVKELR 646
Query: 342 DAQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQR 395
D Q+L I A++E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 647 DDQFLKICLAKDEGLLAIDICIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQR 706
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDE 455
L ++ AL+ FL P M KE ++ + AK +++ + L N + V PY R D + D+
Sbjct: 707 TLAIERALNQFLYPQMAKELKNKLLVEAKDFVIKACNRKLNNWLKVAPY-RPDQQVEEDD 765
Query: 456 E-------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVR--DQQS 505
+ RVL + + F +++ GEV D L T R R D++
Sbjct: 766 DFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREDDREK 825
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
K D E L KF++ +PHVV + N L +D+ I H + G ++ + +
Sbjct: 826 KAQDIETLKKFLLSKKPHVVTIAGENRDAQMLMEDVKRIA------HELEQGQQLSSIGV 879
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVA 598
D L LY NS+ S + +KR +A
Sbjct: 880 ELVDNELATLYMNSKKS------EVAYIKRVIA 906
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 118/199 (59%), Gaps = 8/199 (4%)
Query: 961 FKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDII 1020
+ +R+I HP F N+ +A K++ + + G+ IIRPSS+G ++LT+T KV +GV H D+
Sbjct: 900 YIKRVIAHPSFHNINFKQAEKMMESMDQGDVIIRPSSKGENHLTVTWKVCEGVSQHVDVR 959
Query: 1021 EGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GS 1077
E GK+ + +G TL I + FEDLDE+V RY+ P+ S + +LS++ ++ G
Sbjct: 960 EEGKE-----NAFSLGATLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCHGGD 1014
Query: 1078 KAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKR 1137
+ +++ELL K E PT I Y + PG F+L Y P EY+ + P+GF++R
Sbjct: 1015 RKKLEELLIKTKKEKPTFIPYFVCACRDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRNH 1074
Query: 1138 MFEDIDRLVAYFQRHIDDP 1156
+F ++ L +F+ H DP
Sbjct: 1075 IFPTVNGLFRWFKDHYQDP 1093
>gi|74182700|dbj|BAE34691.1| unnamed protein product [Mus musculus]
Length = 658
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 235/467 (50%), Gaps = 69/467 (14%)
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
A+E + + P+ LK LD +E +R+ +K TLY IR EL ++D R Y+ P+ +
Sbjct: 20 ALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTE 79
Query: 831 EEFYMISGETEDTLAEGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY- 879
E F M++ ET +T G+++ V RR QG+ +AI E+GL ++++
Sbjct: 80 EIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFP 139
Query: 880 --SDDWRDSE---------------------------LSDKLHE--------GDILTCKI 902
S+ W + LSDK+ + G + C+I
Sbjct: 140 ELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRI 199
Query: 903 KSIQKNRYQVFLVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKH 960
I ++ L CR S++ RNN ++ + D YY + + +QE+ K K+ +
Sbjct: 200 MKIDIEKFSADLTCRTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTY 257
Query: 961 FKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDII 1020
K R+I HP F N+ +A K++ + G+ IIRPSS+G ++LT+T KV G+Y H D+
Sbjct: 258 IK-RVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSAGIYQHVDVR 316
Query: 1021 EGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GS 1077
E GK++ +G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G
Sbjct: 317 EEGKENA-----FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGD 371
Query: 1078 KAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKR 1137
+ +++ELL K E PT I Y E PG F+L Y P EY+ + P+GF++R +
Sbjct: 372 RKKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQ 431
Query: 1138 MFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
+F ++ L +F+ H DP PS + R+PA+ +T +
Sbjct: 432 IFPTVNGLFRWFKDHYQDPVPGITPSSSNRT-----RTPASINATPA 473
>gi|321462549|gb|EFX73571.1| hypothetical protein DAPPUDRAFT_10851 [Daphnia pulex]
Length = 519
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 257/535 (48%), Gaps = 27/535 (5%)
Query: 216 YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGD--ELEDPKETPEE---MASNFKCAMF 270
Y C++AGL+ + K+ S EQL E M D +L TP E A +
Sbjct: 1 YYLCARAGLYGLLKKYALSPEQLA-----ENMRDNYQLHKVDHTPTEPLVAAVEYVSPEL 55
Query: 271 NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVK 330
++ VL+ A +M AV+I+ EP V + VR F + A + PT G ID H +K
Sbjct: 56 QTASEVLKAANYMLAVQIAKEPLVLQCVRESFFERARIDVIPTEKGWKEIDENHNLYPIK 115
Query: 331 WLREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSDGVSKSA 388
++++KP+ D Q+L + AE++KLL + K+ + K + + V K
Sbjct: 116 FVKDKPVSDLVDDQFLRLWVAEQDKLLTIVFQTKIEGAKTASYVDEIKALFTQNRVRKYV 175
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ WN I+ A+ F+ P++VKE ++ + A+ ++ + L+N ++V PY+
Sbjct: 176 EEWNILHNEIIDLAISKFVFPALVKELKAKLLNEAQKFVKRACCQQLYNWLNVAPYEVNF 235
Query: 449 NDITP-DEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
D + E RVL +G K +++ GE + + + + +N K
Sbjct: 236 GDKKGWETENGTRVLGLSFG-AKKAVFGCLINGDGERSNQIHLKHILAKLKNAE----KV 290
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
ND +++ F+ ++PH + + + T L ++ II ++VE+ ++ +++
Sbjct: 291 NDLKKIKNFISKYKPHAIAVSCESKKATKLVKNLRAIIAELVED------EKLPTINVEL 344
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
D SL +++ S + + P + A+ + R LQ+PL + LC +IL K P
Sbjct: 345 VDNSLAKVFAKSTRAKTEFPRHLLYCE-AIIIARVLQDPLIAYSQLCNADEDILKLKYHP 403
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
L+ L+ +E + V V+ TN++G+DIN AIH +QFI GLGP KA +L ++L
Sbjct: 404 LQEQLSKEELLEGLYLVFVNRTNELGVDINRAIHHPHTANVVQFICGLGPIKAEALIQTL 463
Query: 688 VR-AGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIH 741
+ + R T +G KVF N GF+++ ++ +++L D R+H
Sbjct: 464 QQNHQQLENRSQLETNCHMGPKVFENCAGFIKIGKTSLGDGVESSVEVL-DARVH 517
>gi|240279322|gb|EER42827.1| transcription elongation factor spt6 [Ajellomyces capsulatus H143]
Length = 730
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 180/693 (25%), Positives = 310/693 (44%), Gaps = 64/693 (9%)
Query: 225 WEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMA 284
+ + FG +++ E EDP E P+ MA NF F + L+ A+ M
Sbjct: 55 YGLVRAFGITADAFAQNALKEGKRQYTEDPAEQPDVMADNFVDENFTNGGHALRAAKAMF 114
Query: 285 AVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ 344
A E++ P +RK +R F N V+ T G ID H + K+LR + L
Sbjct: 115 AEELTMSPKMRKVMRQAFYMNGVIECFRTEKGLKKIDEQHPYYEFKYLRNQQLSDIARRP 174
Query: 345 WLLIQ--KAEEEKLLQVTIKLP--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK 400
L ++ KAEEE L++V ++ E+ L+S + SD S+ A WN +R ++
Sbjct: 175 ELFLRMLKAEEEGLVEVKVRFQNFENFKKSLYSQIE----SDNFSELADAWNRERREVVD 230
Query: 401 DALDNF--LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
AL ++ VKE + ++ ++ E +A ++ PY+ K +
Sbjct: 231 MALGKLDRIMSRGVKEN---IRTECENHVVKECREAFSLRLDQAPYKPKGMILG----TI 283
Query: 459 PRVLACCWG---PGKPETTFVMLDSSGEV------VDVLFTGCLTLRSQNVRDQQSKKND 509
PRVLA G GK + ++ G V VD+ + S + D
Sbjct: 284 PRVLALSNGNGVVGKDPIYWAWIEEDGRVLENGKFVDLSLGDSGRMVSDGI--------D 335
Query: 510 QERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII-------FKMVEEHPRDVGHEMDE 562
++ + +P V+ + + L + +++ E+ +V D
Sbjct: 336 VAAFVELVDRRKPDVIGVAGFSPETRKLYKQLVDLVSSKDLRSATYTNEYDEEVS---DH 392
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILS 622
L +V ++ + RLY+ S + + PG VAL +YLQNP+ A+L GR+I+S
Sbjct: 393 LEVVIVNDEVARLYQTSERAKMEHPGFATLTHYCVALAKYLQNPMKEYASL---GRDIVS 449
Query: 623 WKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAAS 682
+ P + + D+ +E +VD+ N G+DIN A+ L ++ GLGPRKAA
Sbjct: 450 IQFKPGQQLVPEDKILKQLETALVDMVNLCGVDINEAVTDIATANLLPYVCGLGPRKAAQ 509
Query: 683 LQRSL-VRAGAIFTRKDFVTAH----GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
L + + + G + R + + + +G KV+ N FL + S+ D LD+
Sbjct: 510 LLKIINMNGGIVNNRMELLGVNAQYPAMGVKVWNNCASFLYIDYD----STDPDADYLDN 565
Query: 738 TRIHPESYGLAQELAKEVYNRDIEGDLNDDED-------ALEMAIEHVRDRPDLLKTYLL 790
TR+HPE Y + +++A + D E D+ + D ++ E +DR + L
Sbjct: 566 TRVHPEDYDIGRKMAADALELD-EEDIKAETDENGQGAIIRKLIKEDAQDRVNDLILEEY 624
Query: 791 DRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
+++ + KR TL IR EL +++ R Q+ S D F M++GET ++LAEG VV
Sbjct: 625 AEQLEKNLNQRKRATLETIRAELQQPYEELRKQFAFLSTDAIFIMLTGETTESLAEGMVV 684
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDW 883
+++RV L+ G+ + + + +D +
Sbjct: 685 PISIKRVSDDHIDGKLDCGIDAIAGEVEITDRY 717
>gi|149053510|gb|EDM05327.1| rCG34692 [Rattus norvegicus]
Length = 447
Score = 189 bits (481), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 236/458 (51%), Gaps = 68/458 (14%)
Query: 711 VNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA 770
+N GFL++ + S+ +I++LD +R+HPE+Y A+++A + +E D + ++
Sbjct: 1 MNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDAN 56
Query: 771 LEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEP 827
A+E + + P+ LK LD +E +R+ +K TLY IR EL ++D R Y+ P
Sbjct: 57 PAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSP 116
Query: 828 SQDEEFYMISGETEDTLAEGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKE 877
+ +E F M++ ET +T G+++ V RR QG+ +AI E+GL ++
Sbjct: 117 NTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQD 176
Query: 878 DY---SDDWRDSE---------------------------LSDKLHE--------GDILT 899
++ S+ W + LSDK+ + G +
Sbjct: 177 NFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVH 236
Query: 900 CKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELA 957
C+I I ++ L CR S++ RNN ++ + D YY + + +QE+ K K+
Sbjct: 237 CRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQR 294
Query: 958 KKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHK 1017
+ K R+I HP F N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H
Sbjct: 295 TTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHV 353
Query: 1018 DIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK-- 1075
D+ E GK++ +G TL I + FEDLDE+V RY+ P+ S + +L+++ ++
Sbjct: 354 DVREEGKENA-----FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCS 408
Query: 1076 -GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFIL 1112
G + +++ELL K E PT I Y E PG F+L
Sbjct: 409 GGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFLL 446
>gi|355722679|gb|AES07651.1| suppressor of Ty 6-like protein [Mustela putorius furo]
Length = 892
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 160/609 (26%), Positives = 258/609 (42%), Gaps = 97/609 (15%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRL 575
D L L
Sbjct: 884 LVDNELAIL 892
>gi|422295585|gb|EKU22884.1| transcription elongation factor spt6 [Nannochloropsis gaditana
CCMP526]
Length = 1226
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 261/1105 (23%), Positives = 463/1105 (41%), Gaps = 199/1105 (18%)
Query: 169 DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSC-SKAGLWEV 227
DS L+A+ E V D LH G +G + + Y C S GL
Sbjct: 142 DSYRTMLDASREEEGVRD------LHEYLGVIGQETSRRAHRLAFDLYRKCRSLKGLRRF 195
Query: 228 ASKFGYSSEQLGLQLSLEKM-GDELED--------PKETPEEMASNFKCAMFNSSQAVLQ 278
AS F + +LG L G +L++ P PE A+ + + VL+
Sbjct: 196 ASLFSCPAPELGAALHASSTSGGDLDEQHRPLIPTPNMYPENAAAEYTTPSLPKYEEVLR 255
Query: 279 GARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAI-DSFHQFAGVKWLREKPL 337
A+HM A+E++ EP +R R I+ A ++T PT G + I D FH+ G +++ +KPL
Sbjct: 256 AAKHMLAMELAHEPRLRACFRQIYRAEATLTTHPTLKGHNEITDQFHRLHGFQFINKKPL 315
Query: 338 RKF----EDAQ---WLLIQKAEEEKLLQVTIKLPED-----------------SLNKLFS 373
+F D+Q +L I +AE E + TI P + SL +
Sbjct: 316 YEFLQPPSDSQPDLFLRIMQAEREGFITFTIDAPANTAAESTSWTPNGSSAWPSLLQTLE 375
Query: 374 DCKEHYLSDGVSKS-AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
Y + + S WN+QR+ IL L + +LP + E + M+ +A+ ++
Sbjct: 376 GLYMPYRTASLDTSLVDAWNEQRKDILSLTLSSHILPMLEAEVKREMARKAQEAVVAAAA 435
Query: 433 KALWNKVSVGPY-----------------------QRKDNDITPDEEAAPRVLACCWGPG 469
AL V+ G Y QR ++TP ++ V+A
Sbjct: 436 DALREVVNTGTYMPQYRNINCALIPPFEDFQLRLSQRFPFELTPLSSSSLEVVAVFQASS 495
Query: 470 KPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG 528
+ E +F V + G V D + L DQ+ K L K +++ +P VVV+
Sbjct: 496 RQEASFAVSVGRDGAVRDYVMLPPLRSGYDGDADQRDK------LQKIIVEAKPAVVVVN 549
Query: 529 AVNLSCTSLKDDIYEIIFKMVEEHPRDVGH-EM--------DELSIVYGDESLPRLYENS 579
AV +L+ + E + K+V+ R H E+ + ++ D+ L +Y S
Sbjct: 550 AVVGGYEALR--MKERLAKVVDNVARLYQHGELAAEDEEGWEPCEVLLIDDHLASVYARS 607
Query: 580 RISSDQLPGQKGNVKRAVALGRY--------------------------LQNPLAMVATL 613
+ N++ A+ + R LQ+PLA+V +
Sbjct: 608 PRVKKEFTDYHDNLRIAIGMARQMQVRIPAPPFPSYLPPFTCLSPFFYPLQDPLALVTLI 667
Query: 614 CGP-----------GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHR 662
G ++ L L++ + P E E+V+VD N VG+D+N +I
Sbjct: 668 YAAQDPRGGRFGGPGYQLSYLSLHDLQDQVNPHELSRRWEEVLVDAVNDVGVDLNKSISS 727
Query: 663 EWQFAPLQFISGLGPRKAASLQRSL--VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVR 720
L F+SGLG RKA +L+ ++ + +R + L KV+ NA GFLR+R
Sbjct: 728 LHLAGLLPFVSGLGFRKANALRAAIRNTHGSLVVSRAQLIEEGLLTPKVYENAAGFLRIR 787
Query: 721 -------------------------------RSGQAASSSQFIDLLDDTRIHPESYGLAQ 749
+ + ++LLD+TRIHPE Y +
Sbjct: 788 VPHLMGEDGVEEEDAMDLYEEEGSRRRGRKKKGRGEGRGERKVNLLDNTRIHPECYLTHE 847
Query: 750 ELAKEVYNRDIEGD----LND-----DEDALEMAIEH---------------VRDRPDLL 785
+ K + + + D +N+ +D+ ++ + V + PD L
Sbjct: 848 WVGKVIRDAMEQADPTMGINELVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDEL 907
Query: 786 KTYLLDR---HIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETED 842
+ L+ +++ + + I++EL F+D R ++ S+D+ F ++SGET+
Sbjct: 908 ASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDA 967
Query: 843 TLAEGRVVQATVRRVQGQRAICVLESGLA-GMLMKEDYSDDWRDSELSDKLHEGDILTCK 901
TL G V V +V A L+ + G L + Y + RD + + +
Sbjct: 968 TLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDMDFEAMVPVDTPVEGV 1027
Query: 902 IKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP---YYHEERSSRQSEQEKARKEKE--L 956
+ I+K+R V + C ++ + +L P ++ E R+ ++ E+ + + E++ L
Sbjct: 1028 VTEIEKSRISVRISCLAEDLTARDWPRPPSLPPLDRHFDEARALKEYEERRRKIEEKVRL 1087
Query: 957 AKK-----HFKERLIVHPCFQNVTADEAMKLLSAK-EPGESIIRPSSRGPSYLTLTLKVY 1010
AK+ ++R + ++ V EA K+L + + GE + RPS G ++L+
Sbjct: 1088 AKEGKLRLSRRQRKVDDERWRTVNHLEAEKVLKQQGKVGEWLFRPSGSGS--ISLSWLAL 1145
Query: 1011 DGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSY 1070
+ + H + E K+ D +GK L + +++LD++V +YI P+ + ++ S+
Sbjct: 1146 EDLVLHIPVKEEEKEAGD-----AVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSH 1200
Query: 1071 RKFRKGSKAEVDELLRIEKAEFPTR 1095
RKFR+ +K +V+ LR K + P++
Sbjct: 1201 RKFRRMAKEQVEAELRASKKKHPSQ 1225
>gi|326478536|gb|EGE02546.1| transcription elongation factor spt6 [Trichophyton equinum CBS
127.97]
Length = 1261
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 260/524 (49%), Gaps = 28/524 (5%)
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDF 699
+E +VD+ N VG+DIN A+ L +ISGLGPRKA+ L + + + G + +R +
Sbjct: 737 LETALVDMVNLVGVDINEAVSDVSTANLLTYISGLGPRKASQLLKVINMNGGVVNSRMEL 796
Query: 700 VTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK-- 753
+ + +G KV+ N FL + + D LD+TR+HPE Y + +++A
Sbjct: 797 LGVNAQYPAMGVKVWNNCASFLYIDYDNADPDT----DYLDNTRVHPEDYDIGRKIAADA 852
Query: 754 -EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLI 809
E+ DI+ + +++ + D D + LL+ + ++ + KR TL I
Sbjct: 853 LELDEEDIKAETDENGQGAIVRKLIKEDAQDKVNDLLLEEYAEQLENNLNQRKRATLETI 912
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
R EL +++ R Q+ D F M +GET ++LA+G +V T++RV L+ G
Sbjct: 913 RAELQQPYEELRKQFVFLGTDAIFTMFTGETAESLAQGMIVPITIKRVSDDHIDGKLDCG 972
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
+ ++ + + +D + D + KI + + + + RE ++ N Y+
Sbjct: 973 IDALVPESEMTDRY-DIPIRSLYAPHQTTLAKITYLNRKSFVANVSLREDQV-NKPYR-- 1028
Query: 930 QNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPG 989
+ LD E ++ E ++A KEK + R+I HP F+ +A + L+ + G
Sbjct: 1029 RQLDHMRGEWDEDQEREDQEAMKEKTQTDQR-ALRVIKHPLFRPFNGRQAEEFLAPQSRG 1087
Query: 990 ESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFED 1048
+ +IRPSS+G +L +T KV DGVY H D++E KD++ +G+ LKI G+ ++ D
Sbjct: 1088 DVVIRPSSKGHDHLAVTWKVADGVYQHIDVLELDKDNE-----FTVGRILKIGGKYSYTD 1142
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPG 1108
LDE++ ++ + + M + K++ G+K + L P R Y F + +HPG
Sbjct: 1143 LDELIVNHVKAMAKKVDDMTVHEKYQSGTKEATEGWLTTYTTANPKRSAYAFCLDTKHPG 1202
Query: 1109 TFILTYIRSTN-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
F L + P + + + + P+G++ ++ + D+ L F+
Sbjct: 1203 YFHLCFKAGLKAPLNSWPVKVIPQGYELQRTPYPDMRALCNGFK 1246
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 192/466 (41%), Gaps = 50/466 (10%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R E ++++ L+ + ++PFI
Sbjct: 290 EQFREEAVWISN------LMLLKKRLDSDLHEPFQRAVAK-----VLEFMVTDDWEVPFI 338
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + +K + N D L LW I + D K+ L +++
Sbjct: 339 FQHRKDYLIHAVKIPIPDGGTNPDGGKYIVEAEKLLSMIDLWDIFEYDLKFRALIDKRNT 398
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD--LKFNLHFPP 197
LQ+ Y +T + ++F+ + L AA T E+ DV L F
Sbjct: 399 LQTTYDNL----------QTISNVKDEMFEEM---LPAAITMEELQDVQDYLYFQYSIEL 445
Query: 198 GEVGV----DEGQ----YKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
++ + EG+ +R K STK + + + + FG + + +
Sbjct: 446 KDIALATTNHEGENGTAAQRRKASTKTFFERVRNSRAYGLVRAFGITPDAFAQNVMETGR 505
Query: 248 GDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
++D E P +MA N + F++ ++ AR M A E++ P VRK +R F + V
Sbjct: 506 RQYIDDASEKPTDMADNLLDSSFSNGAHAMKAARTMFAEELTMSPRVRKVMRQAFYMSGV 565
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKLPE 365
+ T G ID H + K+LR++ + L ++ KAEEE L+ + + +
Sbjct: 566 IECYRTEKGLKKIDEHHPYYEFKYLRDQQISDIARRPELFLRMLKAEEEGLVDIKVHFKD 625
Query: 366 -DSLNK-LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
D+ K L+ + + SD S+ A WN +R+ +L AL L M K + +
Sbjct: 626 FDNFKKRLYPEIQ----SDNSSEVADAWNKERKDVLDLALSK-LEKIMSKGVKENIRSEC 680
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG 469
++ + E + ++ PY+ K + PRVLA G G
Sbjct: 681 ENHVARECREVFSTRLDQAPYKPKGMILG----TIPRVLALTNGSG 722
>gi|159479150|ref|XP_001697661.1| glycine rich protein [Chlamydomonas reinhardtii]
gi|158274271|gb|EDP00055.1| glycine rich protein [Chlamydomonas reinhardtii]
Length = 1032
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 217/450 (48%), Gaps = 46/450 (10%)
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL-IQK 350
P + Y + AVVS T G++ +D FH++A LR+K L F + L + +
Sbjct: 263 PIISSYSPESLVSAAVVSAEATEAGEAVLDPFHKYALATRLRKKRLADFGSSDLFLRLDE 322
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPS 410
A E+L + + L + KL +D E + S AQ WN R ++K AL+ LLP+
Sbjct: 323 AARERLASLRLHLESAAAEKLVNDVAELFQSSDRGAVAQQWNGLRRDVVKAALEEQLLPA 382
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG--- 467
+ + A+ L R +++ A+PR+ C+G
Sbjct: 383 FRAHFHAKLLAEAREHAL-----------------RLEDEFL----ASPRLCIVCYGNQE 421
Query: 468 ----PGKPE-TTFVMLDSSGEVVDVLFTGCLTLR-------SQNVRDQQSKKNDQERLLK 515
G+P T V L+ G + D F G L+ + + V +K D R+ +
Sbjct: 422 LNPATGQPNNTAVVFLNELGNLTDFFFAGQLSGQIRRSGQGAGAVFTDPAKSKDAARIRE 481
Query: 516 FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD-VGHEMDELSIVYGDESLPR 574
+++H PH V++G +C L +D+ I+ ++E H + HE +++ DE L
Sbjct: 482 KLLEHLPHAVLVGIAAPACRQLHEDMRNIVDSLLEHHADALIDHETRGITVFPMDEKLAA 541
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
L+E S +L V+RAV LGR +PL+++A LCGP +E+LS + +++ L
Sbjct: 542 LWEVSAAGRSELREHAPLVRRAVGLGRSALDPLSLLAALCGPDKEVLSLGVYDMQDALGK 601
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA----ASLQRSLVRA 690
D++ + +VMV QVG+D+NLA + W+ LQF+ GLGPRKA A+LQR+ +A
Sbjct: 602 DDRMAAVTRVMVTAGAQVGVDVNLACNVAWRSELLQFVPGLGPRKAGALLAALQRNRNKA 661
Query: 691 GA-IFTRKDFVTAHGLGKKVFVNAVGFLRV 719
+ KD LGK VF N +LR+
Sbjct: 662 ESRSMLYKDLGV---LGKVVFRNCGAYLRI 688
Score = 43.9 bits (102), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 31/221 (14%)
Query: 863 ICVLESGLAGMLMKEDYS---------DDWRDSELS--DKLHEGDILTCKIKSIQK---N 908
+ ++ SG GM+ E+ S +W+ S + + G I+ + + Q
Sbjct: 752 VILINSGTEGMVPAEEVSGSYTGRVGGPEWQAVMQSRLNSVARGRIIRIEEQPDQSGSGT 811
Query: 909 RYQVFLVCRESEMRNN----RYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKER 964
R+ V L + S + + ++C + +P Y + + + +A + ++ R
Sbjct: 812 RFMVVLSTKSSVVNDEGGEYERKYCASREPNYVVREKTEATAKRRADEAGRSREQTVLVR 871
Query: 965 LIVHPCFQNVTADEAMKLLSAKE--PGESIIRPS-SRGPSYLTLTLKVYD----GVYA-- 1015
I HP F+N++ +A+ L+ KE G +I+RPS R P+ L +T+K+ V+A
Sbjct: 872 PIRHPMFKNISQLDAVHALAPKEVPVGSAILRPSYRRNPNELDVTIKIAQLAAGPVFAVT 931
Query: 1016 ---HKDIIEGGKDHKDIKSLVGIGKT-LKIGEDTFEDLDEV 1052
D +G H + I + +G +EDLD++
Sbjct: 932 FLRESDKPQGRAAHLTLAPPFTIDASHCGLGNLVYEDLDQM 972
>gi|52353478|gb|AAU44044.1| unknown protein [Oryza sativa Japonica Group]
Length = 273
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 99/109 (90%)
Query: 1067 MLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIG 1126
ML YRKF+KGSK+EVDE+LR EK+E P RIVY FGISHEHPGTFIL+YIRSTNPHHEYIG
Sbjct: 1 MLLYRKFKKGSKSEVDEMLRAEKSENPMRIVYCFGISHEHPGTFILSYIRSTNPHHEYIG 60
Query: 1127 LYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRS 1175
LYPKGF+FRKR F++IDRLV+YFQ+HID P D+ PS+R+VAAMVPM+S
Sbjct: 61 LYPKGFRFRKRDFDNIDRLVSYFQKHIDKPPPDAGPSMRNVAAMVPMKS 109
>gi|149053511|gb|EDM05328.1| rCG33799 [Rattus norvegicus]
Length = 886
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 156/599 (26%), Positives = 254/599 (42%), Gaps = 97/599 (16%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 318 WIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIKEALGFMRNQHFEVPFIAF 377
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 378 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 414
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 415 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 469
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 470 YGRDIPKMQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 529
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 530 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 589
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 590 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 649
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 650 DQFLKIGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 709
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + A+ ++ + L+N + V PY R D + D++
Sbjct: 710 MAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPY-RPDQQVEEDDD 768
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 769 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 828
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 829 AQDIETLKKFLVNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGV 881
>gi|359494957|ref|XP_003634883.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase, chloroplastic-like
[Vitis vinifera]
Length = 726
Score = 172 bits (437), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 95/120 (79%), Gaps = 3/120 (2%)
Query: 1074 RKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK 1133
R+G +AEVD+LLR EK+++P RIVY FGI HEHP FIL+YI +TNPHHEYIGLYPKGFK
Sbjct: 594 RRGKRAEVDDLLRAEKSDYPMRIVYYFGICHEHPSAFILSYIINTNPHHEYIGLYPKGFK 653
Query: 1134 FRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGST 1193
FRK F++I+RLV YFQ+HI+DP + APSI+SVA MVPMRSP A G+GW +T
Sbjct: 654 FRKHTFDNIERLVPYFQKHINDPWPEQAPSIQSVATMVPMRSPV---VRAPTGNGWENNT 710
>gi|118404546|ref|NP_001072665.1| suppressor of Ty 6 homolog isoform 1 [Xenopus (Silurana) tropicalis]
gi|115313457|gb|AAI23964.1| Spt6 gene product [Xenopus (Silurana) tropicalis]
Length = 519
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 167/300 (55%), Gaps = 18/300 (6%)
Query: 890 DKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQ 947
+++ G + C+I I ++ V L CR S++ +NN ++ + D YY + S +Q
Sbjct: 39 ERVKVGMTVHCRIMKINIEKFSVDLTCRTSDLMDKNNEWKLPK--DTYYDFDTESADHKQ 96
Query: 948 EKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTL 1007
E+ K+K+ + K R+I HP F N+ +A K++ + G+ IIRPSS+G ++LT+T
Sbjct: 97 EEEFKKKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTW 155
Query: 1008 KVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAM 1067
KV +G+Y H D+ E GK+ + +G TL I + FEDLDE++ R++ P+ S + +
Sbjct: 156 KVCEGIYQHVDVREEGKE-----NAFSLGSTLWINNEEFEDLDEIIARFVQPMASFARDL 210
Query: 1068 LSYRKFR---KGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEY 1124
++++ F+ G K +++ELL K E PT I Y E PG F+L Y P EY
Sbjct: 211 INHKYFQDCNNGEKKKLEELLIKTKKEKPTFIPYYISACKELPGKFLLGYQPRAKPRVEY 270
Query: 1125 IGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
+ + P+GF++R ++F ++ L +F+ H DP PS S R+PA+ +T +
Sbjct: 271 VTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT-----RTPASVNATPA 325
>gi|49256399|gb|AAH73963.1| SUPT6H protein [Homo sapiens]
Length = 545
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 175/324 (54%), Gaps = 19/324 (5%)
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM--RN 923
L++G+ G + + SD +++ G + C+I I ++ L CR S++ RN
Sbjct: 51 LDNGVTGFIPTKFLSDKVVKRP-EERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRN 109
Query: 924 NRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLL 983
N ++ + D YY + + +QE+ K K+ + K R+I HP F N+ +A K++
Sbjct: 110 NEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMM 166
Query: 984 SAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGE 1043
+ G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I
Sbjct: 167 ETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINS 221
Query: 1044 DTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGF 1100
+ FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y
Sbjct: 222 EEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFI 281
Query: 1101 GISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDS 1160
E PG F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP
Sbjct: 282 CACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGI 341
Query: 1161 APSIRSVAAMVPMRSPANGGSTAS 1184
PS S R+PA+ +T +
Sbjct: 342 TPSSSSRT-----RTPASINATPA 360
>gi|123456284|ref|XP_001315879.1| SH2 domain containing protein [Trichomonas vaginalis G3]
gi|121898569|gb|EAY03656.1| SH2 domain containing protein [Trichomonas vaginalis G3]
Length = 1360
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 239/1036 (23%), Positives = 436/1036 (42%), Gaps = 158/1036 (15%)
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPE--------EMASNFKCAMFNSSQAVLQGAR 281
KF YS LSL ++ +P+ P+ E+++N+ ++F + + + +
Sbjct: 326 KFIYSPMDFVHILSLNSSLNDPPEPQTDPQQALQSWHDELSTNYP-SVFPNIEVMTRQMV 384
Query: 282 HMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG--DSAIDSFHQFAGVKWLREKPLRK 339
AA +++ P +R+ F + V++T PT G S + ++ +K L+ KP+
Sbjct: 385 GFAAKQLATHPLFIDMLRTRFSPHIVINTQPTTSGAKSSMMYPKGKYGSIKRLKNKPIIS 444
Query: 340 FEDA-QWLLIQKAEEEKLLQVTI---KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQR 395
F +WLLI +A + L TI K + + ++ + + Y SD W+ R
Sbjct: 445 FNKTDKWLLIVEAFQSGNLTYTIDTDKGIDKEIEEISTKYRMRYPSD--------WDSLR 496
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDE 455
+ IL+ A+ +F+ P +VKE + A+ ++ E L++ ++ PY + P
Sbjct: 497 KDILQMAIKDFIWPQIVKETEDELKKNAEKFVCNEIETRLFSHLTSPPYTQLSTS-QPYI 555
Query: 456 EAAPRVLACCWGP--GKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVR-----DQQSKK- 507
+ ++LA + K + M++ G ++D L+ + S+ + D+Q K+
Sbjct: 556 LKSQKILAMHYTSDDTKRKIYAAMVNEKGNIIDSLYLHSKIIDSKVIVNWDDPDKQIKEG 615
Query: 508 -------NDQE------RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
ND E L+KF+ H P V+ + A L SL I E++ H R
Sbjct: 616 SANNLAANDLEVIKSKVALVKFIETHHPPVIAITASCLKSASLVHAIVELV------HSR 669
Query: 555 DVGHEMDELSIVYGDESLPRLYENSR----ISSDQLPGQK----GNVKRAVALGRYLQNP 606
+ E + ++ LY +SR +LP K A + R +QNP
Sbjct: 670 -IQPESNRPRVLLAPVEHAILYAHSRDCCKAELHELPKDKRADGAEFLIAASTARRMQNP 728
Query: 607 LAMVATLCGPGREILS-WKLCPLENFLTPDEKYG-----MIEQVMVDVTNQVGLDINLAI 660
+A + L P + L+ W + P ++ + + IE+ + G+D+ AI
Sbjct: 729 MAELCRLITPKKNHLTDWAMTPFQSVFSGNNDNTSPVAQAIERACLRAIALTGVDMTAAI 788
Query: 661 HREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTA-HGLGKKVFVNAVGFLRV 719
+ +QFI GLGP A + + + I R +A H V NA+ F+R
Sbjct: 789 SNPNLRSTVQFIPGLGPHTAEKII-DIAQKDNIKQRSKLRSALHEFDDMVVKNALPFIRF 847
Query: 720 RRSGQAASSSQFID--LLDDTRIHPESYGLAQELAKEVY--NRDIEGDL-------NDDE 768
+ D LD T I + Y A ++ K + ++ IE ++ + D
Sbjct: 848 PMENKLNDDHSLEDNNYLDGTLIPMDEYNTAMDILKRGFFESQYIETNIIELFSRTSKDT 907
Query: 769 DALE-----MAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETL----------------- 806
D E +A+ H + P L I ++ R ETL
Sbjct: 908 DITEPVKRYVAVSHSNNEP-------LIEFIAQQLRLGPYETLRYPAVDWDAPKPNPKSP 960
Query: 807 ---YLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG-----RVVQATVRRVQ 858
Y R +H D N Y+ S E F ++ + +T+ E R+V+ R+Q
Sbjct: 961 LEKYQSDRLAVHD--DENNYYRCMSDHEVFEALTSASTETIQENVITAIRIVKIDTNRMQ 1018
Query: 859 --------GQRAICV---------LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCK 901
G RA C L L + D D + EL + H+ I
Sbjct: 1019 VIVGEHSSGIRAFCTQDVANNVQYLRKTLDTNIDSFDGRDTSSERELINTTHDAVITRVD 1078
Query: 902 IKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKH- 960
+ + VC +++ + ++ +E S + +++AR E A+K+
Sbjct: 1079 ESMVSID------VCYITDI----IEKAKDYHRLITDEDSFDFAGEDEARAEALSAEKNM 1128
Query: 961 ---FKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHK 1017
++ R I H F+ VT +A LS + G I RPSS+G +++LT+ + + A+
Sbjct: 1129 IVTYQPRSINHKNFKQVTMAQAEAELSNQSVGSFIFRPSSKGNEHISLTILFPNNICANY 1188
Query: 1018 DIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGS 1077
DI+E K +S+ +GK L I + F DL+E+ ++I P+ + L+ ++ + K+ +
Sbjct: 1189 DIVEQNK-----QSVDAVGKDLFIRDQKFSDLEEIKWKFIYPIKTQLENIMKHEKWVEDP 1243
Query: 1078 KAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHH--EYIGLYPKGFKFR 1135
++ +E++ EKA+ +VY S ++ G L + T H E I L+ +R
Sbjct: 1244 -SQANEIITEEKAKNENMLVYRITTSIQNKGYLELVW-EGTKDHRVVEPIRLFGDKIFYR 1301
Query: 1136 KRMFEDIDRLVAYFQR 1151
++ + DI L+ +F++
Sbjct: 1302 QQQYNDIRSLILFFKK 1317
>gi|327200637|pdb|3PSF|A Chain A, Crystal Structure Of The Spt6 Core Domain From
Saccharomyces Cerevisiae, Form Spt6(236-1259)
Length = 1030
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 187/852 (21%), Positives = 360/852 (42%), Gaps = 83/852 (9%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ I + + + L++PFI YR+ N +++ D F
Sbjct: 135 NYDLTEFKEAIGNAIKFITKENLEVPFIYAYRR------------NYISSREKDGF---- 178
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
L LW I LD ++ L +K +Q +Y + + ++ + + + +
Sbjct: 179 -LLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDP---------IVTEYFKNQNT 228
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEG--QYKRPKRSTKYSSCSKAGLWEVASK 230
S+ + +++ D L+F E+ ++ K+ +++ Y + L++ S
Sbjct: 229 ASIAELNSLQDIYDY-LEFKYANEINEMFINHTGKTGKKHLKNSSYEKFKASPLYQAVSD 287
Query: 231 FGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGARH 282
G S+E +G +S + ++ ++ P P E+ + A +F S ++ + +
Sbjct: 288 IGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNANSGDLQVFTSNTKLAIDTVQK 347
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
++E+S +R+ VRS F + T G I + +K+ + F
Sbjct: 348 YYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRR 407
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+ ++ E E L +++KL S + LF E + S A WN+ R+L
Sbjct: 408 DPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALE---TTNTSDIAIEWNNFRKLA 464
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
A+D + + +E + ++ + + K+ P+ D
Sbjct: 465 FNQAMDK-IFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRD-----PKI 518
Query: 459 PRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER--- 512
P++L+ G G+ V ++ G+ + R + D K + E+
Sbjct: 519 PKILSLTCGQGRFGADAIIAVYVNRKGDFI----------RDYKIVDNPFDKTNPEKFED 568
Query: 513 -LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
L + QP+ + + N + E++ K R GH + I+Y ++
Sbjct: 569 TLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSR--GHT---IPIIYVEDE 623
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+ Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P +N
Sbjct: 624 VAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTS--EEVRSLSIHPHQNL 681
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +SL R
Sbjct: 682 LSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLN 741
Query: 692 -AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQ 749
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA
Sbjct: 742 EPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLAT 801
Query: 750 ELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKREN---K 802
++A + D + +E + IE +R+ PD L++ L+ + +E ++ K
Sbjct: 802 KVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRK 861
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
L I EL+ GF++ RN + DE F ++GE+E T +G ++ V R
Sbjct: 862 LNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHNDI 921
Query: 863 ICVLESGLAGML 874
IC S + ++
Sbjct: 922 ICTTNSEVECVV 933
>gi|449685226|ref|XP_002160684.2| PREDICTED: transcription elongation factor SPT6-like, partial
[Hydra magnipapillata]
Length = 919
Score = 169 bits (429), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 197/400 (49%), Gaps = 20/400 (5%)
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
++ + +I DN C D ID+ H A K+L+ KPLR Q+L + AE+E
Sbjct: 527 KRTLYTICKDNG---NCHFSDNKKEIDNNHPNAPFKYLKSKPLRDLHGEQFLKMWHAEQE 583
Query: 355 KLLQVTIKLPEDSLNKLFS---DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
L+++ I + ++ N+ FS + K+ Y D S Q WN QR L AL L P +
Sbjct: 584 NLVKMRIMIGQEQHNQGFSYLDEIKQLYHRDEFSLLVQEWNKQRSEALSLALSKMLYPML 643
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN---DITPDEEAA--PRVLACCW 466
KE ++ + + + + + L N +SV PYQ N + + D E++ RVL+C +
Sbjct: 644 EKELKAKLLRESIDFAIQACTRKLHNWISVAPYQPDSNQEGEYSTDNESSYGSRVLSCSF 703
Query: 467 GPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVR--DQQSKKNDQERLLKFMMDHQPH 523
P + +F MLD+ G+VVD L L R +V+ +Q +K +D +L F+ + P
Sbjct: 704 LPDRNAVSFFAMLDADGQVVDFLRLKYLLCRKNSVKKSEQDAKISDMNKLKDFIRKYSPR 763
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
VV + A + DDI E + ++ ++H +M + + + R+Y+NS
Sbjct: 764 VVAVAAECCEAQRVLDDITEAVQELEQDH------QMPHIYVELVPGEVARIYQNSPRGL 817
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQ 643
+ P ++ A++LGR +QNPL A LC E+ +L P+++ L D +E
Sbjct: 818 MEFPEYPELLRHAISLGRRIQNPLVEFAGLCNFEEELTCLRLHPMQDVLPTDLLQRRLEI 877
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
++ N G+DIN A+ QF+ GLGPRKA L
Sbjct: 878 EFINEVNLTGVDINRALDFPHMAVLTQFLCGLGPRKAGHL 917
>gi|167535690|ref|XP_001749518.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771910|gb|EDQ85569.1| predicted protein [Monosiga brevicollis MX1]
Length = 1839
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 178/728 (24%), Positives = 303/728 (41%), Gaps = 65/728 (8%)
Query: 76 DIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQK 135
++PFIA +RKE+ P++ + LW + + D+++ +L +
Sbjct: 502 EVPFIAHFRKEKV---------------------GFPSVLNYHDLWLVQEYDQRFHMLHE 540
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS-ISKSLEAAETEREVDDV------- 187
+ + L ++ R + + L D+ L +++ E+ DV
Sbjct: 541 QHARLIRQTDHLLKKLERDANAGSAPSHRATLIDNKFLNYLYGIKSDEEMKDVRAFLRFF 600
Query: 188 --DLKFNLHFPPGEVGVD---EGQYKRPKRST-KYSSCSKAGLWEVASKFGYSSEQL--- 238
DL L+ G D E R +R T +Y GL S FG + Q+
Sbjct: 601 YDDLLQELNTGSGSQSHDDQAETHASRQRRITSRYHHSESVGLTASMSCFGITLPQIVEN 660
Query: 239 ---GLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR 295
G QL E++ P E ++A C + + ++ +H A EI+ P VR
Sbjct: 661 ILNGFQLH------EVQAPAEDIFQVA--MSCPVNIDVEEIVNRLQHCLAREIAQHPAVR 712
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEK 355
+ R A+++ PT G ID + A ++L KP+ D +L + K +
Sbjct: 713 GHFRERIRRMALLTVRPTKKGFQLIDKWDVLAKYRFLTNKPVDTLNDDTFLWLIKGKRAG 772
Query: 356 LLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
LL+ + + + + ++ + A W I++D + + LL M++E
Sbjct: 773 LLEYSFAVSDHTATEIEQAILGALQFTVMDDMALKWKPHINAIVRDCVRDMLLVDMIEEV 832
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTF 475
++ A+ ++ + + N VS P+Q D + E RV AC G +
Sbjct: 833 EKKLTAEAELFVEEQCANFVRNFVSRAPFQ-PDFAVEEGREDGVRVTACILGDMGEASFL 891
Query: 476 VMLDSSGEVVDVLFTGCLTL--RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
V L+ G+VVD + L ++N RD Q +++D ER+ F++ + P V+V+GA
Sbjct: 892 VHLNGYGDVVDFIKLDNLGFSEHARNERDAQRRRDDNERIKNFLLLNVPDVLVVGADRQP 951
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
L +++ + EE + +S+ + + LY S S + ++
Sbjct: 952 ALHLHRTFGDMVRNIREE-----VEDFPPVSVELVETQVAELYARSVPSKKEFAEYHFSL 1006
Query: 594 KRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVG 653
A+ LGR +QNP M+ATL + L + PL+ F++ D + Q M N+
Sbjct: 1007 ITAIGLGRQVQNPELMMATLYNEDEDFLHISMHPLQEFISKDRLRTKLIQEMSVAVNRSC 1066
Query: 654 LDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFT-RKDFVTAHGLGKKVFVN 712
+D+ A + LQFI GLG KAA+L L F R+ GLG N
Sbjct: 1067 IDLVAAASKPQLANALQFICGLGKHKAAALLSHLRPTVREFHGRRQLADMEGLGPCTAYN 1126
Query: 713 AVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV--YNRDIEGDLNDDEDA 770
A FL V S Q LD+ IHPESY A ++ + Y+ I +DEDA
Sbjct: 1127 ASAFLIVHPSPDYDEPEQ-SSRLDELLIHPESYKYATKICMDAVGYSEHI----GEDEDA 1181
Query: 771 LEMAIEHV 778
++A E +
Sbjct: 1182 NQLANEAI 1189
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 14/212 (6%)
Query: 946 EQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTL 1005
E E+ K +E + R++ HP F N +AMK L G+ + RPSS+G + +T
Sbjct: 1458 EFEQKLKAEEAPALRYVPRVVNHPAFINADYSQAMKQLQNGHIGDVVFRPSSKGENLITC 1517
Query: 1006 TLKVYDGVYAHKDIIEGGKDHKDIKSL-------VGIGKTLKIGEDTFEDLDEVVDRYID 1058
+ K D AH I E +D SL V G+T + FEDLD+++ +YI
Sbjct: 1518 SWKTGDKQVAHTTIKEDEARKRDEYSLSDRLLLEVAPGRT-----EEFEDLDQIIAQYIS 1572
Query: 1059 PLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRST 1118
P+ ++ + ++R+F+ ++ E+ + EK + RI Y +S P + LTY+
Sbjct: 1573 PMADLIRRLHAHRRFKNVTREEMAADIVDEKRQNMNRIPY--YMSPAEPCRYWLTYVPKR 1630
Query: 1119 NPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ + I + G++ + F DID+L+ +F+
Sbjct: 1631 DALLQRIRITVDGYQLQSETFPDIDQLLTWFK 1662
>gi|432096067|gb|ELK26935.1| Transcription elongation factor SPT6 [Myotis davidii]
Length = 459
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 158/285 (55%), Gaps = 18/285 (6%)
Query: 905 IQKNRYQVFLVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFK 962
I ++ L CR S++ RNN ++ + D YY + + +QE+ K K+ + K
Sbjct: 3 IDIEKFSADLTCRTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK 60
Query: 963 ERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEG 1022
R+I HP F N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E
Sbjct: 61 -RVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREE 119
Query: 1023 GKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKA 1079
GK++ +G TL I + FEDLDE+V RY+ P+ S + +L+++ +++ G +
Sbjct: 120 GKENA-----FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQECSGGDRK 174
Query: 1080 EVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMF 1139
+++ELL K E PT I Y E PG F+L Y P EY+ + P+GF++R ++F
Sbjct: 175 KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIF 234
Query: 1140 EDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
++ L +F+ H DP PS S R+PA+ +T +
Sbjct: 235 PTVNGLFRWFKDHYQDPVPGITPSSSSRT-----RTPASINATPA 274
>gi|13277566|gb|AAH03692.1| Similar to suppressor of Ty (S.cerevisiae) 6 homolog, partial [Homo
sapiens]
Length = 448
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 154/276 (55%), Gaps = 18/276 (6%)
Query: 914 LVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCF 971
L CR S++ RNN ++ + D YY + + +QE+ K K+ + K R+I HP F
Sbjct: 1 LTCRTSDLMDRNNEWKLPK--DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSF 57
Query: 972 QNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKS 1031
N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 58 HNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA---- 113
Query: 1032 LVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIE 1088
+G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL
Sbjct: 114 -FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKT 172
Query: 1089 KAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAY 1148
K E PT I Y E PG F+L Y P EY+ + P+GF++R ++F ++ L +
Sbjct: 173 KKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRW 232
Query: 1149 FQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
F+ H DP PS S R+PA+ +T +
Sbjct: 233 FKDHYQDPVPGITPSSSSRT-----RTPASINATPA 263
>gi|56754873|gb|AAW25619.1| SJCHGC08796 protein [Schistosoma japonicum]
Length = 210
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 123/198 (62%), Gaps = 8/198 (4%)
Query: 961 FKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDII 1020
+ RLI HP F+N++ D+ + EPG IIRPS +G +LT++ K+ DG+ H D+
Sbjct: 11 YMSRLIFHPYFKNISYDQLAAMEPELEPGAIIIRPSRKGTDHLTVSWKIDDGIMQHIDVS 70
Query: 1021 EGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GS 1077
E K + +GK L IG++ FEDLDE+V R++ P+VS ++ +++Y+ +R G
Sbjct: 71 EKEKSNN-----FSLGKLLIIGDEEFEDLDEIVARHVQPMVSLVRDVMTYKYYRDSSGGD 125
Query: 1078 KAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKR 1137
+A ++ LL+ EK+ P RI Y + E PG FIL Y+ + NPH E + P+GFKFR+
Sbjct: 126 RAHLNALLQHEKSFNPDRIPYFLSSTKERPGYFILAYLPNKNPHFELFSVRPEGFKFRQL 185
Query: 1138 MFEDIDRLVAYFQRHIDD 1155
+F +DR++ +F+ H +D
Sbjct: 186 IFPTLDRMITWFKEHYND 203
>gi|302854316|ref|XP_002958667.1| hypothetical protein VOLCADRAFT_120010 [Volvox carteri f.
nagariensis]
gi|300255992|gb|EFJ40270.1| hypothetical protein VOLCADRAFT_120010 [Volvox carteri f.
nagariensis]
Length = 1427
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 171/664 (25%), Positives = 271/664 (40%), Gaps = 106/664 (15%)
Query: 60 RDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHK- 118
R I + L + ++P +AMYRKE LL + ++ ER ++ +
Sbjct: 445 RQAIRQVLTQFFERHEEVPVVAMYRKELAGPLLAMAADDVPLVTTQEELERQRGVRCKQS 504
Query: 119 -----------------VLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYD---- 157
VLWA+ DL K+ L +R+ + + + + D
Sbjct: 505 YDQGFVQPHHRRIRRWAVLWAVFDLALKFRSLTQRRERAAAALARSRDLLHSMMVDIDPL 564
Query: 158 ---ETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRST 214
+L + + D +L+ A + + DV
Sbjct: 565 GERAAQLDFDLRALDECQDALQTAGSSEALADV-------------------------QQ 599
Query: 215 KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKET----------------- 257
+ S A E+ S F +S Q L+ G + +P
Sbjct: 600 RMSQVLSAYPEELVSDFCLTSPQFVANLADAGQGGPVHEPPTPGGSVLDWATSALESFKA 659
Query: 258 --PEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
PE N + F + V Q R A + + VR ++R+ F AVVS+ T
Sbjct: 660 RHPEVCYENVAISSFTADNLVSQ-VRAAAVANLVNDAGVRTFLRNEFFRFAVVSSDATEA 718
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL-IQKAEEEKLLQVTIKLPEDSLNKLFSD 374
G + +D FH++A LR+KPL F + +L +++A E+L + + L + KL D
Sbjct: 719 GQAVLDPFHKYALAARLRKKPLHSFGGSDLMLRLEEANRERLANLLLHLEKGQQEKLVGD 778
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
E Y S + AQ WN R I+K AL+ LLP+ ++ + A+ L +Y A
Sbjct: 779 VAELYQSSDRAAVAQQWNTLRLEIVKSALEQHLLPAFRTHFQAKLLADARESALRQYSDA 838
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG-------PGKPE-TTFVMLDSSGEVVD 486
LW + GP + D + PR+ +G G+P T V L+ G +VD
Sbjct: 839 LWQVATAGPLRLPLADAEDEFLTNPRLCIVVYGNQEVNPATGQPNNTAVVFLNELGNLVD 898
Query: 487 VLFTGCLT--LRSQN-----VRDQQSKKN------DQERLLKFMMDHQPHVVVLGAVNLS 533
F G L+ LR V +K + D R+ + +++H PH V+L
Sbjct: 899 FFFAGQLSGNLRRSGQGAGAVFTDPAKASTCVCSKDANRIREKLLEHLPHAVLL------ 952
Query: 534 CTSLKDDIYEIIFKMVEEHPRDV--GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKG 591
+DI I ++E H D HE + DE L +L+ENSR + +L
Sbjct: 953 ----HEDIRNIGDSLLE-HSADALQDHETRGIYCYPVDEKLAKLWENSRAARSELREHAP 1007
Query: 592 NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ 651
V+RAV LGR +PLA++A LCGP RE+LS + +++ L DE+ + +VMV T Q
Sbjct: 1008 LVRRAVGLGRGALDPLALLAALCGPDREVLSLNVYDMQDALGKDERMAAVTRVMVTATAQ 1067
Query: 652 VGLD 655
G D
Sbjct: 1068 -GFD 1070
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEP--GESIIRP 995
E + R++++ + R+++ L R I HP F+NV+ +A L ++ G IIRP
Sbjct: 1086 EATTKRRADEHRPREQQVLV------RPIRHPMFKNVSQVDANAALGKEDVVVGSCIIRP 1139
Query: 996 SSRG-PSYLTLTLKVYDGVYAHKDII-----------EGGKDHKDIKSLVGIG-KTLKIG 1042
+ RG P+ L +++K G + I +G H + + +G
Sbjct: 1140 NVRGNPNVLDVSIKTAHGPASGIPTIMVVQLQEGDKPQGRAAHLTLAPPFSVDLNYCGLG 1199
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+EDLD+VV +++PLV + A+ S+RK+ ++A V++ +R EK P
Sbjct: 1200 TAKYEDLDQVVAEFVEPLVQNCMAVTSHRKYMDAAQAVVEDRIRQEKQANPKV------- 1252
Query: 1103 SHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
HP + LT +S H E PKGF FR + F DI+ ++A F++ DP
Sbjct: 1253 ---HP--YYLTIHKSV--HKEPFHATPKGFYFRSKTFTDIEHVLATFKKQPVDP 1299
>gi|345309238|ref|XP_001520857.2| PREDICTED: transcription elongation factor SPT6, partial
[Ornithorhynchus anatinus]
Length = 587
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 207/437 (47%), Gaps = 92/437 (21%)
Query: 801 NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----R 855
+K TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V R
Sbjct: 4 DKHITLYDIRAELSCRYKDLRTAYRSPNTEEVFNMLTKETPETFYIGKLIICNVTGIAHR 63
Query: 856 RVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE-------------------- 887
R QG+ +AI E+GL ++++ S+ W +
Sbjct: 64 RPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVT 123
Query: 888 -------LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQ 930
LSDK+ + G + C+I I ++ L CR S++ +NN ++ +
Sbjct: 124 GFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPK 183
Query: 931 NLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGE 990
D YY + + + E+ K K+ + K R+I HP F N+ +A K++ + G+
Sbjct: 184 --DTYYDFDAEAADHKLEEDLKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGD 240
Query: 991 SIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLD 1050
+IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLD
Sbjct: 241 VVIRPSSKGENHLTVTWKVNDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLD 295
Query: 1051 EVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHP 1107
E+V RY+ P+ S + +L+++ +++ G + +++ELL K E PT I Y E P
Sbjct: 296 EIVARYVQPMASFARDLLNHKYYQECSGGDRKKLEELLIKTKKEKPTFIPYFICACKELP 355
Query: 1108 GTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSV 1167
G F+L G P+G + R F+D H DP PS S
Sbjct: 356 GKFLL-------------GYQPRG---KPRWFKD----------HYQDPVPGITPSSSSR 389
Query: 1168 AAMVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 390 T-----RTPASINATPA 401
>gi|148668871|gb|EDL01038.1| suppressor of Ty 6 homolog (S. cerevisiae) [Mus musculus]
Length = 792
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 204/480 (42%), Gaps = 81/480 (16%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKIGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + A+ ++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
>gi|345481366|ref|XP_003424349.1| PREDICTED: transcription elongation factor SPT6-like [Nasonia
vitripennis]
Length = 987
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 139/229 (60%), Gaps = 13/229 (5%)
Query: 933 DPYYHEERSSRQS-EQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGES 991
DPYY E + + +E+ +K K+ ++ + R+I+HP F+N+T +A KL+ GE+
Sbjct: 619 DPYYDTETEGKDNLVEEETKKVKQ--RQMYVTRVIIHPSFRNITYADAEKLMKTMPQGEA 676
Query: 992 IIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDE 1051
IIRPSS+G +LT+T KV D V+ H D+ E GK++K +G++L IG + FEDLDE
Sbjct: 677 IIRPSSKGDDHLTVTWKVTDDVHQHIDVREEGKENK-----YSLGRSLWIGNEEFEDLDE 731
Query: 1052 VVDRYIDPLVSHLKAMLSYRK-----FRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEH 1106
++ R+IDP+ + ++ +++++ G K + +E+L+ K++ +I Y S +
Sbjct: 732 ILARHIDPMAASVRELMNFKSDYYVPHVMGMKDKAEEILKDLKSKNMNKIHYIISPSKNY 791
Query: 1107 PGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1155
PG F+L+Y+ HE+I + P GF+FRK F L+ +F++H +D
Sbjct: 792 PGKFLLSYLPRNRCGHEFITVIPDGFRFRKNSFPRFSDLMGWFKKHYND 840
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 139/343 (40%), Gaps = 81/343 (23%)
Query: 29 WIYNQLLS-GTLPL----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMY 83
WIYNQ T+ + + K+G ++++ I LD + Q ++PFI+ Y
Sbjct: 297 WIYNQAFEHKTISIQDAHLNEEAKERAKKGPQ-TVAK--ITTALDFIRNQHFEVPFISFY 353
Query: 84 RKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSY 143
RKE L L N N+ LW ++ D KW L++RK AL
Sbjct: 354 RKEYVLPEL---------NIND--------------LWKVYKYDAKWCQLRQRKEALLVL 390
Query: 144 YKK--RYEEESRRIYDETRLALNQQLFDSIS-KSLEAAETEREVDDVDLKFNLHFP---P 197
++K RY+E+ + L N +L + K LE +T E++D F L++ P
Sbjct: 391 FRKMKRYQEDFIMKDPDAPLPDNMRLIEEEDVKQLENVQTTEELNDCYHHFMLYYSHEIP 450
Query: 198 GEVGVDEGQYKRPKRSTK------------------------------------------ 215
+ Q K +R +
Sbjct: 451 KMQEIVRKQEKEKRRQERIQKRKQLIAEAEENGEDPPPEDPFEDDDDNEPEETLKQAVRT 510
Query: 216 --YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSS 273
YS C +AGL +A +FG EQ LS E E+E P +A+ + F ++
Sbjct: 511 GPYSICRRAGLESLAKRFGLPPEQYAKNLSEEYQIFEVEQELNEPTAVAAEYVGEKFQTA 570
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
VL+ A+ M A++++ EP VR+ VR ++ + A +S PT G
Sbjct: 571 DEVLKAAQLMVAIQLAREPLVRESVRKMYKEKAKISVRPTKQG 613
>gi|322785525|gb|EFZ12187.1| hypothetical protein SINV_00860 [Solenopsis invicta]
Length = 693
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 146/263 (55%), Gaps = 21/263 (7%)
Query: 906 QKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERL 965
+ R +F + SE++ + N D + E ++ K++++ + +R+
Sbjct: 227 KTTRKSIFEIYEPSELKRGHFTDMDNED--------IKVEEDDQKAKQRQI----YVKRV 274
Query: 966 IVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKD 1025
I+HP F N++ E +KL+ + GE+I+RPSS+G +LT+T KV D + H ++ E GK+
Sbjct: 275 IIHPAFHNISFAETVKLMQTMKQGEAIVRPSSKGADHLTVTWKVTDDILQHINVREEGKE 334
Query: 1026 HKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVD 1082
+ +G++L IG + FEDLDE++ R+++P+ +++ ++ ++ ++ G K +
Sbjct: 335 -----NAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYVSELVDFKYYKSAVDGIKDRAE 389
Query: 1083 ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDI 1142
+LL+ +K E P I Y S +PG F+ +Y+ T HEYI + +GF+FR MF +
Sbjct: 390 DLLKEQKKENPNGIPYIISASKTYPGKFLFSYLPCTRCRHEYITVTSEGFRFRAHMFGRV 449
Query: 1143 DRLVAYFQRHIDDP-QGDSAPSI 1164
L+ +F+ H D G S PS
Sbjct: 450 SHLLRWFKEHFRDAVPGQSIPST 472
>gi|238594097|ref|XP_002393383.1| hypothetical protein MPER_06889 [Moniliophthora perniciosa FA553]
gi|215460786|gb|EEB94313.1| hypothetical protein MPER_06889 [Moniliophthora perniciosa FA553]
Length = 429
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 169/333 (50%), Gaps = 16/333 (4%)
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREIL 621
++ ++Y + L R+Y +S + ++ K + L RY QNPL A L G +I
Sbjct: 54 DIPVLYIPDELARIYHHSARAKEEFSALSPIAKYCIGLARYAQNPLNEYAAL---GSDIT 110
Query: 622 SWKLCPLENFLTPDEKY-GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
+ + L P +K +E+ +VD+TN+VG+DIN A+ ++ L F+ GLGPRKA
Sbjct: 111 AITFIEDDQHLVPQDKLLSALERALVDITNKVGVDINRAVADQYYRHLLPFVCGLGPRKA 170
Query: 681 ASLQRSLV-RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID------ 733
L + G++ R F+ L K+F+NA G LR+ + + + +D
Sbjct: 171 RELVSKIDGLGGSLVNRNQFIRNGVLTTKIFLNAAGVLRIHQEQEDLRTKHRMDDELAPD 230
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMA-IEHVRDRPDLLKTYLLDR 792
LD+TRIHPE Y LA+++A + D E D++D+ + ++ I H D L LD
Sbjct: 231 PLDNTRIHPEDYELARKMATDALELD-EEDIHDEHPSHVVSLIMHDDDNEKKLSDLNLDD 289
Query: 793 H---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
+ + ++ KR TL +IR EL+ F + R + + E M+SGET+ TL G +
Sbjct: 290 FAISLFQANQDQKRHTLNVIRDELLKPFAEQREPFPPVTGWEVLTMLSGETQKTLQVGLI 349
Query: 850 VQATVRRVQGQRAICVLESGLAGMLMKEDYSDD 882
V R++ A L+SG+ G + E +DD
Sbjct: 350 TSVVVYRMRPGGASVRLDSGIEGQINNEWLTDD 382
>gi|356510381|ref|XP_003523917.1| PREDICTED: uncharacterized protein LOC100796035 [Glycine max]
Length = 267
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 114/229 (49%), Gaps = 66/229 (28%)
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
+ DA+ NFL P M KEAR L++ +AK+WLLM+Y +WN+VSV PY +
Sbjct: 1 MPDAISNFLFPYMEKEARELLNAKAKNWLLMKYAMQVWNRVSVAPYLKN--------AQK 52
Query: 459 PRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMM 518
RV+ACC G GKP+T M++S + C + + + Q+ + M
Sbjct: 53 KRVMACCGGNGKPDT---MMNSMN------YFNCQIISMMSEHNLQNFSQE--------M 95
Query: 519 DHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYEN 578
+ QP VV+ GDE LPRLYE+
Sbjct: 96 EGQPPVVL-----------------------------------------GDEGLPRLYED 114
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
S IS QLP Q G VKRAVALGRYL NPLAMVATLC EI+SWKL P
Sbjct: 115 SEISESQLPRQHGIVKRAVALGRYLLNPLAMVATLCEMKNEIVSWKLNP 163
>gi|197245957|gb|AAI69093.1| Supt6h protein [Rattus norvegicus]
Length = 391
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 122/215 (56%), Gaps = 13/215 (6%)
Query: 973 NVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSL 1032
N+ +A K++ + G+ IIRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 2 NINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA----- 56
Query: 1033 VGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEK 1089
+G TL I + FEDLDE+V RY+ P+ S + +L+++ ++ G + +++ELL K
Sbjct: 57 FSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTK 116
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1149
E PT I Y E PG F+L Y P EY+ + P+GF++R ++F ++ L +F
Sbjct: 117 KEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWF 176
Query: 1150 QRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTAS 1184
+ H DP PS S R+PA+ +T +
Sbjct: 177 KDHYQDPVPGITPSSSSRT-----RTPASINATPA 206
>gi|402581284|gb|EJW75232.1| hypothetical protein WUBG_13858, partial [Wuchereria bancrofti]
Length = 170
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 111/172 (64%), Gaps = 9/172 (5%)
Query: 989 GESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFED 1048
GE+IIRPSS+ S+LT+T KV DG+Y H DI E GK H+ +GKTL IG + FED
Sbjct: 1 GEAIIRPSSKSVSHLTVTWKVADGIYQHIDIKEEGKQHQ-----FSLGKTLLIGTEEFED 55
Query: 1049 LDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAE----VDELLRIEKAEFPTRIVYGFGISH 1104
LDE++ R+I P+ + + +LS++ + G +AE ++ L EK P RI Y S
Sbjct: 56 LDEILARHIQPMAALARDVLSHKYYLDGKRAEDRDAIEGYLFDEKKRNPQRIPYTLTPSQ 115
Query: 1105 EHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
++PG F+++Y+ HEY+ + P+GF+FR+++F+ ++ ++++F+ H +P
Sbjct: 116 DYPGKFVISYLPRNKARHEYMTVTPEGFRFRQQLFQSLETVLSWFKVHYREP 167
>gi|170068397|ref|XP_001868851.1| transcription elongation factor spt6 [Culex quinquefasciatus]
gi|167864419|gb|EDS27802.1| transcription elongation factor spt6 [Culex quinquefasciatus]
Length = 573
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 203/477 (42%), Gaps = 90/477 (18%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
+E+ WIY P+ Q ++ H ++++ I + LD + Q L++PFIA YR
Sbjct: 127 EEAEWIYKHAFCKP-PISSQESYS--RKSHS-AVAK--IKQALDFIRNQHLEVPFIAFYR 180
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYY 144
KE + DL N+ LW ++ D KW L RK+ L +
Sbjct: 181 KE---YVQPDLNIND--------------------LWKVYKFDAKWCQLNVRKTNLHKLF 217
Query: 145 KKR--------YEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD---LKFNL 193
+ E I D+ R+ L D + L+AA+T E+ DV L + +
Sbjct: 218 ENMRNCQLDNIMENPDAPIPDDIRV-----LKDDDFERLKAAQTPEELKDVHNHFLLYYV 272
Query: 194 HFPP----------------------------GEVGVD---------------EGQYKRP 210
H P E GVD E K
Sbjct: 273 HLIPVMQEQNRKKESERLRQEKIDARRKALEASEDGVDGLTMDNLEIEEEPYTEESVKLN 332
Query: 211 KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMF 270
S Y+ C KAGL +A +FG + EQ + E+E P ++A + F
Sbjct: 333 VDSGPYAMCRKAGLSGLAKRFGLTPEQYAENVRDSYQRHEVEQEPNDPTDVAKEYLNKRF 392
Query: 271 NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVK 330
+ + VL A+ M A +++ EP +RK VR I+ + A VS PT G ID H +K
Sbjct: 393 VNVEDVLYAAKFMVARQLAKEPLLRKCVREIYYERAKVSVRPTKKGMKEIDENHPCYSMK 452
Query: 331 WLREKPLRKFEDAQWLLIQKAEEEKLLQVTI--KLPEDSLNKLFSDCKEHYLSDGVSKSA 388
++++KP+R Q+L +Q A+E+KLL + + ++ S L + K Y D SK+
Sbjct: 453 YVKDKPVRDLAGDQYLKLQIAQEDKLLSIYVSEQIEGTSSADLIDEMKTLYQKDEFSKNV 512
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ 445
Q WN R ++ A +LP + +E +S++ +K +L + ++N + V PY+
Sbjct: 513 QEWNKLRSECVELAFTKMILPDLRRELQSILLEESKDAILKVCCRKMYNWIKVAPYK 569
>gi|442806099|ref|YP_007374248.1| RNA-binding S1 domain-containing protein [Clostridium stercorarium
subsp. stercorarium DSM 8532]
gi|442741949|gb|AGC69638.1| RNA-binding S1 domain-containing protein [Clostridium stercorarium
subsp. stercorarium DSM 8532]
Length = 715
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 187/779 (24%), Positives = 338/779 (43%), Gaps = 129/779 (16%)
Query: 144 YKKRYEEESRRIYDETRLALNQ-QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGV 202
Y K E + +Y RL Q ++ D I+ S+E A T +E++D+ F
Sbjct: 59 YLKNLEARKKDVY---RLIEEQGKMTDEIAASIEGAMTLQEIEDIYRPF----------- 104
Query: 203 DEGQYKRPKRSTKYSSCSKAGLWEVAS--KFGYSSEQLGLQLSLEKMGDELEDPKETPEE 260
RPKR T+ + GL +AS G +++ ++E E +P++
Sbjct: 105 ------RPKRRTRAMIAKEKGLEPLASLMMLGNITDE-----TIENKAREYINPEKG--- 150
Query: 261 MASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAI 320
N+ + VL+GAR + A EIS VRK +R+IF + VV + + DS
Sbjct: 151 ---------LNNVEEVLEGARDIVAEEISDNALVRKEIRNIFHLSGVVESVAVKEEDSVY 201
Query: 321 DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYL 380
++ F ++P++ + L I + E E+ L+V+I +PED + Y
Sbjct: 202 RQYYDF-------KEPVKTIPSHRILAINRGEREEFLKVSISVPEDKVLAFL------YE 248
Query: 381 SDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVS 440
S G+ + ++DA + PS+ +E R+ ++ RA+ + + + L +
Sbjct: 249 SFGIKDREN--RKHMAMAVEDAYKRLIRPSIEREIRNELTERAEEQAMSVFRENLRKLLM 306
Query: 441 VGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNV 500
P N + + A R C ++D +G+ VL TG +
Sbjct: 307 QPPVH---NCVVLGIDPAYRT-GC---------KICVVDETGK---VLATGVVYPTPPQN 350
Query: 501 RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
R +++K +E + K+ +D V+ +G S + +I+ + M++E ++V +
Sbjct: 351 RTEEAKAVLKELIEKYDVD----VIAIGN---GTASRETEIF--VADMLKEIEKEVKY-- 399
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
+ +E+ +Y SR+ +++ P +++ AV++ R LQ+PLA + + +
Sbjct: 400 -----MVVNEAGASVYSASRLGAEEFPDFDVSLRSAVSIARRLQDPLAELVKIDPKSIGV 454
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
++ + L+ E G V+ DV N+VG+D+N A + L ++SG+ A
Sbjct: 455 GQYQHDMNQKRLS--ETLG---AVVEDVVNKVGVDLNTA-----SVSLLSYVSGISKSVA 504
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
A++ + G +R++ LG K+F GFLR+R ++LD+T +
Sbjct: 505 ANIVAYREKVGKFRSREELKKVPKLGPKIFEQCAGFLRIRDGD---------NVLDNTAV 555
Query: 741 HPESYGLAQELAKEV--YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKK 798
HPESY + L K++ + DI N D D +++ I+ + LK + +I E
Sbjct: 556 HPESYDACELLLKKLGYTHEDIR---NHDLDLIDLKIKEIG-----LKNLAEELNIGEP- 606
Query: 799 RENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
TL I EL +D R++ P + I L G V+ TVR V
Sbjct: 607 ------TLKDIIEELKKPGRDPRDELPPPMLRRDILDIKD-----LKPGMVLTGTVRNVA 655
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
A + G++ SD + + L D + GDI+T K+ + R ++ L R
Sbjct: 656 DFGAFVDIGVHQDGLVHISQLSDKFVKNPL-DVVSVGDIVTVKVLDVDIERKRISLTMR 713
>gi|145533645|ref|XP_001452567.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420266|emb|CAK85170.1| unnamed protein product [Paramecium tetraurelia]
Length = 1501
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 170/736 (23%), Positives = 301/736 (40%), Gaps = 117/736 (15%)
Query: 226 EVASKFGYSSEQLGLQL---SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
E A KF Y+S++L +L S++ ++D +E A+ + +SS ++ +
Sbjct: 359 EAALKFCYTSDELFSKLQGKSVQVNRKFIQDLEELWSHQANTTEFKSQDSSAEYVKLLQK 418
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
E+ P +R ++ I+ D+ ++ST PT G+ I + F VK +R + + ED
Sbjct: 419 YLMNELYHHPFIRSFMSQIYRDHLLISTEPTQLGNKEITAVSYFYPVKRIRHRQYKYMED 478
Query: 343 AQWLLIQKAEEEKLLQVTI-----------KLPEDSLNKLFSDCKEHYLSDGVSKSAQLW 391
W+ +AE+ + ++ K+P D + L D + D K +
Sbjct: 479 QTWMQCLRAEQLGYINISFTVSKDKDHKKEKIPRDDIMVLLYD--KFVKIDDQQKEQESI 536
Query: 392 NDQRELILKDALDNFLLPSM---VKEARSLMSGRAKSWLLMEYGKALWNK----VSVGPY 444
R+LIL+ L P + +K+ +S + + + K+L NK +
Sbjct: 537 MRFRDLILRGILQELWYPILEKQIKQKLQTLSTKHIVRMCQQKFKSLINKQPHISELANN 596
Query: 445 QRKDNDIT-PDEEAAPRVLACCWGPGKPETTF-------------VMLDSSGEVVDVLFT 490
Q + IT PD + V+ GK T+ ++D GE +
Sbjct: 597 QLRQQLITNPDVKIMSLVIGQEQSDGKLLKTYSQDCSIQKKCIGMAIIDYKGEQQSLQIF 656
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
LT + + + +Q L F ++P +VV+ A + C L+ D+
Sbjct: 657 NYLTQDERRTEMLEQIRKEQVLLDSFFEKYKPDLVVISANHSDCLKLRADL--------- 707
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R + + I D + R+Y S S+ Q P +K A++L RY NP+A V
Sbjct: 708 ---RKKYKQTSSVQITLADSQISRIYSMSEKSNLQSPDTPQILKEAISLARYKLNPMAEV 764
Query: 611 ATLCGPGRE---ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLD-INLAIHREWQF 666
L + L L PL++ ++ ++Q ++ NQVG+D ++ +H+
Sbjct: 765 LNLWSDAIDKNGCLHLNLHPLQSMVSQQVLLDALKQTATEIVNQVGVDLVDCTLHKHLA- 823
Query: 667 APLQFISGLGPRKAASLQRSLVR---AGAIFT------------------------RKDF 699
+QF++GLG R+A L ++V+ + ++F R+D
Sbjct: 824 DQMQFVNGLGRRQAKHL-ITMVKGLLSKSLFNNNYEDERLIYSKLEQDQKEYIQIERQDI 882
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVY 756
+ L K VF N GF++++R Q LD TR+ + Y A +A+ EV
Sbjct: 883 LKTQILKKVVFKNVQGFIKIQRGIQP---------LDITRMQIKMYSDAVHIARCALEVG 933
Query: 757 NRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLI----RRE 812
RD D + + +P ++ L+ K+++ + E L+ + E
Sbjct: 934 GRD---------DKQNTVVRQLMSQPHKMEDLQLEDWAKQRELRDGSEKFTLVAQFMKEE 984
Query: 813 LIHGF-QDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV--------RRVQGQRAI 863
L + F + K+ S E FY I+ E+ T + VVQ + R G R +
Sbjct: 985 LANPFLYKFDTSNKDMSNSEIFYAITQESPYTFRKNSVVQGLITKKLESRDRNKDGDRLL 1044
Query: 864 CVL-ESGLAGMLMKED 878
L +GL G L KED
Sbjct: 1045 IKLSNNGLCGTLRKED 1060
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
R I HP F+ V + A++ L ++ GE IIRP+ + +L +T K + GV H +
Sbjct: 1183 RNINHPKFKQVLLNGALEYLESQPVGEYIIRPNQKLKDHLNITWKFHQGVIVHLYV---- 1238
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
+++KS L + T+E +E+ + YI P H++A ++ +KF +V++
Sbjct: 1239 ---QELKSAQSYKPQLVLNGKTYESFNEIFENYITPCNLHMEAAINNKKFYNMKMEQVEQ 1295
Query: 1084 LLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNP-HHEYIGLYPKGFKFRKRMFEDI 1142
L+ +K + I YGF ++ + P +L Y+ N EYI + P+G F M ++
Sbjct: 1296 KLKEDKEKDEEIIPYGFCVTEKAPQHIVLLYMMQKNKVEKEYIKVKPEGLSFHSVMQNNL 1355
Query: 1143 DRLVAYFQRHI 1153
L +F+++
Sbjct: 1356 QELTLWFKQNF 1366
>gi|359410422|ref|ZP_09202887.1| Tex-like protein [Clostridium sp. DL-VIII]
gi|357169306|gb|EHI97480.1| Tex-like protein [Clostridium sp. DL-VIII]
Length = 725
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 193/800 (24%), Positives = 342/800 (42%), Gaps = 150/800 (18%)
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLF-DSISKSLEAAETEREVDDVDLKFNLH 194
RK + + Y + EE R D RL Q+ F D I K+L++A T EV+D+ F
Sbjct: 52 RKLSERLTYLRNLEE---RKADVKRLIQEQEKFTDEIGKALDSATTLTEVEDIYRPF--- 105
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE-KMGDELED 253
+PK+ TK + ++ GL +A +L LE K +L+
Sbjct: 106 --------------KPKKRTKATIAAEKGLKPLA------------ELILEGKFNGDLD- 138
Query: 254 PKETPEEMASNF---KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
E AS + + + NS +A+ QGA + A IS E RKY+R + + +
Sbjct: 139 ------EEASKYISEEKGVANSEEAI-QGALDIIAETISDEAKYRKYIREFVIREGNIES 191
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
+ + + + +++++ + + K + L I + E+EK+L V I ED +
Sbjct: 192 KGSSEDPTPYEMYYEYS-------EAVNKIPPHRILAINRGEKEKILSVKITANEDKVI- 243
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
YL + V K + +++ +L +KD+ + PS+ +E RS ++ + +
Sbjct: 244 -------QYLENQVLKGNSILDEKLKLAIKDSYKRLIYPSIEREIRSELTDIGEEGAIKI 296
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLF 489
+ + L + P + K + + PG + +LDS+G+ ++
Sbjct: 297 FKENLKALLLQAPIKGK--------------VVMGYDPGFRTGCKIAILDSTGKFLE--- 339
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
+ RD + K + L + H V+ LG S S E+I +M+
Sbjct: 340 -NTAVYPTVPKRDIEGTK---KTLKALIAKHNVDVISLGNGTASRES-----EEVIAEMI 390
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
E + G E L+ V E+ +Y S +++ + P V+ A+++GR LQ+PLA
Sbjct: 391 TEIKNETGKE---LAYVIVSEAGASVYSASELATKEYPDLDVTVRGAISIGRRLQDPLAE 447
Query: 610 VATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ + G G+ ++ +TP + + V+ D N VG+D+N+A
Sbjct: 448 LVKIDPKAIGVGQ---------YQHDVTPKKLEESLAGVVEDSVNTVGVDLNIATP---- 494
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
+ L ISG+ A ++ AG +RK+ + LG+K + GFLRV S +
Sbjct: 495 -SLLTHISGINAAIAKNIVDYREEAGRFTSRKELLKVKRLGQKAYEQCAGFLRVDDSKEP 553
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDL 784
LD+T +HPESYG+A++L + + YN+ GDL ++
Sbjct: 554 ---------LDNTSVHPESYGIAKKLIEVLGYNK---GDLKNN----------------- 584
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQD--EEF---YMISGE 839
K +D + K +N ETL + L +D + K+P +D EE + +G
Sbjct: 585 -KLSDIDERAEAKGLKNLSETLEVGELTL----KDIIKELKKPGRDPREEMPKPILKTGI 639
Query: 840 TE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDIL 898
E L G V+ TVR V A + G++ K ++ + L D + GDI+
Sbjct: 640 IEMKDLKPGMVLAGTVRNVSDFGAFVDIGVHQDGLVHKSQMANRFVKHPL-DIVKVGDIV 698
Query: 899 TCKIKSIQKNRYQVFLVCRE 918
I + + R ++ L ++
Sbjct: 699 KVAILEVDEKRKRISLTMKD 718
>gi|322786163|gb|EFZ12768.1| hypothetical protein SINV_02255 [Solenopsis invicta]
Length = 716
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 115/191 (60%), Gaps = 9/191 (4%)
Query: 978 EAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGK 1037
E +KL+ + GE+I+RPSS+G +LT+T KV D + H D+ E GK+ + +G+
Sbjct: 292 ETVKLMQTMKQGEAIVRPSSKGADHLTVTWKVTDDILQHIDVREEGKE-----NAFSLGQ 346
Query: 1038 TLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPT 1094
+L IG + FEDLDE++ R+++P+ ++ ++ ++ ++ G K ++LL+ +K E P
Sbjct: 347 SLWIGNEEFEDLDEIIARHVNPMAAYASELVDFKYYKSAVDGIKDRAEDLLKEQKKENPN 406
Query: 1095 RIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHID 1154
I Y + +PG F+L+Y+ T HEYI + +GF+FR +MF + L+ +F+ H
Sbjct: 407 GIPYIISAAKTYPGKFLLSYLPRTRCRHEYITVTSEGFRFRAQMFGRVSDLLRWFKEHFR 466
Query: 1155 DP-QGDSAPSI 1164
DP G S PS
Sbjct: 467 DPVPGQSTPST 477
>gi|327292058|ref|XP_003230737.1| PREDICTED: transcription elongation factor SPT6-like, partial [Anolis
carolinensis]
Length = 225
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 124/223 (55%), Gaps = 9/223 (4%)
Query: 895 GDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEK 954
G ++ C+I I ++ L CR S++ + + D YY + + +QE+ K K
Sbjct: 2 GMMVHCRIMKIDIEKFSADLTCRTSDLMDKSNEWKLPKDTYYDFDAEAADHKQEEEVKRK 61
Query: 955 ELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVY 1014
+ + K R+I HP F N+ +A K++ + + G+ IIRPSS+G ++LT+T KV +GV
Sbjct: 62 QQRTTYIK-RVIAHPSFHNINFKQAEKMMESMDQGDVIIRPSSKGENHLTVTWKVCEGVS 120
Query: 1015 AHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR 1074
H D+ E GK+ + +G TL I + FEDLDE+V RY+ P+ S + +LS++ ++
Sbjct: 121 QHVDVREEGKE-----NAFSLGATLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQ 175
Query: 1075 K---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
G + +++ELL K E PT I Y + PG F+L Y
Sbjct: 176 DCHGGDRKKLEELLIKTKKEKPTFIPYFVCACRDLPGKFLLGY 218
>gi|224137602|ref|XP_002322598.1| predicted protein [Populus trichocarpa]
gi|222867228|gb|EEF04359.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 67/84 (79%)
Query: 1210 TGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSNNSNRGNSSNSERQDSSYDTPKWDSANK 1269
TGRNDYR+GG RDGH +G PRP+ GRGRGRGS NS RGN+S +ERQDS YD P+WDS K
Sbjct: 71 TGRNDYRSGGSRDGHQNGPPRPFSGRGRGRGSYNSTRGNNSGNERQDSGYDKPRWDSGTK 130
Query: 1270 SGDDSWGNFPGAKAQNPAGREAFP 1293
D+ WG+FPGAK QN GREAFP
Sbjct: 131 DNDEGWGSFPGAKVQNSPGREAFP 154
>gi|451817493|ref|YP_007453694.1| Tex-like protein [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451783472|gb|AGF54440.1| Tex-like protein [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 725
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 189/796 (23%), Positives = 338/796 (42%), Gaps = 142/796 (17%)
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLF-DSISKSLEAAETEREVDDVDLKFNLH 194
RK + + Y + EE R D TRL Q+ F D I K+LE A T EV+D+ F
Sbjct: 52 RKLSERLTYLRNLEE---RKADVTRLIQEQEKFTDEIGKALENATTLTEVEDIYRPF--- 105
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
+PK+ TK + ++ GL +A +L LE G D
Sbjct: 106 --------------KPKKRTKATIATEKGLKPLA------------ELILE--GKFKGDL 137
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
E + S K + +S+ +QGA + A IS E RKY+R + + + +
Sbjct: 138 GEEATQYISEEKGVV--TSEEAIQGALDIIAETISDEAKYRKYIREFVIREGNIESKGSS 195
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
+ + + +++++ + + K + L I + E+EK+L V I ED +
Sbjct: 196 EEPTPYEMYYEYS-------EAVNKIPPHRILAINRGEKEKILSVKITANEDKII----- 243
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
YL + + K ++ +++ +L +KD+ + PS+ +E RS ++ + + + +
Sbjct: 244 ---QYLENQILKGNEILDEKLKLAIKDSYKRLIYPSIEREIRSELTDIGEEGAIKIFKEN 300
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
L + P + K + + PG + +LD++G+ ++
Sbjct: 301 LKALLLQAPIKGK--------------VVMGYDPGFRTGCKIAILDATGKFLE----NTA 342
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
+ RD + K + L + H V+ LG S S E+I +M+ E
Sbjct: 343 VYPTVPKRDIEGTK---KTLKALIAKHNVDVISLGNGTASRES-----EEVIAEMLTEIK 394
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
+ G E L+ V E+ +Y S +++ + P V+ A+++GR LQ+PLA + +
Sbjct: 395 NETGKE---LAYVIVSEAGASVYSASELATKEYPDLDVTVRGAISIGRRLQDPLAELVKI 451
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ ++ +TP + + V+ D N VG+D+N+A + L
Sbjct: 452 DPKAIGVGQ---------YQHDVTPKKLEESLAGVVEDSVNTVGVDLNIATP-----SLL 497
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
ISG+ A ++ AG +RK+ + LG+K + GFLRV S +
Sbjct: 498 THISGINAAIAKNIVDYREEAGRFTSRKELLKVKRLGQKAYEQCAGFLRVDDSKEP---- 553
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTY 788
LD+T +HPESY +A++L + + YN++ DL ++ K
Sbjct: 554 -----LDNTSVHPESYDIAKKLIEVLGYNKE---DLKNN------------------KLG 587
Query: 789 LLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQD--EEF---YMISGETE-D 842
+D + K +N ETL + L +D + K+P +D EE + +G E
Sbjct: 588 DIDERAEAKGLKNLSETLEVGELTL----KDIIKEIKKPGRDPREEMPKPILKTGIVELK 643
Query: 843 TLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKI 902
L G V+ TVR V A + G++ K ++ + L D + GDI+ I
Sbjct: 644 DLKPGMVLAGTVRNVSDFGAFVDIGVHQDGLVHKSQMANRFVKHPL-DIVKVGDIVKVAI 702
Query: 903 KSIQKNRYQVFLVCRE 918
+ + R ++ L ++
Sbjct: 703 LEVDEKRKRISLTMKD 718
>gi|108761556|ref|YP_629648.1| S1 RNA-binding domain-containing protein [Myxococcus xanthus DK
1622]
gi|108465436|gb|ABF90621.1| S1 RNA binding domain protein [Myxococcus xanthus DK 1622]
Length = 783
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 153/645 (23%), Positives = 272/645 (42%), Gaps = 92/645 (14%)
Query: 275 AVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLRE 334
A L GAR + A ++ + +R+ R + + + P F + G E
Sbjct: 158 AALAGARDICAERVAEDAGLRREAREVSARRGTLCSNVVPAKKGETTKFENYYG----HE 213
Query: 335 KPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQ 394
+PL + + L + + EEE +L+V + LP+D + L + V+K +++ +
Sbjct: 214 EPLSQAPSHRVLALLRGEEEGVLKVKLSLPDDEVKGLLA-------GRVVTKPQSIFSQE 266
Query: 395 RELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD 454
++D+ D + PS+ E RS + RA + +G+ L + + P
Sbjct: 267 LRAAVEDSWDRLMGPSLEAELRSELKERADRQAIGVFGENLRHLLLTPPA---------- 316
Query: 455 EEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERL 513
A VLA PG + T M+D +G+VV+ LTL S+ D++++
Sbjct: 317 --GARAVLA--LDPGLRTGTKLAMMDVTGKVVE-----TLTLYSERGADERARAAKLLAA 367
Query: 514 LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM-DELSIVYGDESL 572
+ + H+P +V +G S + E RD M ++ +V E
Sbjct: 368 V--VQKHKPELVAVGNGTGS-------------REAEVFVRDTLKAMGSQVPVVSVSEQG 412
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFL 632
+Y S ++ D+ P +++ AV++GR LQ+PLA + + + ++ + L
Sbjct: 413 ASIYSASEVARDEFPDLDVSLRGAVSIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQGLL 472
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+K G +V+ N VG+D+N A Q L+ +SG+GP A L G
Sbjct: 473 K--KKLG---EVVDSCVNAVGVDVNTA---SPQL--LEHVSGVGPSLAKKLVAHRASKGR 522
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
TR++ + GLG K F A GFLRVR + + LD + +HPE YG+ + +A
Sbjct: 523 FTTRRELLKVSGLGPKTFEQAAGFLRVRGT----------EPLDASAVHPERYGVVERMA 572
Query: 753 KEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRE 812
K+ L +A+ + +L++ L R++ E TL I E
Sbjct: 573 KD----------------LGVAVSALVGNAELVRKIDLKRYLGPDLGEM---TLKDILAE 613
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
L +D R + P E+ + + + EG V+Q V V A + G
Sbjct: 614 LEKPSRDPRGDFTAPQHREDLRSL-----EDVKEGMVLQGVVTNVTAFGAFVDVGVHQDG 668
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
++ S + + S+ + GD LT ++ ++ R ++ L R
Sbjct: 669 LVHVSQISTRFV-KDPSEVVKVGDRLTVRVLTVDLARKRLALSVR 712
>gi|256005189|ref|ZP_05430157.1| RNA binding S1 domain protein [Clostridium thermocellum DSM 2360]
gi|385779912|ref|YP_005689077.1| Tex-like protein [Clostridium thermocellum DSM 1313]
gi|419722063|ref|ZP_14249213.1| Tex-like protein [Clostridium thermocellum AD2]
gi|419726105|ref|ZP_14253129.1| Tex-like protein [Clostridium thermocellum YS]
gi|255990843|gb|EEU00957.1| RNA binding S1 domain protein [Clostridium thermocellum DSM 2360]
gi|316941592|gb|ADU75626.1| Tex-like protein [Clostridium thermocellum DSM 1313]
gi|380770501|gb|EIC04397.1| Tex-like protein [Clostridium thermocellum YS]
gi|380781914|gb|EIC11562.1| Tex-like protein [Clostridium thermocellum AD2]
Length = 718
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 186/846 (21%), Positives = 346/846 (40%), Gaps = 177/846 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE + + ND R + H+ L + +L+ +
Sbjct: 32 IPFIARYRKE-------------ITGELNDQVLR----QLHERLIYLRNLEAR------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+EE RR+ DE +L I+ SLE A T REV+D+ F
Sbjct: 68 ------------KEEVRRLIDE-----QGKLTAEITASLEKATTLREVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A + G S+E + +P++
Sbjct: 106 ------------RPKRRTRATVAKEKGLEPLAEIIMAQELKTG---SIEDIAKPFINPEK 150
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
N+ + L GA + A +IS P +R VR +FM ++ + D
Sbjct: 151 E------------VNTVEDALNGAMDIIAEDISDNPHIRSIVRDVFMKQGMIVSKKKKDE 198
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
DS ++ F+ +P+ K + L I + E+E+ LQV I++PE++L
Sbjct: 199 DSVYRMYYDFS-------EPVAKIAGHRVLAINRGEKEEFLQVKIEVPEETL-------M 244
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
E + V + + ++ E L D+ + + PS+ +E R+ ++ A+ + + L
Sbjct: 245 EQLKAKLVKRPPSITSEYVEKALADSYERLIFPSVEREVRNELTENAEEQAIKVFATNLK 304
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCL 493
N + P + K P + ++D +G+V+D V++
Sbjct: 305 NLLLQPPVKGKT--------------VLGLDPAYRTGCKIAVVDETGKVLDTAVIYPTP- 349
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
Q+K + + ++K +++ H V + ++ S + +I+ + ++++E
Sbjct: 350 ---------PQNKVEEAKEIMKRLIEK--HGVDIISIGNGTASRESEIF--VAELLKEID 396
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
R V + + E+ +Y S++ +++ P ++ AV++ R LQ+PLA + +
Sbjct: 397 RKVYY-------MVVSEAGASVYSASKLGAEEFPDFDVALRSAVSIARRLQDPLAELVKI 449
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFIS 673
P S + ++ + ++ V+ D N VG+D+N A + L +IS
Sbjct: 450 -DPK----SIGVGQYQHDMNQKRLSETLQGVVEDCVNSVGVDLNTA-----SPSLLSYIS 499
Query: 674 GLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
G+ A ++ G R++ LG K F GFLR+ +
Sbjct: 500 GINSVIAKNIVEYRETNGKFKRREELKKVKKLGDKTFEQCAGFLRIPDGD---------N 550
Query: 734 LLDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
+LD+T +HPESY A++L ++V NR ++G + E +M IE V +
Sbjct: 551 VLDNTSVHPESYEAAKKLLDIMGYSLEDVKNRKLDGLV---EKVEKMGIEKVAREIGVGV 607
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
L D I +EL+ +D R++ +P + + + L
Sbjct: 608 PTLKD-----------------IIKELLKPGRDPRDELPKPMLLTDVLHL-----EDLRP 645
Query: 847 GRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQ 906
G ++ TVR V A + G++ + SD + S + D + GDI+ +I +
Sbjct: 646 GMILTGTVRNVADFGAFVDVGVHQDGLVHISELSDKYVKSPM-DVVSVGDIVKVRILDVD 704
Query: 907 KNRYQV 912
R ++
Sbjct: 705 VERKRI 710
>gi|150015329|ref|YP_001307583.1| RNA-binding S1 domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149901794|gb|ABR32627.1| RNA binding S1 domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 725
Score = 124 bits (310), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 189/798 (23%), Positives = 341/798 (42%), Gaps = 146/798 (18%)
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLF-DSISKSLEAAETEREVDDVDLKFNLH 194
RK + + Y + EE R D TRL Q+ + + I K+LE A T EV+D+ F
Sbjct: 52 RKLSERLTYLRNLEE---RKADVTRLIQEQEKYTNEIGKALENATTLTEVEDIYRPF--- 105
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
+PK+ TK + + GL +A +L L+ L DE E
Sbjct: 106 --------------KPKKRTKATIAVEKGLKPLA--------ELILEGKLSGDLDE-EAA 142
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
K EE +SQ +QGA + A IS E RKY+R + + + +
Sbjct: 143 KYISEEKG-------VTNSQEAIQGALDIIAESISDEAKYRKYIREFVIREGNIESKGSS 195
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
D + + +++++ + + K + L I + E+EK+L V I + ED +
Sbjct: 196 DEPTPYEMYYEYS-------EAVNKIPPHRILAINRGEKEKILNVKITVNEDKII----- 243
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
YL + V K + +++ +L ++D+L + PS+ +E RS ++ + + + +
Sbjct: 244 ---QYLENQVLKGNETLDEKLKLAIRDSLKRLIYPSIEREIRSELTDIGEEGAIKIFKEN 300
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
L + P + K + + PG + +LD++G+ ++
Sbjct: 301 LKALLLQAPIKGK--------------VVMGYDPGFRTGCKIAILDATGKFLE----NTA 342
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
+ RD + K + L + H V+ LG S S E+I +M+ E
Sbjct: 343 VYPTVPKRDIEGTK---KTLKALIAKHNVDVISLGNGTASRES-----EEVIAEMITEIK 394
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
+ G E L+ V E+ +Y S +++ + P V+ A+++GR LQ+PLA + +
Sbjct: 395 NETGKE---LAYVIVSEAGASVYSASELATKEYPDLDVTVRGAISIGRRLQDPLAELVKI 451
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ ++ + P + + V+ D N VG+D+N+A + L
Sbjct: 452 DPKAIGVGQ---------YQHDVAPKKLEESLAGVVEDSVNTVGVDLNIATP-----SLL 497
Query: 670 QFISGLGPRKAASLQRSLV----RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
ISG+ AS+ +++V G +RK+ + LG+K + GFLRV S +
Sbjct: 498 THISGIN----ASIAKNIVDYREEVGRFTSRKELLKVKRLGQKAYEQCAGFLRVDDSKEP 553
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEV-YNR-DIEGD-LND-DEDALEMAIEHVRDR 781
LD+T +HPESY +A++L + + YN+ D++ + L D DE A ++ + +
Sbjct: 554 ---------LDNTSVHPESYAIAKKLIELLGYNKEDLKNNKLGDIDERAQSQGLKKLSET 604
Query: 782 PDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE 841
++ + L D I +EL +D R + +P + +G E
Sbjct: 605 LEVGEMTLKD-----------------IIKELKKPGRDPREEMPKP------ILKTGIIE 641
Query: 842 -DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTC 900
L G V+ TVR V A + G++ K ++ + L D + GDI+
Sbjct: 642 LKDLKPGMVLAGTVRNVSDFGAFVDIGVHQDGLVHKSQMANRFVKHPL-DIVKVGDIVKV 700
Query: 901 KIKSIQKNRYQVFLVCRE 918
I + + R ++ L ++
Sbjct: 701 AILEVDEKRKRISLTMKD 718
>gi|125974456|ref|YP_001038366.1| RNA binding S1 [Clostridium thermocellum ATCC 27405]
gi|281418982|ref|ZP_06250000.1| Tex-like protein-like protein [Clostridium thermocellum JW20]
gi|125714681|gb|ABN53173.1| Tex-like protein-like protein [Clostridium thermocellum ATCC 27405]
gi|281407439|gb|EFB37699.1| Tex-like protein-like protein [Clostridium thermocellum JW20]
Length = 718
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 185/846 (21%), Positives = 346/846 (40%), Gaps = 177/846 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE + + ND R + H+ L + +L+ +
Sbjct: 32 IPFIARYRKE-------------ITGELNDQVLR----QLHERLIYLRNLEAR------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+EE RR+ DE +L I+ SLE A T REV+D+ F
Sbjct: 68 ------------KEEVRRLIDE-----QGKLTAEITASLEKATTLREVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A + G S+E + +P++
Sbjct: 106 ------------RPKRRTRATVAKEKGLEPLAEIIMAQELKTG---SIEDIAKPFINPEK 150
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
N+ + L GA + A +IS P +R VR +FM ++ + D
Sbjct: 151 E------------VNTVEDALNGAMDIIAEDISDNPHIRSIVRDVFMKQGMIVSKKKKDE 198
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
DS ++ F+ +P+ K + L I + E+E+ LQV I++PE++L
Sbjct: 199 DSVYRMYYDFS-------EPVAKIAGHRVLAINRGEKEEFLQVKIEVPEETL-------M 244
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
E + V + + ++ E L D+ + + PS+ +E R+ ++ A+ + + L
Sbjct: 245 EQLKAKLVKRPPSITSEYVEKALADSYERLIFPSVEREVRNELTENAEEQAIKVFATNLK 304
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCL 493
N + P + K P + ++D +G+V+D V++
Sbjct: 305 NLLLQPPVKGKT--------------VLGLDPAYRTGCKIAVVDETGKVLDTAVIYPTP- 349
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
Q+K + + ++K +++ H V + ++ S + +I+ + ++++E
Sbjct: 350 ---------PQNKVEEAKEIMKRLIEK--HGVDIISIGNGTASRESEIF--VAELLKEID 396
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
R V + + E+ +Y S++ +++ P ++ AV++ R LQ+PLA + +
Sbjct: 397 RKVYY-------MVVSEAGASVYSASKLGAEEFPDFDVALRSAVSIARRLQDPLAELVKI 449
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFIS 673
P S + ++ + ++ V+ D N VG+D+N A + L +IS
Sbjct: 450 -DPK----SIGVGQYQHDMNQKRLSETLQGVVEDCVNSVGVDLNTA-----SPSLLSYIS 499
Query: 674 GLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
G+ A ++ G R++ LG K F GFLR+ +
Sbjct: 500 GINSVIAKNIVEYRETNGKFKRREELKKVKKLGDKTFEQCAGFLRIPDGD---------N 550
Query: 734 LLDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
+LD+T +HPESY A++L ++V NR ++G + E +M +E V +
Sbjct: 551 VLDNTSVHPESYEAAKKLLDIMGYSLEDVKNRKLDGLV---EKVEKMGMEKVAREIGVGV 607
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
L D I +EL+ +D R++ +P + + + L
Sbjct: 608 PTLKD-----------------IIKELLKPGRDPRDELPKPMLLTDVLHL-----EDLRP 645
Query: 847 GRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQ 906
G ++ TVR V A + G++ + SD + S + D + GDI+ +I +
Sbjct: 646 GMILTGTVRNVADFGAFVDVGVHQDGLVHISELSDKYVKSPM-DVVSVGDIVKVRILDVD 704
Query: 907 KNRYQV 912
R ++
Sbjct: 705 VERKRI 710
>gi|340758051|ref|ZP_08694643.1| transcriptional accessory protein [Fusobacterium varium ATCC 27725]
gi|251836340|gb|EES64877.1| transcriptional accessory protein [Fusobacterium varium ATCC 27725]
Length = 721
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 202/873 (23%), Positives = 359/873 (41%), Gaps = 201/873 (23%)
Query: 72 LQKLD----IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+Q LD +PFI+ YRKE +N D+ E K+L + L
Sbjct: 23 MQLLDEGATVPFISRYRKEVT--------------ENLDEIE------IGKILETVTYLR 62
Query: 128 KKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDV 187
L+KRK EE R+ +E +L + I KS+E AE +EV+D+
Sbjct: 63 N----LEKRK------------EEVIRLIEE-----QGKLTEEIQKSIEIAEKLQEVEDI 101
Query: 188 DLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
+FP R KR TK + GL +A + S ++ +EK
Sbjct: 102 ------YFP-----------YRKKRKTKADVAKERGLEPLADEMMKLS---SMEKVMEKA 141
Query: 248 GDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
G+ + + T EE ++GA + A IS P R+ +R I + + +
Sbjct: 142 GEFITEEVPTVEE---------------AVEGAMLIIAQNISETPIYREQIREIMLKSGI 186
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS 367
+ T T + G + ++P+ K + L + + E+E +L V++ L E S
Sbjct: 187 LVTKETKKAKEL--DIKKVYGDYYEYKEPVSKIPPHRILAVNRGEKEDILSVSVTLDEMS 244
Query: 368 LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWL 427
N++ + + +L+ + ++ I+ D+LD +LPS+ +E R++++ +A+
Sbjct: 245 RNRVENLILKDFLNKNLKETYLK-------IIGDSLDRLILPSIEREVRNILTDKAELEA 297
Query: 428 LMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSG--EV 484
+ + + L N + P + K+ PG + ++D +G
Sbjct: 298 IAVFKENLKNLLMQAPLKEKN--------------ILALDPGYRTGCKVAVIDKNGFYRE 343
Query: 485 VDVLFTGCLTLRSQNVRDQQSKKNDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
DV F V + S K E R++++ ++ ++V+G N + + +
Sbjct: 344 KDVFFL---------VEEMHSPKQLAEAEKRIVEYAKKYEIDIIVIG--NGTASRETESF 392
Query: 542 YEIIFKMVEEHPRDVGHEMDELSIVY--GDESLPRLYENSRISSDQLPGQKGNVKRAVAL 599
+ K + LS+ Y +E+ +Y S+I++++ P V+ A+++
Sbjct: 393 VANVIK------------KNHLSVKYLIANEAGASIYSASKIAAEEFPDLDVTVRGAISI 440
Query: 600 GRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQ----VMVDVTNQ 651
GR +Q+PLA + + G G D G +++ V+ V N
Sbjct: 441 GRRVQDPLAELVKIDPKSIGVG-------------MYQHDVNQGRLDESLDSVITYVVNN 487
Query: 652 VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFV 711
VG ++N A W A L ISG+ A ++ G RK+ + G+G K +
Sbjct: 488 VGANLNTA---SW--ALLSHISGIKKNIAKNIVEYRKENGNFKNRKELLKVKGVGAKAYE 542
Query: 712 NAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV------YNRDIEGDLN 765
GFL V G+ ++LD+T IHPESY +A+E+ ++V Y D+ G
Sbjct: 543 QMAGFL-VIPDGE--------NVLDNTIIHPESYHIAKEILEKVGFTLENYREDLNG--- 590
Query: 766 DDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYK 825
R++ LK++ KEK E ET+ I + LI +D R+ ++
Sbjct: 591 ------------AREK---LKSFDYTSFAKEK--EYGVETVKDIYQSLIRDRRDPRDSFE 633
Query: 826 EPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRD 885
+P + I + L G ++ TVR V A + +L + S+ + D
Sbjct: 634 KPLLKSDILKI-----ENLQVGMEIEGTVRNVVKFGAFVDIGLKNDALLHISEISNKFID 688
Query: 886 SELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
S L G I+ +IK + K R +V L +E
Sbjct: 689 DP-SKVLSVGQIIKVRIKDVDKERERVALTKKE 720
>gi|302875853|ref|YP_003844486.1| Tex-like protein [Clostridium cellulovorans 743B]
gi|307689286|ref|ZP_07631732.1| Tex-like protein-like [Clostridium cellulovorans 743B]
gi|302578710|gb|ADL52722.1| Tex-like protein-like [Clostridium cellulovorans 743B]
Length = 719
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 185/865 (21%), Positives = 373/865 (43%), Gaps = 165/865 (19%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L++ ++ + +++L+ + +PFIA YRKE L ++ +N F
Sbjct: 9 ELNLKKEIVENVIEMLN-EGATVPFIARYRKERTGGLSDEVLRN---------F------ 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
+ ++++ + LQ+RK+A+ + I ++ +L L + ++
Sbjct: 53 -YERLIYLTN--------LQERKAAV-----------IKSIEEQGKLTL------ELKEA 86
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
++ A+T+ EV+D L+ P YK+ KR T+ + + GL +A YS
Sbjct: 87 IDNAKTQAEVED------LYRP----------YKQKKR-TRATIAVEKGLESLADIL-YS 128
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
GD D + E + K NS + +QGA + A +IS
Sbjct: 129 -------------GDFKADVRLKAAEFINEEKGV--NSEEEAIQGALDIIAEKISDNAEH 173
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
RK++R N +V T D + + ++ + ++ ++K + L I + E++
Sbjct: 174 RKWIRDFVYKNGIVETTGDSDEPTTYEMYYDY-------KEEVKKMPPHRILAINRGEKD 226
Query: 355 KLLQVTIKLPEDSLNKLFS--DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
K++ + + E+ + + + K + ++DG A ++D+L + PS+
Sbjct: 227 KVISIKVVSDEEKIITYLNNRELKNNTVTDGYVMEA----------IRDSLKRLIYPSIE 276
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KP 471
+E RS ++ + + + + + L + P + K + PG +
Sbjct: 277 REIRSTLTEKGEEGAIKIFKENLKALLMQAPIKGKT--------------VLGFDPGFRT 322
Query: 472 ETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN 531
+LD +G+++D T +T + ++ + ++ +L + ++ H V+ LG
Sbjct: 323 GCKIAVLDETGKILDT-HTAYVTSKG-----KEGLQEEKAKLKELILKHDVDVISLGNGT 376
Query: 532 LSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKG 591
S S EII ++++E ++G E+ V +E+ +Y S ++S + P
Sbjct: 377 ASRES-----EEIIAELLKEVKNEIGK---EIYYVIVNEAGASVYSASELASKEYPDINV 428
Query: 592 NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ 651
+++ A+++GR +Q+P+A + + P S + ++ +TP + ++ V+ D N
Sbjct: 429 SIRGAISIGRRMQDPMAELVKI-DPK----SIGVGQYQHDVTPKKLDESLKGVVEDSVNN 483
Query: 652 VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFV 711
VG+D+N A + L ++SG+ A ++ G +RK+ + LG K +
Sbjct: 484 VGVDLNTATP-----SLLSYVSGINSTIAQNIVDYRNENGKFSSRKEILKVKRLGPKAYE 538
Query: 712 NAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDAL 771
GFLRV S + LLD+T +HPESY ++L + L
Sbjct: 539 QCAGFLRVPESKE---------LLDNTSVHPESYDATKKLL----------------ELL 573
Query: 772 EMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQD- 830
I+ V +R + +D +KEK E E L + L+ ++ + ++P +D
Sbjct: 574 GYTIDQVNER----RIQDIDSKVKEKTIEKLSEGLGIGVPTLLDIIKELKKPGRDPREDM 629
Query: 831 EEFYMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELS 889
+ + SG E L G V++ TVR V A + G++ K + + + L
Sbjct: 630 PKPILKSGVIELSDLKPGMVLKGTVRNVADFGAFVDIGVHQDGLVHKSEMRNSFVKHPL- 688
Query: 890 DKLHEGDILTCKIKSIQKNRYQVFL 914
D + GDI+ KI + + R ++ L
Sbjct: 689 DVVKVGDIIDVKILEVDEKRRRIAL 713
>gi|332798167|ref|YP_004459666.1| Tex-like protein [Tepidanaerobacter acetatoxydans Re1]
gi|438001083|ref|YP_007270826.1| Transcription accessory protein (S1 RNA-binding domain)
[Tepidanaerobacter acetatoxydans Re1]
gi|332695902|gb|AEE90359.1| Tex-like protein [Tepidanaerobacter acetatoxydans Re1]
gi|432177877|emb|CCP24850.1| Transcription accessory protein (S1 RNA-binding domain)
[Tepidanaerobacter acetatoxydans Re1]
Length = 705
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 156/645 (24%), Positives = 278/645 (43%), Gaps = 132/645 (20%)
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D++ LL +R S L++ E+R+ L ++L I ++L+ A T +EV+D
Sbjct: 48 DEQLRLLFERLSYLRNL-------ETRKTEVVKLLEEMEKLTPEIRQNLDRALTLQEVED 100
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK 246
+ F RPKR T+ + + GL +A+K L+ E
Sbjct: 101 IYRPF-----------------RPKRRTRATIAREKGLEPLAAKI----------LAQED 133
Query: 247 MGDELEDPKETPEEMASNFKCAM-FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
M DE + +AS + + L GA + A +S + +RK +R
Sbjct: 134 MVDE--------QAIASFIDPQKGVATCEEALAGALDIIAEVVSDDAKIRKLIRDTAYKK 185
Query: 306 AVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE 365
+V T + S ++ F ++P++K + L I + E EK LQV I +P+
Sbjct: 186 GIVQTSGLTEETSTYSMYYDF-------KEPVQKIVSHRILAINRGEREKYLQVKILVPD 238
Query: 366 DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKS 425
D ++ S K Y+ + S + N ++DA + PS+ +E R++++ +A+
Sbjct: 239 D---EIISIIKAEYIKESSPTSHLMENA-----IEDAYKRLIWPSIEREIRNMLTEQAEE 290
Query: 426 WLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVV 485
L + K L + + P + RV+ + V++D+SG+++
Sbjct: 291 QALSTFSKNLKHLILQPPIKG-------------RVIMGFDPAYRTGCKIVVIDASGKLL 337
Query: 486 DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
+T C QN D+ K +L + ++ VV LG S S K +
Sbjct: 338 A--YTVCYPTPPQNKFDESKKI-----ILDLIEKYRVDVVSLGNGTASRESEK-----FL 385
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
++++E R V + V E+ +Y S++ +++ P + + AV++ R LQ+
Sbjct: 386 AEILKESSRPVSY-------VIVSEAGASVYSASKLGTEEFPNLDVSFRGAVSIARRLQD 438
Query: 606 PLAMVATL----CGPGR-------EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGL 654
PLA + + G G+ + LS KL G++E D N VG+
Sbjct: 439 PLAELVKIDPKSLGVGQYQHDVNQKRLSEKLS------------GVVE----DCVNSVGV 482
Query: 655 DINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAV 714
D+N A + L ++SG+ A+++ + G +RK+F+ LG K F
Sbjct: 483 DVNTA-----SPSLLGYVSGITASTASNIVKYREENGMFKSRKEFLKVPKLGPKTFEQCA 537
Query: 715 GFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD 759
GFLRV S ++LD+T +HPESY +A+++ K +Y D
Sbjct: 538 GFLRVPESS---------NILDNTAVHPESYDIAEKIMK-LYTLD 572
>gi|383453299|ref|YP_005367288.1| S1 RNA-binding domain-containing protein [Corallococcus coralloides
DSM 2259]
gi|380734996|gb|AFE10998.1| S1 RNA-binding domain-containing protein [Corallococcus coralloides
DSM 2259]
Length = 767
Score = 120 bits (301), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 171/706 (24%), Positives = 295/706 (41%), Gaps = 142/706 (20%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+L I + + R L LH + +PFIA YRKE L++ ++ + + ER
Sbjct: 9 AQELGIKPEQVDRTL-ALHEEGGTVPFIARYRKEAT----GGLDEVQIQSILDKATERA- 62
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
+LD + R + L+S EE+ + L +S
Sbjct: 63 ------------ELDGR------RDTILRSI-----EEQGK-------------LTPELS 86
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
K+L+AA T E++D L+ P YK PKR T+ + + GL +A
Sbjct: 87 KALQAARTRAELED------LYLP----------YK-PKRRTRAAIAREKGLEPLADLVW 129
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
Q G L D + P A + + +QA L GAR + A ++ +
Sbjct: 130 KQEGQRGENL----------DARVKPYVSADK---GVADVAQA-LAGARDICAERVAEDA 175
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAE 352
+R+ R + + + P F + G E+PL + + L + + E
Sbjct: 176 KLRREARDLCTRRGTLRSDVVPAKKGETTKFENYYG----HEEPLSQAPSHRVLALLRGE 231
Query: 353 EEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
EE +L+V + LP+D + LF+ V++ L+ + ++D D + PS+
Sbjct: 232 EEGVLKVKLGLPDDEVKGLFT-------GRVVTRPQSLFAGELRAAVEDGWDRLMGPSLE 284
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KP 471
E R+ + RA + +G+ L + + P A VLA PG +
Sbjct: 285 SELRAELKERADKGAIGVFGENLRHLLLAAPA------------GARAVLA--LDPGLRT 330
Query: 472 ETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMM-DHQPHVVVLGAV 530
VMLD++G VV+ TL S+ D++++ +LL+ ++ H+P ++ +G
Sbjct: 331 GIKLVMLDATGTVVE-----TTTLYSERSADERARAA---KLLEAVVRKHKPELIAVGNG 382
Query: 531 NLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD-ELSIVYGDESLPRLYENSRISSDQLPGQ 589
S + E RD M ++ +V E +Y S ++ ++ P
Sbjct: 383 TGS-------------REAEVFTRDTLKAMGVQVPVVSVSEQGASIYSASEVAREEFPEL 429
Query: 590 KGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+++ AV++GR LQ+PLA + + + ++ + L +K G +V+
Sbjct: 430 DVSLRGAVSIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQGLL--KKKLG---EVVDSCV 484
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+D+N A Q L+ +SG+GP A L G TR++ + GLG K
Sbjct: 485 NAVGVDVNTA---SPQL--LEHVSGVGPSLAKKLVAHRAAKGRFTTRRELLKVSGLGPKT 539
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
F A GFLRVR + LD + +HPE Y + + +AK++
Sbjct: 540 FEQAAGFLRVRGP----------EPLDSSAVHPERYTVVERMAKDL 575
>gi|440300214|gb|ELP92703.1| suppressor of ty, putative [Entamoeba invadens IP1]
Length = 1227
Score = 120 bits (300), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 247/1181 (20%), Positives = 480/1181 (40%), Gaps = 173/1181 (14%)
Query: 17 PTDGESI-----VDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMR-FLDLL 70
PT GE + +DES W+ +L L I D++++ +L+
Sbjct: 176 PTMGEDVWQNKMLDESYWVCQRLQLEILMNV---------------IDLDNLVKKVFELM 220
Query: 71 HLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKW 130
+ ++ D+ FIA Y K+ + ++++ K ++LW I DLD ++
Sbjct: 221 YKERHDLMFIATYDKDVYYPFI------------SENWRSIEHAKVIQLLWQIWDLDTEY 268
Query: 131 LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAETEREVDDV 187
+ ++K E+ R+I DE ++ ++ + + + D+V
Sbjct: 269 YEICEKK------------EKVRKIIDECSTMGTEERAGYLITLDTLQDEIDFQLLSDEV 316
Query: 188 DLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
LK++ +F G+ P+ CSK + E+ +G + + L
Sbjct: 317 SLKYSPNFFDPLKDASRGKRTYPE------VCSK-NVEELMKGYGITPKCFVDNLVNNYK 369
Query: 248 GDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
E PE+++ + +Q V+ AR A E S RK + + ++
Sbjct: 370 QYVPNKCYEKPEDISRRLITSEMPKTQNVMNTARMRFATEFSHFKETRKLFYELALRDST 429
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKP---LRKFEDAQWLLIQKAEEEKLLQVTIKLP 364
+ST PT G ID F+++A K L KP LR+ +D L I +AE+E L+ V + +P
Sbjct: 430 ISTKPTEKGKEVIDVFNKYAIYKRLVGKPVSLLRERDDI--LKIFQAEKEGLITVELNMP 487
Query: 365 ----EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMS 420
ED+ KL SD + + W ++ ++ A ++ P +++ + +
Sbjct: 488 TGIIEDACTKLIG-------SDDIDE----WRSMKKETVEFAFKYYITPYVIEHLKETLR 536
Query: 421 GRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP--GKPETTFVML 478
A ++ E L +++ P+ N +E +P V G GK FV
Sbjct: 537 KNAVKCVVREAQINLKRRINGAPHFALGNKKRQIDETSPLVNYFVGGIVFGKESMMFVKC 596
Query: 479 DS-SGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
++ SGE + ++ + ++ +E LL + P + + T+L
Sbjct: 597 NADSGEFTESMYFERFVQQFDKYEEEIKNFFGEETLLIGVEAKTPKSIFM------LTNL 650
Query: 538 KDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA- 596
H+M+++ V ++ L +Y+ + G+K ++ A
Sbjct: 651 --------------------HKMNKIENVNVNKDLGIIYKTETV------GEKSQLEYAG 684
Query: 597 VALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI---EQVMVDVTNQVG 653
++ R L NP+A +CG ++L+ K+ PL+ L E+ ++ ++ +++V N G
Sbjct: 685 SSVCRQLINPMAEFVHICGKREKMLNVKIHPLQYALNEGERSTLVHKLQETLIEVVNLRG 744
Query: 654 LDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV-RAGAIFTRKDFVTAHGLG--KKVF 710
+DIN I L +++GLG KA + R + I +RK + + + V
Sbjct: 745 VDINKCIDHGHIEDVLSYVNGLGEIKANTFIRKMQGYQFHINSRKFLIEMYKDDNMENVV 804
Query: 711 VNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA 770
N VGF+ + S + + + F LD TR+HP +Y LA+ + + Y EGDL E
Sbjct: 805 NNFVGFITI--SPKDSVKNLF---LDQTRVHPMNYQLAENIVNDAY----EGDLEKAE-F 854
Query: 771 LEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYL--IRRELIHGFQDWRNQYKEPS 828
+ A+ R++ D L D + + K +K+ + L I EL+ F Y +PS
Sbjct: 855 CKKAMSMTREKYDSLD---FDGYAELIKEGDKKMDVCLRDIVDELVDPF-----MYNQPS 906
Query: 829 -------QDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSD 881
E F ++ + D ++++ +R + + L M+
Sbjct: 907 FAESTLTDREMFECVTNTSVDDFKACQLIEFVLRPGPRDKKRGFISDDLEVMV------- 959
Query: 882 DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRY--QHCQNLDPYYHEE 939
D + G ++T KI ++ ++ + + C + ++R+ Y + + L Y E+
Sbjct: 960 --EDGNCLNGDEFGKLVTGKITTVDYSKCVINVKCNQPDVRDFSYLREEYEKLKSY--EK 1015
Query: 940 RSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRG 999
+E+ R +E + + + FQ ++ +A+ + + G ++ P +
Sbjct: 1016 YLEVTNEEINYRSSEEGRNIDYNNWVSSYRNFQIMSHSKAVTEVKKGKVGGWMVIPIAED 1075
Query: 1000 PSY---LTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRY 1056
+ L L K V + E D D+K + + + F+ L ++ Y
Sbjct: 1076 GLFQGKLMLVWKWTTEVLMNIPCYERKDDRGDMK--------IMMYKRPFDGLSH-LEHY 1126
Query: 1057 IDPLVSHLKAMLSYRKFRKG-SKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI 1115
I+ + L+ + +R++ SK +VD L +KAE P Y +S G + I
Sbjct: 1127 INKVNGLLEELRKHRRYHANDSKVDVD--LSKQKAELPNAFHYSLSVSKTEFGKIRIASI 1184
Query: 1116 R-STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1155
S ++ L GF K + ++ LV F+ + +
Sbjct: 1185 PGSKTVSSLFVRLDDNGFHLGKTTYSSVELLVDEFKNRVQN 1225
>gi|405355350|ref|ZP_11024576.1| S1 RNA binding domain protein [Chondromyces apiculatus DSM 436]
gi|397091692|gb|EJJ22494.1| S1 RNA binding domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 780
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 178/776 (22%), Positives = 322/776 (41%), Gaps = 127/776 (16%)
Query: 146 KRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVD 203
+R E ++RR D ++ +Q L +SK+L+AA+T E++D L+ P
Sbjct: 60 ERAELDARR--DTILRSIEEQGKLTPELSKALKAAKTRTELED------LYLP------- 104
Query: 204 EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMAS 263
YK PKR T+ + + GL +A + G ++ ++ + K+ P++ +
Sbjct: 105 ---YK-PKRRTRAAIARERGLEPLADLLWKQDGRRGEDVA-SRVRPYINPEKDVPDQAVA 159
Query: 264 NFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSF 323
L GAR + A ++ + +R+ R + V + P F
Sbjct: 160 -------------LAGARDICAERVAEDAGLRREAREMSARRGTVRSDVVPAKKGETTKF 206
Query: 324 HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ G E+PL + + L + + EEE +L+V + LP+D + S
Sbjct: 207 ENYYG----HEEPLTQAPSHRVLALLRGEEEGVLKVKLSLPDDEVKSFLS-------GRV 255
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
V+K L+ + ++D+ D + PS+ E R+ + RA + +G+ L + + P
Sbjct: 256 VTKPQSLFAQELRAAVEDSWDRLMGPSLEAELRAELKERADKQAIGVFGENLRHLLLAPP 315
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
A VLA PG + T M+D +G+VV+ +TL S+ D
Sbjct: 316 A------------GARAVLA--LDPGLRTGTKLAMMDVTGKVVE-----TVTLYSERGAD 356
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM-D 561
++++ + + H+P ++ +G S + E RD +
Sbjct: 357 ERARAAKLLAAV--VQKHKPELIAVGNGTGS-------------REAEVFARDTLKALGS 401
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREIL 621
+ +V E +Y S ++ D+ P +++ AV++GR LQ+PLA + + +
Sbjct: 402 QTPVVSVSEQGASIYSASEVARDEFPDLDVSLRGAVSIGRRLQDPLAELVKIDPKSIGVG 461
Query: 622 SWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAA 681
++ + L +K G +V+ N VG+D+N A Q L+ +SG+GP A
Sbjct: 462 QYQHDVDQGLLK--KKLG---EVVDSCVNAVGVDVNTA---SPQL--LEHVSGVGPSLAK 511
Query: 682 SLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIH 741
L G TR++ + GLG K F A GFLRVR S + LD + +H
Sbjct: 512 KLVAHRAAKGRFTTRRELLKVSGLGPKTFEQAAGFLRVRGS----------EPLDASAVH 561
Query: 742 PESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKREN 801
PE Y + + +AK+ L +A+ + +L++ R++ E
Sbjct: 562 PERYAVVERMAKD----------------LGVAVGALVGNAELVRKIDPKRYLGADLGEL 605
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQR 861
TL I EL +D R + P E+ + + + EG V+Q V V
Sbjct: 606 ---TLKDILAELEKPSRDPRGDFTAPQLREDLRSL-----EDVKEGMVLQGVVTNVTAFG 657
Query: 862 AICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
A + G++ S + + S+ + GD LT ++ ++ R ++ L R
Sbjct: 658 AFVDVGVHQDGLVHVSQISTRFV-KDPSEVVKVGDRLTVRVLTVDLARKRLALSVR 712
>gi|442318420|ref|YP_007358441.1| S1 RNA-binding domain-containing protein [Myxococcus stipitatus DSM
14675]
gi|441486062|gb|AGC42757.1| S1 RNA-binding domain-containing protein [Myxococcus stipitatus DSM
14675]
Length = 789
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 184/789 (23%), Positives = 325/789 (41%), Gaps = 147/789 (18%)
Query: 146 KRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVD 203
+R E +SRR D ++ +Q L ++K+L+AA+T E++D+ L +
Sbjct: 60 ERTELDSRR--DTILRSVEEQGKLTPELAKALKAAKTRTELEDLYLPY------------ 105
Query: 204 EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMAS 263
RPKR T+ + + GL +A L ++ G ED +
Sbjct: 106 -----RPKRRTRAAIARERGLEPLAD------------LLWKQDGKRGED---------A 139
Query: 264 NFKCAMFNSSQ-------AVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+ K F +++ A L GAR + A +S + +R+ R + + + P
Sbjct: 140 DAKVRAFVNAEKDVPDLAAALAGARDICAERVSEDAGLRRESREVCAKRGSLRSDVVPAK 199
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ F + G E+PL + + L + + EEE +L+V + +P+D + L S
Sbjct: 200 KNEPTKFENYYG----HEEPLSQAPSHRVLALLRGEEEGVLKVKLNMPDDEVKALLS--- 252
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
S V++ L+ + ++D + + PS+ E R+ + RA + +G+ L
Sbjct: 253 ----SRIVTRPQSLFAQELRAAVEDGWERLMGPSLESELRAELKERADKGAIGVFGENLR 308
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
+ + P A VLA PG + MLD++G V + LTL
Sbjct: 309 HLLLTAPA------------GARAVLA--LDPGLRTGIKLAMLDNTGSVAE-----TLTL 349
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
S+ D++ + + L+ + H+P ++ +G S + E RD
Sbjct: 350 YSERSADERVRA--AKLLVAVVQKHKPELIAVGNGTGS-------------REAETFVRD 394
Query: 556 VGHEMD-ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
+ ++ +V E +Y S ++ D+ P +++ AV++GR LQ+PLA + +
Sbjct: 395 TLKALGVQVPVVSVSEQGASIYSASEVARDEFPDMDVSLRGAVSIGRRLQDPLAELVKID 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
+ ++ + L +K G +V+ N VG+D+N A Q L+ +SG
Sbjct: 455 PKSIGVGQYQHDVDQGLLK--KKLG---EVVDSCVNAVGVDVNTA---SPQL--LEHVSG 504
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
+GP A L G TR++ + GLG K F A GFLRV +
Sbjct: 505 VGPSLAKKLVAHRASKGRFTTRRELLKVSGLGPKTFEQAAGFLRVNGP----------EP 554
Query: 735 LDDTRIHPESYGLAQELAKE--VYNRDIEGDLNDDEDALEMAIEHVRDR-PDLLKTYLLD 791
LD + +HPE Y + + +AK+ V R + G+ AL I+ R PDL + L D
Sbjct: 555 LDSSAVHPERYAVVERMAKDLGVEVRALVGNA-----ALVRKIDPKRYLGPDLGELTLKD 609
Query: 792 RHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQ 851
I EL +D R + P ++ T + + EG V+Q
Sbjct: 610 -----------------ILAELEKPSRDPRGDFTAPVMRDDL-----RTLEDVKEGMVLQ 647
Query: 852 ATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQ 911
V V A + G++ S + + S+ + GD LT ++ S+ R +
Sbjct: 648 GVVTNVTAFGAFVDVGVHQDGLVHVSQISTKFV-KDPSEVVKVGDRLTVRVLSVDLARKR 706
Query: 912 VFLVCRESE 920
+ L R ++
Sbjct: 707 LALSVRAAQ 715
>gi|373497897|ref|ZP_09588413.1| competence protein ComEA helix-hairpin-helix repeat region
[Fusobacterium sp. 12_1B]
gi|404367835|ref|ZP_10973197.1| competence protein ComEA helix-hairpin-helix repeat region
[Fusobacterium ulcerans ATCC 49185]
gi|313688927|gb|EFS25762.1| competence protein ComEA helix-hairpin-helix repeat region
[Fusobacterium ulcerans ATCC 49185]
gi|371962419|gb|EHO80020.1| competence protein ComEA helix-hairpin-helix repeat region
[Fusobacterium sp. 12_1B]
Length = 721
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 182/792 (22%), Positives = 336/792 (42%), Gaps = 154/792 (19%)
Query: 145 KKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDE 204
+KR EE R I ++ +L + I KS+EAAE +EV+D+ +FP
Sbjct: 65 EKRKEEVIRLIEEQGKLT------EEIQKSVEAAEKLQEVEDI------YFP-------- 104
Query: 205 GQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASN 264
R KR TK + GL +A + + ++ +EK + + + TPEE
Sbjct: 105 ---YRKKRKTKADVAKERGLEPLADEM---MKLPSMEKVMEKAQEFITEEVPTPEE---- 154
Query: 265 FKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFH 324
++GA + A IS P R+ +R I + + ++ T T
Sbjct: 155 -----------AVEGAMLIIAQNISETPVYREQIREIMLKSGILVTKETKKAKEL--DVK 201
Query: 325 QFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGV 384
+ G + ++P+ K + L + + E+E +L V++ L E S +++ + ++L+ +
Sbjct: 202 KVYGDYYEYKEPVSKMPPHRILAVNRGEKEDILSVSVTLDEMSRSRVETLILRNFLNKNL 261
Query: 385 SKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY 444
K L I+ D+LD +LPS+ +E R++++ +A+ + + + L N + P
Sbjct: 262 -KETYLK------IIGDSLDRLILPSIEREVRNILTDKAELEAIAVFKENLKNLLMQAPL 314
Query: 445 QRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCLTLRSQNVR 501
+ K PG + ++D +G + DV F + +
Sbjct: 315 KEKS--------------VLALDPGYRTGCKVAVIDRNGFYIEKDVFFL------VEEMH 354
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
+ ++R++ ++ ++ ++V+G N + + + + K +
Sbjct: 355 SPRQLAEAEKRIVDYVKKYEIDIIVIG--NGTASRETESFVANVIK------------KN 400
Query: 562 ELSIVY--GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CG 615
LS Y +E+ +Y S+I++++ P V+ A+++GR +Q+PLA + + G
Sbjct: 401 HLSAKYLIANEAGASIYSASKIAAEEFPDLDVTVRGAISIGRRVQDPLAELVKIDPKSIG 460
Query: 616 PG---REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFI 672
G ++ +L DE ++ V+ V N VG ++N A W A L I
Sbjct: 461 VGMYQHDVNQGRL---------DES---LDSVITYVVNNVGANLNTA---SW--ALLSHI 503
Query: 673 SGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
SG+ A ++ G RK + G+G K + GFL V G+
Sbjct: 504 SGIKKNIAKNIVDYRKENGNFGNRKQLLKVKGVGAKAYEQMAGFL-VIPEGE-------- 554
Query: 733 DLLDDTRIHPESYGLAQELAKEV------YNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
++LD+T IHPESY +A+E+ ++V Y D+ G R++ LK
Sbjct: 555 NVLDNTIIHPESYHIAKEILEKVGFTLENYREDLNG---------------AREK---LK 596
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
++ KEK E ET+ I + LI +D R+ +++P + I + L
Sbjct: 597 SFDYTSFAKEK--EYGVETVKDIYQSLIRDRRDPRDSFEKPLLKSDILKI-----ENLKV 649
Query: 847 GRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQ 906
G ++ TVR V A + +L + S+ + D S L G I+ +IK +
Sbjct: 650 GMEIEGTVRNVVKFGAFVDIGLKNDALLHISEISNKFIDDP-SKVLSVGQIIKVRIKDVD 708
Query: 907 KNRYQVFLVCRE 918
K R +V L +E
Sbjct: 709 KERERVALTKKE 720
>gi|410729106|ref|ZP_11367190.1| transcriptional accessory protein [Clostridium sp. Maddingley
MBC34-26]
gi|410596229|gb|EKQ50911.1| transcriptional accessory protein [Clostridium sp. Maddingley
MBC34-26]
Length = 725
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 189/799 (23%), Positives = 343/799 (42%), Gaps = 148/799 (18%)
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLF-DSISKSLEAAETEREVDDVDLKFNLH 194
RK + + Y + EE R D RL Q+ F D I K+LE A T EV+D+ F
Sbjct: 52 RKLSERLTYLRNLEE---RKADVKRLIQEQEKFTDEIGKALENATTLTEVEDIYRPF--- 105
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE-KMGDELED 253
+PK+ TK + ++ GL A +L LE K +LE+
Sbjct: 106 --------------KPKKRTKATIATEKGLKPFA------------ELILEGKFSGDLEE 139
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
E + ++ A SS+ +QGA + A IS E RKY+R + + + +
Sbjct: 140 --EAAKYISEEKGVA---SSEEAIQGALDIIAENISDEAKYRKYIREFVIREGNIESKGS 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+ + + +++++ + + K + L I + E+EK+L V I + ED +
Sbjct: 195 SEEPTPYEMYYEYS-------EAVNKIPPHRILAINRGEKEKILSVKITVNEDKII---- 243
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
YL + + K + +++ +L ++D+L + PS+ +E RS ++ + + + +
Sbjct: 244 ----QYLENQILKGNAVLDEKLKLAVRDSLKRLIYPSIEREIRSELTDIGEEGAIKIFKE 299
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L + P + K + + PG + +LD +G+
Sbjct: 300 NLKALLLQAPIKGK--------------VVMGFDPGFRTGCKVAILDETGKF-------- 337
Query: 493 LTLRSQNVRDQQSKKNDQ--ERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
L + V KK+ + +R LK ++ H V+ LG S S +I +M+
Sbjct: 338 --LENTAVYPTLPKKDIEGTKRTLKALIARHNVDVISLGNGTASRES-----EAVIAEMI 390
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
E + G E L+ V E+ +Y S +++ + P V+ A+++GR LQ+PLA
Sbjct: 391 TEIKNETGRE---LAYVIVSEAGASVYSASELATKEYPDLDVTVRGAISIGRRLQDPLAE 447
Query: 610 VATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ + G G+ ++ +TP + + V+ D N VG+D+N+A
Sbjct: 448 LVKIDPKAIGVGQ---------YQHDVTPKKLEESLAGVVEDSVNTVGVDLNIATP---- 494
Query: 666 FAPLQFISGLGPRKAASLQRSLV----RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRR 721
+ L ISG+ AS+ +++V G +RK+ + LG+K + GFLRV
Sbjct: 495 -SLLTHISGIN----ASIAKNIVDYREEVGHFTSRKELLKVKRLGQKAYEQCAGFLRVDD 549
Query: 722 SGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRD 780
S + LD+T +HPESY +A++L + + YN++ DL +++ + + +
Sbjct: 550 SKEP---------LDNTAVHPESYDIAKKLIEVLGYNKE---DLKNNK------LGDIDE 591
Query: 781 RPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
R + L + E TL I +EL +D R + +P + +G
Sbjct: 592 RAETQGLKKLSETL-----EVGEMTLKDIIKELKKPGRDPREEMPKP------ILKTGII 640
Query: 841 E-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILT 899
E L G V+ TVR V A + G++ K ++ + L D + GDI+
Sbjct: 641 ELKDLKPGMVLAGTVRNVSDFGAFVDIGVHQDGLVHKSQLANRFVKHPL-DIVKVGDIVK 699
Query: 900 CKIKSIQKNRYQVFLVCRE 918
I + + R ++ L ++
Sbjct: 700 VAILEVDEKRKRISLTMKD 718
>gi|402582415|gb|EJW76361.1| hypothetical protein WUBG_12730, partial [Wuchereria bancrofti]
Length = 473
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 187/437 (42%), Gaps = 67/437 (15%)
Query: 26 ESTWIY-----NQLLSGTLPLFGQ-RGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPF 79
E+ WIY N L + L Q R E + + D I L + Q ++PF
Sbjct: 69 EAKWIYQYAFDNATLKKAVSLCCQIRIFVLMNERKIAAEAPDKIKEALKFIRNQLFEVPF 128
Query: 80 IAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
IA YRKE S L V ND LW ++ D+KW LQ+RK
Sbjct: 129 IAFYRKEYVESCL-------VIND----------------LWKVYQWDEKWCHLQQRKKR 165
Query: 140 LQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPP 197
L K+ Y+ E+ R+ Q + + +T + DV KF L++ P
Sbjct: 166 LLELMKRMLNYQMENDNAAG-MRIVTEQDM-----NEVHGVQTVEGLMDVSTKFQLYYGP 219
Query: 198 ------------------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLG 239
E E +++ R+ KY C + GL +AS+FG + Q
Sbjct: 220 EVPKMIDWEKIQNLSEDDPEREAAEMRFRAATRTDKYMLCIQNGLSGMASRFGLTPLQFA 279
Query: 240 LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR 299
L K D ++D +E P + A + C F +S+AVL GA H+ A ++S EP VR+ +R
Sbjct: 280 ENLDW-KRHDIVQDDEE-PLKAAEQYVCQSFPTSEAVLTGAIHVVAKQLSREPKVRELLR 337
Query: 300 SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQV 359
+ +S CPT G ID H+ +++R+KP+ ++L +A LL +
Sbjct: 338 LRYRLRLKISVCPTKKGREEIDENHKLWPRRYVRDKPVANLRHDEYLWYVQAHASGLLNL 397
Query: 360 T--------IKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
I+ + L + S+ + Y D S+ +WN RE + ++NFLLP
Sbjct: 398 KLHCDTEEDIRFEKTMLQEFLSE--QPYHRDEYSRVVDMWNKIREEAVTVCVNNFLLPVF 455
Query: 412 VKEARSLMSGRAKSWLL 428
+EA + AK +++
Sbjct: 456 EREAHERLLQEAKDYVI 472
>gi|26337861|dbj|BAC32616.1| unnamed protein product [Mus musculus]
Length = 368
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 99/172 (57%), Gaps = 8/172 (4%)
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVD 1054
PSS+G ++LT+T KV G+Y H D+ E GK++ +G TL I + FEDLDE+V
Sbjct: 1 PSSKGENHLTVTWKVSAGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEIVA 55
Query: 1055 RYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFI 1111
RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG F+
Sbjct: 56 RYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFL 115
Query: 1112 LTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPS 1163
L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS
Sbjct: 116 LGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVQGITPS 167
>gi|340749641|ref|ZP_08686494.1| transcription accessory protein [Fusobacterium mortiferum ATCC
9817]
gi|229421473|gb|EEO36520.1| transcription accessory protein [Fusobacterium mortiferum ATCC
9817]
Length = 721
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 211/871 (24%), Positives = 354/871 (40%), Gaps = 197/871 (22%)
Query: 72 LQKLD----IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+Q LD IPFIA YRKE V N N D+ E K+L +
Sbjct: 23 MQLLDEGATIPFIARYRKE-------------VTN-NLDEIE------IGKILETV---- 58
Query: 128 KKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDV 187
Q +KR EE R I ++ +L D I KS+ A +EV+D+
Sbjct: 59 -----------TYQRSLEKRKEEVIRLIEEQGKLT------DEIVKSVALATKLQEVEDI 101
Query: 188 DLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
+FP R KR TK + + GL +A+ Y E L + +EK
Sbjct: 102 ------YFP-----------YRKKRKTKADTAKERGLEPLAN---YMLEALSNEDVIEK- 140
Query: 248 GDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
A F S + ++GA + A IS P R+ +R I + +
Sbjct: 141 --------------AREFITEEVPSVEEAVEGAMLILAQNISETPTYREQIREIMLTKGI 186
Query: 308 VSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK 362
++T + D ++Q+ +P+ K + L + + E E++L V+I+
Sbjct: 187 IATKESKKARELDIKKVYSDYYQY-------NEPISKMPSHRILAVNRGESEEVLTVSIE 239
Query: 363 LPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
ED + + L D +K+ Q D + I+ DALD +LPS+ +E R++++ +
Sbjct: 240 F-EDEIR---IRVERVILKDFKNKNLQ---DTYQKIVVDALDRLILPSIEREVRNILTDK 292
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSS 481
A+ + + + L N + P + K PG + ++D +
Sbjct: 293 AEEEAIKVFKENLKNLLMQAPLKEKS--------------ILALDPGYRTGCKVAIIDKN 338
Query: 482 GEVV--DVLFTGCLTLRSQNVRDQQSKK---NDQERLLKFMMDHQPHVVVLGAVNLSCTS 536
G + DV F V D + K +++++ ++ + ++V+G S
Sbjct: 339 GFYIGNDVFFL---------VADMHTPKQLETAEKKIVDYVKKYNIDIIVIGNGTAS--- 386
Query: 537 LKDDIYEIIFKMVEEHPRDVGHEMDELSIVY--GDESLPRLYENSRISSDQLPGQKGNVK 594
+ E DV + + L+ Y +E+ +Y S+I++++ P V+
Sbjct: 387 ----------RETESFVADVIRK-NNLNTKYLIANEAGASIYSASKIAAEEFPDLDVTVR 435
Query: 595 RAVALGRYLQNPLAMVATL----CGPG---REILSWKLCPLENFLTPDEKYGMIEQVMVD 647
A+++GR +Q+PLA + + G G ++ KL DE ++ V+
Sbjct: 436 GAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQGKL---------DES---LDAVIAY 483
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGK 707
V N VG ++N A W A L ISG+ A ++ G RK+ + G+G
Sbjct: 484 VVNSVGANLNTA---SW--ALLSHISGIKKNMAKNIVDYRKENGNFKNRKELLKVKGIGA 538
Query: 708 KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDD 767
K + GFL V G+ ++LD+T IHPESY A EL E L D
Sbjct: 539 KAYEQMAGFL-VIVDGE--------NVLDNTIIHPESYHKAIELLA-------ESGLTVD 582
Query: 768 EDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEP 827
E ++ + R++ LK + + KEK E ET+ I LI +D R+ +++P
Sbjct: 583 EYGADLNV--AREK---LKEFDYAKFAKEK--EYGVETVKDIYEALIRDRRDPRDSFEKP 635
Query: 828 SQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSE 887
+ I + L G ++ TVR V A + +L + S+ + D
Sbjct: 636 LLKSDILKI-----ENLQPGMEIEGTVRNVVKFGAFIDIGLKNDALLHISEISNKFIDDP 690
Query: 888 LSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
S L G I+ +IK I K R +V L +E
Sbjct: 691 -SKVLSVGQIIKVRIKDIDKERERVGLTKKE 720
>gi|404369860|ref|ZP_10975187.1| hypothetical protein CSBG_02840 [Clostridium sp. 7_2_43FAA]
gi|226914013|gb|EEH99214.1| hypothetical protein CSBG_02840 [Clostridium sp. 7_2_43FAA]
Length = 724
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 191/856 (22%), Positives = 364/856 (42%), Gaps = 183/856 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFI+ YRKE+ +L +D+ R K+ + L + +L
Sbjct: 32 VPFISRYRKEQTGAL-------------SDEVLR----KFQERLIYLRNL---------- 64
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K +E+ R+ DE +L D I K+LEA++T EV+D+ +
Sbjct: 65 ---------KERKEDVLRLIDE-----QGKLNDDIVKALEASKTLTEVEDI-------YR 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
P YK+ KR T+ + + GL +A SS + L+ E + K
Sbjct: 104 P---------YKQKKR-TRATMALERGLKPLADII--SSGEFNADLNSEAL-------KF 144
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE NS + + GA + A EIS E RK++R + + + D
Sbjct: 145 IDEEKG-------VNSKEDAINGALDIIAEEISDEAKYRKWIRELVFKEGKIQSTGESDE 197
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ + ++ ++ + + K + L I + E+EK+L V I + E+ K+ S
Sbjct: 198 HTPFEMYYDYS-------EEVAKIPPHRILAINRGEKEKVLSVKIAVNEE---KIIS--- 244
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
YL + + K+ + ++ +L ++D+L + PS+ +E RS ++ + + + + L
Sbjct: 245 --YLENEILKNNNITDEYLKLAIRDSLKRLIYPSIEREVRSELTNIGEEGAIKIFKENLK 302
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCL 493
+ P + K + + PG + +LDS+G +D ++
Sbjct: 303 ALLMQPPIKGK--------------VVMGYDPGFRTGCKIAILDSTGRFLDKSTVYPTA- 347
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
Q+K + + +LK +++ + V+ LG S S E++ +++ E
Sbjct: 348 ---------PQNKVKETKDILKDLINKYDVEVISLGNGTASRES-----EEVVSEIISEV 393
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
++ G E ++ V E+ +Y S +++ + P V+ A+++GR LQ+P+A +
Sbjct: 394 KKETGKE---IAYVIVSEAGASVYSASELATKEYPDLDVTVRGAISIGRRLQDPMAELVK 450
Query: 613 LCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFI 672
+ + + ++ +TP ++ V+ D N+VG+D+N A + L ++
Sbjct: 451 IDPKALGVGQY-----QHDVTPKRLDESLKGVVEDSVNKVGVDLNTATP-----SLLTYV 500
Query: 673 SGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
+G+ A ++ AG RK+ + LG+K + GFLRV S +
Sbjct: 501 AGINSSIANNIVIYRDEAGGFKNRKELLKVKRLGQKAYEQCAGFLRVMESNEP------- 553
Query: 733 DLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
LD+T +HPESY A+ L + + Y ++ DL ++ +++D +D
Sbjct: 554 --LDNTSVHPESYEAARNLIQLLGYTKE---DLKEN---------NLKD---------ID 590
Query: 792 RHIKEKKRENKRETLYLIRRELIHG---FQDWRNQYKEPSQD--EEF---YMISGETE-D 842
+K+K N I +EL G D + K+P +D EE + +G +
Sbjct: 591 ERVKDKGISN-------ISKELEIGELTLSDIIKELKKPGRDPREEMPKPILKTGVIDLK 643
Query: 843 TLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKI 902
L+EG ++ TVR V A + G++ K ++ + L D + GDI+ KI
Sbjct: 644 DLSEGMILMGTVRNVSDFGAFVDIGVHQDGLVHKSQMANRFVKHPL-DVVKVGDIVKVKI 702
Query: 903 KSIQKNRYQVFLVCRE 918
+ R ++ L ++
Sbjct: 703 LEVDSKRNRISLSMKD 718
>gi|325106225|ref|YP_004275879.1| Tex-like protein [Pedobacter saltans DSM 12145]
gi|324975073|gb|ADY54057.1| Tex-like protein [Pedobacter saltans DSM 12145]
Length = 754
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 167/717 (23%), Positives = 291/717 (40%), Gaps = 170/717 (23%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+LS+ + L+LL + +PFI+ YRKE SL D+ + T
Sbjct: 10 AQELSVGSKQVSATLNLLD-EGATVPFISRYRKELTGSL--------------DEVQVT- 53
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
AI D ++ L KR+ A+ K EE+ + L D++
Sbjct: 54 ---------AIRDRIQQLRELDKRREAIL----KSIEEQGK-------------LTDALK 87
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
+EAAET ++D+ L + +PKR TK S + GL
Sbjct: 88 AQIEAAETMSALEDIYLPY-----------------KPKRKTKASVAREKGL-------- 122
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISC 290
E L L + LE K TPEE A F NS LQGAR + A I+
Sbjct: 123 ---EPLALSI--------LEQDKSTPEEEAEAFISEEKGVNSVIEALQGARDIIAENIAE 171
Query: 291 EPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR----EKPLRKFEDAQWL 346
R +R +F+ S + + G+K+ E+P+ + L
Sbjct: 172 NAEARAKIRELFLQKGTFK--------SEVFKGKEEEGIKYKDYFEWEEPISSAPSHRIL 223
Query: 347 LIQKAEEEKLLQVTIKLP--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
+++ E+E +L++ + LP ED++ L + +++ +KSAQ+ L+D
Sbjct: 224 AMRRGEKELILKLDV-LPQEEDAIEIL----ERQFITANNTKSAQVKQ-----ALEDGYK 273
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
L PSM E R L +A ++ + + + P +K+
Sbjct: 274 RLLRPSMETEVRLLTKQKADEEAILVFAENARQLLLAAPMGQKN--------------VM 319
Query: 465 CWGPG-KPETTFVMLDSSGEVVD--VLF--TGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
PG + V LD G++++ ++ TG L+ + E+ L +++
Sbjct: 320 ALDPGFRTGCKLVCLDRQGKLLENTTIYPHTGAGQLK------------EAEQTLNYLVK 367
Query: 520 -HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYEN 578
H+ + +G + T+ ++ EE R ++ + IV +ES +Y
Sbjct: 368 KHEIEAIAIG----NGTAGRE---------TEEFVRK--QQIPNVQIVMVNESGASIYSA 412
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKY 638
S ++ ++ P V+ AV++GR L +PLA + + + ++ +N L
Sbjct: 413 SEVAREEFPDHDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKLQTS--- 469
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
++ ++ N VG+++N A + L ++SGLGP+ A ++ GA R
Sbjct: 470 --LDDTVISCVNAVGVELNTASKQ-----ILAYVSGLGPQLAQNIVEYRNTNGAFKNRAS 522
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LG+K F A GFLR+R + LD + +HPE YGL +++AK++
Sbjct: 523 LKKVPRLGEKAFEQAAGFLRIRNAENP---------LDTSAVHPERYGLVEQMAKDL 570
>gi|338530033|ref|YP_004663367.1| S1 RNA-binding domain-containing protein [Myxococcus fulvus HW-1]
gi|337256129|gb|AEI62289.1| S1 RNA-binding domain-containing protein [Myxococcus fulvus HW-1]
Length = 779
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 172/777 (22%), Positives = 321/777 (41%), Gaps = 129/777 (16%)
Query: 146 KRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEG 205
+R E ++RR + +L ++++L+AA+T E++D+ L +
Sbjct: 60 ERAELDARRDTILRTIEEQGKLTPELTRALKAAKTRTELEDLYLPY-------------- 105
Query: 206 QYKRPKRSTKYSSCSKAGLWEVASKF----GYSSEQLGLQLSLEKMGDELEDPKETPEEM 261
+PKR T+ + + GL +A G E ++ P PE+
Sbjct: 106 ---KPKRRTRAAIARERGLEPLADLLWKQDGRRGEDAAARVR----------PFINPEKD 152
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
+ A L GAR + A ++ + +R+ R + + +
Sbjct: 153 VQD--------QAAALAGARDICAERVAEDAGLRREAREVSARRGTLCSNVVAAKKGEPT 204
Query: 322 SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLS 381
F + G E+PL + + L + + EEE +L+V + LP+D + L +
Sbjct: 205 KFENYYG----HEEPLSQAPSHRVLALLRGEEEGVLKVKLSLPDDEVKGLLA-------G 253
Query: 382 DGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
V+K L+ + ++D D + PS+ E R+ + RA + +G+ L + +
Sbjct: 254 RVVTKPQSLFAQELRAAVEDGWDRLMGPSLEAELRAELKERADRQAIGVFGENLRHLLLT 313
Query: 442 GPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNV 500
P A VLA PG + T M+D +G+VV+ LTL S+
Sbjct: 314 PPA------------GARAVLA--LDPGLRTGTKLAMMDVTGKVVE-----TLTLYSERG 354
Query: 501 RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
D++++ + + H+P ++ AV S + +++ V + + +G ++
Sbjct: 355 ADERARAAKLLAAV--VQKHKPELI---AVGNGTGSREAELF------VRDTLKALGSQV 403
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
+S+ E +Y S ++ D+ P +++ AV++GR LQ+PLA + + +
Sbjct: 404 PVVSV---SEQGASIYSASEVARDEFPDLDVSLRGAVSIGRRLQDPLAELVKIDPKSIGV 460
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
++ + L +K G +V+ N VG+D+N A Q L+ +SG+GP A
Sbjct: 461 GQYQHDVDQGLL--KKKLG---EVVDSCVNAVGVDVNTA---SPQL--LEHVSGVGPSLA 510
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
L G TR++ + GLG K F A GFLRVR + + LD + +
Sbjct: 511 KKLVAHRAAKGRFTTRRELLKVSGLGPKTFEQAAGFLRVRGT----------EPLDASAV 560
Query: 741 HPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE 800
HPE YG+ + +A++ L +A+ + +L++ R++ E
Sbjct: 561 HPERYGVVERMARD----------------LGVAVSALVGNAELVRKIDPRRYLGPDLGE 604
Query: 801 NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQ 860
TL I EL +D R + P E+ + + + EG V+Q V V
Sbjct: 605 L---TLKDILAELEKPSRDPRGDFTAPQHREDLRSL-----EDVKEGMVLQGVVTNVTAF 656
Query: 861 RAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
A + G++ S + + S+ + GD LT ++ ++ R ++ L R
Sbjct: 657 GAFVDVGVHQDGLVHVSQISTRFV-KDPSEVVKVGDRLTVRVLTVDLARKRLALSVR 712
>gi|150402305|ref|YP_001329599.1| RNA-binding S1 domain-containing protein [Methanococcus maripaludis
C7]
gi|150033335|gb|ABR65448.1| RNA binding S1 domain protein [Methanococcus maripaludis C7]
Length = 713
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 174/725 (24%), Positives = 304/725 (41%), Gaps = 129/725 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + GL ++ +L L+ LEK +EL PE
Sbjct: 105 RPKRKTRATIAESKGLKPLS--------ELILKQILEKPIEELAKEYINPE--------L 148
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST-CPTPDGDSAIDSFHQFA 327
NS + + GA+ + A EIS RK++R ++S D S + +++++
Sbjct: 149 EVNSIEDAISGAKDIIAEEISDNADYRKFIRETTFSEGIISVKAKNVDEKSVYEMYYEYS 208
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ + K + L I + E EK+LQV I P + ++ D + K+
Sbjct: 209 -------EAVHKIPGHRILAINRGESEKVLQVKIDAPVE------------FIQDRIFKN 249
Query: 388 AQLWNDQRELILK----DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
L N + ILK D+ + PS+ +E R+ ++ +A++ + + K L + P
Sbjct: 250 IILENSKTSEILKETVIDSYKRLIAPSIEREIRNSLTEKAENGAIEVFSKNLKQLLLQPP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K W P + ++D +G+V+D T N +
Sbjct: 310 IKNKT--------------VLGWDPAFRTGCKIAVVDETGKVLDK--TVVYPTEPHN-KI 352
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
++KK +E ++K H VV +G S S I+ ++++E +DV +
Sbjct: 353 AETKKQVKELIIK----HDIDVVAIGNGTASRES-----EHIVSEILKEVVKDVYY---- 399
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
V +E+ +Y S + SD+ P ++ AV++ R LQ+PLA + + G G+
Sbjct: 400 ---VIVNEAGASVYSASELGSDEFPEYDVGIRSAVSIARRLQDPLAELVKIDPKSIGVGQ 456
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L LT G++E + N VG+D+N A + L ++SG+
Sbjct: 457 YQHDMNQKKLSESLT-----GVVESSV----NSVGVDLNTA-----SVSLLNYVSGINIG 502
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ + G +RK+ + + LGKK F GFLR+ +L D+T
Sbjct: 503 IAKNIVEYRLENGKFESRKELLKVNKLGKKAFEQCAGFLRIPEGK---------NLFDNT 553
Query: 739 RIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKK 798
+HPESY + + L E+ N I +D E ++ + ++ D+ K +K
Sbjct: 554 GVHPESYKITENLLNEL-NISI-------KDIKEKKVDKISEKVDIEKL--------AEK 597
Query: 799 RENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
TL I +EL +D R +P + E ED L EG +++ TVR +
Sbjct: 598 LNCGVPTLEDIIKELEKPGRDPREDLPKPVLRSDVL----ELED-LKEGMILKGTVRNIV 652
Query: 859 GQRA---ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLV 915
A I V GLA + + SD + L D + GDI+ + I ++ +V L
Sbjct: 653 DFGAFIDIGVHHDGLAHI---SEISDRFIKHPL-DVISVGDIVDVMVMDIDFDKKRVSLS 708
Query: 916 CRESE 920
+ ++
Sbjct: 709 IKRAK 713
>gi|428672359|gb|EKX73273.1| conserved hypothetical protein [Babesia equi]
Length = 1743
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 184/792 (23%), Positives = 324/792 (40%), Gaps = 145/792 (18%)
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
Y + +S S +W IL ++ L+P KE R L+ +A++ +++ + L K
Sbjct: 920 YCPNNIS-SHSIWKYVHRAILDRLVNVELIPKFRKEIRELLLKKAQASVILHSQRMLQYK 978
Query: 439 VSVGPYQRKDNDITPDEEAAP---RVLACCWGPGKPETTFVMLDSSGEV-VDVLFTGCLT 494
+ V P D + ++A RV AC ++LDS + ++ +G +
Sbjct: 979 LDVAP-NFNDTVLALVNDSASDGLRVHACLVNNFGESKASIVLDSLLSLAINTKLSGYTS 1037
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
L + Q +D + L + H+P V+++G N+ L + + + ++
Sbjct: 1038 LP-----NFQQVMSDVDILTSTIKAHRPSVILVGLTNIYSLDLYSRVEKYLLPKLDT--- 1089
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
++S+ +PRL +S+ G K + + A++L R+ +PLA L
Sbjct: 1090 -------DISLKRASCEVPRL-----VSTSTRGGDKED-QMALSLARWYIDPLAETLNLW 1136
Query: 615 GPGRE--ILSWKLCPLENFLTPDEKY-GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
E +L KL PL+ ++ P E++ +E +V V G+DIN + LQF
Sbjct: 1137 KVYDENVLLRLKLHPLQ-YMIPQERFQSALESTIVSVVCDAGVDINRVKKCPHTESQLQF 1195
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKK------VFVNAVGFLRVRRSGQA 725
I+GLGPRK+ L R +++ I R +H GK VF+N F+++
Sbjct: 1196 IAGLGPRKSLELTR-MLKFSTISNRSQIKLSHLQGKDDIIGSVVFLNCASFIKI------ 1248
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLL 785
S S+ D LD TRIHP G +A+++ N G L DDE + E A++ + P L
Sbjct: 1249 -SQSEATDSLDTTRIHPIECGF---IAEKLCN----GSL-DDELSGEEAVQEILANPTKL 1299
Query: 786 KTYLLDRH--IKEKKRENKRETLYL--IRRELIHGFQDWRNQYKEPSQDEEFYMISGETE 841
L+ + + ++++ R YL I+ EL F D+R + +PS E FY +
Sbjct: 1300 DELDLEAYSLLLFERQDMPRMLPYLLFIKDELQSPFYDFRLPFTQPSSSETFYEV----- 1354
Query: 842 DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCK 901
++ +A +R G +C R +L DK + +L +
Sbjct: 1355 -----LQLDRAALR--SGSHVLC-------------------RFDDLFDKFAKATVLPYQ 1388
Query: 902 IKSIQKNRYQVFLVCRESEMRNNRYQHCQ-----------NLDPYYHEERSSRQSE---- 946
+++ + YQ S NR + + + DP RS+ + E
Sbjct: 1389 LRAHISDYYQFKTDVHRSSREYNRNINLKGETFSARVVKLDYDPIIENGRSTYRIEISLT 1448
Query: 947 --QEK---ARKEKELAKKHFKERL------------------------------IVHPCF 971
Q K R +L +H E L I HPC+
Sbjct: 1449 AYQRKYILTRFLADLEDEHIDEYLSPLVKFDVNYSKKPLFTEFAEKKKIQYRRAIRHPCY 1508
Query: 972 QNVTADEAMKLLSAKE--PGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDI 1029
+ + + L E GE I P S L L +K + + K+ +
Sbjct: 1509 RMWPLHKTVSFLKQAEIPVGECCICPMSEW-DRLNLVIKTCVDPFNFATFVIHEKNQRIP 1567
Query: 1030 KSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSK-AEVDELLRIE 1088
L GK L I ++ F +LD+++ ++ + L +L+ ++ K+R+ S ++V+ L E
Sbjct: 1568 GEL---GKELYIQKEKFNNLDQIIAQFCETLKLNLEEFYTHPKYRQTSDYSKVERDLIQE 1624
Query: 1089 KAEFPTRIVYGF 1100
A P I +
Sbjct: 1625 SALKPDSITWAI 1636
>gi|110803195|ref|YP_699443.1| transcription accessory protein [Clostridium perfringens SM101]
gi|110683696|gb|ABG87066.1| RNA-binding protein [Clostridium perfringens SM101]
Length = 720
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 202/875 (23%), Positives = 353/875 (40%), Gaps = 186/875 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L IS ++ +++L + +PFIA YRKE L D+ R
Sbjct: 11 ELGISLKQVISVIEMLD-EGNTVPFIARYRKERTGGL-------------TDEVLR---- 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
K+++ L + +L+ + +E+ RI +E ++L + +
Sbjct: 53 KFNERLTYLRNLESR-------------------KEDVLRIIEE-----QEKLTPELKLN 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
+E A T EV+D+ F + K+ T+ + + GL +A
Sbjct: 89 IEKATTLTEVEDIYRPF-----------------KAKKRTRATMAIEKGLKPLAE----- 126
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
L LS E GD +E+ + E + + N +A LQGA + + IS
Sbjct: 127 -----LILSGEFNGDIVEEANKYINE-----EKGVKNEEEA-LQGAMDIISEIISDNADY 175
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
RK++R+ + ++ + + + + ++ + ++P+R + L I + E+E
Sbjct: 176 RKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDY-------KEPVRTIPSHRILAINRGEKE 228
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
K+L V + +D + YL+ V K ++ + E +KD+ + PS+ +E
Sbjct: 229 KILSVKVTCNDDKII--------DYLNKKVLKGNKITDKYLEESIKDSFKRLIYPSIERE 280
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
RS ++ + + + + L + P + K + + PG +
Sbjct: 281 IRSELTSKGEEGAIDIFKANLKALLMQAPIKGK--------------VVMGFDPGFRTGC 326
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+LD +G+ V+ T QN D+ L K + H V+ LG S
Sbjct: 327 KVAILDETGKFVE--NTTVYPTAPQNRIDETIST-----LKKLIKKHGVQVISLGNGTAS 379
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S E+I KM++E + G E L V E+ +Y S +++ + P V
Sbjct: 380 RES-----EEVIAKMLKEIKDETGKE---LFYVIVSEAGASVYSASELANKEYPDLDVTV 431
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ A+++GR LQ+PLA + + G G+ L+ L G++E D
Sbjct: 432 RGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLA-----GIVE----DCV 482
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+D+N+A + L +ISG+ A ++ G +RK+ + LG+K
Sbjct: 483 NNVGVDLNIATP-----SLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKA 537
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDE 768
+ GFLRV S +A LD+T +HPESYG+A+EL K + Y E DL +
Sbjct: 538 YEQCAGFLRVMESKEA---------LDNTSVHPESYGVAKELIKTLGYT---EEDLKNG- 584
Query: 769 DALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHG---FQDWRNQYK 825
K +D +K K N + +EL G D + K
Sbjct: 585 -----------------KLVDIDERVKAKGISN-------LAKELEVGEPTLNDIIKEIK 620
Query: 826 EPSQD--EEF---YMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
+P +D EE SG E L G ++ TVR V A + G++ K
Sbjct: 621 KPGRDPREELPKPIFKSGVIEMKDLKPGMILMGTVRNVSDFGAFVDIGVHQDGLVHKSQM 680
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+D + L D + GDI+ +I + R ++ L
Sbjct: 681 ADRFVKHPL-DIVKVGDIVEVRILDVDLKRKRISL 714
>gi|422875082|ref|ZP_16921567.1| hypothetical protein HA1_12631 [Clostridium perfringens F262]
gi|380304077|gb|EIA16370.1| hypothetical protein HA1_12631 [Clostridium perfringens F262]
Length = 720
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 201/875 (22%), Positives = 352/875 (40%), Gaps = 186/875 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L IS + +++L + +PFIA YRKE L D+ R
Sbjct: 11 ELGISLKQVTSVIEMLD-EGNTVPFIARYRKERTGGL-------------TDEILR---- 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
K+++ L + +L+ + +E+ RI +E ++L +
Sbjct: 53 KFNERLTYLRNLESR-------------------KEDVLRIIEE-----QEKLTPELKLK 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
+E A T EV+D+ F + K+ T+ + + GL +A
Sbjct: 89 IEKATTLTEVEDIYRPF-----------------KAKKRTRATMAVEKGLKPLAE----- 126
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
L LS E GD +E+ + E + + N +A LQGA + + IS
Sbjct: 127 -----LILSGEFNGDIVEEANKYINE-----EKGVKNEEEA-LQGAMDIISEIISDNADY 175
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
RK++R+ + ++ + + + + ++ + ++P+R + L I + E+E
Sbjct: 176 RKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDY-------KEPVRTIPSHRILAINRGEKE 228
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
K+L V + +D + YL+ V K ++ + E +KD+ + PS+ +E
Sbjct: 229 KILSVKVTCNDDKII--------DYLNKKVLKGNKITDKYLEESIKDSFKRLIYPSIERE 280
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
RS ++ + + + + L + + P + K + + PG +
Sbjct: 281 IRSELTSKGEEGAIDIFKANLKSLLMQAPIKGK--------------VVMGFDPGFRTGC 326
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+LD +G+ V+ T QN D+ L K + H V+ LG S
Sbjct: 327 KVAILDETGKFVE--NTTVYPTAPQNKIDETI-----STLKKLIKKHGVQVISLGNGTAS 379
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S E+I KM++E ++G E L V E+ +Y S +++ + P V
Sbjct: 380 RES-----EEVIAKMLKEIKEEIGKE---LFYVIVSEAGASVYSASELANKEYPDLDVTV 431
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ A+++GR LQ+PLA + + G G+ L+ L G++E D
Sbjct: 432 RGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLA-----GIVE----DCV 482
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+D+N+A + L +ISG+ A ++ G +RK+ + LG+K
Sbjct: 483 NNVGVDLNIATP-----SLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKA 537
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDE 768
+ GFLRV S +A LD+T +HPESY +A+EL K + Y E DL +
Sbjct: 538 YEQCAGFLRVMESKEA---------LDNTSVHPESYKVAKELIKTLGYT---EEDLKNG- 584
Query: 769 DALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHG---FQDWRNQYK 825
K +D +K K N + +EL G D + K
Sbjct: 585 -----------------KLVDIDERVKAKGISN-------LAKELEVGEPTLNDIIKEIK 620
Query: 826 EPSQD--EEF---YMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
+P +D EE SG E L G ++ TVR V A + G++ K
Sbjct: 621 KPGRDPREELPKPIFKSGVIEMKDLKPGMILMGTVRNVSDFGAFVDIGVHQDGLVHKSQM 680
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+D + L D + GDI+ +I + R ++ L
Sbjct: 681 ADKFVKHPL-DIVKVGDIVEVRILDVDLKRKRISL 714
>gi|182419861|ref|ZP_02951101.1| protein tex [Clostridium butyricum 5521]
gi|237666425|ref|ZP_04526410.1| tex domain protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376409|gb|EDT73991.1| protein tex [Clostridium butyricum 5521]
gi|237657624|gb|EEP55179.1| tex domain protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 723
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 180/778 (23%), Positives = 330/778 (42%), Gaps = 139/778 (17%)
Query: 154 RIYDETRLALNQQLF-DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKR 212
R D RL Q+ F + I K+LE A+T EV+D+ + P YK PK+
Sbjct: 67 RKADVRRLIEEQEKFTEEIGKALEKAQTLTEVEDI-------YRP---------YK-PKK 109
Query: 213 STKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNS 272
T+ + GL +A L K G + E + + K S
Sbjct: 110 RTRATIAQGKGLAPLA--------------ELIKEGKFTGNIDEEASKYINEEKGV--KS 153
Query: 273 SQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWL 332
++ + GA + A IS E RK++R++ + + + D + + ++ +
Sbjct: 154 AEEAISGALDIIAENISDEAKYRKHIRNLVFKEGKIESKGSSDEPTPYEMYYDYC----- 208
Query: 333 REKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWN 392
+ + K + L I + E+EK+L V I L ED YL + + + +
Sbjct: 209 --EDVYKIPPHRILAINRGEKEKVLAVKIVLNEDK--------SITYLENNILTGNNIVD 258
Query: 393 DQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDIT 452
++ +L L+D+ + PS+ +E R+ ++ + + + + + L + P + K
Sbjct: 259 EKLKLALRDSYKRLIFPSIEREIRNELTDKGEEGAIKIFKENLKALLLQAPIKGK----- 313
Query: 453 PDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL-TLRSQNVRDQQSKKNDQ 510
+ + PG + +LD++G+ ++ T TL +++ + +KK +
Sbjct: 314 ---------VVMGFDPGFRTGCKIAILDATGKFLE--NTAVYPTLPKKDI--EGTKKTLK 360
Query: 511 ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDE 570
+ K+ +D V+ LG S S E+I +M+ E ++ G ELS V E
Sbjct: 361 ALISKYDVD----VISLGNGTASRES-----EEVIAEMISEIKKETGK---ELSYVIVSE 408
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLC 626
+ +Y S +++ + P V+ A+++GR LQ+PLA + + G G+
Sbjct: 409 AGASVYSASELATKEYPDLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQ-------- 460
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
++ +TP + + V+ D N VG+D+N+A A L ISG+ AS+ ++
Sbjct: 461 -YQHDVTPKKLEESLAGVVEDSVNTVGVDLNIATP-----ALLTHISGIN----ASIAKN 510
Query: 687 LV----RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
+V G +RK+ + LG+K + GFLRV S + LD+T +HP
Sbjct: 511 IVDYRDEKGGFISRKELLKVKRLGQKAYEQCAGFLRVSESKEP---------LDNTSVHP 561
Query: 743 ESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKREN 801
ESY A+++ + + YN+ ED + + R +L + L + E
Sbjct: 562 ESYEAAKKIIEVLGYNK---------EDLKNKNLNDIDKRAELKGLHKLSEEV-----EV 607
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE-DTLAEGRVVQATVRRVQGQ 860
TL I +EL +D R + +P + +G E L G V+ TVR V
Sbjct: 608 GELTLKDIIKELKKPGRDPREEMPKP------ILKTGIIEMKDLKPGMVLAGTVRNVSDF 661
Query: 861 RAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
A + G++ K +D + L D + GD++ I + + R ++ L ++
Sbjct: 662 GAFVDIGVHQDGLVHKSQMADRFVKHPL-DIVKVGDVVKVSILEVDEKRKRISLTMKD 718
>gi|342216312|ref|ZP_08708959.1| S1 RNA binding domain protein [Peptoniphilus sp. oral taxon 375
str. F0436]
gi|341587202|gb|EGS30602.1| S1 RNA binding domain protein [Peptoniphilus sp. oral taxon 375
str. F0436]
Length = 614
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 219/485 (45%), Gaps = 73/485 (15%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
F S+ LQG + A S + +R V+ + + +G + D++ +
Sbjct: 61 FEDSEEALQGGMDILAEAYSDDAKIRALVKKFVR---LTGQIASQEGKKSDDTYAMY--- 114
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ 389
+ RE+PL++ ++ + L + + E+E+ L+V I P+D L L D K
Sbjct: 115 -YDREEPLKRIQNHRVLALNRGEKEEALKVKINFPKDLLE---GQVAMMALVDNQVK--- 167
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN 449
D++E LKD LD + PS+ +E R+ ++ RA+ + + K L + + P K+N
Sbjct: 168 ---DKQEEALKDGLDRLVYPSIEREIRNDLTERAQKDAIDVFAKNLKPLLLMRPL--KNN 222
Query: 450 DITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQSK 506
RVLA PG + LD G+V+D V++ + + K
Sbjct: 223 ----------RVLA--MDPGYRTGCKVAALDEYGKVLDHTVIYV---------TKSDREK 261
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
+ ++ +L+ + + V +G S + + + +++++ D+ + +
Sbjct: 262 EAGEKEILRLIKKYGLQVASIGNGTASRET-----EQFMSDLIQDNHLDMTYAIT----- 311
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
+E+ +Y S++ +++ P V+ A+++GR LQ+PLA + + E +
Sbjct: 312 --NEAGASIYSASKLGAEEFPDLDVTVRGAISIGRRLQDPLAELVKI-----EPRHIGVG 364
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
++ L E G ++ V+ D N+VG+D N A L +++G+GP+ A + +
Sbjct: 365 QYQHDLPKQELEGTLQGVVQDSVNRVGVDPNTA-----SVPLLSYVAGIGPKLAKEIVKY 419
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
G +RK+ G+G F + GFLR+ + ++LD T +HPESY
Sbjct: 420 REEKGPFHSRKELKEVKGMGPASFQQSAGFLRIVDAE---------NILDQTAVHPESYP 470
Query: 747 LAQEL 751
LAQ L
Sbjct: 471 LAQLL 475
>gi|68067129|ref|XP_675535.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56494777|emb|CAH99045.1| conserved hypothetical protein [Plasmodium berghei]
Length = 1016
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 203/444 (45%), Gaps = 62/444 (13%)
Query: 476 VMLDSSGEVVDVLFTGCLTL----RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN 531
V D G++++ ++ + + + +++ +Q+ ND L F+ +P ++
Sbjct: 207 VACDIYGDIIEYMYLDNIYIDIIKKEKSIIEQEQIANDINIFLSFLKKMKPDII------ 260
Query: 532 LSCTSLKDDIYEIIFKMVEEH-PRDVGHEMDEL---------SIVYGDESL---PRLY-- 576
C ++D +IF ++ D +E D SI Y + S+ LY
Sbjct: 261 --CVGIRDIPSYMIFSYIQNMLNNDRSNEKDYFFSKAQHSNSSIPYNNTSIVIAENLYIP 318
Query: 577 ----ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC-GPGREILSWKLCPLENF 631
N + S+D ++L RY+QNPL V +L G + +L+ L L+ +
Sbjct: 319 FIVTNNLKYSTDLTTKYSREALLCLSLCRYVQNPLDAVLSLFEGENKNMLNICLHDLQKY 378
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA-PLQFISGLGPRKAASLQRSLVRA 690
+ + + ++++D+ N+ G DIN ++ F L +ISGLG RK L + L+
Sbjct: 379 ICGYKLEHVFYRIILDIVNKTGCDINFVKKKKHYFGNALSYISGLGLRKKEELMK-LLHN 437
Query: 691 GAIFTRKDFVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
+ TR+D +T +G V++N F+R+ +G S++I+ LD+TRIHP +Y
Sbjct: 438 RNLNTREDLLTLSSNKNLIGNCVYMNCASFIRIIGTG-----SEYIEALDNTRIHPINY- 491
Query: 747 LAQELAKEVYNRDIEGDLND--DEDALEMAIEHVRDRPDLL---------KTYLLDRHIK 795
++ +++ ++ N+ + + ++ D+ ++ K Y L++ K
Sbjct: 492 --HDVILDLFVNSVDNKKNNFLKNTNIYDIVNYIIDKKKIINNIEIKEYSKKYYLEKKNK 549
Query: 796 EKKRENKRETLYL--IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQAT 853
N YL ++ EL+H ++D+R QY++ ++E FY+I E ++ L G V
Sbjct: 550 INNNTNIFIYPYLKFVKNELLHPYKDYRCQYEKKKEEELFYLIINEKKENLTVGSEVVCK 609
Query: 854 VRRVQGQRAIC---VLESGLAGML 874
+ + Q I +L + G +
Sbjct: 610 MNFINKQNGIIKITILPYNIKGYI 633
>gi|197303695|ref|ZP_03168732.1| hypothetical protein RUMLAC_02424 [Ruminococcus lactaris ATCC
29176]
gi|197297215|gb|EDY31778.1| Tex-like protein N-terminal domain protein [Ruminococcus lactaris
ATCC 29176]
Length = 716
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 202/852 (23%), Positives = 353/852 (41%), Gaps = 179/852 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL ND+ R K ++ L + +L+ +K+
Sbjct: 31 IPFISRYRKEVTGSL-------------NDEQLR----KLYERLIYLRNLE------EKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L S EE ++ +E L QQ+ AAET V+D L+ P
Sbjct: 68 EQVLSSI------EEQGKLTEE----LKQQIL--------AAETLVSVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A+ + LQ S+E P E
Sbjct: 104 -----------YRPKRRTRATIAKEKGLEPLAA-------VIMLQKSME--------PLE 137
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
E + + ++ ++S+AV GAR + A IS R ++R I M+ V+ST P+
Sbjct: 138 KIAEAYISQEKSVVSASEAV-AGARDIIAESISDNADYRSWIRKITMNKGKVISTAKDPE 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + +++F E+P K + L + + E+EK L V ++ PE+ + +
Sbjct: 197 AESVYEMYYEF-------EEPAEKLAGHRILALNRGEKEKFLTVKVQAPEEEILR----- 244
Query: 376 KEHYLSDGVSKSAQLWNDQRELILK----DALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
YL V + + + +LK D+ + + P++ +E RS ++ RA++ + +
Sbjct: 245 ---YLEKKVIVNENPYTTE---VLKETVADSYNRLIAPAIEREIRSELTERAENGAIEVF 298
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFT 490
GK L + P K + W P + ++D +G+V+
Sbjct: 299 GKNLHQLLMQPPIAGK--------------VVLGWDPAFRTGCKLAVVDETGKVI----- 339
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
G + + + ++ L K + + ++ LG S S E I ++++
Sbjct: 340 GTTVIYPTAPTTPKKIQASKDLLKKIIPKYHISLISLGNGTASRES-----EEFIVELLK 394
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E P V + V +E+ +Y S+++S++ P + A ++ R LQ+PLA +
Sbjct: 395 EIPEKVQY-------VIVNEAGASVYSASKLASEEFPKFDVGQRSAASIARRLQDPLAEL 447
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L L G++E D N+VG+D+N A
Sbjct: 448 VKIDPKAIGVGQYQHDMNQKKLGESLN-----GVVE----DCVNKVGVDLNTA------S 492
Query: 667 AP-LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
AP L +ISG+ A ++ G R++ + LG K + GF+R+ + G+
Sbjct: 493 APLLAYISGISSAIAKNIVAYREENGKFADRRELLKVPKLGPKAYEQCAGFMRI-QGGK- 550
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLL 785
+ LD T +HPESY A++L K+ E N L + I RD L
Sbjct: 551 -------NPLDATAVHPESYEAAEKLLKK-QGYKAEDITNHKLTGLSLTI---RDYKKL- 598
Query: 786 KTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
++ E TL I +EL +D R++ +P + E +D L
Sbjct: 599 ----------AEELEIGEITLRDIVKELEKPARDPRDEMPKPILRTDVL----EMKD-LK 643
Query: 846 EGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSI 905
EG V++ TVR V A + G++ +D + L + + GDI+ K+ S+
Sbjct: 644 EGMVLKGTVRNVIDFGAFVDIGVHQDGLVHISQITDKFIKHPL-EAVSVGDIVDVKVMSV 702
Query: 906 QKNRYQVFLVCR 917
+ ++ L R
Sbjct: 703 DMKKKRIQLTMR 714
>gi|159905922|ref|YP_001549584.1| RNA-binding S1 domain-containing protein [Methanococcus maripaludis
C6]
gi|159887415|gb|ABX02352.1| RNA binding S1 domain protein [Methanococcus maripaludis C6]
Length = 713
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 240/555 (43%), Gaps = 97/555 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + GL ++ +L L+ LEK EE A F
Sbjct: 105 RPKRKTRATIAENKGLKPLS--------ELILKQHLEK----------PIEEFAKEFINL 146
Query: 269 MF--NSSQAVLQGARHMAAVEISCEPCVRKYVR-SIFMDNAVVSTCPTPDGDSAIDSFHQ 325
NS + + GA+ + A EIS RK++R + F + + D S + +++
Sbjct: 147 ELEVNSVEDAISGAKDIIAEEISDNADYRKFIRETTFSEGIIAVKAKNVDEKSVYEMYYE 206
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVS 385
++ + + K + L I + E EK+LQV I P + ++ DG+
Sbjct: 207 YS-------EAINKIPGHRILAINRGESEKVLQVKIDAPVE------------FIQDGIF 247
Query: 386 KSAQLWNDQRELILKD-ALDNF---LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
K+ L N + ILKD +D++ + PS+ +E R+ ++ +A++ + + K L +
Sbjct: 248 KNIILENSETSEILKDTVIDSYKRLIAPSIEREIRNSLTEKAENGAIEVFSKNLKQLLLQ 307
Query: 442 GPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNV 500
P + K W P + ++D +G+V+D T N
Sbjct: 308 PPIKNKT--------------VLGWDPAFRTGCKIAVVDETGKVLDK--TVVYPTEPHN- 350
Query: 501 RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
+ ++KK +E ++K H V+ +G S S ++ ++++E +DV +
Sbjct: 351 KIAETKKQVKELIIK----HDIDVIAIGNGTASRES-----EHVVSEILKEVVKDVYY-- 399
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
V +E+ +Y S + SD+ P ++ A+++ R LQ+PLA + + +
Sbjct: 400 -----VIVNEAGASVYSASELGSDEFPEYDVGIRSAISIARRLQDPLAELVKIDPKSIGV 454
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
++ + L+ E G + + V N VG+D+N A + L ++SG+ A
Sbjct: 455 GQYQHDMNQKKLS--ESLGAVVESSV---NSVGVDLNTA-----SVSLLNYVSGINMGIA 504
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ G +RK+ + + LGKK F GFLR+ +L D+T +
Sbjct: 505 KNIVAYRTENGKFESRKELLKVNKLGKKAFEQCAGFLRIPEGK---------NLFDNTGV 555
Query: 741 HPESYGLAQELAKEV 755
HPESY +A+ L E+
Sbjct: 556 HPESYKIAENLLNEL 570
>gi|225016511|ref|ZP_03705703.1| hypothetical protein CLOSTMETH_00417 [Clostridium methylpentosum
DSM 5476]
gi|224950740|gb|EEG31949.1| hypothetical protein CLOSTMETH_00417 [Clostridium methylpentosum
DSM 5476]
Length = 717
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 166/683 (24%), Positives = 284/683 (41%), Gaps = 158/683 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL +D R L R
Sbjct: 31 IPFIARYRKEATGSL-------------DDQLLRE---------------------LSDR 56
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L++ K+R EE + I E + L +L D+I AA+T E++D L+ P
Sbjct: 57 LTYLRNLQKRR-EEVTASI--EAQGKLTSELSDAIG----AAKTLTEIED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK PKR T+ S GL +A + LE+ G +LE
Sbjct: 104 ----------YK-PKRKTRASIARAKGLEPLAKQI------------LEQRGIDLE---- 136
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS-IFMDNAVVSTCPTPD 315
+ A+ F + Q LQGA+ + A +IS + +RK +RS +F + +VVS D
Sbjct: 137 ---QTAAGFVTEEVPTVQDALQGAQDILAEDISDDAALRKRLRSFLFQNGSVVSKAANSD 193
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK--LFS 373
DS ++ F+ +P+ K + L I + E E LL+V++ S+NK S
Sbjct: 194 ADSVYTMYYDFS-------EPINKIAGHRVLAIDRGEREGLLKVSV-----SVNKPEAVS 241
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ Y+ K + +D +D D + PS+ +E RS ++ +A + +
Sbjct: 242 LLRRAYV-----KGSGACSDLVSAACEDGFDRLIFPSLEREIRSHLTEQASEAAIKVFSL 296
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L + P + + + PG + ++D +G+V+D T
Sbjct: 297 NLRQLLMQPPVK--------------GTVTLGFDPGYRTGCKVAVVDDTGKVLDT--TVV 340
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ N K + +++L +++ H V A+ S + + + I ++++E
Sbjct: 341 YPTQPHN------KTREAKQILSGLIEK--HHVTTIAIGNGTASRESEAF--IAELLKEL 390
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
P V S + E+ +Y S++++++ P +++ AV++ R LQ+PLA +
Sbjct: 391 PHKV-------SYMVVSEAGASVYSASKLAAEEFPQFDVSLRSAVSIARRLQDPLAELVK 443
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ ++ L G++E + NQVG+D+N A
Sbjct: 444 IDPKAIGVGQYQHDMPKARMDEALG-----GVVESCV----NQVGVDVNTASQ-----PL 489
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L +SG+ A ++ G+ R+ F+ LGKK + GFLR+
Sbjct: 490 LARVSGINAGVAKNITAYRDENGSFTDRRQFLKVAKLGKKAYEQCAGFLRIPAGD----- 544
Query: 729 SQFIDLLDDTRIHPESYGLAQEL 751
+LLD+T +HPESY A+EL
Sbjct: 545 ----NLLDNTAVHPESYKAAKEL 563
>gi|422346835|ref|ZP_16427749.1| competence protein ComEA helix-hairpin-helix repeat region
[Clostridium perfringens WAL-14572]
gi|373225668|gb|EHP47999.1| competence protein ComEA helix-hairpin-helix repeat region
[Clostridium perfringens WAL-14572]
Length = 720
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 163/704 (23%), Positives = 289/704 (41%), Gaps = 147/704 (20%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L IS + +++L + +PFIA YRKE L D+ R
Sbjct: 11 ELGISLKQVTSVIEMLD-EGNTVPFIARYRKERTGGL-------------TDEVLR---- 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
K+++ L + +L+ + +E+ RI +E ++L +
Sbjct: 53 KFNERLTYLRNLESR-------------------KEDVLRIIEE-----QEKLTPELKLK 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
+E A T EV+D+ F + K+ T+ + + GL +A
Sbjct: 89 IEKATTLTEVEDIYRPF-----------------KAKKRTRATMAVEKGLKPLAE----- 126
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
L LS E GD +E+ + E + + N +A LQGA + + IS
Sbjct: 127 -----LILSGEFNGDIVEEANKYINE-----EKGVKNEEEA-LQGAMDIISEIISDNADY 175
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
RK++R+ + ++ + + + + ++ + ++P+R + L I + E+E
Sbjct: 176 RKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDY-------KEPVRTIPSHRILAINRGEKE 228
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
K+L V + +D + YL+ V K ++ + E +KD+ + PS+ +E
Sbjct: 229 KILSVKVTCNDDKII--------DYLNKKVLKGNKITDKYLEESIKDSFKRLIYPSIERE 280
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
RS + + + + + L + P + K + + PG +
Sbjct: 281 IRSELISKGEEGAIDIFKANLKALLMQAPIKGK--------------VVMGFDPGFRTGC 326
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+LD +G+ V+ T QN D+ L K + H V+ LG S
Sbjct: 327 KVAILDETGKFVE--NTTVYPTAPQNRIDETIST-----LKKLIKKHGVQVISLGNGTAS 379
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S E+I KM++E + G E L V E+ +Y S +++ + P V
Sbjct: 380 RES-----EEVIAKMLKEIKDETGKE---LFYVIVSEAGASVYSASELANKEYPDLDVTV 431
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ A+++GR LQ+PLA + + G G+ L+ L G++E D
Sbjct: 432 RGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLA-----GIVE----DCV 482
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+D+N+A + L +ISG+ A ++ G +RK+ + LG+K
Sbjct: 483 NNVGVDLNIATP-----SLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKA 537
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
+ GFLRV S +A LD+T +HPESYG+A+EL K
Sbjct: 538 YEQCAGFLRVMESKEA---------LDNTSVHPESYGVAKELIK 572
>gi|323451964|gb|EGB07839.1| hypothetical protein AURANDRAFT_64382 [Aureococcus anophagefferens]
Length = 1920
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 146/349 (41%), Gaps = 66/349 (18%)
Query: 468 PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
P T FV+L SG V D + R +D R+ +F+ H+P VVV+
Sbjct: 954 PPAESTAFVLLGPSGSVSD--------HEVASSRANDRSPDDVRRVARFLRRHRPDVVVV 1005
Query: 528 --GAVNLSCTSLKDDIYEIIFKMVEEHPR------DVGHEMDE---------LSIVYGDE 570
GA +C + + E PR + +DE +I + D+
Sbjct: 1006 STGAGAAACRRCMKFVEASVRVAREPLPRYEDESPEESMRLDEEEELVGEWQCAISFADD 1065
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL------------CGPGR 618
L R + +S + +L + AV+L R QNPLA ++ PG
Sbjct: 1066 RLARAFASSIRADRELKEYPAPYRVAVSLARAAQNPLAELSACFTARGLRGGAGLGLPGE 1125
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
++ KL PL + + + +VD G+D+N A+ + F LQF++GLGPR
Sbjct: 1126 DLTMVKLHPLADMVPGKLLLETYAKALVDANCAHGVDLNQALQYDHHFGCLQFVAGLGPR 1185
Query: 679 KAASLQRSLVRAG-------------------AIF-TRKDFVTAHGLGKKVFVNAVGFLR 718
KAA+L+RS G A+F R + T G F N FLR
Sbjct: 1186 KAAALRRSARSYGGSAREGGAHGVVVSRRNLAALFDARGKYSTKRGSATNCFTNCAAFLR 1245
Query: 719 VRRSGQAASSSQFIDLLDDTRIHPES-------YGLAQELAKEVYNRDI 760
VR +G A + +D LDDTR+HPE Y AQ++ + +RD+
Sbjct: 1246 VRPAGPLADMA--LDPLDDTRVHPECYFGGEGFYDWAQKMCADGLDRDL 1292
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 181/402 (45%), Gaps = 57/402 (14%)
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT---LAEGRVVQATVRRVQ 858
+RE L ++REL ++D R ++ P++ F ++SG +D + E ++V A ++R
Sbjct: 1379 RREQLEDVKRELRCPYRDVRAPWRPPTEAAVFDLLSGLGQDQGGGVKEKQIVTARIQRAD 1438
Query: 859 GQRAICVLESGLAGMLMKE---------DYSDDWRDSE-----LSDKLHEGDILTCKIKS 904
R V + GL+G + E + +D+W +E KL +++ C +
Sbjct: 1439 KYRLFVVTDLGLSGGVHVEFLDAEGGRVENADEWLSTEGLRPRFDAKLAIDEVVECAVLK 1498
Query: 905 IQKNRYQVFLVCRESEM-----RNNRYQHC----QNLDPYYHEER------SSRQSEQEK 949
+ R+++ L R+ ++ Y H + DP + S+ +S ++
Sbjct: 1499 VDHERFRIELSRRDDDVFFPQSAQAFYDHYGARGVDFDPALDASKMVRDYVSNARSRLDR 1558
Query: 950 ARKEKELAKKHFKERL-----------IVHPCFQ-NVTADEAMKLLSAKEPGESIIRPSS 997
++ ++ + L I+HP + A LL GE + RPSS
Sbjct: 1559 CKRVRDDRARALDASLKPRAAARARRHILHPAYHAKCDYKAAEALLETMGAGEVVARPSS 1618
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI--GE-DTFEDLDEVVD 1054
G LT + DGVY H ++ D ++ V L++ GE + +ED+DE++
Sbjct: 1619 SGKVALTWAFR--DGVYKHVEV----DDADEVAPGVPPKFRLEVSPGEVEEYEDIDELLA 1672
Query: 1055 RYIDPLVSHLKAMLSYRKFRKGSK--AEVDELLRIEKAEFPTRIVYGFGISHEHPGTFIL 1112
RY+ P+ + + + RKFR + A ++ L+ ++ P I Y + +PG F L
Sbjct: 1673 RYVLPMNDFCEDVAASRKFRDDVRDAAASEKELKAQRRAAPASIPYFLWVDARYPGRFAL 1732
Query: 1113 TYI--RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRH 1152
+Y+ ++T E++ + P G R + F +D + +F++H
Sbjct: 1733 SYLPPKATTCRLEWLKVTPNGLYLRDKTFLGVDDALNHFKKH 1774
Score = 40.8 bits (94), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 132/321 (41%), Gaps = 55/321 (17%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
+E+ WI +L R +P + +++SR ++RF + ++PF+A YR
Sbjct: 288 EEAAWIARKL----------RHPHAPADATVVAVSR--LLRFY---NEDCYEVPFVAAYR 332
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYY 144
++ + D++ E LW + +LD ++ L KR+
Sbjct: 333 RDYFVD--SDIKPAE--------------------LWRVFELDDEFARLAKRR------- 363
Query: 145 KKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDE 204
+++ ++ R A+ + F + L AA + D + + G D+
Sbjct: 364 -----KDTVKMVKALR-AVAPRPF--LGPGLAAARLADDGAHRDARHYVKHCFARAGADD 415
Query: 205 GQYKRPKRSTKY-SSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE-DPKETPEEMA 262
G+ + +R + ++ + + F S++ + L ++ P E P+
Sbjct: 416 GKRRPGQREAAFWAAVRDNDVDKFCRTFAKSAKAVDDALRDPDAAAQMPPTPAEYPDMAC 475
Query: 263 SNFKCAM-FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
+F A + + + A A +++ P VR R F + A V+T PT G + ID
Sbjct: 476 LDFLGAPPLDDESKLRECAVAALARDLAALPSVRAEARRAFRELATVTTRPTDKGRAEID 535
Query: 322 SFHQFAGVKWLREKPLRKFED 342
H++ G+++L+ K + +F D
Sbjct: 536 VCHEYHGLQYLQNKKVAEFLD 556
>gi|45358690|ref|NP_988247.1| RNA binding S1 domain-containing protein [Methanococcus maripaludis
S2]
gi|45047556|emb|CAF30683.1| RNA binding S1 [Methanococcus maripaludis S2]
Length = 713
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 132/553 (23%), Positives = 240/553 (43%), Gaps = 93/553 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + GL ++ +L L+ LEK +EL + PE
Sbjct: 105 RPKRKTRATIAESKGLKPLS--------ELILKQILEKPIEELAEGFVNPE--------L 148
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST-CPTPDGDSAIDSFHQFA 327
NS + + GA+ + A EIS RK++R ++S D S + +++++
Sbjct: 149 EVNSVEDAISGAKDIIAEEISDNADYRKFIRENTFSEGIISVKAKNVDEKSVYEMYYEYS 208
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ + K + L I + E EK+LQV + P + ++ D + K+
Sbjct: 209 -------EAINKIPGHRILAINRGESEKILQVKLDAPVE------------FIHDWIFKN 249
Query: 388 AQLWNDQRELILKD-ALDNF---LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
L N Q ILKD +D++ + PS+ +E R+ ++ +A++ + + K L + P
Sbjct: 250 IILENSQTSEILKDTVIDSYKRLIAPSIEREIRNSLTEKAENGAIEVFSKNLKQLLLQPP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K W P + ++D +G+V+D T N +
Sbjct: 310 IKNKT--------------VLGWDPAFRTGCKIALVDETGKVLDK--TVVYPTEPHN-KV 352
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
++KK +E ++K+ +D VV +G S S I+ ++++E DV +
Sbjct: 353 TETKKQVKELIIKYDID----VVAIGNGTASRES-----EHIVSEILKEVVNDVYY---- 399
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILS 622
V +E+ +Y S + SD+ P ++ A+++ R LQ+PLA + + +
Sbjct: 400 ---VIVNEAGASVYSASELGSDEFPEYDVGIRSAISIARRLQDPLAELVKIDPKSIGVGQ 456
Query: 623 WKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAAS 682
++ + L+ E G + + V N VG+D+N A + L ++SG+ A +
Sbjct: 457 YQHDMNQKKLS--ESLGAVVESSV---NSVGVDLNTA-----SVSLLNYVSGINIGIAKN 506
Query: 683 LQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
+ G +RK+ + LGKK F GFLR+ +L D+T +HP
Sbjct: 507 IVAYRTENGKFESRKELLKVSKLGKKAFEQCAGFLRIPEGK---------NLFDNTGVHP 557
Query: 743 ESYGLAQELAKEV 755
ESY +A+ L E+
Sbjct: 558 ESYKIAENLLNEL 570
>gi|182624039|ref|ZP_02951827.1| RNA-binding protein [Clostridium perfringens D str. JGS1721]
gi|177910932|gb|EDT73286.1| RNA-binding protein [Clostridium perfringens D str. JGS1721]
Length = 720
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 200/875 (22%), Positives = 350/875 (40%), Gaps = 186/875 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L IS + +++L + +PFIA YRKE L D+ R
Sbjct: 11 ELGISLKQVTSVIEMLD-EGNTVPFIARYRKERTGGL-------------TDEVLR---- 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
K+++ L + +L+ + +E+ RI +E ++L +
Sbjct: 53 KFNERLTYLRNLESR-------------------KEDVLRIIEE-----QEKLTPELKLK 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
+E A T EV+D+ F + K+ T+ + + GL +A
Sbjct: 89 IEKATTLTEVEDIYRPF-----------------KAKKRTRATMAIEKGLKPLAE----- 126
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
L LS E GD +E+ + E + + N +A LQGA + + IS
Sbjct: 127 -----LILSGEFNGDIVEEANKYINE-----EKGVKNEEEA-LQGAMDIISEIISDNADY 175
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
RK++R+ + ++ + + + + ++ + ++P+R + L I + E+E
Sbjct: 176 RKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDY-------KEPVRTIPSHRILAINRGEKE 228
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
K+L V + +D + YL+ V K ++ + E +KD+ + PS+ +E
Sbjct: 229 KILSVKVTCNDDKII--------DYLNKKVLKGNKITDKYLEESIKDSFKRLIYPSIERE 280
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
RS ++ + + + + L + P + K + + PG +
Sbjct: 281 IRSELTSKGEEGAIDIFKANLKALLMQAPIKGK--------------VVMGFDPGFRTGC 326
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+LD +G+ V+ T QN D+ L K + H V+ LG S
Sbjct: 327 KVAILDETGKFVE--NTTVYPTAPQNRIDETI-----STLKKLIKKHGVQVISLGNGTAS 379
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S E+I KM++E + G E L V E+ +Y S +++ + P V
Sbjct: 380 RES-----EEVIAKMLKEIKDETGKE---LFYVIVSEAGASVYSASELANKEYPDLDVTV 431
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ A+++GR LQ+PLA + + G G+ L+ L G++E D
Sbjct: 432 RGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLA-----GIVE----DCV 482
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+D+N+A + L +ISG+ A ++ G +RK+ + LG+K
Sbjct: 483 NNVGIDLNIATP-----SLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKA 537
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDE 768
+ GFLRV S +A LD+T +HPESY +A+EL K + Y E DL +
Sbjct: 538 YEQCAGFLRVMESKEA---------LDNTSVHPESYKVAKELIKTLGYT---EEDLKNG- 584
Query: 769 DALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHG---FQDWRNQYK 825
K +D +K K N + +EL G D + K
Sbjct: 585 -----------------KLVDIDERVKAKGISN-------LAKELEVGEPTLNDIIKEIK 620
Query: 826 EPSQD--EEF---YMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
+P +D EE SG E L G ++ TVR V A + G++ K
Sbjct: 621 KPGRDPREELPKPIFKSGVIEMKDLKPGMILMGTVRNVSDFGAFVDIGVHQDGLVHKSQM 680
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+D + L D + GD++ +I + R ++ L
Sbjct: 681 ADKFVKHPL-DIVKVGDVVEVRILDVDLKRKRISL 714
>gi|347542943|ref|YP_004857580.1| RNA-binding S1 domain-containing protein [Candidatus Arthromitus
sp. SFB-rat-Yit]
gi|346985979|dbj|BAK81654.1| RNA-binding S1 domain-containing protein [Candidatus Arthromitus
sp. SFB-rat-Yit]
Length = 718
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 182/799 (22%), Positives = 332/799 (41%), Gaps = 149/799 (18%)
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQ-QLFDSISKSLEAAETEREVDDVDLKFNLH 194
RK ++ Y + EE+ I RL Q +L D I S+ ++ T E++D+ F
Sbjct: 51 RKFEVRLNYLRNLEEKKENI---IRLIDEQGKLTDEIRNSILSSNTLVEIEDIYRPF--- 104
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
+PK+ T+ + GL +A + L+ + GD LE+
Sbjct: 105 --------------KPKKRTRAIIAEEKGLKPLAE----------IILNKDFSGDILEES 140
Query: 255 -KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
K EE S Q L GA+ + + IS + RK++R+ +N ++ TC
Sbjct: 141 EKFINEEFG-------IKSGQDALDGAKDIISEIISDDANFRKFIRNYVFENGIIETCGE 193
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL-NKLF 372
D + + ++ + REK ++ + L I + E+E +L+V I E+ + + +F
Sbjct: 194 SDKRTQYEDYYDY------REK-VKIIPSYRVLAINRGEKEGILKVKISFGENEIIDMIF 246
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILK---DALDNFLLPSMVKEARSLMSGRAKSWLLM 429
S GV+ ELIL+ D+L +LPS+++E R +S A+ ++
Sbjct: 247 SKI-------GVNNKKN-----NELILESINDSLKRLILPSIIREIRKDLSLVAEDGAII 294
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVL 488
+ + L + P + K + PG + +L +G+ +D
Sbjct: 295 IFKENLKALLMQPPIKGK--------------VVMAIDPGFRTGCKVCILSDTGKYMD-- 338
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIY-EIIFK 547
+ ++ KK D+ + + + ++ +V ++ N + + ++I EII +
Sbjct: 339 -------STTIYPNEPVKKVDESKKILIDLIYKYNVTLISLGNGTASRETEEIVGEIIDE 391
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
+ E D LS V E+ +Y S ++S + P ++ A+++GR LQ+PL
Sbjct: 392 VKVEKNVD-------LSYVIVSEAGASVYSASELASKEYPNLDVTIRGAISIGRRLQDPL 444
Query: 608 AMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
+ + G G+ LE+ L + V+ D N VG+D+N+A
Sbjct: 445 VELVKIDPKSIGVGQYQHDINGKKLEDSL---------KTVIEDCVNSVGVDLNMATP-- 493
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+ L +ISG+ A ++ + G R D + LG K + VGFLR+
Sbjct: 494 ---SILSYISGINASIAENIVKYREENGKFKKRSDLLKVKRLGNKAYEQCVGFLRISDGE 550
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIE-----GDLNDDEDALEMAIEHV 778
LD+T +HPESY ++L ++N DIE G ++D +D + +++
Sbjct: 551 NG---------LDNTSVHPESYDATKKLL-SMFNLDIEDLKYRGKIHDLDDKFKN--QNI 598
Query: 779 RDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISG 838
+ ++L + TL I +EL +D R EP + I
Sbjct: 599 FEISEILGIGEI--------------TLRDIIKELKKPARDPREDLPEPIFKKGVLSI-- 642
Query: 839 ETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDIL 898
D L EG ++ T+R + A + G++ K S+ + L D + G+I+
Sbjct: 643 ---DDLKEGMILVGTIRNISDFGAFVDIGVHQDGLVHKSQLSNKFVKHPL-DVVKLGEIV 698
Query: 899 TCKIKSIQKNRYQVFLVCR 917
K+ I K R ++ L +
Sbjct: 699 NVKVLDIDKERNRISLTMK 717
>gi|110800077|ref|YP_696847.1| RNA-binding protein [Clostridium perfringens ATCC 13124]
gi|110674724|gb|ABG83711.1| RNA-binding protein [Clostridium perfringens ATCC 13124]
Length = 720
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 200/875 (22%), Positives = 350/875 (40%), Gaps = 186/875 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L IS + +++L + +PFIA YRKE L D+ R
Sbjct: 11 ELGISLKQVTSVIEMLD-EGNTVPFIARYRKERTGGL-------------TDEVLR---- 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
K+++ L + +L+ + +E+ RI +E ++L +
Sbjct: 53 KFNERLTYLRNLESR-------------------KEDVLRIIEE-----QEKLTPELKLK 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
+E A T EV+D+ F + K+ T+ + + GL +A
Sbjct: 89 IEKATTLTEVEDIYRPF-----------------KAKKRTRATMAVEKGLKPLAE----- 126
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
L LS E GD +E+ + E + + N +A LQGA + + IS
Sbjct: 127 -----LILSGEFNGDIVEEANKYINE-----EKGVKNEEEA-LQGAMDIISEIISDNADY 175
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
RK++R+ + ++ + + + + ++ + ++P+R + L I + E+E
Sbjct: 176 RKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDY-------KEPVRTIPSHRILAINRGEKE 228
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
K+L V + +D + YL+ V K ++ + E +KD+ + PS+ +E
Sbjct: 229 KILSVKVTCNDDIII--------DYLNKKVLKGNKITDKYLEESIKDSFKRLIYPSIERE 280
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
RS ++ + + + + L + P + K + + PG +
Sbjct: 281 IRSELTSKGEEGAIDIFKANLKALLMQAPIKGK--------------VVMGFDPGFRTGC 326
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+LD +G+ V+ T QN D+ L K + H V+ LG S
Sbjct: 327 KVAILDETGKFVE--NTTVYPTAPQNRIDETI-----STLKKLIKKHGVQVISLGNGTAS 379
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S E+I KM++E + G E L V E+ +Y S +++ + P V
Sbjct: 380 RES-----EEVIAKMLKEIKEETGKE---LFYVIVSEAGASVYSASELANKEYPDLDVTV 431
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ A+++GR LQ+PLA + + G G+ L+ L G++E D
Sbjct: 432 RGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLA-----GIVE----DCV 482
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+D+N+A + L +ISG+ A ++ G +RK+ + LG+K
Sbjct: 483 NNVGVDLNIATP-----SLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKA 537
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDE 768
+ GFLRV S +A LD+T +HPESY +A+EL K + Y E DL +
Sbjct: 538 YEQCAGFLRVMESKEA---------LDNTSVHPESYKVAKELIKTLGYT---EEDLKNG- 584
Query: 769 DALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHG---FQDWRNQYK 825
K +D +K K N + +EL G D + K
Sbjct: 585 -----------------KLVDIDERVKAKGISN-------LAKELEVGEPTLNDIIKEIK 620
Query: 826 EPSQD--EEF---YMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
+P +D EE SG E L G ++ TVR V A + G++ K
Sbjct: 621 KPGRDPREELPKPIFKSGVIEMKDLKPGMILMGTVRNVSDFGAFVDIGVHQDGLVHKSQM 680
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+D + L D + GD++ +I + R ++ L
Sbjct: 681 ADSFVKHPL-DIVKVGDVVEVRILDVDLKRKRISL 714
>gi|18311150|ref|NP_563084.1| hypothetical protein CPE2168 [Clostridium perfringens str. 13]
gi|18145833|dbj|BAB81874.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 720
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 200/875 (22%), Positives = 350/875 (40%), Gaps = 186/875 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L IS + +++L + +PFIA YRKE L D+ R
Sbjct: 11 ELGISLKQVTSVIEMLD-EGNTVPFIARYRKERTGGL-------------TDEVLR---- 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
K+++ L + +L+ + +E+ RI +E ++L +
Sbjct: 53 KFNERLTYLRNLESR-------------------KEDVLRIIEE-----QEKLTPELKLK 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
+E A T E++D+ F + K+ T+ + + GL +A
Sbjct: 89 IEKATTLTEIEDIYRPF-----------------KAKKRTRATMAVEKGLKPLAE----- 126
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
L LS E GD +E+ + E + + N +A LQGA + + IS
Sbjct: 127 -----LILSGEFNGDIVEEANKYINE-----EKGVKNEEEA-LQGAMDIISEIISDNADY 175
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
RK++R+ + ++ + + + + ++ + ++P+R + L I + E+E
Sbjct: 176 RKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDY-------KEPVRTIPSHRILAINRGEKE 228
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
K+L V + +D + YL+ V K ++ + E +KD+ + PS+ +E
Sbjct: 229 KILSVKVTCNDDKII--------DYLNKKVLKENKITDKYLEESIKDSFKRLIYPSIERE 280
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
RS ++ + + + + L + P + K + + PG +
Sbjct: 281 IRSELTSKGEEGAIDIFKANLKALLMQAPIKGK--------------VVMGFDPGFRTGC 326
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+LD +G+ V+ T QN D+ L K + H V+ LG S
Sbjct: 327 KVAILDETGKFVE--NTTVYPTAPQNRIDETI-----STLKKLIKKHGVQVISLGNGTAS 379
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S E+I KM++E + G E L V E+ +Y S +++ + P V
Sbjct: 380 RES-----EEVIAKMLKEIKDETGKE---LFYVIVSEAGASVYSASELANKEYPDLDVTV 431
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ A+++GR LQ+PLA + + G G+ L+ L G++E D
Sbjct: 432 RGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLA-----GIVE----DCV 482
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+D+N+A + L +ISG+ A ++ G +RK+ + LG+K
Sbjct: 483 NNVGVDLNIATP-----SLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKA 537
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDE 768
+ GFLRV S +A LD+T +HPESY +A+EL K + Y E DL +
Sbjct: 538 YEQCAGFLRVMESKEA---------LDNTSVHPESYKVAKELIKTLGYT---EEDLKNG- 584
Query: 769 DALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHG---FQDWRNQYK 825
K +D +K K N + +EL G D + K
Sbjct: 585 -----------------KLVDIDERVKAKGISN-------LAKELEVGEPTLNDIIKEIK 620
Query: 826 EPSQD--EEF---YMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
+P +D EE SG E L G ++ TVR V A + G++ K
Sbjct: 621 KPGRDPREELPKPIFKSGVIEMKDLKPGMILMGTVRNVSDFGAFVDIGVHQDGLVHKSQM 680
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+D + L D + GDI+ +I + R ++ L
Sbjct: 681 ADKFVKHPL-DIVKVGDIVEVRILDVDLKRKRISL 714
>gi|224151154|ref|XP_002199580.1| PREDICTED: transcription elongation factor SPT6-like, partial
[Taeniopygia guttata]
Length = 196
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 1/186 (0%)
Query: 593 VKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQV 652
+++AV+L R +Q+PL A +C +IL KL PL+ + +E + ++ N+V
Sbjct: 10 LRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEFINRVNEV 69
Query: 653 GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFV 711
G+D+N AI A LQ++ GLGPRK L + L + + R VT +G KVF+
Sbjct: 70 GVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHMGPKVFI 129
Query: 712 NAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDAL 771
N GF+++ + S+ +I++LD +R+HPE+Y A+++A + D + + AL
Sbjct: 130 NCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGAL 189
Query: 772 EMAIEH 777
E +E+
Sbjct: 190 EEILEN 195
>gi|168215796|ref|ZP_02641421.1| RNA-binding protein [Clostridium perfringens NCTC 8239]
gi|182382370|gb|EDT79849.1| RNA-binding protein [Clostridium perfringens NCTC 8239]
Length = 720
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 162/704 (23%), Positives = 289/704 (41%), Gaps = 147/704 (20%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L IS + +++L + +PFIA YRKE L D+ R
Sbjct: 11 ELGISLKQVTSVIEMLD-EGNTVPFIARYRKERTGGL-------------TDEVLR---- 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
K+++ L + +L+ + +E+ RI +E ++L +
Sbjct: 53 KFNERLTYLRNLESR-------------------KEDVLRIIEE-----QEKLTPELKLK 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
+E A T EV+D+ F + K+ T+ + + GL +A
Sbjct: 89 IEKANTLTEVEDIYRPF-----------------KAKKRTRATMAIEKGLKPLAE----- 126
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
L LS E GD +E+ + E + + N +A LQGA + + IS
Sbjct: 127 -----LILSGEFNGDIVEEANKYINE-----EKGVKNEEEA-LQGAMDIISEIISDNADY 175
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
RK++R+ + ++ + + + + ++ + ++P+R + L I + E+E
Sbjct: 176 RKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDY-------KEPVRTIPSHRILAINRGEKE 228
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
K+L V + +D + YL+ V K ++ + E +KD+ + PS+ +E
Sbjct: 229 KILSVKVTCNDDKII--------DYLNKKVLKGNKITDKYLEESIKDSFKRLIYPSIERE 280
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
RS ++ + + + + L + P + K + + PG +
Sbjct: 281 IRSELTSKGEEGAIDIFKANLKALLMQAPIKGK--------------VVMGFDPGFRTGC 326
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+LD +G+ V+ T QN D+ L K + H V+ LG S
Sbjct: 327 KVAILDETGKFVE--NTTVYPTAPQNRIDETI-----STLKKLIKKHGVQVISLGNGTAS 379
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S E+I KM++E + G E L V E+ +Y S +++ + P V
Sbjct: 380 RES-----EEVIAKMLKEIKDETGKE---LFYVIVSEAGASVYSASELANKEYPDLDVTV 431
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ A+++GR LQ+PLA + + G G+ L+ L G++E D
Sbjct: 432 RGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLA-----GIVE----DCV 482
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+D+N+A + L +ISG+ A ++ G +RK+ + LG+K
Sbjct: 483 NNVGVDLNIATP-----SLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKA 537
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
+ GFLRV S +A LD+T +HPESY +A+EL K
Sbjct: 538 YEQCAGFLRVMESKEA---------LDNTSVHPESYKVAKELIK 572
>gi|168210098|ref|ZP_02635723.1| RNA-binding protein [Clostridium perfringens B str. ATCC 3626]
gi|170711795|gb|EDT23977.1| RNA-binding protein [Clostridium perfringens B str. ATCC 3626]
Length = 720
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 200/875 (22%), Positives = 350/875 (40%), Gaps = 186/875 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L IS + +++L + +PFIA YRKE L D+ R
Sbjct: 11 ELGISLKQVTSVIEMLD-EGNTVPFIARYRKERTGGL-------------TDEVLR---- 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
K+++ L + +L+ + +E+ RI +E ++L +
Sbjct: 53 KFNERLTYLRNLESR-------------------KEDVLRIIEE-----QEKLTPELKLK 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
+E A T EV+D+ F + K+ T+ + + GL +A
Sbjct: 89 IEKATTLTEVEDIYRPF-----------------KAKKRTRATMAIEKGLKPLAE----- 126
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
L LS E GD +E+ + E + + N +A LQGA + + IS
Sbjct: 127 -----LILSGEFNGDIVEEANKYINE-----EKGVKNEEEA-LQGAMDIISEIISDNADY 175
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
RK++R+ + ++ + + + + ++ + ++P+R + L I + E+E
Sbjct: 176 RKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDY-------KEPVRTIPSHRILAINRGEKE 228
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
K+L V + +D + YL+ V K ++ + E +KD+ + PS+ +E
Sbjct: 229 KILSVKVTCNDDIII--------DYLNKKVLKGNKITDKYLEESIKDSFKRLIYPSIERE 280
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
RS ++ + + + + L + P + K + + PG +
Sbjct: 281 IRSELTSKGEEGAIDIFKANLKALLMQAPIKGK--------------VVMGFDPGFRTGC 326
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
+LD +G+ V+ T QN D+ L K + H V+ LG S
Sbjct: 327 KVAILDETGKFVE--NTTVYPTAPQNRIDETI-----STLKKLIKKHGVQVISLGNGTAS 379
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S E+I KM++E + G E L V E+ +Y S +++ + P V
Sbjct: 380 RES-----EEVIAKMLKEIKEETGKE---LFYVIVSEAGASVYSASELANKEYPDLDVTV 431
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ A+++GR LQ+PLA + + G G+ L+ L G++E D
Sbjct: 432 RGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLA-----GIVE----DCV 482
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+D+N+A + L +ISG+ A ++ G +RK+ + LG+K
Sbjct: 483 NNVGVDLNIATP-----SLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKA 537
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDE 768
+ GFLRV S +A LD+T +HPESY +A+EL K + Y E DL +
Sbjct: 538 YEQCAGFLRVMESKEA---------LDNTSVHPESYKVAKELIKTLGYT---EEDLKNG- 584
Query: 769 DALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHG---FQDWRNQYK 825
K +D +K K N + +EL G D + K
Sbjct: 585 -----------------KLVDIDERVKAKGISN-------LAKELEVGEPTLNDIIKEIK 620
Query: 826 EPSQD--EEF---YMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
+P +D EE SG E L G ++ TVR V A + G++ K
Sbjct: 621 KPGRDPREELPKPIFKSGVIEMKDLKPGMILMGTVRNVSDFGAFVDIGVHQDGLVHKSQM 680
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+D + L D + GD++ +I + R ++ L
Sbjct: 681 ADSFVKHPL-DIVKVGDVVEVRILDVDLKRKRISL 714
>gi|291544171|emb|CBL17280.1| Transcriptional accessory protein [Ruminococcus champanellensis
18P13]
Length = 722
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 167/685 (24%), Positives = 281/685 (41%), Gaps = 158/685 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL DD +VL I D L+KR
Sbjct: 31 IPFIARYRKERTGSL--------------DD----------QVLREIFDRLNYLRNLEKR 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLH 194
K +E R+++ +Q + + ++K+++AA+T EV+D L+
Sbjct: 67 K-------------------EEIRVSITEQDKMTEELAKAIDAAKTLVEVED------LY 101
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
P RPKR T+ S GL E L L +K P
Sbjct: 102 RP-----------YRPKRKTRASVARAHGL-----------EPLARLLLAQK-------P 132
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
PE A+ F QA LQGA + A +IS + +RK +RS+ + +S
Sbjct: 133 GVDPEREAAAFVNPEQEVPDVQAALQGAMDILAEDISDDAQLRKDLRSLIAKSGTISAVA 192
Query: 313 T-PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
P+ +S +++ + +PL K + L + + E+E L+V I LPE + +
Sbjct: 193 ADPEAESVYRTYYDYT-------EPLGKIAHHRVLALDRGEKEGFLKVAISLPE-HMGES 244
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
F HYL G S S E D+ L PS+ +E R+ ++ A + +
Sbjct: 245 F--VVRHYLK-GDSPSGAYVRQAAE----DSCKRLLFPSVEREIRNELTANAAEQAIKVF 297
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFT 490
L + P + N +T PG + ++D +G+V L T
Sbjct: 298 ASNLRQLLMQPPVK---NTVT-----------LGLDPGFRTGCKVAVVDHTGKV---LHT 340
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
+ + + + + DQ++L + + + +G + T+ ++ Y I+ ++++
Sbjct: 341 DVVHITANSAAQVAA---DQQKLKGIIEKWKVTTIAIG----NGTASRESEY-IVAQILK 392
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E R V S + E+ +Y S++++++ P +++ AV++ R LQ+PLA +
Sbjct: 393 ELDRKV-------SYMVVSEAGASVYSASKLAAEEFPEYDVSLRSAVSIARRLQDPLAEL 445
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ ++ LT G++E D N VG+DIN A H + +
Sbjct: 446 VKIDPKAIGVGQYQHDMPKARMDEALT-----GVVE----DCVNSVGVDINTASHSLFSY 496
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
++G+ A ++ GA RK + LGKK + GF+RVR
Sbjct: 497 -----VAGINASVAKNIVAYREENGAFTDRKQLLKVPKLGKKAYEQCAGFIRVREGKNP- 550
Query: 727 SSSQFIDLLDDTRIHPESYGLAQEL 751
LD+T +HPESY A+ L
Sbjct: 551 --------LDNTAVHPESYEAARGL 567
>gi|242280672|ref|YP_002992801.1| RNA binding S1 domain-containing protein [Desulfovibrio salexigens
DSM 2638]
gi|242123566|gb|ACS81262.1| RNA binding S1 domain protein [Desulfovibrio salexigens DSM 2638]
Length = 716
Score = 110 bits (274), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 213/878 (24%), Positives = 358/878 (40%), Gaps = 184/878 (20%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDN-NDDFERTPT 113
+LSI ++ + LL + IPFI+ YRKE SL +EV N +D FE+
Sbjct: 12 ELSIPDKNVKAVVSLLD-EGATIPFISRYRKEATGSL------DEVAVANISDLFEK--- 61
Query: 114 LKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK 173
+ +LDK+ R++ L+S DE +L D + K
Sbjct: 62 ---------LKELDKR------RETVLKSI-------------DE-----QGKLDDGLRK 88
Query: 174 SLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGY 233
++AAET R+++D L+ P YK PKR TK + + GL
Sbjct: 89 RIDAAETMRQLED------LYLP----------YK-PKRKTKGQAAIQKGL--------- 122
Query: 234 SSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPC 293
E L ++ +K DP + + S K S L GAR + A +I+
Sbjct: 123 --EPLAYKIFAQKC-----DPVQEAQAFVSAAKG--VESVDDALAGARDIIAEKIAENTV 173
Query: 294 VRKYVRSIFMDNAVVSTCPT--PDGDSAIDSFHQFAGVKWL--REKPLRKFEDAQWLLIQ 349
R+ VRS+F A++ + PT D D +F W RE P +K + L +
Sbjct: 174 SREAVRSLFERKALIESKPTKAAQADENKDKASKFRD--WFDWRE-PAKKAAGHRILALF 230
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLP 409
+ E +K L+V+I+ PE++ L + +S + Q EL D+ L P
Sbjct: 231 RGERDKFLKVSIR-PEEAEGL-------DILHRKLVRSNSAASKQVELAATDSYKRLLAP 282
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG 469
M E R ++ +A + + + L + P K RVLA PG
Sbjct: 283 QMETELRGMLLEKADTEAINIFAANLREILLAPPLGGK------------RVLA--LDPG 328
Query: 470 -KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD-HQPHVVVL 527
+ V LD+ G ++ +T + KK + R+++ +++ + V +
Sbjct: 329 FRTGAKLVCLDAQGTLLHNETIYPVT--------SEGKKKEAARIVRSLVEKYDIEAVAI 380
Query: 528 GAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
G + T+ ++ + V+E D + ++ +ES +Y S I+ ++ P
Sbjct: 381 G----NGTAGRE-----TEQFVKELDLD-----SSIQVIMVNESGASVYSASEIAREEFP 426
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE---QV 644
V+ AV++GR L +PLA + + K + + ++ G+ E +V
Sbjct: 427 DYDITVRGAVSIGRRLMDPLAELVKI--------DPKSIGVGQYQHDVDQKGLAESLGRV 478
Query: 645 MVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG 704
+ N VG+++N A R LQ +SGLGP AA++ + G +RK+ +
Sbjct: 479 VESCVNMVGVELNTASAR-----LLQSVSGLGPVLAANVIKFREENGPFSSRKELLKVPR 533
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDL 764
LG K F GFLR+R + LD T +HPE Y +AK D+ D+
Sbjct: 534 LGPKAFEQCAGFLRIRGAKNP---------LDGTAVHPERYKAVAGIAK-----DLGADV 579
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQY 824
D + +L L+ ++ E + TL I +EL +D R Q+
Sbjct: 580 AD-----------LIKSSELRAKINLEDYVSE---DLGLPTLKDIMKELEKPGRDPRKQF 625
Query: 825 KEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDW- 883
+ D+ +S L EG ++ V V A + G++ +DD+
Sbjct: 626 EAVKFDDSVKEVS-----DLREGMILNGIVTNVTAFGAFVDIGVHQDGLVHISRMADDFV 680
Query: 884 RDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM 921
RD + +H G L K+ + R ++ L R+S+M
Sbjct: 681 RDP--ATVVHPGQALKVKVLDVDIQRKRISLSMRQSDM 716
>gi|339441267|ref|YP_004707272.1| hypothetical protein CXIVA_02030 [Clostridium sp. SY8519]
gi|338900668|dbj|BAK46170.1| hypothetical protein CXIVA_02030 [Clostridium sp. SY8519]
Length = 717
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 155/686 (22%), Positives = 278/686 (40%), Gaps = 156/686 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE+ SL +EV D +D +
Sbjct: 31 VPFIARYRKEKTGSL-----NDEVLRDLSDRLQ--------------------------- 58
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
Y + E ++I D R +L + K + AAET +D L+ P
Sbjct: 59 -------YLRNLETRQQQIADSIRE--QGKLTPELEKKIFAAETLAAAED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ S+ + GL +A Q+ +K GD
Sbjct: 104 -----------YRPKRKTRASAARERGLQPLAD-----------QILRQKKGD------- 134
Query: 257 TPEEMASNFKCAMFNSSQA-----VLQGARHMAAVEISCEPCVRKYVR-SIFMDNAVVST 310
+PE A +C + + L GA + A +IS R ++R + + S
Sbjct: 135 SPEAEA---RCYINQKKEVPDVETALAGAGDILAEDISERAEFRAWIREKTYRKGILRSD 191
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
D S + ++ FA +P+ + + L + + E+EK L V I PE+ +
Sbjct: 192 ARDSDASSVYERYYSFA-------EPIARVAGHRILALNRGEKEKYLTVHIDAPEE---E 241
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
+ + + G ++SA+ ++ D+ P++ +E R ++ RA+ +
Sbjct: 242 ILTYLNRQIIKTGQTESARFLQK----VIADSYHRLTAPAIERELRKELTDRAEEGAIRV 297
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--V 487
+GK L + P A VL W P + + D++G+++D V
Sbjct: 298 FGKNLGQLLMQPPI------------AGQMVLG--WDPAFRTGCKLAVADATGKILDTAV 343
Query: 488 LFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFK 547
++ Q+K + +R+L+ ++++ + V L ++L + + II
Sbjct: 344 IYPTA----------PQNKTEEAKRVLRRLIEN--YGVTL--ISLGNGTASRESEAIIAD 389
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
++E + V S V +E+ +Y SR+++++ P + A ++ R LQ+PL
Sbjct: 390 FIKELKQPV-------SYVIVNEAGASVYSASRLATEEFPEFDVGQRSAASIARRLQDPL 442
Query: 608 AMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
A + + S + ++ + + +EQV+ D N+VG+D+N A A
Sbjct: 443 AELVKITPE-----SIGVGQYQHDMNQKKLSHALEQVVEDCVNRVGVDLNTA-----SAA 492
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
LQ++SGL AA++ G ++R++ + LG K F GFLR+R
Sbjct: 493 LLQYVSGLTKTTAANIVAYRDTNGRFYSRRELLNVPKLGPKAFEQCAGFLRIRNGKNP-- 550
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAK 753
LD T +HPESYG A+ + +
Sbjct: 551 -------LDATSVHPESYGAAESVLR 569
>gi|188589637|ref|YP_001919919.1| protein tex [Clostridium botulinum E3 str. Alaska E43]
gi|188499918|gb|ACD53054.1| protein tex [Clostridium botulinum E3 str. Alaska E43]
Length = 725
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 175/772 (22%), Positives = 332/772 (43%), Gaps = 132/772 (17%)
Query: 157 DETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRST 214
D+ + +N+Q L + +LE A T EV+D+ + P YK PK+ T
Sbjct: 69 DDIKRLINEQGKLNPEVENALEKATTLTEVEDI-------YRP---------YK-PKKKT 111
Query: 215 KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQ 274
K + GL +A +Q + K E K EE + +
Sbjct: 112 KATMAVARGLKPLAEL---------IQSGVFKGNLNEEASKYINEEKG------VLKEEE 156
Query: 275 AVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLRE 334
A+ QGA + A IS E RK++R + + + + + + ++ + +
Sbjct: 157 AI-QGALDIIAENISDEAKFRKHIRELIIKEGFIESKGDSKDTTPYEMYYDY-------K 208
Query: 335 KPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQ 394
+ ++K + L I + E+EK+L V I + ED + + YL + + ++ +++
Sbjct: 209 EEVKKIPPHRILAINRGEKEKVLSVKITVNEDKIIR--------YLENNILTRNEVLDEK 260
Query: 395 RELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD 454
+L +KD+L + PS+ +E R+ ++ + + + + L + P + K
Sbjct: 261 LKLCIKDSLKRLIYPSIEREIRNELTNIGEEGAINIFKENLKALLLQAPIKGK------- 313
Query: 455 EEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL-TLRSQNVRDQQSKKNDQER 512
+ + PG + +LD +G+ ++ T TL +++ +KK +E
Sbjct: 314 -------VVMGFDPGFRTGCKIAILDETGKFLE--NTAVYPTLPKKDI--VGAKKTLKEL 362
Query: 513 LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESL 572
+ K H V+ LG S S E+I +M++E + G E+ S V E+
Sbjct: 363 IYK----HDVDVISLGNGTASRES-----EEVIAEMIKEIRDEKGKEV---SYVIVSEAG 410
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPL 628
+Y S +++ + P V+ A+++GR LQ+PLA + + G G+
Sbjct: 411 ASVYSASELATKEYPNLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQ---------Y 461
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
++ +TP + + V+ D N VG+D+N+A + L +ISG+ A ++
Sbjct: 462 QHDVTPKKLEQSLAGVVEDSVNTVGVDLNIATP-----SLLTYISGINSTIAQNIVAYRE 516
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
G +RK+ + LG+K + GFLRV S + LD+T +HPESY +A
Sbjct: 517 ELGQFKSRKELLKVKRLGQKAYEQCAGFLRVSESKE---------YLDNTSVHPESYNVA 567
Query: 749 QELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLY 807
++L + + YN+D DL ++ ++ + R ++ + L + + + TL
Sbjct: 568 KKLIETLGYNKD---DLKNNN------LDDIDKRAEVNRINKLSKDL-----DIGELTLK 613
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE-DTLAEGRVVQATVRRVQGQRAICVL 866
I +EL +D R++ P + +G E L G V+ TVR V A +
Sbjct: 614 DIIKELKKPGRDPRDEMPAP------ILKTGIIELKDLKPGMVLNGTVRNVSDFGAFVDI 667
Query: 867 ESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
G++ K ++ + L D + GDI+ I + + R ++ L ++
Sbjct: 668 GVHQDGLVHKSQMANRFVKHPL-DIVKVGDIVKVSILEVDQKRKRISLSMKD 718
>gi|187933135|ref|YP_001884732.1| protein tex [Clostridium botulinum B str. Eklund 17B]
gi|187721288|gb|ACD22509.1| tex domain protein [Clostridium botulinum B str. Eklund 17B]
Length = 723
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 141/614 (22%), Positives = 263/614 (42%), Gaps = 114/614 (18%)
Query: 157 DETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRST 214
D+ + +N+Q L I +LE A T EV+D+ + P YK PK+ T
Sbjct: 69 DDIKRLINEQGKLNPEIENALEKATTLTEVEDI-------YRP---------YK-PKKKT 111
Query: 215 KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQ 274
K + GL +A + + L K +E + + +
Sbjct: 112 KATIAVAKGLKPLAELIQSGAFRGNLNEEASKYINE---------------EKGVLKEEE 156
Query: 275 AVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLRE 334
AV QGA + A IS E RK++R + + + + + + ++ + +
Sbjct: 157 AV-QGALDIIAENISDEAKFRKHIRELIIKEGFIESKGDSKDTTPYEMYYDY-------K 208
Query: 335 KPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQ 394
+ ++K + L I + E+EK+L V I + ED + + YL + V ++ +++
Sbjct: 209 EEVKKIPPHRILAINRGEKEKVLSVKITVNEDKIIR--------YLENNVLTRNEVLDEK 260
Query: 395 RELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD 454
+L +KD+L + PS+ +E R+ ++ + + + + L + P + K
Sbjct: 261 LKLCIKDSLKRLIYPSIEREIRNELTNIGEEGAINIFKENLKALLLQAPIKGK------- 313
Query: 455 EEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN---DQ 510
+ + PG + +LD +G+ L + V KK+ +
Sbjct: 314 -------VVMGFDPGFRTGCKIAILDETGKF----------LENTAVYPTLPKKDIAGTK 356
Query: 511 ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDE 570
+ L + + H V+ LG S S E+I +M++E + G E+ S V E
Sbjct: 357 KVLKELIYKHGVDVISLGNGTASRES-----EEVIAEMIKEIRDEKGKEV---SYVIVSE 408
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLC 626
+ +Y S +++ + P V+ A+++GR LQ+PLA + + G G+
Sbjct: 409 AGASVYSASELATKEYPNLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQ-------- 460
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
++ +TP + + V+ D N VG+D+N+A + L +ISG+ A ++
Sbjct: 461 -YQHDVTPKKLEQSLAGVVEDSVNTVGVDLNIATP-----SLLTYISGINSTIAQNIVAY 514
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
G +RK+ + LG+K + GFLRV S + LD+T +HPESY
Sbjct: 515 REELGQFKSRKELLKVKRLGQKAYEQCAGFLRVSESKE---------YLDNTSVHPESYN 565
Query: 747 LAQELAKEV-YNRD 759
+A++L + + YN+D
Sbjct: 566 VAKKLIEILGYNKD 579
>gi|229829540|ref|ZP_04455609.1| hypothetical protein GCWU000342_01636 [Shuttleworthia satelles DSM
14600]
gi|229791529|gb|EEP27643.1| hypothetical protein GCWU000342_01636 [Shuttleworthia satelles DSM
14600]
Length = 818
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 161/718 (22%), Positives = 299/718 (41%), Gaps = 119/718 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + GL G + L L+ E + EE A
Sbjct: 105 RPKRRTRAMIAREKGLT------GLAETILAQNLTREAL-----------EEAAGYLDPQ 147
Query: 269 M-FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSAIDSFHQF 326
S++ L GA + A +I+ + +R +R + D +VST S ++++ F
Sbjct: 148 KDVTSAEEALAGAGDIIAEQIADDADLRMTIRQMTRDRGRIVSTARDETARSVYETYYDF 207
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSK 386
++P+R+ + L I + E+EK+L V I PE+ + +L +D Y++ +
Sbjct: 208 -------DEPIREVPGHRVLAINRGEKEKILTVKIHAPEEDILRLIAD---RYINAENAY 257
Query: 387 SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR 446
+ + ++ DA + P++ +E RS ++ A+ + +GK L + P
Sbjct: 258 TTPVLT----AVIADAYQRLIAPAIEREIRSALTETAEDGAIRVFGKNLQQLLMQPPI-- 311
Query: 447 KDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQ 503
A VL W P + ++D +G+V+D V+F
Sbjct: 312 ----------AGQTVLG--WDPAFRTGCKLAVVDPTGKVLDTKVIFPTA----------P 349
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDEL 563
Q+K + +++L M+ + + V L ++L + + +II ++ E P + +
Sbjct: 350 QNKLAESKKILAAMI--KKYGVSL--ISLGNGTASRESEQIIVDLLAEIP-------ERV 398
Query: 564 SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGRE 619
S V +E+ +Y S+++S++ P + A ++ R +Q+PLA + + G G+
Sbjct: 399 SYVITNEAGASVYSASKLASEEFPAFDVGQRSAASIARRVQDPLAELVKIDPKSIGVGQY 458
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRK 679
L L G++E D N+VG+D+N A + L +ISG+
Sbjct: 459 QHDMNQKKLSETLG-----GVVE----DSVNRVGVDLNTA-----SASLLSYISGISAPV 504
Query: 680 AASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
A ++ G+ +R+ + LG K F GFLR+ R GQ + LD T
Sbjct: 505 AKNIVAYRDEKGSFTSRRQLLKVPKLGPKAFEQCAGFLRI-RDGQ--------NPLDATS 555
Query: 740 IHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR 799
+HPESY A+EL + +R E+ + I + + ++ + H+ +
Sbjct: 556 VHPESYQAAEELLARLGHR--------PEEISQGGIARIAEEVSDIQKMATELHLGQM-- 605
Query: 800 ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQG 859
TL I EL +D R +P + + + L G V++ TVR V
Sbjct: 606 -----TLEDILTELAKPGRDPRQDMPQPILRRDVLSM-----EDLKPGMVLKGTVRNVVD 655
Query: 860 QRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
A + G++ SD + L + + GDI+ ++ ++ ++ +V L R
Sbjct: 656 FGAFVDIGVHQDGLVHISRISDRFIKHPL-EAVSVGDIVDVQVVAVDLDKQRVALSMR 712
>gi|251779114|ref|ZP_04822034.1| tex domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083429|gb|EES49319.1| tex domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 725
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 182/773 (23%), Positives = 333/773 (43%), Gaps = 134/773 (17%)
Query: 157 DETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRST 214
D+ + +N+Q L + +LE A T EV+D+ + P YK PK+ T
Sbjct: 69 DDIKRLINEQGKLNPEVENALEKATTLTEVEDI-------YRP---------YK-PKKKT 111
Query: 215 KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQ 274
K + GL +A +Q + K E K EE + +
Sbjct: 112 KATMAVARGLKPLAEL---------IQSGVFKGNLNEEASKYINEEKG------VLKEEE 156
Query: 275 AVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLRE 334
A+ QGA + A IS E RK++R + + + + + + ++ + +
Sbjct: 157 AI-QGALDIIAENISDEAKFRKHIRELIIKEGFIESKGDSKDTTPYEMYYDY-------K 208
Query: 335 KPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQ 394
+ ++K + L I + E+EK+L V I + ED + + YL + + ++ +++
Sbjct: 209 EEVKKIPPHRILAINRGEKEKVLSVKITVNEDKIIR--------YLENNILTRNEVLDEK 260
Query: 395 RELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD 454
+L +KD+L + PS+ +E R+ ++ + + + + L + P + K
Sbjct: 261 LKLCIKDSLKRLIYPSIEREIRNELTNIGEEGAINIFKENLKALLLQAPIKGK------- 313
Query: 455 EEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL-TLRSQNVRDQQSKKNDQER 512
+ + PG + +LD +G+ ++ T TL +++ +KK +E
Sbjct: 314 -------VVMGFDPGFRTGCKIAILDETGKFLE--NTAVYPTLPKKDI--VGAKKTLKEL 362
Query: 513 LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESL 572
+ K H V+ LG S S E+I +M++E + G E+ S V E+
Sbjct: 363 IYK----HDVDVISLGNGTASRES-----EEVIAEMIKEIRDEKGKEV---SYVIVSEAG 410
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPL 628
+Y S +++ + P V+ A+++GR LQ+PLA + + G G+
Sbjct: 411 ASVYSASELATKEYPNLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQ---------Y 461
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
++ +TP + + V+ D N VG+D+N+A + L +ISG+ A ++
Sbjct: 462 QHDVTPKKLEQSLAGVVEDSVNTVGVDLNIATP-----SLLTYISGINSTIAQNIVAYRE 516
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
G +RK+ + LG+K + GFLRV S + LD+T +HPESY +A
Sbjct: 517 ELGQFKSRKELLKVKRLGQKAYEQCAGFLRVSESKE---------YLDNTSVHPESYNVA 567
Query: 749 QELAKEV-YNRDIEGDL-NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETL 806
++L + + YN+D DL N++ D ++ E V+ L K D I E TL
Sbjct: 568 KKLIETLGYNKD---DLKNNNLDDIDKRAE-VKGINKLSK----DLDIGEL-------TL 612
Query: 807 YLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE-DTLAEGRVVQATVRRVQGQRAICV 865
I +EL +D R++ P + +G E L G V+ TVR V A
Sbjct: 613 KDIIKELKKPGRDPRDEMPTP------ILKTGIIELKDLKPGMVLNGTVRNVSDFGAFVD 666
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
+ G++ K ++ + L D + GDI+ I + + R ++ L ++
Sbjct: 667 IGVHQDGLVHKSQMANRFVKHPL-DIVKVGDIVKVSILEVDQKRKRISLSMKD 718
>gi|168213729|ref|ZP_02639354.1| RNA-binding protein [Clostridium perfringens CPE str. F4969]
gi|170714808|gb|EDT26990.1| RNA-binding protein [Clostridium perfringens CPE str. F4969]
Length = 720
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 155/658 (23%), Positives = 270/658 (41%), Gaps = 111/658 (16%)
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW 331
+ + QGA + + IS RK++R+ + ++ + + + + ++ +
Sbjct: 153 NEEEAFQGAMDIISEIISDNADYRKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDY----- 207
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLW 391
++P+R + L I + E+EK+L V + +D + YL+ V K ++
Sbjct: 208 --KEPVRTIPSHRILAINRGEKEKILSVKVTCNDDKII--------DYLNKKVLKGNKIT 257
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
+ E +KD+ + PS+ +E RS ++ + + + + L + P + K
Sbjct: 258 DKYLEESIKDSFKRLIYPSIEREIRSELTSKGEEGAIDIFKANLKALLMQAPIKGK---- 313
Query: 452 TPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQ 510
+ + PG + +LD +G+ V+ T QN D+
Sbjct: 314 ----------VVMGFDPGFRTGCKVAILDETGKFVE--NTTVYPTAPQNRIDETI----- 356
Query: 511 ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDE 570
L K + H V+ LG S S E+I KM++E + G E L V E
Sbjct: 357 STLKKLIKKHGVQVISLGNGTASRES-----EEVIAKMLKEIKEETGKE---LFYVIVSE 408
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLC 626
+ +Y S +++ + P V+ A+++GR LQ+PLA + + G G+
Sbjct: 409 AGASVYSASELANKEYPDLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQK 468
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
L+ L G++E D N VG+D+N+A + L +ISG+ A ++
Sbjct: 469 KLDESLA-----GIVE----DCVNNVGVDLNIATP-----SLLSYISGINASIAKNIVDY 514
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
G +RK+ + LG+K + GFLRV S +A LD+T +HPESY
Sbjct: 515 REENGKFKSRKELLKVKRLGQKAYEQCAGFLRVMESKEA---------LDNTSVHPESYK 565
Query: 747 LAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRET 805
+A+EL K + Y E DL + K +D +K K N
Sbjct: 566 VAKELIKTLGYT---EEDLKNG------------------KLVDIDERVKAKGISN---- 600
Query: 806 LYLIRRELIHG---FQDWRNQYKEPSQD--EEF---YMISGETE-DTLAEGRVVQATVRR 856
+ +EL G D + K+P +D EE SG E L G ++ TVR
Sbjct: 601 ---LAKELEVGEPTLNDIIKEIKKPGRDPREELPKPIFKSGVIEMKDLKPGMILMGTVRN 657
Query: 857 VQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
V A + G++ K +D + L D + GDI+ +I + R ++ L
Sbjct: 658 VSDFGAFVDIGVHQDGLVHKSQMADKFVKHPL-DIVKVGDIVEVRILDVDLKRKRISL 714
>gi|160934895|ref|ZP_02082281.1| hypothetical protein CLOLEP_03770 [Clostridium leptum DSM 753]
gi|156866348|gb|EDO59720.1| Tex-like protein N-terminal domain protein [Clostridium leptum DSM
753]
Length = 722
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 133/550 (24%), Positives = 241/550 (43%), Gaps = 86/550 (15%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQ---LGLQLSLEKMGDELEDPKETPEEMASNF 265
RPKR T+ + + GL +A + Y+ E+ + ++ E + E E ETPE+
Sbjct: 105 RPKRMTRATKAKERGLEPLAQRI-YAQEKDSPYPIDMAAEFVNPEKE--VETPED----- 156
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN-AVVSTCPTPDGDSAIDSFH 324
L GA + A EIS + +R+ +R I + VVS PD DS ++
Sbjct: 157 ----------ALSGALDIIAEEISDDAGIRRRLRVIALSQGVVVSRAAKPDEDSVYSQYY 206
Query: 325 QFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGV 384
+ +P K + L I + E E+ L+V+++L +D + + S +
Sbjct: 207 DY-------REPAAKIAGHRVLAIDRGEREEFLKVSLELDQDKAMNIVN-------SVAL 252
Query: 385 SKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY 444
+ + E L DA + PS+ +E RS +S A+ + + L N + P
Sbjct: 253 KGPSPCYEAVSEAAL-DAYTRLIFPSVERELRSTLSENAQEAAIKVFSVNLRNLLMQPPV 311
Query: 445 QRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ 503
+ K +A PG + ++D++G V+D TG + R Q
Sbjct: 312 KGK--------------VAMGLDPGYRTGCKVAVVDATGRVLD---TGVIYPTHSQSRVQ 354
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDEL 563
++K + + + +Q V+ +G S + +++ +++ P+ + +
Sbjct: 355 EAKA----LVSRMIQKYQVEVIAIGN---GTASKETEMF--TAEVLSNLPQ---QDKERC 402
Query: 564 SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSW 623
+ + E+ +Y S++++++ P ++ AV++ R LQ+PLA + + + +
Sbjct: 403 AYMVVSEAGASVYSASKLAAEEFPQFDLTLRSAVSIARRLQDPLAELVKIDPKAIGVGQY 462
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
+ + L DE G V+ D N VG+D+N A + L+ ISGL + ++
Sbjct: 463 QHDMPKKRL--DEALG---GVVEDCVNNVGVDLNTA-----SPSLLERISGLSAAVSKNI 512
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
+ GA +R + + LG K FV GFLRV S ++LD+T +HPE
Sbjct: 513 VKYREENGAFTSRNELKKVNKLGPKAFVQCAGFLRVPESK---------NVLDNTGVHPE 563
Query: 744 SYGLAQELAK 753
SYG A+EL K
Sbjct: 564 SYGAAKELLK 573
>gi|118443081|ref|YP_878976.1| S1 RNA-binding domain-containing protein [Clostridium novyi NT]
gi|118133537|gb|ABK60581.1| S1 RNA binding domain protein [Clostridium novyi NT]
Length = 718
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 169/763 (22%), Positives = 309/763 (40%), Gaps = 132/763 (17%)
Query: 161 LALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCS 220
+A ++L D + + ET EV+D+ F +PK+ T+ +
Sbjct: 75 IAEQEKLTDELESKINKCETLTEVEDIYRPF-----------------KPKKRTRATIAV 117
Query: 221 KAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGA 280
+ GL +A + LS E G+ E KE E A L GA
Sbjct: 118 EKGLKPLAE----------VILSGEFTGNIEEYAKEFINEEKEVMTIA------DALNGA 161
Query: 281 RHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF 340
+ + A IS E RK++R N V+ + D + + +++++ + + K
Sbjct: 162 KDIVAEAISDEAEYRKWIREYVRKNGVIECSGSSDEPTPYEMYYEYS-------EAVSKI 214
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK 400
+ L I + E+EK+L V + D + YL+ K ++ + E ++
Sbjct: 215 PSHRILAINRGEKEKILSVKVVCDTDKII--------DYLNKKSKKDNEITDKFIEESVE 266
Query: 401 DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPR 460
D+L + PS+ +E R+ ++ + + + + L + P + K
Sbjct: 267 DSLKRLIYPSIEREIRAELTDKGEEGAIEVFKANLSALLVQAPIKGK------------- 313
Query: 461 VLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
+ + PG + +LD +G+++D + +ND E +K + +
Sbjct: 314 -VVLGYDPGFRTGCKIAVLDDTGKLLDTATVYA-----------TAPQNDVEGSIKILKE 361
Query: 520 ----HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRL 575
H VV LG S S E++ ++++E ++ G + L V E+ +
Sbjct: 362 LVYKHDVDVVSLGNGTASRES-----EEVLARLIDEVKKETGKD---LFYVVVSEAGASV 413
Query: 576 YENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPD 635
Y S ++S + P +++ A+++GR LQ+P+A + + P S + ++ + P
Sbjct: 414 YSASELASKEYPDINVSIRGAISIGRRLQDPMAELVKI-DPK----SIGVGQYQHDVAPK 468
Query: 636 EKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFT 695
+ V+ DV N VG+D+N+A + L +ISG+ A ++ G
Sbjct: 469 RLDESLSGVVEDVVNSVGVDLNIATP-----SLLSYISGVNSTIAKNIVEYREENGKFKN 523
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
RK+ + LG K F GFLRV S + +LD+T +HPESY +E K +
Sbjct: 524 RKELLKVKRLGPKAFEQCAGFLRVTESNE---------VLDNTAVHPESYKATKEFLKML 574
Query: 756 --YNRDIEGDLNDDEDA--LEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRR 811
DI+ DD DA E IE++ K+ E TL I +
Sbjct: 575 GYTEEDIKNGKLDDIDAKVKESGIENL-----------------AKELEVGVPTLKDIIK 617
Query: 812 ELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLA 871
E+ +D R + +P + I + L G ++ TVR V A +
Sbjct: 618 EIKKPGRDPREELPKPIFKKGIVDI-----NQLKPGMMLTGTVRNVADFGAFVDIGVHQD 672
Query: 872 GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
G++ SD + + L D + GDI+ ++ + + R ++ L
Sbjct: 673 GLVHISQLSDKFVKNPL-DIVKVGDIVEVRVLEVDEKRGRISL 714
>gi|340624445|ref|YP_004742898.1| RNA binding S1 domain-containing protein [Methanococcus maripaludis
X1]
gi|339904713|gb|AEK20155.1| RNA binding S1 domain-containing protein [Methanococcus maripaludis
X1]
Length = 713
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 135/560 (24%), Positives = 242/560 (43%), Gaps = 107/560 (19%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + GL ++ +L L+++ LE P E E N K
Sbjct: 105 RPKRKTRATIAESKGLKPLS------------ELILKQI---LEKPIEELAEGFVNPKLE 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST-CPTPDGDSAIDSFHQFA 327
+ NS + + GA+ + A EIS RK++R ++S D S + +++++
Sbjct: 150 V-NSIEDAISGAKDIIAEEISDNADYRKFIRENTFSKGIISVKAKNVDEKSVYEMYYEYS 208
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ + K + L I + E EK+LQV I P + ++ D + K+
Sbjct: 209 -------EAINKIPGHRILAINRGESEKVLQVKIDAPVE------------FIQDWIFKN 249
Query: 388 AQLWNDQRELILKD-ALDNF---LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
L N + ILKD +D++ + PS+ +E R+ ++ +A++ + + K L + P
Sbjct: 250 IILENSKTSEILKDTVIDSYKRLISPSIEREIRNSLTEKAENGAIEVFSKNLKQLLLQPP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K W P + ++D +G+V+D T N +
Sbjct: 310 IKNKT--------------VLGWDPAFRTGCKLAVVDETGKVLDK--TVVYPTEPHN-KI 352
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
++KK +E ++K+ +D VV +G S S I+ ++++E DV +
Sbjct: 353 AETKKQVKELIIKYDID----VVAIGNGTASRES-----EHIVSEILKEVVNDVYY---- 399
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
V +E+ +Y S + SD+ P ++ A+++ R LQ+PLA + + G G+
Sbjct: 400 ---VIVNEAGASVYSASELGSDEFPEYDVGIRSAISIARRLQDPLAELVKIDPKSIGVGQ 456
Query: 619 ---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
++ KL E G + + V N VG+D+N A + L ++SG+
Sbjct: 457 YQHDMNQKKLS---------ESLGAVVESSV---NSVGVDLNTA-----SVSLLNYVSGI 499
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ G +RK+ + LGKK F GFLR+ +L
Sbjct: 500 NIGIAKNIVAYRTENGKFESRKELLKVSKLGKKAFEQCAGFLRIPEGK---------NLF 550
Query: 736 DDTRIHPESYGLAQELAKEV 755
D+T +HPESY +A+ L E+
Sbjct: 551 DNTGVHPESYKIAENLLNEL 570
>gi|374295039|ref|YP_005045230.1| transcriptional accessory protein [Clostridium clariflavum DSM
19732]
gi|359824533|gb|AEV67306.1| transcriptional accessory protein [Clostridium clariflavum DSM
19732]
Length = 717
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 190/849 (22%), Positives = 349/849 (41%), Gaps = 171/849 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE + + ND +VL ++D L+ R
Sbjct: 32 IPFIARYRKE-------------MTGELND-----------QVLRELYDRLMYLRNLEAR 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K EE R+ DE +L D I +S+ A T +E++D+ +
Sbjct: 68 K------------EEVLRLIDE-----QGKLTDEIKESINKAVTLQEIEDI-------YR 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
P RPKR T+ + + GL +A + G S+E++ D ++
Sbjct: 104 P----------YRPKRRTRATIAKEKGLEPLAKILFDQDIRSG---SIEELAAPFIDAEK 150
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+ N+ + L GA + A EIS RK +R +F + + +
Sbjct: 151 S------------VNTVEEALNGAMDIIAEEISDNAEFRKAIREMFYRLGTIVSKAKKEE 198
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
DS ++ F+ +P+ K + L I + E+E+ LQV I +P + +
Sbjct: 199 DSVYRMYYDFS-------EPVAKIASHRILAINRGEKEEFLQVKIDVPTERVT------- 244
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
++ S + K + + E ++D+ D + PS+ +E R+ ++ +A+ + + L
Sbjct: 245 DYLKSKCIKKVRSITTEYVERAIEDSYDRLIFPSVEREVRNELTEKAQEQAMKVFATNLK 304
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLR 496
N + P + K + + A R C G ++D +G+V+D T +
Sbjct: 305 NLLLQPPVKGK---VVLGLDPAYRT-GCKIG---------VVDETGKVLD---TAVIYPT 348
Query: 497 SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV 556
+ ++SKK ++ + K H+ ++ +G S + +I+ + ++++E R V
Sbjct: 349 PPQNKIEESKKVMKDLIEK----HKVDIISIGN---GTASKETEIF--VAELLKEIDRKV 399
Query: 557 GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL--- 613
+ + E+ +Y S++ +++ P ++ A+++ R LQ+PLA + +
Sbjct: 400 YY-------MVVSEAGASVYSASKLGAEEFPEYDVALRSAISIARRLQDPLAELVKIDPK 452
Query: 614 -CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFI 672
G G+ L L+ G++E D N VG+D+N A A L +I
Sbjct: 453 SIGVGQYQHDMNQKRLGECLS-----GVVE----DCVNSVGVDLNTA-----SPALLSYI 498
Query: 673 SGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
SG+ A ++ G R++ LG+K F GFLR+ G+
Sbjct: 499 SGINSSIARNIVEYRETNGKFKNREELKKVKKLGEKAFEQCAGFLRI-PDGE-------- 549
Query: 733 DLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DLLKTYLLD 791
++LD+T +HPESY A +L + + +E VR R D LK + +
Sbjct: 550 NVLDNTSVHPESYNAACKLL----------------EIMGYTMEDVRQRKLDKLKQEVEN 593
Query: 792 RHIKEKKRE--NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
+ + E E TL I EL+ +D R++ +P + I + L G V
Sbjct: 594 KGMAEIAAEIGVGVPTLIDIINELLKPGRDPRDELPKPVLLTDVLHI-----EDLKPGMV 648
Query: 850 VQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNR 909
+ TVR V A + G++ + SD + + + + + GDI+ +I + R
Sbjct: 649 LTGTVRNVADFGAFVDIGVHQDGLVHISELSDRYVKNPM-EVVSVGDIVKVRILDVDVKR 707
Query: 910 YQVFLVCRE 918
++ L +E
Sbjct: 708 KRISLSMKE 716
>gi|429767401|ref|ZP_19299600.1| Tex-like protein [Clostridium celatum DSM 1785]
gi|429181009|gb|EKY22204.1| Tex-like protein [Clostridium celatum DSM 1785]
Length = 720
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 202/880 (22%), Positives = 370/880 (42%), Gaps = 184/880 (20%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L IS + ++LL + +PFI+ YRKE+ L +DD R
Sbjct: 11 ELGISLKQVQNVINLLD-EGNTVPFISRYRKEQTGGL-------------SDDVLR---- 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
K+ + L + +L K +E+ R+ DE +L D I K+
Sbjct: 53 KFFERLTYLRNL-------------------KERKEDVLRLIDE-----QGKLNDDIVKA 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
LE AET EV+D+ + P YK+ KR T+ + + GL +A
Sbjct: 89 LEKAETLTEVEDI-------YRP---------YKQKKR-TRATIALEKGLKPLAD----- 126
Query: 235 SEQLGLQLSLEKM--GDELEDPKETPEEMASNFKCAMFNSSQAVL------QGARHMAAV 286
L LE + GD +N + + VL G+ + A
Sbjct: 127 -------LILEGIFKGD------------INNEAVKYIDDEKKVLTVEDAINGSLDIVAE 167
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWL 346
IS + RK++R + + + + + + +A + +++++ + + K + L
Sbjct: 168 IISDDASFRKWIRELVVREGKIESKGSSEEPTAFEMYYEYS-------EDVHKIPAHRIL 220
Query: 347 LIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
I + E+EK+L V I ED K+ + YL + + K ++ +L +KD+L
Sbjct: 221 AINRGEKEKVLSVKIISNED---KIIT-----YLQNRLLKGNTNTDEYLKLAIKDSLKRL 272
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
+ PS+ +E R+ ++ + + ++ + + L + P + K + +
Sbjct: 273 IYPSIEREIRNELTDKGEEGAILIFKENLKALLMQPPIKGK--------------VVMGY 318
Query: 467 GPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
PG + +LDS+G+ ++ T T+ ++V + +KK +E + K+ +D V+
Sbjct: 319 DPGFRTGCKVAVLDSTGKFLEK-ATVYPTVPKRDV--EGTKKVLKELIYKYDVD----VI 371
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
LG S S E+I +M+ E + G E L+ V E+ +Y S +++ +
Sbjct: 372 SLGNGTASRES-----EEVISEMLTEIKNESGKE---LAYVIVSEAGASVYSASELAAKE 423
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMI 641
P ++ A+++GR LQ+P+A + + G G+ ++ +TP +
Sbjct: 424 YPDLDVTIRGAISIGRRLQDPMAELVKIDPKAIGVGQ---------YQHDVTPKRLEESL 474
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVT 701
V+ D N+VG+D+N A + L +I+G+ A ++ G +RK+ +
Sbjct: 475 SGVVEDSVNKVGVDLNTATP-----SLLTYIAGINASIANNIVAYRDEVGGFKSRKELLK 529
Query: 702 AHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIE 761
LG+K F GFLRV S + LD+T +HPESY A +L +I
Sbjct: 530 VKRLGQKAFEQCAGFLRVMESKEP---------LDNTSMHPESYAAAGKLI------EIL 574
Query: 762 GDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWR 821
G +D + ++ D D +K L+ +KE E TL I +EL +D R
Sbjct: 575 GYTKED-----LKNRNLSDIEDRVKEKTLNSLVKE--LEIGELTLKDIIKELQKPGRDPR 627
Query: 822 NQYKEPSQDEEFYMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYS 880
+P + +G + L G V+ TVR V A + G++ K +
Sbjct: 628 EDMPKP------ILKTGVIDLKDLTPGMVLLGTVRNVSDFGAFVDIGVHQDGLVHKSQMA 681
Query: 881 DDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
+ + L D + GD++ KI + + R ++ L ++ E
Sbjct: 682 NKFVKHPL-DIVKVGDVIKVKIMEVDEKRKRISLTMKDVE 720
>gi|449706018|gb|EMD45948.1| transcription elongation factor spt6, putative [Entamoeba
histolytica KU27]
Length = 1230
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 151/673 (22%), Positives = 280/673 (41%), Gaps = 96/673 (14%)
Query: 107 DFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ 166
D+ + + + +LW I + D+++ L K K ++ K+ EE R AL
Sbjct: 246 DYSKIDSYQVLDMLWMIWNYDEEYSLFCKEKEKVKEGLKEIPEE---------RRALYSV 296
Query: 167 LFDSISKSLEAAETEREVDDVDLKFNL-HFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
DS+ +E + + DD L++ F P + Q + K+S Y +
Sbjct: 297 ELDSV---IELPDLKLISDDFLLRYRKDQFDPLK------QISKGKKS--YQILIQKNFK 345
Query: 226 EVASKFGYSSEQLGLQL------SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQG 279
E+ FG ++++L + ++ +M E+ P+ +A+ F + ++ G
Sbjct: 346 EMLDGFGLTADELAQNIKSNFKKTIPRMCPEI------PQAIAARMVSPEFPEPKNIMSG 399
Query: 280 ARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRK 339
A+ + A E + VRK+ + +A +ST PTP GD I+ FH++A +K LR KP+
Sbjct: 400 AKMIFATEFAYNWYVRKFFFEEGLKDAELSTDPTPKGDEVINVFHKYAIIKRLRRKPIGL 459
Query: 340 FEDAQWLL-IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+L I A E LL +TI++P++ + + L G + W ++
Sbjct: 460 MRGKTDILNIFNAVNEGLLTMTIEIPQNIIENAST-----LLVGG--DDLEEWRKYKKET 512
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV------GPYQRKDNDIT 452
L+ A F+ P +V++ + + A L+ E L ++ V G Y + ++I+
Sbjct: 513 LEFAFKYFITPYVVEQLKIELRKEAVDCLIHEAQYNLKRRIDVAQHFALGKYSKDIDNIS 572
Query: 453 PDEEAAPRVLACCWGPGKPETTFVMLDS-SGEVVDVLFTGCLTLRSQNVRDQQSKKNDQE 511
A + K V +++ +GE ++ + G SK + E
Sbjct: 573 ----ALEKKFVGGIVFSKEGMMGVKVNAMTGEFIEGKYFG----------KNNSKYGEYE 618
Query: 512 RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
LK VV + A S+ + E+ V ++
Sbjct: 619 EELKKFFGRDTLVVGIEANTQRYVSVTATM----------------KNNSEIECVGINKD 662
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVA-LGRYLQNPLAMVATLCGPGREILSWKLCPLEN 630
L R+Y+ + G+ ++ A A + R L NP+A +C ++LS KL L+N
Sbjct: 663 LGRIYKK------ETKGEMSELEFAGACVCRQLINPIAEFVHICCTKEKMLSIKLHWLQN 716
Query: 631 FLTPDEK---YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
L E+ + + + ++ + N G+DIN I L +++GLGP + +
Sbjct: 717 TLNESEQNKMFSALNETLITIINSKGVDINQCIEYPHMEKMLDYVNGLGPIRTDYIFSHF 776
Query: 688 VRAGAIFTRKDFVTAHGLGKK---VFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
+ T + F+ K V N +GF+ + S + +S + + LD TRIH
Sbjct: 777 RQYDFKVTSRKFLNETFKTDKLETVVDNCIGFIII--SPKYSSKNLY---LDQTRIHFSR 831
Query: 745 YGLAQELAKEVYN 757
YGLA+ + + +
Sbjct: 832 YGLAETIVDDAFT 844
>gi|254302494|ref|ZP_04969852.1| transcriptional accessory protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322686|gb|EDK87936.1| transcriptional accessory protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 722
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 164/760 (21%), Positives = 325/760 (42%), Gaps = 134/760 (17%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y+ L E + +A +F + + ++GA + A
Sbjct: 123 PLAEKF-YTENNL-----------------EEIQNLAKDFITEEVPTVEDAIEGAMLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + ++++A + + K
Sbjct: 165 QNISEKAEYRERIREIYLKYSIIESKASKKAAELDEKKVYNDYYEYA-------EKVEKM 217
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK 400
+ L + + E+E +L V ++L + ++ S + + + ++ + + I+K
Sbjct: 218 PSHRILALNRGEKEDILTVHLRLEDSDRERIESMILKEFPKNDLAVTYKE-------IIK 270
Query: 401 DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEAAP 459
D+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 271 DSLDRLIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRTGC 330
Query: 460 RVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMM 518
+V +G K T F ++++ + + + ++ +++ LK +
Sbjct: 331 KVAVIDKYGFYKENTVFFLVEA-------------------MHNPKQIQDARDKFLKLVK 371
Query: 519 DHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYEN 578
+ +V +G S + + + + +++E +V + + +E+ +Y
Sbjct: 372 KYDIDIVSIGN---GTASRETETF--VANIIKEEKLNVKY-------LIVNEAGASVYSA 419
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTP 634
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 420 SKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL-- 477
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 478 -------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGNFK 525
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ + ++
Sbjct: 526 NRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAILEK 576
Query: 755 VYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELI 814
I DL + L++A R+R LK++ + KE E ET+ + L+
Sbjct: 577 -----IGFDLEKYNNELDVA----RER---LKSFDYKKFAKE--NEFGLETVKDVYEALL 622
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+D R+ +++P + I D L G ++ TVR V A + +L
Sbjct: 623 KDRRDPRDDFEKPLLKSDILNI-----DNLEVGMELEGTVRNVVKFGAFIDIGLKNDALL 677
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+ SD + D S L G I+ KIK + K+R +V L
Sbjct: 678 HISEISDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 716
>gi|183230505|ref|XP_654539.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169802876|gb|EAL49153.2| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 1231
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 151/673 (22%), Positives = 280/673 (41%), Gaps = 96/673 (14%)
Query: 107 DFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ 166
D+ + + + +LW I + D+++ L K K ++ K+ EE R AL
Sbjct: 247 DYSKIDSYQVLDMLWMIWNYDEEYSLFCKEKEKVKEGLKEIPEE---------RRALYSV 297
Query: 167 LFDSISKSLEAAETEREVDDVDLKFNL-HFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
DS+ +E + + DD L++ F P + Q + K+S Y +
Sbjct: 298 ELDSV---IELPDLKLISDDFLLRYRKDQFDPLK------QISKGKKS--YQILIQKNFK 346
Query: 226 EVASKFGYSSEQLGLQL------SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQG 279
E+ FG ++++L + ++ +M E+ P+ +A+ F + ++ G
Sbjct: 347 EMLDGFGLTADELAQNIKSNFKKTIPRMCPEI------PQAIAARMVSPEFPEPKNIMSG 400
Query: 280 ARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRK 339
A+ + A E + VRK+ + +A +ST PTP GD I+ FH++A +K LR KP+
Sbjct: 401 AKMIFATEFAYNWYVRKFFFEEGLKDAELSTDPTPKGDEVINVFHKYAIIKRLRRKPIGL 460
Query: 340 FEDAQWLL-IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+L I A E LL +TI++P++ + + L G + W ++
Sbjct: 461 MRGKTDILNIFNAVNEGLLTMTIEIPQNIIENAST-----LLVGG--DDLEEWRKYKKET 513
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV------GPYQRKDNDIT 452
L+ A F+ P +V++ + + A L+ E L ++ V G Y + ++I+
Sbjct: 514 LEFAFKYFITPYVVEQLKIELRKEAVDCLIHEAQYNLKRRIDVAQHFALGKYSKDIDNIS 573
Query: 453 PDEEAAPRVLACCWGPGKPETTFVMLDS-SGEVVDVLFTGCLTLRSQNVRDQQSKKNDQE 511
A + K V +++ +GE ++ + G SK + E
Sbjct: 574 ----ALEKKFVGGIVFSKEGMMGVKVNAMTGEFIEGKYFG----------KNNSKYGEYE 619
Query: 512 RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
LK VV + A S+ + E+ V ++
Sbjct: 620 EELKKFFGRDTLVVGIEANTQRYVSVTATM----------------KNNSEIECVGINKD 663
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVA-LGRYLQNPLAMVATLCGPGREILSWKLCPLEN 630
L R+Y+ + G+ ++ A A + R L NP+A +C ++LS KL L+N
Sbjct: 664 LGRIYKK------ETKGEMSELEFAGACVCRQLINPIAEFVHICCTKEKMLSIKLHWLQN 717
Query: 631 FLTPDEK---YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
L E+ + + + ++ + N G+DIN I L +++GLGP + +
Sbjct: 718 TLNESEQNKMFSALNETLITIINSKGVDINQCIEYPHMEKMLDYVNGLGPIRTDYIFSHF 777
Query: 688 VRAGAIFTRKDFVTAHGLGKK---VFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
+ T + F+ K V N +GF+ + S + +S + + LD TRIH
Sbjct: 778 RQYDFKVTSRKFLNETFKTDKLETVVDNCIGFIII--SPKYSSKNLY---LDQTRIHFSR 832
Query: 745 YGLAQELAKEVYN 757
YGLA+ + + +
Sbjct: 833 YGLAETIVDDAFT 845
>gi|374340553|ref|YP_005097289.1| transcriptional accessory protein [Marinitoga piezophila KA3]
gi|372102087|gb|AEX85991.1| transcriptional accessory protein [Marinitoga piezophila KA3]
Length = 717
Score = 106 bits (265), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 155/649 (23%), Positives = 276/649 (42%), Gaps = 109/649 (16%)
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
L + E E+ A + S + V +G +++ + +RK +R + + +
Sbjct: 128 LSEEIENIEQEAQKYINDKVKSVEEVFEGVKYIIGQYFAHNEKIRKILRDDLLKYGRIES 187
Query: 311 CPTP---DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS 367
+ + D +H+F+ + +RK + + L I + E+E +L V + L E
Sbjct: 188 NKKKKFIEEKTKYDMYHEFS-------QEIRKIPNYRVLSINRGEKEGVLSVKLSLEEKY 240
Query: 368 LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD----NFLLPSMVKEARSLMSGRA 423
+ KL+ + YL+ ++ I+K+ LD N L PS+ E R+L++ RA
Sbjct: 241 IEKLY----KFYLTK---------YEENNKIIKEGLDYGFKNMLFPSISNEVRNLLTQRA 287
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSG 482
+ + + K L + P + K RVLA PG + V LD SG
Sbjct: 288 EESSIELFSKNLKELLLTPPLKNK------------RVLAI--DPGYRTGCKVVALDESG 333
Query: 483 EVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIY 542
+ F T+ V Q + ++ +L F+ + +++V+G S +
Sbjct: 334 K-----FLENATIYP--VPPQNEFEKSEKIVLDFIKKYNLNLIVIGNGTASRET-----Q 381
Query: 543 EIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRY 602
I +V++H ++G L ++ DES +Y S++++ + P V+ A+++GR
Sbjct: 382 SFIVDVVKKH--NLG-----LKYIFADESGASVYSASKLAAKEFPDLDVTVRGAISIGRR 434
Query: 603 LQNPLAMVATL------CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDI 656
+Q+PLA + G + ++ KL EK +E + V N VG+++
Sbjct: 435 IQDPLAEFVKIDPKSLGVGQYQHDMNQKLL--------KEK---LENTVEHVVNLVGVNL 483
Query: 657 NLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGF 716
N A A LQ+ISG+ P+ A ++ + G RK+ + G G K F A GF
Sbjct: 484 NTA-----SAALLQYISGITPKLAENIVKYREENGFFKERKELLKVKGFGPKAFEQAAGF 538
Query: 717 LRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIE 776
LR+ L+ T IHPESY +L E E LN ++ +E
Sbjct: 539 LRIFDGNNP---------LEVTGIHPESYEKTIQLL-EYLGFKPEDILNSEK------LE 582
Query: 777 HVRDRPDLLKTYLLDRHIKE--KKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFY 834
+R++ LK Y + +K+ ++ E TL I EL +D R++ +P E+
Sbjct: 583 TLREK---LKKYYGENELKKLAEQLEIGEYTLKDIITELQKPGRDLRDELPQPLLYEDVL 639
Query: 835 MISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDW 883
T D L G ++Q V + A L G++ K + S+ +
Sbjct: 640 -----TFDDLKVGMILQGRVTNITDFGAFVDLGIKENGLIHKSNMSEKY 683
>gi|154485040|ref|ZP_02027488.1| hypothetical protein EUBVEN_02758 [Eubacterium ventriosum ATCC
27560]
gi|149733993|gb|EDM50112.1| Tex-like protein N-terminal domain protein [Eubacterium ventriosum
ATCC 27560]
Length = 711
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 141/628 (22%), Positives = 266/628 (42%), Gaps = 116/628 (18%)
Query: 144 YKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVD 203
Y + EE+ + + D + ++ D I + AET VDD+ F
Sbjct: 59 YLRNLEEKKKTVVDS--ITEQGKMTDEIMSKIAMAETIVAVDDIYRPF------------ 104
Query: 204 EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMAS 263
RPKR T+ + GL +A F L EK + E+ K
Sbjct: 105 -----RPKRKTRATEAKAKGLEPLADIF----------LKQEKNKNLEEEAK-----AFV 144
Query: 264 NFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSAIDS 322
N + + N ++A+ QGA+ + A +S RK +R+I + + +VS P+ + ++
Sbjct: 145 NEEKGVANVAEAI-QGAKDIIAETVSDNDEFRKAIRNIVVKHGLIVSNTKNPEEKTPYEN 203
Query: 323 FHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSD 382
++ ++ + + K + L I + E+EK+L V I++PE+++ + +
Sbjct: 204 YYDYS-------EGVNKIPGHRILAINRGEKEKVLNVKIEMPEENIIASL----DKVIIK 252
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
G S+ L + ++D + P++ +E RS ++ +A+ + +G+ L +
Sbjct: 253 GESQFKPLLKEA----IEDGFKRLIKPAIEREIRSQLTEKAEDGAITVFGQNLKQLLMQP 308
Query: 443 PYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVR 501
P A VL W P + ++D++G+V L+T + + +
Sbjct: 309 PI------------AGRNVLG--WDPAFRTGCKLAVVDNTGKV---LYTTVIFPTAPQNK 351
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
+SKK +L + + ++ LG S S +I +++E P V +
Sbjct: 352 VAESKK----IVLDIIKKYNVSLISLGNGTASRES-----EAVIVDIIKECPTKVEY--- 399
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
+ +E+ +Y S++++++ P + A ++ R LQ+PLA + + G G
Sbjct: 400 ----IIVNEAGASVYSASKLATEEFPNFDVGQRSATSMARRLQDPLAELVKIEPKAIGVG 455
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFISGLG 676
+ L+ L+ ++ D N VG+D+N A APL +++SG+
Sbjct: 456 QYQHDMNQKKLDEALS---------NIVEDCVNNVGVDLNTA------SAPLLEYVSGIS 500
Query: 677 PRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLD 736
A ++ G +RKD ++ LG K F GF+R+R + LD
Sbjct: 501 KTIAKNIVEYREENGQFQSRKDLLSVAKLGPKAFEQCAGFMRIREGKEP---------LD 551
Query: 737 DTRIHPESYGLAQELAKE--VYNRDIEG 762
T +HPESY A++L K+ +DI G
Sbjct: 552 YTSVHPESYSSAKKLLKKYGFTTKDILG 579
>gi|422339726|ref|ZP_16420683.1| S1 RNA binding domain protein [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355370569|gb|EHG17949.1| S1 RNA binding domain protein [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 722
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 169/762 (22%), Positives = 327/762 (42%), Gaps = 138/762 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y + L E + +A +F + + ++GA + A
Sbjct: 123 PLAEKF-YIANNL-----------------EEIQNLAKDFITEEVPTIEDAVEGAMLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + ++++A + + K
Sbjct: 165 QNISEKAEYRERIREIYLKYSIIESKASKKAAELDEKKVYNDYYEYA-------EKVEKM 217
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD--CKEHYLSDGVSKSAQLWNDQRELI 398
+ L + + E+E +L V ++L EDS + + +E +D VS + I
Sbjct: 218 PSHRILALNRGEKEDILTVHLRL-EDSDRERIENMILREFSKNDLVSTYKE--------I 268
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEA 457
+KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 269 IKDSLDRLIIPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRT 328
Query: 458 APRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF 516
+V +G + T F ++++ + + + ++ +++ LK
Sbjct: 329 GCKVAVIDKYGFYRENTVFFLVEA-------------------MHNPKQIQDARDKFLKL 369
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ ++ +V +G S + + + + +++E +V + + +E+ +Y
Sbjct: 370 VKKYEIDIVSIGN---GTASRETETF--VANIIKEEKLNVKY-------LIVNEAGASVY 417
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFL 632
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 418 SASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL 477
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 478 ---------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGN 523
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ +
Sbjct: 524 FKNRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAIL 574
Query: 753 KEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRE 812
++ I DL + L++A R+R LK++ + KE E ET+ +
Sbjct: 575 EK-----IGFDLEKYNNELDVA----RER---LKSFDYKKFAKE--NEFGLETVKDVYEA 620
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 621 LLKDRRDPRDDFEKPLLKSDILNI-----DNLEVGMELEGTVRNVVKFGAFIDIGLKNDA 675
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 676 LLHISEISDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 716
>gi|283798764|ref|ZP_06347917.1| protein YhgF [Clostridium sp. M62/1]
gi|291073448|gb|EFE10812.1| Tex-like protein N-terminal domain protein [Clostridium sp. M62/1]
Length = 713
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 149/680 (21%), Positives = 288/680 (42%), Gaps = 148/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ND+ R +LD++
Sbjct: 31 IPFIARYRKEATGSL-------------NDEVLR--------------NLDERL------ 57
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
Y + E+ ++ + ++L + + + + A+T V+D+ L +
Sbjct: 58 ------KYLRNLEDRKEQVI--ASIGEQEKLTEELERKIREAKTLVAVEDLYLPY----- 104
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK- 255
RPKR T+ + GL +A +Q+ LQ E+ P
Sbjct: 105 ------------RPKRRTRAGIAREKGLMPLA-------DQIFLQ--------EMSVPAI 137
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
E E S K +++ L GA + A IS R Y+R I M+ ++++ +
Sbjct: 138 EEAEGFVSEEKGVA--TAKEALDGAMDILAERISETAEYRTYIRKITMEEGMLTSSARNE 195
Query: 316 GDSAI-DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
++++ + ++QF+ +P++K + L + + E+EK L V I+ PE+ K+
Sbjct: 196 KETSVYEMYYQFS-------EPVKKAAGHRILALNRGEKEKFLNVKIEAPEE---KILRY 245
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
++ + +A + + +L+D+ + P++ +E R+ ++ +A++ + +GK
Sbjct: 246 LEKQIIKKDSRNTAPVL----QAVLEDSYRRLIGPAIEREIRAGLTEKAEAGAIRVFGKN 301
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTG 491
L + P A RV+ W P + ++D G+V+D V+F
Sbjct: 302 LKQLLMQPP-------------VADRVV-LGWDPAFRTGCKLAVVDGLGKVLDTVVIFPT 347
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
Q+K + +++LK ++ + ++L + + ++I ++++E
Sbjct: 348 A----------PQNKVEESKQILKNLIRKYG----ISLISLGNGTASRESEQVIVELLKE 393
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
P V + V +E+ +Y SR+++++ P + AV++ R LQ+PLA +
Sbjct: 394 IPEKVQY-------VIVNEAGASVYSASRLATEEFPKFDVGQRSAVSIARRLQDPLAELV 446
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+ + S + ++ + +E V+ D N VG+D+N A + L++
Sbjct: 447 KI-----DPKSIGVGQYQHDMNQKNLGQALEGVVEDCVNSVGVDLNTA-----SASLLEY 496
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
ISG+ A ++ G R++ + LG K F GFLR+ R G+
Sbjct: 497 ISGITKTVAKNIVAYREENGGFHNRRELLKVPKLGPKAFEQCAGFLRI-RGGE------- 548
Query: 732 IDLLDDTRIHPESYGLAQEL 751
+ LD T +HPESYG A+ L
Sbjct: 549 -NPLDATSVHPESYGAAEAL 567
>gi|435852917|ref|YP_007314236.1| transcriptional accessory protein [Halobacteroides halobius DSM
5150]
gi|433669328|gb|AGB40143.1| transcriptional accessory protein [Halobacteroides halobius DSM
5150]
Length = 717
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 136/576 (23%), Positives = 242/576 (42%), Gaps = 105/576 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+ ++ T+ + + GL +A F G S+ + E DPK+ E++AS
Sbjct: 107 KQRQKTRAAKAKEKGLEPLADLFLAQDITTG---SVVERCQEFIDPKQELEDIAS----- 158
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+LQG + + A ++ +P RK R I D + D + ++++F
Sbjct: 159 -------ILQGVKDIIAQHVADQPKSRKLAREITFDKGKLVVKGKVDEITEYQTYYEF-- 209
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQV-TIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
E+ + K Q L I + E E +L+V + L E +N L K +++D
Sbjct: 210 -----EEEIGKLAPYQILAINRGEHEDILKVKVVTLKEQIINNL----KAEFITD----- 255
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
++ + E + DA L P++ +E RS + A+ + + K L N + P K
Sbjct: 256 KSIFKEVLEEAIDDAYHRLLAPAIAREVRSYLKEEAEEHAIDVFAKNLRNLLMQPPLIDK 315
Query: 448 DNDITPDEEAAPRVLAC--CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNV--RDQ 503
+VLA + G +LD +G++ L++ N+ +
Sbjct: 316 ------------KVLAIDPAFRTG---CKIAVLDKAGQL----------LKTTNIYPHEP 350
Query: 504 QSK-KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
Q+K + +E+L+ + + VV +G +C + + E+I + +
Sbjct: 351 QNKWQVAKEKLIDLITAYNLDVVAIGN-GTACRETETLVSEVI-----------AESLPK 398
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
L V +E +Y S ++ ++ P +++ A+++GR LQ+PLA + + G G
Sbjct: 399 LRYVIVNEDGASVYSASPLAREEFPKLDVSLRGAISIGRRLQDPLAELVKINPKHLGVGL 458
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
LE L E+V+ V N VG+D+N A A L+ I+G+
Sbjct: 459 YQHDLNQSNLEEAL---------EKVVESVVNYVGVDLNTA-----SSALLEHIAGITSA 504
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A + G TR++ +G+G F A GFLR++ LD T
Sbjct: 505 VADKIVSYRHDKGEFTTRQELKNVYGIGPNRFTQAAGFLRIKAGDNP---------LDQT 555
Query: 739 RIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEM 773
IHPESY +AQ+L ++ +N DL + E LE+
Sbjct: 556 AIHPESYQVAQKLLAKIGFN---ASDLFNQEQRLEL 588
>gi|291562742|emb|CBL41558.1| Transcriptional accessory protein [butyrate-producing bacterium
SS3/4]
Length = 716
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 159/688 (23%), Positives = 288/688 (41%), Gaps = 160/688 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDK--KWLL-L 133
IPFIA YRKE SL ND+ R +LD+ K+L L
Sbjct: 31 IPFIARYRKEVTGSL-------------NDEVLR--------------NLDERLKYLRGL 63
Query: 134 QKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNL 193
+ RK+ + + I D+ +L + + K +E AET V+D+ L F
Sbjct: 64 EDRKTQILA-----------SIEDQGKLTAD------LKKKIEEAETMVAVEDLYLPF-- 104
Query: 194 HFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELED 253
RPKR T+ S + GL +A + + LQ++
Sbjct: 105 ---------------RPKRKTRASMAKERGLEPLA-------DTILLQVT---------- 132
Query: 254 PKETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN-AVVST 310
KE E +A+ + ++A + GA+ + A IS R Y+R++ + ++VS
Sbjct: 133 -KEPIETLAAQYVSEEKGVADAKAAIDGAKDILAERISEVAKYRAYIRNVTKEEGSIVSA 191
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS--- 367
+S + ++ E+ +RK + L + + E+EK+L V I PE+
Sbjct: 192 AKDEKTESVYEMYYH-------HEELVRKCAGHRILALNRGEKEKILTVKIAAPEEKILR 244
Query: 368 -LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSW 426
LNK+ +++ + + ++ D+ + + P++ +E R+LM+ +A+
Sbjct: 245 YLNKMV-----------ITRENPVTTPVLQEVIADSYNRLIAPAIEREVRNLMTEKAEDG 293
Query: 427 LLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV 485
+ +GK L + P A RV+ W P + ++D++G+V+
Sbjct: 294 AIKIFGKNLEQLLMQPPI-------------AGRVV-LGWDPAFRTGCKLAVVDATGKVL 339
Query: 486 DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
D + Q+K D ++ LK +++ + + L +V S + + +II
Sbjct: 340 DTVVIYPTA--------PQNKVEDAKKTLKKLIEK--YKISLISVGNGTASRESE--QII 387
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
+ ++E P V + V +E+ +Y S++++++ P + AV++ R LQ+
Sbjct: 388 AEFIKEIPEHVQY-------VIVNEAGASVYSASKLATEEFPKFDVGQRSAVSIARRLQD 440
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PLA + + + ++ + L+ E G V+ D N+VG+D+N A
Sbjct: 441 PLAELVKIDPKSIGVGQYQHDMNQKHLS--EALG---NVVEDCVNKVGVDLNTA-----S 490
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
+ L++ISG+ A ++ GA R+ + LG K F GF+R+
Sbjct: 491 ASLLEYISGISKVIAKNIVAYREENGAFTNRRQLLKVAKLGPKAFEQCAGFMRIAGGDNP 550
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAK 753
LD T +HPESY A EL K
Sbjct: 551 ---------LDGTSVHPESYKAALELLK 569
>gi|407043643|gb|EKE42067.1| hypothetical protein ENU1_033950, partial [Entamoeba nuttalli P19]
Length = 1227
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 150/673 (22%), Positives = 280/673 (41%), Gaps = 96/673 (14%)
Query: 107 DFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ 166
D+ + + + +LW I + D+++ + K K ++ K+ EE R AL
Sbjct: 243 DYSKIDSYQVLDMLWMIWNYDEEYSIFCKEKEKVKEGLKEIPEE---------RRALYSV 293
Query: 167 LFDSISKSLEAAETEREVDDVDLKFNL-HFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
DS+ +E + + DD L++ F P + Q + K+S Y +
Sbjct: 294 ELDSV---IELPDLKLISDDFLLRYGKDQFDPLK------QISKGKKS--YQILIQKNFK 342
Query: 226 EVASKFGYSSEQLGLQL------SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQG 279
E+ FG ++++L + ++ +M E+ P+ +A+ F + ++ G
Sbjct: 343 EMLDGFGLTADELAQNIKSNFKKTIPRMCPEI------PQAIAARMVSPEFPEPKNIMSG 396
Query: 280 ARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRK 339
A+ + A E + VRK+ + +A +ST PTP GD I+ FH++A +K LR KP+
Sbjct: 397 AKMIFATEFAYNWYVRKFFFEEGLKDAELSTDPTPKGDEVINVFHKYAIIKRLRRKPIGL 456
Query: 340 FEDAQWLL-IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+L I A E LL +TI++P++ + + L G + W ++
Sbjct: 457 MRGKTDILNIFNAVNEGLLTMTIEIPQNIIENAST-----LLVGG--DDLEEWRKYKKET 509
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV------GPYQRKDNDIT 452
L+ A F+ P +V++ + + A L+ E L ++ V G Y + ++I+
Sbjct: 510 LEFAFKYFITPYVVEQLKIELRKEAVDCLIHEAQYNLKRRIDVAQHFALGKYSKDIDNIS 569
Query: 453 PDEEAAPRVLACCWGPGKPETTFVMLDS-SGEVVDVLFTGCLTLRSQNVRDQQSKKNDQE 511
A + K V +++ +GE ++ + G SK + E
Sbjct: 570 ----ALEKKFVGGIVFSKEGMMGVKVNAMTGEFIEGKYFG----------KNNSKYGEYE 615
Query: 512 RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
LK VV + A S+ + E+ V ++
Sbjct: 616 EELKKFFGRDTLVVGIEANTQRYVSVTATM----------------KNNSEIECVGINKD 659
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVA-LGRYLQNPLAMVATLCGPGREILSWKLCPLEN 630
L R+Y+ + G+ ++ A A + R L NP+A +C ++LS KL L+N
Sbjct: 660 LGRIYKK------ETKGEMSELEFAGACVCRQLINPIAEFVHICCTKEKMLSIKLHWLQN 713
Query: 631 FLTPDEK---YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
L E+ + + + ++ + N G+DIN I L +++GLGP + +
Sbjct: 714 TLNESEQNKMFSALNETLITIINSKGVDINQCIEYPHMEKMLDYVNGLGPIRTDYIFSHF 773
Query: 688 VRAGAIFTRKDFVTAHGLGKK---VFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
+ T + F+ K V N +GF+ + S + +S + + LD TRIH
Sbjct: 774 RQYDFKVTSRKFLNETFKTDKLETVVDNCIGFIII--SPKYSSKNLY---LDQTRIHFSR 828
Query: 745 YGLAQELAKEVYN 757
YGLA+ + + +
Sbjct: 829 YGLAETIVDDAFT 841
>gi|376259753|ref|YP_005146473.1| transcriptional accessory protein [Clostridium sp. BNL1100]
gi|373943747|gb|AEY64668.1| transcriptional accessory protein [Clostridium sp. BNL1100]
Length = 718
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 187/850 (22%), Positives = 340/850 (40%), Gaps = 173/850 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE V + ND R + ++ L + +LD++
Sbjct: 32 IPFIARYRKE-------------VTGELNDQVLR----ELYERLVYLRNLDER------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
E+ RR+ DE +L + I KSL+ A T +E++D+ +
Sbjct: 68 ------------REDVRRLIDE-----QGKLTEEIVKSLDKAVTLQEIEDI-------YR 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
P ++ KR T+ S + GL +A+ YS QL + L ++ + DP +
Sbjct: 104 PYKI----------KRKTRASVAREKGLEPLATII-YS--QLPSRTPLNEIAAKYIDPAK 150
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
S+ + GA + A EIS RK +R I N +V + D
Sbjct: 151 G------------VGSADEAIAGALDIIAEEISDNAEFRKALREIIFKNGLVVSSGKKDE 198
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
DS ++ F ++P+ K + L + + E+E L V I + ED C
Sbjct: 199 DSVYRMYYDF-------KEPVSKIARHRVLALNRGEKEDFLNVRIDVNEDL-------CL 244
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
+ +D + K+ E ++D+ + PS+ ++ R+ ++ ++ + + + L
Sbjct: 245 KFLKADTIKKTNPEMARYVESAVEDSFKRLIFPSLERDIRNQLTELSEDQAIKVFSENLR 304
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLR 496
N + P + RV+ + ++D +G+V++ T
Sbjct: 305 NLLLQPPVK-------------DRVVLGLDPAYRTGCKLAVVDETGKVLET--TVIYPTP 349
Query: 497 SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV 556
QN D+ KK Q + ++ ++ +G S + +I+ + ++++E R V
Sbjct: 350 PQNKIDEAKKKVKQ-----LIEKYKVDIISIGN---GTASKESEIF--VVELLKEIERKV 399
Query: 557 GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP 616
+ + E+ +Y S++ +++ P ++ AV++ R LQ+PLA + +
Sbjct: 400 YY-------MVVSEAGASVYSASKLGAEEFPDFDVALRSAVSIARRLQDPLAELVKIDPK 452
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFISGL 675
+ ++ + L DE G V+ D N VG+D+N A APL ++SG+
Sbjct: 453 AIGVGQYQHDMNQKRL--DESLG---GVVEDCVNNVGVDLNTA------SAPLLSYVSGI 501
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ G R + LG K F GFLR+ G ++L
Sbjct: 502 STAIAKNVVEYREENGKFKARNELKKVKKLGNKTFEQCAGFLRITDGG---------NIL 552
Query: 736 DDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIK 795
D+T +HPESY A+ L + + ++E V+D+ K LD +
Sbjct: 553 DNTSVHPESYKAAKLLLEN----------------MGYSLEDVKDK----KLAGLDTKVA 592
Query: 796 EKKRENKRE-------TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGR 848
+ E TL I EL+ +D R++ +P + ED L G
Sbjct: 593 QAGTSQVAEMLGIGIPTLKDIMSELLKPGRDPRDELPKPMLHSDVL----NMED-LKAGM 647
Query: 849 VVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
++ TVR V A + G++ +D + + + D + GDI+ K+ +
Sbjct: 648 ILTGTVRNVADFGAFVDIGVHQDGLVHISQLADKFVKNPM-DVVAVGDIVKVKVLEVDVE 706
Query: 909 RYQVFLVCRE 918
R ++ L RE
Sbjct: 707 RKRISLTMRE 716
>gi|115376634|ref|ZP_01463864.1| RNA binding S1 [Stigmatella aurantiaca DW4/3-1]
gi|115366377|gb|EAU65382.1| RNA binding S1 [Stigmatella aurantiaca DW4/3-1]
Length = 777
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 210/483 (43%), Gaps = 67/483 (13%)
Query: 275 AVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLRE 334
A L GAR + A ++ + +R+ R + + + P F + + E
Sbjct: 158 AALAGARDICAERVAEDAALRRTARELCASRGRLGSSVVPAKKGETTKFEAY----YAHE 213
Query: 335 KPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQ 394
+PL + + L + + E E++L+V + P D + + + S V+K L+ +
Sbjct: 214 EPLAQAPSHRILALLRGEAEEVLRVKLSFPGDEVKGMLT-------SRVVTKPQALFAQE 266
Query: 395 RELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD 454
+DA + L PS+ E R+ + RA + +G+ L + + + P
Sbjct: 267 LRAAAEDAWERLLEPSLESELRAELKERADRQAIGVFGENLRHLL-----------LAPP 315
Query: 455 EEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERL 513
P V PG + VMLD +G VV+ TL ++ D++++ Q
Sbjct: 316 AGTRPVV---ALDPGLRTGVKLVMLDDTGTVVE-----TATLYTERSPDERARAARQFAA 367
Query: 514 LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM-DELSIVYGDESL 572
+ + H P ++ +G S + E R+V ++ ++ +V E
Sbjct: 368 V--VQKHHPELIAVGNGTGS-------------REAEGFVREVLQQLGTKVPVVSVSEQG 412
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFL 632
+Y S ++ ++ P +++ AV++GR LQ+PLA + + + ++ + +L
Sbjct: 413 ASVYSASEVAREEFPHLDVSLRGAVSIGRRLQDPLAELVKIDPKSIGVGQYQHDVEQGWL 472
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+K G +V+ N VG+D+N A Q L+ +SG+GP A L + GA
Sbjct: 473 --KKKLG---EVVDSCVNAVGVDVNTA---SPQL--LEHVSGVGPSLAKKLVAHRSQKGA 522
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
TR++ + GLG K F A GFLRVR + LD + +HPE Y + + +A
Sbjct: 523 FSTRRELLKVSGLGPKTFEQAAGFLRVRGP----------EPLDASAVHPERYPVVERMA 572
Query: 753 KEV 755
K++
Sbjct: 573 KDL 575
>gi|168205596|ref|ZP_02631601.1| RNA-binding protein [Clostridium perfringens E str. JGS1987]
gi|169344206|ref|ZP_02865188.1| RNA-binding protein [Clostridium perfringens C str. JGS1495]
gi|169297664|gb|EDS79764.1| RNA-binding protein [Clostridium perfringens C str. JGS1495]
gi|170662934|gb|EDT15617.1| RNA-binding protein [Clostridium perfringens E str. JGS1987]
Length = 720
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 210/487 (43%), Gaps = 72/487 (14%)
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW 331
+ + LQGA + + IS RK++R+ + ++ + + + + ++ +
Sbjct: 153 NEEEALQGAMDIISEIISDNADYRKWIRNFVQKDGIIQVKGSSEEQTTYEMYYDY----- 207
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLW 391
++P+R + L I + E+EK+L V + ++ + YL+ V + ++
Sbjct: 208 --KEPVRTIPSHRILAINRGEKEKILSVKVTCNDERII--------DYLNKKVLRENKIT 257
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
+ E +KD+ + PS+ +E R+ ++ + + + + L + P + K
Sbjct: 258 DKYLEESIKDSFKRLIYPSIEREIRNELTSKGEEGAIDIFKANLKALLMQAPIKGK---- 313
Query: 452 TPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQ 510
+ + PG + +LD +G+ V+ T QN D+
Sbjct: 314 ----------VVMGFDPGFRTGCKVAILDETGKFVE--NTTVYPTAPQNRIDETIST--- 358
Query: 511 ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDE 570
L K + H V+ LG S S E+I KM++E + G E L V E
Sbjct: 359 --LKKLIKKHGVQVISLGNGTASRES-----EEVIAKMLKEIKEETGKE---LFYVIVSE 408
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLC 626
+ +Y S +++ + P V+ A+++GR LQ+PLA + + G G+
Sbjct: 409 AGASVYSASELANKEYPDLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQK 468
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
L+ L G++E D N VG+D+N+A + L +ISG+ A ++
Sbjct: 469 KLDESLA-----GIVE----DCVNNVGVDLNIATP-----SLLSYISGINASIAKNIVDY 514
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
G +RK+ + LG+K + GFLRV S +A LD+T +HPESY
Sbjct: 515 REENGKFKSRKELLKVKRLGQKAYEQCAGFLRVMESKEA---------LDNTSVHPESYK 565
Query: 747 LAQELAK 753
+A+EL K
Sbjct: 566 VAKELIK 572
>gi|220930899|ref|YP_002507807.1| RNA binding S1 domain-containing protein [Halothermothrix orenii H
168]
gi|219992209|gb|ACL68812.1| RNA binding S1 domain protein [Halothermothrix orenii H 168]
Length = 722
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 155/655 (23%), Positives = 287/655 (43%), Gaps = 99/655 (15%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPTPDGDSAIDSFHQFAG 328
S + V QGAR + A +S + +RK +R I F + STC DS D ++
Sbjct: 153 LESIEDVYQGARDIIAEWVSDDAGIRKEIRKITFKQGVIQSTC----KDSETDDEGKYEM 208
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
RE P+ K + L I + E++++LQV + PE+ + +L D + + +
Sbjct: 209 YYDYRE-PVSKIPPHRVLAINRGEKDEVLQVKVLAPEEDIIELIKDRVVN------NPES 261
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ND E I KD + PS+ +E R+ ++ +A+ + + K L N + + P R
Sbjct: 262 IFYNDIIEAI-KDGYKRLIAPSIEREVRNSLTEKAEEHAINIFSKNLRN-LLLQPPLRGH 319
Query: 449 NDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
+ D P C ++D +G ++D T + QS+
Sbjct: 320 TVMGID----PAYRTGC--------KVCVVDPTGRLLD---TATIYPHPP-----QSRTG 359
Query: 509 DQERLLKFMM-DHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+ ++++K ++ ++Q + +G + T+ ++ + MV + +++ + +++ V
Sbjct: 360 EAKKVVKGLINEYQVTTIAIG----NGTASRETEF-----MVADIIKELKN--TQVNYVI 408
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSW 623
+E+ +Y S+++ + P ++ A+++ R LQ+PLA + + G G
Sbjct: 409 VNEAGASVYSASKLARKEFPELDVAMRGAISIARRLQDPLAELVKIDPKSIGVGLYQHDV 468
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
LE L V+ N VG+D+N A + L++++G+ R A+++
Sbjct: 469 NQKNLEKSLG---------NVVESAVNYVGVDLNTA-----SPSLLKYVAGINSRVASNI 514
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
+ G TR + + GLGKK F A GFLR+ LD+T IHPE
Sbjct: 515 VKYREENGKFETRDELLKVKGLGKKTFTQAAGFLRIPDGTNP---------LDNTPIHPE 565
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKR 803
SY A+ L ++V + + D+ D E ++ VR+ D I K R K
Sbjct: 566 SYQAAKGLLQDVGFKLL--DITDKE-----KLKEVREELD---------SINIKSRAEKL 609
Query: 804 ETLYLIRRELIHGFQ----DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQG 859
ET ++++ + D R++ +P F + ED L G ++Q TVR V
Sbjct: 610 ETGIPTLKDIVDALKKPGRDPRDELPKPI----FRSDVLKMED-LEAGMLLQGTVRNVVD 664
Query: 860 QRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
A + + G++ + S D+ D L + GD + KI + + R ++ L
Sbjct: 665 FGAFVDIGVKVDGLVHISEMSHDYVDDPLK-VVQVGDTVKVKILEVDERRNRISL 718
>gi|310819429|ref|YP_003951787.1| s1 RNA binding domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309392501|gb|ADO69960.1| S1 RNA binding domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 778
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 210/483 (43%), Gaps = 67/483 (13%)
Query: 275 AVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLRE 334
A L GAR + A ++ + +R+ R + + + P F + + E
Sbjct: 158 AALAGARDICAERVAEDAALRRTARELCASRGRLGSSVVPAKKGETTKFEAY----YAHE 213
Query: 335 KPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQ 394
+PL + + L + + E E++L+V + P D + + + S V+K L+ +
Sbjct: 214 EPLAQAPSHRILALLRGEAEEVLRVKLSFPGDEVKGMLT-------SRVVTKPQALFAQE 266
Query: 395 RELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD 454
+DA + L PS+ E R+ + RA + +G+ L + + + P
Sbjct: 267 LRAAAEDAWERLLEPSLESELRAELKERADRQAIGVFGENLRHLL-----------LAPP 315
Query: 455 EEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERL 513
P V PG + VMLD +G VV+ TL ++ D++++ Q
Sbjct: 316 AGTRPVV---ALDPGLRTGVKLVMLDDTGTVVE-----TATLYTERSPDERARAARQFAA 367
Query: 514 LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM-DELSIVYGDESL 572
+ + H P ++ +G S + E R+V ++ ++ +V E
Sbjct: 368 V--VQKHHPELIAVGNGTGS-------------REAEGFVREVLQQLGTKVPVVSVSEQG 412
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFL 632
+Y S ++ ++ P +++ AV++GR LQ+PLA + + + ++ + +L
Sbjct: 413 ASVYSASEVAREEFPHLDVSLRGAVSIGRRLQDPLAELVKIDPKSIGVGQYQHDVEQGWL 472
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+K G +V+ N VG+D+N A Q L+ +SG+GP A L + GA
Sbjct: 473 --KKKLG---EVVDSCVNAVGVDVNTA---SPQL--LEHVSGVGPSLAKKLVAHRSQKGA 522
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
TR++ + GLG K F A GFLRVR + LD + +HPE Y + + +A
Sbjct: 523 FSTRRELLKVSGLGPKTFEQAAGFLRVRGP----------EPLDASAVHPERYPVVERMA 572
Query: 753 KEV 755
K++
Sbjct: 573 KDL 575
>gi|134045501|ref|YP_001096987.1| RNA-binding S1 domain-containing protein [Methanococcus maripaludis
C5]
gi|132663126|gb|ABO34772.1| RNA binding S1 domain protein [Methanococcus maripaludis C5]
Length = 713
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 135/559 (24%), Positives = 235/559 (42%), Gaps = 105/559 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + GL ++ +L L+ LEK EL PE
Sbjct: 105 RPKRKTRATIAEIKGLKPLS--------ELILKQILEKPIKELAKEFINPE--------L 148
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST-CPTPDGDSAIDSFHQFA 327
NS + + GA+ + A EIS RK++R +++ D S + +++++
Sbjct: 149 EVNSIEDAISGAKDIIAEEISDNADYRKFIRETTFSKGIIAVKAKNVDEKSVYEMYYEYS 208
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ + K + L I + E EKLLQV I P + ++ D + K+
Sbjct: 209 -------EAVNKIPGHRILAINRGESEKLLQVKIDAPVE------------FIQDWIFKN 249
Query: 388 AQLWNDQRELILKD-ALDNF---LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
L N ILKD +D++ + PS+ +E R+ ++ +A++ + + K L + P
Sbjct: 250 ILLENSDTSEILKDTVIDSYKRLIAPSIEREIRNNITEKAENGAIEVFSKNLKQLLLQPP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K W P + ++D +G+V+D T N +
Sbjct: 310 IKNKT--------------VLGWDPAFRTGCKIAVVDETGKVLDK--TVVYPTEPHN-KV 352
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
++KK +E ++K H VV +G S S I+ ++++E +DV +
Sbjct: 353 AETKKQVKELIIK----HDIDVVAIGNGTASRES-----EHIVSEILKEVVKDVYY---- 399
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
V +E+ +Y S + S++ P ++ A+++ R LQ+PLA + + G G+
Sbjct: 400 ---VIVNEAGASVYSASELGSEEFPEYDVGIRSAISIARRLQDPLAELVKIDPKSIGVGQ 456
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL--G 676
L L+ V+ N VG+D+N A + L ++SG+ G
Sbjct: 457 YQHDMNQKKLSESLSA---------VVESSVNSVGVDLNTA-----SVSLLNYVSGINIG 502
Query: 677 PRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLD 736
K + RS G +RK+ + LGKK F GFLR+ +L D
Sbjct: 503 IAKNIVIYRS--ENGKFESRKELLKVSKLGKKAFEQCAGFLRIPEGK---------NLFD 551
Query: 737 DTRIHPESYGLAQELAKEV 755
+T +HPESY +A+ L E+
Sbjct: 552 NTGVHPESYKIAENLLNEL 570
>gi|295092746|emb|CBK78853.1| Transcriptional accessory protein [Clostridium cf. saccharolyticum
K10]
Length = 713
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 148/680 (21%), Positives = 288/680 (42%), Gaps = 148/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ND+ R +LD++
Sbjct: 31 IPFIARYRKEATGSL-------------NDEVLR--------------NLDERL------ 57
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
Y + E+ ++ + ++L + + K + A+T V+D+ L +
Sbjct: 58 ------KYLRNLEDRKEQVI--ASIGEQEKLTEELEKKIREAKTLVAVEDLYLPY----- 104
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQ-LSLEKMGDELEDPK 255
RP+R T+ + GL +A +Q+ LQ +S+ +
Sbjct: 105 ------------RPRRRTRAGIAREKGLMPLA-------DQIFLQDMSIPAI-------- 137
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
E E S K + + L GA + A IS R Y+R I M+ ++++ +
Sbjct: 138 EEAERFVSEEKGVA--TPKEALDGAMDILAERISETAEYRTYIRKITMEEGMLTSSARNE 195
Query: 316 GDSAI-DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
++++ + ++QF+ +P++K + L + + E+EK L V I+ PE+ K+
Sbjct: 196 KETSVYEMYYQFS-------EPVKKAAGHRILALNRGEKEKFLNVKIEAPEE---KILRY 245
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
++ + +A + + +L+D+ + P++ +E R+ ++ +A++ + +GK
Sbjct: 246 LEKQIIKKDSRNTAPVL----QAVLEDSYRRLIGPAIEREIRAGLTEKAEAGAIRVFGKN 301
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTG 491
L + P A RV+ W P + ++D G+V+D V+F
Sbjct: 302 LKQLLMQPP-------------VADRVV-LGWDPAFRTGCKLAVVDGLGKVLDTVVIFPT 347
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
Q+K + +++LK ++ + ++L + + ++I ++++E
Sbjct: 348 A----------PQNKVEESKQILKNLIRKYG----ISLISLGNGTASRESEQVIVELLKE 393
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
P V + V +E+ +Y SR+++++ P + AV++ R LQ+PLA +
Sbjct: 394 IPEKVQY-------VIVNEAGASVYSASRLATEEFPKFDVGQRSAVSIARRLQDPLAELV 446
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+ + S + ++ + +E V+ D N VG+D+N A + L++
Sbjct: 447 KI-----DPKSIGVGQYQHDMNQKNLGQALEGVVEDCVNSVGVDLNTA-----SASLLEY 496
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
ISG+ A ++ G R++ + LG K F GFLR+ R G+
Sbjct: 497 ISGITKTVAKNIVAYREENGGFHNRRELLKVPKLGPKAFEQCAGFLRI-RGGE------- 548
Query: 732 IDLLDDTRIHPESYGLAQEL 751
+ LD T +HPESYG A+ L
Sbjct: 549 -NPLDATSVHPESYGAAEAL 567
>gi|427413380|ref|ZP_18903572.1| hypothetical protein HMPREF9282_00979 [Veillonella ratti
ACS-216-V-Col6b]
gi|425716196|gb|EKU79182.1| hypothetical protein HMPREF9282_00979 [Veillonella ratti
ACS-216-V-Col6b]
Length = 839
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 182/841 (21%), Positives = 345/841 (41%), Gaps = 155/841 (18%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE +T LK D++ +++R
Sbjct: 33 VPFIARYRKE-----------------------KTGELK-----------DEQLREIEER 58
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
L++ ++R EE R I ++ +++ ++ ++E A +E++D+ L +
Sbjct: 59 IKYLRNLEQRR-EEIVRSITEQ------EKMTPELATAIEGAMKLQELEDLYLPY----- 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPK+ T+ S + GL +A QL L+ D+ ED
Sbjct: 107 ------------RPKKRTRASIARERGLEPLA------------QLMLD---DKTEDTAS 139
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
T E + + F + ++A LQGA + A ++S R Y+R V T T D
Sbjct: 140 TVESLTAPFITEDVSDAEAALQGAMDIVAEDVSDRADFRAYLRDAIWRQGKVKTVMTGDE 199
Query: 317 DSA-IDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS-LNKLFSD 374
++A D Q E+P+ + + L I + E+ L+V++ P+++ ++ + +
Sbjct: 200 ETAETDEVRQLFLHYADYEEPIHQMPSHRILAINRGEKLGALKVSLTAPDETYIDYMVAA 259
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
E GV+ + + + + DA + P+M +E R ++ A + +G
Sbjct: 260 LPE----TGVAA----LKEYKAIAVADAYKRLIFPAMEREIRKTLTENADEQAIKVFGTN 311
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
L N + P A V+ PG + ++D G V+D G
Sbjct: 312 LRNLLLQPPL-------------AGHVI-MGLDPGYRMGCKMAVIDVQGNVLD---QGIY 354
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
L S R +++ K D ++ + V +L N + + + + + +++E+
Sbjct: 355 HLTSGE-RGKEAAKKDMVACIR-----KWKVTLLSIGNGTASY---ETEQFVSQLIEDEK 405
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
D + + +E+ +Y S+++ ++LP +++ AV++ R +Q+PLA +
Sbjct: 406 LDCHY-------IITNEAGASVYSASKLAIEELPDLDVSIRGAVSIARRVQDPLAESVKI 458
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFIS 673
+ S + ++ + + ++QV+ V N VG+++N A A L+ ++
Sbjct: 459 -----DPKSIGVGQYQHDVNQKQLSETLDQVVETVVNHVGVELNTA-----SPAILEHVA 508
Query: 674 GLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
G+ A ++ GA RK+ + LG F GFLR++ S
Sbjct: 509 GISAAVANNIVTYRKDNGAFNNRKELLKVKRLGPAAFTQCAGFLRIKDSQNP-------- 560
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH 793
LD+T +HPESY LA+ + K + +E LND ++A H K L++
Sbjct: 561 -LDNTPVHPESYDLAETIIKNLGFTLVE--LNDKA---KLADFHT-------KLALVNAE 607
Query: 794 IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQAT 853
K+ + T+ I L +D R P + + + + G VV+ T
Sbjct: 608 DVAKELDAGVPTVRDILEALAKPGRDPREDLPAPMTRKHIMSL-----EDVKVGTVVKGT 662
Query: 854 VRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVF 913
V V A + G+L + ++ R+ SD L GDI+ +I S++ R ++
Sbjct: 663 VHNVVDFGAFVDFGLKVNGLLHRSEFC--RRNEHPSDVLAVGDIIEAEIISVEPKRNRIG 720
Query: 914 L 914
L
Sbjct: 721 L 721
>gi|207345104|gb|EDZ72033.1| YGR116Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 209
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
Y ++ + Y+NS ++ + P + VK +AL RY+ +PL A L E+ S +
Sbjct: 1 YVEDEVAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTS--EEVRSLSIH 58
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
P +N L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +S
Sbjct: 59 PHQNLLSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQS 118
Query: 687 LVRAG-AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPES 744
L R + R+ +T + L K +F+N+ GFL + + + D LD TRIHPE
Sbjct: 119 LQRLNEPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPED 178
Query: 745 YGLAQELAKEVYNRD 759
Y LA ++A + D
Sbjct: 179 YHLATKVAADALEYD 193
>gi|421526560|ref|ZP_15973167.1| transcription accessory protein [Fusobacterium nucleatum ChDC F128]
gi|402257117|gb|EJU07592.1| transcription accessory protein [Fusobacterium nucleatum ChDC F128]
Length = 722
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 162/760 (21%), Positives = 324/760 (42%), Gaps = 134/760 (17%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y++ L E + +A +F + + ++GA + A
Sbjct: 123 PLAEKF-YTANNL-----------------EEIQNLAKDFITEEVPTVEDAIEGAMLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + ++++A + + K
Sbjct: 165 QNISEKAEYRERIREIYLKYSIIESKASKKATELDEKKVYNDYYEYA-------EKVEKM 217
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK 400
+ L + + E+E +L V ++L + ++ S + + + + + I+K
Sbjct: 218 PSHRILALNRGEKEDILTVHLRLEDSDRERIESMILNEFPKNDLVATYKE-------IIK 270
Query: 401 DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEAAP 459
D+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 271 DSLDRLIIPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRTGC 330
Query: 460 RVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMM 518
+V +G + T F ++++ + + + ++ +++ L+ +
Sbjct: 331 KVAVIDKYGFYRENTVFFLVEA-------------------MHNPKQIQDAKKKFLELVK 371
Query: 519 DHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYEN 578
++ +V +G S + + + + +++E +V + + +E+ +Y
Sbjct: 372 KYEIDIVSIGN---GTASRETETF--VANIIKEENLNVKY-------LIVNEAGASVYSA 419
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTP 634
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 420 SKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL-- 477
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 478 -------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGNFK 525
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ + +
Sbjct: 526 NRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAILGQ 576
Query: 755 VYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELI 814
I DL + L++A R+R LK++ + KE E ET+ + L+
Sbjct: 577 -----IGFDLEKYNNELDVA----RER---LKSFDYKKFAKE--NEFGLETVKDVYEALL 622
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+D R+ +++P + I D L G ++ TVR V A + +L
Sbjct: 623 KDRRDPRDDFEKPLLKSDILNI-----DNLEVGMELEGTVRNVVKFGAFIDIGLKNDALL 677
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+ SD + D S L G I+ KIK + K+R +V L
Sbjct: 678 HISEISDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 716
>gi|401410981|ref|XP_003884938.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325119357|emb|CBZ54910.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 3325
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 162/727 (22%), Positives = 296/727 (40%), Gaps = 155/727 (21%)
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
+Q+S +D ERLL+F DH V+G + L + E + +++ + + E+
Sbjct: 2275 EQRSAYDDFERLLRFFRDHFVDAAVVGVRDRFALLLYLILKERLVPKLKKKEQPLFLELA 2334
Query: 562 ELSIVYGDESLPRLYENSRISSDQLP-GQKGNVKR----AVALGRYLQNPLAMVATLCGP 616
L + P ++ SD++P + V++ ++L R LQ+PLA +A L
Sbjct: 2335 SLEV-------PTIW----AGSDKVPQALRQKVEKEGLMCLSLARTLQDPLAEIAGLWSE 2383
Query: 617 GRE--ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW-------QFA 667
GR+ +L KL PL+ + PD +E+V++ +VG+++ A+ +
Sbjct: 2384 GRQNYLLQLKLHPLQKLVPPDRLQSALERVLLATVGKVGVELKRALRGSTAALGGNPTAS 2443
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAH------------------------ 703
LQF+ GLGPRKAA L + + + R T +
Sbjct: 2444 LLQFVPGLGPRKAARLL-GMFKTSTLLMRSQLCTPNDGSTSDSDGGRGDIDDFYPSQSQS 2502
Query: 704 --------GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP-ESYGLAQELAKE 754
GLG+KV++N V FLR++ S + +D LDDTRIHP E ++ ++
Sbjct: 2503 EKRHAQPVGLGRKVYMNCVSFLRLK---NKTSDPESVDALDDTRIHPLEGRSFVAKICRD 2559
Query: 755 VY--NRDIEGDLNDDED--------------ALEMAIEHVRDRPDLLKTYLLD--RHIKE 796
D + DDE+ E AI V +P LL L+ +
Sbjct: 2560 AVAEKEDAHPNGEDDEEHGGESGARRRDDDVDDEDAIVEVFRKPALLDDMDLEAFSQMLA 2619
Query: 797 KKRENKRETLYL--IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV 854
+ ++ R YL I EL H ++D R ++ S+ E F+ GE + G V V
Sbjct: 2620 ETKDQARCLPYLEFITTELRHPYRDPRLPFESASEMEVFFWSIGEDAEEFRPGSSVSCQV 2679
Query: 855 RRVQGQRAICVLE-SGL-------------------------AGMLMKEDYSDDWRDSEL 888
V+ + L+ SG+ AG L + + +D L
Sbjct: 2680 VFVKNTSLVVRLQPSGIRVQLSDLRELRSLLALRTPQLKRDTAGQLERRPHQED-----L 2734
Query: 889 SDKLHEGDILTCKIK----SIQKNR-----YQVFLVCRESEMRNNRYQH------CQNLD 933
S L G++L ++ I+ R Y++ +V ++ Q+ +
Sbjct: 2735 SPLL--GEVLHGRVAFLHYGIELERSGFPTYRIEVVATGDVVKAMVAQNLVSDVSLNTIH 2792
Query: 934 PYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLS-AKEP-GES 991
+ S + Q + +K+ + +++ + HP ++ VT + ++LL A P GE+
Sbjct: 2793 TFLSPAASELEELQLEQQKKHQRLRRNIR-----HPNYKPVTPLKGLQLLQHAGVPVGEA 2847
Query: 992 IIRPSSRGPSY-------------LTLTLKVYDGVYAHKDIIEG----GKDHKDIKSLVG 1034
+ RP S L+L ++ + + + ++ E + + L G
Sbjct: 2848 LFRPGSSVEGLTLMVKTCAEPFRCLSLPVEERNPLLSAENTPEALSAMAAALQQQEQLGG 2907
Query: 1035 IGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEV-DELLRIEKAEFP 1093
+G L + + F+ L+ ++ ++ DPL +L+ + + K+ + E LR E + P
Sbjct: 2908 VGSELILQGEKFDSLNAIIAQFCDPLRVNLEEVYRHPKYLPIPDLSIAAEKLRQEASSRP 2967
Query: 1094 TRIVYGF 1100
I +
Sbjct: 2968 GSICWAI 2974
>gi|19703417|ref|NP_602979.1| transcription accessory protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19713489|gb|AAL94278.1| Transcription accessory protein (S1 RNA binding domain)
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 723
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 167/755 (22%), Positives = 318/755 (42%), Gaps = 124/755 (16%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 81 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 123
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y++ L E + +A +F + + ++GA + A
Sbjct: 124 PLAEKF-YTANNL-----------------EEIQSLAKDFITEEVRTIEDAIEGAMLIIA 165
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQW 345
IS + R+ +R I++ +++ + + + +D + EK + K +
Sbjct: 166 QNISEKAEYRERIREIYLKYSIIESKASKKA-AELDEKKVYTDYYEYVEK-VEKMPSHRI 223
Query: 346 LLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN 405
L + + E+E +L V ++L + ++ + + + ++ + + I+KD+LD
Sbjct: 224 LALNRGEKEDILTVHLRLEDSDRERIENMILREFPKNDLASTYKE-------IIKDSLDR 276
Query: 406 FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEAAPRVLAC 464
++PS+ +E R+ ++ RA+ + + L N + P + K+ + P +V
Sbjct: 277 LIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNILALDPGYRTGCKVAVI 336
Query: 465 -CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
+G + T F ++++ N R Q + E+ LK + +
Sbjct: 337 DKYGFYRENTVFFLVEAM----------------HNPRQIQDAR---EKFLKLVKKYDID 377
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
+V +G S + + + + ++ E +V + + +E+ +Y S+I++
Sbjct: 378 IVSIGN---GTASRETETF--VANIIREEKLNVKY-------LIVNEAGASVYSASKIAA 425
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYG 639
++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 426 EEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL------- 478
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
+ V+ V N VG +IN A W A L ISG+ A ++ G RK
Sbjct: 479 --DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVNYRKENGNFKNRKQI 531
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD 759
+ G+G K + GFL V G+ ++LD+T IHPESYG+A+ + +
Sbjct: 532 LKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAILGK----- 577
Query: 760 IEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQD 819
I DL + L++A R+R LK++ + KE E ET+ + L+ +D
Sbjct: 578 IGFDLEKYNNELDVA----RER---LKSFDYKKFAKE--NEFGLETVKDVYEALLKDRRD 628
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
R+ +++P + I D L G ++ TVR V A + +L +
Sbjct: 629 PRDDFEKPLLKSDILNI-----DNLEVGMELEGTVRNVVKFGAFIDIGLKNDALLHISEI 683
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
SD + D S L G I+ KIK + K+R +V L
Sbjct: 684 SDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 717
>gi|296328741|ref|ZP_06871255.1| S1 RNA binding domain protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154076|gb|EFG94880.1| S1 RNA binding domain protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 722
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 167/755 (22%), Positives = 318/755 (42%), Gaps = 124/755 (16%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y++ L E + +A +F + + ++GA + A
Sbjct: 123 PLAEKF-YTANNL-----------------EEIQSLAKDFITEEVPTIEDAIEGAMLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQW 345
IS + R+ +R I++ +++ + + + +D + EK + K +
Sbjct: 165 QNISEKAEYRERIREIYLKYSIIESKASKKA-AELDEKKVYTDYYEYVEK-VEKMPSHRI 222
Query: 346 LLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN 405
L + + E+E +L V ++L + ++ + + + ++ + + I+KD+LD
Sbjct: 223 LALNRGEKEDILTVHLRLEDSDRERIENMILREFPKNDLASTYKE-------IIKDSLDR 275
Query: 406 FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEAAPRVLAC 464
++PS+ +E R+ ++ RA+ + + L N + P + K+ + P +V
Sbjct: 276 LIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNILALDPGYRTGCKVAVI 335
Query: 465 -CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
+G + T F ++++ N R Q + E+ LK + +
Sbjct: 336 DKYGFYRENTVFFLVEAM----------------HNPRQIQDAR---EKFLKLVKKYDID 376
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
+V +G S + + + + ++ E +V + + +E+ +Y S+I++
Sbjct: 377 IVSIGN---GTASRETETF--VANIIREEKLNVKY-------LIVNEAGASVYSASKIAA 424
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYG 639
++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 425 EEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL------- 477
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
+ V+ V N VG +IN A W A L ISG+ A ++ G RK
Sbjct: 478 --DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVNYRKENGNFKNRKQI 530
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD 759
+ G+G K + GFL V G+ ++LD+T IHPESYG+A+ + +
Sbjct: 531 LKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAILGK----- 576
Query: 760 IEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQD 819
I DL + L++A R+R LK++ + KE E ET+ + L+ +D
Sbjct: 577 IGFDLEKYNNELDVA----RER---LKSFDYKKFAKE--NEFGLETVKDVYEALLKDRRD 627
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
R+ +++P + I D L G ++ TVR V A + +L +
Sbjct: 628 PRDDFEKPLLKSDILNI-----DNLEVGMELEGTVRNVVKFGAFIDIGLKNDALLHISEI 682
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
SD + D S L G I+ KIK + K+R +V L
Sbjct: 683 SDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 716
>gi|284049365|ref|YP_003399704.1| Tex-like protein [Acidaminococcus fermentans DSM 20731]
gi|283953586|gb|ADB48389.1| Tex-like protein [Acidaminococcus fermentans DSM 20731]
Length = 724
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 180/872 (20%), Positives = 356/872 (40%), Gaps = 167/872 (19%)
Query: 49 SPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDF 108
+P+ +LS+ + + ++LL +PFIA YRKE SLL
Sbjct: 7 APRIARELSVQPWQVEKTVELLDGGN-TVPFIARYRKEVTGSLL---------------- 49
Query: 109 ERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF 168
D++ +++R L++ K R EE +I ++ +L +
Sbjct: 50 ------------------DEQIRTIEERLGTLRNLVK-RQEEILAKIDEQGKLTPD---- 86
Query: 169 DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVA 228
+ K++E A+ E++D L + + KR T+ + GL +A
Sbjct: 87 --LRKAIENAQKLTELEDYYLPY-----------------KQKRRTRAQQAREKGLEPLA 127
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEI 288
+ F +Q G L+ + + + ETPE+ L GAR + A
Sbjct: 128 TAFLLQRDQKGDALTAARAYVDPDKGVETPED---------------ALAGARDIVAELA 172
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLI 348
+ +P +R+ +R ++ + T D + A +F +A + +P+R + L I
Sbjct: 173 AEDPTLRQTLREQLWNHGFLQTELVEDAEEA-QTFLMYADYR----EPVRTLPSHRVLAI 227
Query: 349 QKAEEEKLLQVTIKLPED-SLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
+ E++ L+V + E +L K+ V + ++ DQ + L D+ L
Sbjct: 228 NRGEKKGCLKVHLVWDEQQALRKM---------EWRVLRRPCIYRDQLKEALADSWKRLL 278
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
P++ +E RS ++ +A+ + +G L + P A V+
Sbjct: 279 FPALEREIRSRLTEQAEDQAIKVFGANLGQLLLQAPL------------AGHTVMGL--D 324
Query: 468 PG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
PG + ++D +G+V+D G + Q + + KK + LL + H HV +
Sbjct: 325 PGYRTGCKVAVVDPTGQVLD---HGVI----QVTQSEGQKKKAEALLLSMIQKH--HVTL 375
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQL 586
L N + + + + ++++EH ++ ++ + +E+ +Y S+++ ++L
Sbjct: 376 LSIGNGTASY---ETEQFAARLIQEH------QLKDVHYLITNEAGASVYSASKLAQEEL 426
Query: 587 PGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMV 646
P ++ AV++ R +Q+PLA + + + ++ + L G ++ V+
Sbjct: 427 PEYDVTIRGAVSMARRVQDPLAELVKIDPQAIGVGQYQHDVDQKALA-----GTLDGVVE 481
Query: 647 DVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLG 706
V N VG+D+N A A L+ ++G+ A ++ G R+ + LG
Sbjct: 482 RVVNHVGVDLNTA-----SPALLRHVAGITAATAGNIVAWRNANGRFTGRRQLLKVPRLG 536
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND 766
F GFLR+ G++ LDDT +HPESY LAQ++ ++
Sbjct: 537 PAAFTQCAGFLRI-HGGKSP--------LDDTPVHPESYALAQQILEK------------ 575
Query: 767 DEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRE----TLYLIRRELIHGFQDWRN 822
L A+E ++D+ L + + + E + + E T++ I L+ +D R+
Sbjct: 576 ----LGFALEDLQDKEKLARLAARRKQVDEARMARELEAGEPTVHDILDALVAPGRDPRS 631
Query: 823 QYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDD 882
P + +S + G +++ T+R V A + AG++ S
Sbjct: 632 DLPAPLTRQNIVKLSD-----IKVGTILRGTIRNVTDFGAFVDIGIKTAGLIHISHMSQK 686
Query: 883 WRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
R D + G+ + K+ S+ + R ++ L
Sbjct: 687 -RIKHPLDVVSAGETVQVKVISVDEGRGRIGL 717
>gi|440783126|ref|ZP_20960937.1| Transcription accessory protein TEX, RNA-binding protein containing
S1 domain [Clostridium pasteurianum DSM 525]
gi|440219701|gb|ELP58912.1| Transcription accessory protein TEX, RNA-binding protein containing
S1 domain [Clostridium pasteurianum DSM 525]
Length = 718
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 151/654 (23%), Positives = 279/654 (42%), Gaps = 91/654 (13%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
N+ Q L GA + + IS E RK++R++ ++ T + + + + ++ +
Sbjct: 151 VNNIQEALAGAEDIISEIISDEAEYRKWIRNLVKKEGIIETSGSSEEPTPYEMYYDY--- 207
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ 389
++ + K + L I + E+EK+L V I ED + K YL+D K +
Sbjct: 208 ----KEAVDKIPPHRILAINRGEKEKVLSVKITCDEDKIIK--------YLNDRCLKGNE 255
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN 449
+ E +KD+L + PS+ +E RS + + + + L + + P + K
Sbjct: 256 KTDKYIENSVKDSLKRLIYPSIEREIRSELFEIGEDGAIEIFKSNLKSLLMQSPIKGK-- 313
Query: 450 DITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
+ PG + +LD +G+++D T + + +N
Sbjct: 314 ------------AVLGYDPGFRTGCKIAVLDETGKLLD---TATIY--------ATAPQN 350
Query: 509 DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG 568
D E +K ++ + +G ++L + + EI+ +++E + MD L V
Sbjct: 351 DVEGSIK-ILKQLVYKYNVGMISLGNGTASRESEEIVASLIKEVKDE--KNMD-LYYVIV 406
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPL 628
E+ +Y S ++S + P +++ A+++GR LQ+PLA + + P S +
Sbjct: 407 SEAGASVYSASELASKEYPDINVSLRGAISIGRRLQDPLAELVKI-DPK----SIGVGQY 461
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
++ +TP + + V+ D N VG+D+N+A A L ++SG+ A ++
Sbjct: 462 QHDVTPKKMDESLTGVVEDCVNSVGVDLNIATP-----ALLSYVSGVNSNIAKNIVNYRE 516
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
G +RK+ + LG K + GFLRV S +A LD+T +HPESY A
Sbjct: 517 EKGKFKSRKELLKVKRLGPKAYEQCAGFLRVMESEEA---------LDNTAVHPESYKAA 567
Query: 749 QELAK--EVYNRDI-EGDLNDDEDALE-MAIEHVRDRPDLLKTYLLDRHIKEKKRENKRE 804
+ L + +DI EG+L D ++ ++ + IE + + K E
Sbjct: 568 KGLLDILDYTEKDIKEGNLLDIDNKVKFLGIEKLAE-----------------KLEIGVP 610
Query: 805 TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAIC 864
TL I +E+ +D R + +P IS L G V+ TVR V A
Sbjct: 611 TLSDIVKEIKKPGRDPREEMPKPVLKTGIIDIS-----QLKPGMVLTGTVRNVADFGAFV 665
Query: 865 VLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
+ G++ SD + L D + GDI+ + I + R ++ L ++
Sbjct: 666 DIGVHQDGLVHISQLSDKFVKHPL-DVVKVGDIIEVTVLEIDEKRNRISLTMKK 718
>gi|392409024|ref|YP_006445631.1| transcriptional accessory protein [Desulfomonile tiedjei DSM 6799]
gi|390622160|gb|AFM23367.1| transcriptional accessory protein [Desulfomonile tiedjei DSM 6799]
Length = 709
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 168/685 (24%), Positives = 272/685 (39%), Gaps = 156/685 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D +T T++ L++ +L Q+R
Sbjct: 34 VPFIARYRKEATGSL---------------DEVQTATIRDR--------LEQLAVLEQRR 70
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ ++S E R + ++L ++ K A++ E++DV L +
Sbjct: 71 EAIMKSL--------------EERGLVTEELKQTVMK----ADSLAELEDVYLPY----- 107
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR TK S + GL E+A K YS E L + + D +
Sbjct: 108 ------------RPKRRTKASIARERGLEELAIKI-YSQESFHLAGEVLRFVDSEKG--- 151
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
SS+A L GAR + A I+ + VR +R +F + +V +
Sbjct: 152 -------------VESSEAALAGARDIIAETINEDSGVRSAIRKLFFEKGIVRSKVISGK 198
Query: 317 DSAIDSFHQ-FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+ F F + + P + L + + E+E +L + I+ ED +
Sbjct: 199 EDEGTRFQDYFDSSERISSAP-----GHRLLAMFRGEKEGVLSLQIRPSEDEALGVLRRL 253
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
V K+ Q EL L D L PSM E R RA + + K L
Sbjct: 254 --------VLKARNEAAQQVELALVDGYKRLLAPSMETETRQGAKKRADEEAIRVFAKNL 305
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ P RK RVLA PG + V LDS G++
Sbjct: 306 RELLLSAPLGRK------------RVLA--LDPGFRTGAKLVCLDSQGKL---------- 341
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEI----IFKMVE 550
L + QS+K M Q +V C + + + + E
Sbjct: 342 LHHDTIYPTQSEK----------MAEQAATIV----KELCRRFEIEAIAVGNGTAGRETE 387
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R +G +++V +ES +Y S+ + ++ P Q V+ A+++GR L +PLA +
Sbjct: 388 TFVRSLGLP-KSITVVMVNESGASIYSASKAAREEFPDQDVTVRGAISIGRRLLDPLAEL 446
Query: 611 ATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
+ I ++ + D K + + V++ N+VG+++N A +E L
Sbjct: 447 VKIDPKSIGIGQYQ----HDVDQTDLKRSL-DDVVISCVNRVGVEVNTA-SKEL----LS 496
Query: 671 FISGLGPRKAAS--LQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
++SGLGP A + LQRS +G TRK+ + LG K F A GFLR+
Sbjct: 497 YVSGLGPTLAKNIVLQRST--SGPFRTRKELLNVPRLGPKAFEQAAGFLRI--------- 545
Query: 729 SQFIDLLDDTRIHPESYGLAQELAK 753
S + LD + +HPESY + ++ A+
Sbjct: 546 SDGENPLDASAVHPESYPIVEQFAR 570
>gi|154505455|ref|ZP_02042193.1| hypothetical protein RUMGNA_02984 [Ruminococcus gnavus ATCC 29149]
gi|336433130|ref|ZP_08612957.1| hypothetical protein HMPREF0991_02076 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153794248|gb|EDN76668.1| Tex-like protein N-terminal domain protein [Ruminococcus gnavus
ATCC 29149]
gi|336017296|gb|EGN47061.1| hypothetical protein HMPREF0991_02076 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 717
Score = 103 bits (256), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 158/684 (23%), Positives = 278/684 (40%), Gaps = 154/684 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL ND+ R K H+ L + +L+ +K+
Sbjct: 31 IPFISRYRKEATGSL-------------NDEQLR----KLHERLVYLRNLE------EKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L S EE ++ +E + S+ LEA
Sbjct: 68 EQVLSSI------EEQGKLTEELK-----------SQILEA------------------- 91
Query: 197 PGEVGVDEGQYK--RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
G + V E Y+ RPKR T+ + + GL E L + L+K+ L +
Sbjct: 92 -GTLVVVEDLYRPYRPKRRTRATIAKEKGL-----------EPLAAVIILQKLKMPLLEE 139
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPT 313
E CA + + GA+ + A IS E R ++R I M ++ST
Sbjct: 140 AEKYVSEEKGVVCA-----EDAIAGAKDIIAESISDEADYRSWIRKITMKKGKLISTAKD 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
P+ +S + +++F E+PL K + L + + E+EK+L V I+ PE+ +
Sbjct: 195 PEAESVYEMYYEF-------EEPLSKLAGHRILALNRGEKEKILTVKIEAPEEEIL---- 243
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLM 429
YL + L +Q LK+A+++ + P++ +E RS ++ +A++ +
Sbjct: 244 ----GYLEKQIFHGKNLDTEQA---LKEAVEDSYKRLIGPAIEREIRSDLTEKAENGAIE 296
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVL 488
+GK L + P + + W P + ++D +G+V+
Sbjct: 297 VFGKNLHQLLMQPPITGQ--------------VVLGWDPAFRTGCKLAVVDPTGKVL--- 339
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
G + K ++ L K + + ++ LG S S + I ++
Sbjct: 340 --GTTVIYPTAPTTPAKIKASKDLLKKIIPKYHITLISLGNGTASRES-----EQFIVEL 392
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
++E P V + V +E+ +Y S+++S++ P + A ++ R LQ+PLA
Sbjct: 393 LKEIPEKVQY-------VIVNEAGASVYSASKLASEEFPKFDVGQRSAASIARRLQDPLA 445
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ + E S + ++ + + + V+ D N+VG+D+N A AP
Sbjct: 446 ELVKI-----EPQSIGVGQYQHDMNQKKLGESLSGVVEDCVNKVGVDLNTA------SAP 494
Query: 669 -LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L +ISG+ A ++ G RKD + LG K F GF+R++
Sbjct: 495 LLSYISGISGAIAKNIVAYREENGKFQDRKDLLKVAKLGPKAFEQCAGFMRIQGGKNP-- 552
Query: 728 SSQFIDLLDDTRIHPESYGLAQEL 751
LD T +HPESYG ++L
Sbjct: 553 -------LDATGVHPESYGATEKL 569
>gi|225027513|ref|ZP_03716705.1| hypothetical protein EUBHAL_01769 [Eubacterium hallii DSM 3353]
gi|224955152|gb|EEG36361.1| Tex-like protein N-terminal domain protein [Eubacterium hallii DSM
3353]
Length = 716
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 201/859 (23%), Positives = 352/859 (40%), Gaps = 196/859 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE +L ND+ R H+ L + +L++K
Sbjct: 31 IPFIARYRKEMTGAL-------------NDETLRN----LHERLLYLRNLEEKK------ 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
E+ I D+ ++ + + K + +AET VDD L+ P
Sbjct: 68 ------------EQVINAITDQGKMT------EDLKKKILSAETLVAVDD------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPK+ T+ + + GL E L L L+K +E
Sbjct: 104 -----------YRPKKQTRATKAKEKGL-----------EPLANILLLQKTTKSME---- 137
Query: 257 TPEEMAS--NFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN-AVVSTCPT 313
EE A+ N + + N+ +A+ GA+ + A I+ RK +R+ M ++V
Sbjct: 138 --EEAAAFVNAEKGVANAKEAI-AGAKDIIAEMIADMADYRKSIRNCTMKQGSLVVKAKD 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE----DSLN 369
+S + ++ F RE PL K + L I + E+EK L V ++ P+ ++LN
Sbjct: 195 EKAESVYEMYYDF------RE-PLSKVTGYRVLAINRGEKEKFLTVKVEAPDVQIVNALN 247
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
K + D ++ A + E IL DA + + PS+ ++ RS ++ +A+ +
Sbjct: 248 KTM-------VKDNLNTKALM----EEAIL-DAYNRLIAPSIERDIRSEITEKAQEGAIT 295
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVL 488
+GK L + P + + W P + ++D +G+V+D
Sbjct: 296 VFGKNLTQLLMQPPMEGRT--------------VLGWDPAFRTGCKLAVVDPTGKVLD-- 339
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN-LSCTSLKDDIYEIIFK 547
T + + + +Q+KK + + K+ +V V+ N +C + ++I +
Sbjct: 340 -TVVVYPTAPQCKVEQAKKTVHDMIKKY------NVSVISVGNGTACRESE----QVITE 388
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
++ E P V + V +E+ +Y S++++++ P + A ++ R LQ+PL
Sbjct: 389 LIREIPEQVAY-------VIVNEAGASVYSASKLATEEFPEFDVGQRSAASIARRLQDPL 441
Query: 608 AMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
A + + G G+ LE L G++E D N+VG+D+N A
Sbjct: 442 AELVKIEPKAIGVGQYQHDMNQKRLEEALN-----GVVE----DCVNKVGVDLNTA---- 488
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
L +I+G+ A ++ G TRK+ + LG K F+ GFLR+
Sbjct: 489 -SVPLLSYIAGISKAVAKNIVAYREENGRFHTRKELLKVPKLGPKAFLQCAGFLRIPGGE 547
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPD 783
+ LD+T +HPESY A +L LND L E +R
Sbjct: 548 EP---------LDNTSVHPESYEAATKL------------LND----LGYTSESIRGG-- 580
Query: 784 LLKTYLLDRHIKEKK--REN---KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISG 838
L+ IK++K EN TL+ I EL +D R++ +P +
Sbjct: 581 --GLSSLNSQIKDEKGLAENLGIGEMTLHDIIEELEKPGRDPRSEMPKPVLRTDVL---- 634
Query: 839 ETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDIL 898
E +D L EG V++ TVR V A + G++ +D + L + + GDI+
Sbjct: 635 EMKD-LKEGMVLKGTVRNVIDFGAFVDIGVHQDGLVHISQMTDRYIKHPL-EVVSVGDII 692
Query: 899 TCKIKSIQKNRYQVFLVCR 917
++ S+ N+ ++ L +
Sbjct: 693 DVQVMSVDLNKKRIQLTMK 711
>gi|363894603|ref|ZP_09321682.1| hypothetical protein HMPREF9629_01993 [Eubacteriaceae bacterium
ACC19a]
gi|361961898|gb|EHL15060.1| hypothetical protein HMPREF9629_01993 [Eubacteriaceae bacterium
ACC19a]
Length = 714
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 168/765 (21%), Positives = 314/765 (41%), Gaps = 144/765 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
++ ++I SLE A T +EV+D+ + P +K+ KR T+ S + G
Sbjct: 79 KMTENIRLSLENAMTLQEVEDI-------YAP---------FKQKKR-TRASVAKEKG-- 119
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF--KCAMFNSSQAVLQGARHM 283
LE + L D E E+ A F + NS++ + GA +
Sbjct: 120 ------------------LEPLSQVLLDGNEKIEDKADEFINEELEVNSTKEAITGAMDI 161
Query: 284 AAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGD-----SAIDSFHQFAGVKWLREKPLR 338
A I+ + ++K +R + D AV+ T + S + +F+ +
Sbjct: 162 VAEIIADDFELKKQLRKLLFDTAVIMTSAKKGAEEKEDFSVYKMYMEFSEIS-------S 214
Query: 339 KFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
K + L I + E++ +L+V I + K ++ Y+ + K + D
Sbjct: 215 KMPSYRILAINRGEKDDILKVKI---DYDFEKFLETAQKSYIKSEIHK--DIMTDT---- 265
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
+ D+L +LPS+ +E RS M+ RA+ + +G+ L + P + K
Sbjct: 266 ITDSLKRLMLPSLERELRSEMTSRAEEKAIAVFGENLSALLMQSPLKNK----------- 314
Query: 459 PRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFM 517
+ W P + ++D +G+V+D T QN ++ SK+ + +
Sbjct: 315 ---VVLGWDPAYRTGCKIAVVDETGKVLDT--TTVYPTMPQNKVEETSKE-----ITSLI 364
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
++ +++ +G S S E+ D+ MD + E+ +Y
Sbjct: 365 NKYKVNIISIGNGTASRES-------------EQIVADIVKGMDNVYYTIVSEAGASVYS 411
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
S++ ++L +++ AV++ R +Q+P++ + + E S + ++ +
Sbjct: 412 ASKLGEEELKDMNVSLRGAVSIARRIQDPMSELVKI-----EPKSIGVGQYQHDVNQKRL 466
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRK 697
++ V+ D N+VG+D+N A ++ L++ISG+ P A ++ + +G R
Sbjct: 467 SEVLSNVVEDNVNKVGVDLNTA-----SYSILEYISGITPSIAKNIVKYRDTSGKFKNRD 521
Query: 698 DFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYN 757
+ + LG+ F GFLRV+ S +LLD+T IHPESY +L E+
Sbjct: 522 ELLKVSRLGQSCFEQCAGFLRVKDSQ---------NLLDNTGIHPESYEKTYKLL-EILG 571
Query: 758 RDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRE----TLYLIRREL 813
DI D I ++ D +K+ +K E TL I +EL
Sbjct: 572 VDISND---------NFISKFSEKID---------KFSQKELADKLEIGMPTLIDIIKEL 613
Query: 814 IHGFQDWRNQYK-EPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
D R++ P + + ED L+EG +++ TVR V A + G
Sbjct: 614 KKPGLDIRDEKNISPVLRSDVLKL----ED-LSEGMILKGTVRNVLEFGAFVDIGVKNDG 668
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
++ SD + + + D + GD++ K+ I +R +V L R
Sbjct: 669 LVHISQLSDKYIKNPM-DVVSIGDVVNVKVIGIDYDRKKVSLSMR 712
>gi|149197730|ref|ZP_01874780.1| RNA binding domain protein, S1 [Lentisphaera araneosa HTCC2155]
gi|149139300|gb|EDM27703.1| RNA binding domain protein, S1 [Lentisphaera araneosa HTCC2155]
Length = 705
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 167/706 (23%), Positives = 279/706 (39%), Gaps = 154/706 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L+I I + ++LL +PFIA YRKE L +EV
Sbjct: 11 ELAIQSSQISKTIELLD-SGATLPFIARYRKEATGGL------DEVQ------------- 50
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
+ AI DL + L KRK A+ K+R L +++
Sbjct: 51 -----IGAIRDLKSNFEELDKRKQAIFKSLKER-----------------DLLTENLKAK 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
LE A+ ++D L + RPK+ T+ S + GL +
Sbjct: 89 LEQAKNLNALEDYYLPY-----------------RPKKKTRASQAREKGLEPLT------ 125
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
Q+ +++ GD ++ K + N+ L GAR + A ++S +
Sbjct: 126 ------QVLMQQSGDRIDFHKFIN-------RAKGVNNRDEALAGARDILAEQMSEDSKT 172
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
R +R+ F +A +S+ + I+ ++ L EK L + + L I + E E
Sbjct: 173 RSQLRNAFETHARLSSKVIK---TKIEDAQKYRDYFDLEEK-LSRVPGHRLLAILRGERE 228
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
L+V ++ ++ K+ + K L + Q +L +DA LLPS+ KE
Sbjct: 229 GFLRVKMRPDQERTQKI--------VERNFVKGRGLASSQVQLAAEDAYKRLLLPSLEKE 280
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
+ +A + + L + P RK +VLA + PG +
Sbjct: 281 VQKKAQEKADIESIRVFVANLRELLLAAPLGRK------------KVLA--FDPGFRTGA 326
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
V L S+GE L C N ++++ + D+ R L + + + AV
Sbjct: 327 KVVCLGSAGE----LLYNCNLFPVGNSKEKEQQAADETRRLV-----KKYAIEALAVGNG 377
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
+ +++ + D+G L ++ DES +Y S + ++ P V
Sbjct: 378 TAGRETELFL--------NELDLG-----LPVISVDESGASIYSASESARNEFPNHDLTV 424
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ AV++GR LQ+PLA + L G G+ L K + +QV+ V
Sbjct: 425 RGAVSIGRRLQDPLAELVKLDPKTIGVGQYQHDVDQSAL--------KKALDDQVLSSV- 475
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+D+N A L ++SG+GP+ A ++ G R + LG KV
Sbjct: 476 NAVGVDLNTA-----SVELLSYVSGIGPKLAEAILNYRSSEGLFKNRNELKKVPRLGDKV 530
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
F A GFLRV Q +LD + +HPESYGL + +AK++
Sbjct: 531 FEQAAGFLRVFDGDQ---------VLDSSAVHPESYGLVKRMAKDL 567
>gi|221060570|ref|XP_002260930.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
gi|193811004|emb|CAQ42902.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
Length = 2617
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 152/321 (47%), Gaps = 32/321 (9%)
Query: 572 LPRLYENS-RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP-GREILSWKLCPLE 629
+P + NS + S+D ++L R++QNPL +V +L + +L+ L L+
Sbjct: 1851 IPSIVTNSLKYSADLTSKYSREALLCLSLCRFVQNPLCVVISLFEEENKNMLNICLHDLQ 1910
Query: 630 NFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF-APLQFISGLGPRKAASLQRSLV 688
++ + + +++++DV N+ G DIN ++ L +++GLG RK L + L+
Sbjct: 1911 KYICSYKLESLFQRIILDVVNKTGCDINFLKKKKKHLGVMLSYVAGLGLRKREELIK-LL 1969
Query: 689 RAGAIFTRKDFVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP-E 743
+ TR+D +T +GK ++ N F+R+ + ++++ LD+TRIHP
Sbjct: 1970 HNRNLSTREDLLTLSSNKNLIGKCIYRNCSSFIRI-----IGHADEYVEALDNTRIHPLN 2024
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---E 800
Y + Q+L K V + L D + I K + + IKE R +
Sbjct: 2025 CYDIIQDLFKNVIDTKKNNFLKSTYDIVNYIINK--------KKLIRNMEIKEYSRRFYD 2076
Query: 801 NKRETLY----LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRR 856
K+ +Y I+ EL+H ++D+R Y+ ++E FY+I E ++ LA G V +
Sbjct: 2077 EKKIYIYPYLKFIQTELMHPYKDYRYNYERKKEEELFYLIINEKKENLAIGSEVVCKMDY 2136
Query: 857 VQGQR---AICVLESGLAGML 874
+ I +L + G++
Sbjct: 2137 LNKNSNYIKITILPYNIKGII 2157
>gi|300853471|ref|YP_003778455.1| transcriptional accessory protein [Clostridium ljungdahlii DSM
13528]
gi|300433586|gb|ADK13353.1| transcriptional accessory protein [Clostridium ljungdahlii DSM
13528]
Length = 721
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 146/651 (22%), Positives = 273/651 (41%), Gaps = 85/651 (13%)
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW 331
S + L GA + + IS E RK++R +N ++ T + + ++ +
Sbjct: 153 SVEDALAGAVDIISEVISDEAKYRKWIRKFVWENGIIETKGESKEPTPYEMYYDY----- 207
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLW 391
RE ++ + L I + E+EK+L V I ++ E YL + K +
Sbjct: 208 -RE-AVKSIPPHRILAINRGEKEKVLSVKISCDMKNI--------EIYLKNQSLKGNNIT 257
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
+ E ++D+L + PS+ +E RS ++ + + + L + P + K+
Sbjct: 258 DTYIEKSVEDSLKRLIYPSIEREIRSQLTDMGEEGAIKIFKANLKALLMQSPIKGKN--- 314
Query: 452 TPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQ 510
+ PG + +LD +G+++D Q +
Sbjct: 315 -----------VLGYDPGFRNGCKIAVLDDTGKLLDTAIVYATA-------PQNDVEGSI 356
Query: 511 ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDE 570
++L + + + +VV LG S S E+I K+++E + G + L V E
Sbjct: 357 KKLKELVYKYDVNVVSLGNGTASRES-----EELIGKLIKEVKEEKGKD---LYYVIVSE 408
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLEN 630
+ +Y S +++ + P +++ A+++GR LQ+PLA + + + S + ++
Sbjct: 409 AGASIYSASELAAKEYPDINVSLRGAISIGRRLQDPLAELVKI-----DPKSIGVGQYQH 463
Query: 631 FLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA 690
+ P + ++ ++ D N VG+D+N+A + L +ISG+ A+++
Sbjct: 464 DVAPKKLDESLKGIVEDCVNSVGVDLNIATP-----SLLSYISGINTAIASNIVAYREEN 518
Query: 691 GAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQE 750
G RK+ + LG K F GFLRV SG+ LD+T +HPESY A+E
Sbjct: 519 GKFKNRKELLKVKRLGAKAFEQCAGFLRVMESGEP---------LDNTSVHPESYDAAKE 569
Query: 751 LAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLI 809
L K + YN + DL + E + + +R D + +L +K TL I
Sbjct: 570 LLKIIGYNME---DLKNGE------LSGIDNRVDKIGIDVLS-----EKLNVGEPTLKDI 615
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
+E+ +D R + +P I + L G V+ TVR V A +
Sbjct: 616 IKEIKKPGRDPREELPKPILKTGIIDI-----NQLKPGMVLTGTVRNVADFGAFVDIGVH 670
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
G++ SD + L D + GDI+ + + + R ++ L + S+
Sbjct: 671 QDGLVHISQLSDKFVKHPL-DVVQVGDIVQVTVLEVDEKRKRISLSMKSSD 720
>gi|451343415|ref|ZP_21912487.1| competence protein ComEA helix-hairpin-helix repeat region
[Eggerthia catenaformis OT 569 = DSM 20559]
gi|449337778|gb|EMD16934.1| competence protein ComEA helix-hairpin-helix repeat region
[Eggerthia catenaformis OT 569 = DSM 20559]
Length = 715
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 149/654 (22%), Positives = 274/654 (41%), Gaps = 102/654 (15%)
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG-VKWL 332
+ VLQGA + A +IS E RKY + + M + T + + + + ++ L
Sbjct: 154 EEVLQGASDIIAEKISDEAKYRKYTKDMIMKYGFIRTKKKKQVEDENEIYQMYYDYIERL 213
Query: 333 REKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQL-W 391
R P + L I + E+EK+L V+I++ ++ + Y+ GVS++ Q +
Sbjct: 214 RNLPAHRI-----LAINRGEKEKILSVSIEIDKEKYYQ--------YIYYGVSRNKQTAF 260
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
E +KD D +LP+ +E R+ ++ A+ L + L + + P + K
Sbjct: 261 RAFLERSVKDGFDRLILPAAEREIRNELTQSAEKASLKIFSTNLEHLLMQPPLKNK---- 316
Query: 452 TPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDV--LFTGCLTLRSQNVRDQQSKKN 508
PG + +D +G+V+D+ +F +R DQ
Sbjct: 317 ----------YVLGLDPGFRTGCKLAAVDPTGKVLDIDKVFISLPKVR----HDQ----- 357
Query: 509 DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG 568
D++ LL+ + D+ V+ +G S S + I + ++ D+ + V
Sbjct: 358 DEKTLLRMIYDYHIEVIAIGNGTASRESER-----FIASFINKYHLDIQY-------VIV 405
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPL 628
E+ +Y S ++ + P + + AV++ R LQ+PLA + + P S +
Sbjct: 406 SEAGASVYSASTLAKKEFPNYQTEERSAVSIARRLQDPLAELVKI-DPK----SISVGQY 460
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
++ + E ++ V++ NQ+G++IN A + +Q++SG A ++
Sbjct: 461 QHDMNQKELSEQLDYVVLKAVNQIGVNINTA-----SASLMQYVSGFSQSIAWNIVSYRE 515
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
G RK+ + +G K + +VGFLR+ D+LD+T IHP++Y A
Sbjct: 516 EHGPFKNRKEILNVSKVGPKTYEQSVGFLRIMNGS---------DVLDETAIHPDNYQDA 566
Query: 749 QELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYL 808
+L + ++ E +E A+++V K+K +E + YL
Sbjct: 567 DKLLNYL---NLSRAYIGTEKMIE-ALKYVN---------------KDKIKEELHFSHYL 607
Query: 809 IRRELIHGF----QDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAIC 864
I +LI+ F + R+ Y P + I D L++G +Q TVR V A
Sbjct: 608 I-NDLINAFMAPHRTPRDNYPAPVLKSDILTI-----DDLSQGMKMQGTVRNVVDFGAFV 661
Query: 865 VLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
+ G++ + L D ++ GDI+ I I K R +V L E
Sbjct: 662 DIGLHEDGLIHISKMAKHKIRHPL-DIVNVGDIIDVYIYEIDKKRKRVALSLVE 714
>gi|294784341|ref|ZP_06749632.1| S1 RNA binding domain protein [Fusobacterium sp. 3_1_27]
gi|294487913|gb|EFG35268.1| S1 RNA binding domain protein [Fusobacterium sp. 3_1_27]
Length = 721
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 169/765 (22%), Positives = 318/765 (41%), Gaps = 144/765 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 81 KLTEELRSSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 123
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF +S +LE++ + +A +F + + ++GA + A
Sbjct: 124 PLAEKFYIAS-------NLEEI-----------QNLAKDFITEEVPTVEDAIEGAMLIIA 165
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + +++++ + + K
Sbjct: 166 QNISEKAEYRERIREIYLKYSIIESKASKKAAELDEKKVYNDYYEYS-------EKVEKM 218
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD--CKEHYLSDGVSKSAQLWNDQRELI 398
+ L + + E+E +L V ++L EDS + + KE +D V + I
Sbjct: 219 PSHRILALNRGEKEDILTVHLRL-EDSDRERIENMILKEFPKNDLVVTYKE--------I 269
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEA 457
+KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 270 IKDSLDRLIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRT 329
Query: 458 APRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF 516
+V +G K T F ++++ N R Q ++ + LK
Sbjct: 330 GCKVAVIDKYGFYKENTVFFLVEA----------------MHNPRQIQDARD---KFLKL 370
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ + +V +G S + + + + ++ E DV + + +E+ +Y
Sbjct: 371 VKKYDIDIVSIGN---GTASRETETF--VANIIREEKLDVKY-------LIVNEAGASVY 418
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFL 632
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 419 SASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL 478
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 479 ---------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGN 524
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK + G+G K + GFL V G+ ++LD+T IHPESYG+A+ +
Sbjct: 525 FKNRKQILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAIL 575
Query: 753 KEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETLYLI 809
++ +N +E D D+ + L K+ EN ET+ +
Sbjct: 576 GKIGFN-----------------LEKYNDELDIAREKLKSFDYKKFAEENSFGLETVKDV 618
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 619 YEALLKDRRDPRDDFEKPLLKSDILNI-----DNLQVGMELEGTVRNVVKFGAFIDIGLK 673
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 674 NDALLHVSEISDKYIDDP-SKVLSVGQIIKIKIKDVDKDRGRVGL 717
>gi|302390897|ref|YP_003826717.1| Tex-like protein [Acetohalobium arabaticum DSM 5501]
gi|302202974|gb|ADL11652.1| Tex-like protein [Acetohalobium arabaticum DSM 5501]
Length = 718
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 160/716 (22%), Positives = 307/716 (42%), Gaps = 115/716 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
R KR T+ + GL +A F + G S++++ ++ +P+E E+
Sbjct: 108 RQKRKTRAAKAKDKGLEPLAELFLAQKLESG---SIKELAEDYLNPEEELTEI------- 157
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ VLQG R + A ++ +P VR+ R + D +++ D D +H++
Sbjct: 158 -----EDVLQGTRDIIAEYVADKPEVRQVARRMTFDKGSITSEVKEDEDDNYRDYHEY-- 210
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP-EDSLNKLFSDCKEHYLSDGVSKS 387
++ + + + Q L + + E+E+ LQV ++ P ED + K+ KE + +
Sbjct: 211 -----QEEVEEVDPYQTLALNRGEDEEALQVKVEAPDEDIIRKI----KEMIIEN----Q 257
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
A ++ ++ E ++D + P++ +E R+ ++ A+ + + L + P + K
Sbjct: 258 ATIFLEEIEEAIEDGYQRLVAPAIGREVRNKLTDEAEEHAINIFADNLKTLLLQPPVRDK 317
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSK 506
RVL PG + + ++D G ++L T + + ++K
Sbjct: 318 ------------RVLGI--DPGFRTGSKVAVVDEIG---NLLATAAIYPHPPQKKVSEAK 360
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
E+L + + ++ ++ +G +C ++ EII + E+D L V
Sbjct: 361 ----EQLEELITEYNVDLIAIGN-GTACRETEELAAEIIKE----------SELD-LHYV 404
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
+E+ +Y S ++ D+ P +++ V++ R LQ+PLA + + + +
Sbjct: 405 IVNEAGASVYSASEVAQDEFPKLDVSLRGTVSIARRLQDPLAELVKIDSKHLGVGMY--- 461
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
++ L E +E V+ V N VG+D+N A + L +++G+ A ++ +
Sbjct: 462 --QHDLNQGELDEALETVVESVVNYVGVDLNTA-----STSLLGYVAGVNKTVANNIVQW 514
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
G +R +G+G K F A GFLR+ G+ D L T IHPESY
Sbjct: 515 REENGKFSSRDQLKDVYGIGPKTFTQAAGFLRIF-DGE--------DKLAATAIHPESYS 565
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKE--KKRENKRE 804
A++L KE + + D +++D LK L + ++KE K
Sbjct: 566 AARKLLKETGFKLKDLDFKENQD---------------LKERLNNLNLKELTDKIGVGFP 610
Query: 805 TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA-- 862
TL I++ L+ +D R + +P +E + D L G ++Q +R V A
Sbjct: 611 TLLDIKKNLVKPGRDPREEMSKPVFKQEVM-----SWDDLKSGMILQGEIRNVVDFGAFV 665
Query: 863 -ICVLESGLAGML-MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVC 916
I V E GL + M +Y +D + + GD++ KI I R ++ L
Sbjct: 666 DIGVKEDGLVHISEMSSEYVEDPFEV-----VKVGDVVKIKILEIDSARKRIALTM 716
>gi|363890011|ref|ZP_09317359.1| hypothetical protein HMPREF9628_01801 [Eubacteriaceae bacterium
CM5]
gi|361966109|gb|EHL19050.1| hypothetical protein HMPREF9628_01801 [Eubacteriaceae bacterium
CM5]
Length = 714
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 131/606 (21%), Positives = 255/606 (42%), Gaps = 115/606 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
++ ++I SLE A T +EV+D+ + P +K+ KR T+ S + G
Sbjct: 79 KMTENIRLSLENAMTLQEVEDI-------YAP---------FKQKKR-TRASVAKEKG-- 119
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF--KCAMFNSSQAVLQGARHM 283
LE + L D E E+ A F + NS++ + GA +
Sbjct: 120 ------------------LEPLSQILLDGNEKIEDKADEFINEELEVNSTKEAITGAMDI 161
Query: 284 AAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGD-----SAIDSFHQFAGVKWLREKPLR 338
A I+ + ++K +R + D AV+ T + S + +F+ +
Sbjct: 162 VAEIIADDFELKKQLRKLLFDTAVIMTSAKKGAEEKEDFSVYKMYMEFSEIS-------S 214
Query: 339 KFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
K + L I + E++ +L+V I + K ++ Y+ + K + D
Sbjct: 215 KMPSYRILAINRGEKDDILKVKI---DYDFEKFLETAQKSYIKSEIHK--DIMTDT---- 265
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
+ D+L +LPS+ +E RS M+ RA+ + +G+ L + P + K
Sbjct: 266 ITDSLKRLMLPSLERELRSEMTSRAEEKAIAVFGENLSALLMQSPLKNK----------- 314
Query: 459 PRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFM 517
+ W P + ++D +G+V+D T QN ++ SK+ + +
Sbjct: 315 ---VVLGWDPAYRTGCKIAVVDETGKVLDT--TTVYPTMPQNKVEETSKE-----ITSLI 364
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
++ +++ +G S S E+ D+ MD + E+ +Y
Sbjct: 365 NKYKVNIISIGNGTASRES-------------EQIVADIVKGMDNVYYTIVSEAGASVYS 411
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
S++ ++L +++ AV++ R +Q+P++ + + E S + ++ +
Sbjct: 412 ASKLGEEELKDMNVSLRGAVSIARRIQDPMSELVKI-----EPKSIGVGQYQHDVNQKRL 466
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRK 697
++ V+ D N+VG+D+N A ++ L++ISG+ P A ++ + +G R
Sbjct: 467 SEVLSNVVEDNVNKVGVDLNTA-----SYSILEYISGITPSIAKNIVKYRDTSGKFKNRD 521
Query: 698 DFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYN 757
+ + LG+ F GFLRV+ S +LLD+T IHPE+Y +L E+ +
Sbjct: 522 ELLKVSRLGQSCFEQCAGFLRVKESD---------NLLDNTGIHPEAYEKTYKLL-EILD 571
Query: 758 RDIEGD 763
DI+ +
Sbjct: 572 VDIQSE 577
>gi|237741053|ref|ZP_04571534.1| transcription accessory protein [Fusobacterium sp. 4_1_13]
gi|229431097|gb|EEO41309.1| transcription accessory protein [Fusobacterium sp. 4_1_13]
Length = 720
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 161/763 (21%), Positives = 320/763 (41%), Gaps = 140/763 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTEELRSSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF +S +LE++ + +A +F + + ++GA+ + A
Sbjct: 123 PLAEKFYIAS-------NLEEI-----------QNLAKDFITEEVITVEDAIEGAKLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + ++++A + + K
Sbjct: 165 QNISEKAEYRERIREIYLKYSIIESKASKKAAELDEKKVYNDYYEYA-------EKVEKM 217
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK 400
+ L + + E+E +L V ++L + ++ + + + +G+ + + I+K
Sbjct: 218 PSHRILALNRGEKEDILTVHLRLEDSDRERIENMILKEFPKNGLVATYKE-------IIK 270
Query: 401 DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEAAP 459
D+LD ++PS+ +E R+ ++ RA + + L N + P + K+ + P
Sbjct: 271 DSLDRLIVPSIEREVRNDLTERAGIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRTGC 330
Query: 460 RVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMM 518
+V +G + T F ++++ N R Q ++ + LK +
Sbjct: 331 KVAVIDKYGFYRENTVFFLVEAM----------------HNPRQIQDARD---KFLKLVK 371
Query: 519 DHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYEN 578
+ +V +G S + + + + +++E +V + + +E+ +Y
Sbjct: 372 KYDIDIVSIGN---GTASRETETF--VANIIKEEKLNVKY-------LIVNEAGASVYSA 419
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTP 634
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 420 SKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL-- 477
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 478 -------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGNFK 525
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ + +
Sbjct: 526 NRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAILGK 576
Query: 755 V-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETLYLIRR 811
+ +N +E + D+ + L K+ EN ET+ +
Sbjct: 577 IGFN-----------------LEKYNNELDIAREKLKSFDYKKFAEENSFGLETVKDVYE 619
Query: 812 ELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLA 871
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 620 ALLKDRRDPRDDFEKPLLKSDILNI-----DNLQVGMELEGTVRNVVKFGAFIDIGLKND 674
Query: 872 GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 675 ALLHVSEISDKYIDDP-SKVLSVGQIIKIKIKDVDKDRGRVGL 716
>gi|342214589|ref|ZP_08707273.1| Tex-like protein N-terminal domain protein [Veillonella sp. oral
taxon 780 str. F0422]
gi|341591630|gb|EGS34761.1| Tex-like protein N-terminal domain protein [Veillonella sp. oral
taxon 780 str. F0422]
Length = 800
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 193/895 (21%), Positives = 363/895 (40%), Gaps = 173/895 (19%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE LKD EQ + D++++ L
Sbjct: 31 VPFIARYRKE-VTGELKD-EQ-------------------------LRDIEERMKYL--- 60
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ LQ R EE ++ I ++ +L D +S ++ A +E++D+ L F
Sbjct: 61 RNLLQ-----RKEEVTKSIEEQGKLT------DELSAAITKAMKLQELEDLYLPF----- 104
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK-FGYSSEQLGLQLSLEKMGDELEDPK 255
RPK+ T+ S GL +A F ++E+ L +MG E + +
Sbjct: 105 ------------RPKKRTRASMARDRGLEPLAQALFTTATEE-----ELRQMGAEYLN-E 146
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
E P + + LQGA + A E S +R+Y+R + + T
Sbjct: 147 EVP-------------TVEDALQGAMDIVAEEASERADIRQYLRKAMWETGHMKTELV-- 191
Query: 316 GDSAIDS-FHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
G+ ++ F Q+ ++P+R+ + L + + E L+V+ +P+++ +
Sbjct: 192 GEEEVNQGFLQY---NEEYKEPIRQVPSHRVLAMNRGESLGALKVSFVVPDETFIQ---- 244
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
Y+ D V +A++ + + D L PS+ +E R+ M+ +A+ + +G
Sbjct: 245 ----YMVDTVQGTARVEHSYIAEAIADGYKRLLYPSLERETRNAMTEQAEEQAIKVFGTN 300
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
L N + P + PG + ++D G V+D G
Sbjct: 301 LRNLLLQAPLSGH--------------VIMGLDPGYRTGCKMAIIDREGNVLDY---GAY 343
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
L + D+Q+++ QE K + + V L ++ S + + + M+ E
Sbjct: 344 YL---TMSDKQAERAKQELAKKI----RQYGVTLISIGNGTASYETE--QFTSAMIAEED 394
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
D + + +E+ +Y S+++ ++LP +++ AV++ R +Q+PLA +
Sbjct: 395 LDCHY-------IITNEAGASVYSASKLAIEELPDLDVSIRGAVSIARRVQDPLAESVKI 447
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFIS 673
+ S + ++ + + ++QV+ V N VG+++N A A L+ +S
Sbjct: 448 -----DPKSIGVGQYQHDVNQKQLGATLDQVVETVVNHVGVELNTA-----SPAILKHVS 497
Query: 674 GLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
G+ A ++ GA +RK + LG F GFLR+ +
Sbjct: 498 GISSTVANNIIAYRKEHGAFTSRKQLLKVARLGPAAFTQCAGFLRIGKGENP-------- 549
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL--LKTYLLD 791
LD T +HPESY +AQ + + L M+++ +R++ L K L
Sbjct: 550 -LDATPVHPESYEIAQGVLTQ----------------LGMSLDDLRNKATLETAKAKLQT 592
Query: 792 RHIKE--KKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
+++E K+ + T+ I L +D R P ++ + + + G V
Sbjct: 593 VNVEELAKQLDAGVPTVRDIVEALQKPGRDPREDLPAPMTRKQIASL-----EDMQVGTV 647
Query: 850 VQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNR 909
V+ TV V A + + G+L K ++ SD L GDI+ +I S+ R
Sbjct: 648 VKGTVHNVVDFGAFVDIGVKINGLLHKSEFC--AYHEHPSDVLAVGDIIEVEIISVDAKR 705
Query: 910 YQVFL-VCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKE 963
++ L + RE NR H +N D + + +Q K +++ K+ K+
Sbjct: 706 NRIGLSMKREKSKHLNRQGHRRNGDGNPRRDTPRKDGQQPKGERQQGRNSKNVKD 760
>gi|126656406|ref|ZP_01727667.1| RNA binding S1 [Cyanothece sp. CCY0110]
gi|126622092|gb|EAZ92799.1| RNA binding S1 [Cyanothece sp. CCY0110]
Length = 717
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 155/713 (21%), Positives = 286/713 (40%), Gaps = 153/713 (21%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+LS+ + + L+LL ++ +PFIA YRKE+ D + T
Sbjct: 9 ASELSLRQQQVKNTLELL-IEGATVPFIARYRKEKT-----------------DSLDET- 49
Query: 113 TLKWHKVLWAIHDLDKKWLLL---QKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFD 169
I D+ +++ L +KRK + K + +L D
Sbjct: 50 ---------QIRDIGERYTYLTELEKRKETILESIKSQ-----------------DKLTD 83
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
+ + +E+ ++ E++D+ L + +PKR TK + + GL ++A
Sbjct: 84 KLKQKIESCLSKTELEDLYLPY-----------------KPKRRTKATIAREKGLEKLAE 126
Query: 230 KFGYSSEQLGLQLSLEKMGDE---LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAV 286
+ SLE++ E E +T EE LQGA + A
Sbjct: 127 SIKSLNRPNAKPQSLERLAQEYISTEKDVDTVEE---------------ALQGASDILAE 171
Query: 287 EISCEPCVRKYVRSIFMDNAV-VSTCPT--PDGDSAIDSFHQFAGVKWLREKPLRKFEDA 343
E++ + +R Y+R M ++ +S P+G + + + F G + K
Sbjct: 172 EVAEKANLRAYLRDYLMQESMFISKIKKDYPEGSTKYEMYRNFQG-------SITKIAPH 224
Query: 344 QWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
L + + E EK++ + I E N + S L + E +LKD+
Sbjct: 225 NILALFRGEAEKIISLEIDFDE---NFVLSYLGSQELKTRNKPIKSFY----ESMLKDSF 277
Query: 404 DNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLA 463
+ + PS+++E R+ K+W +E ++ K+ ++P P
Sbjct: 278 NRLIKPSLLREVRA----ERKNWADIE-------SINTFEINLKELLLSPPAGMQP---T 323
Query: 464 CCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQP 522
PG + V+L +G+ +D + ++ Q+ KN E+L+K +
Sbjct: 324 LAIDPGFRTGCKVVILSETGQFLD--YQAIFPHSGES--KQKEAKNILEKLIK---KYNI 376
Query: 523 HVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRIS 582
++ +G N + + D + K +E P V IV +ES +Y S ++
Sbjct: 377 RLIAIG--NGTASRETDQFVGEVIKPLENKPIKV--------IV--NESGASIYSASDLA 424
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE 642
++ P V+ A+++GR LQ+PLA + + + ++ + L + +E
Sbjct: 425 REEFPDLDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKN-----LE 479
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTA 702
+ + N VG+D+N A + L F+SG+ P A ++ + G TRK+ +
Sbjct: 480 ETVESCVNYVGVDLNTASKK-----LLTFVSGITPTIANNIVSYRDKNGKFNTRKELLKV 534
Query: 703 HGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LG K F A GFLR+R LD+T +HPESY + + + K++
Sbjct: 535 SKLGPKAFEQAAGFLRIREGKNP---------LDNTAVHPESYEIVETIIKQL 578
>gi|168185953|ref|ZP_02620588.1| protein YhgF [Clostridium botulinum C str. Eklund]
gi|169295878|gb|EDS78011.1| protein YhgF [Clostridium botulinum C str. Eklund]
Length = 718
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 169/762 (22%), Positives = 311/762 (40%), Gaps = 148/762 (19%)
Query: 178 AETEREVDDVDLKFNLHFPPGEVGVDEGQYK--RPKRSTKYSSCSKAGLWEVASKFGYSS 235
AE E+ +++ LK N EV E Y+ +PK+ T+ + + GL +A
Sbjct: 76 AEQEKLTEELQLKINKCETLTEV---EDIYRPFKPKKRTRATIAVEKGLKPLAE------ 126
Query: 236 EQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVL------QGARHMAAVEIS 289
+ L E GD N+ N + VL GA+ + A IS
Sbjct: 127 ----VILKGEFTGD------------IENYAKEFINEEKEVLTIEDALNGAKDIVAEAIS 170
Query: 290 CEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
E RK++R N V+ + D + + +++++ + + K + L I
Sbjct: 171 DEAEYRKWIREYVRKNGVIECSGSSDEPTPYEMYYEYS-------EAVSKIPSHRILAIN 223
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLP 409
+ E+EK+L ++K+ D+ + YL+ K + + E ++D+L + P
Sbjct: 224 RGEKEKIL--SVKVVCDTYKII------DYLNKKSIKDNSITDKYIEESVEDSLKRLIYP 275
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG 469
S+ +E R+ ++ + + + + L + P + K + + PG
Sbjct: 276 SIEREIRAELTDKGEEGAIEVFKANLSALLMQAPIKGK--------------VVLGYDPG 321
Query: 470 -KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD----HQPHV 524
+ +LD +G+++D + +ND E +K + + H V
Sbjct: 322 FRTGCKIAVLDDTGKLLDTATVYA-----------TAPQNDVEGSIKILKELVYKHNVDV 370
Query: 525 VVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSD 584
V LG S S E++ ++++E +++G + L V E+ +Y S ++S
Sbjct: 371 VSLGNGTASRES-----EEVLARLIDEVKKEIGKD---LFYVVVSEAGASVYSASELASK 422
Query: 585 QLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQV 644
+ P +++ A+++GR LQ+P+A + + P S + ++ + P + V
Sbjct: 423 EYPNINVSIRGAISIGRRLQDPMAELVKI-DPK----SIGVGQYQHDVAPKRLDESLSGV 477
Query: 645 MVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG 704
+ DV N VG+D+N+A + L +ISG+ A ++ G RK+ +
Sbjct: 478 VEDVVNSVGVDLNIATP-----SLLSYISGVNSTIAKNIVEYREENGKFKNRKELLKVKR 532
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV--YNRDIE- 761
LG K F GFLRV S + +LD+T +HPESY + K + DI+
Sbjct: 533 LGPKAFEQCAGFLRVTESKE---------VLDNTAVHPESYKATKGFLKILGYTEEDIKN 583
Query: 762 GDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRREL---IHGFQ 818
G LND +D +KE E+ + REL + +
Sbjct: 584 GRLND-----------------------IDAKVKENGVED-------LARELEVGVPTLK 613
Query: 819 DWRNQYKEPSQD--EEF---YMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
D + K+P +D EE G + + L G ++ TVR V A + G
Sbjct: 614 DIIKEIKKPGRDPREELPKPIFKKGIVDINQLKPGMMLTGTVRNVADFGAFVDIGVHQDG 673
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
++ SD + + L D + GDI+ K+ + + R ++ L
Sbjct: 674 LVHISQLSDKFVKNPL-DIVKVGDIVEVKVLEVDEKRGRISL 714
>gi|289765589|ref|ZP_06524967.1| transcription accessory protein [Fusobacterium sp. D11]
gi|289717144|gb|EFD81156.1| transcription accessory protein [Fusobacterium sp. D11]
Length = 722
Score = 100 bits (250), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 170/764 (22%), Positives = 320/764 (41%), Gaps = 142/764 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y++ L E + +A +F + + ++GA + A
Sbjct: 123 PLAEKF-YTANNL-----------------EEIQNLAKDFITEEVPTVEDAIEGAMLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + +++++ + + K
Sbjct: 165 QNISEKAEYRERIREIYLKYSIIESKASKKATELDEKKVYNDYYEYS-------EKVEKM 217
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD--CKEHYLSDGVSKSAQLWNDQRELI 398
+ L + + E+E +L V ++L EDS + + KE +D V + I
Sbjct: 218 PSHRILALNRGEKEDILTVHLRL-EDSDRERIENMILKEFPKNDLVETYKE--------I 268
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEA 457
+KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 269 IKDSLDRLIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRT 328
Query: 458 APRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF 516
+V +G + T F ++++ N R Q ++ + LK
Sbjct: 329 GCKVAVIDKYGFYRENTVFFLVEAM----------------HNPRQIQDARD---KFLKL 369
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ + +V +G S + + + + +++E +V + + +E+ +Y
Sbjct: 370 VKKYDIDIVSIGN---GTASRETETF--VANIIKEEKLNVKY-------LIVNEAGASVY 417
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFL 632
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 418 SASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIEPKSIGVGMYQHDVNQSKLDESL 477
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 478 ---------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGN 523
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ +
Sbjct: 524 FKNRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAIL 574
Query: 753 KEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETLYLIR 810
+ I DL + L +A E LK++ K+ EN ET+ +
Sbjct: 575 GK-----IGFDLEKYNNELNVAREK-------LKSF----DYKKFAEENNFGLETVKDVH 618
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGL 870
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 619 EALLKDRRDPRDDFEKPLLKSDILNI-----DNLQVGMELEGTVRNVVKFGAFIDIGLKN 673
Query: 871 AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 674 DALLHVSEISDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 716
>gi|149278329|ref|ZP_01884467.1| S1 RNA-binding domain protein [Pedobacter sp. BAL39]
gi|149231095|gb|EDM36476.1| S1 RNA-binding domain protein [Pedobacter sp. BAL39]
Length = 782
Score = 100 bits (250), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 163/706 (23%), Positives = 283/706 (40%), Gaps = 152/706 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+LS++ ++ ++LL + +PFI+ YRKE SL +EV
Sbjct: 11 ELSVAEKQVLATIELLD-EGATVPFISRYRKEVTGSL------DEVQ------------- 50
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
+ I D ++ L KR+ A+ LA +L +
Sbjct: 51 -----VAGIRDRFQQLRELDKRREAILKA-----------------LAALDKLTPELEAQ 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
L AA ++D+ L + +PKR T+ S K GL
Sbjct: 89 LNAAANIATIEDIYLPY-----------------KPKRKTRASEARKKGL---------- 121
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNF---KCAMFNSSQAVLQGARHMAAVEISCE 291
E L L + LE K PE A+ F + + ++ +A L GAR + A I+
Sbjct: 122 -EPLALTI--------LEQGKSDPEAEAAKFLNEELGVHHAEEA-LAGARDIIAEIINEN 171
Query: 292 PCVRKYVRSIFMDNAVV-STCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQK 350
R +R F A ST + I F +W E+PL+ + L +++
Sbjct: 172 AETRTSMRHYFQQKATFKSTVVKGKEEEGIKYKDYF---EW--EEPLKGAPSHRVLAMRR 226
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPS 410
E E +L++ +PE+ D L KSA L Q ++ ++D L P+
Sbjct: 227 GENESILKLET-MPEE-------DGAIDILERQYVKSANLAGAQVKMAIQDCYKRLLGPA 278
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG- 469
M EARSL +A + + + + P +K+ VLA PG
Sbjct: 279 METEARSLSKEKADEEAIRVFVENARQLLLAAPMGQKN------------VLAI--DPGF 324
Query: 470 KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA 529
+ V LD G++++ T Q + KN ++L + H+ + +G
Sbjct: 325 RTGCKVVCLDRQGKLLENTTIYPHT-------GQGNIKNAADKLNELCKKHEVEAIAIG- 376
Query: 530 VNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQ 589
+ T+ ++ E R +G + +++V +E+ +Y S ++ ++ P Q
Sbjct: 377 ---NGTAGRE---------TEVFVRGLG--LTGITVVMVNENGASIYSASEVAREEFPTQ 422
Query: 590 KGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
V+ AV++GR L +PLA + + + ++ +N L ++ +V
Sbjct: 423 DITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKLQQS-----LDDTVVSCV 477
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+++N A + L ++SGLGP+ A ++ GA R+ LG K
Sbjct: 478 NAVGVELNTASKQ-----VLAYVSGLGPQLAQNIVNYRNEHGAFKNRESLKKVPRLGDKA 532
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
F A GFLR+R + Q +LD + +HPE Y L ++A+++
Sbjct: 533 FEQAAGFLRIRDAEQ---------VLDTSGVHPERYALVNKMARDL 569
>gi|319937112|ref|ZP_08011519.1| transcription accessory protein [Coprobacillus sp. 29_1]
gi|319807478|gb|EFW04071.1| transcription accessory protein [Coprobacillus sp. 29_1]
Length = 715
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 159/710 (22%), Positives = 283/710 (39%), Gaps = 165/710 (23%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L+IS I L LL + +PFIA YRKE+ L N D + +
Sbjct: 12 ELNISEKQIENVLSLLQ-EGATVPFIARYRKEKTDGL---------NEDQIREISKVYEY 61
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
+ + LQ+RK E+ R+ DE + L + L + I K
Sbjct: 62 QMN---------------LQQRK------------EDVIRLIDEKGM-LTEDLRNQILK- 92
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRP---KRSTKYSSCSKAGLWEVASKF 231
AE EV+D Y RP K+ TK S GL A
Sbjct: 93 ---AEKLSEVED--------------------YYRPFKEKKKTKASVAKAKGLEPFALDI 129
Query: 232 GYSSEQLGLQLSLEKMGDE----LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVE 287
S Q L+ + +K +E +ED +QGA+ + A +
Sbjct: 130 LKLSRQFDLEAAAQKYLNEEVLTIEDA----------------------IQGAKDIIAEQ 167
Query: 288 ISCEPCVRKYVRSIFMDNAVVSTC---PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ 344
IS EP RKY + + ++++ PD D + ++ + + ++ +
Sbjct: 168 ISDEPRYRKYTKDMIYKTGIITSSVKKKNPDEDGIYEMYYDY-------NEKVQYIASHR 220
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQL-WNDQRELILKDAL 403
L + +AE+EK+L V+I + E+ E+Y+ +GV + + ND + +KDA
Sbjct: 221 ILAMNRAEKEKVLNVSITIDEEKF--------ENYIYNGVMRKRESNLNDFIMICVKDAF 272
Query: 404 DNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLA 463
+ PS+ +E RS ++ +A+ L + L + P KD + P
Sbjct: 273 KRLIYPSVEREVRSELTEKAQEQALKVFSINLEKLLLQAPL--KDRYVLG---VDPAFRT 327
Query: 464 CCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
C +D +G+V+D+ ++ +D++ LL + +++
Sbjct: 328 GC--------KLAAIDPTGKVLDINKVFITLPKADYTKDEKI-------LLSMIQEYKIE 372
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
++ +G S + I + ++++ ++ + V E+ +Y S I+
Sbjct: 373 IIAIGNGTASRET-----ESFIAEFIKKNALNLQY-------VIVSEAGASVYSASAIAK 420
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQ 643
++ P + + AV++ R LQ+PLA + + + ++ + LT ++
Sbjct: 421 EEFPTYQVEERSAVSIARRLQDPLAELVKIEPKAISVGQYQHDMNQKKLTEQ-----LDF 475
Query: 644 VMVDVTNQVGLDINLAIHREWQFAP--LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVT 701
V+ V NQVG++IN A +P LQ++SGL A ++ + G +R
Sbjct: 476 VVEKVVNQVGVNINTA-------SPSLLQYVSGLSMTLAKNIVKYREENGKFTSRDQIKK 528
Query: 702 AHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
H LG K + AVGFLR+ + D+T IHP++Y A L
Sbjct: 529 VHKLGDKTYELAVGFLRILSGNER---------FDETSIHPDNYQDASRL 569
>gi|153810051|ref|ZP_01962719.1| hypothetical protein RUMOBE_00432 [Ruminococcus obeum ATCC 29174]
gi|149834229|gb|EDM89309.1| Tex-like protein N-terminal domain protein [Ruminococcus obeum ATCC
29174]
Length = 723
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 157/687 (22%), Positives = 285/687 (41%), Gaps = 160/687 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL ND+ RT H+ L + +L+ +K+
Sbjct: 37 IPFISRYRKEATGSL-------------NDEQLRT----LHERLTYLRNLE------EKK 73
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
L S EE ++ E R +Q+ D A+T V+D+ F
Sbjct: 74 NQVLGSI------EEQGKLTAELR----KQILD--------AQTLVVVEDLYRPF----- 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + GL +A+ + LQ++ + + +E +D
Sbjct: 111 ------------RPKRRTRAIIAKEKGLEPLAN-------IIMLQMTDKPIEEEAQD--- 148
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN-AVVSTCPTPD 315
+ S + GA+ + A IS E R Y+R + MD +V ST P+
Sbjct: 149 ------FVLEDKGVESVADAINGAKDIIAEHISDEADYRIYLRKLTMDRGSVASTAKKPE 202
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS----LNKL 371
S + +++F E+P++K + L + + E+EK+L V + PE+ L K
Sbjct: 203 ESSVYEMYYEF-------EEPIKKLAGHRVLALNRGEKEKILTVKVNAPEEEAMGWLQKQ 255
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
KE+ ++ + + +++D+ + P++ +E RS ++ +A+ + +
Sbjct: 256 VI-TKENPITKPILRE----------VVEDSYKRLIAPAIEREIRSDLTEKAEDGAIHVF 304
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VL 488
GK L + P K + W P + ++D +G+V+D V+
Sbjct: 305 GKNLEQLLMQPPIVGK--------------VVLGWDPAFRTGCKLAVVDETGKVLDTTVI 350
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
+ T + + +E L K + + ++ LG S S +II ++
Sbjct: 351 YPTAPT-------NDAKIRAAKETLKKLIKKYNVSLISLGNGTASRES-----EQIIVEL 398
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
++E P V + V +E+ +Y S++++++ P + A ++ R LQ+PLA
Sbjct: 399 LKEIPEKVQY-------VITNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLA 451
Query: 609 MVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+ + G G+ L L+ G++E D N+VG+D+N A
Sbjct: 452 ELVKITPQSIGVGQYQHDMNQKKLGEALS-----GVVE----DCVNKVGVDLNTA----- 497
Query: 665 QFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
+ L++ISG+ A ++ G +R++ + LG K F GF R+ G+
Sbjct: 498 SASLLEYISGISKVIAKNIVAYREENGRFESRRELLKVAKLGPKAFEQCAGFARI-TGGK 556
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQEL 751
+ LD T +HPESY AQ++
Sbjct: 557 --------NPLDATSVHPESYEAAQKV 575
>gi|288574247|ref|ZP_06392604.1| RNA binding S1 domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569988|gb|EFC91545.1| RNA binding S1 domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 717
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 168/722 (23%), Positives = 285/722 (39%), Gaps = 159/722 (22%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L I R ++ LL + +PFIA YRKE SL +EV
Sbjct: 12 ELRIPRKNVEATAALLE-EGCTVPFIARYRKEATGSL------DEV-------------- 50
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
+ I D ++ KR++++ S ++R L + +
Sbjct: 51 ----AIAGIRDGLERLAETDKRRASMVSSLEER-----------------GLLTEELKAK 89
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
L+ A T ++D+ L F RPKR TK + + GL +A + S
Sbjct: 90 LDKAATMTALEDIYLPF-----------------RPKRRTKATVAREKGLEPLA-RIIMS 131
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
E L+ + DE + NS Q L+GAR++ + EIS
Sbjct: 132 QEGADLEAEASRFLDEEQG----------------VNSIQEALEGARNIISEEISENGEA 175
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
R +R++F+ + P + F ++ W E+P+ K + L + + E E
Sbjct: 176 RMEMRALFVRRGTLKAKMKPGKEEEGSRFADWS--DW--EEPMAKAPSHRILAMFRGESE 231
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
+L V+++ P+++ H L K + ++Q + ++D L SM E
Sbjct: 232 GVLSVSVRPPQEAAI--------HRLESRFVKGEKADSNQVKEAVEDGYKRLLESSMETE 283
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
AR + +A + + K + + P +K RV+A PG +
Sbjct: 284 ARKALKSKADREAISVFVKNVREVLMAPPLGQK------------RVMA--LDPGFRTGC 329
Query: 474 TFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG--- 528
V LD +GE++ + +F SQ R+Q E + K + V +G
Sbjct: 330 KLVCLDETGEMLHHETVFPHT----SQARREQA-----MESVAKLFGQYGIEAVAVGNGT 380
Query: 529 AVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPG 588
A + LKD + E G E I +ES +Y S ++ ++ P
Sbjct: 381 AGRETEAFLKDCLPE-------------GAE-----IYSVNESGASIYSASALAREEFPD 422
Query: 589 QKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDV 648
+ + AV++GR L +PLA + + + S + ++ + E ++ V+
Sbjct: 423 LDVSYRGAVSIGRRLMDPLAELVKV-----DPKSIGVGQYQHDVDQKELKKALDDVVASC 477
Query: 649 TNQVGLDINLAIHREWQFAP--LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLG 706
N VG+++N A +P L F+SGL + A S+ + G TRKD + GLG
Sbjct: 478 VNSVGVEVNTA-------SPQLLSFVSGLSLKLAKSVVERRRKEGPFKTRKDLLKVSGLG 530
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND 766
K + A GFLR+R LD++ +HPE Y L +A+++ R I L D
Sbjct: 531 PKTYQQAAGFLRIRGGSHP---------LDNSAVHPERYDLVNSMAEDL-GRSISDLLED 580
Query: 767 DE 768
E
Sbjct: 581 GE 582
>gi|255283228|ref|ZP_05347783.1| protein YhgF [Bryantella formatexigens DSM 14469]
gi|255266301|gb|EET59506.1| Tex-like protein N-terminal domain protein [Marvinbryantia
formatexigens DSM 14469]
Length = 724
Score = 100 bits (249), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 136/590 (23%), Positives = 258/590 (43%), Gaps = 103/590 (17%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + K + AAET VDD L+ P RPKR T+ + + GL
Sbjct: 87 KLTEELKKQILAAETLVVVDD------LYRP-----------YRPKRRTRATIAKEKGLE 129
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A + L LQ + + E + P PE+ N+++ +QGA + A
Sbjct: 130 GLA-------DVLLLQRTNRTLQQEAQ-PYINPEKD--------VNTAEEAVQGAMDIIA 173
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDG-DSAIDSFHQFAGVKWLREKPLRKFEDAQ 344
IS E R +R + +++ + +S + ++QFA +P++K +
Sbjct: 174 ENISDEAAYRIRIREMTEKEGMLTASAKDESVESVYEMYYQFA-------EPVQKLAGHR 226
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
L I + E+EK+L V ++ PE+++ + K+ + D S L RE I D+
Sbjct: 227 ILAINRGEKEKILSVKLEAPEENILRFLE--KKVIIRDNPVTSPVL----RETI-ADSYR 279
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
+ P++ +E RS ++ +A+ + +GK L + P A VL
Sbjct: 280 RLIAPAIEREVRSALTEKAEDGAISVFGKNLAQLLMQPPI------------AGQVVLG- 326
Query: 465 CWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQ 521
W P + ++D++G+V+D V++ T ++Q + ++ L + + +
Sbjct: 327 -WDPAFRTGCKLAVVDATGKVLDTTVIYPTAPT-------NEQKIRAAKDTLKRLISKYH 378
Query: 522 PHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRI 581
++ LG S S +II ++++E P V + V +E+ +Y S++
Sbjct: 379 ITLISLGNGTASRES-----EQIIVELLKELPVPVQY-------VITNEAGASVYSASKL 426
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI 641
++++ P + A ++ R +Q+PLA + + P S + ++ + + +
Sbjct: 427 ATEEFPNFDVGQRSAASIARRVQDPLAELVKI-DPK----SIGVGQYQHDMNQKKLGETL 481
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVT 701
E V+ D N+VG+D+N A + L+++SG+ A ++ G RK +
Sbjct: 482 EGVVEDCVNKVGVDLNTA-----SASLLEYVSGITKTIAKNIVAYREENGRFTDRKQLLK 536
Query: 702 AHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
LG K + GFLR+ + + LD T +HPE+Y AQ+L
Sbjct: 537 VAKLGPKAYEQCAGFLRI---------TGGTNPLDGTSVHPETYPAAQQL 577
>gi|225375199|ref|ZP_03752420.1| hypothetical protein ROSEINA2194_00824 [Roseburia inulinivorans DSM
16841]
gi|225212950|gb|EEG95304.1| hypothetical protein ROSEINA2194_00824 [Roseburia inulinivorans DSM
16841]
Length = 748
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 190/859 (22%), Positives = 347/859 (40%), Gaps = 199/859 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ND+ R ++ L + +L+ +++
Sbjct: 66 IPFIARYRKEVTGSL-------------NDEVLRN----LYERLTYLRNLE------ERK 102
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ L S EE ++ DE L Q+ AAET V+D L+ P
Sbjct: 103 ETVLNSI------EEQGKLTDE----LKAQIL--------AAETMVAVED------LYRP 138
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK PKR T+ + + GL +A+ L LE + +P++
Sbjct: 139 ----------YK-PKRRTRATIAKERGLEPLANVITLQM----LNTPLEAEAAKFINPEK 183
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
NS++ + GA+ + A +S E R +R + M V ST P+
Sbjct: 184 E------------VNSAEDAIAGAKDIIAEAVSDEADYRTRIRDLTMKKGHVTSTAKDPE 231
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + +++F ++P+ K + L + + E EK+L V ++ PE+ + +
Sbjct: 232 AESVYEMYYEF-------DEPVNKLAGHRILALNRGENEKILNVKVEAPEEDILRFLE-- 282
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
++ D + + L ++ DA D + P++ +E RS ++ A+ + +GK L
Sbjct: 283 RKVITRDNPNTTPVLKE-----VVADAYDRLIAPAIEREIRSSLTEMAEDGAIRVFGKNL 337
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGC 492
+ P A VL W P + ++D +G+V+D V++
Sbjct: 338 EQLLMQPPI------------AGQVVLG--WDPAFRTGCKLAVVDPTGKVLDTTVIYPTA 383
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
Q+K + + +LK ++ H+ ++ N + + + ++I +++E
Sbjct: 384 ----------PQNKVEEAKTVLKKLISKY-HITLISLGNGTASRESE---QVIVDLLKEI 429
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
P V + + +E+ +Y S++++++ P + A ++ R LQ+PLA +
Sbjct: 430 PVKVQY-------IIVNEAGASVYSASKLATEEFPNFDVGQRSAASMARRLQDPLAELVK 482
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ L L+ G++E D N+VG+D+N A +
Sbjct: 483 IDPKSIGVGQYQHDMNQKKLSEALS-----GVVE----DCVNKVGVDLNTA-----SASL 528
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L++ISG+ A ++ G +R + LG K + GF+R+
Sbjct: 529 LEYISGISKVIAKNIVAYREENGRFGSRNQLLKVAKLGPKAYEQCAGFMRITDGKNP--- 585
Query: 729 SQFIDLLDDTRIHPESYGLAQEL-------AKEVYNRDIEG----DLNDDEDALEMAIEH 777
LD T +HPESY ++L ++V NR+++G N D+ A E+ I
Sbjct: 586 ------LDATGVHPESYDATKKLLDKLGFTMEDVKNRNLDGISKKISNYDKLAEELGIGA 639
Query: 778 VRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMIS 837
+ TL I +EL +D R +P +
Sbjct: 640 I--------------------------TLQDIVKELEKPARDPREDMPKPILRSDVL--- 670
Query: 838 GETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDI 897
E +D L G V++ TVR V A + G++ SD + L + + GDI
Sbjct: 671 -EMKD-LTPGMVLKGTVRNVIDFGAFVDIGVHQDGLVHISQMSDKFIKHPL-EVVSVGDI 727
Query: 898 LTCKIKSI--QKNRYQVFL 914
+ K+ S+ +K R Q+ +
Sbjct: 728 VEVKVMSVDLKKQRIQLTM 746
>gi|282858144|ref|ZP_06267339.1| S1 RNA binding domain protein [Pyramidobacter piscolens W5455]
gi|282584066|gb|EFB89439.1| S1 RNA binding domain protein [Pyramidobacter piscolens W5455]
Length = 719
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 162/696 (23%), Positives = 270/696 (38%), Gaps = 176/696 (25%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE+ SL +EV + AI D + L+KR
Sbjct: 32 VPFIARYRKEKTGSL------DEV------------------AITAIRDGLARIEELEKR 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ A+ +R L + + K+++AA T ++D L F
Sbjct: 68 REAILGSLSER-----------------GILTEELKKTIDAAATMTALEDAYLPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ +AGL +A LE
Sbjct: 106 ------------RPKRRTRALIAREAGLQPLADAL-------------------LEQKGR 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGA------RHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
P+E+A+++ N + V R + A +S P VR+ +R IF+ V +
Sbjct: 135 APQELAADY----VNEEKGVADAEAALAGARDIIAENVSENPAVRQDMRVIFVRFGVCVS 190
Query: 311 CPT------PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP 364
P+ + D F W ++PL + + L + + E+E L +++ P
Sbjct: 191 SVVEKKKEEPEAATYADYFD------W--KEPLLRVPSHRLLAVMRGEKEGYLSFSVR-P 241
Query: 365 ED--SLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
E+ +L KL++ Y++ S Q+ E + D L PSM EARS + R
Sbjct: 242 EEKLALEKLYA----RYVTGSGEDSKQV-----EAAVTDGYRRLLAPSMETEARSTLKKR 292
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSG 482
A + + + + L + P+ + P P + C V LDS G
Sbjct: 293 ADADAIAIFARNLRELLMASPFGAR-----PIMAIDPGIRTGC--------KVVCLDSKG 339
Query: 483 EVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIY 542
D+L + ++ + + Q+ E + +P V +G S
Sbjct: 340 ---DLLHHTVIFIQRSDAQYAQAG----ETIRALAAHFKPDAVAVGNGTAS--------- 383
Query: 543 EIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRY 602
+ EE R G ++D + I+ ES +Y S ++ + P Q V+ AV++GR
Sbjct: 384 ----RETEEFLR--GLDLD-IPIIVVSESGASVYSASELARKEFPDQDVTVRGAVSIGRR 436
Query: 603 LQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINL 658
L +PLA + + G G+ L+N L + +V N VG+D+N
Sbjct: 437 LMDPLAELVKIDPKSIGVGQYQHDVDQKQLKNAL---------DDTVVSCVNAVGVDLNT 487
Query: 659 AIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLR 718
A + L ++SGL P A ++ + GA R+D + LG K + A GFLR
Sbjct: 488 ASAKL-----LSYVSGLTPLLAENVVKFRENEGAFKRRQDVLKVPRLGPKAYQQAAGFLR 542
Query: 719 VRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+R + LD + +HPE+YG+ +A +
Sbjct: 543 IRDAENP---------LDASAVHPENYGIVDAIAAD 569
>gi|383763700|ref|YP_005442682.1| hypothetical protein CLDAP_27450 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381383968|dbj|BAM00785.1| hypothetical protein CLDAP_27450 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 734
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 136/566 (24%), Positives = 233/566 (41%), Gaps = 98/566 (17%)
Query: 206 QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF 265
Q RPKR T+ S + GL +A L L+ + G E PE A F
Sbjct: 107 QPYRPKRRTRASIARERGLQPLAD----------LILAQPRRG-------EKPESAARAF 149
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG---DSAIDS 322
S + L GAR + A IS VR R+ M A + T DG + I S
Sbjct: 150 IGDAVPSVEDALAGARDIVAETISDNAEVRHQTRAKAMRFATL-TAARIDGAADERGIYS 208
Query: 323 FHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE----DSLNKLFSDCKEH 378
+ + R KP Q L I + E +K+L+V+I++PE ++ K+F D H
Sbjct: 209 LYYAFTSRVDRLKPY------QVLAINRGERQKVLRVSIEIPERDWRQTIQKIFPD---H 259
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
LS W +Q ++DA LLP++ ++ RS ++ A++ + + L
Sbjct: 260 PLSP--------WAEQLREAIEDAARRLLLPAIERDVRSALTEMAETHAIRVFAANLRGL 311
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRS 497
++ P + PG + ++D SG++ L +
Sbjct: 312 LTQPPLAGH--------------VVIGIDPGYRTGCKVAVVDPSGKL----------LET 347
Query: 498 QNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVG 557
+ + +E L + H L A+ S + + +++ +++ + G
Sbjct: 348 ATIYPHPPQNQRREALALLTGLARRHRATLIAIGNGTASRETE--QLVAELIRQWEDARG 405
Query: 558 H----------EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
H E+ L + +E+ +Y S ++ +LP +++ AV++ R + +PL
Sbjct: 406 HDRVRANSHEVELPCLRYLIVNEAGASVYSASPLARAELPDLDVSLRGAVSIARRVLDPL 465
Query: 608 AMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
A + + + S + ++ + ++ V+ V NQVG+D+N A A
Sbjct: 466 AELVKI-----DPKSIGVGLYQHDVDQKALAAALDGVVESVVNQVGVDVNTA-----SPA 515
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L +++G+GP+ AA++ G TR GLG K F A GFLRVR +
Sbjct: 516 LLTYVAGVGPKLAANIVAHRNEHGPFPTRAALKQVAGLGPKAFEQAAGFLRVRNGPEP-- 573
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAK 753
LD + IHPESY A+++ K
Sbjct: 574 -------LDASAIHPESYATARQVLK 592
>gi|336420099|ref|ZP_08600341.1| S1 RNA binding domain protein [Fusobacterium sp. 11_3_2]
gi|336162061|gb|EGN65050.1| S1 RNA binding domain protein [Fusobacterium sp. 11_3_2]
Length = 760
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 169/764 (22%), Positives = 321/764 (42%), Gaps = 142/764 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 118 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 160
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y++ L E + +A +F + + ++GA + A
Sbjct: 161 PLAEKF-YTANNL-----------------EEIQNLAKDFITEEVPTVEDAIEGAMLIIA 202
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + +++++ + + K
Sbjct: 203 QNISEKAEYRERIREIYLKYSIIESKASKKATELDEKKVYNDYYEYS-------EKVEKM 255
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD--CKEHYLSDGVSKSAQLWNDQRELI 398
+ L + + E+E +L V ++L EDS + + +E +D V + I
Sbjct: 256 PSHRILALNRGEKEDILTVHLRL-EDSDRERIENMILREFPKNDLVETYKE--------I 306
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEA 457
+KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 307 IKDSLDRLIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRT 366
Query: 458 APRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF 516
+V +G + T F ++++ N R Q ++ + LK
Sbjct: 367 GCKVAVIDKYGFYRENTVFFLVEAM----------------HNPRQIQDARD---KFLKL 407
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ + +V +G S + + + + +++E +V + + +E+ +Y
Sbjct: 408 VKKYDIDIVSIGN---GTASRETETF--VANIIKEEKLNVKY-------LIVNEAGASVY 455
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFL 632
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 456 SASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL 515
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 516 ---------DSVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGN 561
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ +
Sbjct: 562 FKNRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAIL 612
Query: 753 KEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETLYLIR 810
+ I DL + L++A E LK++ K+ EN ET+ +
Sbjct: 613 GK-----IGFDLEKYNNELDVAREK-------LKSF----DYKKFAEENNFGLETVKDVH 656
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGL 870
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 657 EALLKDRRDPRDDFEKPLLKSDILNI-----DNLQVGMELEGTVRNVVKFGAFIDIGLKN 711
Query: 871 AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 712 DALLHVSEISDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 754
>gi|331092592|ref|ZP_08341411.1| hypothetical protein HMPREF9477_02054 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330400603|gb|EGG80217.1| hypothetical protein HMPREF9477_02054 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 718
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 200/859 (23%), Positives = 350/859 (40%), Gaps = 196/859 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNN--DDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
IPFI+ YRKE SL ND FER L+ L +
Sbjct: 31 IPFISRYRKEVTGSL----------NDEQLRQLFERLTYLRN---------------LEE 65
Query: 135 KRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLH 194
K++ L S EE ++ +E R + + AET VDD L+
Sbjct: 66 KKEQVLSSI------EEQEKLTEELR------------RQIMMAETLVVVDD------LY 101
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
P RPKR T+ + + GL E L ++++K +E
Sbjct: 102 RP-----------YRPKRRTRATIAKEKGL-----------ESLAALITMQKTNVPVE-- 137
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPT 313
E+ + S K + + L GA+ + A IS E R Y+R+ ++ST
Sbjct: 138 -ESAKAYLSEEKGV--QTVEEALAGAKDIIAEYISDEADYRIYLRNFTAKQGKLISTAKD 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+S + ++ F E+P+ K + L + + E+EK+LQ+ I++PE+ +
Sbjct: 195 DTVESVYEMYYDF-------EEPVNKLAGHRVLALNRGEKEKILQLKIEVPEEKVI---- 243
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLM 429
YL V S + ILK+A+++ + P++ +E R+ ++ +A+ +
Sbjct: 244 ----QYLEKKVIHSDNAYTTP---ILKEAIEDSYKRLIAPAIEREIRNELTEKAEDGAIS 296
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD-- 486
+GK L + P K + W P + ++D +G+V+D
Sbjct: 297 VFGKNLEQLLMQPPIANK--------------VVLGWDPAFRTGCKLAVVDETGKVLDTT 342
Query: 487 VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
V++ T Q +E L K + + ++ LG S S II
Sbjct: 343 VIYPTAPT-------TPQKIAQAKETLKKLIRKYGITLISLGNGTASRES-----EMIIV 390
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
++++E P +V + + +E+ +Y S++++++ P + A ++ R +Q+P
Sbjct: 391 ELLKEIPENVQY-------MITNEAGASVYSASKLATEEFPQFDVGQRSAASIARRVQDP 443
Query: 607 LAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
LA + + E S + ++ L + + V+ D N+VG+D+N A
Sbjct: 444 LAELVKI-----EPKSIGVGQYQHDLNQKKLSETLSGVVEDCVNKVGVDLNTA------S 492
Query: 667 AP-LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
AP L +ISG+ A ++ G +RK+ + LG K F GF+R++
Sbjct: 493 APLLSYISGISSAVAKNIVAYREENGRFKSRKELLKVAKLGPKAFEQCAGFMRIQGGKNP 552
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELA-KEVYN-RDI-EGDLNDDEDALEMAIEHVRDRP 782
LD T +HPESY +A++L K+ ++ +DI EG L+
Sbjct: 553 ---------LDSTSVHPESYEVAEKLLEKQGFSLQDIAEGKLSS---------------- 587
Query: 783 DLLKTYLLDRHIK-EKKRENKRE----TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMIS 837
L + IK EKK N+ E TL I +EL +D R++ +P +
Sbjct: 588 -------LSKTIKDEKKLANELEVGEITLKDIIKELEKPGRDPRDEMPKPILRTDVL--- 637
Query: 838 GETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDI 897
E +D L EG V++ TVR V + G++ +D + + GDI
Sbjct: 638 -EMKD-LTEGMVLKGTVRNVIDFGVFVDIGVHQDGLVHISQITDKKFIKHPLEVVSVGDI 695
Query: 898 LTCKIKS--IQKNRYQVFL 914
+ K+ S ++K R Q+ +
Sbjct: 696 VDVKVMSVDVKKKRIQLTM 714
>gi|325264051|ref|ZP_08130783.1| S1 RNA binding domain protein [Clostridium sp. D5]
gi|324030535|gb|EGB91818.1| S1 RNA binding domain protein [Clostridium sp. D5]
Length = 717
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 132/558 (23%), Positives = 240/558 (43%), Gaps = 108/558 (19%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL E L + L++ D LE KE + ++
Sbjct: 105 RPKRRTRATIAKEKGL-----------EPLAAVIMLQQTKDPLE--KEARKYISEEKGVG 151
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSAIDSFHQFA 327
+++ + GA+ + A IS E R ++R I V+S PD +S + ++ F
Sbjct: 152 ---TAEEAIGGAKDIIAESISDEADYRSWIRKITTQKGKVISVAKDPDAESVYEMYYDF- 207
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
E+P+ K + L + + E+EK+L V ++ PE+ + + YL K+
Sbjct: 208 ------EEPVSKLAGHRILALNRGEKEKVLTVKLEAPEEDIIR--------YLE---KKT 250
Query: 388 AQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+ N +LKDA+++ + P++ +E R+ ++ +A+ + +GK L + P
Sbjct: 251 IRQNNPYTSPVLKDAVEDSYKRLIAPAIEREIRNELTEKAEDGAIEVFGKNLHQLLMQPP 310
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
A VL W P + ++D +G+V+ G +
Sbjct: 311 I------------AGHVVLG--WDPAFRTGCKLAVVDETGKVL-----GTTVIYPTAPTT 351
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
Q K ++ L K + + ++ +G S S +II ++++E P++V +
Sbjct: 352 PQKIKASKDLLKKIIAKYNITLISVGNGTASRES-----EQIIVELLKEIPQNVQY---- 402
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
V +E+ +Y S+++S++ P + A ++ R LQ+PLA + + G G+
Sbjct: 403 ---VIVNEAGASVYSASKLASEEFPKFDVGQRSAASIARRLQDPLAELVKIDPKSIGVGQ 459
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP-LQFISGLGP 677
L L G++E D N+VG+D+N A AP L +ISG+
Sbjct: 460 YQHDMNQKKLGESLN-----GVVE----DCVNKVGVDLNTA------SAPLLSYISGI-- 502
Query: 678 RKAASLQRSLV----RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
AS+ +++V G RK+ + LG K + GF+R+
Sbjct: 503 --TASIAKNIVVYREENGRFTNRKELLKVAKLGPKAYEQCAGFMRIMDGKNP-------- 552
Query: 734 LLDDTRIHPESYGLAQEL 751
LD T +HPESY A++L
Sbjct: 553 -LDATGVHPESYEAAEKL 569
>gi|237743222|ref|ZP_04573703.1| transcription accessory protein [Fusobacterium sp. 7_1]
gi|229433518|gb|EEO43730.1| transcription accessory protein [Fusobacterium sp. 7_1]
Length = 722
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 169/764 (22%), Positives = 320/764 (41%), Gaps = 142/764 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y++ L E + +A +F + + ++GA + A
Sbjct: 123 PLAEKF-YTANNL-----------------EEIQNLAKDFITEEVPTVEDAIEGAMLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + +++++ + + K
Sbjct: 165 QNISEKAEYRERIREIYLKYSIIESKASKKATELDEKKVYNDYYEYS-------EKVEKM 217
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD--CKEHYLSDGVSKSAQLWNDQRELI 398
+ L + + E+E +L V ++L EDS + + +E +D V + I
Sbjct: 218 PSHRILALNRGEKEDILTVHLRL-EDSDRERIENMILREFPKNDLVETYKE--------I 268
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEA 457
+KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 269 IKDSLDRLIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRT 328
Query: 458 APRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF 516
+V +G + T F ++++ N R Q ++ + LK
Sbjct: 329 GCKVAVIDKYGFYRENTVFFLVEAM----------------HNPRQIQDARD---KFLKL 369
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ + +V +G S + + + + +++E +V + + +E+ +Y
Sbjct: 370 VKKYDIDIVSIGN---GTASRETETF--VANIIKEEKLNVKY-------LIVNEAGASVY 417
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFL 632
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 418 SASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL 477
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 478 ---------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGN 523
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ +
Sbjct: 524 FKNRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAIL 574
Query: 753 KEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETLYLIR 810
+ I DL + L +A E LK++ K+ EN ET+ +
Sbjct: 575 GK-----IGFDLEKYNNELNVAREK-------LKSF----DYKKFAEENNFGLETVKDVH 618
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGL 870
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 619 EALLKDRRDPRDDFEKPLLKSDILNI-----DNLQVGMELEGTVRNVVKFGAFIDIGLKN 673
Query: 871 AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 674 DALLHVSEISDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 716
>gi|256846632|ref|ZP_05552088.1| transcriptional accessory protein [Fusobacterium sp. 3_1_36A2]
gi|256717852|gb|EEU31409.1| transcriptional accessory protein [Fusobacterium sp. 3_1_36A2]
Length = 721
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 168/765 (21%), Positives = 318/765 (41%), Gaps = 144/765 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 81 KLTEELRSSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 123
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF +S +LE++ + +A +F + + ++GA + A
Sbjct: 124 PLAEKFYIAS-------NLEEI-----------QNLAKDFITEEVPTVEDAIEGAMLIIA 165
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + +++++ + + K
Sbjct: 166 QNISEKAEYRERIREIYLKYSIIESKASKKAAELDEKKVYNDYYEYS-------EKVEKM 218
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD--CKEHYLSDGVSKSAQLWNDQRELI 398
+ L + + E+E +L V ++L EDS + + KE +D V + I
Sbjct: 219 LSHRILALNRGEKEDILTVHLRL-EDSDRERIENMILKEFPKNDLVVTYKE--------I 269
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEA 457
+KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 270 IKDSLDRLIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRT 329
Query: 458 APRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF 516
+V +G K T F ++++ N R Q ++ + LK
Sbjct: 330 GCKVAVIDKYGFYKENTVFFLVEAM----------------HNPRQIQDARD---KFLKL 370
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ + +V +G S + + + + ++ E +V + + +E+ +Y
Sbjct: 371 VKKYDIDIVSIGN---GTASRETETF--VANIIREEKLNVKY-------LIVNEAGASVY 418
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFL 632
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 419 SASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL 478
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 479 ---------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGN 524
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK + G+G K + GFL V G+ ++LD+T IHPESYG+A+ +
Sbjct: 525 FKNRKQILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAIL 575
Query: 753 KEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETLYLI 809
++ +N +E D D+ + L K+ EN ET+ +
Sbjct: 576 GKIGFN-----------------LEKYNDELDIAREKLKSFDYKKFAEENSFGLETVKDV 618
Query: 810 RRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESG 869
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 619 YEALLKDRRDPRDDFEKPLLKSDILNI-----DNLQVGMELEGTVRNVVKFGAFIDIGLK 673
Query: 870 LAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 674 NDALLHVSEISDKYIDDP-SKVLSVGQIIKIKIKDVDKDRGRVGL 717
>gi|291523999|emb|CBK89586.1| Transcriptional accessory protein [Eubacterium rectale DSM 17629]
Length = 786
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 156/701 (22%), Positives = 284/701 (40%), Gaps = 161/701 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N F+R L+ L K+
Sbjct: 31 IPFIARYRKEATGSLNDEVLRNL--------FDRLTYLRN---------------LEDKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ L S EE+ + L D + K++ A+T+ VDD L+ P
Sbjct: 68 QTVLASI-----EEQGK-------------LTDELKKAILEAQTQVAVDD------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A + + K D +D
Sbjct: 104 -----------YRPKRRTRATIAKEKGLEPLAQTILAQESSVDIMAEAAKYVDAEKD--- 149
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
A L GA+ + A +S R +R + M ++ST P
Sbjct: 150 -------------VADEAAALAGAKDIIAENVSDNAGYRTKIRELTMQKGRLISTAKDPK 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + +++F ++ L K + L I + E+EK+L V I+ P + + K
Sbjct: 197 AESVYEMYYEF-------DEALSKVAGHRTLAINRGEKEKILTVKIEAPTEDIIKYLK-- 247
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
K+ +DG +A L +++DA D + P++ +E R+ ++ A+ + +GK L
Sbjct: 248 KQVITNDGAPTAAVLTE-----VVEDAYDRLIAPAIEREIRNNLTEEAEDGAIKVFGKNL 302
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGC 492
+ P A VL W P + ++D +G+V+D V++
Sbjct: 303 EQLLMQPPI------------AGQVVLG--WDPAFRTGCKISVVDPTGKVLDTTVIYPTA 348
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
Q+K + + ++K ++D HV ++ N + + + ++I ++++E
Sbjct: 349 ----------PQNKVEEAKAVIKKLIDKH-HVTLISLGNGTASRESE---QVIVELLKEI 394
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
P V + + +E+ +Y S++++++ P + A ++ R LQ+PLA +
Sbjct: 395 PVKVQY-------IIVNEAGASVYSASKLATEEFPNFDVGQRSATSMARRLQDPLAELVK 447
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ L L G++E D N+VG+D+N A +
Sbjct: 448 IDPKSIGVGQYQHDMNQKKLSEALG-----GVVE----DCVNKVGVDLNTA-----SVSL 493
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L++ISG+ A ++ G +R + LG K F GF+R+
Sbjct: 494 LEYISGISKTIAKNIVDYREENGKFTSRSQLLKVAKLGPKAFEQCAGFMRI--------- 544
Query: 729 SQFIDLLDDTRIHPESYGLAQEL-------AKEVYNRDIEG 762
S + LD T +HPESY + + ++V NR++ G
Sbjct: 545 SDGKNPLDATGVHPESYDATKAVLEKLGYTMEDVKNRNVVG 585
>gi|336401822|ref|ZP_08582579.1| hypothetical protein HMPREF0404_01870 [Fusobacterium sp. 21_1A]
gi|336160420|gb|EGN63468.1| hypothetical protein HMPREF0404_01870 [Fusobacterium sp. 21_1A]
Length = 760
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 169/764 (22%), Positives = 321/764 (42%), Gaps = 142/764 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 118 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 160
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y++ L E + +A +F + + ++GA + A
Sbjct: 161 PLAEKF-YTTNNL-----------------EEIQNLAKDFITEEVPTVEDAIEGAMLIIA 202
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + +++++ + + K
Sbjct: 203 QNISEKAEYRERIREIYLKYSIIESKASKKAAELDEKKVYNDYYEYS-------EKVEKM 255
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD--CKEHYLSDGVSKSAQLWNDQRELI 398
+ L + + E+E +L V ++L EDS + + +E +D V + I
Sbjct: 256 PSHRILALNRGEKEDILTVHLRL-EDSDRERIENMILREFPKNDLVETYKE--------I 306
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEA 457
+KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 307 IKDSLDRLIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRT 366
Query: 458 APRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF 516
+V +G + T F ++++ N R Q + ++ LK
Sbjct: 367 GCKVAVIDKYGFYRENTVFFLVEAM----------------HNPRQIQDAR---DKFLKL 407
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ + +V +G N + + ++ + +++E +V + + +E+ +Y
Sbjct: 408 VKKYDIDIVSIG--NGTASRETENF---VANIIKEEKLNVKY-------LIVNEAGASVY 455
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFL 632
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 456 SASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL 515
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 516 ---------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGN 561
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ +
Sbjct: 562 FKNRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAIL 612
Query: 753 KEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETLYLIR 810
+ I DL + L +A E LK++ K+ EN ET+ +
Sbjct: 613 GK-----IGFDLEKYNNELNVAREK-------LKSF----DYKKFAEENNFGLETVKDVH 656
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGL 870
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 657 EALLKDRRDPRDDFEKPLLKSDILNI-----DNLQVGMELEGTVRNVVKFGAFIDIGLKN 711
Query: 871 AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 712 DALLHVSEISDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 754
>gi|291528539|emb|CBK94125.1| Transcriptional accessory protein [Eubacterium rectale M104/1]
Length = 786
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 156/701 (22%), Positives = 284/701 (40%), Gaps = 161/701 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N F+R L+ L K+
Sbjct: 31 IPFIARYRKEATGSLNDEVLRNL--------FDRLTYLRN---------------LEDKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ L S EE+ + L D + K++ A+T+ VDD L+ P
Sbjct: 68 QTVLSSI-----EEQGK-------------LTDELKKAILEAQTQVAVDD------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A + + K D +D
Sbjct: 104 -----------YRPKRRTRATIAKEKGLEPLAQTILAQESSVDIMAEAAKYVDAEKD--- 149
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
A L GA+ + A +S R +R + M ++ST P
Sbjct: 150 -------------VADEAAALAGAKDIIAENVSDNAGYRTKIRELTMQKGRLISTAKDPK 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + +++F ++ L K + L I + E+EK+L V I+ P + + K
Sbjct: 197 AESVYEMYYEF-------DEALSKVAGHRTLAINRGEKEKILTVKIEAPTEDIIKYLK-- 247
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
K+ +DG +A L +++DA D + P++ +E R+ ++ A+ + +GK L
Sbjct: 248 KQVITNDGAPTAAVLTE-----VVEDAYDRLIAPAIEREIRNNLTEEAEDGAIKVFGKNL 302
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGC 492
+ P A VL W P + ++D +G+V+D V++
Sbjct: 303 EQLLMQPPI------------AGQVVLG--WDPAFRTGCKISVVDPTGKVLDSTVIYPTA 348
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
Q+K + + ++K ++D HV ++ N + + + ++I ++++E
Sbjct: 349 ----------PQNKVEEAKAVIKKLIDKH-HVTLISLGNGTASRESE---QVIVELLKEI 394
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
P V + + +E+ +Y S++++++ P + A ++ R LQ+PLA +
Sbjct: 395 PVKVQY-------IIVNEAGASVYSASKLATEEFPNFDVGQRSATSMARRLQDPLAELVK 447
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ L L G++E D N+VG+D+N A +
Sbjct: 448 IDPKSIGVGQYQHDMNQKKLSEALG-----GVVE----DCVNKVGVDLNTA-----SVSL 493
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L++ISG+ A ++ G +R + LG K F GF+R+
Sbjct: 494 LEYISGISKTIAKNIVDYREENGKFTSRSQLLKVAKLGPKAFEQCAGFMRI--------- 544
Query: 729 SQFIDLLDDTRIHPESYGLAQEL-------AKEVYNRDIEG 762
S + LD T +HPESY + + ++V NR++ G
Sbjct: 545 SDGKNPLDATGVHPESYDATKAVLEKLGYTMEDVKNRNVVG 585
>gi|363892460|ref|ZP_09319627.1| competence protein ComEA helix-hairpin-helix repeat region
[Eubacteriaceae bacterium CM2]
gi|361964066|gb|EHL17119.1| competence protein ComEA helix-hairpin-helix repeat region
[Eubacteriaceae bacterium CM2]
Length = 714
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 165/760 (21%), Positives = 321/760 (42%), Gaps = 140/760 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
++ ++I SLE A T +EV+D+ + P +K+ KR T+ S + GL
Sbjct: 79 KMTENIRLSLENAMTLQEVEDI-------YAP---------FKQKKR-TRASVAKEKGLE 121
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
++ Q+ L+ +EK+ D ++ EE+ NS + + GA + A
Sbjct: 122 PLS--------QILLE-GIEKIEDRADEF--INEELE-------VNSKKDAIAGAMDIVA 163
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGD-----SAIDSFHQFAGVKWLREKPLRKF 340
I+ + ++K +R + D AV+ T + S + +F+ + K
Sbjct: 164 EIIADDFELKKQLRKLLFDTAVIMTSAKKGAEEKEDFSVYKMYMEFSEIS-------SKM 216
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK 400
+ L I + E++ +L+V I + K ++ Y+ +++ D +
Sbjct: 217 PSYRILAINRGEKDDILKVKI---DYDFEKFLETAQKSYIK------SEIHEDIMTDTIT 267
Query: 401 DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPR 460
D+L +LPS+ +E RS M+ RA+ + +G+ L + P + K
Sbjct: 268 DSLKRLMLPSLERELRSEMTSRAEEKAIAVFGENLSALLMQSPLKNK------------- 314
Query: 461 VLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
+ W P + ++D +G+V+D T QN ++ SK+ + +
Sbjct: 315 -VVLGWDPAYRTGCKIAVVDETGKVLDT--TTVYPTMPQNKVEETSKE-----ITSLINK 366
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
++ +++ +G S S E+ D+ MD + E+ +Y S
Sbjct: 367 YKVNIISIGNGTASRES-------------EQIVADIVKGMDNVYYTIVSEAGASVYSAS 413
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
++ ++L +++ AV++ R +Q+P++ + + E S + ++ +
Sbjct: 414 KLGEEELKDMNVSLRGAVSIARRIQDPMSELVKI-----EPKSIGVGQYQHDVNQKRLSE 468
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
++ V+ D N+VG+D+N A ++ L++ISG+ P A ++ + +G R +
Sbjct: 469 VLSNVVEDNVNKVGVDLNTA-----SYSILEYISGITPSIAKNIVKYRDTSGKFKNRDEL 523
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD 759
+ LG+ F GFLRV+ S +LLD+T IHPE+Y +L E+ + D
Sbjct: 524 LKVSRLGQSCFEQCAGFLRVKESD---------NLLDNTGIHPEAYEKTYKLL-EILDVD 573
Query: 760 IEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRE----TLYLIRRELIH 815
I+ E I++ ++ D +K +K E TL I +EL
Sbjct: 574 IQS---------ENFIKNFTEKID---------KFSQKDLADKLEIGMPTLIDIIKELKK 615
Query: 816 GFQDWRNQYK-EPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
D R++ P + + ED L+EG +++ TVR V A + G++
Sbjct: 616 PGLDIRDEKNISPVLRSDVLKL----ED-LSEGMILKGTVRNVLEFGAFVDIGVKNDGLV 670
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
SD + + + D + GD++ K+ I +R +V L
Sbjct: 671 HISQLSDKYIKNPM-DVVSIGDVINVKVIGIDYDRKKVSL 709
>gi|118580106|ref|YP_901356.1| RNA-binding S1 domain-containing protein [Pelobacter propionicus
DSM 2379]
gi|118502816|gb|ABK99298.1| RNA binding S1 domain protein [Pelobacter propionicus DSM 2379]
Length = 723
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 168/762 (22%), Positives = 308/762 (40%), Gaps = 134/762 (17%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + +EA+ + EV+D+ L F +PKR TK + GL
Sbjct: 87 KLTPELRQRIEASSKKTEVEDLYLPF-----------------KPKRRTKAIIARERGLE 129
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFN--SSQAVLQGARHM 283
+A G +PEE A F + A L+GA H+
Sbjct: 130 PLADIMAAQELFSG-----------------SPEEAAVPFVNPELEIPDAAAALEGAGHI 172
Query: 284 AAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA 343
A +S + R VR + + V+ + D + F + + ++ LR+
Sbjct: 173 LAERLSDDADSRDMVRRLTAEQGVIVSRVAADKKGQVTKFEMY----YDYQESLREVPSH 228
Query: 344 QWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
+ L +++ E+E++L ++I P++ + K + + ++ E +++DA
Sbjct: 229 RMLAMRRGEKEEVLYLSIVAPQE---HILVGLKSRLI-----RGESVFRPLLERVVEDAY 280
Query: 404 DNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLA 463
+ PS+ E R RA + + + L N + P K RVL
Sbjct: 281 KRLIAPSIEVELRLDSKERADEAAIAVFAQNLRNLLLAPPAGGK------------RVLG 328
Query: 464 CCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQP 522
PG + + LD++G ++ + + + R Q+++ LL+ +
Sbjct: 329 I--DPGFRTGSKLAALDATGRFMEHV---TIYPHTGEARIHQARQE----LLRLVETFDI 379
Query: 523 HVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRIS 582
++ +G + T+ ++ EI + E G ++ +S+ E+ +Y S I+
Sbjct: 380 EMIAVG----NGTAGRE--MEIFSR---ETLAGAGWQIPVVSV---SEAGASVYSASEIA 427
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKY 638
++ P V+ A+++GR LQ+PL + + G G+ L+ L
Sbjct: 428 REEFPELDLTVRGAISIGRRLQDPLGELVKIDPKSIGVGQYQHDVNQSMLKKALD----- 482
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
G++E + N VG+D+N A W A L ++SGLGP A ++ R + G +R
Sbjct: 483 GVVESCV----NYVGVDLNTA---SW--ALLSYVSGLGPSLAKAVTRYRDQNGPFSSRTT 533
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
+ G K F A GFL++R +G LD++ +HPE Y L + +A++
Sbjct: 534 LMNVPRFGAKAFEQAAGFLKIRNAGHP---------LDNSAVHPERYALVESMARD---- 580
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
L +++ H+ P L K R++ + TL I EL+ +
Sbjct: 581 ------------LGVSLGHLVADPALTKRIDPKRYLSDGV---GLPTLNDILEELMKPGR 625
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
D R+Q+ Q EF + ED L EG V+Q V V A + G++
Sbjct: 626 DPRSQF----QTAEFRDDIRKIED-LREGMVLQGVVTNVTAFGAFVDIGVHQDGLVHISH 680
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
++ + S D + G ++ K+ S R ++ L RE+E
Sbjct: 681 LANRFVKSP-HDAVQAGQLVRVKVLSADPKRKRISLSIREAE 721
>gi|366163165|ref|ZP_09462920.1| RNA binding S1 [Acetivibrio cellulolyticus CD2]
Length = 718
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 191/859 (22%), Positives = 356/859 (41%), Gaps = 191/859 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE + + ND +VL ++D + + L+ R
Sbjct: 32 IPFIARYRKE-------------MTGELND-----------QVLRELYD---RLIYLRNR 64
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ R EE R I ++ +L D I+ L A +E++D+ F
Sbjct: 65 EA--------RREEVLRLIAEQGKLT------DEIAAKLNKAVALQEIEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A + +S E K G
Sbjct: 106 ------------RPKRRTRATIAKEKGLEPLA-QILFSQEL--------KSG-------- 136
Query: 257 TPEEMASNFKCA--MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
+ EE+A+ F A N+ + L GA + A ++S RK +R +F + +
Sbjct: 137 SIEEIAAPFIDAEKAVNTVEDALNGAMDIIAEDVSDNAEFRKAIREMFFKLGTIVSKSKK 196
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK-LFS 373
+ DS ++ F+ +P+ K + + L I + E+E+ LQV I +P + + L +
Sbjct: 197 EEDSVYRMYYDFS-------EPVAKIANHRILAINRGEKEEFLQVKIDVPSERVTSYLKA 249
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+C + K + ++ E ++D+ + + PS+ +E R+ ++ A+ + +
Sbjct: 250 NC--------IKKIRSITSEYVERAIEDSYERLIFPSVEREVRNELTDNAQEQAMKVFAA 301
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVD--VLFTG 491
L N + P + K + + A R C G ++D +G+V++ V++
Sbjct: 302 NLKNLLLQPPVKDK---VVLGLDPAYRT-GCKIG---------VVDETGKVLETTVIYPT 348
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
QSK + ++++K +++ H +V +G S + +I+ V
Sbjct: 349 ----------PPQSKVEEAKKVMKHLIEKHNVDIVSIGN---GTASKESEIF------VA 389
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
+ +++G ++ + + E+ +Y S++ S++ P ++ AV++ R LQ+PLA +
Sbjct: 390 DLIKELGRKLYYMVV---SEAGASVYSASKLGSEEFPDFDVALRSAVSIARRLQDPLAEL 446
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L L G++E D N VG+D+N A
Sbjct: 447 VKIDPKAIGVGQYQHDMNQKRLGESLG-----GVVE----DCVNSVGVDLNTA-----SP 492
Query: 667 APLQFISGLGPRKAASLQRSLVR----AGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRS 722
+ L +ISG+ +S+ R++V G R++ LG K F GFLR+
Sbjct: 493 SLLSYISGIN----SSIARNIVEYRESNGKFKKREELKKVKKLGDKAFEQCAGFLRIPDG 548
Query: 723 GQAASSSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDR 781
++LD T +HPESY A +L + + Y+ D D + +E ++
Sbjct: 549 A---------NVLDSTSVHPESYSAASKLLESMGYSMD---------DVKQRKLEKLKQE 590
Query: 782 PDLLKTYLLDRHIKEKKRENKR--ETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGE 839
D + I E E TL I EL+ +D R++ +P + I
Sbjct: 591 VD-------KKGIGEIASEIGVGIPTLRDILNELLKPGRDPRDELPKPVLLTDVLDI--- 640
Query: 840 TEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILT 899
+ L G V+ TVR V A + G++ + D + S + + + GDI+
Sbjct: 641 --EDLRPGMVLTGTVRNVADFGAFVDIGVHQDGLVHISELCDRYVKSPM-EVVAVGDIVK 697
Query: 900 CKIKSIQKNRYQVFLVCRE 918
+I ++ R ++ L +E
Sbjct: 698 VRILDVEVQRKRISLSMKE 716
>gi|423137734|ref|ZP_17125377.1| competence protein ComEA helix-hairpin-helix repeat region
[Fusobacterium nucleatum subsp. animalis F0419]
gi|371959203|gb|EHO76895.1| competence protein ComEA helix-hairpin-helix repeat region
[Fusobacterium nucleatum subsp. animalis F0419]
Length = 722
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 169/764 (22%), Positives = 317/764 (41%), Gaps = 142/764 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y++ L E + +A +F + + ++GA + A
Sbjct: 123 PLAEKF-YTTNNL-----------------EEIQNLAKDFITEEVPTVEDAIEGAMLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + +++++ + + K
Sbjct: 165 QNISEKAEYRERIREIYLKYSIIESKASKKAAELDEKKVYNDYYEYS-------EKVEKM 217
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD--CKEHYLSDGVSKSAQLWNDQRELI 398
+ L + + E+E +L V ++L EDS + + +E +D V + I
Sbjct: 218 PSHRILALNRGEKEDILTVHLRL-EDSDRERIENMILREFPKNDLVETYKE--------I 268
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEA 457
+KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 269 IKDSLDRLIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRT 328
Query: 458 APRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF 516
+V +G + T F ++++ N R Q ++ + LK
Sbjct: 329 GCKVAVIDKYGFYRENTVFFLVEAM----------------HNPRQIQDARD---KFLKL 369
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ + +V +G S + + +++E +V + + +E+ +Y
Sbjct: 370 VKKYDIDIVSIGNGTASRET-----ENFVANIIKEEKLNVKY-------LIVNEAGASVY 417
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFL 632
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 418 SASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL 477
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 478 ---------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGN 523
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ +
Sbjct: 524 FKNRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAIL 574
Query: 753 KEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETLYLIR 810
I DL + L +A E LK++ K+ EN ET+ +
Sbjct: 575 GR-----IGFDLEKYNNELNVAREK-------LKSF----DYKKFAEENNFGLETVKDVH 618
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGL 870
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 619 EALLKDRRDPRDDFEKPLLKSDILNI-----DNLQVGMELEGTVRNVVKFGAFIDIGLKN 673
Query: 871 AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 674 DALLHISEISDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 716
>gi|166031537|ref|ZP_02234366.1| hypothetical protein DORFOR_01237 [Dorea formicigenerans ATCC
27755]
gi|166028514|gb|EDR47271.1| Tex-like protein N-terminal domain protein [Dorea formicigenerans
ATCC 27755]
Length = 717
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 132/562 (23%), Positives = 241/562 (42%), Gaps = 110/562 (19%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF--- 265
RPKR T+ + + GL E L + L+K KE+ EE+A +
Sbjct: 105 RPKRRTRATIAKEKGL-----------EPLSTLIMLQKT-------KESLEEVAKQYINE 146
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSAIDSFH 324
+ + N +A L+GAR + A IS E R ++R M ++S+ +S ++++
Sbjct: 147 EKGVANVQEA-LEGARDIIAENISDEADYRSWIRKQTMQKGHIISSAKDEKAESVYENYY 205
Query: 325 QFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGV 384
+F ++P+ + + L + + E+EK L V I+ P++ + + YL +
Sbjct: 206 EF-------DEPVNRLAGYRTLALNRGEKEKFLTVKIEAPQEDILR--------YLEKKI 250
Query: 385 SKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVS 440
L Q ILK+A+++ + P++ +E R ++ +A+ + +GK L +
Sbjct: 251 IHGENLSTTQ---ILKEAIEDSYKRLIAPAIEREIRGELTEKAEDGAIEVFGKNLEQLLM 307
Query: 441 VGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRS 497
P VL W P + ++D +G+VVD V++ T
Sbjct: 308 QPPI------------VGHTVLG--WDPAFRTGCKLAVVDPTGKVVDTTVIYPTAPT--- 350
Query: 498 QNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVG 557
Q + ++ L K + + ++ +G S S II +++E P+ V
Sbjct: 351 ----TPQKIQAAKDTLKKLIAKYNISLISVGNGTASRES-----EMIIVDLLKEIPQKVQ 401
Query: 558 HEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL---- 613
+ + +E+ +Y S++++++ P + A ++ R LQ+PLA + +
Sbjct: 402 Y-------IIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLAELVKIDPKS 454
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFI 672
G G+ L + L+ G++E + N+VG+D+N A APL +I
Sbjct: 455 IGVGQYQHDMNQKKLNDTLS-----GVVESCV----NRVGVDLNTA------SAPLLSYI 499
Query: 673 SGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
SG+ A ++ G TRK + LG K F GFLR++
Sbjct: 500 SGITSAIAKNIVAYREEQGRFETRKQLLKVAKLGPKAFEQCAGFLRIQNGKNP------- 552
Query: 733 DLLDDTRIHPESYGLAQELAKE 754
LD T +HPESY A++L K+
Sbjct: 553 --LDTTSVHPESYEAAEKLLKK 572
>gi|374308248|ref|YP_005054679.1| S1 RNA binding domain-containing protein [Filifactor alocis ATCC
35896]
gi|291165668|gb|EFE27716.1| S1 RNA binding domain protein [Filifactor alocis ATCC 35896]
Length = 718
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 190/848 (22%), Positives = 344/848 (40%), Gaps = 170/848 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE E++++ DF +D K L+ R
Sbjct: 31 IPFIARYRKEAT---------GEMSDEVLRDF---------------YDRLKYLRNLEDR 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K + K EE++R L I +L+ A+T EV+D+ +
Sbjct: 67 KQQV----KASIEEQNR-------------LTPEIISALQEAKTLVEVEDI-------YE 102
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
P YK+ KR T+ S + GL ++ E L LQ + + +E E
Sbjct: 103 P---------YKK-KRKTRASVAIEKGLEPLSYVIRLGEENL-LQQAQNFVNEENE---- 147
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+++ LQGA + A ++S + +K +R+I + T
Sbjct: 148 -------------VLTAEDALQGAMDIVAQQLSEDFERKKKIRNIVFSTTKIETSRKKSA 194
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ + + ++ + + + + + L I + E+E +L+V E ++ + +
Sbjct: 195 EEK-EGYLTYS-MYFEYNETAKDIPPHRILAINRGEKEDILKVKYLHEEQNIKSVLMEDI 252
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
H + D I++DAL +LPS+ +E RS M+ A+ + +G+ L
Sbjct: 253 VH---------TEHNEDCLNRIVEDALKRLILPSLERELRSTMTETAEERAIEVFGQNLK 303
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
+ + G P V W P + ++D +G+V+D T +
Sbjct: 304 DLLLQG--------------TLPNVTILGWDPAFRTGCKIAVIDCTGKVLD---TATIYP 346
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ + ++SKK +L + HQ V+ +G S S EI+ ++++E R+
Sbjct: 347 TAPQNKVEESKK----VILNLIDRHQIDVIAIGNGTASRES-----EEIVREIIKESKRE 397
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL-- 613
V H + +E+ +Y S++ +++ P +++ AV++ R L +PLA + +
Sbjct: 398 VHH-------IIVNEAGASVYSASKLGTEEFPDMNVSLRGAVSIARRLADPLAELVKISP 450
Query: 614 --CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
G G+ ++ + +++ V+ + N VG+D+N A + L +
Sbjct: 451 EHIGVGQ---------YQHDVNQGRLLEVLKGVVENAVNTVGIDLNTA-----SSSLLGY 496
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+SG+ P A ++ GA RK+ + LG F GFLR++ +
Sbjct: 497 VSGITPSIAKNIIEYRETNGAFRNRKELLKVKRLGASSFEQCAGFLRIKDGTE------- 549
Query: 732 IDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVR-DRPDLLKTYLL 790
+LD+T +HPESY A + +Y+ I D D D+ E + E + D P L
Sbjct: 550 --VLDNTLVHPESYDKAYGV---LYSLHIASD-ELDTDSAETSEEFEKIDFPQL------ 597
Query: 791 DRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
+ E TL I EL +D R P ++ ++ T D L E V+
Sbjct: 598 -----ATQLEVGIPTLKDIVSELKKPGRDIR-----PKRNPVEFLSEIMTLDDLKEDMVL 647
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY 910
TVR V A + G++ + SD + L D + GDI+T ++ I + R
Sbjct: 648 TGTVRNVLDFGAFVDIGLKSDGLVHISELSDKYVKHPL-DIVRIGDIVTVRVIKIDRERG 706
Query: 911 QVFLVCRE 918
+V L ++
Sbjct: 707 KVGLSMKQ 714
>gi|436841261|ref|YP_007325639.1| transcriptional accessory protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432170167|emb|CCO23538.1| transcriptional accessory protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 716
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 192/851 (22%), Positives = 344/851 (40%), Gaps = 173/851 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL +EV D L +++LDK+ R
Sbjct: 33 IPFISRYRKEATGSL------DEVAVSAVSDL-----------LVKLNELDKR------R 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L+S DE +L D + K + AA T R+++D L+ P
Sbjct: 70 DTILKSI-------------DE-----QGKLDDGLKKQINAAGTMRQLED------LYLP 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK PKR TK + + GL +A K ++Q DP +
Sbjct: 106 ----------YK-PKRKTKGQAAIQKGLEPLAYKL--FAQQC--------------DPIK 138
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+ S K S L GAR + A +I+ R+ VR++F AV+ + +
Sbjct: 139 EAQSFVSKEKG--VESVDDALAGARDIIAEKIAENTGTRQAVRALFERRAVIESKESKTA 196
Query: 317 DSAIDSFHQFAGVKWL--REKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
+A + W RE P + + L + + E +K L+V+I+ P++S
Sbjct: 197 QAAENKSKAAKFRDWFDWRE-PAGRAAGHRILALLRGERDKFLKVSIR-PDESEGL---- 250
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
L + +SA + Q E D+ L P M E R+ + +A++ + +
Sbjct: 251 ---DVLHRKLVRSASAASKQVEKAATDSYKRLLAPQMETELRARLLEKAETEAIKVFASN 307
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTG 491
L + P + R+LA PG + V LD+ G ++ D ++
Sbjct: 308 LREILLAPPL------------GSMRILA--LDPGFRTGAKLVCLDAQGALLHNDTIYP- 352
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
V + KK ++++ + + V +G + T+ ++ E+
Sbjct: 353 --------VTSEGRKKEAAAKVVELVEKYNIEAVAIG----NGTAGRE---------TEQ 391
Query: 552 HPRDVGHEMDE-LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
+++G +DE ++++ +ES +Y S I+ D+ P V+ AV++GR L +PLA +
Sbjct: 392 FVKELG--LDESIAVIMVNESGASVYSASEIARDEFPDHDITVRGAVSIGRRLMDPLAEL 449
Query: 611 ATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
+ + ++ + L +++V+ N VG+++N A R LQ
Sbjct: 450 VKIDPKSIGVGQYQHDVDQKALAEG-----LDRVVESCVNMVGVELNTASAR-----LLQ 499
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
+SGLGP AA++ + G +RK + LG K F GFLR+R +
Sbjct: 500 SVSGLGPVLAANVIKFRDENGPFASRKALLKVPRLGPKAFEQCAGFLRIRSAKNP----- 554
Query: 731 FIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
LD T +HPE Y +++A ++L + + + +L + L
Sbjct: 555 ----LDATAVHPERYKTVEQMA----------------ESLGAKVADLINSAELRRKIKL 594
Query: 791 DRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
+ +I + + TL I +EL +D R Q++ S D+ ++ L +G V+
Sbjct: 595 EDYISD---DLGLPTLEDIMKELEKPGRDPRRQFEAVSFDDSVKEVA-----DLRDGMVL 646
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY 910
V V A + G++ +D + + ++ +H G + K+ + R
Sbjct: 647 NGVVTNVTAFGAFVDVGVHQDGLVHISRLADQFVKNP-AEVVHPGLAVKVKVLEVDLERK 705
Query: 911 QVFLVCRESEM 921
++ L RES+M
Sbjct: 706 RISLSMRESDM 716
>gi|51894064|ref|YP_076755.1| 30S ribosomal protein S1 [Symbiobacterium thermophilum IAM 14863]
gi|51857753|dbj|BAD41911.1| ribosomal protein S1-like RNA-binding domain [Symbiobacterium
thermophilum IAM 14863]
Length = 764
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 118/565 (20%), Positives = 239/565 (42%), Gaps = 113/565 (20%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + GL +A + +E G +PE++A+ +
Sbjct: 108 RPKRRTRAMIARERGLEPLAQQMLAQAETAG-----------------SPEQIAATYVNP 150
Query: 269 MFN--SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT----PDGDSAIDS 322
S++ L GAR + A +S + VRK R + V+ + + P+ +
Sbjct: 151 ELGVASAEEALAGARDIVAEIVSDDAAVRKMARELTFARGVIRSAASDKGEPEKAREFEM 210
Query: 323 FHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSD 382
+ F ++P+R + L + + E + L+VT++ PE+ ++ + + Y++
Sbjct: 211 YFDF-------QEPVRTLPPHRVLALNRGERLECLKVTLEAPEE---EIIARIERQYVT- 259
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
+W + + DA + PS+ E R+ ++ +A+ + + L N +
Sbjct: 260 ----GRSIWENHLREAIADAYRRLIAPSIETEIRNEITEKAEEHAIRLFAMNLRNLLLQP 315
Query: 443 PYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVR 501
P + + PG + ++D +G V++ TG + +
Sbjct: 316 PIKG--------------MTVMGIDPGYRTGCKVAVVDETGRVLE---TGVIYV----TL 354
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
++ ++ +E L++ + H+ ++ +G N + + + + I HP
Sbjct: 355 GERQRQQGEEVLVRLVDKHKVDLIAIG--NGTASRETEQVVASIIPRCS-HP-------- 403
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
+ + E+ +Y S+++ ++ P ++ AV++ R Q+PLA + + G G
Sbjct: 404 -TAYMIVSEAGASVYSASKVAQEEFPDFDVTLRSAVSIARRAQDPLAELVKIDPKSIGVG 462
Query: 618 ---REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
++ +L E+ G V+ V N VG+D+N A + LQ+++G
Sbjct: 463 LYQHDVNQRRLA---------EQLGA---VVESVVNAVGVDLNTA-----SPSLLQYVAG 505
Query: 675 LGPRKAASLQRSLV----RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
+ AS+ R++V + G +R++ + GLG K F GFLRV +
Sbjct: 506 I----KASVARAIVEYREKHGKFRSRRELLKVSGLGPKAFEQCAGFLRV---------TD 552
Query: 731 FIDLLDDTRIHPESYGLAQELAKEV 755
++ LD+T +HPESY LA+ + K V
Sbjct: 553 GVEPLDNTAVHPESYALAEAILKAV 577
>gi|332667406|ref|YP_004450194.1| Tex-like protein [Haliscomenobacter hydrossis DSM 1100]
gi|332336220|gb|AEE53321.1| Tex-like protein [Haliscomenobacter hydrossis DSM 1100]
Length = 710
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 149/626 (23%), Positives = 262/626 (41%), Gaps = 103/626 (16%)
Query: 144 YKKRYEEESRRIYDETRLALNQ---QLFDSISKSLEA-----AETEREVDDVDLKFNLHF 195
+ RY +E+ DE ++A Q + FD + K E+ AE + DD+ + +
Sbjct: 36 FIARYRKEATGELDEVQIADIQREHKKFDELEKRKESVLGSIAEQGKLTDDLRKRIENCY 95
Query: 196 PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
P E+ YKR K+ T+ S + GL E L L+L ++ D+
Sbjct: 96 NPTELEDIYLPYKR-KKKTRASVAREKGL-----------EPLALRLFEQRDTDD----- 138
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT-- 313
PE +A + S + L GAR + A IS R +R +F +++ +
Sbjct: 139 --PEILAGKYLTDDVPSVEDALAGARDIIAEMISESEEARNLLRRVFSKTSIIQSKVARG 196
Query: 314 --PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
+GD D F F+ V L K + L +++ EEE L+V I +PED +
Sbjct: 197 KEKEGDKYKDYF-DFSEV-------LSKCPSHRLLAMRRGEEEGFLRVLI-VPEDEEDAK 247
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
F K G S +Q + + D+ + L PS+ E R+L +A + +
Sbjct: 248 FQLDKRFLKGFGASA------EQVKAAIHDSYERLLAPSIETEFRNLSKDKADKEAIDVF 301
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFT 490
+ L + P +K RV+ PG + V+LD +G +V+ L
Sbjct: 302 TQNLRQLLLAAPLGQK------------RVMG--LDPGFRTGCKLVVLDDNGNLVENL-- 345
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
+ QS + + + F++D H + +G ++ D I FK
Sbjct: 346 ------AIYPHPPQSDEAGATKTIAFLVDKHGIDAIAVGNGTAGRETM-DLCRRIKFK-- 396
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
H ++ + +E+ +Y S ++ ++ P V+ AV++GR L +PLA
Sbjct: 397 --------HSVEVFMV---NEAGASIYSASDVAREEFPDYDVTVRGAVSIGRRLMDPLAE 445
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
+ + + S + ++ + + ++QV+ N VG+++N A L
Sbjct: 446 LVKI-----DPKSIGVGQYQHDVNQSQLKESLDQVVESCVNSVGVNLNTASKH-----LL 495
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
++SGLGP A ++ + GA TR + LG K F GFLR+R +
Sbjct: 496 TYVSGLGPVIAKNIVEYRAQNGAFNTRSELKKVARLGDKAFEQCAGFLRIRGAKNP---- 551
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEV 755
LD+T +HPE+Y + +++AK++
Sbjct: 552 -----LDNTAVHPETYPIVEQMAKDL 572
>gi|294783859|ref|ZP_06749181.1| S1 RNA binding domain protein [Fusobacterium sp. 1_1_41FAA]
gi|294479671|gb|EFG27450.1| S1 RNA binding domain protein [Fusobacterium sp. 1_1_41FAA]
Length = 722
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 163/773 (21%), Positives = 327/773 (42%), Gaps = 152/773 (19%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L D + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTDELRNSIVEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y++ L E + +A +F + + ++GA + A
Sbjct: 123 PLAEKF-YTANNL-----------------EEIQNLAKDFITEEVPTVEDAIEGAMLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ ++++ + D + +++++ + + K
Sbjct: 165 QNISEKAEYRERIREIYLKSSIIEAKASKKAVELDEKKVYNDYYEYS-------EKIEKM 217
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC-KEHYLSDGVSKSAQLWNDQRELIL 399
+ L + + E+E +L V ++L + K+ + KE +D V+ + I+
Sbjct: 218 ASHRILAVNRGEKEDILTVHLRLEDSDREKIENMILKEFPKNDLVATYKE--------II 269
Query: 400 KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEAA 458
KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 270 KDSLDRLIIPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRTG 329
Query: 459 PRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFM 517
+V +G + T F ++++ + + + ++ +++ L +
Sbjct: 330 CKVAVIDKYGFYRENTVFFLVEA-------------------MHNPKQIEDAKKKFLALV 370
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
++ +V +G S + + + + +++E+ ++ + + +E+ +Y
Sbjct: 371 KKYEIDIVSIGN---GTASRETETF--VANIIKENKLNLKY-------LIVNEAGASVYS 418
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLT 633
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 419 ASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL- 477
Query: 634 PDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAI 693
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 478 --------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVEYRKENGNF 524
Query: 694 FTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
RK+ + G+G K + GFL V G+ ++LD+T IHPESY +A+ L +
Sbjct: 525 KNRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYAIAEALLE 575
Query: 754 EV------YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RET 805
++ YN +LN+ R+R LK++ K+ EN ET
Sbjct: 576 KIGFSLEKYN----NELNE-----------ARER---LKSF----DYKKFAEENNFGAET 613
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV 865
+ + L+ +D R+ +++P + I D L G ++ TVR V A
Sbjct: 614 VKDVYEALLKDRRDPRDDFEKPLLKSDILNI-----DNLEVGMELEGTVRNVVKFGAFVD 668
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
+ +L + S+ + D S L G I+ +IK + K+R +V L +E
Sbjct: 669 IGLKNDALLHISEISNKYIDDP-SKVLAVGQIIKVRIKDVDKDRGRVGLTKKE 720
>gi|28210090|ref|NP_781034.1| transcription accessory protein [Clostridium tetani E88]
gi|28202526|gb|AAO34971.1| transcription accessory protein [Clostridium tetani E88]
Length = 718
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 165/678 (24%), Positives = 282/678 (41%), Gaps = 138/678 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE L DL E+ F+R L + +L+ K
Sbjct: 32 IPFIARYRKE-VTGGLTDLTLREL-------FQR---------LTYLRNLNGK------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+E+ RI DE +L + + S+ ET EV+D+ F
Sbjct: 68 ------------KEDVMRIIDE-----QGKLTEDLKSSILKCETLTEVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A L +G+ ED KE
Sbjct: 106 ------------RPKRRTRATIAEEKGLKPLAE--------------LILLGEFKEDLKE 139
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+ +N K NSS+ L GA + + IS + RK++RS ++ T
Sbjct: 140 EAGKYINNEK--EVNSSEEALAGAVDIISEIISDKAEYRKWIRSFVNKEGLIETSGESKE 197
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ + ++ + RE+ ++K + L I + E+EK+L V I + K+
Sbjct: 198 PTPYEMYYSY------REE-VKKIPSHRILAINRGEKEKILSVKITC---DMGKI----- 242
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
E YL + K + + E + D+L + PS+ +E R ++ RA+ + + L
Sbjct: 243 EIYLKSNLLKDNNITDKYIEESVSDSLKRLIYPSIEREIRGDLTDRAEKGAIDIFKSNLK 302
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
+ P + K + PG + +LD +G+ +D T T
Sbjct: 303 ALLMQPPIKGKT--------------VLGYDPGFRTGCKIAVLDDTGKFLDK-STVYATA 347
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+V + S K +E + K+ +D V+ LG S S E+I ++++E
Sbjct: 348 PQNDV--EGSIKALKELIYKYDVD----VISLGNGTASRES-----EEVIGRLIKEIKE- 395
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
+ E+ V E+ +Y S +++++ P +++ A+++GR LQ+PLA + +
Sbjct: 396 --EKGKEVYYVIVSEAGASVYSASELATEEYPDIDVSIRGAISIGRRLQDPLAELVKI-D 452
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
P S + ++ +TP + + V+ D N VG+D+N A + L ++SG+
Sbjct: 453 PK----SIGVGQYQHDITPKKLDESLRGVVEDCVNNVGVDLNTATP-----SLLAYVSGI 503
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ G +RK+ + LG K F GFLRV S + LL
Sbjct: 504 NSGIAKNIVAYREEKGKFTSRKELLKVKRLGAKAFEQCAGFLRVSESKE---------LL 554
Query: 736 DDTRIHPESYGLAQELAK 753
D+T +HPESY + +EL K
Sbjct: 555 DNTGVHPESYKVTKELIK 572
>gi|269115294|ref|YP_003303057.1| hypothetical protein MHO_5200 [Mycoplasma hominis ATCC 23114]
gi|268322919|emb|CAX37654.1| Conserved hypothetical protein, putative RNAbinding protein
[Mycoplasma hominis ATCC 23114]
Length = 717
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 183/863 (21%), Positives = 359/863 (41%), Gaps = 169/863 (19%)
Query: 56 LSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLK 115
L++S + + L LL + +PFI+ YRK ++ L+++++ N+
Sbjct: 11 LNLSENQVKNTLSLLS-EGATVPFISRYRK----NITGGLDEDQITKIND---------- 55
Query: 116 WHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSL 175
++D++ L KRK A+ + LA N+ L D + + +
Sbjct: 56 -----LYVYDVE-----LNKRKEAILNI-----------------LAENKLLNDELKQKI 88
Query: 176 EAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSS 235
EAA+T++ V+++ + P ++G + TK S GL +A + ++
Sbjct: 89 EAADTKQAVENI-------YEPFKIG----------KKTKASDAIALGLSPLADEILNNN 131
Query: 236 EQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR 295
+ K + D +T +E VLQ + + A IS +P R
Sbjct: 132 DDNYNLYYAAK--KYISDKLKTEDE---------------VLQQTKFIIAQNISQDPSTR 174
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEK 355
+YV++ D V+ T + ++F Q+ + + K + + L I + E++K
Sbjct: 175 EYVKNQLWDYGVIETKLKRNAIDENETFKQYYNF----SERVNKIPNHRILAISRGEDKK 230
Query: 356 LLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
+L I + K+ D + Y KS + +E IL DALD ++PS+++E
Sbjct: 231 ILSYDITY---NGKKIIYDLNQKYF-----KSKRTAKCIQECIL-DALDRLIIPSIIREI 281
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTF 475
++ + RA++ + + + ++ + P + + D P + C
Sbjct: 282 KTELFERAEAEAIKVFASNV-EQMLLSPATKNKRILAID----PAYVNGC--------KI 328
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG--AVNLS 533
+D +G + L G + + N Q+ + KF+ +++ ++V+G +
Sbjct: 329 AAIDQNG---NFLKEGIIYPHNHN---QEQWFEAINTINKFIDEYKIDLIVIGNGTASRE 382
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S D + + K +E++P HE + IV E +Y S+I+ ++ P
Sbjct: 383 TESFIDKLLQ---KRLEKNP----HEKIKFVIV--SEVGASVYSASKIAQEEFPQLHVEY 433
Query: 594 KRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVG 653
+ A+ +GR Q+PL + + P S + ++ + E + + + V N VG
Sbjct: 434 RSAIHIGRKFQDPLNELIKI-DPK----SIGIGQYQHDVNQKELSKQLTEKLNKVVNLVG 488
Query: 654 LDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNA 713
+D+N A L +ISGL A+++ G+ +R++ GLG K + +
Sbjct: 489 VDLNTATK-----VILSYISGLSNTIASNIVNYREENGSFKSREELKKVKGLGPKAYEQS 543
Query: 714 VGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM 773
VGFLR+ S + D T IHPESY LA + + + DLN+
Sbjct: 544 VGFLRIHDSN---------NFYDKTNIHPESYKLADTIVNK-----LNIDLNN------- 582
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEF 833
D+ LL +D+ K+ + + ++ LI LI +D R+ D+
Sbjct: 583 -----IDKEKLLS---VDKEQLAKELNSDKYSIQLIIESLIAPEKDIRD-------DKPG 627
Query: 834 YMISGE--TEDTLAEGRVVQATVRRVQ--GQRAICVLESGLAGMLMKEDYSDDWRDSELS 889
+++S + T D + +G++++ ++ V G A L+ + + ++
Sbjct: 628 FLVSDKVLTIDDITQGQIIKGQIQNVTDFGAFAFIGLKQNVLIHITNMKKKENQFIKHPL 687
Query: 890 DKLHEGDILTCKIKSIQKNRYQV 912
D L+ GD + +I SI K ++
Sbjct: 688 DVLNVGDNVNIQIISIDKEHNKI 710
>gi|407472790|ref|YP_006787190.1| RNA-binding S1 domain-containing protein [Clostridium acidurici 9a]
gi|407049298|gb|AFS77343.1| RNA-binding S1 domain-containing protein [Clostridium acidurici 9a]
Length = 718
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 156/695 (22%), Positives = 295/695 (42%), Gaps = 153/695 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE+ L D+ E+ +ER L+ L+ R
Sbjct: 31 IPFIARYRKEQT-GELSDVVLREL-------YERLIYLRN----------------LESR 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K EE R+ +E +L + + K + +A T +++DD+ F
Sbjct: 67 K------------EEVIRLIEE-----QGKLTEELKKDIWSANTLQKIDDLYRPF----- 104
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A S G D K+
Sbjct: 105 ------------RPKRRTRATIAKEKGLEPLADIILDQSLTEG-------------DIKD 139
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+ ++ K NS + L GA + A IS R+ +R+ + + + T D
Sbjct: 140 IASKYINDEKEV--NSVEDALTGAMDIIAEIISDNAGYRETIRNRLYNKSDILTQAVDDK 197
Query: 317 DSAI-DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI-KLPEDSLNKLFSD 374
+ ++ + +++++ +P+R + + L I + E+EK ++V I L ED ++ L S
Sbjct: 198 EKSVYEMYYEYS-------EPVRNIANHRILAINRGEKEKFIRVKIDSLDEDIVSILNSK 250
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
+ D ++ L + ++D+ + PS+ +E R++++ RA+ + +GK
Sbjct: 251 VIVN--KDAITTEYLLSS------IEDSYKRLIFPSIEREIRNILTERAEEHAIKVFGKN 302
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
L + P + K + + PG + ++D +G+++D FT
Sbjct: 303 LSPLLMQSPIKGK--------------VVMGFDPGFRTGCKVAVVDDTGKLLD--FTTVY 346
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
QN + +++KK L+ + + ++ +G S S II M++E
Sbjct: 347 PTEPQN-KVEETKK----ELINLINKYDIDMIAIGNGTASRES-----ETIIADMIKEID 396
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
+ V +IV E+ +Y S++++++ P +++ A+++ + LQ+PLA + +
Sbjct: 397 KKVY-----FTIV--SEAGASIYSASKVANEEYPDINVSIRGAISIAKRLQDPLAELVKI 449
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ L+ L G++E D N VG+D+N A + L
Sbjct: 450 DPKHVGVGQYQHDLNQGKLDETLK-----GVVE----DCVNSVGIDLNTA-----SVSLL 495
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
++SG+ P A ++ AG RK+ + LG+ + GFLR+ S
Sbjct: 496 SYVSGISPSVAKNIVSYREEAGRFKNRKELLKVKRLGQATYTQCAGFLRLADSENP---- 551
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEV-YNR-DIEG 762
LD+T +HPESY + +L +++ Y++ DI+G
Sbjct: 552 -----LDNTSVHPESYDVTLKLVEKLGYSKEDIKG 581
>gi|452993791|emb|CCQ94607.1| conserved hypothetical protein [Clostridium ultunense Esp]
Length = 699
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 219/487 (44%), Gaps = 74/487 (15%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
N+ + L+GA + A IS + R +R+I + ++ T ++ +
Sbjct: 151 VNTEEEALEGAMDIIAEIISDDAKYRDIIRNIANNKGILQTEGVEKQQKSVYEMY----- 205
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP-EDSLNKLFSDCKEHYLSDGVSKSA 388
+ ++ L+ + + L I + E+EK+L+V + LP E+ L+K+ S ++D +
Sbjct: 206 -YDYKESLKTIANHRILAINRGEKEKVLKVNLVLPNEEILSKIKSKV---IINDSIETKQ 261
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
L E ++D+ + PSM +E RS +S RA+ + + L + + P + +
Sbjct: 262 YL-----EASIEDSYKRLIFPSMEREIRSNLSERAEEEAIKVFALNL-KPLLMQPPVKGE 315
Query: 449 NDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
+ D P C ++D +G+++D +T QN D+ +KK
Sbjct: 316 TVMGID----PAFRTGC--------KVAVMDDTGKLLD--YTTVYPTEPQNQVDK-AKKE 360
Query: 509 DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG 568
++ + K+ +D + A+ S + ++ I+ M++E ++ LS +
Sbjct: 361 LKDLIFKYDVD-------IIAIGNGTASRETEM--IVAGMLQEIDKN-------LSYIIV 404
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWK 624
+E+ +Y S + ++ P +++ A+++GR LQ+PLA + + G G+
Sbjct: 405 NEAGASVYSASEVGQEEFPDLDVSIRGAISIGRRLQDPLAELVKIDPKHIGVGQ------ 458
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
++ L + +E V+ D N VG+D+N A + L+++SG+ R A +L
Sbjct: 459 ---YQHDLNQGKLNQALEGVVEDCVNTVGVDLNTA-----SPSLLRYVSGISSRVAQNLI 510
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
G R++ + GLG K F GFLR+ LD+T +HPES
Sbjct: 511 EYREEKGKFTNREELLKVKGLGPKTFTQCAGFLRIPEGNNP---------LDNTAVHPES 561
Query: 745 YGLAQEL 751
Y +A++L
Sbjct: 562 YPIAKKL 568
>gi|346309899|ref|ZP_08851964.1| hypothetical protein HMPREF9457_03673 [Dorea formicigenerans
4_6_53AFAA]
gi|345908240|gb|EGX77898.1| hypothetical protein HMPREF9457_03673 [Dorea formicigenerans
4_6_53AFAA]
Length = 717
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 132/562 (23%), Positives = 241/562 (42%), Gaps = 110/562 (19%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF--- 265
RPKR T+ + + GL E L + L+K KE+ EE+A +
Sbjct: 105 RPKRRTRATIAKEKGL-----------EPLSTLIMLQKT-------KESLEEVAKQYINE 146
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSAIDSFH 324
+ + N +A L+GAR + A IS E R ++R M ++S+ +S ++++
Sbjct: 147 EKGVANVQEA-LEGARDIIAENISDEADYRSWIRKQTMQKGHIISSAKDEKTESVYENYY 205
Query: 325 QFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGV 384
+F ++P+ + + L + + E+EK L V I+ P++ + + YL +
Sbjct: 206 EF-------DEPVNRLAGYRTLALNRGEKEKFLTVKIEAPQEDILR--------YLEKKI 250
Query: 385 SKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVS 440
L Q ILK+A+++ + P++ +E R ++ +A+ + +GK L +
Sbjct: 251 IHGENLSTTQ---ILKEAIEDSYKRLIAPAIEREIRGELTEKAEDGAIEVFGKNLEQLLM 307
Query: 441 VGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRS 497
P VL W P + ++D +G+VVD V++ T
Sbjct: 308 QPPI------------VGHTVLG--WDPAFRTGCKLAVVDPTGKVVDTTVIYPTAPT--- 350
Query: 498 QNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVG 557
Q + ++ L K + + ++ +G S S II +++E P+ V
Sbjct: 351 ----TPQKIQAAKDTLKKLIAKYNISLISVGNGTASRES-----EMIIVDLLKEIPQKVQ 401
Query: 558 HEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL---- 613
+ + +E+ +Y S++++++ P + A ++ R LQ+PLA + +
Sbjct: 402 Y-------IIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLAELVKIDPKS 454
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFI 672
G G+ L + L+ G++E + N+VG+D+N A APL +I
Sbjct: 455 IGVGQYQHDMNQKKLNDTLS-----GVVESCV----NRVGVDLNTA------SAPLLSYI 499
Query: 673 SGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
SG+ A ++ G TRK + LG K F GFLR++
Sbjct: 500 SGITSAIAKNIVAYREEQGRFETRKQLLKVAKLGPKAFEQCAGFLRIQNGKNP------- 552
Query: 733 DLLDDTRIHPESYGLAQELAKE 754
LD T +HPESY A++L K+
Sbjct: 553 --LDTTSVHPESYEAAEKLLKK 572
>gi|365132878|ref|ZP_09342439.1| competence protein ComEA helix-hairpin-helix repeat region
[Subdoligranulum sp. 4_3_54A2FAA]
gi|363616198|gb|EHL67647.1| competence protein ComEA helix-hairpin-helix repeat region
[Subdoligranulum sp. 4_3_54A2FAA]
Length = 720
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/585 (22%), Positives = 250/585 (42%), Gaps = 108/585 (18%)
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
I+ +LE A+T EV+D+ + P YK PKR T+ S GL +A++
Sbjct: 85 IAAALEKAKTLAEVEDI-------YRP---------YK-PKRKTRASIARARGLEPLAAR 127
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
LE + P++ P +A + ++A L GAR++ A S
Sbjct: 128 L------------LE------QRPEDEPALLARQYITEEVPDTEAALAGARNILAEGFSD 169
Query: 291 EPCVRKYVRSIFMDNAVV-STCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+R +RS++ A+V S D DS ++ ++ +P K + L +
Sbjct: 170 SANLRATLRSLYNATALVESKAAKKDTDSVYSGYYDYS-------EPAAKMAGHRILAVD 222
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLP 409
+ E E L+V++ + +L L++ K+ +Q +DA + P
Sbjct: 223 RGEREGFLKVSVTVDAARAVRL--------LTERTVKNDSPSAEQVRAAAEDAYVRLIHP 274
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG 469
S+ +E R+ ++ RA + + K L + P + K +A PG
Sbjct: 275 SLEREVRAGLTERACEGAISVFSKNLRQLLLQPPIKGK--------------VALGLDPG 320
Query: 470 -KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG 528
+ ++D++G+V+D T + + R +++K+ L + H ++ +G
Sbjct: 321 YRMGCKTAVVDATGKVLD---TAVIYPIPEFKRVEEAKRT----LKALIKKHGVEIIAIG 373
Query: 529 AVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD-ELSIVYGDESLPRLYENSRISSDQLP 587
+ T+ K+ E +V E+D +S + E+ +Y S++++++ P
Sbjct: 374 ----NGTAGKE---------TEIFAANVIAELDLPVSYMVVSEAGASVYSASKLAAEEFP 420
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
N++ AV++ R LQ+PLA + + + + ++ + P + ++ V+
Sbjct: 421 EYDVNLRSAVSIARRLQDPLAELVKIDPKAVGVGQY-----QHDMPPAQLSAALDGVVES 475
Query: 648 VTNQVGLDINLAIHREWQFAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLG 706
N VG+D+N A APL ++G+ A ++ + AGA TR++ + LG
Sbjct: 476 CVNTVGVDLNTA------SAPLLARVAGVTAATAKNIVKYREDAGAFKTRRELLKVPKLG 529
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
K F GFLRV + LD T +HPESYG A++L
Sbjct: 530 PKAFEQCAGFLRVPGAKNP---------LDATAVHPESYGAAEKL 565
>gi|227538263|ref|ZP_03968312.1| transcription accessory protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227241778|gb|EEI91793.1| transcription accessory protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 741
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 165/718 (22%), Positives = 278/718 (38%), Gaps = 174/718 (24%)
Query: 54 HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT 113
++LSIS + ++LL + +PFIA YRKE SL +EV
Sbjct: 5 NELSISDRQVRTTIELLD-EGATVPFIARYRKEMTGSL------DEVQ------------ 45
Query: 114 LKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLA--LNQQLFDSI 171
+ I D ++ L+KRK A+ + I ++ +L L QQ+
Sbjct: 46 ------ITTIRDRIQQLRELEKRKEAV-----------LKSITEQGKLTPELEQQIL--- 85
Query: 172 SKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKF 231
AAET ++D+ L + +PKR T+ S + GL +A +
Sbjct: 86 -----AAETMANLEDIYLPY-----------------KPKRKTRASIAREKGLQPLADQI 123
Query: 232 ----GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVE 287
G E L + L E+ G S + L GAR + A
Sbjct: 124 LLQDGKDFETLAVSLIDEEKG---------------------VQSVEDALAGARDIIAET 162
Query: 288 ISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL 347
I+ + VR R IF++ + P + A + + +W + L+ + L
Sbjct: 163 IAEDANVRARSRKIFLEKGQFVSKVVPGKEEAAQKYKDY--FEW--SESLKDAPSHRVLA 218
Query: 348 IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
+++ E+E+LL + I++ E+ + Y+ K+A Q + L D+ L
Sbjct: 219 MRRGEKEELLYLDIEVAEEEVVPAIDTL---YI-----KAANPAATQVRMALLDSYKRLL 270
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
PSM E R L RA + + + + P +K R+LA
Sbjct: 271 KPSMETEVRVLTRQRADEEAIKVFADNVRQLLLAAPLGQK------------RLLAI--D 316
Query: 468 PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
PG TGC T+ V D+Q + + PH
Sbjct: 317 PG------------------FRTGCKTV----VLDEQGTLLENTAIF-------PHTGAG 347
Query: 528 GAVNLSCTS----LKDDIYEIIF------KMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
A + T K DI I + EE R + + ++++V +ES +Y
Sbjct: 348 AAAEAAKTVGHLVKKYDIQAIAIGNGTAGRETEEFVRKLN--IQDITLVMVNESGASIYS 405
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
S + ++ P V+ AV++GR L +PLA + + + ++ +N L
Sbjct: 406 ASETAREEFPDHDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKLQ---- 461
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRK 697
++ ++ N VG+++N A + L ++SGLGP A + V GA +RK
Sbjct: 462 -TALDDTVISCVNAVGVELNTASKQ-----ILAYVSGLGPSLAQQIVNYRVANGAFKSRK 515
Query: 698 DFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ LG K F A GFLR+R + LD + +HPE Y + +++AK++
Sbjct: 516 ELKKVPRLGDKAFEQAAGFLRIRNAENP---------LDASAVHPERYSVVEKMAKDL 564
>gi|260495299|ref|ZP_05815426.1| transcriptional accessory protein [Fusobacterium sp. 3_1_33]
gi|260197077|gb|EEW94597.1| transcriptional accessory protein [Fusobacterium sp. 3_1_33]
Length = 722
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 169/764 (22%), Positives = 318/764 (41%), Gaps = 142/764 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y+ L E + +A +F + + ++GA + A
Sbjct: 123 PLAEKF-YTVNNL-----------------EEIQNLAKDFITEEVPTVEDAIEGAMLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + +++++ + + K
Sbjct: 165 QNISEKAEYRERIREIYLKYSIIESKASKKATELDEKKVYNDYYEYS-------EKVEKM 217
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD--CKEHYLSDGVSKSAQLWNDQRELI 398
+ L + + E+E +L V ++L EDS + + +E +D V + I
Sbjct: 218 PSHRILALNRGEKEDILTVHLRL-EDSDRERIENMILREFPKNDLVETYKE--------I 268
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEA 457
+KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 269 IKDSLDRLIVPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRT 328
Query: 458 APRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF 516
+V +G + T F ++++ N R Q ++ + LK
Sbjct: 329 GCKVAVIDKYGFYRENTVFFLVEAM----------------HNPRQIQDARD---KFLKL 369
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ + +V +G S + + + + +++E +V + + +E+ +Y
Sbjct: 370 VKKYDIDIVSIGN---GTASRETETF--VANIIKEEKLNVKY-------LIVNEAGASVY 417
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFL 632
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 418 SASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL 477
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 478 ---------DSVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGN 523
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ +
Sbjct: 524 FKNRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAIL 574
Query: 753 KEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETLYLIR 810
I DL + L +A E LK++ K+ EN ET+ +
Sbjct: 575 GR-----IGFDLEKYNNELNVAREK-------LKSF----DYKKFAEENNFGLETVKDVH 618
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGL 870
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 619 EALLKDRRDPRDDFEKPLLKSDILNI-----DNLQVGMELEGTVRNVVKFGAFIDIGLKN 673
Query: 871 AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 674 DALLHVSEISDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 716
>gi|291550487|emb|CBL26749.1| Transcriptional accessory protein [Ruminococcus torques L2-14]
Length = 716
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 143/630 (22%), Positives = 263/630 (41%), Gaps = 115/630 (18%)
Query: 134 QKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNL 193
Q RK + Y + EE+ ++ + + +L + + K + AAET V+D L
Sbjct: 49 QLRKLYERLVYLRNLEEKKEQVI--SSIEEQGKLTEELKKQILAAETLVAVED------L 100
Query: 194 HFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELED 253
+ P RPKR T+ + + GL E L ++L+K + LE
Sbjct: 101 YRP-----------YRPKRRTRATIAKEKGL-----------EPLAALITLQKTKEPLE- 137
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCP 312
+T E S K S++ + GA + A IS E R ++R M V S
Sbjct: 138 --KTAEAYISEEKG--VESAKDAISGACDIIAESISDEAAYRTWIRETTMRKGKVTSQAK 193
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
P+ +S + +++F E+ + K + L + + E+EK L V ++ PE+ + +
Sbjct: 194 DPEAESVYEMYYEF-------EEAVAKLAGHRILALNRGEKEKFLTVKVEAPEEDILR-- 244
Query: 373 SDCKEHYLSDGVSKSAQLWNDQ--RELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
YL V ++ + +E I D+ + + P++ +E R+ ++ +A+ +
Sbjct: 245 ------YLERKVIRTENPYTTPVLKETI-ADSYNRLIGPAIEREVRNELTEKAEDGAIEV 297
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLF 489
+GK L + P K + W P + ++D +G+V+
Sbjct: 298 FGKNLHQLLMQPPIAGK--------------VVLGWDPAFRTGCKLAVVDETGKVI---- 339
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
G + ++ + ++ L K + + ++ LG S S + I +++
Sbjct: 340 -GTTVIYPTAPTTEKKIQASKDLLKKIIPKYHVSLISLGNGTASRES-----EQFIVELL 393
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
+E P V + V +E+ +Y S++++++ P + A ++ R LQ+PLA
Sbjct: 394 KEIPEKVQY-------VIVNEAGASVYSASKLATEEFPKFDVGQRSAASIARRLQDPLAE 446
Query: 610 VATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ + G G+ L L G++E D N+VG+D+N A
Sbjct: 447 LVKIDPKSIGVGQYQHDMNQKKLGESLN-----GVVE----DCVNKVGVDLNTA------ 491
Query: 666 FAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
APL +ISG+ A ++ G RK+ + LG K F GF+R+
Sbjct: 492 SAPLLSYISGISSAIAKNIVAYREENGRFTDRKELLKVPKLGPKAFEQCAGFMRI----- 546
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQELAKE 754
S+ + LD T +HPESY A++L K+
Sbjct: 547 ----SEGKNPLDATGVHPESYAAAEKLLKK 572
>gi|238916339|ref|YP_002929856.1| hypothetical protein EUBELI_00373 [Eubacterium eligens ATCC 27750]
gi|238871699|gb|ACR71409.1| Hypothetical protein EUBELI_00373 [Eubacterium eligens ATCC 27750]
Length = 763
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 169/770 (21%), Positives = 307/770 (39%), Gaps = 132/770 (17%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + ++ AAET V+D L+ P YK+ KR T+ + + GL
Sbjct: 79 KLTEELKAAITAAETMVLVED------LYRP----------YKQ-KRRTRATIAKEKGLE 121
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A +F Y+ E ED + E S+ + ++Q + GA + A
Sbjct: 122 PLA-QFIYAQEAT-------------EDVEVKAAEFISDEEGKEVATAQDAIAGALDIIA 167
Query: 286 VEISCEPCVRKYVRSIFM-DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ 344
+IS R Y+R I M + +V T +S ++++ ++ + L +
Sbjct: 168 EQISDVADYRTYIRDITMKEGKLVVTAKDEKAESVYENYYDYS-------EALSTIPGHR 220
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
L I + E+EK L V ++ PE+ + + YL + K + + + DA
Sbjct: 221 ILAINRGEDEKFLTVKVEAPEERILR--------YLEKNILKDNAFTEEYLKNCIADAYG 272
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
+ P++ +E RS ++ A+ + +GK L + P K +
Sbjct: 273 RLIAPAIEREIRSSLTETAEDGAIKVFGKNLEQLLLQPPIAGK--------------VVL 318
Query: 465 CWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
W P + ++D +G+ VL T + + + +SK ++ + K+ H
Sbjct: 319 GWDPAFRTGCKLAVVDPTGK---VLATKVIYPTEPHNKVAESKAEVKKLIDKY------H 369
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD-ELSIVYGDESLPRLYENSRIS 582
V ++ N + + + I D+ HEM+ + V +E+ +Y S+++
Sbjct: 370 VNLISCGNGTASRESEKIIS-----------DMIHEMNLPVDYVITNEAGASVYSASKLA 418
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKY 638
+++ P + AV++ R +Q+PLA + + G G+ LEN LT
Sbjct: 419 TEEFPDFDVAQRSAVSIARRVQDPLAELVKIDPKSIGVGQYQHDMNQKKLENTLT----- 473
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
G++E D N+VG+D+N A + L++ISG+ A ++ G RK
Sbjct: 474 GVVE----DSVNKVGVDLNTA-----SASLLEYISGISKAVAKNIVEYRETNGRFTNRKQ 524
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
+ LG K F GF+R+ LD T +HPESY A +L +
Sbjct: 525 LLKVAKLGPKAFEQCAGFMRISGGDNP---------LDATSVHPESYEAATKLLA-LLGY 574
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
DI + + L+ +E D L + TL I +EL +
Sbjct: 575 DINSITSGELIGLKSKVEDFAKMADELGIGTM--------------TLEDIVKELEKPGR 620
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
D R++ +P ++ + L G +++ TVR V A + G++
Sbjct: 621 DPRDEMPKPILRKDVLDMKD-----LTPGMILKGTVRNVIDFGAFVDIGVHQDGLVHISQ 675
Query: 879 YSDDWRDSELSDKLHEGDILTCKI--KSIQKNRYQVFLVCRESEMRNNRY 926
S R D + GDI+ ++ I K R + ++ E E N +Y
Sbjct: 676 MSSTKRVEHPLDVVSVGDIVDVRVIDVDIPKARISLSMILDEKEAANRKY 725
>gi|299473223|emb|CBN78799.1| similar to putative chromatin structure regulator [Ectocarpus
siliculosus]
Length = 286
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 967 VHPCFQNVTADEAMKLLS--AKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGK 1024
+HP F+N T EA + L + GE++IRPSS+GP +L+LT +G + H DI E GK
Sbjct: 1 MHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGK 60
Query: 1025 DHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDEL 1084
+ + LKIG + +EDLDE++ R + + +L+ K+ G+ AEV++
Sbjct: 61 QPGSM-----LAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKT 115
Query: 1085 LRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDR 1144
L+ +K + P RI Y PG L Y+ + + + P+G+ KR F+ +
Sbjct: 116 LQKQKDDAPNRIPY-LMCRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPE 174
Query: 1145 LVAYFQ 1150
L +F+
Sbjct: 175 LFKWFK 180
>gi|295109047|emb|CBL23000.1| Transcriptional accessory protein [Ruminococcus obeum A2-162]
Length = 719
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 162/689 (23%), Positives = 278/689 (40%), Gaps = 164/689 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL ND+ RT H+ L + +L+ K+
Sbjct: 31 IPFISRYRKEATGSL-------------NDEQLRT----LHERLTYLRNLE------DKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
L S EE ++ E L +Q+ D A+T V+D L+ P
Sbjct: 68 NQVLGSI------EEQGKLTPE----LKKQILD--------AQTLVVVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQ------LSLEKMGDE 250
RPKR T+ + GL +A+ L+ LS EK +
Sbjct: 104 -----------YRPKRRTRAIIAKEKGLEPLANIIMLQMTNKSLEEEAKAFLSDEKGVET 152
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN-AVVS 309
+ED + GA+ + A IS E R Y+R + MD VVS
Sbjct: 153 IED----------------------AINGAKDIIAEHISDEADYRIYLRKLTMDKGTVVS 190
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
P+ S + +++F E+P++K + L + + E+EK+L V I PED
Sbjct: 191 AAKNPEESSVYEMYYEF-------EEPIKKLAGHRVLALNRGEKEKMLTVKISAPEDEAM 243
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
K+ D L RE +++D+ + P++ +E RS ++ +A+ +
Sbjct: 244 GWLQ--KQVITRDNPVTKPVL----RE-VVEDSYKRLIAPAIEREIRSDLTEKAEDGAIH 296
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD-- 486
+GK L + P K + W P + ++D +G+V+D
Sbjct: 297 VFGKNLEQLLMQPPIVGK--------------VVLGWDPAFRTGCKLAVVDETGKVLDTT 342
Query: 487 VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
V++ T + + +E L K + + ++ LG S S +II
Sbjct: 343 VIYPTAPT-------NDAKIRAAKETLKKLIKKYNVSLISLGNGTASRES-----EQIIV 390
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
++++E P V + V +E+ +Y S++++++ P + A ++ R LQ+P
Sbjct: 391 ELLKEIPEKVQY-------VITNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDP 443
Query: 607 LAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHR 662
LA + + G G+ L L+ G++E D N+VG+D+N A
Sbjct: 444 LAELVKITPQSIGVGQYQHDMNQKKLGEALS-----GVVE----DCVNKVGVDLNTA--- 491
Query: 663 EWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRS 722
+ L++ISG+ A ++ G +R++ + LG K F GF R+
Sbjct: 492 --SASLLEYISGISKVIAKNIVAYREENGRFESRRELLKVAKLGPKAFEQCAGFARI-TG 548
Query: 723 GQAASSSQFIDLLDDTRIHPESYGLAQEL 751
G+ + LD T +HPESY A+++
Sbjct: 549 GR--------NPLDATSVHPESYEAAKKV 569
>gi|312129985|ref|YP_003997325.1| tex-like protein [Leadbetterella byssophila DSM 17132]
gi|311906531|gb|ADQ16972.1| Tex-like protein [Leadbetterella byssophila DSM 17132]
Length = 706
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 162/704 (23%), Positives = 288/704 (40%), Gaps = 152/704 (21%)
Query: 56 LSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLK 115
L++S I + ++LL +PFIA YRKE SL D+ K
Sbjct: 13 LNVSIQQISKTVELLEAGG-TVPFIARYRKEATGSL--------------DEVHILEIKK 57
Query: 116 WHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSL 175
W+ DK ++R + L+S E + L +L + + K+L
Sbjct: 58 WN---------DKMKEADKRRTAILESI--------------EAQGKLTSELRNKLEKTL 94
Query: 176 EAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSS 235
A+ E ++ P YK PK+ T+ S +AGL E +K +
Sbjct: 95 LLADLE----------EIYLP----------YK-PKKKTRASVAMEAGL-EPLAKLIFDQ 132
Query: 236 EQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR 295
+ L E +A + S L GAR + A I+ + R
Sbjct: 133 RERNL------------------ESIAGRYLNDKVKSVDEALAGARDIIAEWIADDLECR 174
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEK 355
K VRSI+ A V + + F + + E+ ++ ++L I++ EEE
Sbjct: 175 KRVRSIYERTAYVVSKVKKGKEEEGLKFKDY----FDYEEEAKRIPSHRYLAIKRGEEEG 230
Query: 356 LLQVTIKL-PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
+L+V +++ ED+ N+L + L G+ ++ +Q L L DAL ++PS+ KE
Sbjct: 231 ILKVGLEIEKEDAENQL-----QRLLLKGLPEA----KEQVNLALTDALKRLMMPSLEKE 281
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPY-QRKDNDITPDEEAAPRVLACCWGPGKPET 473
+ + +A + + L + P Q++ I P +V
Sbjct: 282 FDNALKEKADKAAIEIFTTNLRQLLLAAPMGQKRTMGIDPGFRTGCKV------------ 329
Query: 474 TFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN 531
V+LD+ G ++ DV++ T ++Q + +LL H+ V+ +G N
Sbjct: 330 --VILDAQGNLMADDVIYP---TFKAQEA---------EAKLLHLWEKHKTEVIAIG--N 373
Query: 532 LSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKG 591
+ + + + K ++ P+ V + E +Y S ++ ++ P +
Sbjct: 374 GTAGRETEQFVKDLLKR-KQLPQKV---------IMVSEQGASIYSASEVAREEFPEKDL 423
Query: 592 NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ 651
V+ AV++GR L +PLA + + P S + ++ + E ++ V+ N
Sbjct: 424 TVRGAVSIGRRLMDPLAELVKI-DPK----SIGVGQYQHDVNQKELKESLDAVVESCVNL 478
Query: 652 VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFV 711
VG+++N A L ++SG+GP A ++ G +RKD LG+KVF
Sbjct: 479 VGVELNTASKH-----LLSYVSGIGPSIAHNIVEFRASNGKFKSRKDLKKVPRLGEKVFE 533
Query: 712 NAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
A GFLR+ + LD+T +HPESY L +++AK++
Sbjct: 534 QAAGFLRIHGAEHP---------LDNTAVHPESYHLVEKMAKDL 568
>gi|402577709|gb|EJW71665.1| hypothetical protein WUBG_17431, partial [Wuchereria bancrofti]
Length = 145
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
Query: 898 LTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELA 957
+ C+I + +++ CR S++R + Q+ + D Y+ + + E++K +E+
Sbjct: 5 IYCRILELDPDKFSATCSCRSSDLRGLQPQNSE-FDRYFDKSKCQDDDEKDKKLREQRKI 63
Query: 958 KKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHK 1017
+F +R+I HP F NVT +A ++L E GE+IIRPSS+ S+LT+T KV DG+Y H
Sbjct: 64 VTYFVKRVISHPSFHNVTFKDAERMLQKFEQGEAIIRPSSKSVSHLTVTWKVADGIYQHI 123
Query: 1018 DIIEGGKDHKDIKSLVGIGKTLKIG 1042
DI E GK H+ +GKTL IG
Sbjct: 124 DIKEEGKQHQ-----FSLGKTLLIG 143
>gi|444917569|ref|ZP_21237664.1| Transcription accessory protein (S1 RNA-binding domain)
[Cystobacter fuscus DSM 2262]
gi|444710910|gb|ELW51871.1| Transcription accessory protein (S1 RNA-binding domain)
[Cystobacter fuscus DSM 2262]
Length = 770
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 162/759 (21%), Positives = 310/759 (40%), Gaps = 133/759 (17%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L ++++L+ A+T E++D+ L + +PKR T+ + + GL
Sbjct: 80 KLTPELTQALQRAKTRTELEDLYLPY-----------------KPKRRTRAAIARERGLE 122
Query: 226 EVASKF----GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGAR 281
+A G E + ++ D KE P++ +A L GAR
Sbjct: 123 PLADLLWKQEGARGEDVATRVRPFIHAD-----KEVPDQ-------------EAALAGAR 164
Query: 282 HMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE 341
+ A ++ + +R+ R + ++ + + F +A E+ L K
Sbjct: 165 DICAERVAEDAGLRRTARELCVNKGRLRSAVVAAKKGEATKFDNYAD----HEEDLSKAP 220
Query: 342 DAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKD 401
+ L + + E E++L++ + LP+D + K S V+K + ++D
Sbjct: 221 SHRILALLRGEAEEVLRLQLALPDD-------EVKGTLASRVVTKPQSPFAPHLRAAVED 273
Query: 402 ALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRV 461
+ + + PS+ E R+ + RA + +G+ L + + P A R
Sbjct: 274 SWERLMGPSLESELRNELKERADREAITVFGQNLRHLLLSPP-------------AGGRA 320
Query: 462 LACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL-TLRSQNVRDQQSKKNDQERLLKFMMD 519
+ PG + MLD++G++VD T L T R N R +++ +
Sbjct: 321 V-LALDPGLRTGVKATMLDATGKLVD---TATLYTERGANERATAARQCGA-----IIQK 371
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
H+P ++ +G N + + + + K++ + + +V E +Y S
Sbjct: 372 HKPELIAVG--NGTGSREAEGFVREVLKVLGVN----------VPVVSVSEQGASIYSAS 419
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
++ ++ P +++ AV++GR LQ+PLA + + + S + ++ + +
Sbjct: 420 EVAREEFPDLDVSLRGAVSIGRRLQDPLAELVKI-----DPKSIGVGQYQHDVDQGQLKK 474
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
+ +V+ N VG+D+N A Q L+ +SG+GP A + G TR++
Sbjct: 475 KLGEVVDSCVNAVGVDVNTA---SPQL--LEHVSGIGPTLAKKIVTHRAAKGRFTTRREI 529
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD 759
+ GLG K F A GFLRV + LD + +HPE Y + + +AK++ D
Sbjct: 530 LKVSGLGPKTFEQAAGFLRVHGP----------EPLDASAVHPERYSVVERMAKDL-GVD 578
Query: 760 IEGDLNDDEDALEMAIEHVRDR-PDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
++ + + AL I+ R PDL + L D I EL +
Sbjct: 579 VKQLVGN--AALVRKIDPKRYLGPDLGEMTLKD-----------------ILAELEKPSR 619
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
D R + PS E+ + + + EG V+Q V V A + G++
Sbjct: 620 DPRGDFTAPSYREDLQKL-----EDVKEGMVLQGVVTNVTAFGAFVDVGVHQDGLVHVSQ 674
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
S+ + + S+ + GD LT K+ ++ R ++ L R
Sbjct: 675 LSNRF-IKDPSEAVKVGDRLTVKVVNVDLVRKRLGLSVR 712
>gi|402837146|ref|ZP_10885674.1| Tex-like protein N-terminal domain protein [Eubacteriaceae
bacterium OBRC8]
gi|402275626|gb|EJU24771.1| Tex-like protein N-terminal domain protein [Eubacteriaceae
bacterium OBRC8]
Length = 714
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 130/603 (21%), Positives = 259/603 (42%), Gaps = 111/603 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
++ ++I SLE A T +EV+D+ + P +K+ KR T+ S + GL
Sbjct: 79 KMTENIRLSLENAMTLQEVEDI-------YAP---------FKQKKR-TRASVAKEKGLE 121
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
++ Q+ L+ +EK+ D ++ EE+ NS + + GA + A
Sbjct: 122 PLS--------QILLE-GIEKIEDRADEF--INEELE-------VNSKKDAIAGAMDIVA 163
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGD-----SAIDSFHQFAGVKWLREKPLRKF 340
I+ + ++K +R + D AV+ T + S + +F+ + K
Sbjct: 164 EIIADDFELKKQLRKLLFDTAVIMTSAKKGAEEKEDFSVYKMYMEFSEIS-------SKM 216
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK 400
+ L I + E++ +L+V I + K ++ Y+ +++ D +
Sbjct: 217 PSYRILAINRGEKDDILKVKI---DYDFEKFLETAQKSYIK------SEIHEDIMTDTIT 267
Query: 401 DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPR 460
D+L +LPS+ +E RS M+ RA+ + +G+ L + P + K
Sbjct: 268 DSLKRLMLPSLERELRSEMTSRAEEKAIAVFGENLSALLMQSPLKNK------------- 314
Query: 461 VLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
+ W P + ++D +G+V+D T QN ++ SK+ + +
Sbjct: 315 -VVLGWDPAYRTGCKIAVVDETGKVLDT--TTVYPTMPQNKVEETSKE-----ITSLINK 366
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
++ +++ +G S S E+ D+ MD + E+ +Y S
Sbjct: 367 YKVNIISIGNGTASRES-------------EQIVADIVKGMDNVYYTIVSEAGASVYSAS 413
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
++ ++L +++ AV++ R +Q+P++ + + E S + ++ +
Sbjct: 414 KLGEEELKDMNVSLRGAVSIARRIQDPMSELVKI-----EPKSIGVGQYQHDVNQKRLSE 468
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
++ V+ D N+VG+D+N A ++ L++ISG+ P A ++ + +G R +
Sbjct: 469 VLSNVVEDNVNKVGVDLNTA-----SYSILEYISGITPSIAKNIVKYRDTSGKFKNRDEL 523
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD 759
+ LG+ F GFLRV+ S +LLD+T IHPE+Y +L E+ + D
Sbjct: 524 LKVSRLGQSCFEQCAGFLRVKESD---------NLLDNTGIHPEAYEKTYKLL-EILDVD 573
Query: 760 IEG 762
I+
Sbjct: 574 IQS 576
>gi|291522082|emb|CBK80375.1| Transcriptional accessory protein [Coprococcus catus GD/7]
Length = 713
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 157/692 (22%), Positives = 281/692 (40%), Gaps = 164/692 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL-DKKWLLLQK 135
IPFIA YRKE+ +L ND+ R K ++ L + +L DKK ++
Sbjct: 32 IPFIARYRKEKTGAL-------------NDEVLR----KLYERLIYLRNLEDKKQQVIAT 74
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHF 195
I D+ ++ D++ K +E A+T+ VDD L+
Sbjct: 75 -------------------IRDQGKMT------DALLKQIEEAQTQVVVDD------LYR 103
Query: 196 PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
P RPKR T+ + GL ++A+ ++ LG + E+ D + +
Sbjct: 104 P-----------YRPKRRTRAMIAKEKGLEKLAA--AVMAQNLGHPVE-EEAADYVSE-- 147
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF-MDNAVVSTCPTP 314
E+ ++ K A L+GA + A I+ R ++R F + +VS
Sbjct: 148 ---EKGVADVKEA--------LEGASDILAESIADTAAYRMWIRQQFEKEGRLVSEAKDD 196
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS----LNK 370
S + ++ FA +P+ K + L I +AE+EK++ VTI++PE+ L +
Sbjct: 197 KEKSVYEMYYHFA-------EPVSKIAGHRVLAINRAEKEKMVNVTIEVPEEKLIGWLKR 249
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
K Y ++ + +A+ D+ + P++ +E R+ ++ +A+ +
Sbjct: 250 QVVHQKNPYTTEMMEAAAE-----------DSYRRLIAPAVEREVRNALTEKAEEGAMTV 298
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLF 489
+GK L + P + + W P + ++D +G+V+D +
Sbjct: 299 FGKNLQQLLMQPPIKGQT--------------VLGWDPAFRTGCKLAVVDPTGKVLDTVV 344
Query: 490 TGCLTLRSQNVRDQQSKKNDQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFK 547
+ KK DQ E L K + + ++ LG S S ++I
Sbjct: 345 I---------YPTEPQKKIDQAKEVLRKLVRKYGITLISLGNGTASRES-----EQVIVD 390
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
++E P V + V E+ +Y S++++++ P + A ++ R LQ+PL
Sbjct: 391 FLKEIPEKVAY-------VIVSEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPL 443
Query: 608 AMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
A + + G G+ L L+ G +E D N+VG+D+N A
Sbjct: 444 AELVKIDPKAIGVGQYQHDMNQKKLSEVLS-----GTVE----DCVNKVGVDLNTA---- 490
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+ L++ISG+ A ++ G RK + LG K + GFLR+
Sbjct: 491 -SASLLEYISGISKTVAKNIVAYREENGRFDNRKQLLKVPKLGPKAYEQCAGFLRISDGS 549
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
Q LD+T +HPESY ++L E+
Sbjct: 550 QP---------LDNTGVHPESYEAVRKLLSEL 572
>gi|389585898|dbj|GAB68628.1| hypothetical protein PCYB_135020 [Plasmodium cynomolgi strain B]
Length = 1208
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 155/321 (48%), Gaps = 32/321 (9%)
Query: 572 LPRLYENS-RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP-GREILSWKLCPLE 629
+P + NS + S+D ++L R++QNPL +V +L + + + L L+
Sbjct: 435 IPSIVTNSLKYSADLTSKYSREALLCLSLCRFVQNPLCVVISLFEEENKNMFNICLHDLQ 494
Query: 630 NFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF-APLQFISGLGPRKAASLQRSLV 688
++ + + +++VDV N+ G DIN ++ L +++GLG RK L + L+
Sbjct: 495 KYVCSYKLEALFHRIIVDVVNKTGCDINFLKKKKKHLGVMLSYVAGLGLRKREELIK-LL 553
Query: 689 RAGAIFTRKDFVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP-E 743
+ TR+D +T +GK ++ N F+R+ G ++++ LD+TRIHP
Sbjct: 554 HNRNLSTREDLLTLSSNKNLIGKCIYRNCSSFIRIIGHG-----DEYVEALDNTRIHPLN 608
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---E 800
Y + +L K V I+ N+ + ++ ++ L++ + IK+ R +
Sbjct: 609 CYDIIHDLFKNV----IDTKKNNFLKGTYDIVNYIINKKKLIR----NMEIKDYSRRFYD 660
Query: 801 NKRETLY----LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRR 856
+K+ +Y I+ EL+H ++D+R Y++ ++E FY I E ++ LA G V +
Sbjct: 661 DKKIYIYPYLKFIQTELMHPYKDYRYNYEKKKEEELFYQIINEKKENLAIGSEVVCKMDY 720
Query: 857 VQGQR---AICVLESGLAGML 874
+ I +L + G++
Sbjct: 721 INKNNNYIKITILPYNIRGII 741
>gi|210615499|ref|ZP_03290626.1| hypothetical protein CLONEX_02842 [Clostridium nexile DSM 1787]
gi|210150348|gb|EEA81357.1| hypothetical protein CLONEX_02842 [Clostridium nexile DSM 1787]
Length = 726
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 157/697 (22%), Positives = 294/697 (42%), Gaps = 156/697 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL ND+ R K ++ L + +L+ +K+
Sbjct: 40 IPFISRYRKEATGSL-------------NDEQLR----KLYERLMYLRNLE------EKK 76
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L + EE ++ +E +L + AAET V+D L+ P
Sbjct: 77 EQVLATI------EEQGKLTEELKL------------QILAAETLVVVED------LYRP 112
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL E L ++L+K +E+ +
Sbjct: 113 -----------YRPKRRTRATIAKEKGL-----------EPLAALITLQKTKVPIEEAAK 150
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+ K A + + GA+ + A IS E R Y+R + + S
Sbjct: 151 SYISEEKEVKTA-----EEAINGAKDIIAEYISDEADYRIYIRDLTAKQGKITSIAKDAQ 205
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + +++F E+P+ K + L + + E+EK+L V ++ PE+ + +
Sbjct: 206 TESVYEMYYEF-------EEPITKLAGHRILALNRGEKEKILTVKVEAPEERILQYLE-- 256
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
K+ SD V + L +++D+ + P++ +E RS ++ +A+ + +GK L
Sbjct: 257 KKVISSDNVYTTPILQE-----VIEDSYKRLIAPAIEREIRSDLTEKAEDGAIEVFGKNL 311
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGC 492
+ P + + W P + ++D++G+V+D V++
Sbjct: 312 EQLLMQPPIVGQ--------------VVLGWDPAFRTGCKLAVVDATGKVLDTTVIYPTA 357
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
T Q + Q+ K ++L++ + + L +V S + + +II ++ +E
Sbjct: 358 PT-TPQKI---QAAKETLKKLIR------KYGITLFSVGNGTASRESE--QIIVELFKEI 405
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
P V + + +E+ +Y S++++++ P + A ++ R LQ+PLA +
Sbjct: 406 PEKVQY-------IITNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLAELVK 458
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ L L+ G++E D N+VG+D+N A AP
Sbjct: 459 IDPKSIGVGQYQHDMNQKKLSEALS-----GVVE----DCVNKVGVDLNTA------SAP 503
Query: 669 L-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L +ISG+ A ++ G+ +RK + LG K F GF+R+ + G+
Sbjct: 504 LLAYISGISNAIAKNIVTYREENGSFTSRKQLLKVAKLGPKAFEQCAGFMRI-QGGK--- 559
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKE--VYNRDIEG 762
+ LD T +HPESY A++L ++ +DI G
Sbjct: 560 -----NPLDATSVHPESYEAAEKLLEKQGFTTKDITG 591
>gi|156102388|ref|XP_001616887.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805761|gb|EDL47160.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 2637
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 190/431 (44%), Gaps = 56/431 (12%)
Query: 479 DSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLK-------FMMDHQPHVVVLGAVN 531
D G++V+ ++ L L ++ ++ +QE++ K F+ +P V+V+G +
Sbjct: 1751 DIYGDIVEYIYLDNLYL---DIAKKEKMAVEQEKIAKDIGVFGSFLKKIKPDVIVVGVRD 1807
Query: 532 LSCTSLKDDIYEIIFKMVEEHPRDVGHEMD----------ELSIVYGDESLPRLYENS-R 580
+ +Y + V G + + ++ + +P + NS +
Sbjct: 1808 VYSYL----VYSYVLGFVSGGSHLAGGHLSGSQHLLGPPGKYVVIPENLYIPSIVTNSLK 1863
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP-GREILSWKLCPLENFLTPDEKYG 639
S+D ++L R++QNPL +V +L + +L+ L L+ ++ +
Sbjct: 1864 YSADLTSKYSREALLCLSLCRFVQNPLCVVISLFEEENKNMLNICLHDLQKYVCSYKLES 1923
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQF-APLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
+ +++VDV N+ G DIN ++ L +++GLG RK L + L+ + TR+D
Sbjct: 1924 LFHRIIVDVVNKTGCDINFLKKKKKHLGVMLSYVAGLGLRKREELIK-LLHNRNLSTRED 1982
Query: 699 FVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP-ESYGLAQELAK 753
+T +GK + N F+R+ G ++++ LD+TRIHP Y + +L K
Sbjct: 1983 LLTLSANKNLIGKCTYRNCSSFIRIIGHG-----DEYVEALDNTRIHPLNCYDIIHDLFK 2037
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLY--- 807
V + L D + I K + + IKE R E+K+ +Y
Sbjct: 2038 NVIDTKKNNFLKSTYDIVNYIINK--------KKLIRNMEIKEYSRRFYEDKKIYIYPYL 2089
Query: 808 -LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA---I 863
I+ EL+ ++D+R Y+ ++E FY+I E ++ L G V + + + I
Sbjct: 2090 KFIQTELMQPYKDYRYSYERKKEEELFYLIINEKKENLTIGSEVVCKMDYINKNSSYIKI 2149
Query: 864 CVLESGLAGML 874
+L + G++
Sbjct: 2150 TILPYNIRGII 2160
>gi|371775968|ref|ZP_09482290.1| RNA-binding protein [Anaerophaga sp. HS1]
Length = 705
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 160/689 (23%), Positives = 271/689 (39%), Gaps = 168/689 (24%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL +EV + I + +K+ L+KR
Sbjct: 32 IPFISRYRKERTGSL------DEV------------------AITTIKENYEKFKELEKR 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+ + K EE+ AL ++L I + E E D+ L F
Sbjct: 68 KATVL----KAIEEQD---------ALTEELKQRIDNCYDPVELE----DLYLPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+PKR T+ S + GL +A K E+
Sbjct: 106 ------------KPKRKTRASKAKELGLEPLAQKLFKQYEK------------------- 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+ +A NF ++A LQGAR + A I+ + R+ VR F +V+++ D
Sbjct: 135 DVDALAENFLSDQIPDTEAALQGARDIIAEWINEDKTAREIVRKAFYHKSVIASKLVKDK 194
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDC 375
+ + + +W +PL+K ++L + + E+E L+++ PE+ + L
Sbjct: 195 EEDGAKYRDY--FEW--SEPLKKCPSHRFLAMMRGEKEGFLKISAHPDPEEVIPLL---- 246
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
K H++ + S Q+ L L+DA L PS+ E + +A + + + L
Sbjct: 247 KRHFVKGTAAASEQV-----SLALEDAYKRLLAPSLENETLATFKEKADEEAIKVFAENL 301
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ P +K RVLA PG + V LD+ G++
Sbjct: 302 RQLLLAPPLGQK------------RVLAI--DPGYRTGCKVVCLDAQGQL---------- 337
Query: 495 LRSQNVRDQQSKKNDQERLLKF--MMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
L ++ + +K + + K M+D ++ + +G S + E
Sbjct: 338 LHNETIYPHPPQKETGKAIKKLSSMVDAYKIEAIAIGNGTAS-------------RETEA 384
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
R + D + + E +Y S+++ ++ P V+ AV++GR L +PLA +
Sbjct: 385 FVRKIKFNRD-IQVFVVSEDGASVYSASKVAREEFPEYDVTVRGAVSIGRRLMDPLAELV 443
Query: 612 TL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
+ G G+ L+ L ++V+ V N VG+++N A H
Sbjct: 444 KIDPKSIGVGQYQHDVDQTRLKEAL---------DRVVESVVNMVGVNLNTASHH----- 489
Query: 668 PLQFISGLGPRKAASLQRSLV----RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
L +ISGLGP SL R++V G +R++ LG K F A GFLR+ +
Sbjct: 490 LLTYISGLGP----SLARNIVAWRNENGPFKSREELKKVPRLGNKAFEQAAGFLRITDAQ 545
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELA 752
LD+T +HPESY + +A
Sbjct: 546 NP---------LDNTAVHPESYAIVTRMA 565
>gi|238923236|ref|YP_002936751.1| transcription accessory protein [Eubacterium rectale ATCC 33656]
gi|238874910|gb|ACR74617.1| transcription accessory protein [Eubacterium rectale ATCC 33656]
Length = 786
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 155/701 (22%), Positives = 285/701 (40%), Gaps = 161/701 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N F+R L+ L K+
Sbjct: 31 IPFIARYRKEATGSLNDEVLRNL--------FDRLTYLRN---------------LEDKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ L S EE+ + L D + K++ A+T+ VDD L+ P
Sbjct: 68 QTVLASI-----EEQGK-------------LTDELKKAILEAQTQVAVDD------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A + + K D +D
Sbjct: 104 -----------YRPKRRTRATIAKEKGLEPLAQTILAQESSVDIMAEAAKYVDAEKD--- 149
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
A L GA+ + A +S R +R + M ++ST P
Sbjct: 150 -------------VADEAAALAGAKDIIAENVSDNADYRTKIRELTMQKGRLISTAKDPK 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + +++F ++ L K + L I + E+EK+L V I+ P + + K
Sbjct: 197 AESVYEMYYEF-------DEALSKVAGHRTLAINRGEKEKILTVKIEAPTEDIIKYLK-- 247
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
K+ +DG +A L +++DA + + P++ +E R+ ++ A+ + +GK L
Sbjct: 248 KQVITNDGAPTAAVLTE-----VVEDAYNRLIAPAIEREIRNNLTEEAEDGAIKVFGKNL 302
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGC 492
+ P A VL W P + ++D +G+V+D V++
Sbjct: 303 EQLLMQPPI------------AGQVVLG--WDPAFRTGCKISVVDPTGKVLDTTVIYPTA 348
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
Q+K ++ + ++K ++D HV ++ N + + + ++I ++++E
Sbjct: 349 ----------PQNKVDEAKAIIKKLIDKH-HVTLISLGNGTASRESE---QVIVELLKEI 394
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
P V + + +E+ +Y S++++++ P + A ++ R LQ+PLA +
Sbjct: 395 PVKVQY-------IIVNEAGASVYSASKLATEEFPNFDVGQRSATSMARRLQDPLAELVK 447
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ L L G++E D N+VG+D+N A +
Sbjct: 448 IDPKSIGVGQYQHDMNQKKLSEALG-----GVVE----DCVNKVGVDLNTA-----SVSL 493
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L++ISG+ A ++ G +R + LG K F GF+R+
Sbjct: 494 LEYISGISKTIAKNIVDYREENGKFTSRSQLLKVAKLGPKAFEQCAGFMRI--------- 544
Query: 729 SQFIDLLDDTRIHPESYGLAQEL-------AKEVYNRDIEG 762
S + LD T +HPESY + + ++V NR++ G
Sbjct: 545 SDGKNPLDATGVHPESYDATKAVLEKLGYTMEDVKNRNVVG 585
>gi|326799943|ref|YP_004317762.1| Tex-like protein [Sphingobacterium sp. 21]
gi|326550707|gb|ADZ79092.1| Tex-like protein [Sphingobacterium sp. 21]
Length = 746
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 159/715 (22%), Positives = 283/715 (39%), Gaps = 154/715 (21%)
Query: 44 QRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNND 103
QR AG DLS++ + + LL + +PFI+ YRKE SL
Sbjct: 6 QRIAG------DLSLNDRQVRTTIQLLD-EGATVPFISRYRKELTGSL------------ 46
Query: 104 NNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLAL 163
D+ + + AI D + L KR+ A+ I T L
Sbjct: 47 --DEIQ----------VAAIRDRIGQLRDLDKRREAI--------------IKSLTELG- 79
Query: 164 NQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAG 223
+L + LE AET ++D+ L + +PKR T+ S + G
Sbjct: 80 --KLSPELQSKLEEAETMAVLEDIYLPY-----------------KPKRKTRASVAREKG 120
Query: 224 LWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC--AMFNSSQAVLQGAR 281
L +A L+ + + E+ A+ F +S + L GAR
Sbjct: 121 LEPLADWL-------------------LKQEQSSVEDFAATFVNDEKGVSSVEEALAGAR 161
Query: 282 HMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE 341
+ A I+ R +R FM+N ++ P + + + +W +PL+
Sbjct: 162 DILAETIAEHAETRAQMRDFFMENGSFASRVVPGKEEEAIKYKDY--YEWT--EPLKAAP 217
Query: 342 DAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKD 401
+ L +++ E+E++L + +++P+D L + ++ + + Q+ L ++D
Sbjct: 218 SHRILAMRRGEKEQMLYLDVEVPDDEAIALIDN---RFVKNASPAALQI-----RLAVQD 269
Query: 402 ALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRV 461
+ L PSM E R + RA + + + + P K R
Sbjct: 270 SFKRLLKPSMETEVRLITRKRADEEAIRVFAENARQLLLAAPMGSK------------RT 317
Query: 462 LACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDH 520
LA PG + V LD G+ L T T+ N ++++ Q +LL + +
Sbjct: 318 LAI--DPGFRTGCKVVCLDEQGK----LLTNT-TVYPHNGTAKEAEAAHQIQLL--VKQY 368
Query: 521 QPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSR 580
Q + +G N + +D + ++ ++ +V +ES +Y S
Sbjct: 369 QIEAIAIG--NGTAGRETEDFVRKL-------------QIPDVIVVMVNESGASIYSASE 413
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
++ ++ P V+ AV++GR L +PLA + + + ++ +N L
Sbjct: 414 VAREEFPDYDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKLQES----- 468
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFV 700
+ ++ N VG+++N A + L ++SGLGP A S+ + GA R D
Sbjct: 469 LADTVISCVNAVGVELNTASKQ-----ILAYVSGLGPALAQSIVEYRNQHGAFRRRADLK 523
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LG+K F A GFLR+R + LD + +HPE Y L +E+AK++
Sbjct: 524 KVPRLGEKAFEQAAGFLRIRGAENP---------LDASAVHPERYALVEEMAKDL 569
>gi|291460836|ref|ZP_06025454.2| S1 RNA binding domain protein [Fusobacterium periodonticum ATCC
33693]
gi|291380427|gb|EFE87945.1| S1 RNA binding domain protein [Fusobacterium periodonticum ATCC
33693]
Length = 733
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 159/772 (20%), Positives = 326/772 (42%), Gaps = 150/772 (19%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L D + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 91 KLTDELRNSIVEAKILQEVEDI------YFPY-----------RKKKKTKADIAKERGLE 133
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y++ L E + +A +F + + ++GA + A
Sbjct: 134 PLAEKF-YTANNL-----------------EEIQNLAKDFITGEVPTVEDAVEGAMLIIA 175
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ ++++ + D + +++++ + + K
Sbjct: 176 QNISEKAEYRERIREIYLKSSIIEAKASKKAAELDEKKVYNDYYEYS-------EKIDKM 228
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK 400
+ L + + E+E +L V ++L + K+ + + + + + + + I+K
Sbjct: 229 ASHRILAVNRGEKEDILTVHLRLEDSDREKIENMILKEFPKNNLVATYKE-------IIK 281
Query: 401 DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEAAP 459
D+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 282 DSLDRLIIPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRTGC 341
Query: 460 RVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMM 518
+V +G + T F ++++ + + + ++ +++ L +
Sbjct: 342 KVAVIDKYGFYRENTVFFLVEA-------------------MHNPKQIEDAKKKFLALVK 382
Query: 519 DHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYEN 578
++ +V +G S + + + + +++E+ ++ + + +E+ +Y
Sbjct: 383 KYEIDIVSIGN---GTASRETETF--VANIIKENKLNLKY-------LIVNEAGASVYSA 430
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTP 634
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 431 SKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL-- 488
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 489 -------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVEYRKENGNFK 536
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
RK+ + G+G K + GFL V G+ ++LD+T IHPESY +A+ L ++
Sbjct: 537 NRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYAIAEALLEK 587
Query: 755 V------YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETL 806
+ YN +LN+ R+R LK++ K+ EN ET+
Sbjct: 588 IGFSLEKYN----NELNE-----------ARER---LKSF----DYKKFAEENNFGAETV 625
Query: 807 YLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVL 866
+ L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 626 KDVYEALLKDRRDPRDDFEKPLLKSDILNI-----DNLEVGMELEGTVRNVVKFGAFVDI 680
Query: 867 ESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
+L + S+ + D S L G I+ +IK + K+R +V L +E
Sbjct: 681 GLKNDALLHISEISNKYIDDP-SKVLAVGQIIKVRIKDVDKDRGRVGLTKKE 731
>gi|310659605|ref|YP_003937326.1| transcriptional accessory protein [[Clostridium] sticklandii]
gi|308826383|emb|CBH22421.1| transcriptional accessory protein [[Clostridium] sticklandii]
Length = 717
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 205/485 (42%), Gaps = 82/485 (16%)
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID-----SFHQFAGVKW 331
+ GA + A I+ + ++K +R+I AV+ + D +H+++ +
Sbjct: 155 IAGAMDIVAETIADDFELKKKLRAIVFKEAVLEASAKKGSEEKEDFLVYKMYHEYSEL-- 212
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLW 391
K + L + + E+E +L+V + P L K+ + Y+ + K+
Sbjct: 213 -----CSKMPAHRVLAVNRGEKEDILKVKLNYP---LEKITEVSERAYIKSDIHKAVMAD 264
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
+KD+L+ +LPS+ +E R+ ++ A+ + +G+ L N + P K
Sbjct: 265 T------IKDSLNRLMLPSLERELRTSITEMAEERAIAVFGENLRNLLMQSPLYGKT--- 315
Query: 452 TPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQ 510
W P + ++D +G+V+D T QN + ++KK
Sbjct: 316 -----------VLGWDPAYRTGCKIAVVDETGKVLDT--TTVYPTVPQN-KVAETKKE-- 359
Query: 511 ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDE 570
+LK + H ++ +G S S I+ +V+E R V S + E
Sbjct: 360 --ILKLIDKHNIDIIAIGNGTASRES-----EAIVADIVKESSRKV-------SFIIVSE 405
Query: 571 SLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLC 626
+ +Y S + ++LP +++ AV++ R LQ+PL+ + + G G+
Sbjct: 406 AGASVYSASALGEEELPELNVSIRGAVSIARRLQDPLSELVKIDPEHIGVGQYQHDVNQK 465
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
L LT G++E D N+VG+D+N A +A L +++G+ A ++ +
Sbjct: 466 RLSEVLT-----GIVE----DSVNRVGVDLNTA-----SYAILSYVAGINKTIAKNIIKY 511
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
G TRK + LG + GFLRV+ SG+ +LD T +HPESY
Sbjct: 512 RDENGKFSTRKQLLKVARLGPAAYEQCAGFLRVKESGE---------VLDRTGVHPESYK 562
Query: 747 LAQEL 751
A L
Sbjct: 563 AAYAL 567
>gi|325678259|ref|ZP_08157887.1| Tex-like protein N-terminal domain protein [Ruminococcus albus 8]
gi|324110022|gb|EGC04210.1| Tex-like protein N-terminal domain protein [Ruminococcus albus 8]
Length = 761
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 158/706 (22%), Positives = 282/706 (39%), Gaps = 154/706 (21%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+ SI ++ + + LL + + IPF+A YRKEE SL DD
Sbjct: 8 AQEFSIRQEQVDNTVALLD-EGMTIPFVARYRKEETGSL--------------DD----- 47
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
I +L + L+ +KR EE S I ++ ++ D I+
Sbjct: 48 --------QVIRELFDRLTYLRN--------LEKRKEEVSNTITEQGKMT------DDIA 85
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
++E A T EV+D+ + P YK PKR T+ S + GL +A
Sbjct: 86 AAIEKAVTLVEVEDI-------YRP---------YK-PKRKTRASVAREKGLEPLAELIM 128
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
+E DP E S K + A +QGA + A ++S
Sbjct: 129 AQAENT--------------DPNAEAEAFISEEKG--VEDAAAAVQGAMDIIAEDVSDNA 172
Query: 293 CVRKYVRSIFMDNA-VVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKA 351
+RK +R + + + S+ D D ++ +++ + + K + L + +
Sbjct: 173 ELRKKLREAYNKSGKISSSAAAEDADVVYKNYFEYS-------EGVEKTAGHRVLALDRG 225
Query: 352 EEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
E+E L+V+I +PE ++ CK Y+ + S +L E D+ + PS+
Sbjct: 226 EKEGALKVSISVPEGMGEEI---CKAQYVQND-SACGKLVAAACE----DSFTRLIAPSV 277
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKP 471
+E R+ +S A+ + + L + P + N +T PG
Sbjct: 278 EREIRAELSQNAQEGAIKVFSSNLRQLLMAPPVK---NTVT-----------LGLDPGYA 323
Query: 472 E-TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAV 530
++D +G+V+D T + L R +++KK + K+ +V +
Sbjct: 324 HGCKCAVVDETGKVLD---TTIVYLTQSERRREEAKKQLSGMIKKY------NVTTIAIG 374
Query: 531 NLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE-LSIVYGDESLPRLYENSRISSDQLPGQ 589
N + + + EE D+ M+ +S + E+ +Y S++++++ P
Sbjct: 375 NGTAS-----------RETEEFTADMIRGMEGGVSYMVVSEAGASVYSASKLAAEEFPDY 423
Query: 590 KGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
+++ AV++ R LQ+PLA + + G G+ +++ L G++E
Sbjct: 424 DVSLRSAVSIARRLQDPLAELVKIDPKAIGVGQYQHDMPKARMDDALK-----GVVE--- 475
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGL 705
D N VG+D+N A ++ L +I+G+ A ++ GA RK + L
Sbjct: 476 -DCVNSVGVDVNTA-----SYSLLSYIAGINSAVAKNIVLYREENGAFTDRKQLLKVKKL 529
Query: 706 GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
G K + GFLRV + D+T IHPESY A+ L
Sbjct: 530 GAKAYEQCAGFLRVPEAKNP---------FDNTGIHPESYAAAKAL 566
>gi|167628523|ref|YP_001679022.1| hypothetical protein HM1_0392 [Heliobacterium modesticaldum Ice1]
gi|167591263|gb|ABZ83011.1| conserved domain protein [Heliobacterium modesticaldum Ice1]
Length = 729
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 190/885 (21%), Positives = 349/885 (39%), Gaps = 178/885 (20%)
Query: 43 GQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNN 102
G+R + +L + + + ++LL + IPFIA YRKE +
Sbjct: 6 GERSLLAEMIAKELGLKAVQVAKAIELLD-EGNTIPFIARYRKEATGEM----------- 53
Query: 103 DNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLA 162
D N E LK+ + L Q+++ L+S EE+ +
Sbjct: 54 DENKLRELAERLKYLRSLA------------QRKEEVLKSI-----EEQGK--------- 87
Query: 163 LNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKA 222
D ++K+LE A+T EV+D+ L F RPKR T+ S +
Sbjct: 88 ----WTDDLAKALEQAKTLAEVEDIYLPF-----------------RPKRKTRASQARER 126
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM--FNSSQAVLQGA 280
GL +A + ++G TPE A+ F + A LQGA
Sbjct: 127 GLEPLARLIQAQALRVG-----------------TPEAAAAPFVNPEKDVPDAAAALQGA 169
Query: 281 RHMAAVEISCEPCVRKYVRSIFMDNAV-VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRK 339
+ A E++ + VR++VR+ V V+ P+ + ++ + +P+ K
Sbjct: 170 LDIIAEEVAEDAEVRRWVRAFTARRGVLVAKAVDPEATTPYLMYYDY-------REPVAK 222
Query: 340 FEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELIL 399
+ L I + E+EK+L+V I++ + + + +L + ++ D+ L
Sbjct: 223 IPPHRVLAINRGEKEKVLKVKIEVEWEPIGR--------HLESRLITGPSIFMDRLRETL 274
Query: 400 KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAP 459
+D+ L P+M +E R+ ++ +A+ + + L N + P R+
Sbjct: 275 QDSYKRLLAPAMERELRNELTEKAEEQAMKVFQANLKNLLMQPPIGRR------------ 322
Query: 460 RVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMM 518
RVL PG + + L +G +++V G + R +++K N L + +
Sbjct: 323 RVLGI--DPGFRTGCKWAALTETGSLLEV---GVIYPHEPQKRWEEAKGN----LCQIVK 373
Query: 519 DHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYEN 578
H ++ +G S + +V E +G + + E+ +Y
Sbjct: 374 KHGIELIAIGNGTASRET---------EALVAEA---IGEMEQAVQFIIVSEAGASVYSA 421
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKY 638
S ++ ++ P +++ A+++GR LQ+PLA + + + ++ D
Sbjct: 422 SPLAGEEFPHFDLSLRSAISIGRRLQDPLAELVKIEPKALGVGQYQ---------HDMNQ 472
Query: 639 GMIEQVMVDV----TNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+E+ + DV N VG+D+N A + L++++G+ + A ++ G
Sbjct: 473 KRLEETLGDVVESCVNTVGVDLNTA-----SASLLRYVAGISSQVAKNIVAYREEKGPFR 527
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
R + LG + FV GF+R+ LD+T +HPESY A L K
Sbjct: 528 KRSELKKVSRLGPQAFVQCAGFVRIPDGDNP---------LDNTPVHPESYDGALRLLKV 578
Query: 755 V--YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRE 812
+ DI G +++ L+ A+ V D + + L TL I
Sbjct: 579 LGFGPADIGGPRHNE---LKAALAKV-DVAKMAEATGLG-----------VPTLKDIIEA 623
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
L+ +D R +P + D L EG V+Q TVR V A + G
Sbjct: 624 LMKPGRDPREDLPKPRFSSAVLSL-----DNLKEGMVLQGTVRNVVDFGAFVDIGIKHDG 678
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
++ +D + + + + GDI+T + S+ + R +V L R
Sbjct: 679 LVHVSQLADKFVRHPM-EVVAVGDIVTVAVLSVDRQRERVGLTMR 722
>gi|331270412|ref|YP_004396904.1| RNA binding S1 domain-containing protein [Clostridium botulinum
BKT015925]
gi|329126962|gb|AEB76907.1| RNA binding S1 domain protein [Clostridium botulinum BKT015925]
Length = 722
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 153/677 (22%), Positives = 279/677 (41%), Gaps = 121/677 (17%)
Query: 259 EEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE AS F + +S L GA+ + A IS E RK++R N ++ + +
Sbjct: 142 EEYASKFINEEKEVSSEIEALNGAKDIVAEAISDEAEYRKWIREFVRKNGMIECTGSSEE 201
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ + ++ ++ + + K + L I + E+EK+L V + NK+
Sbjct: 202 PTPYEMYYDYS-------EAILKIPSHRILAINRGEKEKVLSVKVTC---DTNKII---- 247
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
YL+ K + + E ++D+L + PS+ +E R+ ++ + + + + L
Sbjct: 248 -EYLNRKCKKENSITDKFIEESVEDSLKRLIYPSIEREIRAELTDKGEEGAIDVFKANLS 306
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
+ P + K + + PG + +LD +G+++D
Sbjct: 307 ALLMQAPIKGK--------------VVLGYDPGFRTGCKIAVLDDTGKLLDT--ATVYAT 350
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
QN D K L + + H VV LG S S E++ +++E+ ++
Sbjct: 351 APQNDVDGSIK-----ILKELVYKHNVDVVSLGNGTASRES-----EEVLARLIEDVKKE 400
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL-- 613
G + L V E+ +Y S +++ + P +++ A+++GR LQ+P+A + +
Sbjct: 401 SGKD---LFYVVVSEAGASVYSASELATKEYPDINVSIRGAISIGRRLQDPMAELVKIDP 457
Query: 614 --CGPGR---EILSWKLCPLENFLTPDEKY-GMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G+ ++ S +L DE G++E +V N VG+D+N+A +
Sbjct: 458 KSIGVGQYQHDVSSKRL---------DESLSGVVE----NVVNSVGVDLNIATP-----S 499
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L +ISG+ A ++ G RK+ + LG K F GFLRV S +
Sbjct: 500 LLSYISGINSTIAKNIVEFREENGKFNNRKELLKVKRLGPKAFEQCAGFLRVTESKE--- 556
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV-YNRD--IEGDLNDDEDALEMAIEHVRDRPDL 784
+LD+T +HPESY +E K + Y D I+G+L D
Sbjct: 557 ------VLDNTSVHPESYKATKEFLKILGYTEDNIIKGNLLD------------------ 592
Query: 785 LKTYLLDRHIKEKKRENKRE-------TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMIS 837
LD ++E K E E TL I +E+ +D R + +P + I+
Sbjct: 593 -----LDSKVREHKVETLAEKLGIGVPTLEDIIKEIKKPGRDPREELPKPIFKKGIVDIN 647
Query: 838 GETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDI 897
D + G TVR V A + G++ SD + + L D + GD+
Sbjct: 648 QLKPDMMLTG-----TVRNVADFGAFVDIGVHQDGLVHISQLSDKFVKNPL-DIVKVGDV 701
Query: 898 LTCKIKSIQKNRYQVFL 914
+ ++ + + R ++ L
Sbjct: 702 VEVRVLEVDEKRGRISL 718
>gi|393783625|ref|ZP_10371797.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides salyersiae CL02T12C01]
gi|392668550|gb|EIY62045.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides salyersiae CL02T12C01]
Length = 710
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 125/551 (22%), Positives = 233/551 (42%), Gaps = 92/551 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L + L L++ + E +F
Sbjct: 106 KPKRKTRAEAARQKGL-----------EPLAVTLMLQR--------ENNLEAKVGSFVKG 146
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ + L+GAR + A +++ + R +R+ F AV+S + + +
Sbjct: 147 DVKTIEDALKGARDIIAEQVNEDERARNAIRNQFSRQAVISAKVVKGKEEEAAKYRDY-- 204
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ +PL++ + L I++AE E +L+V+I P+D +C E V +
Sbjct: 205 --FEFSEPLKRCTSHRLLAIRRAESEGMLKVSIS-PDDE------ECIERLERQFVRSNN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ E + +DA L PS+ E ++ +A + + + L + P +K
Sbjct: 256 ECGRQVAEAV-QDAYKRLLKPSIETEFAAITKEKADEEAIRVFVENLRQLLLAPPLGQK- 313
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ---Q 504
RVLA PG + V LD+ G + L ++N+ +
Sbjct: 314 -----------RVLA--IDPGFRTGCKIVCLDAQGNL----------LHNENIYPHPPVE 350
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
KK +L K + +Q + +G + T+ ++ Y F ++ R L
Sbjct: 351 KKKEAAAKLRKMVEAYQIEAIAIG----NGTASRETEY---FVTTQQFDRP-------LQ 396
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
+ E +Y S+I+ D+ P V+ AV++GR L +PLA + + P S
Sbjct: 397 VFVVSEQGASIYSASKIARDEFPEYDVTVRGAVSIGRRLMDPLAELVKI-DPK----SIG 451
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+ ++ + + ++Q + + N VG+++N A L +ISGLGP+ A ++
Sbjct: 452 VGQYQHDVDQSKLKKALDQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQLAQNIV 506
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
GA +RK+ + +G K F GFLR+ Q ++ LD+T +HPES
Sbjct: 507 NYRAENGAFGSRKELMKVPRMGAKAFEQCAGFLRI---------PQAVNPLDNTAVHPES 557
Query: 745 YGLAQELAKEV 755
Y + +++AK++
Sbjct: 558 YCIVEQMAKDL 568
>gi|381180480|ref|ZP_09889320.1| Tex-like protein [Treponema saccharophilum DSM 2985]
gi|380767661|gb|EIC01660.1| Tex-like protein [Treponema saccharophilum DSM 2985]
Length = 788
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 188/427 (44%), Gaps = 76/427 (17%)
Query: 331 WLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQL 390
W +PL + + + L I +AE E L V+I +P D +L K A +
Sbjct: 232 WDYSEPLSQVKPHRILAINRAEREGALSVSIDVPVDDAVELLK------------KKADI 279
Query: 391 WNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDND 450
N ++D L L P++V+E RS A S + + + L N + P +
Sbjct: 280 RNKYHAEAVEDGLVRLLSPAVVREIRSDEEDEADSHGIGIFSENLKNLLMTQPIK----- 334
Query: 451 ITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKND 509
RVL PG + T LD +G+ F G + Q ++
Sbjct: 335 -------GSRVLGI--DPGIRTGTKCAALDETGK-----FLGYFKIF------QVQNPDE 374
Query: 510 QERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG 568
RLL +D + VV +G S ++ ++ K++ E+ D ++
Sbjct: 375 AYRLLNDAIDKYDIQVVAVGNGTGS-----QEVQAVVSKVISENYADA-----DVKYTVV 424
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPL 628
DES +Y S +++++ P ++ A+++GR LQ+PLA + + + S +
Sbjct: 425 DESGASVYSASPVATEEFPDLDLTIRGAISMGRRLQDPLAELVKI-----DPKSIGVGLY 479
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
++ + + +++V+ V NQVG+++N A + L+++SG+ ASL + +V
Sbjct: 480 QHDVNQKKLAEQLDEVVGSVVNQVGVNLNTA-----SYMLLKYVSGIN----ASLAKKIV 530
Query: 689 R----AGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
+ G I +R+D GLG K F GFL++ S D LD+T +HPE+
Sbjct: 531 KYRDENGKIMSREDLKKVPGLGPKAFEQCAGFLKIAESA---------DPLDNTWVHPEN 581
Query: 745 YGLAQEL 751
Y +A+EL
Sbjct: 582 YDVAREL 588
>gi|160941601|ref|ZP_02088932.1| hypothetical protein CLOBOL_06501 [Clostridium bolteae ATCC
BAA-613]
gi|158435495|gb|EDP13262.1| hypothetical protein CLOBOL_06501 [Clostridium bolteae ATCC
BAA-613]
Length = 715
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 125/552 (22%), Positives = 234/552 (42%), Gaps = 98/552 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + GL +A + + +Q++ E + E+ A+ F
Sbjct: 105 KPKRRTRAMIAKEKGLEPLA-------DLISMQMTAEPV-----------EKAAAGFVSE 146
Query: 269 M--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV-STCPTPDGDSAIDSFHQ 325
S Q +QGAR + A IS R Y+R+I M+ V+ S+ S + ++
Sbjct: 147 EKGVASVQEAIQGARDILAERISDNAAFRTYIRNITMNKGVIQSSAKDEKAQSVYEMYYN 206
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVS 385
+ E+P++K + L + + E EK+L V I PE+ + K+ + D
Sbjct: 207 Y-------EEPVKKAAGHRILALNRGENEKMLTVKILAPEEQILGYLE--KQTIVRD--- 254
Query: 386 KSAQLWNDQRELILK----DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
N ILK D+ + PS+ +E RS ++ +A+ + +GK L +
Sbjct: 255 ------NPYTTPILKEAAADSYSRLIGPSIEREIRSDLTEKAEEGAIKVFGKNLEQLLMQ 308
Query: 442 GPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNV 500
P + + W P + ++DS+G+V+D +
Sbjct: 309 PPIVGR--------------VVLGWDPAFRTGCKLAVVDSTGKVLDTVVIYPTA------ 348
Query: 501 RDQQSKKNDQERLLK-FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHE 559
Q+K + ++LK F+ + ++ +G S S +II +++E V +
Sbjct: 349 --PQNKVEESRKILKDFIKKYNISLISVGNGTASRES-----EQIIVDLLKEIREQVQY- 400
Query: 560 MDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGRE 619
V +E+ +Y S++++++ P + AV++ R LQ+PL+ + + +
Sbjct: 401 ------VIVNEAGASVYSASKLATEEFPAFDVGQRSAVSIARRLQDPLSELVKI-----D 449
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRK 679
S + ++ + +E V+ D N+VG+D+N A + L+++SG+
Sbjct: 450 PKSIGVGQYQHDMNQKRLGEALEGVVEDCVNKVGVDLNTA-----SASLLEYVSGINKTL 504
Query: 680 AASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
A ++ GA +RK + LG K F GF+R+ G+ + LD T
Sbjct: 505 AKNIVAYREENGAFKSRKQLLKVAKLGPKAFEQCAGFMRI-TGGE--------NPLDGTS 555
Query: 740 IHPESYGLAQEL 751
+HPESY A +L
Sbjct: 556 VHPESYDAAGKL 567
>gi|416348672|ref|ZP_11680430.1| S1 RNA-binding domain-containing protein [Clostridium botulinum C
str. Stockholm]
gi|338196744|gb|EGO88925.1| S1 RNA-binding domain-containing protein [Clostridium botulinum C
str. Stockholm]
Length = 718
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 154/677 (22%), Positives = 281/677 (41%), Gaps = 113/677 (16%)
Query: 255 KETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
K+ EE A F K S L GA+ + A IS E RK++R N ++
Sbjct: 134 KDNIEEYAKKFINKEKEVYSEIEALNGAKDIVAEAISDEAEYRKWIREFVRKNGMIECTG 193
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + ++ ++ + + K + L I + E+EK+L ++K+ DS +K+
Sbjct: 194 SSEEPTPYEMYYNYS-------EAILKIPSHRILAINRGEKEKIL--SVKITCDS-SKII 243
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
YL+ K + + E ++D+L + PS+ +E R+ ++ + + + +
Sbjct: 244 D-----YLNRKCKKQNSITDKFIEESVEDSLKRLIYPSIEREIRAELTDKGEEGAIDVFK 298
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTG 491
L + P + K + + PG + +LD +G+++D
Sbjct: 299 ANLSALLMQAPIKGK--------------VVLGYDPGFRTGCKIAVLDDTGKLLD----- 339
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
T Q + L + + H VV LG S S E++ +++EE
Sbjct: 340 --TATVYATAPQNDVHGSIKILKELVYKHNVDVVSLGNGTASRES-----EEVLARLIEE 392
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
++ G + L V E+ +Y S +++ + P +++ A+++GR LQ+P+A +
Sbjct: 393 VKKESGKD---LFYVVVSEAGASVYSASELATKEYPDINVSIRGAISIGRRLQDPMAELV 449
Query: 612 TL----CGPGR---EILSWKLCPLENFLTPDEKY-GMIEQVMVDVTNQVGLDINLAIHRE 663
+ G G+ ++ S +L DE G++E +V N VG+D+N+A
Sbjct: 450 KIDPKSIGVGQYQHDVSSKRL---------DESLRGVVE----NVVNSVGVDLNIATP-- 494
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+ L +ISG+ A ++ G RK+ + LG K F GFLRV S
Sbjct: 495 ---SLLAYISGINSTIAKNIVEYREENGKFKNRKELLKVKRLGPKAFEQCAGFLRVTESK 551
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPD 783
+ +LD+T +HPESY +EL K I G DD ++
Sbjct: 552 E---------VLDNTSVHPESYKATKELLK------ILGYTEDDIKKGNLS--------- 587
Query: 784 LLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQD--EEF---YMISG 838
+I K RENK E+L + +D + K+P +D EE G
Sbjct: 588 ---------NIDSKVRENKLESLAEKLGVGVPTLKDIIKEIKKPGRDPREELPKPIFKKG 638
Query: 839 ETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDI 897
+ + L ++ TVR V A + G++ SD + + L D + GDI
Sbjct: 639 IVDINQLKTDMILTGTVRNVADFGAFVDIGVHQDGLVHISQLSDKFVKNPL-DIVKVGDI 697
Query: 898 LTCKIKSIQKNRYQVFL 914
+ ++ + + R ++ L
Sbjct: 698 VEVRVLEVDEKRGRISL 714
>gi|375088131|ref|ZP_09734473.1| competence protein ComEA helix-hairpin-helix repeat region
[Dolosigranulum pigrum ATCC 51524]
gi|374562961|gb|EHR34284.1| competence protein ComEA helix-hairpin-helix repeat region
[Dolosigranulum pigrum ATCC 51524]
Length = 725
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 152/660 (23%), Positives = 284/660 (43%), Gaps = 83/660 (12%)
Query: 259 EEMASNFKCAMFNSSQAV--LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
E +AS++ + ++ L GA + A +++ P RK +R + NA +++ +
Sbjct: 143 EAIASDYLNSEYDVETVADALAGAHEIIAEQVADNPEYRKRLRDYTIYNAQITSTVKNEE 202
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ F Q+ + + RK + L + + E E++L V +++ ++ ++
Sbjct: 203 IDEKNVFQQY----YEYAEDYRKIAPHRTLALNRGESEEVLTVKLEVGDERAHRYLY--- 255
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
+ + S+ + + +E I KDA F+ PS+ +E RS ++ +A++ + +G+ L
Sbjct: 256 -KQILPSLDSSSPVISIVKEAI-KDAYKRFIAPSIERELRSTLTEKAETHAIQIFGENLK 313
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLR 496
N + P ++K + D P + C ++DS+G+V+ + T
Sbjct: 314 NLLMQAPLKQK-TILGLD----PAYRSGC--------KLAVIDSTGKVLAIKVIYPHT-- 358
Query: 497 SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV 556
S + QSK E L + + +H V+ +G S S + + ++V E P
Sbjct: 359 SGETKRNQSK----EALKQLITEHAVDVIAIGNGTASRES-----EQFVAEVVSEMP--- 406
Query: 557 GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP 616
++ + + +E+ +Y S + + P + A+++ R LQ+PLA + + P
Sbjct: 407 ----EKTAFIIVNEAGASVYSASDEARREFPDLAVEERSAISIARRLQDPLAELVKI-DP 461
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
S + ++ ++ E G ++ V+ NQVG+++N A A L+ +SGL
Sbjct: 462 K----SIGVGQYQHDVSQKELEGQLDFVVETAVNQVGVNLNTA-----SGALLEHVSGLT 512
Query: 677 PRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLD 736
A ++ G TR LG K + AVGFLR+ + + D
Sbjct: 513 KTAANNIVAYRESEGQFTTRDQIKQVKRLGPKSYQQAVGFLRIPDAPEP---------FD 563
Query: 737 DTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKE 796
T IHPESY A+++ V + + + DE L+ +E + PD+ L+ +
Sbjct: 564 QTGIHPESYTEAEKILAHV--KQDKSAIGSDE--LKHLLEQL---PDIQTAEQLEIGL-- 614
Query: 797 KKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRR 856
ET I LI +D R+ P + + D L EG +Q TVR
Sbjct: 615 -------ETYRDIVAALIAPGRDARDDMPAPILSTDVLKM-----DDLREGMQLQGTVRN 662
Query: 857 VQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVC 916
V A + G++ + SD + + D + GDI+T IKSI NR ++ L
Sbjct: 663 VVDFGAFVDIGVKEDGLVHISELSDQFVEHP-KDVVQVGDIVTVWIKSIDLNRSRIGLTM 721
>gi|355681864|ref|ZP_09062152.1| hypothetical protein HMPREF9469_05189 [Clostridium citroniae
WAL-17108]
gi|354811275|gb|EHE95908.1| hypothetical protein HMPREF9469_05189 [Clostridium citroniae
WAL-17108]
Length = 714
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 124/549 (22%), Positives = 237/549 (43%), Gaps = 92/549 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC- 267
+PKR T+ + GL +A + + LQ++ KE E +A+ +
Sbjct: 105 KPKRRTRAMIAKEKGLEPLA-------DTISLQMT-----------KEPLELVAAAYISE 146
Query: 268 --AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV-STCPTPDGDSAIDSFH 324
+ +++ A+ QGA+ + A IS R Y+R+ M+ V+ S S + ++
Sbjct: 147 DKGVLSAADAI-QGAKDILAERISDNAEYRTYIRNATMNKGVIQSAAKDEKAQSVYEMYY 205
Query: 325 QFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGV 384
+ E+P++K + L + + E EK+L V I PED + L K+ + D
Sbjct: 206 NY-------EEPVKKCAGHRILALNRGENEKILTVKIAAPEDQI--LMYLEKQTIVRDNP 256
Query: 385 SKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY 444
+ L + D+ + PS+ +E RS ++ RA+ + +GK L + P
Sbjct: 257 YTTPLLKE-----VASDSYARLIGPSIEREIRSELTERAEEGAIKVFGKNLEQLLMQPPI 311
Query: 445 QRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ 503
+ + W P + ++DS+G+V+D +
Sbjct: 312 VGR--------------VVLGWDPAFRTGCKLAVVDSTGKVLDTVVIYPTA--------P 349
Query: 504 QSKKNDQERLLK-FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
Q+K + +++LK F+ + ++ +G S S +II +++E V +
Sbjct: 350 QNKVAEAKKILKDFIRKYNISLISVGNGTASRES-----EQIIVDLLKEIKEQVQY---- 400
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILS 622
V +E+ +Y S++++++ P + AV++ R LQ+PL+ + + P S
Sbjct: 401 ---VIVNEAGASVYSASKLATEEFPAFDVGQRSAVSIARRLQDPLSELVKI-DPK----S 452
Query: 623 WKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAAS 682
+ ++ + +E V+ D N+VG+D+N A + L+++SG+ A +
Sbjct: 453 IGVGQYQHDMNQKHLGETLEGVVEDCVNKVGVDLNTA-----SASLLEYVSGINKTLAKN 507
Query: 683 LQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
+ GA RK + LG K F GF+R+ G+ + LD T +HP
Sbjct: 508 IVAYREENGAFKNRKQLLKVAKLGPKAFEQCAGFMRI-AGGE--------NPLDGTSVHP 558
Query: 743 ESYGLAQEL 751
ESY +A++L
Sbjct: 559 ESYEVAKKL 567
>gi|222056100|ref|YP_002538462.1| RNA binding S1 domain-containing protein [Geobacter daltonii
FRC-32]
gi|221565389|gb|ACM21361.1| RNA binding S1 domain protein [Geobacter daltonii FRC-32]
Length = 756
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 181/847 (21%), Positives = 328/847 (38%), Gaps = 167/847 (19%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE L +EV +D L +H
Sbjct: 39 VPFIARYRKELTFEL------DEVQIRQIED-----NLAYHS------------------ 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
E E R++ + +L + +E T+ E++D L+ P
Sbjct: 70 ------------ELEERKVTVLKTIGEQGKLTPELQTRIEQTRTKTELED------LYLP 111
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK PKR TK + + GL +A G
Sbjct: 112 ----------YK-PKRRTKATIAKERGLEPLADIIAAQELTAG----------------- 143
Query: 257 TPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
TPEE A+ F + A L+GA H+ A +S + R +VR + + + + P
Sbjct: 144 TPEEAAAPFVNPDKDVADAAAALEGAGHILAERLSEDADARSFVRRVSGEQGIFCSRVAP 203
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
D + F + + ++PL+ + L +++ E+E+ L ++I P D ++ +
Sbjct: 204 DKKETVSKFEMY----YDYQEPLKTIPSHRMLAMRRGEKEEFLFLSIIAPVD---EILAG 256
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
K + K ++ E I +DA + PS+ E R RA + + +
Sbjct: 257 LKSRLI-----KGDSIFRPLLEAIAEDAYRRLVAPSIEVELRLESKNRADEAAIAVFAEN 311
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
L N + + P K RVL PG + + +D +G F G
Sbjct: 312 LKNLLLLPPAGNK------------RVLGV--DPGLRTGSKLAAVDETGR-----FLGHC 352
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
T+ + + + LL+ + HQ +V +G + T+ ++ + + E
Sbjct: 353 TIYPHT--GSGNIEPAKRELLRMIHSHQSELVAIG----NGTAGREMELFVRQTLTEAGL 406
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
R L +V +E+ +Y S I+ ++ P V+ A+++ R LQ+PLA + +
Sbjct: 407 R--------LPVVVVNEAGASVYSASDIAREEFPELDLTVRGAISIARRLQDPLAELVKI 458
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFIS 673
+ ++ +N L ++ V+ N VG+D+N A W A L ++S
Sbjct: 459 DPKSIGVGQYQHDVNQNALKKS-----LDAVVESCVNFVGVDLNTA---SW--ALLSYVS 508
Query: 674 GLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
GL +A ++ + G +R+ + G K F A GFLR+ R+G+ +
Sbjct: 509 GLNETQARAITSHRDQNGPFASRQTLLKVSRFGPKTFEQAAGFLRI-RNGE--------N 559
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH 793
LD+T +HPE+Y L +A++ L + + P ++ L R+
Sbjct: 560 PLDNTAVHPENYSLVSAMAQD----------------LSTTVADMVKEPSIVGRIDLKRY 603
Query: 794 IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQAT 853
+ + TL I EL +D R +++ + ++ I L EG ++Q T
Sbjct: 604 VTDMV---GLPTLRDIIEELKKPGRDPRAKFETATLRDDVTTIGD-----LQEGMILQGT 655
Query: 854 VRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVF 913
V V A + G++ S + E S+ + G+I+ K+ ++ R ++
Sbjct: 656 VTNVAAFGAFVDIGVHQDGLVHVSHLSRRFV-REASEAVKVGEIVKVKVLAVDLQRKRIS 714
Query: 914 LVCRESE 920
L +E+E
Sbjct: 715 LSIKEAE 721
>gi|417962445|ref|ZP_12604650.1| hypothetical protein SFB3_006G0, partial [Candidatus Arthromitus
sp. SFB-3]
gi|380337640|gb|EIA26665.1| hypothetical protein SFB3_006G0, partial [Candidatus Arthromitus
sp. SFB-3]
Length = 700
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 139/656 (21%), Positives = 271/656 (41%), Gaps = 104/656 (15%)
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR 333
Q L GA+ + + IS R ++R+ +N ++ TC D + + +++++
Sbjct: 136 QDALNGAKDIISETISDNADFRNFIRNYIFENGIIETCGESDKRTQYEGYYEYS------ 189
Query: 334 EKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE-DSLNKLFSDCKEHYLSDGVSKSAQLWN 392
+ +R + L I + E+E +L+V I E + +N +FS+ + N
Sbjct: 190 -EKVRVIPPHRILAINRGEKEGILKVKISFGESEIINMIFSNI-------------MVEN 235
Query: 393 DQ-RELILK---DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
++ ELIL+ D+L ++PS+++E R +S A+ ++ + + L + P + K
Sbjct: 236 EKCNELILEAINDSLKRLIVPSIIREIRKDLSIEAEDGAIIIFKENLKALLMQPPIKNK- 294
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
+ PG + +L +G +D S + + K
Sbjct: 295 -------------VVMAIDPGFRTGCKVCILSDTGTYLD----------STTIYPNEPVK 331
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E K + V L ++L + + EI+ +++ E ++ G + LS V
Sbjct: 332 KVEESKKKLKELIYKYNVSL--ISLGNGTASRETEEIVGEIINEVKKEKGID---LSYVI 386
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSW 623
E+ +Y S ++S + P ++ A+++GR LQ+PL + + G G+
Sbjct: 387 VSEAGASVYSASELASKEYPDLDVTIRGAISIGRRLQDPLVELVKIDPKSIGVGQYQHDI 446
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
LE L + V+ D N VG+D+N+A + L +ISG+ A ++
Sbjct: 447 NGKKLEESL---------KTVIEDCVNSVGVDLNMATP-----SILSYISGINASIAENI 492
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
+ G +R + + LG K + VGFLR+ LD+T +HPE
Sbjct: 493 VKYREENGKFKSRAELLKVKRLGNKAYEQCVGFLRISDGENG---------LDNTSVHPE 543
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKR 803
SY ++L + ++ I+ ++ ++ LD K++
Sbjct: 544 SYDATKKLL----------------NMFDLDIDDLKYHGKIVD---LDERFKKQNSFEIS 584
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQD--EEFYMISGETEDTLAEGRVVQATVRRVQGQR 861
+ L + L ++ + ++P +D E + T D L EG ++ T+R +
Sbjct: 585 KMLGIGEITLRDIIKELKKPARDPREDLPEPIFKKGVLTMDDLKEGMILVGTIRNISDFG 644
Query: 862 AICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
A + G++ K SD + L D + G+I+ K+ I K R ++ L R
Sbjct: 645 AFVDIGVHQDGLVHKSQISDKFIRHPL-DVVKLGEIVNVKVLKIDKERNRISLTMR 699
>gi|384456294|ref|YP_005668891.1| RNA-binding S1 domain-containing protein [Candidatus Arthromitus
sp. SFB-mouse-Yit]
gi|346984639|dbj|BAK80315.1| RNA-binding S1 domain-containing protein [Candidatus Arthromitus
sp. SFB-mouse-Yit]
Length = 725
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 139/656 (21%), Positives = 271/656 (41%), Gaps = 104/656 (15%)
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR 333
Q L GA+ + + IS R ++R+ +N ++ TC D + + +++++
Sbjct: 161 QDALNGAKDIISETISDNADFRNFIRNYIFENGIIETCGESDKRTQYEGYYEYS------ 214
Query: 334 EKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE-DSLNKLFSDCKEHYLSDGVSKSAQLWN 392
+ +R + L I + E+E +L+V I E + +N +FS+ + N
Sbjct: 215 -EKVRVIPPHRILAINRGEKEGILKVKISFGESEIINMIFSNI-------------MVEN 260
Query: 393 DQ-RELILK---DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
++ ELIL+ D+L ++PS+++E R +S A+ ++ + + L + P + K
Sbjct: 261 EKCNELILEAINDSLKRLIVPSIIREIRKDLSIEAEDGAIIIFKENLKALLMQPPIKNK- 319
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
+ PG + +L +G +D S + + K
Sbjct: 320 -------------VVMAIDPGFRTGCKVCILSDTGTYLD----------STTIYPNEPVK 356
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E K + V L ++L + + EI+ +++ E ++ G + LS V
Sbjct: 357 KVEESKKKLKELIYKYNVSL--ISLGNGTASRETEEIVGEIINEVKKEKGID---LSYVI 411
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSW 623
E+ +Y S ++S + P ++ A+++GR LQ+PL + + G G+
Sbjct: 412 VSEAGASVYSASELASKEYPDLDVTIRGAISIGRRLQDPLVELVKIDPKSIGVGQYQHDI 471
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
LE L + V+ D N VG+D+N+A + L +ISG+ A ++
Sbjct: 472 NGKKLEESL---------KTVIEDCVNSVGVDLNMATP-----SILSYISGINASIAENI 517
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
+ G +R + + LG K + VGFLR+ LD+T +HPE
Sbjct: 518 VKYREENGKFKSRAELLKVKRLGNKAYEQCVGFLRISDGENG---------LDNTSVHPE 568
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKR 803
SY ++L + ++ I+ ++ ++ LD K++
Sbjct: 569 SYDATKKLL----------------NMFDLDIDDLKYHGKIVD---LDERFKKQNSFEIS 609
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQD--EEFYMISGETEDTLAEGRVVQATVRRVQGQR 861
+ L + L ++ + ++P +D E + T D L EG ++ T+R +
Sbjct: 610 KMLGIGEITLRDIIKELKKPARDPREDLPEPIFKKGVLTMDDLKEGMILVGTIRNISDFG 669
Query: 862 AICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
A + G++ K SD + L D + G+I+ K+ I K R ++ L R
Sbjct: 670 AFVDIGVHQDGLVHKSQISDKFIRHPL-DVVKLGEIVNVKVLKIDKERNRISLTMR 724
>gi|253681106|ref|ZP_04861909.1| S1 RNA binding domain protein [Clostridium botulinum D str. 1873]
gi|253562955|gb|EES92401.1| S1 RNA binding domain protein [Clostridium botulinum D str. 1873]
Length = 718
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 167/756 (22%), Positives = 315/756 (41%), Gaps = 138/756 (18%)
Query: 179 ETEREVDDVDLKFNLHFPPGEVGVDEGQYK--RPKRSTKYSSCSKAGLWEVASKFGYSSE 236
E ++ +D+ LK + EV E Y+ +PK+ T+ + ++ GL +A
Sbjct: 77 EQDKLTEDLKLKIQICETLTEV---EDIYRPFKPKKRTRATIATEKGLKPLAELI----- 128
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
+ E +D E + N + +++ +A L GA+ + A IS E RK
Sbjct: 129 ----------INGEFKDNIEEYAKKFINEEKEVYSEIEA-LNGAKDIVAEAISDEAEYRK 177
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
++R N ++ + + + + ++ ++ + + K + L I + E+EK+
Sbjct: 178 WIREFVRKNGMIECTGSSEEPTPYEMYYNYS-------EAILKIPSHRILAINRGEKEKI 230
Query: 357 LQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEAR 416
L ++K+ DS +K+ YL+ K + + E ++D+L + PS+ +E R
Sbjct: 231 L--SVKITCDS-SKIID-----YLNRKCKKQNSITDKFIEESVEDSLKRLIYPSIEREIR 282
Query: 417 SLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTF 475
+ ++ + + + + L + P + K + + PG +
Sbjct: 283 AELTDKGEEGAIDVFKANLSALLMQAPIKGK--------------VVLGYDPGFRTGCKI 328
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCT 535
+LD +G+++D T Q + L + + H VV LG S
Sbjct: 329 AVLDDTGKLLD-------TATVYATAPQNDVHGSIKILKELVYKHNVDVVSLGNGTASRE 381
Query: 536 SLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKR 595
S E++ +++EE ++ G + L V E+ +Y S +++ + P +++
Sbjct: 382 S-----EEVLARLIEEVKKESGKD---LFYVVVSEAGASVYSASELATKEYPDINVSIRG 433
Query: 596 AVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKY-GMIEQVMVD 647
A+++GR LQ+P+A + + G G+ ++ S +L DE G++E +
Sbjct: 434 AISIGRRLQDPMAELVKIDPKSIGVGQYQHDVSSKRL---------DESLRGVVE----N 480
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGK 707
V N VG+D+N+A + L +ISG+ A ++ G RK+ + LG
Sbjct: 481 VVNSVGVDLNIATP-----SLLAYISGINSTIAKNIVEYREENGKFKNRKELLKVKRLGP 535
Query: 708 KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV--YNRDI-EGDL 764
K F GFLRV S + +LD+T +HPESY +EL K + DI +G+L
Sbjct: 536 KAFEQCAGFLRVTESKE---------VLDNTSVHPESYKATKELLKILGYTENDIKKGNL 586
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQY 824
+D I K RENK E+L + +D +
Sbjct: 587 SD---------------------------IDSKVRENKLESLAEKLGVGVPTLKDIIKEI 619
Query: 825 KEPSQD--EEF---YMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
K+P +D EE G + + L ++ TVR V A + G++
Sbjct: 620 KKPGRDPREELPKPIFKKGIVDINQLKTDMILTGTVRNVADFGAFVDIGVHQDGLVHISQ 679
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
SD + + L D + GDI+ ++ + + R ++ L
Sbjct: 680 LSDKFVKNPL-DIVKVGDIVEVRVLEVDEKRGRISL 714
>gi|261416587|ref|YP_003250270.1| Tex-like protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|385791439|ref|YP_005822562.1| tex protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261373043|gb|ACX75788.1| Tex-like protein protein-like protein [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302325637|gb|ADL24838.1| tex protein [Fibrobacter succinogenes subsp. succinogenes S85]
Length = 797
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 143/652 (21%), Positives = 264/652 (40%), Gaps = 110/652 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PK+ T+ + + GL E ++ ++ E G T EE+A +
Sbjct: 105 KPKKRTRATIAKELGL-EPLARLMWAQENTG----------------NTAEEIARIYLSE 147
Query: 269 M--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQF 326
+A L+GA + A E++ R+Y+R+ V+ + D + F +
Sbjct: 148 EKGLADPRAALKGAADILAEEVADNAEYRQYLRNKVEKTGVMVSKVKKDFEKQETKFKDY 207
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSK 386
+ +P+ K + L +++ E+EK+L+++I++P + + YL + V K
Sbjct: 208 ----YDFSEPVSKIPSHRMLALRRGEKEKVLRLSIEVPNEEMV--------GYLQNQVIK 255
Query: 387 SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR 446
+W E + KDA + L PSM E R L+ A+ + K L + + P
Sbjct: 256 HDSVWKPYLEDMCKDAWERLLQPSMESEVRLLLKDAAEEEAFKVFSKNLQDVLLAAPAGH 315
Query: 447 KDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS 505
K VLA PG + +LD +G+ +D +
Sbjct: 316 K------------AVLAL--DPGFRTGCKVAVLDKNGKFMD-----------HGIIKPHE 350
Query: 506 KKNDQERLLKFMMDH-QPHVVVLGAVNLSCTSLKDDIY--EIIFKMVEEHPRDVGHEMDE 562
ND+ ++M + + L A+ S + D + E+ K + P V
Sbjct: 351 PWNDKAGAAVYLMSLIDKYQIDLIAIGNGTASRETDAFCGEMALKFKGKVPPRV------ 404
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILS 622
IV E+ +Y S I+ + P + + A+++GR LQ+PLA + + + S
Sbjct: 405 --IV--SEAGASVYSASMIAIAEFPKEDVTTRGAISIGRRLQDPLAELVKV-----DPQS 455
Query: 623 WKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFISGLGPRKAA 681
+ ++ + E +++V+ N VG+D+N A APL ++GL +
Sbjct: 456 IGVGQYQHDVNQRELKKRLDEVVESCVNMVGVDVNSA------SAPLLSHVAGLSNTLSE 509
Query: 682 SLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIH 741
++ + GA +R+D G G K F A GF+R+ + LDD+ +H
Sbjct: 510 AIVKYREENGAYASREDLKKVKGFGPKAFEQAAGFMRIPGAENP---------LDDSAVH 560
Query: 742 PESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKREN 801
PE+Y L +++A++V + ++ + D +K LD + + E
Sbjct: 561 PENYALVEKMAEKV----------------GVPVKEMVGNADAVKGIKLDEFLSD---EV 601
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQAT 853
R TL I +EL +D R +++ D+ I+ + EG V
Sbjct: 602 GRATLEDILKELQKPSRDPRKEFRYAKFDDRIKTINDLVTGSWMEGVVTNVA 653
>gi|328947116|ref|YP_004364453.1| Tex-like protein [Treponema succinifaciens DSM 2489]
gi|328447440|gb|AEB13156.1| Tex-like protein [Treponema succinifaciens DSM 2489]
Length = 784
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 217/484 (44%), Gaps = 72/484 (14%)
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN-AVVSTCPTPDGDSAIDSFHQFAGVK 330
+S+ + GA+ + A ++ + R+ V S++M+ ++V+ PDG A ++ + + K
Sbjct: 171 TSEDAIAGAKDIVAERVAQDSKNRETVHSLYMETGSIVTKGIVPDGQDA-ETVEKTSTYK 229
Query: 331 --WLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
W +PL + + + L I +AE E L+VTI + D K+ + K
Sbjct: 230 MYWDYSEPLNQVKPHRILAINRAEREGALEVTISVDVDEAVKV------------IQKKY 277
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ N ++D + L P++V+E RS + A + + + L N + P +
Sbjct: 278 TINNKAFSEAIEDGVVRLLSPAVVREIRSDETDEADEHGIGIFSENLKNLLMTQPIK--- 334
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RVL PG + T LD +G+ + G ++ Q + S K
Sbjct: 335 ---------GSRVLGV--DPGIRTGTKCAALDETGK-----YLGYFLIK-QVADPEGSYK 377
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+ + K+ + VV +G S ++ I+ K++ E+ DV + ++V
Sbjct: 378 AINDAIDKYDI----QVVAVGNGTGS-----QEVQAIVSKVISENYSDVMY-----TVV- 422
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
DES +Y S I+ ++ P ++ A+++GR LQ+PLA + + + ++
Sbjct: 423 -DESGASVYSASDIAREEFPELDLTIRGAISMGRRLQDPLAELVKIDPKAIGVGLYQHDV 481
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
+ L+ +++V+ V NQVG+++N A + L+++SG+ A +
Sbjct: 482 NQKKLS-----DTLDEVVGSVVNQVGVNLNTA-----SASLLKYVSGINSSLAKKIVAYR 531
Query: 688 VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
G I +R+D GLG K F GFL++ S LD+T +HPE+Y +
Sbjct: 532 DTNGKITSREDLKKVSGLGPKAFEQCAGFLKIPESSNP---------LDNTWVHPENYEV 582
Query: 748 AQEL 751
A+E+
Sbjct: 583 AKEV 586
>gi|195444568|ref|XP_002069927.1| GK11782 [Drosophila willistoni]
gi|194166012|gb|EDW80913.1| GK11782 [Drosophila willistoni]
Length = 892
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 183/423 (43%), Gaps = 54/423 (12%)
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
++ + Q L I + E+ K L V + PE L E Y+S+G+ + +RE
Sbjct: 363 IKTIKPHQMLAINRGEKHKFLTVKVDTPEYLKRDLTRFISEQYMSEGLQ-----YPLRRE 417
Query: 397 LI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
L + L P M ++ R+ + +A+ + + K L + + P +
Sbjct: 418 CFTRALDECFTKKLQPLMCRQIRADLKEKAQKAAIEVFAKNLKQLLLMSPLK-------- 469
Query: 454 DEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERL 513
R+L PG + + S E DVL TG + +N ++K +++L
Sbjct: 470 ----GERILG--IDPGYVNGCKLAVIS--ETADVLETGVIYPHGRN----SNQKGAEKQL 517
Query: 514 LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG--DES 571
L+F+ H H++ LG +C D + + ++ + D G SI Y +E+
Sbjct: 518 LQFLNKHNCHIIALGN-GTACR----DTEQWLTRLFQSGALDSG------SIRYSIVNEN 566
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+Y S ++S + P N + AV++ R L +PL+ + + ++ E
Sbjct: 567 GASVYSCSDVASKEFPEMDTNERSAVSIARRLNDPLSEYVKIEPRHLGVGMYQHDVTEKI 626
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
LT + V+ + + VG+D+N A + L+ I+GL +KA + + G
Sbjct: 627 LTQS-----LNDVVSECVSYVGVDLNTA-----SLSVLKHIAGLSEKKAEKIIEYRTKNG 676
Query: 692 AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
+RKD ++ +G K FV GF+R+ + Q + LD T +HPESY +AQ +
Sbjct: 677 PFQSRKDLLSVRTIGDKSFVQCAGFIRIE---PLSVGGQLKNPLDCTWVHPESYQVAQTI 733
Query: 752 AKE 754
E
Sbjct: 734 IGE 736
>gi|418015666|ref|ZP_12655231.1| YhgF-like protein [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|345506001|gb|EGX28295.1| YhgF-like protein [Candidatus Arthromitus sp. SFB-mouse-NYU]
Length = 732
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 139/656 (21%), Positives = 271/656 (41%), Gaps = 104/656 (15%)
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR 333
Q L GA+ + + IS R ++R+ +N ++ TC D + + +++++
Sbjct: 168 QDALNGAKDIISETISDNADFRNFIRNYIFENGIIETCGESDKRTQYEGYYEYS------ 221
Query: 334 EKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE-DSLNKLFSDCKEHYLSDGVSKSAQLWN 392
+ +R + L I + E+E +L+V I E + +N +FS+ + N
Sbjct: 222 -EKVRVIPPHRILAINRGEKEGILKVKISFGESEIINMIFSNI-------------MVEN 267
Query: 393 DQ-RELILK---DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
++ ELIL+ D+L ++PS+++E R +S A+ ++ + + L + P + K
Sbjct: 268 EKCNELILEAINDSLKRLIVPSIIREIRKDLSIEAEDGAIIIFKENLKALLMQPPIKNK- 326
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
+ PG + +L +G +D S + + K
Sbjct: 327 -------------VVMAIDPGFRTGCKVCILSDTGTYLD----------STTIYPNEPVK 363
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E K + V L ++L + + EI+ +++ E ++ G + LS V
Sbjct: 364 KVEESKKKLKELIYKYNVSL--ISLGNGTASRETEEIVGEIINEVKKEKGID---LSYVI 418
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSW 623
E+ +Y S ++S + P ++ A+++GR LQ+PL + + G G+
Sbjct: 419 VSEAGASVYSASELASKEYPDLDVTIRGAISIGRRLQDPLVELVKIDPKSIGVGQYQHDI 478
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
LE L + V+ D N VG+D+N+A + L +ISG+ A ++
Sbjct: 479 NGKKLEESL---------KTVIEDCVNSVGVDLNMATP-----SILSYISGINASIAENI 524
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
+ G +R + + LG K + VGFLR+ LD+T +HPE
Sbjct: 525 VKYREENGKFKSRAELLKVKRLGNKAYEQCVGFLRISDGENG---------LDNTSVHPE 575
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKR 803
SY ++L + ++ I+ ++ ++ LD K++
Sbjct: 576 SYDATKKLL----------------NMFDLDIDDLKYHGKIVD---LDERFKKQNSFEIS 616
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQD--EEFYMISGETEDTLAEGRVVQATVRRVQGQR 861
+ L + L ++ + ++P +D E + T D L EG ++ T+R +
Sbjct: 617 KMLGIGEITLRDIIKELKKPARDPREDLPEPIFKKGVLTMDDLKEGMILVGTIRNISDFG 676
Query: 862 AICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
A + G++ K SD + L D + G+I+ K+ I K R ++ L R
Sbjct: 677 AFVDIGVHQDGLVHKSQISDKFIRHPL-DVVKLGEIVNVKVLKIDKERNRISLTMR 731
>gi|256545379|ref|ZP_05472742.1| S1 RNA binding domain protein [Anaerococcus vaginalis ATCC 51170]
gi|256398940|gb|EEU12554.1| S1 RNA binding domain protein [Anaerococcus vaginalis ATCC 51170]
Length = 696
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 166/769 (21%), Positives = 312/769 (40%), Gaps = 165/769 (21%)
Query: 159 TRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSS 218
T L ++L D + + +E A+T E++D+ F + KR T+
Sbjct: 72 TSLENQEKLDDELKEKIEKAKTLTELEDIYAPF-----------------KKKRKTRADK 114
Query: 219 CSKAGLWEVASKF--GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAV 276
+ GL E+ + +SE+ GL+L+ + + + +ED + N S +
Sbjct: 115 AKELGLMELLDEILMNATSEEEGLELAKKYIKEGVED------------EVDAINKSLDI 162
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP 336
L A +++ + +R + A + D D ++++ F ++
Sbjct: 163 L-------AEDVANNIEAKNIIRRDGLVRARILAEKKEDEDLIYENYYDF-------DEK 208
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
++ + Q L + +AE+ +T+KL F+D L + KS ND E
Sbjct: 209 IKNLKPFQILALNRAEKNN--DLTVKLE-------FTDNYNLTLIKNLYKSN---NDYTE 256
Query: 397 LILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDIT 452
+++ A+++ L+P++ E ++ ++ A++ + + K L + P + K+
Sbjct: 257 SLIRKAIEDSYKRLLIPTITTEIKNKLTENAENESIKVFSKNLKPYILQRPIKDKN---- 312
Query: 453 PDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQSKKND 509
PG + ++D G+ +D V++ V+ +K
Sbjct: 313 ----------IIGLDPGFRTGCKVAVIDKHGKYLDQAVIYP---------VKPHSKEKES 353
Query: 510 QERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGD 569
E L + + ++ LG S + EI+ + E+D +S +
Sbjct: 354 IEILKNLISKYDVDIIALGNATASRET------EIVV-------NKLLKEVDGVSYAIVN 400
Query: 570 ESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKL 625
E+ +Y S++ ++ P ++ AV++ R LQ+P+A + + G G+
Sbjct: 401 EAGASVYSASKLGEEEFPNLDVTIRGAVSMARRLQDPMAELVKIDPKHLGVGQYQHDINQ 460
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
L++ L+ +V+ D N+VG++IN A + L ++SGL A ++
Sbjct: 461 KKLDDELS---------KVVEDSVNEVGVNINNA-----SYKLLSYVSGLNLNLAKRIEE 506
Query: 686 SLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
+ GAI RKD GLG K + A GFLR SS F LD+T +HPESY
Sbjct: 507 DF-KNGAIKERKDLKKVKGLGDKTYKMAAGFLRF------PDSSNF---LDNTAVHPESY 556
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRET 805
+A++L YN D E DL D LE+ + ++D
Sbjct: 557 VIAKKLVD--YNLD-EIDLEKCADELEVGVLTLKD------------------------- 588
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV 865
I EL +D R++ E E I D L EG +++ TVR +
Sbjct: 589 ---IIEELKKPGRDPRDELPEVVTKSEILSI-----DDLNEGDILEGTVRNITEFGCFVD 640
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+ G+ G++ + SD + + ++ + DI+ K+ I K R ++ L
Sbjct: 641 IGVGIDGLVHISNMSDKFI-KDPNEIVTNSDIIKVKVIEIDKKRERIGL 688
>gi|291542424|emb|CBL15534.1| Transcriptional accessory protein [Ruminococcus bromii L2-63]
Length = 715
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 175/774 (22%), Positives = 318/774 (41%), Gaps = 140/774 (18%)
Query: 157 DETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRST 214
DE R ++ Q L D I+ +L+ A T E++D+ + RPKR T
Sbjct: 68 DEIRSLIDAQEKLTDEINLALDKAATLSELEDIYRPY-----------------RPKRKT 110
Query: 215 KYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF--KCAMFNS 272
+ S + GL +A+ L EK D P + A ++ + S
Sbjct: 111 RASIAKEKGLEPLANNI----------LKPEKGFD--------PSKSAVDYIDEEKGVTS 152
Query: 273 SQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV-VSTCPTPDGDSAIDSFHQFAGVKW 331
+ +QGA + A +S +RK +R++ N V VS + DS +++ +
Sbjct: 153 VEDAIQGAMDIIAELVSDNAEIRKRIRNLTNANGVLVSVATDEEKDSVYKNYYDY----- 207
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDCKEHYLSDGVSKSAQL 390
++P++K + L + + E+E L+V+++ E LN +F ++ QL
Sbjct: 208 --KEPVKKIAGHRVLAVNRGEKEGFLKVSVETDSEKPLNSIFRAM--------ITDKNQL 257
Query: 391 WNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDND 450
+D DA + PS+ +E R+ ++ A + + L + P + K
Sbjct: 258 CSDIIREACTDAYQRLIYPSIEREVRNDLTDTASENAVKVFAVNLKQLLMQPPVKGK--- 314
Query: 451 ITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKND 509
VLA PG + ++DS+G+V+D T + + + Q+SK+
Sbjct: 315 ---------TVLA--LDPGYRTGCKTAVVDSTGKVLD---TTVIYPTHSDKKIQESKQT- 359
Query: 510 QERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGD 569
LL+ + H ++ +G S + +++ E ++ H + + +
Sbjct: 360 ---LLRLIKKHHVDIISIGN---GTASKETEMF------TAETIKEADHPVYYMVV---S 404
Query: 570 ESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLE 629
E+ +Y S++++ +LP ++ AV++ R LQ+PLA + + + ++
Sbjct: 405 EAGASVYSASKLAATELPDLDLTLRSAVSIARRLQDPLAELVKIEPKAIGVGQYQ----- 459
Query: 630 NFLTPDEKYG-MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
P +K G ++ V+ D N VG D+N A A L +SGL ++
Sbjct: 460 -HDMPQKKLGETLDGVVEDCVNSVGADLNTA-----SPALLSRVSGLNATVCKNIVAYRE 513
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
GA +R + LG K F GFLRV S LD+T +HPESY A
Sbjct: 514 ENGAFSSRAELKKVPKLGPKAFEQCAGFLRVPESRNP---------LDNTGVHPESYKSA 564
Query: 749 QELAK--EVYNRDIE-GDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRET 805
+EL E +++I+ G+ +D + ++ + + D+L L T
Sbjct: 565 KELLGLLEYSDKEIKSGNFSDIQQRVKA--KGTKSLADVLGIGL--------------PT 608
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT--LAEGRVVQATVRRVQGQRAI 863
L I +EL +D R++ P M+ + D L EG ++ TVR V A
Sbjct: 609 LNDIVKELSKPGRDPRDELPAP-------MLRSDILDIKDLKEGMELKGTVRNVIDFGAF 661
Query: 864 CVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
+ G++ D + S+ L GD++ K+ S+ + ++ L R
Sbjct: 662 VDIGVHQDGLVHISQICDKYIKHP-SEVLKVGDVVNVKVLSVDPEKNRISLTMR 714
>gi|417962231|ref|ZP_12604483.1| Tex N/HHH 3/S2-domain protein [Candidatus Arthromitus sp. SFB-2]
gi|417966271|ref|ZP_12607664.1| hypothetical protein SFB5_018G9 [Candidatus Arthromitus sp. SFB-5]
gi|418373177|ref|ZP_12965268.1| Tex N/HHH 3/S2-domain protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|380330767|gb|EIA21942.1| Tex N/HHH 3/S2-domain protein [Candidatus Arthromitus sp. SFB-2]
gi|380341566|gb|EIA30040.1| Tex N/HHH 3/S2-domain protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|380343211|gb|EIA31616.1| hypothetical protein SFB5_018G9 [Candidatus Arthromitus sp. SFB-5]
Length = 718
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 139/656 (21%), Positives = 271/656 (41%), Gaps = 104/656 (15%)
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR 333
Q L GA+ + + IS R ++R+ +N ++ TC D + + +++++
Sbjct: 154 QDALNGAKDIISETISDNADFRNFIRNYIFENGIIETCGESDKRTQYEGYYEYS------ 207
Query: 334 EKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE-DSLNKLFSDCKEHYLSDGVSKSAQLWN 392
+ +R + L I + E+E +L+V I E + +N +FS+ + N
Sbjct: 208 -EKVRVIPPHRILAINRGEKEGILKVKISFGESEIINMIFSNI-------------MVEN 253
Query: 393 DQ-RELILK---DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
++ ELIL+ D+L ++PS+++E R +S A+ ++ + + L + P + K
Sbjct: 254 EKCNELILEAINDSLKRLIVPSIIREIRKDLSIEAEDGAIIIFKENLKALLMQPPIKNK- 312
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
+ PG + +L +G +D S + + K
Sbjct: 313 -------------VVMAIDPGFRTGCKVCILSDTGTYLD----------STTIYPNEPVK 349
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E K + V L ++L + + EI+ +++ E ++ G + LS V
Sbjct: 350 KVEESKKKLKELIYKYNVSL--ISLGNGTASRETEEIVGEIINEVKKEKGID---LSYVI 404
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSW 623
E+ +Y S ++S + P ++ A+++GR LQ+PL + + G G+
Sbjct: 405 VSEAGASVYSASELASKEYPDLDVTIRGAISIGRRLQDPLVELVKIDPKSIGVGQYQHDI 464
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
LE L + V+ D N VG+D+N+A + L +ISG+ A ++
Sbjct: 465 NGKKLEESL---------KTVIEDCVNSVGVDLNMATP-----SILSYISGINASIAENI 510
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
+ G +R + + LG K + VGFLR+ LD+T +HPE
Sbjct: 511 VKYREENGKFKSRAELLKVKRLGNKAYEQCVGFLRISDGENG---------LDNTSVHPE 561
Query: 744 SYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKR 803
SY ++L + ++ I+ ++ ++ LD K++
Sbjct: 562 SYDATKKLL----------------NMFDLDIDDLKYHGKIVD---LDERFKKQNSFEIS 602
Query: 804 ETLYLIRRELIHGFQDWRNQYKEPSQD--EEFYMISGETEDTLAEGRVVQATVRRVQGQR 861
+ L + L ++ + ++P +D E + T D L EG ++ T+R +
Sbjct: 603 KMLGIGEITLRDIIKELKKPARDPREDLPEPIFKKGVLTMDDLKEGMILVGTIRNISDFG 662
Query: 862 AICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
A + G++ K SD + L D + G+I+ K+ I K R ++ L R
Sbjct: 663 AFVDIGVHQDGLVHKSQISDKFIRHPL-DVVKLGEIVNVKVLKIDKERNRISLTMR 717
>gi|409122549|ref|ZP_11221944.1| RNA binding protein with S1 RNA-binding domain [Gillisia sp.
CBA3202]
Length = 707
Score = 96.7 bits (239), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 167/702 (23%), Positives = 284/702 (40%), Gaps = 164/702 (23%)
Query: 66 FLDLLHLQKLD--IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAI 123
L+ L L K D IPFIA YRKE N D+ E + I
Sbjct: 18 ILNTLSLLKEDATIPFIARYRKEAT--------------GNLDEVE----------IEKI 53
Query: 124 HDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETERE 183
DL K + L+KRK +S K ++E AL L I KS E E
Sbjct: 54 SDLLKSYDDLEKRK---KSIIKSIEDQE----------ALTDSLLAKIQKSDSMVELE-- 98
Query: 184 VDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS 243
+L+ P YK+ KR TK + +AGL +A ++
Sbjct: 99 --------DLYLP----------YKK-KRRTKAEAAREAGLEPLA------------KIM 127
Query: 244 LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM 303
+ + GD LE ++A F ++ L+ ++H+ A IS VR+ +R +F
Sbjct: 128 MSQNGDNLE-------QVAKRFLSKEIKATADALERSQHIIAEWISENTIVRQKLRRLFQ 180
Query: 304 DNA-VVSTCPTPDGDS-AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTI 361
++A + S + D+ + + Q+ W +PL++ + L I +AE E +L+V
Sbjct: 181 NSAEIASKLVKSEKDAPSAQKYKQY--FDW--SEPLKRIPSHRLLAILRAESEGILKV-- 234
Query: 362 KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN----FLLPSMVKEARS 417
KL D KE ++ + N + + DA+++ L PS E S
Sbjct: 235 --------KLEIDMKEAL--RLINNVLHVKNTSASMYIIDAIEDSYKRLLKPSFSNEVLS 284
Query: 418 LMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFV 476
+A + + + L + P K R+LA PG K V
Sbjct: 285 EAKNKADEDAIQVFAENLEQLLLAPPLGNK------------RILA--LDPGFKSGCKLV 330
Query: 477 MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTS 536
LD +G + L ++ + +K + K ++ A N+ S
Sbjct: 331 CLDENG----------MLLHNETIYPHPPQKEMTLAIKKIRS-------LVNAYNIEAIS 373
Query: 537 LKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA 596
+ + + E+ + V E+ + +E+ +Y S+I+ D+ P V+ A
Sbjct: 374 IGNGTAS---RETEQFIKKVPFN-KEVEVYVVNEAGASIYSASKIARDEFPNYDITVRGA 429
Query: 597 VALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQV 652
V++GR L +PLA + + G G+ L+N L + V+++ N++
Sbjct: 430 VSIGRRLIDPLAELVKIDAKSIGVGQYQHDVDQTKLKNKL---------DLVVMNCVNRI 480
Query: 653 GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVN 712
G+++N A +E L ++SG+GP A ++ G+I +RK+ + LG K +
Sbjct: 481 GINVNSA-SKEL----LSYVSGIGPVLAENIISYRSENGSIKSRKELLKVPRLGAKAYEQ 535
Query: 713 AVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+ GFLR++ S LDD+ +HPE Y L ++AK+
Sbjct: 536 SAGFLRIKNSKNP---------LDDSAVHPERYELVNKIAKD 568
>gi|312897937|ref|ZP_07757350.1| S1 RNA binding domain protein [Megasphaera micronuciformis F0359]
gi|310620971|gb|EFQ04518.1| S1 RNA binding domain protein [Megasphaera micronuciformis F0359]
Length = 724
Score = 96.7 bits (239), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 195/874 (22%), Positives = 343/874 (39%), Gaps = 166/874 (18%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
DL I + L LL +K IPFIA YRKE SL +EV
Sbjct: 13 DLKIKPHQVKATLHLLE-EKNTIPFIARYRKEATGSL------DEVQ------------- 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS-ISK 173
L A+ + + LL RK + E+S R Q L+ +S+
Sbjct: 53 -----LRAVQERFEYESLLADRKKTV---------EQSIR---------EQGLWTQDLSR 89
Query: 174 SLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGY 233
SLE A REV+D+ L + +PK+ TK S+ +AGL A +
Sbjct: 90 SLEKATLLREVEDLYLPY-----------------KPKKRTKASAAREAGLAPFAERMIR 132
Query: 234 SSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPC 293
+++ DP +PE +A+++ S++ + GA ++ A +S
Sbjct: 133 QNQR---------------DP--SPERVAASYVNDTVLSTEDAINGALYIIAETLSENAD 175
Query: 294 VRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEE 353
R+ +R +AV+ D D A FA K E+ + + L + + E
Sbjct: 176 CRQAIRKDLWKHAVLECSLNVDEDEA----GPFATYKDYSER-ISLMPSHRILAVTRGES 230
Query: 354 EKLLQVTIKLPEDSLNKLFSDCKEHY--LSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
K+L+V +L +D + H LS + + + D+ + P +
Sbjct: 231 LKILKV----------RLQADHEAHIERLSRQLITGPSPYTSLLKAAATDSYKRLIFPQL 280
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-K 470
+E R+ + R + + + + L + + P+ ++ PG +
Sbjct: 281 EREIRNELFERGEKQAITIFSENLRSLLMQPPFTQQT--------------ILGLDPGYR 326
Query: 471 PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAV 530
++D +G V+D + C+ S+ Q+S D L +F+ + +++ +G
Sbjct: 327 TGCKAAVIDPTGNVLD--YGTCMLTGSEK---QKSLAADT--LTRFIKTYGVNLISIG-- 377
Query: 531 NLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQK 590
N + + + + +G S + +ES +Y S ++ +LP
Sbjct: 378 NGTASYETEQFVSAL----------IGDRKLPCSYIITNESGASVYSASDLARAELPDLD 427
Query: 591 GNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTN 650
++ AV++ R +Q+PLA + + ++ + LT ++ ++ V N
Sbjct: 428 VTIRGAVSIARRIQDPLAEFIKIDPKSIGVGQYQHDVNQKKLT-----SALDDIVESVVN 482
Query: 651 QVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVF 710
+VG+D+N A A LQ ISGL A ++ G +RK+ LG F
Sbjct: 483 RVGVDLNTASQ-----ALLQHISGLTAATAGNIVAYRNTNGPFHSRKELKKIPRLGAATF 537
Query: 711 VNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA 770
GFLR++ D LD+T +HPESY L +++A Y + DL D
Sbjct: 538 TQCAGFLRIKDG---------TDPLDNTSVHPESYNLTKKIAAH-YGFSLH-DLKD---- 582
Query: 771 LEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
EM ++ ++ K D I + T+ I EL +D R+ +P
Sbjct: 583 -EMHLDDLKK-----KVQESDAAILAPLLDAGEPTIRDIISELRKPGRDIRSDLPQPLTR 636
Query: 831 EEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSD 890
++ + D L G VV+ TV+ V A AG++ + + S L D
Sbjct: 637 KKLMSL-----DELQVGTVVKGTVQNVVDFGAFVDFGLKTAGLIHRSELSTRPFKHPL-D 690
Query: 891 KLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN 924
LH GDI+ +I ++ + ++ L + E N
Sbjct: 691 ILHTGDIVEAQIIGVEAKKNRIALSIKALEKVKN 724
>gi|350272165|ref|YP_004883473.1| putative transcription accessory protein [Oscillibacter
valericigenes Sjm18-20]
gi|348597007|dbj|BAL00968.1| putative transcription accessory protein [Oscillibacter
valericigenes Sjm18-20]
Length = 720
Score = 96.7 bits (239), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 139/590 (23%), Positives = 244/590 (41%), Gaps = 85/590 (14%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
+++ L GA + A IS + VRK +R + AV+ + D D+ ++ FA
Sbjct: 152 VETAEDALAGASDIVAEAISDDAEVRKSLRGFILRQAVLRSEAATDEDTVYRLYYDFA-- 209
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ 389
+ + + + Q L + + E E L+V ++L ++ + L G + +A
Sbjct: 210 -----QSVSRMQGHQILAVNRGEREGKLKVGLELDREAA---LVTLRRQVLRPGSAANAF 261
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN 449
+ DA D L PS+ +E R+L++ A + ++ L + P + K
Sbjct: 262 VRAAA-----DDAWDRLLFPSLEREIRNLLTDHASEGAIGQFALNLKPLLMQPPVKGK-- 314
Query: 450 DITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
+ PG + ++D +G+V+D T ++ K
Sbjct: 315 ------------VTMGLDPGYRNGCKVAVIDGTGKVLD-------TAVVYPTYGERQKNE 355
Query: 509 DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG 568
+L + H + +G S + +M E + +G LS +
Sbjct: 356 AINKLAGMAVSHDVEHIAIGNGTASRET---------EQMAVELIQKLGAMGRNLSYMIV 406
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL-CP 627
E+ +Y S+++S++ P N++ AV++ R LQ+PLA + + + ++ CP
Sbjct: 407 SEAGASVYSASKLASEEFPQYDVNLRSAVSIARRLQDPLAELVKIDPKAIGVGQYQHDCP 466
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
+ DE G + + V N VG+D+N A + L +++GL A ++ +
Sbjct: 467 QKRL---DEALGGVVEGCV---NAVGVDVNTA-----SPSLLGYVAGLNGTTAKNVVKYR 515
Query: 688 VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
GA TRK + LG K F GFLRV SG ++LD+T +HPESY
Sbjct: 516 EENGAFTTRKQILKVPKLGPKAFEQCAGFLRVPESG---------NVLDNTAVHPESYAA 566
Query: 748 AQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLY 807
A+ L ++ G DD + ++ +D PD LK Y +R E TL
Sbjct: 567 AERLL------ELTGYTIDDVKSGKL-----QDLPDRLKAYGEERAAAECG--VGVPTLA 613
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
+ EL +D R++ +P + E +D L G V+ TVR V
Sbjct: 614 DVAAELQKPGRDPRDELPKPVLRTDVM----EMKD-LRPGMVLTGTVRNV 658
>gi|240146571|ref|ZP_04745172.1| protein YhgF [Roseburia intestinalis L1-82]
gi|257201302|gb|EEU99586.1| protein YhgF [Roseburia intestinalis L1-82]
gi|291540980|emb|CBL14091.1| Transcriptional accessory protein [Roseburia intestinalis XB6B4]
Length = 752
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 121/551 (21%), Positives = 236/551 (42%), Gaps = 96/551 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL +A G + Q+ L SLE+ ++ DP++
Sbjct: 142 KPKRRTRATIAKEKGLEPLA---GIITLQM-LNTSLEEEAEKFVDPEKE----------- 186
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSAIDSFHQFA 327
S++ + GA+ + A IS E R +R + + ++S P+ +S + +++F
Sbjct: 187 -VTSAEDAIAGAKDIIAESISDEADYRSRIRDLTVKKGRMISAAKDPEAESVYEMYYEF- 244
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
++P+ K + L + + E EK L V I+ P + + + K+ + D +
Sbjct: 245 ------DEPVAKLAGHRILALNRGENEKFLTVKIEAPVEDILRYLE--KKVIVRDNPQTT 296
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
L +++DA D + P++ +E RS ++ +A+ + +GK L + P
Sbjct: 297 PVLKE-----VIEDAYDRLIAPAIEREIRSDLTEKAEDGAIKVFGKNLEQLLMQPPI--- 348
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQ 504
A VL W P + ++D +G+V+D V++ Q
Sbjct: 349 ---------AGQVVLG--WDPAFRTGCKLAVVDPTGKVLDTTVIYPTA----------PQ 387
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
+K + + +LK ++ H+ ++ N + + + ++I ++++E P V +
Sbjct: 388 NKVEEAKAVLKKLISKY-HITLISLGNGTASRESE---QVIVELLKEIPVKVQY------ 437
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREI 620
+ +E+ +Y S++++++ P + A ++ R LQ+PLA + + G G+
Sbjct: 438 -IIVNEAGASVYSASKLATEEFPQFDVGQRSAASMARRLQDPLAELVKIDPKSIGVGQYQ 496
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
L L G++E D N+VG+D+N A + L++ISG+ A
Sbjct: 497 HDMNQKKLSEALG-----GVVE----DCVNRVGVDLNTA-----SASLLEYISGISKAVA 542
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ G R + LG K + GFLR+ LD T +
Sbjct: 543 KNIVAYREENGRFEARNQLLKVAKLGPKAYEQCAGFLRINDGKNP---------LDATGV 593
Query: 741 HPESYGLAQEL 751
HPESY A+ L
Sbjct: 594 HPESYAAAKTL 604
>gi|422939823|ref|ZP_16967194.1| S1 RNA binding domain protein [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339890807|gb|EGQ79877.1| S1 RNA binding domain protein [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 760
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 166/764 (21%), Positives = 317/764 (41%), Gaps = 142/764 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 118 KLTEELRNSIIEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 160
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y+ L E + +A +F + + ++GA + A
Sbjct: 161 PLAEKF-YTVNSL-----------------EEIQNLAKDFITEEVLTVEDAIEGAMLIIA 202
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + + D + +++++ + + K
Sbjct: 203 QNISEKAEYRERIREIYLKYSIIESKASKKATELDEKKVYNDYYEYS-------EKVEKM 255
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD--CKEHYLSDGVSKSAQLWNDQRELI 398
+ L + + E+E +L V ++L EDS + + +E +D V + I
Sbjct: 256 PSHRILALNRGEKEDILTVHLRL-EDSDRERIENMILREFPKNDLVETYKE--------I 306
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEA 457
+KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 307 IKDSLDRLIVPSIEREVRNALTERAEIESITVFKDNLKNLLLQAPLKEKNVLALDPGYRT 366
Query: 458 APRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF 516
+V +G + T F ++++ N R Q ++ + LK
Sbjct: 367 GCKVAVIDKYGFYRENTVFFLVEAM----------------HNPRQIQDARD---KFLKL 407
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
+ + +V +G S + + + + +++E +V + + +E+ +Y
Sbjct: 408 VKKYNIDIVSIGN---GTASRETETF--VANIIKEEKLNVKY-------LIVNEAGASVY 455
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFL 632
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 456 SASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL 515
Query: 633 TPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA 692
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 516 ---------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVDYRKENGN 561
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK+ + G+G K + GFL V G+ ++LD+T IHPESYG+A+ +
Sbjct: 562 FKNRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYGIAEAIL 612
Query: 753 KEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RETLYLIR 810
G + D + + R++ LK++ K+ EN ET +
Sbjct: 613 ---------GKIGFDLEKYNSELNEAREK---LKSF----DYKKFAEENSFGLETTKDVY 656
Query: 811 RELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGL 870
L+ +D R+ +++P + I D L G ++ TVR V A +
Sbjct: 657 EALLKERRDPRDDFEKPLLKSDILNI-----DNLQVGMELEGTVRNVVKFGAFIDIGLKN 711
Query: 871 AGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+L + SD + D S L G I+ KIK + K+R +V L
Sbjct: 712 DALLHVSEISDKYIDDP-SKVLSVGQIIKVKIKDVDKDRGRVGL 754
>gi|336436007|ref|ZP_08615720.1| hypothetical protein HMPREF0988_01305 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008047|gb|EGN38066.1| hypothetical protein HMPREF0988_01305 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 716
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 158/689 (22%), Positives = 281/689 (40%), Gaps = 158/689 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL ND+ R K H+ L + +L+ +K+
Sbjct: 31 IPFISRYRKEATGSL-------------NDEQLR----KLHERLLYLRNLE------EKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L S EE ++ +E L Q+ AAET V+D L+ P
Sbjct: 68 EQVLSSI------EEQGKLTEE----LKAQIL--------AAETLVVVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL ++ + L++ EK E ++ K
Sbjct: 104 -----------YRPKRRTRATIAKEKGLEPLSVLIMLQQTKEPLEVEAEKYISEEKEVK- 151
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
S++ L GA + A IS E R ++R M ++S +
Sbjct: 152 ---------------SAKEALSGAMDIIAESISDEADYRSWIRKQTMQKGKIISAAKDAE 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + +++F E+P+ K + L + + E+EK L V I+ PE+ + +
Sbjct: 197 AESVYEMYYEF-------EEPIGKLAGHRILALNRGEKEKFLTVKIEAPEEDILR----- 244
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEY 431
YL V + N +LKD +++ + P++ +E R+ ++ +A+ + +
Sbjct: 245 ---YLEKQVIRRD---NPYTRPVLKDVVEDSYKRLIAPAIEREIRNELTEKAEDGAIEVF 298
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFT 490
GK L + P + + W P + ++D +G+V+
Sbjct: 299 GKNLHQLLMQPPITGR--------------VVLGWDPAFRTGCKLAVVDETGKVL----- 339
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
G + K ++ L K + + ++ LG S S + I ++++
Sbjct: 340 GTTVIYPTAPTTPAKIKASKDLLKKIIPKYHVSLISLGNGTASRES-----EQFIVELLK 394
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E P +V + V +E+ +Y S+++S++ P + A ++ R LQ+PLA +
Sbjct: 395 EIPDNVQY-------VIVNEAGASVYSASKLASEEFPKFDVGQRSAASIARRLQDPLAEL 447
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L L G++E D N+VG+D+N A
Sbjct: 448 VKIDPKSIGVGQYQHDMNQKKLGESLN-----GVVE----DCVNKVGVDLNTA------S 492
Query: 667 AP-LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
AP L +ISG+ A ++ G +RK+ + LG K F GF+R+ + G+
Sbjct: 493 APLLSYISGISSAIAKNIVAYREENGRFASRKELLKVAKLGPKAFEQCAGFMRI-QGGE- 550
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+ LD T +HPESY A++L K+
Sbjct: 551 -------NPLDGTGVHPESYEAAEKLLKK 572
>gi|340754218|ref|ZP_08690980.1| transcription accessory protein [Fusobacterium sp. 2_1_31]
gi|229423743|gb|EEO38790.1| transcription accessory protein [Fusobacterium sp. 2_1_31]
Length = 722
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 163/773 (21%), Positives = 325/773 (42%), Gaps = 152/773 (19%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L D + S+ A+ +EV+D+ +FP R K+ TK + GL
Sbjct: 80 KLTDELRNSIVEAKILQEVEDI------YFP-----------YRKKKKTKADIAKERGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A KF Y+ L E + +A +F + + ++GA + A
Sbjct: 123 PLAEKF-YTVNNL-----------------EEIQNLAKDFITEEVPTVEDAIEGAMLIIA 164
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP-----DGDSAIDSFHQFAGVKWLREKPLRKF 340
IS + R+ +R I++ +++ + D + +++++ + + K
Sbjct: 165 QNISEKAEYRERIREIYLKFSIIEAKASKKAAELDEKKVYNDYYEYS-------EKIDKM 217
Query: 341 EDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC-KEHYLSDGVSKSAQLWNDQRELIL 399
+ L + + E+E +L V ++L + K+ + KE +D V+ + I+
Sbjct: 218 ASHRILAVNRGEKEDILTVHLRLEDSDREKIENMILKEFPKNDLVATYKE--------II 269
Query: 400 KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN-DITPDEEAA 458
KD+LD ++PS+ +E R+ ++ RA+ + + L N + P + K+ + P
Sbjct: 270 KDSLDRLIIPSIEREVRNALTERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRTG 329
Query: 459 PRVLAC-CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFM 517
+V +G + T F ++++ + + + ++ +++ L +
Sbjct: 330 CKVAVIDKYGFYRENTVFFLVEA-------------------MHNPKQIEDAKKKFLALV 370
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
++ +V +G S + + + + +++E+ ++ + + +E+ +Y
Sbjct: 371 KKYEIDIVSIGN---GTASRETETF--VANIIKENKLNLKY-------LIVNEAGASVYS 418
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLT 633
S+I++++ P V+ A+++GR +Q+PLA + + G G L+ L
Sbjct: 419 ASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQSKLDESL- 477
Query: 634 PDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAI 693
+ V+ V N VG +IN A W A L ISG+ A ++ G
Sbjct: 478 --------DNVISHVVNNVGANINTA---SW--ALLSHISGIKKTVAKNIVEYRKENGNF 524
Query: 694 FTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
RK+ + G+G K + GFL V G+ ++LD+T IHPESY +A+ L +
Sbjct: 525 KNRKEILKVKGVGPKAYEQMAGFL-VIPEGE--------NILDNTVIHPESYAIAEALLE 575
Query: 754 EV------YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK--RET 805
++ YN +LN+ R+R LK++ K+ EN ET
Sbjct: 576 KIGFSLEKYN----NELNE-----------ARER---LKSF----DYKKFAEENNFGAET 613
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV 865
+ + L+ +D R+ +++P + I D L G ++ TVR V A
Sbjct: 614 VKDVYEALLKDRRDPRDDFEKPLLKSDILNI-----DNLEVGMELEGTVRNVVKFGAFVD 668
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
+ +L + S+ + D S L G I+ +IK + K+R +V L +E
Sbjct: 669 IGLKNDALLHISEISNKYIDDP-SKVLAVGQIIKVRIKDVDKDRGRVGLTKKE 720
>gi|323486378|ref|ZP_08091703.1| hypothetical protein HMPREF9474_03454 [Clostridium symbiosum
WAL-14163]
gi|323694998|ref|ZP_08109145.1| YhgF [Clostridium symbiosum WAL-14673]
gi|355624987|ref|ZP_09047971.1| hypothetical protein HMPREF1020_02050 [Clostridium sp. 7_3_54FAA]
gi|323400360|gb|EGA92733.1| hypothetical protein HMPREF9474_03454 [Clostridium symbiosum
WAL-14163]
gi|323500942|gb|EGB16857.1| YhgF [Clostridium symbiosum WAL-14673]
gi|354821632|gb|EHF06017.1| hypothetical protein HMPREF1020_02050 [Clostridium sp. 7_3_54FAA]
Length = 713
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 147/683 (21%), Positives = 285/683 (41%), Gaps = 150/683 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ND+ R +LD++
Sbjct: 31 IPFIARYRKEATGSL-------------NDEVLR--------------NLDERL------ 57
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
Y + EE ++ + R ++L + K + AA T V+D+ L +
Sbjct: 58 ------KYLRNLEERKEQVINSIRE--QEKLTPELEKKILAASTLVAVEDLYLPY----- 104
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ S + GL +A+ + +QL+ + E
Sbjct: 105 ------------RPKRKTRASIAKEKGLEPLAN-------LVLMQLTKTPLLKE------ 139
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR-SIFMDNAVVSTCPTPD 315
E S K + +++ L GA+ + A I+ R Y+R + F + ++ S+ +
Sbjct: 140 -AEHYISEEKGVL--TAEEALNGAKDILAERIAETAEYRTYIRKATFQEGSLDSSARDGN 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + ++ F +P++K + L + + E+EK+L V I PE+ K+
Sbjct: 197 AESVYEMYYNFT-------EPVKKAAGHRILALNRGEKEKILTVKITAPEE---KILRYL 246
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
++ ++ ++A++ + + +D+ + P++ +E RS ++ A++ + +GK L
Sbjct: 247 EKKVITRENPETARVLRE----VTEDSYKRLISPAIEREIRSELTENAEAGAIKVFGKNL 302
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ P + + W P + ++D +G+V+D +
Sbjct: 303 EQLLMQPPITGR--------------VVLGWDPAFRTGCKLAVVDGTGKVLDTVVIYPTA 348
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
Q+K + +++LK ++ + V L +V S + + +II +++E
Sbjct: 349 --------PQNKVEESKKILKNLITK--YGVSLISVGNGTASRESE--QIIVGLLKEIKE 396
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
V + + +E+ +Y S++++++ P + AV++ R LQ+PLA + +
Sbjct: 397 QVQY-------IIVNEAGASVYSASKLATEEFPNFDVGQRSAVSIARRLQDPLAELVKID 449
Query: 614 ---CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
G G+ L L G++E D N+VG+D+N A + L+
Sbjct: 450 PKSIGVGQYQHDMNQKNLSEALQ-----GVVE----DCVNKVGVDLNTA-----SASLLE 495
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
+ISG+ A ++ G +R++ + LG K F GF+R+ + G+
Sbjct: 496 YISGINKTIAKNIVSYREENGVFESRRELLKVAKLGPKAFEQCAGFMRI-QGGK------ 548
Query: 731 FIDLLDDTRIHPESYGLAQELAK 753
+ LD T +HPESY A+ L K
Sbjct: 549 --NPLDTTSVHPESYKAAEALLK 569
>gi|163816329|ref|ZP_02207695.1| hypothetical protein COPEUT_02516 [Coprococcus eutactus ATCC 27759]
gi|158448326|gb|EDP25321.1| Tex-like protein N-terminal domain protein [Coprococcus eutactus
ATCC 27759]
Length = 715
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 186/852 (21%), Positives = 350/852 (41%), Gaps = 187/852 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE +L ND+ RT H+ L + +L+ K+
Sbjct: 31 IPFIARYRKEATGAL-------------NDEQLRT----LHERLTYLRNLE------DKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ S EE ++ E R +EAAET VDD L+ P
Sbjct: 68 AQVIASI------EEQGKLTPELR------------AEIEAAETMVLVDD------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + GL +A+ + LQ++ + E E
Sbjct: 104 -----------YRPKRKTRATVAKDKGLEGLAN-------IISLQMTSTPIRTEAEKYVS 145
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV-STCPTPD 315
T + + + + GA + A IS R +R + + +T PD
Sbjct: 146 TEKGV---------ETVDDAISGAMDIIAENISDTADYRTKIRDLTTKKGFINTTAKDPD 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + ++ F+ P+ K + L I + E+EK + V I+ P D ++ S
Sbjct: 197 AESVYEMYYNFSA-------PISKMTGYRTLAINRGEKEKFITVKIEAPVD---EIISYL 246
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
++ ++ S ++++ ++ ++ D+ + P++ +E R+ ++ A+ + + L
Sbjct: 247 RKKIIARDNSDTSEILDN----VIDDSYSRLIAPAIEREIRNSLTESAEDGAIKVFASNL 302
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGC 492
+ P A VL W P + ++D +G+V+D V+F
Sbjct: 303 QQLLMQPPI------------AGKTVLG--WDPAFRTGCKLAVVDPTGKVLDTVVIFPTA 348
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
Q+K + ++ +K ++ + + + L +V S + ++ +I +++ E
Sbjct: 349 ----------PQNKVAEAKKTVKALI--KKYGISLISVGNGTASRESEM--VIAELISEL 394
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
V + V +E+ +Y S++++++ P + A ++ R +Q+PLA +
Sbjct: 395 DTPVQY-------VITNEAGASVYSASKLATEEFPNFDVGQRSAASIARRVQDPLAELVK 447
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ ++ + + ++ V+ D N+VG+D+N A AP
Sbjct: 448 IDPKAIGVGQ---------YQHDMNQKKLAEALDAVVEDSVNKVGVDLNTA------SAP 492
Query: 669 L-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L + ISG+ A ++ G TRK+ + LG K F GF+R+
Sbjct: 493 LMEHISGINKTLAKNIVDYRETNGRFTTRKELLKVAKLGPKAFEQCAGFMRI-------- 544
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV-YNRD--IEGDLNDDEDALEMAIEHVRDRPDL 784
S + LD T +HPESY LA L + + Y+ D +G+L + L A +V+ +
Sbjct: 545 -SDGKNPLDATSVHPESYDLATALLEHLGYSSDDISKGNLKE----LSKAAGNVKKLAEE 599
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT- 843
L T ++ TL I +EL +D R++ +P ++ G+ +
Sbjct: 600 LGTGII--------------TLTDIIKELEKPARDPRDEMPKP-------ILRGDVLEMK 638
Query: 844 -LAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKI 902
L EG +++ TVR V A + G++ + S+ + L D + GDI+ K+
Sbjct: 639 DLTEGMILKGTVRNVIDFGAFVDIGVHQDGLVHISEMSNKFIKHPL-DVVSVGDIVQVKV 697
Query: 903 KSIQKNRYQVFL 914
I N+ ++ L
Sbjct: 698 IGIDLNKKRIQL 709
>gi|300769925|ref|ZP_07079804.1| YhgF like protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300762401|gb|EFK59218.1| YhgF like protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 745
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 165/719 (22%), Positives = 277/719 (38%), Gaps = 174/719 (24%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
++LSIS + ++LL + +PFIA YRKE SL +EV
Sbjct: 8 SNELSISDRQVRTTIELLD-EGATVPFIARYRKEMTGSL------DEVQ----------- 49
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLA--LNQQLFDS 170
+ I D ++ L+KRK A+ + I ++ +L L QQ+
Sbjct: 50 -------ITTIRDRIQQLRELEKRKEAVL-----------KSITEQGKLTPELEQQIL-- 89
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
AAET ++D+ L + +PKR T+ S + GL +A +
Sbjct: 90 ------AAETMASLEDIYLPY-----------------KPKRKTRASIAREKGLQPLADQ 126
Query: 231 F----GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAV 286
G E L L E+ G S + L GAR + A
Sbjct: 127 ILLQDGKDFETLAASLIDEEKG---------------------VQSVEDALAGARDIIAE 165
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWL 346
I+ + VR R IF++ + P + A + + +W + L+ + L
Sbjct: 166 TIAEDANVRARSRKIFLEKGQFVSRVVPGKEEAAQKYKDY--FEW--SESLKDAPSHRVL 221
Query: 347 LIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+++ E+E+LL + I++ E+ + Y+ K+A Q + L D+
Sbjct: 222 AMRRGEKEELLYLDIEVAEEEVVPAIDTL---YI-----KAANPAATQVRMALLDSYKRL 273
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
L PSM E R L RA + + + + P +K R+LA
Sbjct: 274 LKPSMETEIRVLTRQRADEEAIKVFADNVRQLLLAAPLGQK------------RLLAI-- 319
Query: 467 GPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
PG TGC T+ V D+Q + + PH
Sbjct: 320 DPG------------------FRTGCKTV----VLDEQGTLLENTAIF-------PHTGA 350
Query: 527 LGAVNLSCTS----LKDDIYEIIF------KMVEEHPRDVGHEMDELSIVYGDESLPRLY 576
A + T K DI I + EE R + + ++++V +ES +Y
Sbjct: 351 GAAAEAAKTVEHLVKKYDIQAIAIGNGTAGRETEEFVRKLN--IPDITLVMVNESGASIY 408
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDE 636
S + ++ P V+ AV++GR L +PLA + + + ++ +N L
Sbjct: 409 SASETAREEFPDHDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKLQ--- 465
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTR 696
++ ++ N VG+++N A + L ++SGLGP A + V GA +R
Sbjct: 466 --TALDDTVISCVNAVGVELNTASKQ-----ILAYVSGLGPSLAQQIVNYRVANGAFKSR 518
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
K+ LG K F A GFLR+R + LD + +HPE Y + +++AK++
Sbjct: 519 KELKKVPRLGDKAFEQAAGFLRIRNAENP---------LDASAVHPERYSVVEKMAKDL 568
>gi|227486765|ref|ZP_03917081.1| S1 domain RNA-binding protein [Anaerococcus lactolyticus ATCC
51172]
gi|227235235|gb|EEI85250.1| S1 domain RNA-binding protein [Anaerococcus lactolyticus ATCC
51172]
Length = 697
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 154/724 (21%), Positives = 302/724 (41%), Gaps = 149/724 (20%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKF--GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
+ +R T+ + GL E +K SSE LQ ++ + + LED K+
Sbjct: 105 KSRRKTRADIARELGLEEFLTKLLTEISSEDEALQAAVSYIKEGLEDEKD---------- 154
Query: 267 CAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQF 326
V+ + + A +I+ R +R A + T + DS+ +S+H F
Sbjct: 155 ---------VISRSLDILAEDIANTIDARNIIRRDGFLRASLITSLKAEEDSSYESYHDF 205
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSK 386
+ K L+ + Q L I +AE+E +L V I+ FSD L +
Sbjct: 206 S-------KKLKDLKSFQILAINRAEKEDILNVKIE---------FSDAYNKSLIYKLVS 249
Query: 387 SAQLWND-QRELI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
+ +N Q+EL+ + DA ++PS+ E R+ ++ A + +G L +
Sbjct: 250 DGKNFNPYQKELVNLTIDDAYKRLMVPSITTELRNKLTEEASDESIRVFGNNLKPYLLQR 309
Query: 443 PYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVR 501
P + + + PG + ++D +G+ +D +
Sbjct: 310 PLKGQ--------------VVMGLDPGFRTGCKVAVVDKNGKYLD----------QAVIY 345
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
+ K ++E + + + V L A+ + S + ++ ++ K+++E +D
Sbjct: 346 PVEPHKKEKEAIATLKALIKKYGVTLIALGNATASRETEL--VVDKLIKE--------VD 395
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
+S +E+ +Y S + ++ P ++ A+++ R LQ+P+A + + G G
Sbjct: 396 GVSYAIVNEAGASVYSASSLGEEEFPDLDVTIRGAISMARRLQDPMAELVKIEPKHIGVG 455
Query: 618 R---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
+ ++ S KL DE+ + +V+ D N+VG+ IN A + L ++SG
Sbjct: 456 QYQHDLDSKKL---------DEE---LSKVVEDAVNEVGVAINNA-----SYKLLSYVSG 498
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L A ++ + G + RKD + GLGKK + A GFLR S + +
Sbjct: 499 LNQNLAKRIEEDF-KEGKLVYRKDLLDVKGLGKKTYELAAGFLRFPSSPE---------I 548
Query: 735 LDDTRIHPESYGLAQELAKEVYNRDIEG-DLNDDEDALEMAIEHVRDRPDLLKTYLLDRH 793
LD+T +HPESY ++AK++ + D++ D+ + LE+ I ++D +
Sbjct: 549 LDNTAVHPESY----KIAKKIQDLDLDKIDIEKVAEELEVGIPTLKD---------IIAE 595
Query: 794 IKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQAT 853
+K+ R+ + + ++ ++ I G D L G V++
Sbjct: 596 LKKPGRDPREDNPEVLTKKEIMGIDD------------------------LKVGMVLKGK 631
Query: 854 VRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVF 913
VR + A + G+ G++ + SD + + D+L +++ +I I K + ++
Sbjct: 632 VRNITDFGAFVDIGVGIDGLVHVSEISDKFVKNP-HDELTNSQVVSVRIIEIDKKKERIG 690
Query: 914 LVCR 917
L R
Sbjct: 691 LSMR 694
>gi|424828127|ref|ZP_18252868.1| RNA-binding protein [Clostridium sporogenes PA 3679]
gi|365979610|gb|EHN15663.1| RNA-binding protein [Clostridium sporogenes PA 3679]
Length = 718
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 239/532 (44%), Gaps = 77/532 (14%)
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP 336
LQGA + + IS E RK++R+ + V+ T + + ++ + ++
Sbjct: 158 LQGAMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESKEPTPYEMYYDY-------KEN 210
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
++ + L I + E+EK+L V + ED K+ K L +K+ ++ ++
Sbjct: 211 VKNIPPHRILAINRGEKEKILTVKVTCNED---KIIDYLKSRSLKG--NKATDIYIEES- 264
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+KD+L + PS+ +E RS ++ + + + + + L + P + K
Sbjct: 265 --VKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAPIKDK--------- 313
Query: 457 AAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLK 515
+ + PG + +LD +G+++D T + + + S K +E + K
Sbjct: 314 -----VVLGYDPGFRTGCKIAVLDETGKLLD---TATVYATAPQNDVEGSVKILKELIYK 365
Query: 516 FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRL 575
+ +D V+ LG S S E+I KM++E + G + + V E+ +
Sbjct: 366 YDVD----VISLGNGTASRES-----EEVIAKMLKEIKEEKGKD---IYYVIVSEAGASV 413
Query: 576 YENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENF 631
Y S++++++ P +++ A+++GR LQ+PLA + + G G+ L+
Sbjct: 414 YSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLDES 473
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L G++E D N VG+D+N A + L +ISG+ A ++ G
Sbjct: 474 LK-----GVVE----DCVNAVGVDLNTATP-----SLLSYISGINSSIAKNIVAYREEVG 519
Query: 692 AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY-GLAQE 750
RK+ + LG+K F GFLRV S + LD+T +HPESY G +
Sbjct: 520 KFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEP---------LDNTGVHPESYEGTKKF 570
Query: 751 LAKEVYN-RDIEGDLNDDEDAL--EMAIEHVRDRPDLLKTYLLDRHIKEKKR 799
L Y+ +D++ + D DA + I+ + D+ D+ K LLD IKE K+
Sbjct: 571 LNLLEYDIKDVKNNKLQDIDARISNIGIDTICDKIDIGKLTLLD-IIKEIKK 621
>gi|306820494|ref|ZP_07454127.1| YhgF like protein [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551408|gb|EFM39366.1| YhgF like protein [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 714
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 167/765 (21%), Positives = 316/765 (41%), Gaps = 144/765 (18%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L D+I SLE A T +EV+D+ + P +K+ KR T+ S + GL
Sbjct: 79 KLTDNIRASLEDAMTLQEVEDI-------YAP---------FKQKKR-TRASVAKEKGL- 120
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMF--NSSQAVLQGARHM 283
E L L L LE + E E+ A F A + + + GA+ +
Sbjct: 121 ----------EALSLVL-LEGI--------EKVEDKAGEFINAELGVENEKDAIDGAKDI 161
Query: 284 AAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID-----SFHQFAGVKWLREKPLR 338
A I+ + ++K +R + D AV+ T D + D + +F+ +
Sbjct: 162 VAEVIADDFELKKTLRKLLFDTAVIMTSAKKDAEEKEDYPVYKMYMEFSEIS-------S 214
Query: 339 KFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
K + L I + E++ +L+V I K K Y+ + + ++ D
Sbjct: 215 KMPSYRILAINRGEKDDILKVKIDY---DFEKFVEIAKNSYIKSEIHR--EIMTDT---- 265
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
++D+L ++PS+ +E RS M+ RA+ + +G+ L + P + K
Sbjct: 266 IEDSLKRLMMPSLERELRSEMTQRAEEKAISVFGENLSALLMQSPLKNK----------- 314
Query: 459 PRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFM 517
+ W P + ++D +G+V+D T QN ++ +K+ + K +
Sbjct: 315 ---VVLGWDPAYRTGCKIAVVDETGKVLDT--TTVYPTAPQNKVEETNKE-----ITKLI 364
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
++ +++ +G S S E+ D+ + + + E+ +Y
Sbjct: 365 DKYKVNIISIGNGTASRES-------------EQIVADIVKQKENVYYTIVSEAGASVYS 411
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLT 633
S++ ++L +++ AV++ R +Q+P++ + + G G+ L L+
Sbjct: 412 ASKLGEEELKDMNVSLRGAVSIARRIQDPMSELVKIDPKSIGVGQYQHDVNQKRLSEVLS 471
Query: 634 PDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAI 693
V+ D N+VG+D+N A ++ L +++G+ P A ++ + AG
Sbjct: 472 ---------NVVEDNVNKVGIDLNTA-----SYSILGYVAGITPSIAKNIVKYRDNAGKF 517
Query: 694 FTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
+++ + LG+ F GFLRV+ ++LD+T IHPE+Y +L
Sbjct: 518 KNKEELLKVTRLGQSCFEQCAGFLRVKEGD---------NILDNTGIHPEAYDKTYKLL- 567
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRREL 813
E+ + DI+ ED +E + R + L D K E TL I +EL
Sbjct: 568 EILDVDIQS-----EDFIE---DFTRKIDKTSQKDLSD------KLEIGMPTLIDIIKEL 613
Query: 814 IHGFQDWRNQYK-EPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAG 872
D R++ P + + + L+EG +++ TVR V A + G
Sbjct: 614 KKPGLDIRDEKNISPVLRSDVLKL-----EDLSEGMILKGTVRNVLEFGAFVDIGVKNDG 668
Query: 873 MLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
++ SD + + + + + GDI+ K+ I +R +V L R
Sbjct: 669 LVHISQLSDKFIKNPM-EVVSIGDIVNVKVIGIDLDRKKVSLTMR 712
>gi|221481073|gb|EEE19481.1| suppressor of ty, putative [Toxoplasma gondii GT1]
Length = 3132
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 175/417 (41%), Gaps = 77/417 (18%)
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
+Q+ D ERL++F DH V+G + L + E + +++ + + E+
Sbjct: 2098 EQRRAYQDLERLVRFFRDHFVDAAVVGVRDRFALLLYLILKERVVPKLKKKEQPLFLELA 2157
Query: 562 EL---SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGR 618
L +I G + P++ +++ + L ++L R LQ+PLA +A L GR
Sbjct: 2158 SLEVPTIWAGSDKAPQVLRQ-KLAKEGL--------MCLSLARTLQDPLAELAGLWSEGR 2208
Query: 619 E--ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW-------QFAPL 669
E +L KL PL+ + D +E+V++ +VG+++ A+ A L
Sbjct: 2209 ENSLLQLKLHPLQKLVPSDRLQSALERVLLTSVGKVGVELKRALRGSTAALGGNPTAALL 2268
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRK---------------------DFVTAH----- 703
QF+ GLGPRKAA L + + + R DF H
Sbjct: 2269 QFVPGLGPRKAARLL-GMFKTSTLLMRSQLCTPNDGSTSDSDGGRGDLDDFYPPHSQSEK 2327
Query: 704 ------GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP-ESYGLAQELAKEVY 756
GLG+KV++N V FLR++ S + +D LDDTRIHP E ++ ++
Sbjct: 2328 RHAQPVGLGRKVYLNCVSFLRLK---NKTSDPESVDALDDTRIHPLEGRSFVAKICRDAV 2384
Query: 757 NRDIEG------DLNDD---------EDALEMAIEHVRDRPDLLKTYLLD--RHIKEKKR 799
E + N D + E AI V +P LL L+ + + +
Sbjct: 2385 AEKDEAHQTEEEEENGDTGGARRRDEDVDDEDAIVEVFRKPALLDDMDLEAFSQMLAETK 2444
Query: 800 ENKRETLYL--IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV 854
+ R YL I EL H ++D R ++ S+ E F+ GE D G V V
Sbjct: 2445 DQARCLPYLEFITSELRHPYRDPRLPFESASEMEVFFWAIGEDADEFHPGSSVSCQV 2501
>gi|291535706|emb|CBL08818.1| Transcriptional accessory protein [Roseburia intestinalis M50/1]
Length = 752
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 121/551 (21%), Positives = 237/551 (43%), Gaps = 96/551 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL +A G + Q+ L SLE+ ++ DP++
Sbjct: 142 KPKRRTRATIAKEKGLEPLA---GIITLQM-LNTSLEEEAEKFVDPEKE----------- 186
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSAIDSFHQFA 327
S++ + GA+ + A IS E R +R + + ++S P+ +S + +++F
Sbjct: 187 -VMSAEDAIAGAKDIIAESISDEADYRSRIRDLTVKKGRMISAAKDPEAESVYEMYYEF- 244
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
++P+ K + L + + E EK L V I+ P + + + K+ + D +
Sbjct: 245 ------DEPVAKLAGHRILALNRGENEKFLTVKIEAPVEDILRYLE--KKVIVRDNPQTT 296
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
L +++DA D + P++ +E RS ++ +A+ + +GK L + P
Sbjct: 297 PVLKE-----VIEDAYDRLIAPAIEREIRSDLTEKAEDGAIKVFGKNLEQLLMQPPI--- 348
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQ 504
A VL W P + ++D +G+V+D V++ Q
Sbjct: 349 ---------AGQVVLG--WDPAFRTGCKLAVVDPTGKVLDTTVIYPTA----------PQ 387
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
+K + + +LK ++ H+ ++ N + + + ++I ++++E P V +
Sbjct: 388 NKVEEAKAVLKKLISKY-HITLISLGNGTASRESE---QVIVELLKEIPVKVQY------ 437
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREI 620
+ +E+ +Y S++++++ P + A ++ R LQ+PLA + + G G+
Sbjct: 438 -IIVNEAGASVYSASKLATEEFPQFDVGQRSAASMARRLQDPLAELVKIDPKSIGVGQYQ 496
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
L L G++E D N+VG+D+N A + L++ISG+ A
Sbjct: 497 HDMNQKKLSEALG-----GVVE----DCVNRVGVDLNTA-----SASLLEYISGISKAVA 542
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ + G R + LG K + GFLR+ LD T +
Sbjct: 543 KNIVAYREKNGRFEARNQLLKVAKLGPKAYEQCAGFLRINDGKNP---------LDATGV 593
Query: 741 HPESYGLAQEL 751
HPESY A+ L
Sbjct: 594 HPESYAAAKTL 604
>gi|158321498|ref|YP_001514005.1| RNA-binding S1 domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158141697|gb|ABW20009.1| RNA binding S1 domain protein [Alkaliphilus oremlandii OhILAs]
Length = 718
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 237/509 (46%), Gaps = 72/509 (14%)
Query: 257 TPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV-STCPT 313
T EE+A F + N+ + + GA+ + A +S + R+ +R + + N ++ S
Sbjct: 137 TMEELAMPFLNEELEVNTVEDAVSGAKDIIAEIVSDDAAYRENIRKLNLTNGIIKSEAVD 196
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+ + + ++ F+ + + K + + L + + E EK L+V + P++
Sbjct: 197 SEEKTVYEMYYDFS-------EGVHKIANHRILALNRGENEKKLKVKLVSPDE------- 242
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ E+ + + +A + + ++D+ + PS+ +E RSL++ RA+ + +GK
Sbjct: 243 EILEYLIKSVIKNNAAITKIVLQEAVEDSYKRLIGPSIEREIRSLLTERAEDEAIKVFGK 302
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
+ + P KD V+ P + +LD +G+++D +T
Sbjct: 303 NTKPLLLIAPV--KD------------VMVLAIDPSYRTGCKIAILDQTGKLLD--YT-T 345
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ + + + ++SKK +E + K+ +D P + S + ++ ++ ++++E
Sbjct: 346 IYPNAPHHKTEESKKVIKELIEKYNIDIIP-------IGNGTASRETEL--LVAEIIKEI 396
Query: 553 P-RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
P R+V + +IV E+ +Y S++++++ P +++ A+++GR LQ+PLA +
Sbjct: 397 PNREVYY-----TIV--SEAGASVYSASKLATEEYPDIDVSIRGAISIGRRLQDPLAELV 449
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+ P S + ++ L + ++ V+ D N VG+D+N+A + LQ+
Sbjct: 450 KI-DPK----SIGVGQYQHDLNQTKLGETLKNVVEDCVNSVGVDLNIATP-----SLLQY 499
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+SG+ P A ++ + G RK+ LG K F GFLR+
Sbjct: 500 VSGITPSIAKNIVKYREENGKFKNRKELAKVKRLGDKAFEQCAGFLRISDGDHP------ 553
Query: 732 IDLLDDTRIHPESYGLAQELAKEV-YNRD 759
LD+T +HPESY + +L K++ Y+ D
Sbjct: 554 ---LDNTAVHPESYEITLKLIKKLGYSED 579
>gi|237829725|ref|XP_002364160.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211961824|gb|EEA97019.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|221507019|gb|EEE32623.1| suppressor of ty, putative [Toxoplasma gondii VEG]
Length = 3132
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 175/417 (41%), Gaps = 77/417 (18%)
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
+Q+ D ERL++F DH V+G + L + E + +++ + + E+
Sbjct: 2098 EQRRAYQDLERLVRFFRDHFVDAAVVGVRDRFALLLYLILKERVVPKLKKKEQPLFLELA 2157
Query: 562 EL---SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGR 618
L +I G + P++ +++ + L ++L R LQ+PLA +A L GR
Sbjct: 2158 SLEVPTIWAGSDKAPQVLRQ-KLAKEGL--------MCLSLARTLQDPLAELAGLWSEGR 2208
Query: 619 E--ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW-------QFAPL 669
E +L KL PL+ + D +E+V++ +VG+++ A+ A L
Sbjct: 2209 ENSLLQLKLHPLQKLVPSDRLQSALERVLLTSVGKVGVELKRALRGSTAALGGNPTAALL 2268
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRK---------------------DFVTAH----- 703
QF+ GLGPRKAA L + + + R DF H
Sbjct: 2269 QFVPGLGPRKAARLL-GMFKTSTLLMRSQLCTPNDGSTSDSDGGRGDLDDFYPPHSQSEK 2327
Query: 704 ------GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP-ESYGLAQELAKEVY 756
GLG+KV++N V FLR++ S + +D LDDTRIHP E ++ ++
Sbjct: 2328 RHAQPVGLGRKVYLNCVSFLRLK---NKTSDPESVDALDDTRIHPLEGRSFVAKICRDAV 2384
Query: 757 NRDIEG------DLNDD---------EDALEMAIEHVRDRPDLLKTYLLD--RHIKEKKR 799
E + N D + E AI V +P LL L+ + + +
Sbjct: 2385 AEKDEAHQTEEEEENGDTGGARRRDEDVDDEDAIVEVFRKPALLDDMDLEAFSQMLAETK 2444
Query: 800 ENKRETLYL--IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV 854
+ R YL I EL H ++D R ++ S+ E F+ GE D G V V
Sbjct: 2445 DQARCLPYLEFITSELRHPYRDPRLPFESASEMEVFFWAIGEDADEFHPGSSVSCQV 2501
>gi|404492518|ref|YP_006716624.1| S1 RNA-binding domain-containing transcriptional accessory protein
[Pelobacter carbinolicus DSM 2380]
gi|77544600|gb|ABA88162.1| S1 RNA-binding domain-containing transcriptional accessory protein
[Pelobacter carbinolicus DSM 2380]
Length = 759
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 178/783 (22%), Positives = 319/783 (40%), Gaps = 142/783 (18%)
Query: 149 EEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYK 208
E E R++ + +L ++ +EA + E++D L+ P YK
Sbjct: 70 ELEERKVTVLASIEEQGKLVPELAARIEATRQKNELED------LYLP----------YK 113
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK-ETPEEMASNFKC 267
PKR T+ + GL +A G +LE+ D + E P+
Sbjct: 114 -PKRRTRAMIARERGLEPLADLIAAQQLTSG---TLEQAAAAFVDAQGEVPD-------- 161
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFA 327
+ A LQGA + A +S + +R VR + + V S+ PD + F +
Sbjct: 162 -----AAAALQGATDILAERLSEDADMRAVVRRLTWEQGVFSSQVAPDFAGKVSKFEMY- 215
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ ++PLR+ + L +++ E+E +L+++I PE+ L + ++ L G S
Sbjct: 216 ---YDYQEPLREVPSHRMLAMRRGEKEDVLRLSIVAPEEELLQRLAN----RLLLGESIF 268
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
L D + DA + PS+ E R RA ++ ++G +
Sbjct: 269 RPLLED----VAIDAYRRLIAPSIEVELRLEAKKRA-------------DEAAIGVFADN 311
Query: 448 DNDITPDEEAAPR-VLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS 505
++ A R VL PG + + +D +G ++ T +SQ
Sbjct: 312 LRNLLLLPPAGSRRVLGV--DPGLRTGSKLAAVDGTGRYLEDATIYPHTGKSQI------ 363
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
+ + +LL+ + H +V +G + D++ V E RD G + L +
Sbjct: 364 -EPARAQLLRLIQTHGIEMVAIGN---GTAGREMDLF------VRETLRDAGVQ---LPV 410
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
V +E+ +Y S I+ ++ P V+ A+++ R LQ+PLA + + + ++
Sbjct: 411 VMVNEAGASVYSASDIAREEFPDLDLTVRGAISIARRLQDPLAELVKIDPKSIGVGQYQ- 469
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
+ P K + + V N VG+D+N A W A L ++SG+G ASL +
Sbjct: 470 ---HDVNQPALKKALDDTVE-SCVNFVGVDLNTA---SW--ALLSYVSGIG----ASLAK 516
Query: 686 SLVR----AGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIH 741
++VR G +RK + G K + A GFLR+R S LD+T +H
Sbjct: 517 AMVRYRESQGVFGSRKGLLNTPRFGAKTYEQAAGFLRIRGSENP---------LDNTAVH 567
Query: 742 PESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKREN 801
PE+Y + +A + + +++ + PD + L+R++ E
Sbjct: 568 PENYPTVETMASD----------------MGLSVAELVAAPDKVAGVQLERYVTETV--- 608
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQR 861
TL I EL +D R Q++ S ++ IS L EG ++ TV V
Sbjct: 609 GLPTLRDIVEELKKPGRDPRRQFETVSFRDDVREIS-----DLKEGMILSGTVTNVAAFG 663
Query: 862 A---ICVLESGLAGML-MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
A I V + GL + + + D + + GDI+ K+ S+ R ++ L +
Sbjct: 664 AFVDIGVHQDGLVHVSHLAHRFVKDP-----GEVVRVGDIVKVKVLSVDAARKRIGLSIK 718
Query: 918 ESE 920
E++
Sbjct: 719 EAQ 721
>gi|357056774|ref|ZP_09117803.1| hypothetical protein HMPREF9467_04775 [Clostridium clostridioforme
2_1_49FAA]
gi|355379613|gb|EHG26769.1| hypothetical protein HMPREF9467_04775 [Clostridium clostridioforme
2_1_49FAA]
Length = 715
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 126/552 (22%), Positives = 233/552 (42%), Gaps = 98/552 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ GL E L +S++ G E E+ A+ F
Sbjct: 105 KPKRRTRAMIARDKGL-----------EPLADLISMQMTG-------EPVEKAAAGFVSE 146
Query: 269 M--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN-AVVSTCPTPDGDSAIDSFHQ 325
+ Q +QGAR + A IS R Y+R+I M+ A+ S+ S + ++
Sbjct: 147 EKGVATVQEAIQGARDILAERISDNAAFRTYIRNITMNKGAIQSSAKDEKAQSVYEMYYN 206
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVS 385
+ E+P++K + L + + E EK+L V + PE+ + K+ + D
Sbjct: 207 Y-------EEPVKKAAGHRILALNRGENEKMLTVKVLAPEEQILGYLE--KQTIVRD--- 254
Query: 386 KSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
N ILK+A + + PS+ +E R+ ++ RA+ + +GK L +
Sbjct: 255 ------NPYTTPILKEAAADSYGRLIGPSIEREIRNDLTERAEEGAIKVFGKNLEQLLMQ 308
Query: 442 GPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNV 500
P + + W P + ++DS+G+V+D +
Sbjct: 309 PPIVGR--------------VVLGWDPAFRTGCKLAVVDSTGKVLDTVVIYPTA------ 348
Query: 501 RDQQSKKNDQERLLK-FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHE 559
Q+K + +++LK F+ + ++ +G S S +II +++E V +
Sbjct: 349 --PQNKVEESKKILKAFIKKYNISLISVGNGTASRES-----EQIIVDLLKEIREQVQY- 400
Query: 560 MDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGRE 619
V +E+ +Y SR+++++ P + AV++ R LQ+PL+ + + +
Sbjct: 401 ------VIVNEAGASVYSASRLATEEFPAFDVGQRSAVSIARRLQDPLSELVKI-----D 449
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRK 679
S + ++ + +E V+ D N+VG+D+N A + L+++SG+
Sbjct: 450 PKSIGVGQYQHDMNQKRLGEALEGVVEDCVNKVGVDLNTA-----SASLLEYVSGINKTL 504
Query: 680 AASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
A ++ GA +RK + LG K F GF+R+ G+ + LD T
Sbjct: 505 AKNIVAYREENGAFKSRKQLLKVAKLGPKAFEQCAGFMRI-TGGE--------NPLDGTS 555
Query: 740 IHPESYGLAQEL 751
+HPESY A +L
Sbjct: 556 VHPESYDAAGKL 567
>gi|346227091|ref|ZP_08848233.1| RNA-binding protein [Anaerophaga thermohalophila DSM 12881]
gi|346227141|ref|ZP_08848283.1| RNA-binding protein [Anaerophaga thermohalophila DSM 12881]
Length = 706
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 159/705 (22%), Positives = 278/705 (39%), Gaps = 157/705 (22%)
Query: 58 ISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWH 117
IS I L+LL + IPFI+ YRKE SL +EV
Sbjct: 14 ISAPQIQNTLELLD-EGATIPFISRYRKERTGSL------DEV----------------- 49
Query: 118 KVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEA 177
+ AI + K+ L+KRK+ + K EE+ AL +L + I ++
Sbjct: 50 -AIAAIKESYHKFKELEKRKATIL----KTIEEQD---------ALTSELKERIENCYDS 95
Query: 178 AETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQ 237
E E +++ P YK PKR T+ S + GL +A +E+
Sbjct: 96 TELE----------DIYLP----------YK-PKRKTRASKAKELGLEPLAKIIMKQAEK 134
Query: 238 LGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKY 297
E A+ F + +A +QGAR + A I+ R+
Sbjct: 135 -------------------DVENRATQFLSDEVPNVEAAIQGARDIVAEWINENKTAREI 175
Query: 298 VRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLL 357
VR+ F +++++ + + + W +PL+K ++L +Q+ E+E +L
Sbjct: 176 VRNTFYHKSLITSKLIKGKEEEGAKYRDY--FDW--SEPLKKCPSHRFLAMQRGEKEGIL 231
Query: 358 QVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARS 417
+++ + P++ + EH G + +++ Q + ++DA L PS+ E +
Sbjct: 232 KISAQPPQEEIIPRL----EHLFIKGDTAASK----QVAMAIEDAYKRLLAPSLENETLA 283
Query: 418 LMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFV 476
+A + + + L + P +K RVLA PG + V
Sbjct: 284 TFKDKADEEAIKVFTENLRQLLLAPPLGQK------------RVLAI--DPGYRTGCKVV 329
Query: 477 MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF--MMDHQPHVVVLGAVNLSC 534
LD+ GE+ L ++ + +K + + K M+D A N+
Sbjct: 330 CLDAQGEL----------LHNETIYPHPPQKETGKSMKKLSSMVD---------AYNIEA 370
Query: 535 TSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
++ + + E R + D L + E +Y S+ + ++ P V+
Sbjct: 371 IAIGNGTAS---RETEAFVRKIKFNRD-LQVFVVSEDGASVYSASKAAREEFPDFDVTVR 426
Query: 595 RAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTN 650
AV++GR L +PLA + + G G+ L+ L ++ + V N
Sbjct: 427 GAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQTKLKEAL---------DRTVESVVN 477
Query: 651 QVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVF 710
VG+++N A H L +ISGLGP A S+ G +R LG K +
Sbjct: 478 MVGVNLNTASHH-----LLTYISGLGPALAKSIVAFRNEHGPFESRSQLKKVPRLGAKAY 532
Query: 711 VNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
A GFLR+ + LD+T +HPESY + +++AK++
Sbjct: 533 EQAAGFLRISNAKNP---------LDNTAVHPESYSIVEKMAKDL 568
>gi|334127701|ref|ZP_08501604.1| YhgF like protein [Centipeda periodontii DSM 2778]
gi|333388837|gb|EGK60007.1| YhgF like protein [Centipeda periodontii DSM 2778]
Length = 754
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 197/861 (22%), Positives = 339/861 (39%), Gaps = 178/861 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ R ++ R
Sbjct: 59 VPFIARYRKEATGSL-------------EDEMLRQ---------------------VETR 84
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L+S K R EE RI ++ +L D + ++EAAE + ++D L+ P
Sbjct: 85 LTYLRSLVK-RQEEILARIEEQGKLT------DDLRAAIEAAEKLQTLED------LYRP 131
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR T+ S + GL +A+K E G
Sbjct: 132 ----------YKQKKR-TRASVARERGLEGLANKMLLQKETEG----------------- 163
Query: 257 TPEEMASNFKCAMFNSSQAV--LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
TPEE A + A + S L GAR + A I E +R+ +R F NAV+ T
Sbjct: 164 TPEEHAVPYVDAKKDVSTVADALAGARDILAETIMDEAELRRRMRDKFWKNAVLETTLDA 223
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP-EDSLNKLFS 373
+ A F + G +P+R + L I + E++ L V I + ED++ ++
Sbjct: 224 AAEDA-QVFQMYDGYS----EPVRTLPSHRILAINRGEKKGCLNVRIVVDHEDNIEWIYK 278
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + ++ + ++D L+P++ +E R+ ++ A+ + +G
Sbjct: 279 R---------IYQRPSIFEGELHAAIEDGYKRLLVPALERELRTQLTEAAEEKAISVFG- 328
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
+ A VL PG + ++D++G +VL +G
Sbjct: 329 -----------HNLRQLLLQPPLAGHTVLG--LDPGYRTGCKTAVVDATG---NVLASGV 372
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ Q + +++ + LLK + H ++ +G S YE + V
Sbjct: 373 I----QVTKSDGERRSAAQTLLKLIEAHGVTLISIGNGTAS--------YET-EQFVAAL 419
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RD + + ++ + +E+ +Y S+++ ++LP ++ AV++ R +Q+PLA +
Sbjct: 420 IRD--NNLKDVHYLITNEAGASVYSASQLAKEELPDYDVTIRGAVSIARRVQDPLAELVK 477
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ ++ ++ + ++ + D N VG+D+N A A
Sbjct: 478 IDPQAIGVGQ---------YQHDVSQKDLKETLDATVEDAVNHVGVDLNTA-----SPAL 523
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L I+G+ A ++ + G +RK + LG F GFLR+ G+ A
Sbjct: 524 LNRIAGINSAIAKNIVAYRNKNGRFTSRKALLKVARLGDAAFTQCAGFLRI-YEGETA-- 580
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL---- 784
LD T IHPESY LA+ + E+ G + DD +RDR L
Sbjct: 581 ------LDATAIHPESYELARSILAEL------GAVEDD----------LRDRTKLPALA 618
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
LKT + + KK + T+ I + + +D R P + +S L
Sbjct: 619 LKTAQTEAALLAKKLDAGVPTVTDILKAIARPGRDPREDLPAPLMRQNVVKLSD-----L 673
Query: 845 AEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
A G ++ TVR + A + AG+L + S R D L GD L I S
Sbjct: 674 AVGTILPGTVRNITDFGAFIDIGLKQAGLLHISEMS-HRRVRHPLDVLSVGDALDVMIIS 732
Query: 905 IQKNRYQVFLVCRESEMRNNR 925
I + R ++ L + E R
Sbjct: 733 IDEERGRIGLSLKRIEKEKAR 753
>gi|255654236|ref|ZP_05399645.1| putative RNA-binding protein [Clostridium difficile QCD-23m63]
Length = 713
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 159/776 (20%), Positives = 335/776 (43%), Gaps = 153/776 (19%)
Query: 157 DETRLALNQ-QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTK 215
D RL Q +L D I++++E A+T +EV+D+ + P YK+ KR T+
Sbjct: 69 DVVRLIDEQGKLTDEITQNIEKAKTLQEVEDI-------YAP---------YKQKKR-TR 111
Query: 216 YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQA 275
+ + GL +A L+ +L+ + E E+ + +E+ S +
Sbjct: 112 ATIAKEKGLENLALSI--------LENNLDNIEIEAENYLDEEKEVLS---------IED 154
Query: 276 VLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREK 335
L+GAR + A +S + +RKY+R + + ++ + D S D ++ ++ +
Sbjct: 155 ALKGARDIIAELVSDDAKIRKYIRELALREGMIVSKSATDEKSVYDMYYDYS-------E 207
Query: 336 PLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQR 395
++ + L I + E+E L+V +++ D K+ + Y++D + + ++
Sbjct: 208 AVKSMAPHRVLAINRGEKENFLKVKLEINND---KVLNYIINEYVND------KNFKNKE 258
Query: 396 ELI--LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
E++ ++D+ + PS+ +E R+ ++ A+ + +GK + + + P + K
Sbjct: 259 EIVNSIEDSYKRLIFPSIEREIRNHLTEIAQERAISVFGKNVKSLLLQPPVKDK------ 312
Query: 454 DEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER 512
+ + P + ++D +G+++D +T QN D + K +
Sbjct: 313 --------VVMGFDPAFRTGCKIAVVDKNGKLLD--YTTVYPTDPQN--DVEGAK----K 356
Query: 513 LLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
+LK +++ + ++ +G S S + +M++E R+V + V E+
Sbjct: 357 VLKGLIEKYDIDIISIGNGTASRES-----ETFVSEMIKEIDREVQY-------VIVSEA 404
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCP 627
+Y S +++++ P +++ A+++ R LQ+PLA + + G G+
Sbjct: 405 GASVYSASELANEEHPDINVSIRGAISIARRLQDPLAELVKIDPKSIGVGQYQHDLNKKR 464
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
LE L G++E D N VG+D+N A ++ L+ I+G+ A ++
Sbjct: 465 LEEVLD-----GVVE----DSVNSVGVDLNTA-----SYSLLEHIAGISKAIAKNIIAYR 510
Query: 688 VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
G +R LG + F GF+R+ LD+T +HPESY +
Sbjct: 511 EENGDFTSRAQLKKVKRLGPQAFTQCAGFMRILEGKNP---------LDNTGVHPESYDI 561
Query: 748 AQELAK-------EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD--RHIKEKK 798
+++ + +V N++I+ DE E+ ++ + ++ ++ + L D IK+
Sbjct: 562 CKKMIEIIGYSLDDVKNKNID---EIDEKIKEIGLKELSEKLEVGQVTLKDIIAEIKKPG 618
Query: 799 RENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
R+ + E + I R + +D + EG +++ T+R V
Sbjct: 619 RDPREEGIKPILRTDVLKIED------------------------IQEGMILKGTIRNVV 654
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
A + G++ K + S+ + +S + GDI+ K+ I N+ +V L
Sbjct: 655 DFGAFVDIGIKNDGLVHKSEMSNSFVKDPMS-IVTVGDIVDVKVIGIDLNKKRVAL 709
>gi|225872519|ref|YP_002753974.1| S1 RNA binding domain-containing protein [Acidobacterium capsulatum
ATCC 51196]
gi|225793377|gb|ACO33467.1| S1 RNA binding domain protein [Acidobacterium capsulatum ATCC
51196]
Length = 753
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 183/873 (20%), Positives = 350/873 (40%), Gaps = 180/873 (20%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+L++S + + LL + +PFIA YRKE N D+ +
Sbjct: 16 AQELAVSTHSLAAVIALLD-EGGTVPFIARYRKE--------------ATGNLDEVQ--- 57
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
I +++K SY++ E ESRR +A +L + +
Sbjct: 58 ----------IRAIEEKL-----------SYFR---ELESRRETVLASIAEQGKLTEELK 93
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
+ +EA E++D+ L + +PKR TK + + GL E +K+
Sbjct: 94 EKIEAVLNRSELEDLYLPY-----------------KPKRRTKATIAREKGL-EPLAKYL 135
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
++ E G Q +L +M P EE+ S + L+GARH+ A IS
Sbjct: 136 WNQET-GPQ-TLSEM-----TPAFVNEELG-------VASVEEALEGARHIVAEWISESA 181
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAE 352
+RK +R + ++ +V + D + F + + ++P + + L I++ E
Sbjct: 182 DLRKALRRVMLEEGIVVSRKALDAKDEQEKFKMY----YEYQEPAKTIPSHRMLAIRRGE 237
Query: 353 EEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
E +L I E ++ + + H V + W Q +L ++DA L S+
Sbjct: 238 SEGVLYFLI---EVEAARVMALTRAH-----VMRQPGDWTAQLDLAIEDAWQRLLNSSIQ 289
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KP 471
E R + R+ + + + L++ + P A P + PG +
Sbjct: 290 AEIRFELKQRSDAEAIQVFRDNLYHLLLAPP-------------AGP-ISVLGIDPGLRT 335
Query: 472 ETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA 529
++D +G+++ DV++ + Q+++ + HQ + +G
Sbjct: 336 GCKMAVVDETGKLLAHDVIYPHT---------SKHGIAEAQQKVEALIRQHQVRAIAIGN 386
Query: 530 VNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQ 589
S + D + V E R+ ++ E+ V E+ +Y S ++ + P
Sbjct: 387 ---GTASRETDAF------VREFMRE--KKIQEIFSVTVSEAGASVYSASDVARQEFPDL 435
Query: 590 KGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
V+ A+++ R LQ+PL+ + + G G+ ++ + + + +E V+
Sbjct: 436 DLTVRGAISIARRLQDPLSELVKVDPKSIGVGQ---------YQHDVDQRQLHESLENVI 486
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGL 705
N+VG+D+N + W L++++G+ R A ++ G +R + G+
Sbjct: 487 ESCVNRVGVDLNTS---SWTL--LRYVAGVTERTAVNIVNYRNENGRFRSRTQLLEVSGV 541
Query: 706 GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLN 765
G K F A GFLR+ R G+ + LD T +HPESYG+ +++A+
Sbjct: 542 GPKTFEQAAGFLRI-RDGE--------NPLDMTAVHPESYGVVEQIAQ------------ 580
Query: 766 DDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYK 825
+L + + P++++T L + + T+ I EL +D R+++
Sbjct: 581 ----SLSVTV------PEIIRTPQLLERVDRSQLSAGAFTVNDILDELRKPGRDPRDRFA 630
Query: 826 EPSQDEEFYMISGETEDT-LAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWR 884
PS + G E T L EG V++ V V A + G++ + S+ +
Sbjct: 631 APS------FLEGVKEITDLKEGMVLEGVVTNVTKFGAFVDVGVHQDGLVHISELSNRF- 683
Query: 885 DSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
E S+ + G I+ K+ S ++ L R
Sbjct: 684 IKEPSEAVKAGQIVRVKVLSADAKTKRIALSMR 716
>gi|296452521|ref|ZP_06894218.1| YhgF like protein [Clostridium difficile NAP08]
gi|296881067|ref|ZP_06905010.1| YhgF like protein [Clostridium difficile NAP07]
gi|296258626|gb|EFH05524.1| YhgF like protein [Clostridium difficile NAP08]
gi|296427933|gb|EFH13837.1| YhgF like protein [Clostridium difficile NAP07]
Length = 723
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 159/776 (20%), Positives = 335/776 (43%), Gaps = 153/776 (19%)
Query: 157 DETRLALNQ-QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTK 215
D RL Q +L D I++++E A+T +EV+D+ + P YK+ KR T+
Sbjct: 79 DVVRLIDEQGKLTDEITQNIEKAKTLQEVEDI-------YAP---------YKQKKR-TR 121
Query: 216 YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQA 275
+ + GL +A L+ +L+ + E E+ + +E+ S +
Sbjct: 122 ATIAKEKGLENLALSI--------LENNLDNIEIEAENYLDEEKEVLS---------IED 164
Query: 276 VLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREK 335
L+GAR + A +S + +RKY+R + + ++ + D S D ++ ++ +
Sbjct: 165 ALKGARDIIAELVSDDAKIRKYIRELALREGMIVSKSATDEKSVYDMYYDYS-------E 217
Query: 336 PLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQR 395
++ + L I + E+E L+V +++ D K+ + Y++D + + ++
Sbjct: 218 AVKSMAPHRVLAINRGEKENFLKVKLEINND---KVLNYIINEYVND------KNFKNKE 268
Query: 396 ELI--LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
E++ ++D+ + PS+ +E R+ ++ A+ + +GK + + + P + K
Sbjct: 269 EIVNSIEDSYKRLIFPSIEREIRNHLTEIAQERAISVFGKNVKSLLLQPPVKDK------ 322
Query: 454 DEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER 512
+ + P + ++D +G+++D +T QN D + K +
Sbjct: 323 --------VVMGFDPAFRTGCKIAVVDKNGKLLD--YTTVYPTDPQN--DVEGAK----K 366
Query: 513 LLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
+LK +++ + ++ +G S S + +M++E R+V + V E+
Sbjct: 367 VLKGLIEKYDIDIISIGNGTASRES-----ETFVSEMIKEIDREVQY-------VIVSEA 414
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCP 627
+Y S +++++ P +++ A+++ R LQ+PLA + + G G+
Sbjct: 415 GASVYSASELANEEHPDINVSIRGAISIARRLQDPLAELVKIDPKSIGVGQYQHDLNKKR 474
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
LE L G++E D N VG+D+N A ++ L+ I+G+ A ++
Sbjct: 475 LEEVLD-----GVVE----DSVNSVGVDLNTA-----SYSLLEHIAGISKAIAKNIIAYR 520
Query: 688 VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
G +R LG + F GF+R+ LD+T +HPESY +
Sbjct: 521 EENGDFTSRAQLKKVKRLGPQAFTQCAGFMRILEGKNP---------LDNTGVHPESYDI 571
Query: 748 AQELAK-------EVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD--RHIKEKK 798
+++ + +V N++I+ DE E+ ++ + ++ ++ + L D IK+
Sbjct: 572 CKKMIEIIGYSLDDVKNKNID---EIDEKIKEIGLKELSEKLEVGQVTLKDIIAEIKKPG 628
Query: 799 RENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
R+ + E + I R + +D + EG +++ T+R V
Sbjct: 629 RDPREEGIKPILRTDVLKIED------------------------IQEGMILKGTIRNVV 664
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
A + G++ K + S+ + +S + GDI+ K+ I N+ +V L
Sbjct: 665 DFGAFVDIGIKNDGLVHKSEMSNSFVKDPMS-IVTVGDIVDVKVIGIDLNKKRVAL 719
>gi|315917617|ref|ZP_07913857.1| transcription accessory protein [Fusobacterium gonidiaformans ATCC
25563]
gi|317059143|ref|ZP_07923628.1| transcription accessory protein [Fusobacterium sp. 3_1_5R]
gi|313684819|gb|EFS21654.1| transcription accessory protein [Fusobacterium sp. 3_1_5R]
gi|313691492|gb|EFS28327.1| transcription accessory protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 723
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 132/628 (21%), Positives = 263/628 (41%), Gaps = 131/628 (20%)
Query: 145 KKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDE 204
+KR EE R I ++ +L + ++K+++ AE +EV+D+ +FP
Sbjct: 65 EKRKEEVLRLIEEQGKLT------EELTKAIQVAEKLQEVEDI------YFPY------- 105
Query: 205 GQYKRPKRSTKYSSCSKAGLWEVASKF--GYSSEQLGLQLSLEKMGDELEDPKETPEEMA 262
R K+ TK + GL +A F +S +++ E A
Sbjct: 106 ----RKKKKTKADVAIEKGLEPLADFFLLAHSVQEI--------------------ETKA 141
Query: 263 SNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF-----MDNAVVSTCPTPDGD 317
F + + ++GA+ + A ++S + R+ +R I MD+ D
Sbjct: 142 QEFITEEVPNIEEAIEGAKLIWAQKVSEKAEYRERIREILLKYGKMDSKESKKAKELDEK 201
Query: 318 SAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKE 377
+ +++++ + L K + L + + E+E +L V + L E + E
Sbjct: 202 AVYQDYYEYS-------ESLAKIPSHRILAVNRGEKEGILSVNLSLEEKEKQHV-----E 249
Query: 378 HYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWN 437
L +K +L+ + I++DA D L P++ +E R++++ +A+ ++ + + L N
Sbjct: 250 SLLLRSFTKEVELY-ELFHSIIRDAYDRLLFPAVEREVRNILTDKAEEEAILVFRENLKN 308
Query: 438 KVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSG--EVVDVLFTGCLT 494
+ P K PG + +LD G + DV F
Sbjct: 309 LLLQAPLHEKT--------------ILALDPGYRTGCKVAILDKHGFYQENDVFFL---- 350
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
+ + ++ ++ +++ LK++ + +VV+G S + + K++ E
Sbjct: 351 --VEGMHHEKQLEDARKKALKYIKKYGIDLVVIGNGTAS-----RETESFVAKLIREEKL 403
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
+ + + +E+ +Y S++++++ P V+ A+++GR +Q+PLA + +
Sbjct: 404 KIQY-------LIANEAGASVYSASKLAAEEFPDLDVTVRGAISIGRRIQDPLAELVKID 456
Query: 614 ---CGPG---REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G ++ +L DE ++QV+ V N VG ++N A W A
Sbjct: 457 PKSIGVGMYQHDVNQGRL---------DES---LDQVITTVVNNVGANLNTA---SW--A 499
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L ISG+ A ++ G R+ + GLG K + GFL +
Sbjct: 500 LLSHISGIKKTVAKNIVEYRKENGNFTKRESLLKVKGLGPKAYEQMAGFLVIPEGD---- 555
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV 755
++LD+T IHPESY +A+++ KE+
Sbjct: 556 -----NILDNTIIHPESYHIAEKMLKEI 578
>gi|423306062|ref|ZP_17284061.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides uniformis CL03T00C23]
gi|423309393|ref|ZP_17287383.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides uniformis CL03T12C37]
gi|392679619|gb|EIY72999.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides uniformis CL03T00C23]
gi|392685072|gb|EIY78391.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides uniformis CL03T12C37]
Length = 711
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 129/552 (23%), Positives = 223/552 (40%), Gaps = 94/552 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L L++ DP PEE A+N+
Sbjct: 107 KPKRKTRAEAARQKGL-----------EPLATLLMLQR------DPH--PEERAANYVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ + L+GAR + A +S + R VR+ F +++ + + +
Sbjct: 148 DVKNVEDALKGARDIIAEHVSEDERARNSVRNAFARQGILTAKVVKGKEEEATKYRDYFD 207
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ L++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 208 CS----ESLKRCNSHRLLAIRRAEAEGLLKVSIS-PDDE------ECVER-LERQFVRSN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
Q ++D+ L PS+ E + RA + + + L + P +K
Sbjct: 256 NPCGQQVAEAVQDSYKRLLKPSIETEFATQSKERADEEAIKVFAENLRQLLLASPLGQK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + V LD+ G + L ++N+
Sbjct: 315 -----------RVMG--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVS 351
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E K M + + + AV + + + E F + RD+ I
Sbjct: 352 KQKEAFAKLQMMIESYKI--DAVAIGNGTASRETEE--FLKHQRFNRDI-------QIFI 400
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSW 623
E +Y S+I+ D+ P V+ AV++GR L +PLA + + G G+
Sbjct: 401 VSEQGASIYSASKIARDEFPDYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDV 460
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
L+ L +Q + + N VG+++N A L +ISGLGP+ A ++
Sbjct: 461 DQTKLKKSL---------DQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQLAQNI 506
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
GA +RK+ + +G K F GFLR+ Q + LD+T +HPE
Sbjct: 507 VNYRTENGAFTSRKELMKVPRMGAKAFEQCAGFLRI---------PQAKNPLDNTAVHPE 557
Query: 744 SYGLAQELAKEV 755
SY + +++AK++
Sbjct: 558 SYCIVEQMAKDL 569
>gi|429735261|ref|ZP_19269230.1| Tex-like protein [Selenomonas sp. oral taxon 138 str. F0429]
gi|429159373|gb|EKY01888.1| Tex-like protein [Selenomonas sp. oral taxon 138 str. F0429]
Length = 729
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 200/860 (23%), Positives = 334/860 (38%), Gaps = 176/860 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL D+ R ++ R
Sbjct: 34 IPFIARYRKEATGSL-------------EDEMLRQ---------------------VEAR 59
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L+S K R EE RI ++ +L D + ++EAAE + ++D L+ P
Sbjct: 60 LTYLRSLVK-RQEEILARIEEQGKLT------DELRAAIEAAEKLQILED------LYRP 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR T+ S + GL +A+ E G
Sbjct: 107 ----------YKQKKR-TRASVARERGLEGLANTMLLQKETSG----------------- 138
Query: 257 TPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
TPE+ A+ + A S+ L GAR + A I E +R+ +R F NAV+ T
Sbjct: 139 TPEDAAAPYVDAEKDVPSAADALAGARDILAETIMDEAELRRLMREKFWKNAVLETTLDA 198
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
D + A F + G +P+R + L + + E++ L V I + ++
Sbjct: 199 DAEEA-QVFQMYDGYS----EPVRTLPSHRILAVNRGEKKGCLSVRIAVDHEA------- 246
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
++ + ++ + ++D L+P++ +E R+ ++ A+ + +G
Sbjct: 247 -NVDWIYKRLYARPSIFEGELRAAVEDGYKRLLVPALERELRTQLTEAAEEKAISIFG-- 303
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
+ A VL PG + ++D++G +VL +G +
Sbjct: 304 ----------HNLRQLLLQPPLAGHTVLG--LDPGYRTGCKVALVDATG---NVLASGVI 348
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
Q + +K+ LLK + H HV ++ N + + YE + V
Sbjct: 349 ----QVTKSDGERKSAATSLLKLIKAH--HVTLISIGNGTAS------YET-EQFVAALI 395
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
RD +++ ++ + +E+ +Y S+++ D+LP ++ AV++ R +Q+PLA + +
Sbjct: 396 RD--NDLKDVHYLITNEAGASVYSASQLAKDELPDYDVTIRGAVSIARRVQDPLAELVKI 453
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ ++ ++ + ++ + D N VG+D+N A A L
Sbjct: 454 DPQAIGVGQ---------YQHDVSQKQLRETLDATVEDAVNHVGVDLNTA-----SPALL 499
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
I+G+ A ++ G +RK LG F GFLR+ G+
Sbjct: 500 NRIAGINAAIAKNIVAYRNEHGRFASRKALHKVARLGDAAFTQCAGFLRI-YDGETP--- 555
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL----L 785
LD T IHPESY LA R I +L DED L RDR L L
Sbjct: 556 -----LDSTAIHPESYELA---------RSILVELGADEDDL-------RDRAKLPALAL 594
Query: 786 KTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
KT + KK T+ I + + +D R P + +S LA
Sbjct: 595 KTAQMSAAPLAKKLGAGVPTVTDILKAIARPGRDPREDLPAPLTRQNIVKLSD-----LA 649
Query: 846 EGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSI 905
G V++ TVR + A + AG+L + S R D L GD L I SI
Sbjct: 650 VGTVLKGTVRNITDFGAFIDIGLKQAGLLHISEMS-HRRVRHPLDVLSVGDSLDVMIISI 708
Query: 906 QKNRYQVFLVCRESEMRNNR 925
+ R ++ L + E R
Sbjct: 709 DEARGRIGLSLKRMEKEKAR 728
>gi|124003430|ref|ZP_01688279.1| S1 RNA binding domain protein [Microscilla marina ATCC 23134]
gi|123990999|gb|EAY30451.1| S1 RNA binding domain protein [Microscilla marina ATCC 23134]
Length = 764
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 170/714 (23%), Positives = 281/714 (39%), Gaps = 158/714 (22%)
Query: 50 PKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE 109
PK +L+I+ + LL + IPFIA YRKE SL NEV
Sbjct: 7 PKIAQELNITEHQVAATALLLD-EGATIPFIARYRKEATGSL------NEV--------- 50
Query: 110 RTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFD 169
V+ I D + L KR+ A+ K EE+ + L
Sbjct: 51 ---------VIAQIRDRLTQLRDLDKRREAIL----KSIEEQGK-------------LTP 84
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
+ K +EAAET ++D L+ P YK PK+ T+ + + GL +
Sbjct: 85 ELKKKIEAAETMTALED------LYLP----------YK-PKKRTRATIAREKGLEPLGE 127
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEIS 289
K ++ E L +K D PE+ N+ + L GAR + A +++
Sbjct: 128 KI-FAQEDFDLIAEAKKFID--------PEKG--------VNTEEEALAGARDIIAEKVN 170
Query: 290 CEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ R +R +F + P + + + W E+ +++ + L I+
Sbjct: 171 EDVEARATMRDLFWKKGAYTVKVIPGKEEEAKKYMDY--FDW--EEAVQEAPSHRVLAIR 226
Query: 350 KAEEEKLLQV-TIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
+ E+E +L + T E++L KL ++ +G S +Q EL +KDA L
Sbjct: 227 RGEKEGMLSLDTSPEEEEALQKL----AHRFVKEG---SNAENTEQMELAVKDAYKRLLK 279
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
SM E R +A S + + L + P +K VLA P
Sbjct: 280 SSMETEVRLKAKKKADSEAIQVFADNLRELLLAAPLGQK------------AVLAI--DP 325
Query: 469 G-KPETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
G + V LD G+++ DV+F + KK D + +
Sbjct: 326 GFRTGCKVVCLDPQGKLLKHDVIFPDRRRTEAMATIHDLCKKYDVQ------------AI 373
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+G S + E R +G E+ +V +ES +Y S ++ ++
Sbjct: 374 AIGNGTAS-------------RETEAFIRSIGLS-KEVLVVMVNESGASIYSASEVAREE 419
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMI 641
P + V+ +V++GR L +PLA + L G G+ L+ L
Sbjct: 420 FPDEDITVRGSVSIGRRLMDPLAELVKLDPKSIGVGQYQHDVDQTALKKSL--------- 470
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVT 701
+ V+ N+VG+++N A + L ++SGLGP A ++ GA +R +
Sbjct: 471 DDVVESSVNKVGVEVNTASKQ-----LLTYVSGLGPVLAQNIIEYRNENGAFKSRAELKK 525
Query: 702 AHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LG K F A GFLR+ G A + LD + +HPESY + +++AK++
Sbjct: 526 VKRLGNKAFEQAAGFLRI---GDAPNP------LDASAVHPESYPIVEQMAKDL 570
>gi|160889663|ref|ZP_02070666.1| hypothetical protein BACUNI_02090 [Bacteroides uniformis ATCC 8492]
gi|156860655|gb|EDO54086.1| Tex-like protein N-terminal domain protein [Bacteroides uniformis
ATCC 8492]
Length = 704
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 129/552 (23%), Positives = 223/552 (40%), Gaps = 94/552 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L L++ DP PEE A+N+
Sbjct: 100 KPKRKTRAEAARQKGL-----------EPLATLLMLQR------DPH--PEERAANYVKG 140
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ + L+GAR + A +S + R VR+ F +++ + + +
Sbjct: 141 DVKNVEDALKGARDIIAEHVSEDERARNSVRNAFARQGILTAKVVKGKEEEATKYRDYFD 200
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ L++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 201 CS----ESLKRCNSHRLLAIRRAEAEGLLKVSIS-PDDE------ECVER-LERQFVRSN 248
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
Q ++D+ L PS+ E + RA + + + L + P +K
Sbjct: 249 NPCGQQVAEAVQDSYKRLLKPSIETEFATQSKERADEEAIKVFAENLRQLLLASPLGQK- 307
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + V LD+ G + L ++N+
Sbjct: 308 -----------RVMG--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVS 344
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E K M + + + AV + + + E F + RD+ I
Sbjct: 345 KQKEAFAKLQMMIESYKI--DAVAIGNGTASRETEE--FLKHQRFNRDI-------QIFI 393
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSW 623
E +Y S+I+ D+ P V+ AV++GR L +PLA + + G G+
Sbjct: 394 VSEQGASIYSASKIARDEFPDYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDV 453
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
L+ L +Q + + N VG+++N A L +ISGLGP+ A ++
Sbjct: 454 DQTKLKKSL---------DQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQLAQNI 499
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
GA +RK+ + +G K F GFLR+ Q + LD+T +HPE
Sbjct: 500 VNYRAENGAFTSRKELMKVPRMGAKAFEQCAGFLRI---------PQAKNPLDNTAVHPE 550
Query: 744 SYGLAQELAKEV 755
SY + +++AK++
Sbjct: 551 SYCIVEQMAKDL 562
>gi|153941426|ref|YP_001389539.1| RNA-binding protein [Clostridium botulinum F str. Langeland]
gi|384460620|ref|YP_005673215.1| RNA-binding protein [Clostridium botulinum F str. 230613]
gi|152937322|gb|ABS42820.1| RNA-binding protein [Clostridium botulinum F str. Langeland]
gi|295317637|gb|ADF98014.1| RNA-binding protein [Clostridium botulinum F str. 230613]
Length = 718
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 168/727 (23%), Positives = 300/727 (41%), Gaps = 139/727 (19%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A ++ LE G+ ED K E + K
Sbjct: 106 RPKRRTRATIAEEKGLKPLA------------EIILE--GNFKEDIKVYASEFINEEK-- 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC-----PTPDGDSAIDSF 323
+ + LQGA + + IS E RK++R+ + V+ T PTP + +
Sbjct: 150 EVKTIEEALQGAMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTP-----YEMY 204
Query: 324 HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ + ++ ++ + L I + E+EK+L + ED K+ K L
Sbjct: 205 YDY-------KENVKNIPPHRILAINRGEKEKILTAKVTCNED---KIIDYLKSRSLKG- 253
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+K ++ ++ +KD+L + PS+ +E RS ++ + + + + + L + P
Sbjct: 254 -NKETDVYIEES---VKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K + + PG + +LD +G+++D T
Sbjct: 310 IKDK--------------VVLGYDPGFRTGCKIAVLDETGKLLD-------TATVYATAP 348
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
Q + + L K + + V+ LG S S E+I KM++E + G +
Sbjct: 349 QNDVEGSIKVLKKLIYKYDVDVISLGNGTASRES-----EEVISKMLKEIKEEKGKD--- 400
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ V E+ +Y S++++++ P +++ A+++GR LQ+PLA + + G G+
Sbjct: 401 IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQ 460
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L G++E D N VG+D+N A + L +ISG+
Sbjct: 461 YQHDVSQKKLDESLK-----GVVE----DCVNAVGVDLNTATP-----SLLSYISGINSS 506
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ G RK+ + LG+K F GFLRV S + LD+T
Sbjct: 507 IAKNIVAYREEIGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEP---------LDNT 557
Query: 739 RIHPESY-------GLAQELAKEVYN---RDIEGDLNDDEDALEMAIEHVRDRPDLLKTY 788
+HPESY L Q K+V N +DI+ +N+ + ++ + ++ D+ K
Sbjct: 558 GVHPESYEGTKKFLSLLQYDMKDVKNNKLQDIDARVNN------IGLDDICNKIDIGKLT 611
Query: 789 LLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT-LAEG 847
LLD IKE K+ + D R +P + +G + T L
Sbjct: 612 LLD-IIKEIKKPGR----------------DPREDLPKP------ILKTGIVDITQLKPD 648
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
V+ TVR V A + G++ SD + L D + GDI+ +I + K
Sbjct: 649 MVLMGTVRNVADFGAFVDIGVHQDGLVHISQLSDSFVKHPL-DIVKVGDIVEVRILEVDK 707
Query: 908 NRYQVFL 914
R ++ L
Sbjct: 708 KRNRISL 714
>gi|46446608|ref|YP_007973.1| hypothetical protein pc0974 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400249|emb|CAF23698.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 754
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 198/886 (22%), Positives = 355/886 (40%), Gaps = 188/886 (21%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+LS+S + +DLL IPFIA YRKE +L++ ++ N
Sbjct: 14 AQELSLSVHSVKAVVDLLEAGN-TIPFIARYRKEAT----SNLDEVQIKN---------- 58
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
+Q+R + L+ E E RR T + +L D++
Sbjct: 59 --------------------IQERHNYLK-------ELEERRQTILTSIESQGKLTDALR 91
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
+ + A + ++D+ L + +PKR T+ + GL +A
Sbjct: 92 EQILACNVKTILEDLYLPY-----------------KPKRRTRAMIAREKGLEPLAL--- 131
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC---AMFNSSQAVLQGARHMAAVEIS 289
L LS G+ P+E AS+F + + +QA+ GA + A I+
Sbjct: 132 -------LILSQPLQGN--------PQEAASSFINEGKGVLDVNQAI-SGALDIVAEMIA 175
Query: 290 CEPCVRKYVRSIFMDNAVVSTCPTPD--GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL 347
E VR YVR IF VV + G + + ++ F +EK ++ ++L
Sbjct: 176 EEAAVRSYVREIFATEGVVVSKVRSSVKGPTKFEQYYDF------KEK-VKTIPSHRYLA 228
Query: 348 IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
I++ E+E +L +I++ E S+ + K A ++ ++D+ L
Sbjct: 229 IRRGEKEDILDFSIEIEEFSVISQIAKLVN-------LKPASPFSSHLSQAVEDSFKRLL 281
Query: 408 LPSMVKEAR---SLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
PS+ + R L S RA + + L + + P K + I D P +
Sbjct: 282 YPSVETDVRLDLKLASDRAAVDI---FANNLRHLLLASPLGGK-SVIGID----PGIRTG 333
Query: 465 CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLR-SQNVRDQQSKKNDQERLLKFMMDHQPH 523
C V +D +G+ + +T+ SQ R Q + D L F+ ++P+
Sbjct: 334 CKC--------VAVDETGK-----YLNTITIYPSQGARAHQQAEKD---LATFIQFYKPY 377
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS---IVYGDESLPRLYENSR 580
V +G N + + + + K D L+ +V +ES +Y S
Sbjct: 378 AVAIG--NGTAGRETESFVKQLIKK------------DALTGTLVVTVNESGASVYSASD 423
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
++ ++ P ++ A+++ R LQ+PLA + + + ++ + L D+ +
Sbjct: 424 VAREEFPDLDLTIRGAISIARRLQDPLAELVKIDPKSIGVGQYQ-HDVHQSLLQDQLVHV 482
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
+E + N VG+D+N A APL ++SG+G A + + GA +R+
Sbjct: 483 VESCV----NHVGVDLNTA------SAPLLSYVSGIGQSLAQKMVKYRESHGAFKSRQQL 532
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD 759
G G K F A GFLR+ R+G+ LD + +HPE Y L +++AK
Sbjct: 533 KKVPGFGAKTFEQAAGFLRI-RNGEYP--------LDSSAVHPERYELVEQIAK------ 577
Query: 760 IEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQD 819
DLN +++ + D P+ + L +++ E TL I +EL +D
Sbjct: 578 ---DLN-------LSLRDLIDHPEFVAQIDLKKYMSASVGE---LTLKDILQELKKPGRD 624
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
R ++ PS E+ I L G ++ V V A + G++ +
Sbjct: 625 PRATFEPPSFREDILSIQD-----LKPGLHLEGIVTNVTAFGAFIDIGVHQDGLIHLSEL 679
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNR 925
SD + S +D + GD L ++ +I R ++ L R + R+ +
Sbjct: 680 SDHYV-SHPNDVVKAGDKLKVEVLTIDVERKRISLTARVGQNRSTK 724
>gi|403387500|ref|ZP_10929557.1| hypothetical protein CJC12_06614 [Clostridium sp. JC122]
Length = 720
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 172/780 (22%), Positives = 311/780 (39%), Gaps = 140/780 (17%)
Query: 154 RIYDETRLALNQ-QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKR 212
R D RL Q +L + I SLE A T E++D+ + P YK PK+
Sbjct: 67 RKTDVIRLIDEQGKLTEEIKTSLEKATTLTEIEDI-------YRP---------YK-PKK 109
Query: 213 STKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNS 272
T+ + + GL +A S + E AS F N
Sbjct: 110 RTRATIAVEKGLTPLAEVLFDGSFNSDIN------------------EYASQF----LNE 147
Query: 273 SQAV------LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQF 326
+ V QGA + + +IS E RKY+R++ + T + + ++ +
Sbjct: 148 EKGVKSIDEAFQGAMDIISEKISDEAEYRKYIRTLVFKEGYIETKGESKEPTPYEMYYDY 207
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSK 386
++ ++K + L I + E+EK+L V I D + YL + K
Sbjct: 208 -------KEEVKKIPSHRILAINRGEKEKILSVKITCDVDKII--------AYLKNKTLK 252
Query: 387 SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR 446
+ E ++D+L + PS+ +E R ++ + + + + L + + P +
Sbjct: 253 GNSRTDSYIEKSVEDSLKRLIYPSIEREIRGDLTDKGEVGAIDIFKANLKALLMISPIKG 312
Query: 447 KDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS 505
K + PG + +LD +G+ ++ + V++ +
Sbjct: 313 KT--------------VMGFDPGFRTGCKIAILDETGKFLENTAVFATAGSKEKVKESIN 358
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
L + H V+ LG S S ++ + E+I + E +D+ +
Sbjct: 359 T------LKNLCIKHDVDVISLGNGTASRES-EEVLAEVIKAVKSEIGKDIYY------- 404
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
V E+ +Y S++++++ P V+ A+++GR LQ+PLA + + P S +
Sbjct: 405 VVVSEAGASVYSASKLATEEYPDLDVTVRGAISIGRRLQDPLAELVKI-DPK----SIGV 459
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
++ +TP + ++ V+ D N VG+D+N+A + L +ISG+ A ++
Sbjct: 460 GQYQHDVTPKKLDESLKGVVEDCVNNVGVDLNVATP-----SLLSYISGINGTIAKNIVL 514
Query: 686 SLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
G TRK+ + LG K F GFLRV S + LD+T +HPESY
Sbjct: 515 YREENGKFTTRKELLKVKRLGAKAFEQCAGFLRVMESNEP---------LDNTSVHPESY 565
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRET 805
++L D L + E ++ + +LL +D +K+ E
Sbjct: 566 NACKKLL----------------DILNYSKEDIK-KGNLLD---IDSKVKDLGEVKLAEE 605
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQD--EEF---YMISGETEDT-LAEGRVVQATVRRVQG 859
+ + + QD + K+P +D EE SG E + L G ++ TVR V
Sbjct: 606 IGV----GVPTLQDIIKEIKKPGRDPREELPKPIFKSGIVEMSDLKPGMLLMGTVRNVSD 661
Query: 860 QRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRES 919
A + G++ SD + L D + GDI+ I + + R ++ L ++S
Sbjct: 662 FGAFVDIGVHQDGLVHISQLSDKFVKHPL-DVVKVGDIVEVSILEVDEKRKRISLSMKKS 720
>gi|170756784|ref|YP_001779803.1| RNA-binding protein [Clostridium botulinum B1 str. Okra]
gi|429243948|ref|ZP_19207430.1| RNA-binding protein [Clostridium botulinum CFSAN001628]
gi|169121996|gb|ACA45832.1| RNA-binding protein [Clostridium botulinum B1 str. Okra]
gi|428758868|gb|EKX81259.1| RNA-binding protein [Clostridium botulinum CFSAN001628]
Length = 718
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 169/724 (23%), Positives = 305/724 (42%), Gaps = 133/724 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A ++ LE G+ ED K E + K
Sbjct: 106 RPKRRTRATIAEEKGLKPLA------------EIILE--GNFKEDIKVYASEFINEEK-- 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC-----PTPDGDSAIDSF 323
+ + LQGA + + IS E RK++R+ + V+ T PTP + +
Sbjct: 150 EVKTIEEALQGAMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTP-----YEMY 204
Query: 324 HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ + ++ ++ + L I + E+EK+L + ED K+ K L
Sbjct: 205 YDY-------KENVKNIPPHRILAINRGEKEKILTAKVTCNED---KIIDYLKSRSLKG- 253
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+K ++ ++ +KD+L + PS+ +E RS ++ + + + + + L + P
Sbjct: 254 -NKETDVYIEES---VKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K + + PG + +LD +G+++D T + +
Sbjct: 310 IKDK--------------VVLGYDPGFRTGCKIAVLDETGKLLD---TATVYATAPQNDV 352
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
+ S K +E + K+ +D V+ LG S S E+I KM++E + G +
Sbjct: 353 EGSIKVLKELIYKYDVD----VISLGNGTASRES-----EEVISKMLKEIKEEKGKD--- 400
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ V E+ +Y S++++++ P +++ A+++GR LQ+PLA + + G G+
Sbjct: 401 IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQ 460
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L G++E D N VG+D+N A + L +ISG+
Sbjct: 461 YQHDVSQKKLDESLK-----GVVE----DCVNAVGVDLNTATP-----SLLSYISGINSS 506
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ G RK+ + LG+K F GFLRV S + LD+T
Sbjct: 507 IAKNIVAYREEIGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEP---------LDNT 557
Query: 739 RIHPESY-------GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
+HPESY L Q K+V N ++ D++D + + ++ + ++ D+ K LLD
Sbjct: 558 GVHPESYEGTKKFLSLLQYDIKDVKNNKLQ-DIDDRVN--NIGLDDICNKIDIGKPTLLD 614
Query: 792 RHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT-LAEGRVV 850
IKE K+ + D R +P + +G + T L V+
Sbjct: 615 -IIKEIKKPGR----------------DPREDLPKP------ILKTGIVDITQLKPDMVL 651
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY 910
TVR V A + G++ SD + L D + GDI+ +I + K R
Sbjct: 652 MGTVRNVADFGAFVDIGVHQDGLVHISQLSDSFVKHPL-DIVKVGDIVEVRILEVDKKRN 710
Query: 911 QVFL 914
++ L
Sbjct: 711 RISL 714
>gi|336171937|ref|YP_004579075.1| competence protein ComEA [Lacinutrix sp. 5H-3-7-4]
gi|334726509|gb|AEH00647.1| competence protein ComEA helix-hairpin-helix repeat protein
[Lacinutrix sp. 5H-3-7-4]
Length = 706
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 204/487 (41%), Gaps = 69/487 (14%)
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTPDGDSAIDSFHQFAGV 329
++ L+GARH+ A I+ +R +R+ A++ST D F +
Sbjct: 148 TADQALEGARHIIAEWINERTDIRNNLRNQLQRYAMISTKVVKAKKEDDNAQKFRDY--F 205
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ 389
W E+ L + + L I +AE+E ++V I + D + L + + KS
Sbjct: 206 DW--EEALNRIPSHRLLAILRAEKEGFIRVKIDI--DKIKAL------ENIDRKLIKSNN 255
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN 449
DQ EL + DA L PS+ EA +A + + + K L + P K
Sbjct: 256 ACADQIELAISDAYKRLLFPSLSNEALQNAKEKADASAISVFAKNLKQLLLGSPLGEK-- 313
Query: 450 DITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVLA PG + V LD+ G + L ++ + K +
Sbjct: 314 ----------RVLAI--DPGFRTGCKLVCLDAQGTL----------LHNETIYPHPPKSD 351
Query: 509 DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG 568
+ K + + + A+ S + E + K V H +++ +
Sbjct: 352 TTGSIKKIASLTEAYKIEAIAIGNGTASRET---EALVKKV--------HFKNDVQVFVV 400
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPL 628
E+ +Y S+I+ D+ P V+ +V++GR LQ+PLA + + S +
Sbjct: 401 SEAGASIYSASKIARDEFPNYDVTVRGSVSIGRRLQDPLAELVKIDAK-----SIGVGQY 455
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
++ + + ++ V+ + N VG++IN A + L ++SG+GP+ A ++
Sbjct: 456 QHDVDQAKLQKQLDLVVENCVNSVGVNINTA-----STSLLSYVSGIGPKLAENIFNYRN 510
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
+ GA TR D LG K F FLR+++ A LDD+ +HPESY +
Sbjct: 511 QNGAFKTRNDIKKVPRLGGKAFEQGAAFLRIKKGTNA---------LDDSAVHPESYKIV 561
Query: 749 QELAKEV 755
+++AKE+
Sbjct: 562 EKMAKEL 568
>gi|423285188|ref|ZP_17264071.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis HMW 615]
gi|404579250|gb|EKA83966.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis HMW 615]
Length = 707
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 224/561 (39%), Gaps = 112/561 (19%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQ-LGLQLSLEKMGDELEDPKETPEEMASNFKC 267
+PKR T+ + + GL +A E LG ++ GD
Sbjct: 106 KPKRKTRAEAARQKGLEPLALLLMMQRENNLGSRIPAFVKGD------------------ 147
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS--TCPTPDGDSA-IDSFH 324
++ L+GAR + A ++S + R VR++F AV+S DG++A +
Sbjct: 148 --VKDAEDALKGARDIIAEQVSEDERARNAVRNLFAHQAVISAKVVKGKDGEAAKYRDYF 205
Query: 325 QFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGV 384
F+ PL++ + L I++AE E LL+V+I P+D +C E L
Sbjct: 206 DFSS-------PLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDD------ECLER-LDRQF 250
Query: 385 SKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY 444
+S Q ++DA L PS+ E SL +A + + + L + P
Sbjct: 251 VRSNNECGRQVAEAVQDAYRRLLKPSIETEFASLSKEQADDEAIRVFAENLRQLLLAPPL 310
Query: 445 QRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ 503
+K RV+ PG + V LD+ G +V ++N+
Sbjct: 311 GQK------------RVMGI--DPGFRTGCKVVCLDAQGNLV----------HNENIYPH 346
Query: 504 ---QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
K +L K + ++ + +G S E V H+
Sbjct: 347 PPVDKKTEAASKLRKMIEAYKIEAIAIGNGTAS----------------RETENFVTHQQ 390
Query: 561 DE--LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ + + E +Y S+ + D+ P V+ AV++ R L +PLA + +
Sbjct: 391 FDRPVQVFVVSEQGASIYSASKTARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSI 450
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ L+ L +Q + + NQVG+++N A L +ISG
Sbjct: 451 GVGQYQHDVDQTKLKKSL---------DQTVENCVNQVGVNLNTASSH-----LLTYISG 496
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
LGP+ A ++ GA +RK+ + +G K F GFLR+ R
Sbjct: 497 LGPQLAQNIVAYRAANGAFASRKELMKVPRMGAKAFEQCAGFLRIARGENP--------- 547
Query: 735 LDDTRIHPESYGLAQELAKEV 755
LD+T +HPESYG+ Q++AK++
Sbjct: 548 LDNTAVHPESYGIVQQMAKDL 568
>gi|348027449|ref|YP_004767254.1| S1 RNA binding domain protein [Megasphaera elsdenii DSM 20460]
gi|341823503|emb|CCC74427.1| S1 RNA binding domain protein [Megasphaera elsdenii DSM 20460]
Length = 716
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 183/798 (22%), Positives = 322/798 (40%), Gaps = 146/798 (18%)
Query: 144 YKKRYEEESRRIYDETRLALNQQLFD----------SISKSL-----------EAAETER 182
+ RY +E+ DE +L Q+ +D ++ +S+ E E R
Sbjct: 31 FIARYRKEATGSLDEVQLRCIQEQYDYEQALASRKETVRQSIIDQGCWNNELAEELEAAR 90
Query: 183 EVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQL 242
++ DV+ +L+ P YK PK+ TK S +AGL +A F L
Sbjct: 91 QLQDVE---DLYLP----------YK-PKKRTKASMAREAGLEPLADLF----------L 126
Query: 243 SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF 302
S + G PE+ A + S + +QGA ++ A S R+ +R
Sbjct: 127 SQKANG-------PAPEKAAQAYLTDEVPSVEDAIQGAANILAERFSERADFRRILRRDL 179
Query: 303 MDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK 362
A + TC +S +A + + + + L I + E EK L+VT+K
Sbjct: 180 WHQARL-TCSLQVEESEAGPMLTYADFS----ERIARIPSYRILAINRGENEKKLKVTLK 234
Query: 363 LPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN----FLLPSMVKEARSL 418
P D EH D + + + E+IL DA + + P M +E R+
Sbjct: 235 EPAD----------EHI--DRLCRLVIQRHSPYEVILCDAAADSYKRLISPQMEREIRNE 282
Query: 419 MSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVM 477
++ +A+ + + + L + + P+ A +L PG + +
Sbjct: 283 LTAQAEKQAIDVFAENLRHVLLQPPF------------AGQTILG--LDPGFRTGCKAAI 328
Query: 478 LDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
+D++G V L G L + +QS K L M+ Q + V L ++ S
Sbjct: 329 IDATGRV---LAYGTYYLTKSAYQKEQSAKT-----LARMI--QKYGVTLISIGNGTASY 378
Query: 538 KDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAV 597
+ + + + ++ ++ + V +E+ +Y S ++ ++LP ++ AV
Sbjct: 379 ETE--QFVSSLIADYQLSCRY-------VIANEAGASVYSASDLAREELPDLDVTIRGAV 429
Query: 598 ALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDIN 657
++ R +Q+PLA + + ++ + L+ ++QV+ V N VG+D+N
Sbjct: 430 SIARRIQDPLAESVKIDPRAIGVGQYQHDVNQKALS-----AALDQVVTSVVNYVGVDLN 484
Query: 658 LAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFL 717
A A LQ ISGL AA++ G R+D + LG F GFL
Sbjct: 485 TA-----SAALLQHISGLTAATAANIVAYRDENGPFQNRQDLLNVPRLGPATFTQCAGFL 539
Query: 718 RVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEH 777
R++ I+ LD+T +HPESYGLA+++A Y E DL D + +
Sbjct: 540 RIKDG---------IEPLDNTSVHPESYGLAEKIASH-YGLSHE-DLKDPDK-----LAG 583
Query: 778 VRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMIS 837
+RD+ + L + + T+ I EL +D R+++ +P +
Sbjct: 584 LRDKIQMNAAPKLAAVL-----DAGEPTIKDILEELRKPGRDVRSEFPKPLTRRHVMSL- 637
Query: 838 GETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYS-DDWRDSELSDKLHEGD 896
D L G VV+ TV+ V A G++ + S +R +D +H GD
Sbjct: 638 ----DDLQIGTVVRGTVQNVVDFGAFVDFGLKTPGLVHRSQLSRHPFRHP--TDVVHAGD 691
Query: 897 ILTCKIKSIQKNRYQVFL 914
I+ +I S+ R ++ L
Sbjct: 692 IVEAEIISVDAARGRIGL 709
>gi|78776336|ref|YP_392651.1| competence protein ComEA helix-hairpin-helix domain-containing
protein [Sulfurimonas denitrificans DSM 1251]
gi|78496876|gb|ABB43416.1| Competence protein ComEA helix-hairpin-helix region [Sulfurimonas
denitrificans DSM 1251]
Length = 657
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 138/626 (22%), Positives = 264/626 (42%), Gaps = 125/626 (19%)
Query: 149 EEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYK 208
+EE +R+ E R L Q+L SKS+E A+T R ++D+ + P YK
Sbjct: 27 KEEIKRLISE-RATLTQEL----SKSIEDADTMRVLEDI-------YRP---------YK 65
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEM---ASNF 265
K++++ ++ K GL +A + LE K + +E A F
Sbjct: 66 E-KKNSRAATAIKNGLTPLA--------------------NILESAKLSADEFKTKAKEF 104
Query: 266 KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQ 325
+S +A + GA+ + A + P R+ +R++ + + V+ T D F
Sbjct: 105 VKGELSSVEAAIDGAKDILAERYADMPREREAIRNMMLRSGVLEIKRTKTFDEN-GLFKN 163
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVS 385
F G + + + ++L + + EK L I + + K+ ++ KE+ + S
Sbjct: 164 FDG----KSERVAYMPSHRYLAVMRGVNEKELSAKITI---DVQKIEANIKEYKIPRNAS 216
Query: 386 KSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ 445
S + + KD L LLPS+ +E S + RA + +GK L + P
Sbjct: 217 SSKEFLFEA----YKDGLKRLLLPSLEREVNSELKERADISAISVFGKNLNQLLMTPPVT 272
Query: 446 RKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQ 503
+ RV+ + ++D +G ++ V++ Q
Sbjct: 273 K-------------RVILGVDPAFRTGCKLAVVDENGNYLESSVIYP---------TEPQ 310
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDEL 563
+N ++++L F + V +G N + + + + + K E L
Sbjct: 311 NDYENSKKKVLAFKDKYNITGVAIG--NGTGSRETQEFFARLNK----------DEGANL 358
Query: 564 SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL------CGPG 617
+ E+ +Y S+++S + P ++ A+++ LQ+P+A + + G
Sbjct: 359 NYTVVSEAGASVYSASKVASLEYPNLDVTIRGAISIAHRLQDPMASLVKIDPKSLGIGQY 418
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ + KL LE LT V D+ N++G+DIN A + L +++G+G
Sbjct: 419 QHDVDQKL--LEKKLT---------DVTQDLVNRIGVDINSA-----SLSLLSYVAGVGT 462
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
+ A ++ GA T++ ++ GLGKK + AVGF+R++ S ++ D+
Sbjct: 463 KVAQNIITYREENGAFKTKEQLLSVKGLGKKAYEQAVGFIRIKNSK---------NIFDN 513
Query: 738 TRIHPESYGLAQELAK-EVYNRDIEG 762
+ IHPESY +A++L ++ N D++
Sbjct: 514 SGIHPESYEVAKKLTGLDLTNIDVQA 539
>gi|326203351|ref|ZP_08193216.1| Tex-like protein [Clostridium papyrosolvens DSM 2782]
gi|325986609|gb|EGD47440.1| Tex-like protein [Clostridium papyrosolvens DSM 2782]
Length = 718
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 187/853 (21%), Positives = 341/853 (39%), Gaps = 179/853 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE V + ND R L +R
Sbjct: 32 IPFIARYRKE-------------VTGELNDQVLRE---------------------LYER 57
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
L++ ++R E RR+ +E +L + ++KSL+ A T +E++D+ +
Sbjct: 58 LVYLRNLEERR--EGVRRLIEE-----QGKLTEELAKSLDKAVTLQEIEDI-------YR 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
P +V KR T+ S + GL +A+ YS QL P +
Sbjct: 104 PYKV----------KRKTRASVAREKGLEPLATII-YS------QL-----------PSK 135
Query: 257 TP-EEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
TP E+A+ + NS+ + GA + A EIS RK +R I + +V +
Sbjct: 136 TPVSEIATKYIDGEKGVNSADEAIAGALDIIAEEISDNAVFRKTLREIIFKDGLVVSSGK 195
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+ DS ++ F ++P+ K + L + + E+E L V I + ED
Sbjct: 196 KEEDSVYRMYYDF-------KEPVSKIARHRVLALNRGEKEDFLNVRIDVKEDL------ 242
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
C + + + K+ Q E ++D+ + PS+ ++ R+ ++ ++ + + +
Sbjct: 243 -CLNYLKAHTIKKTNQEMAGYVESAVEDSFKRLIFPSLERDIRNQLTELSEDQAIKVFSE 301
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCL 493
L N + P + RV+ + ++D +G+V++ T
Sbjct: 302 NLRNLLLQPPVK-------------DRVVLGLDPAYRTGCKLAVVDETGKVLET--TVIY 346
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
QN ++ KK Q + ++ ++ +G S + +I+ + ++++E
Sbjct: 347 PTPPQNKVEEAKKKVKQ-----LIEKYKVDIISIGN---GTASKESEIF--VAELLKEIE 396
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
R V + + E+ +Y S++ +++ P ++ AV++ R LQ+PLA + +
Sbjct: 397 RKVYY-------MVVSEAGASVYSASKLGAEEFPDFDVALRSAVSIARRLQDPLAELVKI 449
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP-LQFI 672
+ ++ + L DE G V+ D N VG+D+N A AP L ++
Sbjct: 450 DPKAIGVGQYQHDMNQKRL--DESLG---GVVEDCVNNVGVDLNTA------SAPLLSYV 498
Query: 673 SGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
SG+ A ++ G R + LG K F GFLR+ G
Sbjct: 499 SGISSAIAKNVVEYREENGKFKARNELKKVKKLGNKTFEQCAGFLRITDGG--------- 549
Query: 733 DLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDR 792
++LD+T +HPESY A+ L + + ++E V+D+ K LD
Sbjct: 550 NILDNTSVHPESYKAAKLLL----------------ENMGYSLEDVKDK----KLAGLDT 589
Query: 793 HIKEKKRENKRE-------TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
+ + E TL I EL+ +D R++ +P + ED L
Sbjct: 590 KVVQTGMSQVAEKLGIGIPTLKDIINELLKPGRDPRDELPKPMLHSDVL----NMED-LK 644
Query: 846 EGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSI 905
G ++ TVR V A + G++ +D + + + D + GDI+ K+ +
Sbjct: 645 AGMILTGTVRNVADFGAFVDIGVHQDGLVHISQLADKFVKNPM-DVVAVGDIVKVKVIEV 703
Query: 906 QKNRYQVFLVCRE 918
R ++ L RE
Sbjct: 704 DVERKRISLTMRE 716
>gi|293115412|ref|ZP_05791358.2| S1 RNA binding domain protein [Butyrivibrio crossotus DSM 2876]
gi|292810175|gb|EFF69380.1| S1 RNA binding domain protein [Butyrivibrio crossotus DSM 2876]
Length = 720
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 156/681 (22%), Positives = 276/681 (40%), Gaps = 162/681 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDD-----FERTPTLKWHKVLWAIHDLDKKWL 131
IPFI+ YRKE +L ND+ FER L+
Sbjct: 37 IPFISRYRKEATGAL-------------NDEQLRKLFERLNYLRN--------------- 68
Query: 132 LLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKF 191
L+ RKS + S EE+ + L + K +E+AET V+D
Sbjct: 69 -LEDRKSTVLS----SIEEQGK-------------LTAELKKQIESAETMVAVED----- 105
Query: 192 NLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDE- 250
L+ P YK+ KR T+ + + GL +AS + LQ++ + + DE
Sbjct: 106 -LYRP----------YKQKKR-TRATIAKERGLSGLAS-------IISLQMTKKTLEDEA 146
Query: 251 ---LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNA 306
++ K+ P+ + + GA + A EIS R +RS+ F +
Sbjct: 147 KSYIDAEKDVPD-------------TDTAISGALDIIAEEISDSADYRTRIRSLTFKEGN 193
Query: 307 VVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPED 366
+ S P+ +S + ++ F+ P+ K + L I + E+EK+L V ++ P D
Sbjct: 194 LTSMAKDPEAESVYEMYYNFSS-------PVSKLTGYRVLAINRGEKEKVLTVKLEAPVD 246
Query: 367 SLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSW 426
+ K+ + D + + L + + DA + PS+ +E R+ ++ A+
Sbjct: 247 KILAYLE--KQVIVRDNPNTTPYL-----KTAVADAYSRLIAPSIEREIRNELTENAEDN 299
Query: 427 LLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV 485
+ +GK L + P K W P + ++D +G+V+
Sbjct: 300 AITVFGKNLEQLLMQPPIVGKT--------------VLGWDPAFRTGCKLAVVDPTGKVL 345
Query: 486 DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
D + QN K D+ + + + + HV ++ N S + ++ II
Sbjct: 346 DTVV--IYPTAPQN-------KVDEAKTILKKLIKKYHVDLISCGN-GTASRESEV--II 393
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
+++ E P +V + V +E+ +Y S +++++ P + A ++ R LQ+
Sbjct: 394 SELIHEIPENVQY-------VIVNEAGASVYSASELATEEFPNFDVGQRSAASIARRLQD 446
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PLA + + + S + ++ + + ++ V+ D N+VG+D+N A
Sbjct: 447 PLAELVKI-----DPKSIGVGQYQHDMNQKKLGSALDGVVEDSVNRVGVDLNTA------ 495
Query: 666 FAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
APL + ISG+ A ++ G TRKD + LG K F GF+R+R G
Sbjct: 496 SAPLLEHISGINKSLAKNIVAYREANGKFVTRKDLLKVPKLGAKAFEQCSGFMRIRDGGN 555
Query: 725 AASSSQFIDLLDDTRIHPESY 745
LD T +HPESY
Sbjct: 556 P---------LDSTGVHPESY 567
>gi|153815704|ref|ZP_01968372.1| hypothetical protein RUMTOR_01941 [Ruminococcus torques ATCC 27756]
gi|145846945|gb|EDK23863.1| Tex-like protein N-terminal domain protein [Ruminococcus torques
ATCC 27756]
Length = 717
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 150/680 (22%), Positives = 280/680 (41%), Gaps = 146/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL ND+ R K H+ L + +L+ +K+
Sbjct: 31 IPFISRYRKEATGSL-------------NDEQLR----KLHERLLYLRNLE------EKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ + S EE+ + + + + + + AET V+D L+ P
Sbjct: 68 EQVISSI-----EEQGK-------------MTEELKEKILLAETLVTVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A+ L+ KE
Sbjct: 104 -----------YRPKRRTRATIAKEKGLEPLAAYMM------------------LQQAKE 134
Query: 257 TPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPT 313
EE A + + + + + GA+ + A IS R ++R M VVST
Sbjct: 135 PLEETAKQYISEEKEVKTEEEAIAGAKDIIAEIISDNADYRTWIRKTTMKKGKVVSTAKD 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
P+ +S + +++F E+ + K + L + + E+EK+L V ++ PE+ + +
Sbjct: 195 PETESVYEMYYEF-------EESVEKLAGHRILALNRGEKEKILTVKVEAPEEDILRYLE 247
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
K+ ++D ++ L +++D+ + P++ +E R+ ++ +A+ + +GK
Sbjct: 248 --KKTIVNDNPYTTSVLKE-----VVEDSYKRLIEPAIEREIRNELTEKAEDGAIDVFGK 300
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L + P K + W P + ++D +G+V+ G
Sbjct: 301 NLHQLLMQPPIAGK--------------VVLGWDPAFRTGCKLAVVDPTGKVI-----GT 341
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ Q K ++ L K + + ++ LG S S + I ++++E
Sbjct: 342 TVIYPTAPTTPQKIKASKDLLKKIIPKYHISLISLGNGTASRES-----EQFIVELLKEI 396
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
P V + V +E+ +Y S+++S++ P + A ++ R LQ+PLA +
Sbjct: 397 PEQVRY-------VIVNEAGASVYSASKLASEEFPKFDVGQRSAASIARRLQDPLAELVK 449
Query: 613 LCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QF 671
+ + ++ + L EK G V+ D N+VG+D+N A APL +
Sbjct: 450 IDPKSIGVGQYQHDMNQKKL--GEKLG---GVVEDCVNKVGVDLNTA------SAPLLSY 498
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
ISG+ + ++ G +R++ + LG K F GF+R+ R G+
Sbjct: 499 ISGISSAISKNIVAYREEHGKFTSRRELLKVPKLGPKAFEQCAGFMRI-RDGE------- 550
Query: 732 IDLLDDTRIHPESYGLAQEL 751
+ LD T +HPESY A+ L
Sbjct: 551 -NPLDGTGVHPESYEAAKGL 569
>gi|268610305|ref|ZP_06144032.1| RNA binding S1 [Ruminococcus flavefaciens FD-1]
Length = 767
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 153/689 (22%), Positives = 274/689 (39%), Gaps = 158/689 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL DD +VL ++D + + L+
Sbjct: 31 IPFIARYRKELTGSL--------------DD----------QVLRELYD---RLMYLRN- 62
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+KR EE + I ++ +++ I ++ AA T EV+D+ F
Sbjct: 63 -------LEKRKEEVTNAITEQ------EKMTPEIEAAISAAVTLVEVEDIYRPF----- 104
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+PKR T+ S + GL +A L L+ D
Sbjct: 105 ------------KPKRRTRASIARENGLEPLAE----------LILAQNNSTD------- 135
Query: 257 TPEEMASNFKCAMFN--SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPT 313
PE+ A F N Q +QGA + A +IS + +RK +R++ + +VS
Sbjct: 136 -PEKEAEAFINEEKNVPDVQTAIQGAMDIIAEDISDDADIRKKLRTLAGEKGEMVSKASD 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
P+ +S ++++++ +P+ K + + L + + E+E L++ + L E + +
Sbjct: 195 PEAESVYSNYYEYS-------EPIPKMANHRVLAMDRGEKEGFLKIAVTLDEVAATDII- 246
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNF---LLPSMVKEARSLMSGRAKSWLLME 430
K + N EL+ A D++ + PS+ +E RS MS A +
Sbjct: 247 ----------FGKYVKANNACGELVRNAAADSYKRLIFPSIEREIRSEMSANAAEESIKV 296
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE-TTFVMLDSSGEVVDVLF 489
+ L + P + + PG ++D +G+V+D
Sbjct: 297 FAANLRQMLLQPPLKSS--------------VILGLDPGYAHGCKTAVIDGTGKVLDT-- 340
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
+ + + ++++ +F+ + + + +G N + + + I K V
Sbjct: 341 --AIIYPVRESASAAKVEAAKKKVKEFIQKYGVNAIAIG--NGTASRETESFAAEIIKEV 396
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
+ E+S + E+ +Y S+I++++ P +++ A+++ R LQ+PLA
Sbjct: 397 PQ----------EVSYMVVSEAGASVYSASKIAAEEFPEYDVSIRGAISIARRLQDPLAE 446
Query: 610 VATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ + G G+ + L G++E D N VG+D+N A H
Sbjct: 447 LVKIDPKAIGVGQYQHDMPQARMSEALG-----GVVE----DCVNSVGVDLNTASH---- 493
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
+ L +ISG+ A ++ G RK+ + LGKK F GFLRVR
Sbjct: 494 -SLLSYISGINATVAKNIVAYREENGRFNDRKELMKVPKLGKKAFEQCAGFLRVRDGKNP 552
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKE 754
LD+T +HPESY A+ L E
Sbjct: 553 ---------LDNTAVHPESYKAAESLLSE 572
>gi|164687095|ref|ZP_02211123.1| hypothetical protein CLOBAR_00721 [Clostridium bartlettii DSM
16795]
gi|164603980|gb|EDQ97445.1| Tex-like protein N-terminal domain protein [Clostridium bartlettii
DSM 16795]
Length = 724
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 129/610 (21%), Positives = 266/610 (43%), Gaps = 117/610 (19%)
Query: 151 ESRRIYDETRLALNQ-QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKR 209
ESR+ D TR+ Q +L + + K++ A+T +EV+D+ + P YK+
Sbjct: 75 ESRK-EDVTRIIEEQGKLTEELKKNIAKAKTLQEVEDI-------YAP---------YKQ 117
Query: 210 PKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK-MGDELEDPKETPEEMASNFKCA 268
KR T+ + + GL +A+ LEK +GD A+N+ A
Sbjct: 118 KKR-TRATIAKEKGLEPLANAI------------LEKNIGD--------INAEANNYIDA 156
Query: 269 M--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQF 326
S++ ++GA + A +S + VRKY+R + +++ V+ T T D S D ++ +
Sbjct: 157 EKGVESAEDAIKGALDIIAEAVSDDAEVRKYIRKLAIEHGVIVTQNTSDEKSVYDMYYDY 216
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSK 386
+ + ++ + L I + E+E L+V +++ D K+ + ++ Y++
Sbjct: 217 S-------EAVKTMASHRVLAINRGEKENFLKVKLEIDND---KVLNYIEKRYINKN--- 263
Query: 387 SAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
N Q E + A+++ + PS+ +E R+ ++ A+ + +G+ + N +
Sbjct: 264 -----NSQNEAAIISAIEDSYKRLIFPSIEREIRAYLTENAQERAISVFGENIKNLLLQP 318
Query: 443 PYQRKDNDITPDEEAAPRVLACCWGPGKPE-TTFVMLDSSGEVVDVLFTGCLTLRSQNVR 501
P + K + + PG ++D +G+ +D + V+
Sbjct: 319 PLKGK--------------IVMGFDPGYVNGCKIAVVDRNGKFLD---QAIVYPHKPQVK 361
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
+ ++K ++L + + V+ +G S S K +I +++E + +
Sbjct: 362 MESARK----KVLDLVKKYDIDVIAIGNGTASRESEK-----MIADLIKEENLNTQY--- 409
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREIL 621
V E+ +Y S +++++ P +++ A+++GR LQ+PLA + + E
Sbjct: 410 ----VIVSEAGASIYSASELAAEEHPDINVSIRGAISIGRRLQDPLAELVKI-----EPQ 460
Query: 622 SWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAA 681
+ + ++ L +++ V+ D N VG+D+N A ++ L+ +SG+ A
Sbjct: 461 NIGVGQYQHDLNKKRLTEVLDGVVEDSVNSVGVDLNTA-----SYSLLEHVSGISKSVAK 515
Query: 682 SLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIH 741
++ GA +R LG FV GF+R+ LD+T +H
Sbjct: 516 NIVLYREENGAFTSRAQLKKVKRLGPSAFVQCAGFMRIADGKNP---------LDNTGVH 566
Query: 742 PESYGLAQEL 751
PESY + +++
Sbjct: 567 PESYDVCKKM 576
>gi|153956208|ref|YP_001396973.1| hypothetical protein CKL_3612 [Clostridium kluyveri DSM 555]
gi|219856533|ref|YP_002473655.1| hypothetical protein CKR_3190 [Clostridium kluyveri NBRC 12016]
gi|146349066|gb|EDK35602.1| Tex [Clostridium kluyveri DSM 555]
gi|219570257|dbj|BAH08241.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 717
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 211/489 (43%), Gaps = 72/489 (14%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
NS + L GA + + IS E RK++R DN + T + + ++ +
Sbjct: 151 VNSIEDALSGAMDIISEIISDEAKYRKWIRKFVQDNGSIETKGENKEPTPYEMYYDY--- 207
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ 389
+ ++ + L I + E+EK+L V I +NK+ + YL K +
Sbjct: 208 ----HEAIKSIPPHRILAINRGEKEKILSVKITC---DMNKI-----KEYLKGECLKGNK 255
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN 449
+ + E ++D+L + PS+ +E RS ++ + + + L + P + K+
Sbjct: 256 VTDSYIERSVEDSLKRLIYPSIEREIRSELTDMGEEGAIKIFKANLKALLMQPPIKGKN- 314
Query: 450 DITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
+ PG + +LD +G+++D + +N
Sbjct: 315 -------------VIGYDPGFRTGCKIAVLDDTGKLLDTATVYA-----------TAPQN 350
Query: 509 DQERLLKFMMD----HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
D E LK + + + V+ LG S S ++ I +I ++ +E +DV + M
Sbjct: 351 DVEGSLKILKNLVYRYDVSVISLGNGTASRES-EEVIGRLIKEVKKEKNKDVYYVM---- 405
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
E+ +Y S +++ + P +++ A+++GR LQ+PLA + + P S
Sbjct: 406 ---VSEAGASVYSASELAAKEYPDINVSLRGAISIGRRLQDPLAELVKI-DPK----SIG 457
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+ ++ ++P + +E ++ D N VG+D+N+A + L +ISG+ AA++
Sbjct: 458 VGQYQHDVSPKKLDESLEGIVEDCVNSVGVDLNMA-----TASLLSYISGINSSIAANIV 512
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
G RK+ + LG K F GFLRV S + LD+T +HPES
Sbjct: 513 AYREENGKFKNRKELLKVKRLGAKAFEQCAGFLRVMESNEP---------LDNTSVHPES 563
Query: 745 YGLAQELAK 753
Y A++L K
Sbjct: 564 YSDAKKLLK 572
>gi|168177509|ref|ZP_02612173.1| RNA-binding protein [Clostridium botulinum NCTC 2916]
gi|182670333|gb|EDT82307.1| RNA-binding protein [Clostridium botulinum NCTC 2916]
Length = 718
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 144/608 (23%), Positives = 260/608 (42%), Gaps = 109/608 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A ++ LE G+ ED K E + K
Sbjct: 106 RPKRRTRATIAEEKGLKPLA------------EIILE--GNFKEDIKVYASEFINEEK-- 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC-----PTPDGDSAIDSF 323
+ + LQGA + + IS E RK++R+ + V+ T PTP + +
Sbjct: 150 EVKTIEEALQGAMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTP-----YEMY 204
Query: 324 HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ + ++ ++ + L I + E+EK+L + ED K+ K L
Sbjct: 205 YDY-------KENVKNIPPHRILAINRGEKEKILTAKVTCNED---KIIDYLKSRSLKG- 253
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+K ++ ++ +KD+L + PS+ +E RS ++ + + + + + L + P
Sbjct: 254 -NKETDVYIEES---VKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K + + PG + +LD +G+++D T
Sbjct: 310 IKDK--------------VVLGYDPGFRTGCKIAVLDETGKLLD-------TATVYATAP 348
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
Q + + L K + + V+ LG S S EII KM++E + G +
Sbjct: 349 QNDVEGSIKVLKKLIYKYDVDVISLGNGTASRES-----EEIISKMLKEIKEEKGKD--- 400
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ V E+ +Y S++++++ P +++ A+++GR LQ+PLA + + G G+
Sbjct: 401 IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQ 460
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L G++E D N VG+D+N A + L +ISG+
Sbjct: 461 YQHDVSQKKLDESLK-----GVVE----DCVNAVGVDLNTATP-----SLLSYISGINSS 506
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ G RK+ + LG+K F GFLRV S + LD+T
Sbjct: 507 IAKNIVAYREEIGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEP---------LDNT 557
Query: 739 RIHPESY-------GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
+HPESY L Q K+V N ++ D++D + + ++ + ++ D+ K LLD
Sbjct: 558 GVHPESYEGTKKFLSLLQYDIKDVKNNKLQ-DIDDRVN--NIGLDDICNKIDIGKPTLLD 614
Query: 792 RHIKEKKR 799
IKE K+
Sbjct: 615 -IIKEIKK 621
>gi|288561435|ref|YP_003424921.1| RNA-binding S1 domain-containing protein [Methanobrevibacter
ruminantium M1]
gi|288544145|gb|ADC48029.1| RNA-binding S1 domain-containing protein [Methanobrevibacter
ruminantium M1]
Length = 728
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 147/728 (20%), Positives = 297/728 (40%), Gaps = 124/728 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E+A+ +++ LE++ ++ ++ EE
Sbjct: 105 KPKRRTRATIAKEKGLEELANIILAQE----IEVPLEEIAEDYITKDDSVEEELR----- 155
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPTPDGDSAIDSFHQFA 327
N+ + + GA+ + A IS R +R + + D ++S D DS D +++++
Sbjct: 156 -VNTVEEAIGGAQDIIAEIISDNASFRSLIRELSYEDGELISEAKDKDADSVYDMYYEYS 214
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYL-SDGVSK 386
+ + K + L I + E+EK L++ I PE+ + S H L + G
Sbjct: 215 -------EEVSKIASHRVLAINRGEKEKFLKIKISAPEEDI---ISYLTRHVLINKGGKP 264
Query: 387 SAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
+ ++N E LK+A+ + + P++ +E R+ + +A+ + + K L +
Sbjct: 265 TKPIYNKYTEETLKEAIQDSYKRLIAPAIERELRNQLFEKAEDKSIKLFSKNLEQLLMQA 324
Query: 443 PYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQN-V 500
P K + W P + ++D G+V+D T QN +
Sbjct: 325 PIINK--------------VVLGWDPAFRTGCKLAVVDEYGKVLDT--TVVYPTEPQNKI 368
Query: 501 RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
+ +S D + + +++ +G S S E D+ ++
Sbjct: 369 AETRSTVRD------LIFKYDINIIAIGNGTASRES-------------EAIVADIIKDL 409
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
D + V +E+ +Y S +++++ P + A+++ R LQ+PLA + + P
Sbjct: 410 D-VQYVIVNEAGASVYSASELATEEFPDYNVGERSAISIARRLQDPLAELVKI-DPK--- 464
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
S + ++ + + ++ V+ N VG+D+N A + ++ ++G+ A
Sbjct: 465 -SIGVGQYQHDMNQKKLGESLDNVVEKSVNNVGVDVNTA-----SVSLMEHVAGISKTVA 518
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ G +TR + + LG K F GF++V+ LD+T +
Sbjct: 519 KNIVSYREENGKFYTRDELLNVKKLGPKAFEQCAGFMKVKGPNP----------LDNTTV 568
Query: 741 HPESYGLAQEL-------AKEVYNRDI-EGDLNDDEDALEMAIEHVRDRPDLLKTYLLDR 792
HPESYG +++ N+ I E DL+ L D+
Sbjct: 569 HPESYGATIAFLSFLGYSIEDLENKKIKESDLD-----------------------LTDK 605
Query: 793 HIKEKKRENKRETLYL--IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
++ +E ++ L I +EL +D R++ +P ++ T + L +G V+
Sbjct: 606 QFEDMAQELGIGSITLKDIAKELKKPGRDPRDEMPQPILRKDVL-----TMEDLEKGMVL 660
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKI--KSIQKN 908
TVR + + GM+ K + +D + D + GDI+ K+ I K
Sbjct: 661 SGTVRNIVDFGIFVDIGVHQDGMVHKSEITDSQYVNHPMDFVSVGDIIDVKVLDVDIPKR 720
Query: 909 RYQVFLVC 916
R Q+ ++
Sbjct: 721 RIQLSMII 728
>gi|160892953|ref|ZP_02073742.1| hypothetical protein CLOL250_00485 [Clostridium sp. L2-50]
gi|156865512|gb|EDO58943.1| Tex-like protein N-terminal domain protein [Clostridium sp. L2-50]
Length = 716
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 197/851 (23%), Positives = 345/851 (40%), Gaps = 183/851 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ND+ RT LD++
Sbjct: 31 IPFIARYRKEATGSL-------------NDEQLRT--------------LDERL------ 57
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
Y + EE ++ + L D + +S+ AAET V+D L+ P
Sbjct: 58 ------TYLRGLEERKEKVI--ATIEEQGMLTDELKQSILAAETLVAVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK PKR T+ + GL +A+ + LQ++ + +
Sbjct: 104 ----------YK-PKRKTRATIAQSKGLTGLANI-------ISLQMTNKPI--------- 136
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV-VSTCPTPD 315
T E +A + +S + + GA + A IS R +R+ MD V ++T P+
Sbjct: 137 TEEALAYVSEEKEVHSPEEAIAGAMDIIAESISDNAEYRTEIRNRTMDKGVLITTAKDPE 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + ++ F+ P+RK + L I + E+EK L V I P D +
Sbjct: 197 AESVYEMYYDFS-------TPVRKMTGYRTLAINRGEKEKFLSVKIDAPVDEIIG----- 244
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDAL----DNFLLPSMVKEARSLMSGRAKSWLLMEY 431
+ + + V + ND ILKDA+ + + PS+ ++ RS ++ A+ + +
Sbjct: 245 --YLIREVVVRDNPNTND----ILKDAIADSYERLIAPSIERDIRSSLTEAAEDGAIKVF 298
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFT 490
G L + P + W P + ++D++G+ VL T
Sbjct: 299 GSNLKQLLMQPPINGH--------------VVLGWDPAFRTGCKLAVVDATGK---VLTT 341
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
+ + + ++SKK ++ + K+ N+S S+ + + E
Sbjct: 342 KVIYPTAPQNKVEESKKILKDLIKKY--------------NISLISVGNGTAS---RESE 384
Query: 551 EHPRDVGHEMD-ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
D+ HE+D ++ V +E+ +Y S++++++ P + A ++ R LQ+PLA
Sbjct: 385 AIIADLIHELDTKVQYVIVNEAGASVYSASKLATEEFPSFDVGQRSAASIARRLQDPLAE 444
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
+ + + ++ + LT ++ V+ D NQVG+D+N A APL
Sbjct: 445 LVKIDPKAIGVGQYQHDMNQKKLTE-----ALDAVVEDSVNQVGVDLNTA------SAPL 493
Query: 670 -QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
+ ISG+ A ++ G RK+ + LG K F GF+R+
Sbjct: 494 MEHISGITKTLAKNIIEYREANGRFTNRKELLKVAKLGPKAFEQCAGFMRI--------- 544
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
S + LD T +HPESY +A+ L + + Y+ D DL + L+ + D
Sbjct: 545 SGGTNPLDATSVHPESYEIAETLIRHLGYSMD---DLASGQ--LKGITKAAGD------- 592
Query: 788 YLLDRHIKEKKRENKRETLYL--IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
IK +E T+ + + +EL +D R++ +P + E +D L
Sbjct: 593 ------IKALAKELGVGTVTVTDLVKELEKPARDPRSEMPQPILRGDIL----EMKD-LK 641
Query: 846 EGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSI 905
EG +++ TVR V A + G++ SD + L D + GDI+T K+ +
Sbjct: 642 EGMILKGTVRNVIDFGAFVDIGVHQDGLVHISQMSDKFIKHPL-DVVSVGDIVTVKVMGV 700
Query: 906 --QKNRYQVFL 914
K R Q+ +
Sbjct: 701 DLAKKRIQLTM 711
>gi|392964874|ref|ZP_10330294.1| Tex-like protein protein-like protein [Fibrisoma limi BUZ 3]
gi|387846257|emb|CCH52340.1| Tex-like protein protein-like protein [Fibrisoma limi BUZ 3]
Length = 719
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 150/685 (21%), Positives = 270/685 (39%), Gaps = 156/685 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV + AI D +K L L KR
Sbjct: 47 VPFIARYRKEATASL------DEVQ------------------IQAIKDTYQKLLDLDKR 82
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ A+ K +E+ + L + + LE+ ++ E++D+ L F
Sbjct: 83 RDAIL----KSIDEQGK-------------LTPELRRKLESVDSMTELEDLYLPF----- 120
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+PKR T+ + + GL E + D + +E
Sbjct: 121 ------------KPKRKTRATVAIERGL--------------------EPLADLIFSQRE 148
Query: 257 T-PEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
E +A + + LQGAR + A IS + R+ +R++F A++++
Sbjct: 149 NDVERIAKRYVNDQVPTVADALQGARDIMAERISEDADARQRIRNLFEREAIITSKVKKG 208
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
D+ + + + +PLR+ + L I++ E E +L V+I ED+ +
Sbjct: 209 KDAEGAKYRDY----FDFAEPLRRVPSHRLLAIRRGEAEGILAVSISPDEDAAVERL--- 261
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
E G+ S +Q L ++D L PS+ E +A + + L
Sbjct: 262 -ERQFLRGLPGS----KEQVALAIRDGYKRLLKPSLETEFDKQSKDKADQEAIRIFADNL 316
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ P ++ RVLA PG + V LD+ G ++L +
Sbjct: 317 RQLLLSPPLGQQ------------RVLAI--DPGYRTGCKVVCLDAQG---NLLTDAVIY 359
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
+ + + QQ+ + + + ++ +D A+ + + + E + ++
Sbjct: 360 IAQSDAQKQQATQTVRRLVEQYKID---------AIAIGNGTAGRETEEFVREL------ 404
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
++G S+ E +Y S ++ ++ P + V+ AV++GR L +PLA + +
Sbjct: 405 NLGK-----SLFMVSEQGASVYSASEVAREEFPDKDVTVRGAVSIGRRLMDPLAELVKID 459
Query: 614 ---CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
G G+ L+N L + V+ NQVG+ +N A L+
Sbjct: 460 PKSIGVGQYQHDVDQTDLKNSL---------DTVVESCVNQVGVSLNTA-----SAYLLR 505
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
++SGLGP+ A ++ + GA +R LG K F A GFLR+ +
Sbjct: 506 YVSGLGPQLAGNIVAYRAQNGAFTSRDQLKKVPRLGPKAFEQAAGFLRIEGARNP----- 560
Query: 731 FIDLLDDTRIHPESYGLAQELAKEV 755
LD++ +HPE Y L + +A +V
Sbjct: 561 ----LDNSAVHPERYALVERMATDV 581
>gi|170761041|ref|YP_001785504.1| RNA-binding protein [Clostridium botulinum A3 str. Loch Maree]
gi|169408030|gb|ACA56441.1| RNA-binding protein [Clostridium botulinum A3 str. Loch Maree]
Length = 718
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 168/724 (23%), Positives = 301/724 (41%), Gaps = 133/724 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A G+ L G+ ED K + + K
Sbjct: 106 RPKRRTRATIAEEKGLKPLA----------GIILE----GNFKEDIKVYASKFVNEEK-- 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC-----PTPDGDSAIDSF 323
+ + LQGA + + IS E RK++R+ + V+ T PTP + +
Sbjct: 150 EVKTIEEALQGAMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTP-----YEMY 204
Query: 324 HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ + ++ ++ + L I + E+EK+L + ED K+ K L
Sbjct: 205 YDY-------KENVKNIPPHRILAINRGEKEKILTAKVTCNED---KIIDYLKSRSLKGN 254
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
A + E +KD+L + PS+ +E RS ++ + + + + + L + P
Sbjct: 255 KETDAYI-----EESVKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K + + PG + +LD +G+++D T + +
Sbjct: 310 IKDK--------------VVLGYDPGFRTGCKIAVLDETGKLLD---TATVYATAPQNDV 352
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
+ S K +E + K+ +D V+ LG S S E+I KM++E + G +
Sbjct: 353 EGSIKILKELIYKYDVD----VISLGNGTASRES-----EEVISKMLKEIKEEKGKD--- 400
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ V E+ +Y S++++++ P +++ A+++GR LQ+PLA + + G G+
Sbjct: 401 IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQ 460
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L G++E D N VG+D+N A + L +ISG+
Sbjct: 461 YQHDVSQKKLDESLK-----GVVE----DCVNAVGVDLNTATP-----SLLSYISGINSS 506
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ G RK+ + LG+K F GFLRV S + LD+T
Sbjct: 507 IAKNIVAYREEVGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEP---------LDNT 557
Query: 739 RIHPESY-------GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
+HPESY L Q K+V N ++ D++D + + ++ + ++ D+ K LLD
Sbjct: 558 GVHPESYEGTKKFLSLLQYDTKDVKNNKLQ-DIDDRVN--NIGLDDICNKIDIGKPTLLD 614
Query: 792 RHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT-LAEGRVV 850
IKE K+ + D R +P + +G + T L V+
Sbjct: 615 -IIKEIKKPGR----------------DPREDLPKP------ILKTGIVDITQLKPDMVL 651
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY 910
TVR V A + G++ SD + L D + GDI+ +I + + R
Sbjct: 652 MGTVRNVADFGAFVDIGVHQDGLVHISQLSDSFVKHPL-DIVKVGDIVEVRILEVDRKRN 710
Query: 911 QVFL 914
++ L
Sbjct: 711 RISL 714
>gi|375011334|ref|YP_004988322.1| transcriptional accessory protein [Owenweeksia hongkongensis DSM
17368]
gi|359347258|gb|AEV31677.1| transcriptional accessory protein [Owenweeksia hongkongensis DSM
17368]
Length = 709
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 127/551 (23%), Positives = 223/551 (40%), Gaps = 91/551 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR TK S + GL +A M E+ D E A F
Sbjct: 107 KPKRKTKASVAREKGLEPLAGTL---------------MKQEITDV----EGFAMRFVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ L GAR + A ++ R VR +F A +S + + +
Sbjct: 148 EVTDVEDALSGARDIIAEWVNERAFARNKVRQLFSRKAEISAKVVKSKADEAEKYRDY-- 205
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ +PL++ + L I++AE E LL+V I L ED D ++ G ++++
Sbjct: 206 --FDFAEPLKRCPSHRMLAIRRAEAEGLLRVHILLDEDEA----LDILDNIFVKGRNEAS 259
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ Q ++ +KDA L PS+ E ++ +A + + + L + P K
Sbjct: 260 E----QVQIAVKDAYKRLLAPSLETEFKNSSKEKADDEAIKVFAENLRQLLMAPPLGPK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD---QQ 504
RVLA PG + V LD G + L ++N+ Q
Sbjct: 315 -----------RVLAI--DPGFRTGCKVVCLDEQGGL----------LSNENIYPHPPQS 351
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
+L + M ++ + +G N + +D I KM H
Sbjct: 352 ESGQAAAKLSRLMESYKLEAIAIG--NGTAGRETEDF--IQRKM---------HLPKGTE 398
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
+ +E+ +Y S+++ ++ P V+ AV++GR L +PLA + + + ++
Sbjct: 399 VYVVNEAGASIYSASKVAREEFPTYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQ 458
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+N L ++ V+ NQVG+++N A L ++SGLGP+ A ++
Sbjct: 459 HDVDQNKLKQS-----LDNVVESTVNQVGVNLNTASKH-----LLTYVSGLGPKLAENIV 508
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
+ GA +RK+ GLG K F + GFLR+ LD++ +HPES
Sbjct: 509 KHRDENGAFTSRKELKKVAGLGPKAFEQSTGFLRIANGDNP---------LDNSAVHPES 559
Query: 745 YGLAQELAKEV 755
Y + +++AK++
Sbjct: 560 YSIVEKMAKDM 570
>gi|220927810|ref|YP_002504719.1| RNA binding S1 domain-containing protein [Clostridium
cellulolyticum H10]
gi|219998138|gb|ACL74739.1| RNA binding S1 domain protein [Clostridium cellulolyticum H10]
Length = 718
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 185/852 (21%), Positives = 343/852 (40%), Gaps = 177/852 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE V + ND R + ++ L + +LD++
Sbjct: 32 IPFIARYRKE-------------VTGELNDQVLR----ELNERLVYLRNLDER------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
E+ RR+ +E +L + I KSL++A T +E++D+ + L
Sbjct: 68 ------------REDVRRLIEE-----QGKLTEEIVKSLDSAMTLQEIEDIYRPYKL--- 107
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
KR T+ S + GL +A+ YS QL + S+
Sbjct: 108 --------------KRKTRASVAREKGLEPLATII-YS--QLPTKTSIN----------- 139
Query: 257 TPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
E+AS + + NS ++GA + A E+S RK +R I N +V +
Sbjct: 140 ---EIASRYINEEKGINSVDEAIKGALDIIAEEVSDNAEFRKVLREIIFKNGLVMSFGKK 196
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
D DS ++ F ++P+ K + L + + E+E L V I L ED
Sbjct: 197 DEDSVYRMYYDF-------KEPVSKIARHRVLALNRGEKEDFLSVKIDLNEDL------- 242
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
C S+ + + + E ++D+ + PS+ ++ R+ ++ A+ + + +
Sbjct: 243 CLNFLKSNTLKNTNTEMSKYVESAVEDSFKRLIFPSLERDIRNQLTELAEDQAIKVFSEN 302
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLT 494
L N + P + RV+ + ++D +G+V++ T
Sbjct: 303 LRNLLLQPPVK-------------DRVVLGLDPAYRTGCKLAVVDGTGKVLET--TVIYP 347
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
QN D+ KK + + ++ ++ +G S + +I+ + +++E R
Sbjct: 348 TPPQNKIDEAKKKVKEL-----IKKYEVDIISIGN---GTASKESEIF--VADLLKEIDR 397
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
+V + + E+ +Y S++ +++ P ++ AV++ R LQ+PLA + +
Sbjct: 398 EVYY-------MVVSEAGASVYSASKLGAEEFPDFDVALRSAVSIARRLQDPLAELVKID 450
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP-LQFIS 673
+ ++ + L DE G V+ D N VG+D+N A AP L ++S
Sbjct: 451 PKAIGVGQYQHDMNQKRL--DESLG---GVVEDCVNNVGVDLNTA------SAPLLSYVS 499
Query: 674 GLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
G+ A ++ G R + LG K F GFLR+ G+ +
Sbjct: 500 GISTAIAKNVVEYREENGKFKARNELKKVKKLGNKTFEQCAGFLRI-TDGE--------N 550
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRH 793
+LD+T +HPESY A+ L ++ + ++E VR + K LD
Sbjct: 551 ILDNTSVHPESYKAAKLLLEK----------------MGYSLEDVRAK----KLSGLDNK 590
Query: 794 IKEKKRENKRE-------TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
+++ E TL I EL+ +D R++ +P + + + L +
Sbjct: 591 VQQAGMSRIAEELGIGVPTLKDIINELLKPGRDPRDELPKPMLHSDVLHM-----EDLKQ 645
Query: 847 GRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQ 906
G ++ TVR V A + G++ +D + + + D + GDI+ KI +
Sbjct: 646 GMILTGTVRNVADFGAFVDIGVHQDGLVHISQLADKYVKNPM-DVVAVGDIVKVKILEVD 704
Query: 907 KNRYQVFLVCRE 918
R ++ L +E
Sbjct: 705 VERKRISLTMKE 716
>gi|373117996|ref|ZP_09532135.1| hypothetical protein HMPREF0995_02971 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371667917|gb|EHO33033.1| hypothetical protein HMPREF0995_02971 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 721
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 213/504 (42%), Gaps = 80/504 (15%)
Query: 257 TPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS-IFMDNAVVSTCPT 313
PEE A F +++ LQGA + A IS + +RK +R ++ ++VS
Sbjct: 137 APEEAAGAFIDPEKGVETAEDALQGASDIIAERISDDADIRKRLRELVWKKGSLVSAAAA 196
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+ + + + + PL + + Q L I + E E +L+V++++ ++
Sbjct: 197 KEPEDTVYRLY------YAFRSPLNRVQGHQVLAINRGEREGVLKVSVEMEREAA---LI 247
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ L+ G A + +DA D + PS+ +E RSL++ +A + +G
Sbjct: 248 PVRRAVLNPGAPAMAFVRAAA-----EDAYDRLIFPSVEREMRSLLTEQADEGAIKMFGL 302
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L + P + + PG + ++D++G+V+D
Sbjct: 303 NLKPLLMQPPVKG--------------FVTMGLDPGYRNGCKVAVVDATGKVLD------ 342
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
T Q+ K+ + L K + H + +G S + +M E
Sbjct: 343 -TAVVYPTFSQRKKEEAIDTLAKLIRRHGVAHIAIGNGTASRET---------EQMTVEL 392
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
R +G + + + +E+ +Y S++++++ P N++ AV++ R LQ+PLA +
Sbjct: 393 IRRLGGGVSYMIV---NEAGASVYSASKLAAEEFPDYDVNLRSAVSIARRLQDPLAELVK 449
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ L+ L+ G++E D N VG+D+N A AP
Sbjct: 450 IDPKSIGVGQYQHDMPQARLDETLS-----GVVE----DCVNAVGVDLNTA------SAP 494
Query: 669 L-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L +++GL A ++ + GA TRK + LG K F GFLRV S
Sbjct: 495 LLSYVAGLNNTTARNIVKYREENGAFTTRKGVLKVPKLGPKAFEQCAGFLRVPESR---- 550
Query: 728 SSQFIDLLDDTRIHPESYGLAQEL 751
++LD T +HPESYG A+ L
Sbjct: 551 -----NVLDHTGVHPESYGAAEAL 569
>gi|325662483|ref|ZP_08151086.1| hypothetical protein HMPREF0490_01826 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471179|gb|EGC74404.1| hypothetical protein HMPREF0490_01826 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 717
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 152/689 (22%), Positives = 291/689 (42%), Gaps = 158/689 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ND+ R+ H+ L + +L+ +K+
Sbjct: 31 IPFIARYRKEATGSL-------------NDEQLRS----LHERLIYLRNLE------EKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L S EE ++ +E R+ Q+ ++ ++L A E +L+ P
Sbjct: 68 EQVLASI------EEQGKLTEELRV----QIINA--QTLVAVE------------DLYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL E L L L+K+ LE
Sbjct: 104 -----------YRPKRRTRATIAKEKGL-----------EPLAAILMLQKIQKPLE---- 137
Query: 257 TPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
E A + A ++ + + GA+ + A +S E R ++R++ + +++
Sbjct: 138 ---EEAQKYISAEKEVHTVEEAIAGAKDILAETVSDEADYRSFIRNLTVKEGKMTSSAKD 194
Query: 315 DG-DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D S + ++ F E+P+ + + L + + E+EK+L V I+ PE+ + +
Sbjct: 195 DSVQSVYEMYYSF-------EEPVSRLAGHRILALNRGEKEKILNVKIEAPEEKILRYLE 247
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
K+ +S+ S L + +D+ + P++ +E RS ++ +A+ + +GK
Sbjct: 248 --KKIIVSENPYTSEYLKE-----VAEDSYKRLIAPAIEREIRSSLTEKAEDSAITVFGK 300
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFT 490
L + P + + W P + ++D +G+V+D V++
Sbjct: 301 NLEQLLMQPPIVGQ--------------VVLGWDPAFRTGCKLAVVDETGKVLDTTVIYP 346
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
T Q + Q+ K+ ++L++ + H+ ++ N + + + I+ ++++
Sbjct: 347 TAPT-TPQKI---QAAKDTLKKLIR-----KYHITLISVGNGTASRESE---MILVELLK 394
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E P V + V +E+ +Y S++++++ P + A ++ R LQ+PLA +
Sbjct: 395 EIPEKVQY-------VIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLAEL 447
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L L+ G++E + N+VG+D+N A
Sbjct: 448 VKIDPKSIGVGQYQHDMNQKKLSEALS-----GVVESCV----NRVGVDLNTA------S 492
Query: 667 APL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
APL +ISG+ A ++ G +RK+ + LG K F GFL++
Sbjct: 493 APLLSYISGISSAIAKNIVAYREEHGKFQSRKELLKVAKLGPKAFEQCAGFLKITDGKNP 552
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKE 754
LD T +HPESY A++L K+
Sbjct: 553 ---------LDATSVHPESYEAAEKLLKQ 572
>gi|239623425|ref|ZP_04666456.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522391|gb|EEQ62257.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 714
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 212/484 (43%), Gaps = 68/484 (14%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGV 329
+++ +QGA+ + A IS R Y+R+ M+ VV + D + S ++
Sbjct: 150 VETAEEAIQGAKDILAERISDNAEYRTYIRNATMNKGVVQSSAK---DEKVQSVYEMY-- 204
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ 389
+ E+P++K + L + + E EK+L V + PED + L K+ + D +
Sbjct: 205 -YNYEEPVKKCAGHRVLALNRGENEKILTVKVLAPEDQI--LMYLEKQTIVRDNPHTTPV 261
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN 449
L + D+ + PS+ +E RS ++ RA+ + +GK L + P +
Sbjct: 262 LKE-----VAADSYQRLIGPSIEREIRSELTERAEEGAIKVFGKNLEQLLMQPPIVGR-- 314
Query: 450 DITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
+ W P + ++DS+G+V+D + Q+K
Sbjct: 315 ------------VVLGWDPAFRTGCKLAVVDSTGKVLDTVVIYPTA--------PQNKVA 354
Query: 509 DQERLLK-FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+ ++++K F+ + ++ +G S S +II ++++E V + V
Sbjct: 355 ESKKIVKDFIKKYDISLISVGNGTASRES-----EQIIVELLKEIKEPVQY-------VI 402
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
+E+ +Y S++++++ P + AV++ R LQ+PL+ + + P S +
Sbjct: 403 VNEAGASVYSASKLATEEFPNFDVGQRSAVSIARRLQDPLSELVKI-DPK----SIGVGQ 457
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
++ + +E V+ D N+VG+D+N A + L+++SG+ A ++
Sbjct: 458 YQHDMNQKHLGETLEGVVEDCVNKVGVDLNTA-----SASLLEYVSGINKALAKNIVAYR 512
Query: 688 VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
GA RK + LG K F GF+R+ G+ + LD T +HPESY
Sbjct: 513 EENGAFKNRKQLLKVAKLGPKAFEQCAGFMRI-TGGE--------NPLDGTSVHPESYEA 563
Query: 748 AQEL 751
A++L
Sbjct: 564 ARKL 567
>gi|392969991|ref|ZP_10335400.1| putative transcriptional accessory protein [Staphylococcus equorum
subsp. equorum Mu2]
gi|392511919|emb|CCI58605.1| putative transcriptional accessory protein [Staphylococcus equorum
subsp. equorum Mu2]
Length = 716
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 213/506 (42%), Gaps = 77/506 (15%)
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
T E A F + +A ++GA+ + A +S P KY I D T
Sbjct: 137 TIENKAQQFLNEEIETIEAAIKGAQDIIAELVSDAP---KYRTKILKDTFQHGNIITQKK 193
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF--SD 374
+A D F+ + + +P++K + + L + + E+EK+L V +++ + ++
Sbjct: 194 KNAEDEKEIFS-MYYDYSEPVKKIANHRVLAVNRGEKEKVLSVKLEMDTQGIENFIRKNE 252
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
++ D + + A +KD+L ++PS+ +E R ++ +A++ + + +
Sbjct: 253 ITTNHEGDYIIEDA----------IKDSLKRLIMPSIEREIRGDLTEKAENHAIDVFSEN 302
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLT 494
L N + P + K + A R C P TFV + G V++
Sbjct: 303 LRNLLLQPPLKGKQ---ILGVDPAFRT-GCKLAVINPFGTFV---AKG----VMYPHPPI 351
Query: 495 LRSQNVRDQQSKKNDQERL-LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
+KK D E++ +KF+ D+ ++ +G S + + + M++EH
Sbjct: 352 ----------NKKADAEKIFVKFVKDYDVELIAIGNGTASRET-----EQFVASMIQEHH 396
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
V + +E+ +Y S ++ + P + + AV++GR +Q+PL+ + +
Sbjct: 397 LKV-------QFIIVNEAGASVYSASEVARTEFPDFQVEERSAVSIGRRVQDPLSELVKI 449
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ LE LT V+ NQVG+D+N A + L
Sbjct: 450 DPKSIGVGQYQHDVNQKALEAALTF---------VVETTVNQVGVDVNTASR-----SLL 495
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
Q++SGL P A ++ GAI D LG K F ++GFLR+ +
Sbjct: 496 QYVSGLSPTIAQNIINYREENGAIKHNNDIAKVKRLGAKTFEQSIGFLRIVDGSEP---- 551
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEV 755
LD+T IHPESY +L E+
Sbjct: 552 -----LDNTSIHPESYRATYQLLNEI 572
>gi|403046062|ref|ZP_10901537.1| RNA binding protein [Staphylococcus sp. OJ82]
gi|402764224|gb|EJX18311.1| RNA binding protein [Staphylococcus sp. OJ82]
Length = 716
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 213/506 (42%), Gaps = 77/506 (15%)
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
T E A F + +A ++GA+ + A +S P KY I D T
Sbjct: 137 TIENKAQQFLNEEIETIEAAIKGAQDIIAELVSDAP---KYRTKILKDTFQHGNIITQKK 193
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF--SD 374
+A D F+ + + +P++K + + L + + E+EK+L V +++ + ++
Sbjct: 194 KNAEDEKEIFS-MYYDYSEPVKKIANHRVLAVNRGEKEKVLSVKLEMDTQGIENFIRKNE 252
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
++ D + + A +KD+L ++PS+ +E R ++ +A++ + + +
Sbjct: 253 ITTNHEGDYIIEDA----------IKDSLKRLIMPSIEREIRGDLTEKAENHAIDVFSEN 302
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLT 494
L N + P + K + A R C P TFV + G V++
Sbjct: 303 LRNLLLQPPLKGKQ---ILGVDPAFRT-GCKLAVINPFGTFV---AKG----VMYPHPPI 351
Query: 495 LRSQNVRDQQSKKNDQERL-LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
+KK D E++ +KF+ D+ ++ +G S + + + M++EH
Sbjct: 352 ----------NKKADAEKIFVKFVKDYDVELIAIGNGTASRET-----EQFVASMIQEHH 396
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
V + +E+ +Y S ++ + P + + AV++GR +Q+PL+ + +
Sbjct: 397 LKV-------QFIIVNEAGASVYSASEVARTEFPDFQVEERSAVSIGRRVQDPLSELVKI 449
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ LE LT V+ NQVG+D+N A + L
Sbjct: 450 DPKSIGVGQYQHDVNQKALEAALTF---------VVETAVNQVGVDVNTASR-----SLL 495
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
Q++SGL P A ++ GAI D LG K F ++GFLR+ +
Sbjct: 496 QYVSGLSPTIAQNIINYREENGAIKHNNDIAKVKRLGAKTFEQSIGFLRIVDGSEP---- 551
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEV 755
LD+T IHPESY +L E+
Sbjct: 552 -----LDNTSIHPESYRATYQLLNEI 572
>gi|226947398|ref|YP_002802489.1| RNA-binding protein [Clostridium botulinum A2 str. Kyoto]
gi|226841768|gb|ACO84434.1| RNA-binding protein [Clostridium botulinum A2 str. Kyoto]
Length = 718
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 143/608 (23%), Positives = 260/608 (42%), Gaps = 109/608 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A ++ LE G+ ED K E + K
Sbjct: 106 RPKRRTRATIAEEKGLKPLA------------EIILE--GNFKEDIKVYASEFINEEK-- 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC-----PTPDGDSAIDSF 323
+ + LQGA + + IS E RK++R+ + V+ T PTP + +
Sbjct: 150 EVKTIEEALQGAMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTP-----YEMY 204
Query: 324 HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ + ++ ++ + L I + E+EK+L + ED K+ K L
Sbjct: 205 YDY-------KENVKNIPPHRILAINRGEKEKILTAKVTCNED---KIIDYLKSRSLKG- 253
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+K ++ ++ +KD+L + PS+ +E RS ++ + + + + + L + P
Sbjct: 254 -NKETDVYIEES---VKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K + + PG + +LD +G+++D T
Sbjct: 310 IKDK--------------VVLGYDPGFRTGCKIAVLDETGKLLD-------TATVYATAP 348
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
Q + + L K + + V+ LG S S E+I KM++E + G +
Sbjct: 349 QNDVEGSIKVLKKLIYKYDVDVISLGNGTASRES-----EEVISKMLKEIKEEKGKD--- 400
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ V E+ +Y S++++++ P +++ A+++GR LQ+PLA + + G G+
Sbjct: 401 IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQ 460
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L G++E D N VG+D+N A + L +ISG+
Sbjct: 461 YQHDVSQKKLDESLK-----GVVE----DCVNAVGVDLNTATP-----SLLSYISGINSS 506
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ G RK+ + LG+K F GFLRV S + LD+T
Sbjct: 507 IAKNIVAYREEIGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEP---------LDNT 557
Query: 739 RIHPESY-------GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
+HPESY L Q K+V N ++ D++D + + ++ + ++ D+ K LLD
Sbjct: 558 GVHPESYEGTKKFLSLLQYDIKDVKNNKLQ-DIDDRVN--NIGLDDICNKIDIGKPTLLD 614
Query: 792 RHIKEKKR 799
IKE K+
Sbjct: 615 -IIKEIKK 621
>gi|428202355|ref|YP_007080944.1| transcriptional accessory protein [Pleurocapsa sp. PCC 7327]
gi|427979787|gb|AFY77387.1| transcriptional accessory protein [Pleurocapsa sp. PCC 7327]
Length = 722
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 160/718 (22%), Positives = 267/718 (37%), Gaps = 169/718 (23%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+ S S + LDLL + IPFIA YRKE SL +EV N D
Sbjct: 11 ASECSYSPQQVANVLDLLA-EGATIPFIARYRKERTGSL------DEVQLRNLCD----- 58
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
+ Y + EE I D +A QL D++
Sbjct: 59 ----------------------------RFNYLRELEERKATILDA--IAAQNQLTDALK 88
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
+EA + E++D+ L + +PKR T+ + + GL +A+
Sbjct: 89 SKIEACLNKTELEDLYLPY-----------------KPKRRTRATVAREQGLESLAAFIE 131
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
+ +LE PE K + VL+GA + A +++ +
Sbjct: 132 SLNRPDARIKALE------------PEATQYLSKDKGLETVADVLRGAADILAEKVAEKA 179
Query: 293 CVRKYVRSIFMDNAVVSTCPT---PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+R Y+R + V +C P+G + + + + + + K L +
Sbjct: 180 ELRAYLRDYIFKSGVFVSCIKADYPEGSTKFELYRNY-------QNSVSKIAPHNLLALF 232
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLP 409
+ E E +L + I E + + + + + D +++LKDA + L P
Sbjct: 233 RGEAEGILSLDIAFDE-------ATALSYLETQEIRTKNPVIGDFYQIMLKDAFNRLLKP 285
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG 469
S+V+E RS K W +E K E R L G
Sbjct: 286 SLVREVRS----ERKQWADLESIKTF--------------------EVNLRHLLLSSPAG 321
Query: 470 -KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS---KKNDQERLLKFMMDHQPHVV 525
KP +G V +L L Q + S + E + + + ++ ++
Sbjct: 322 MKPTLAIDPGFRTGCKVAILCATGQFLEYQTIFPHSSPGERTKASETIKQLLKKYRIELI 381
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+G N + + D+ + K +EE P V IV +ES +Y S ++ +
Sbjct: 382 AIG--NGTASRETDEFVAEVLKTIEEKPIKV--------IV--NESGASVYSASEVARAE 429
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR-------EILSWKLCPLENFLTP 634
P V+ A+++GR LQ+PLA + + G G+ ++L KL
Sbjct: 430 FPDLDVTVRGAISIGRRLQDPLAELVKIEPKSIGVGQYQHDVEQKLLKQKLA-------- 481
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+ + N VG+D+N A +E L ++SG+ P A ++ R GA
Sbjct: 482 --------ETVESCVNYVGVDLNTA-SKEL----LTYVSGITPTIANNIIAYRDRNGAFR 528
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
RK+ + LG K F A GFLR+R LD+T +HPESY + + +A
Sbjct: 529 DRKELLKVSKLGPKAFEQAAGFLRIRDGDNP---------LDNTAVHPESYPVVEAIA 577
>gi|336421024|ref|ZP_08601184.1| hypothetical protein HMPREF0993_00561 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336002383|gb|EGN32492.1| hypothetical protein HMPREF0993_00561 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 717
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 193/857 (22%), Positives = 342/857 (39%), Gaps = 192/857 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE +L +++ R H+ L + +L+ +K+
Sbjct: 31 IPFIARYRKEATGTL------------DDEQLRR-----LHERLTYLRNLE------EKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L S EE ++ +E R QQ+ AAET V+D L+ P
Sbjct: 68 EQVLSSI------EEQGKLTEELR----QQIL--------AAETLVVVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL E L +SL+K +ED
Sbjct: 104 -----------YRPKRRTRATIAKEKGL-----------EPLAAVISLQKTERPVED--- 138
Query: 257 TPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPT 313
+A F ++ + V+ GA+ + A IS E R ++R I M V+S
Sbjct: 139 ----LAKEFINPEKEVHTVEEVIAGAKDIIAENISDEADYRIWIRKITMQKGRVISAAKN 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+S + ++ F E+P+ + + L + + E+EK L V I+ PE+ + +
Sbjct: 195 EKAESVYEMYYDF-------EEPVGRLAGHRILALNRGEKEKFLTVKIEAPEEDIIR--- 244
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLM 429
YL K+ N ILKD ++ + P++ +E RS ++ RA+ +
Sbjct: 245 -----YLQ---KKTIHGENPYTTPILKDVTEDSYKRLIAPAIEREIRSELTERAEDGAIE 296
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--D 486
+ K L + P VL W P + ++D +G+V+
Sbjct: 297 VFKKNLEQLLMQPPI------------VGQTVLG--WDPAFRTGCKLAVVDPTGKVIGTT 342
Query: 487 VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
V++ T + + Q + + + L +V S + +++ I
Sbjct: 343 VIYPTAPT----------TPQKIQASKDLLKKIIKKYNITLISVGNGTASRESEMF--IV 390
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
++++E P+ V + V +E+ +Y S+++S++ P + A ++ R LQ+P
Sbjct: 391 ELLKEIPQKVQY-------VIVNEAGASVYSASKLASEEFPKFDVGQRSATSIARRLQDP 443
Query: 607 LAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHR 662
LA + + G G+ L L+ G++E D N+VG+D+N A
Sbjct: 444 LAELVKIDPKSIGVGQYQHDMNQKKLSEALS-----GVVE----DCVNKVGVDLNTA--- 491
Query: 663 EWQFAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRR 721
APL +ISG+ A ++ G +R+ + LG K + GF+R++
Sbjct: 492 ---SAPLLAYISGISAAIAKNIVAYREENGKFTSRRQLLKVAKLGPKAYEQCAGFMRIQG 548
Query: 722 SGQAASSSQFIDLLDDTRIHPESYGLAQELAKE--VYNRDIEGDLNDDEDALEMAIEHVR 779
LD T +HPESY A+ L K+ DI+G L + I++ +
Sbjct: 549 GDNP---------LDGTSVHPESYEAAERLLKKQGYKPEDIDG---GKLTGLSLTIKNYK 596
Query: 780 DRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGE 839
+ L E TL I +EL +D R++ +P + E
Sbjct: 597 SLAEEL--------------EIGEITLMDIVKELEKPARDPRDEMPKPILRTDVL----E 638
Query: 840 TEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILT 899
+D L EG +++ TVR V + G++ + +D + + GDI+
Sbjct: 639 MKD-LTEGMILKGTVRNVIDFGVFVDIGVHQDGLVHISEITDKKFIKHPLEVVSVGDIVD 697
Query: 900 CKIKSI--QKNRYQVFL 914
K+ S+ +K R Q+ +
Sbjct: 698 VKVLSVDLKKKRIQLTM 714
>gi|187777235|ref|ZP_02993708.1| hypothetical protein CLOSPO_00782 [Clostridium sporogenes ATCC
15579]
gi|187774163|gb|EDU37965.1| Tex-like protein N-terminal domain protein [Clostridium sporogenes
ATCC 15579]
Length = 718
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 142/600 (23%), Positives = 260/600 (43%), Gaps = 93/600 (15%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + GL +A LE G+ ED K + + K
Sbjct: 106 RPKRRTRATIAEGKGLKPLAETI------------LE--GNFKEDIKVYASQFVNEEK-- 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ + LQGA + + IS E RK++R+ + V+ T + + ++ +
Sbjct: 150 EVKTIEDALQGAMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESKEPTPYEMYYDY-- 207
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
++ ++ + L I + E+EK+L + ED K+ K L +K
Sbjct: 208 -----KENVKNIPPHRILAINRGEKEKILTAKVTCNED---KIIDYLKSRSLKG--NKET 257
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
++ ++ +KD+L + PS+ +E RS ++ + + + + + L + P + K
Sbjct: 258 DIYIEES---VKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAPIKDK- 313
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
+ + PG + +LD +G++++ T + + + S K
Sbjct: 314 -------------VVLGYDPGFRTGCKIAVLDETGKLLN---TATVYATAPQNDVEGSVK 357
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E + K+ +D V+ LG S S E+I KM++E + G + + V
Sbjct: 358 ILKELIYKYDVD----VISLGNGTASRES-----EEVIAKMLKEIKEEKGKD---IYYVI 405
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSW 623
E+ +Y S++++++ P +++ A+++GR LQ+PLA + + G G+
Sbjct: 406 VSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDV 465
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
L+ L G++E D N VG+D+N A + L +ISG+ A ++
Sbjct: 466 SQKKLDESLK-----GVVE----DCVNTVGVDLNTATP-----SLLSYISGINSSIAKNI 511
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
G RK+ + LG+K F GFLRV S + LD+T +HPE
Sbjct: 512 VAYREEVGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEP---------LDNTGVHPE 562
Query: 744 SY-GLAQELAKEVYN-RDIEGDLNDDEDAL--EMAIEHVRDRPDLLKTYLLDRHIKEKKR 799
SY G + L+ Y+ D++ + D DA I+H+ ++ D+ K LLD IKE K+
Sbjct: 563 SYEGTKKFLSLLEYDVNDVKNNKLQDIDARVNNTGIDHICNKIDIGKPTLLD-IIKEIKK 621
>gi|373955311|ref|ZP_09615271.1| Tex-like protein [Mucilaginibacter paludis DSM 18603]
gi|373891911|gb|EHQ27808.1| Tex-like protein [Mucilaginibacter paludis DSM 18603]
Length = 756
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 173/731 (23%), Positives = 295/731 (40%), Gaps = 170/731 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +LSI+ + + LL + +PFI+ YRKE SL +EV
Sbjct: 7 KIADELSITEKQVNATIGLLD-EGATVPFISRYRKELTGSL------DEVQ--------- 50
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI D ++ L KR+ A+ + T L +L
Sbjct: 51 ---------VAAIRDRMQQLRELDKRREAI--------------LKSLTELG---KLTPQ 84
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ +++ AAE+ ++D+ L + RPKR T+ S + GL +A
Sbjct: 85 LEQAVNAAESMTILEDIYLPY-----------------RPKRKTRASVAREKGLQPLADV 127
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+L LQ EK D LE T +E L GAR + A I+
Sbjct: 128 ILLQG-KLDLQAEAEKYID-LEKGVSTLDE---------------ALAGARDIIAEHIAE 170
Query: 291 EPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR----EKPLRKFEDAQWL 346
+R +R +F++ T + + + G+K+ ++PL+ + L
Sbjct: 171 NAELRTQIRQVFLEKGEFQT--------KVIAGKEEEGIKYKDYFDWKEPLKTAPSHRIL 222
Query: 347 LIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+++AE+E++L + + PE+ N L + + K +Q +L + D
Sbjct: 223 AMRRAEKEEILWLDVLPPEE--NAL------QIIENQFVKGNNNCTEQVKLAVADGYKRL 274
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
L PSM E R L +A + + + + + P +K RVLA
Sbjct: 275 LKPSMETEVRLLTKKKADEEAIRVFAENIRQLLLGAPLGQK------------RVLAI-- 320
Query: 467 GPG-KPETTFVMLDSSGEVVD--VLF--TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQ 521
PG + V LD G++++ ++ TG L+ D E+ +K +
Sbjct: 321 DPGFRTGCKVVCLDEQGQLLENTAIYPHTGAGNLK------------DAEKTIKHL---- 364
Query: 522 PHVVVLGAVNLSCTSLKDDIYEI----IFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
CT + I + E R G + ++IV +ES +Y
Sbjct: 365 ------------CTQFNIEAIAIGNGTAGRETETFIR--GLNLAGVAIVMVNESGASVYS 410
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
S I+ ++ P + V+ AV++GR L +PLA + + + ++ +N L +
Sbjct: 411 ASEIAREEFPDKDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKL----Q 466
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRK 697
+ + VM V N VG+++N A + L +ISGLGP+ A ++ + GA R
Sbjct: 467 LALDDTVMSSV-NAVGVELNTASKQ-----ILAYISGLGPQLAQNIIDYRNKNGAFKRRG 520
Query: 698 DFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYN 757
D LG K F A GFLR+R + LD + +HPE Y L +++AK++ N
Sbjct: 521 DLRQVARLGDKAFEQAAGFLRIRNADNP---------LDSSGVHPERYALVEQMAKDL-N 570
Query: 758 RDIEGDLNDDE 768
+++ DL DE
Sbjct: 571 CNVK-DLMQDE 580
>gi|326790718|ref|YP_004308539.1| Tex-like protein [Clostridium lentocellum DSM 5427]
gi|326541482|gb|ADZ83341.1| Tex-like protein [Clostridium lentocellum DSM 5427]
Length = 711
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 139/624 (22%), Positives = 259/624 (41%), Gaps = 122/624 (19%)
Query: 153 RRIYDETRLALNQQLFDSI----------SKSLEAAETEREVDDVDLKFNLHFPPGEVGV 202
R Y + LA +Q+ SI +++E A T EV+D+ L +
Sbjct: 56 RYTYLQNLLARKEQVLKSIEEQGKLTVELKQAIEMATTATEVEDLYLPY----------- 104
Query: 203 DEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMA 262
RPK+ T+ + + GL E L + ++++ D K+ +E
Sbjct: 105 ------RPKKRTRATIAKERGL-----------EPLAELIKMQQVSDIETIAKDYIDEEK 147
Query: 263 SNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR-SIFMDNAVVSTCPTPDGDSAID 321
+A L+GA+ + A EIS +R Y+R + F +V+ + D
Sbjct: 148 G------VGDVKAALEGAKDILAEEISDRADLRGYIRKATFSKGLIVTKAKDEKEQTVYD 201
Query: 322 SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLS 381
++ + + L + L I + E+EK+L V I+ P + + YL
Sbjct: 202 MYYDY-------NEKLSNMPGHRILAINRGEKEKVLTVKIEAPVEEIMT--------YLE 246
Query: 382 DGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
V + E +L+D+ + P++ ++ R+ ++ +A+ L + K L+ +
Sbjct: 247 RQVIIKESTTHLLLEEMLQDSYKRLIAPAIERDIRNELTAKAEDGALEVFKKNLYQLLMQ 306
Query: 442 GPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVR 501
P K + + + P C ++D +G+ +D T QN +
Sbjct: 307 API--KGHQVMGID---PAFRTGC--------KIAVVDETGKKLD--KTVVFPTAPQN-K 350
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
+++K ++ + K+ +D +L N + + + E+ D+ E++
Sbjct: 351 TEEAKVVLKDLIKKYKVD------LLSIGNGTAS-----------RETEKFVADMLQEIN 393
Query: 562 E-LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGP 616
E + V +E+ +Y S +++++ P V+ AV++ R LQ+PLA + + G
Sbjct: 394 ETIHYVIVNEAGASVYSASVLATEEFPNDDVGVRSAVSIARRLQDPLAELVKIDPKAIGV 453
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
G+ LE L G++E + N+VG+DIN A + LQ+++G+
Sbjct: 454 GQYQHDMNQKRLEESLG-----GVVESAV----NEVGVDINTA-----SASLLQYVAGIK 499
Query: 677 PRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLD 736
+ ++ GA +R + GLG KVF GFLR+ + LD
Sbjct: 500 KTVSQNIIAYREEVGAFKSRSEIKKVKGLGPKVFEQCAGFLRITNGK---------NFLD 550
Query: 737 DTRIHPESYGLAQELAKEV-YNRD 759
T +HPESY +A+EL K V Y +D
Sbjct: 551 ATGVHPESYAVAEELLKVVGYGKD 574
>gi|295093253|emb|CBK82344.1| Transcriptional accessory protein [Coprococcus sp. ART55/1]
Length = 714
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 189/848 (22%), Positives = 344/848 (40%), Gaps = 177/848 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ND+ R H+ L + +L+ K
Sbjct: 31 IPFIARYRKEATGSL-------------NDEQLRL----LHERLVYLRNLEDK------- 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ EE+ + L D + +E AET VDD L+ P
Sbjct: 67 ----KAQVIASIEEQGK-------------LTDQLRTEIEKAETMVLVDD------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + GL +A+ + LQ++ + E
Sbjct: 104 -----------YRPKRKTRATIAKDKGLEGLAN-------IIMLQMTRTPIVKE------ 139
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV-STCPTPD 315
E S K + ++S+A+ GA + A IS R ++R + + V+ +T P+
Sbjct: 140 -AEAYVSEEK-GVADTSEAI-AGAMDIIAENISDTADYRTHIRDLTTRHGVLRTTAKDPE 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + ++ F+ P+ K + L + + E+EK + V I+ P +N + S
Sbjct: 197 AESVYEMYYDFS-------TPVSKMTGYRTLAVNRGEKEKFITVKIEAP---VNDIISYL 246
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
K+ + ++ Q+ +D + D+ D + P++ +E R+ ++ A+ + + L
Sbjct: 247 KKQIIVRDNPETEQILSDA----IADSYDRLIAPAIEREIRNALTETAEDGAIKVFASNL 302
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ P A VL W P + ++D +G+V+D + +
Sbjct: 303 QQLLMQPPI------------AGQTVLG--WDPAFRTGCKLAVVDPTGKVLDTV----VI 344
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
+ + KN L+K + + L +V S + ++ +I +++ E
Sbjct: 345 FPTAPQKKVAEAKNTVNALIK------KYGITLISVGNGTASRESEM--VIAELISELDT 396
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
V + V +E+ +Y S++++++ P + A ++ R +Q+PLA + +
Sbjct: 397 PVQY-------VITNEAGASVYSASKLATEEFPHFDVGQRSAASIARRVQDPLAELVKID 449
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFIS 673
+ ++ + LT ++ V+ D N+VG+D+N A APL + IS
Sbjct: 450 PKAIGVGQYQHDMNQKKLTE-----ALDAVVEDSVNKVGVDLNTA------SAPLMEHIS 498
Query: 674 GLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
G+ A ++ G TRK+ + LG K F GF+R+ SG + +
Sbjct: 499 GINKTLAKNIVDYREANGRFNTRKELLKVAKLGPKAFEQCAGFMRI--SGGS-------N 549
Query: 734 LLDDTRIHPESYGLAQELAKEV-YNRD--IEGDLNDDEDALEMAIEHVRDRPDLLKTYLL 790
LD T +HPESY +A L + Y D G L D L + +++ + L T +
Sbjct: 550 PLDATSVHPESYDIATALLSHIGYTTDDIASGRLKD----LSKSAGNIKKLAEELGTGTI 605
Query: 791 DRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT--LAEGR 848
TL I +EL +D R++ +P ++ G+ + L EG
Sbjct: 606 --------------TLNDIIKELEKPARDPRDEMPKP-------ILRGDVLEMKDLTEGM 644
Query: 849 VVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSI--Q 906
+++ TVR V A + G++ + SD + L D + GDI+ K+ I
Sbjct: 645 ILKGTVRNVIDFGAFVDIGVHQDGLVHISEMSDKFIKHPL-DVVSVGDIVQVKVIGIDLA 703
Query: 907 KNRYQVFL 914
K R Q+ +
Sbjct: 704 KKRIQLSM 711
>gi|392934502|gb|AFM92599.1| S1 RNA-binding domain-containing protein [Acaryochloris sp.
HICR111A]
Length = 724
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 175/818 (21%), Positives = 302/818 (36%), Gaps = 187/818 (22%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+LSIS I LDL + IPF+A YRKE
Sbjct: 9 AQELSISAQQIQNALDLFA-EGATIPFVARYRKERT------------------------ 43
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
+D+ L R+ + + Y EE I + +A +L DS+
Sbjct: 44 -----------GQMDETQL----RQLSERFTYLSELEERKATILES--IAQQNKLTDSLK 86
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS--- 229
+EA + E++D+ L + RPKR T+ + + GL +A
Sbjct: 87 AKIEACLLKTELEDLYLPY-----------------RPKRRTRATIAKEKGLEPLAQWIQ 129
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEIS 289
+ L L+ E A+ + +++ LQGA + A I+
Sbjct: 130 ALNKPTASLNQALTTE----------------AARYISKEVATAEDALQGASDILAEGIA 173
Query: 290 CEPCVRKYVRS-IFMDNAVVSTCPT--PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWL 346
+ +R ++++ F VS + P+G + + + + R K + L
Sbjct: 174 DQADIRSHLKNRFFQVGEFVSQVKSKYPEGSTKFEMYRSYQA----RAKSIPAH---NLL 226
Query: 347 LIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+ + E E +L+V + + E+ ++ D +E + + + D ++KDA
Sbjct: 227 ALYRGESEGILKVELTIDEE---RILGDIEERVIRSKIPTVRDFYRD----VVKDAYTRL 279
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
+ PS+VKE R+ A + + L + P K P P C
Sbjct: 280 IKPSVVKEVRATCKAEADRESIQTFATNLRELLLSSPAGMK-----PTLGIDPGFRTGC- 333
Query: 467 GPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
V LD +G+ ++ + ++ R+Q +K + + + + ++
Sbjct: 334 -------KVVALDHTGKFLE--YQAIFPHQAAGQREQAAKT-----VARLIQTYNIDLIA 379
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQL 586
+G N + D + K ++ P V +ES +Y S I+ +
Sbjct: 380 IG--NGTAGRETDAFVADVLKTIDRKPIK----------VMVNESGASIYSASEIAIAEF 427
Query: 587 PGQKGNVKRAVALGRYLQNPLAMVATL----CGPG-------REILSWKLCPLENFLTPD 635
PG V+ A+++ R LQ+PLA + L G G +++L KL
Sbjct: 428 PGLDITVRGAISIARRLQDPLAELVKLDPKSIGVGQYQHDVDQKLLKQKL---------- 477
Query: 636 EKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFT 695
E+ + N VG+D+N A +E L F+SG+ A ++ + GA
Sbjct: 478 ------EETVESCVNYVGVDLNTA-SKEL----LTFVSGITGAIANNIITYRNQNGAFKN 526
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
R+ + LG K F A GFLR+R LD+T +HPESY +
Sbjct: 527 RQQLLKVAKLGPKAFEQAAGFLRIRTGDNP---------LDNTAVHPESYSVV------- 570
Query: 756 YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIH 815
+ I DLN + + + + P LK L ++ E E TL I EL
Sbjct: 571 --KAISTDLN-------LPLSQIAEIPARLKPGDLTTYVTEAIGE---PTLKDIMAELEK 618
Query: 816 GFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQAT 853
+D R ++K + E ++ D EG V T
Sbjct: 619 PGRDPRAEFKYATFKEGITKLTDLKPDMELEGIVTNVT 656
>gi|256750897|ref|ZP_05491781.1| RNA binding S1 domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|256750232|gb|EEU63252.1| RNA binding S1 domain protein [Thermoanaerobacter ethanolicus
CCSD1]
Length = 712
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 178/850 (20%), Positives = 346/850 (40%), Gaps = 184/850 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N ++ L + +L++K
Sbjct: 32 IPFIARYRKEATGSLSDEVLRN-----------------FYDRLTYLRNLEEK------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++++ R+ DE +L + I +E A T +EV+D+ F
Sbjct: 68 ------------KQDTIRLIDE-----QGKLTEEIKAKIENATTLQEVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A + G
Sbjct: 106 ------------RPKRRTRATIAKEKGLEPLAKVISSNDVTDG----------------- 136
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A + + + QGA + A +IS + +RKY+RS +N ++ T +
Sbjct: 137 DVEEYAKPYLNENVPTVEEAYQGAMDIIAEDISDDADIRKYIRSFTWNNGIIVTQALKED 196
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDC 375
S + ++ + ++ ++ + L I +AE EK + V I++ E +N+L
Sbjct: 197 RSPYEMYYDY-------KEAVKTIPPHRILAINRAEREKYISVKIEVDSERIINRL---- 245
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ V+K A ++ + + ++D+ + PS+ +E R+ ++ +A+ ++ + + L
Sbjct: 246 ----IESKVNK-ASIFAEYYKRAIEDSYKRLIAPSIEREIRNALTEKAEEKAIIVFKENL 300
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ + P + + + P + ++D +G+++D
Sbjct: 301 KSLLLQPPIKGH--------------VVMGFDPAYRTGCKIAIVDETGKLLDT--ATIYP 344
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
QN D K +LK +++ + V L A+ S + +++ I +++E R
Sbjct: 345 TPPQNDIDNSKK------VLKELIEK--YNVTLIALGNGTASRESEMF--IADLIKELSR 394
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
+V + V +E+ +Y S I +++ P +++ A++L R LQ+PLA + +
Sbjct: 395 EVKY-------VIVNEAGASVYSASPIGTEEFPDINVSLRGAISLARRLQDPLAELVKID 447
Query: 614 ---CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G+ ++ KL N G++E D N VG+D+N A +
Sbjct: 448 PKSIGVGQYQHDVDQKKLGEALN--------GVVE----DCVNSVGVDLNTA-----SVS 490
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L+++SG+ A ++ + G +R+ LG+ F GFLR+
Sbjct: 491 LLKYVSGINTAIAKNIVEYRNQIGKFTSREQLKNVKRLGEATFTQCAGFLRILEGD---- 546
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
++ D T +HPE Y ++L K+ Y ++ + + ++D + L+
Sbjct: 547 -----NIFDSTAVHPERYETLEKLLKKFGYKKET------------LDRKKLKDFANSLE 589
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
Y L+R +E + TLY I EL +D R +P + I + L
Sbjct: 590 EYGLERISEE--YDIGLPTLYDIVSELKKPGRDPREDLPKPILRSDVMTI-----NELKP 642
Query: 847 GRVVQATVRRVQGQRAICVLESGLA--GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
G + TVR V C ++ G+ G++ + S + L D + GDI+ K+ S
Sbjct: 643 GMELMGTVRNVTDFG--CFVDIGVHTDGLVHISEMSQSYIKHPL-DVVAVGDIVKVKVLS 699
Query: 905 IQKNRYQVFL 914
+ R ++ L
Sbjct: 700 VDIERNRISL 709
>gi|384109025|ref|ZP_10009911.1| Transcriptional accessory protein [Treponema sp. JC4]
gi|383869469|gb|EID85082.1| Transcriptional accessory protein [Treponema sp. JC4]
Length = 809
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 221/502 (44%), Gaps = 96/502 (19%)
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSA-----IDSFHQFAGVK 330
LQGA+ + A +S + R V +++ +V+ PDG +A ++ +
Sbjct: 177 LQGAQDIIAERVSQDTKNRDSVHDLYLATGNIVTKGIVPDGQNAEQAEKTSTYQMY---- 232
Query: 331 WLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQL 390
W +PL + + + L I + E E L+VTI + D+ ++D + K A +
Sbjct: 233 WDYSEPLNQVKPHRILAINRGEREGALEVTIDVDVDAA-----------IAD-LQKKATI 280
Query: 391 WNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDND 450
N + ++D + L P++V+E RS + A + + + L N + P +
Sbjct: 281 HNHYHKDAIEDGVVRLLSPAVVREIRSDEADDADDHGIGIFSENLKNLLMQQPIK----- 335
Query: 451 ITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL-RSQNVRDQQSKKN 508
RVL PG + T LD +G+ + G + + Q+ + N
Sbjct: 336 -------GSRVLGV--DPGYRNGTKCAALDETGK-----YLGFFKIFQEQDPQGAYDAIN 381
Query: 509 DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG 568
D + K+ + VL N + + ++ I+ K++ E+ +D E ++V
Sbjct: 382 DA--IDKY------DIQVLAVGNGTGSQ---EVQAIVSKVISENYKDSDVE---FTVV-- 425
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG---REIL 621
DES +Y S +++++ P V+ A+++GR LQ+PLA + + G G ++
Sbjct: 426 DESGASVYSASPVATEEFPDLDVMVRGAISMGRRLQDPLAELVKIDPKAIGVGLYQHDVN 485
Query: 622 SWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAA 681
KL +++V+ V NQVG+++N A + L+++SG+ A
Sbjct: 486 QKKLA------------DQLDEVVGSVVNQVGVNLNTA-----SYMLLKYVSGINVSTAK 528
Query: 682 SLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIH 741
+ G I +R+D GLG K F GFL++ S D LD+T +H
Sbjct: 529 KIVAYRDANGKITSREDLKKVPGLGPKAFEQCAGFLKIAESS---------DPLDNTWVH 579
Query: 742 PESYGLAQELAKEVYNRDIEGD 763
PE+Y ++A+EVY+ +GD
Sbjct: 580 PENY----DVAREVYDAVKKGD 597
>gi|331086265|ref|ZP_08335345.1| hypothetical protein HMPREF0987_01648 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406031|gb|EGG85554.1| hypothetical protein HMPREF0987_01648 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 717
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 151/689 (21%), Positives = 292/689 (42%), Gaps = 158/689 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ND+ R+ H+ L + +L+ +K+
Sbjct: 31 IPFIARYRKEATGSL-------------NDEQLRS----LHEQLIYLRNLE------EKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L S EE ++ +E R+ Q+ ++ ++L A E +L+ P
Sbjct: 68 EQVLASI------EEQGKLTEELRV----QIINA--QTLVAVE------------DLYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL E L L L+++ LE
Sbjct: 104 -----------YRPKRRTRATIAKEKGL-----------EPLATLLMLQRIQKPLE---- 137
Query: 257 TPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM-DNAVVSTCPT 313
E A + A ++ + + GA+ + A +S E R ++R++ + + ++S+
Sbjct: 138 ---EEAQKYISAEKEVHTVEEAIAGAKDILAETVSDEADYRSFIRNLTVKEGKMISSAKD 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
S + ++ F E+P+ + + L + + E+EK+L V I+ PE+ + +
Sbjct: 195 DSVQSVYEMYYSF-------EEPVSRLAGHRILALNRGEKEKILNVKIEAPEEKILRYLE 247
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
K+ +S+ S L + +D+ + P++ +E RS ++ +A+ + +GK
Sbjct: 248 --KKIIVSENPYTSEYLKE-----VAEDSYKRLIAPAIEREIRSSLTEKAEDSAITVFGK 300
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFT 490
L + P + + W P + ++D +G+V+D V++
Sbjct: 301 NLEQLLMQPPIVGQ--------------VVLGWDPAFRTGCKLAVVDETGKVLDTTVIYP 346
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
T Q + Q+ K+ ++L++ + H+ ++ N + + + I+ ++++
Sbjct: 347 TAPT-TPQKI---QAAKDTLKKLIR-----KYHITLISVGNGTASRESE---MILVELLK 394
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E P V + V +E+ +Y S++++++ P + A ++ R LQ+PLA +
Sbjct: 395 EIPEKVQY-------VIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLAEL 447
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L L+ G++E + N+VG+D+N A
Sbjct: 448 VKIDPKSIGVGQYQHDMNQKKLSEALS-----GVVESCV----NRVGVDLNTA------S 492
Query: 667 APL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
APL +ISG+ A ++ G +RK+ + LG K F GFL++
Sbjct: 493 APLLSYISGISSAIAKNIVAYREEHGKFQSRKELLKVAKLGPKAFEQCAGFLKITDGKNP 552
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKE 754
LD T +HPESY A++L K+
Sbjct: 553 ---------LDATSVHPESYEAAEKLLKQ 572
>gi|150399202|ref|YP_001322969.1| RNA-binding S1 domain-containing protein [Methanococcus vannielii
SB]
gi|150011905|gb|ABR54357.1| RNA binding S1 domain protein [Methanococcus vannielii SB]
Length = 722
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 166/755 (21%), Positives = 319/755 (42%), Gaps = 143/755 (18%)
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ + +E +ET E++D+ F RPKR T+ GL ++
Sbjct: 84 VKQKIENSETLTEIEDIYRPF-----------------RPKRKTRAIIAESKGLKPLS-- 124
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
++ L+ LEK +EL P+ ++ + A+F GA+ + A EIS
Sbjct: 125 ------EVILKQKLEKPVEELAKEFLNPKLEVNSIEDAIF--------GAQDIIAEEISD 170
Query: 291 EPCVRKYVRSIFMDNAVVSTCPTPDGD--SAIDSFHQFAGVKWLREKPLRKFEDAQWLLI 348
P RK++R ++ T D D S + ++++ + L K + L I
Sbjct: 171 NPDYRKFIREKTYSKGII-TVKAKDKDLKSVYEMYYEY-------NEQLSKIPRHRILAI 222
Query: 349 QKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN--- 405
+ E+EK+L V I+ P + + + ++ + N + ILKD + +
Sbjct: 223 NRGEKEKILSVKIEPPVE------------LILNWLNGQIIIENSETASILKDTIIDGYK 270
Query: 406 -FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
+ PS+ +E R+ ++ +A+ + + K L + P + K +
Sbjct: 271 RLISPSIEREIRNSLTEKAEEGAISVFSKNLKQLLLQPPIKGK--------------VVL 316
Query: 465 CWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
W P + ++D +G+++D + + + ++KK +E + + +D
Sbjct: 317 GWDPAFRTGCKLAVVDETGKLLD---KDVVYPTEPHNKTLETKKTVKELVNNYNID---- 369
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
+ A+ S + +I I+ ++++E R++ + V +E+ +Y S +
Sbjct: 370 ---IIAIGNGTASRESEI--IVSELLKELDRNLKY-------VIVNEAGASVYSASELGF 417
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDE 636
++ P V+ A ++ R LQ+PLA + + G G+ ++ KL E
Sbjct: 418 EEFPEYDVGVRSAASIARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLS---------E 468
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTR 696
G + + V N VG+D+N A + L ++SG+ A ++ ++ G +R
Sbjct: 469 SLGAVVESCV---NSVGVDLNTA-----SVSLLNYVSGINKEIAKNIVNYRIKNGKFNSR 520
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY 756
K+ + LGKK F GFLR++ +LLD+T +HPESY +A+ L E+
Sbjct: 521 KELLNVKKLGKKAFEQCAGFLRIQNGK---------NLLDNTSVHPESYKIAENLLNELN 571
Query: 757 NRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHG 816
E + N + + IE ++D ++ K L D K TL I REL
Sbjct: 572 LSLNEINYN-KMNKISEKIESIKDIKNIEK--LAD------KLNTGIPTLLDIIRELEKP 622
Query: 817 FQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMK 876
+D R+ ++P + + ED L EG +++ T+R + A + G++
Sbjct: 623 GRDPRDDVEKPVLRSDVL----KFED-LKEGMILKGTIRNIVDFGAFVDIGVHHDGLIHI 677
Query: 877 EDYSDDWRDSELSDKLHEGDILTCKIKSI--QKNR 909
+ SD + L + + GD++ + I +KNR
Sbjct: 678 SEVSDRFIKHPL-EVISVGDVVNVFVLGIDFEKNR 711
>gi|402309577|ref|ZP_10828569.1| Tex-like protein N-terminal domain protein [Eubacterium sp. AS15]
gi|400372233|gb|EJP25181.1| Tex-like protein N-terminal domain protein [Eubacterium sp. AS15]
Length = 714
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 166/761 (21%), Positives = 318/761 (41%), Gaps = 136/761 (17%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L D+I SLE A T +EV+D+ + P +K+ KR T+ S + GL
Sbjct: 79 KLTDNIRVSLEDALTLQEVEDI-------YAP---------FKQKKR-TRASVAKEKGL- 120
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMF--NSSQAVLQGARHM 283
E L L L LE + E E+ A F A + + + GA+ +
Sbjct: 121 ----------EALSLVL-LEGV--------EKVEDRAREFINAELGVENEKDAIDGAKDI 161
Query: 284 AAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID-----SFHQFAGVKWLREKPLR 338
A I+ + ++K +R + D AV+ T D + D + +F+ +
Sbjct: 162 VAEIIADDFELKKTLRKLLFDTAVIMTSAKKDAEEKEDYPVYKMYMEFSEIS-------S 214
Query: 339 KFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
K + L I + E++ +L+V I + K K Y+ + + ++ D
Sbjct: 215 KMPSYRILAINRGEKDDILKVKI---DYDFEKFVEIAKNSYIKSEIHR--EIMTDT---- 265
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
++D+L ++PS+ +E RS M+ RA+ + +G+ L + P + K
Sbjct: 266 IEDSLKRLMMPSLERELRSEMTQRAEEKAISVFGENLSALLMQSPLKNK----------- 314
Query: 459 PRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFM 517
+ W P + ++D +G+V+D T QN ++ +K+ + K +
Sbjct: 315 ---VVLGWDPAYRTGCKIAVVDETGKVLDT--TTVYPTAPQNKVEETNKE-----ITKLI 364
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
++ +++ +G S S E+ D+ + + + E+ +Y
Sbjct: 365 DKYKVNIISIGNGTASRES-------------EQIVADIVKQKENVYYTIVSEAGASVYS 411
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
S++ ++L +++ AV++ R +Q+P++ + + P S + ++ +
Sbjct: 412 ASKLGEEELKDMNVSLRGAVSIARRIQDPMSELVKI-DPK----SIGVGQYQHDVNQKRL 466
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRK 697
++ V+ D N+VG+D+N A ++ L +++G+ P A ++ + AG ++
Sbjct: 467 SEVLSNVVEDNVNKVGIDLNTA-----SYSILGYVAGITPSIAKNIVKYRDNAGKFKNKE 521
Query: 698 DFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYN 757
+ + LG+ F GFLRV+ ++LD+T IHPE+Y +L ++ +
Sbjct: 522 ELLKVTRLGQSCFEQCAGFLRVKEGD---------NILDNTGIHPEAYDKTYKLL-DILD 571
Query: 758 RDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGF 817
DI+ E IE + D KT D K E TL I +EL
Sbjct: 572 VDIQS---------ENFIEDFTKKID--KTSQKDLS---DKLEIGMPTLIDIIKELKKPG 617
Query: 818 QDWRNQYK-EPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMK 876
D R++ P + + + L+EG V++ TVR V A + G++
Sbjct: 618 LDIRDEKNISPVLRSDVLKL-----EDLSEGMVLKGTVRNVLEFGAFVDIGVKNDGLVHI 672
Query: 877 EDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
SD + + + + + GDI+ K+ I +R +V L R
Sbjct: 673 SQLSDKFIKNPM-EVVSIGDIVNVKVIGIDLDRKKVSLSMR 712
>gi|317501909|ref|ZP_07960093.1| YhgF protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088276|ref|ZP_08337195.1| hypothetical protein HMPREF1025_00778 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336440113|ref|ZP_08619712.1| hypothetical protein HMPREF0990_02106 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316896589|gb|EFV18676.1| YhgF protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|330408520|gb|EGG87986.1| hypothetical protein HMPREF1025_00778 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336014462|gb|EGN44311.1| hypothetical protein HMPREF0990_02106 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 717
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 152/687 (22%), Positives = 282/687 (41%), Gaps = 160/687 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL ND+ R K H+ L + +L+ +K+
Sbjct: 31 IPFISRYRKEATGSL-------------NDEQLR----KLHERLLYLRNLE------EKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ + S EE+ + + + + + + AET V+D L+ P
Sbjct: 68 EQVISSI-----EEQGK-------------MTEELKEKILLAETLVTVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A+ L+ KE
Sbjct: 104 -----------YRPKRRTRATIAKEKGLEPLAAYMM------------------LQQAKE 134
Query: 257 TPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPT 313
EE A + + + + + GA+ + A IS R ++R M VVST
Sbjct: 135 PLEETAKQYISEEKEVKTEEEAIAGAKDIIAEIISDNADYRTWIRKTTMKKGKVVSTAKD 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
P+ +S + +++F E+ + K + L + + E+EK+L V ++ PE+ + +
Sbjct: 195 PETESVYEMYYEF-------EESVEKLAGHRILALNRGEKEKILTVKVEAPEEDILRYLE 247
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
K+ ++D ++ L +++D+ + P++ +E R+ ++ +A+ + +GK
Sbjct: 248 --KKTIVNDNPYTTSVLKE-----VVEDSYKRLIEPAIEREIRNELTEKAEDGAIDVFGK 300
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L + P K + W P + ++D +G+V+ G
Sbjct: 301 NLHQLLMQPPIAGK--------------VVLGWDPAFRTGCKLAVVDPTGKVI-----GT 341
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ Q K ++ L K + + ++ LG S S + I ++++E
Sbjct: 342 TVIYPTAPTTPQKIKASKDLLKKIIPKYHISLISLGNGTASRES-----EQFIVELLKEI 396
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
P V + V +E+ +Y S+++S++ P + A ++ R LQ+PLA +
Sbjct: 397 PEQVQY-------VIVNEAGASVYSASKLASEEFPKFDVGQRSAASIARRLQDPLAELVK 449
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ KL EK G V+ + N+VG+D+N A
Sbjct: 450 IDPKSIGVGQYQHDMNQKKLG---------EKLG---GVVENCVNKVGVDLNTA------ 491
Query: 666 FAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
APL +ISG+ + ++ G +R++ + LG K F GF+R+ R G+
Sbjct: 492 SAPLLSYISGISSAISKNIVAYREEHGKFTSRRELLKVPKLGPKAFEQCAGFMRI-RDGE 550
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQEL 751
+ LD T +HPESY A+ L
Sbjct: 551 --------NPLDGTGVHPESYEAAKGL 569
>gi|218132315|ref|ZP_03461119.1| hypothetical protein BACPEC_00173 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992830|gb|EEC58831.1| Tex-like protein N-terminal domain protein [[Bacteroides]
pectinophilus ATCC 43243]
Length = 808
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 203/493 (41%), Gaps = 82/493 (16%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM-DNAVVSTCPTPDGDSAIDSFHQFAG 328
S + + GA+ + A IS R Y+R I M + +V+ +S + +++F+
Sbjct: 172 VKSVKDAIDGAKDIIAERISDVADYRTYIRDITMKEGTLVTAAKDEKAESVYEMYYEFS- 230
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD---CKEHYLSDGVS 385
+PL + + L I + E+EK L V I+ PED + + E+ + V
Sbjct: 231 ------EPLSRIAGHRVLAINRGEDEKFLTVKIEAPEDRILRYLEKKTLTGENEFTTPVI 284
Query: 386 KSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ 445
A + D+ + P++ +E RS ++ A+ + +GK L + P
Sbjct: 285 TEA----------IADSYSRLIAPAIEREIRSSLTDDAQEGAIKVFGKNLHQLLMQPPIA 334
Query: 446 RKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQ 504
K + W P + ++D +G+V+D + ++
Sbjct: 335 GK--------------VVLGWDPAFRTGCKLAVVDPTGKVLDT----KVIYPTEPHNKVA 376
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
K + +RL+K + V+ +G S S +II +++E D +
Sbjct: 377 EAKAELKRLIK---KYGVSVISVGNGTASRES-----EQIIVDLIKELD-------DSVE 421
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREI 620
V +E+ +Y S++++++ P + AV++ R LQ+PLA + + G G+
Sbjct: 422 YVITNEAGASVYSASKLATEEFPDFDVAQRSAVSIARRLQDPLAELVKIDPKSIGVGQYQ 481
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
L LT G++E D NQVG+D+N A + L++ISG+ A
Sbjct: 482 HDMNQKKLGEALT-----GVVE----DCVNQVGVDLNTA-----SASLLEYISGISKTVA 527
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ + G RK + LG K + GF+R++ LD T +
Sbjct: 528 KNIVDYREKNGRFTNRKQLLKVAKLGPKAYEQCAGFMRIQGGDNP---------LDSTSV 578
Query: 741 HPESYGLAQELAK 753
HPESY A +L K
Sbjct: 579 HPESYDAAAQLLK 591
>gi|418322730|ref|ZP_12934042.1| Tex-like protein N-terminal domain protein [Staphylococcus
pettenkoferi VCU012]
gi|365231052|gb|EHM72115.1| Tex-like protein N-terminal domain protein [Staphylococcus
pettenkoferi VCU012]
Length = 716
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 210/498 (42%), Gaps = 79/498 (15%)
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP--- 312
E+ E A + S + LQGA+ + A ++S P R+ + + V++
Sbjct: 136 ESVETAAEAYLNDEVESVEEALQGAQDIIAEQVSDNPKYRQKILKDTYQHGVITAAKKKK 195
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
D + ++ F+ +P++K + + L + + E+EK+L V I + +
Sbjct: 196 AEDEQGIYEMYYDFS-------EPVKKVANHRILAMNRGEKEKVLNVKIDVDTRGIENFI 248
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+++ +S + + +KD+L ++PS+ +E R ++GRA+ + +G
Sbjct: 249 ---RKNEVSAQTEATPYIVE-----AIKDSLKRLIMPSIEREIRGDLTGRAEEHAIDVFG 300
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGC 492
+ L N + P + K + A R C P TFV G V++
Sbjct: 301 ENLRNLLLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPYGTFV---DKG----VIYPHP 349
Query: 493 LTLRSQNVRDQQSKKNDQERL-LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
+KK + ER+ + F+ H ++ +G S + + I ++++
Sbjct: 350 PV----------NKKKEAERIVIDFIQRHHVDLIAIGNGTASRET-----EQFIAGLIQD 394
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
H DV + V +E+ +Y S ++ ++ P + + AV++GR +Q+PL+ +
Sbjct: 395 HDLDVQY-------VIVNEAGASVYSASEVAREEFPDFQVEERSAVSIGRRIQDPLSELV 447
Query: 612 TL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
+ G G+ LE+ LT V+ NQVG+D+N A +
Sbjct: 448 KIDPKSIGVGQYQHDVNQKELESALTF---------VVETAVNQVGVDVNTASQ-----S 493
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
+Q++SGL P A ++ GAI LG K F ++GFLR+ +
Sbjct: 494 LMQYVSGLTPSIAKNIIAYREEEGAITHHSQIAKVKRLGAKTFEQSIGFLRIVDGEEP-- 551
Query: 728 SSQFIDLLDDTRIHPESY 745
LD+T IHPESY
Sbjct: 552 -------LDNTSIHPESY 562
>gi|406669094|ref|ZP_11076379.1| hypothetical protein HMPREF9707_00282 [Facklamia ignava CCUG 37419]
gi|405584428|gb|EKB58333.1| hypothetical protein HMPREF9707_00282 [Facklamia ignava CCUG 37419]
Length = 725
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 157/703 (22%), Positives = 290/703 (41%), Gaps = 151/703 (21%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
G + I I L+LL + IPFIA YRK++ SL +EV
Sbjct: 19 GQETKIQPKQIQVVLNLLS-EGSTIPFIARYRKDQTGSL------DEVQ----------- 60
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
I ++++++ Q +R EE R I ++ +L D+++
Sbjct: 61 ----------IREIEQRY--------RYQMNLAERREEVQRLIAEQDKLT------DALA 96
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
+ + A T ++++D L+ P YK+ +R TK + + GL +A
Sbjct: 97 QEISQATTLQQLED------LYRP----------YKQTRR-TKATIAREQGLEPLAEWL- 138
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
K G E E + +A + + LQGA + A E+ P
Sbjct: 139 -------------KTGGEGE-----VDAVAEQCLSEKVETIEDALQGAHEILAEEVGNHP 180
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAE 352
R ++R NA++ T + + Q+ + ++P+++ + + L I +AE
Sbjct: 181 QFRDFIRKYMAYNAILMTSVKDEESDPQGVYSQY----YDYQEPVQQIVEHRILAINRAE 236
Query: 353 EEKLLQVTIKLPE-DSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI---LKDALDNFLL 408
+E ++ V I+L E ++N + + Y+ D +L + QRE + ++DA F+
Sbjct: 237 KEDVITVKIELDEVPAINYMI----KRYIMD------ELTDSQRERVEEAIRDAYKRFIF 286
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
P++ +E R+ +S RA + +G + N + P + + + + P
Sbjct: 287 PALERELRNSLSERAGEQAIKVFGDNVQNLLLQPPMKGQ--------------VVMGFDP 332
Query: 469 G-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
+ ++D +G+V+D +++ L+ + R K+ + LLK + D+ ++
Sbjct: 333 AYRTGCKLAIVDPTGKVLDKAIIYPH---LKGSSSR----KEKAADELLKLIQDYNVDII 385
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+G S S + + E+I H++D IV E+ +Y S I+ ++
Sbjct: 386 AIGNGTASRES-EQFVAEVI----------QNHQLDTKYIVIS-EAGASVYSASAIAREE 433
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
P + + AV++ R LQ+PLA + + + ++ + L +E+ + +
Sbjct: 434 FPDYEVEERSAVSIARRLQDPLAELIKIDPKSMGVGQYQHDVNQKDL--NEQLNFVVNIT 491
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGL 705
V N+VG+DIN A Q L+ +SG+ A + G R+ L
Sbjct: 492 V---NKVGVDINTA---SAQL--LEHVSGMTSATAKNTIALRNEIGHFNNRRQIKEIKRL 543
Query: 706 GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
G K + AVGFLR+ LD T IHPESY A
Sbjct: 544 GPKTYEQAVGFLRIIGGDNP---------LDSTGIHPESYDTA 577
>gi|358065599|ref|ZP_09152135.1| hypothetical protein HMPREF9473_04198 [Clostridium hathewayi
WAL-18680]
gi|356696085|gb|EHI57708.1| hypothetical protein HMPREF9473_04198 [Clostridium hathewayi
WAL-18680]
Length = 712
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 116/547 (21%), Positives = 236/547 (43%), Gaps = 89/547 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF--K 266
RPKR T+ + + GL +A + + LQL K EE A + +
Sbjct: 105 RPKRRTRATIAQEKGLAPLA-------DLIALQLC-----------KGPVEEAAKEYIDQ 146
Query: 267 CAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQF 326
S++ + GA+ + A IS + R Y+R + M + + +G+S + ++ +
Sbjct: 147 EKGVASAEEAIAGAKDILAERISDQAEYRTYIRRVTMAEGTIQSSAKEEGESVYEMYYHY 206
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSK 386
E+ L+K + L + + E EK+L V I PE+ + + K+ D
Sbjct: 207 -------EETLKKTAGHRILALNRGEAEKVLTVKILAPEEQIIRYLE--KQVVTRDNPYT 257
Query: 387 SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR 446
S L + +++D+ + P++ +E R+ ++ +A+ + +GK L + P
Sbjct: 258 SPILRD-----VVEDSYKRLIAPAIEREIRNDLTEKAEDGAIKVFGKNLEQLLMQPPIVG 312
Query: 447 KDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS 505
+ + W P + ++D++G+V+D + QN + +++
Sbjct: 313 Q--------------VVLGWDPAFRTGCKLAVVDATGKVLDTVV--IYPTAPQN-KVEEA 355
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
K ++ + K+ H+ ++ N + + + I + K + EH +
Sbjct: 356 KATLKKLIKKY------HITLISVGNGTASRESEMIIVDLLKEIPEH----------VQY 399
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
V +E+ +Y S++++++ P + A ++ R LQ+PL+ + + + ++
Sbjct: 400 VIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLSELVKIDPKSIGVGQYQH 459
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFISGLGPRKAASLQ 684
+ L+ + G++E D N+VG+D+N A APL +++SG+ A ++
Sbjct: 460 DMNQKHLS-EALQGVVE----DCVNKVGVDLNTA------SAPLLEYVSGINKALAKNIV 508
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
GA +RK + LG K + GF+R+ + G+ + LD T +HPES
Sbjct: 509 AYREENGAFASRKQLLKVAKLGPKAYEQCAGFMRI-QGGK--------NPLDGTSVHPES 559
Query: 745 YGLAQEL 751
Y A L
Sbjct: 560 YEAAGTL 566
>gi|336409400|ref|ZP_08589886.1| hypothetical protein HMPREF1018_01902 [Bacteroides sp. 2_1_56FAA]
gi|335946782|gb|EGN08580.1| hypothetical protein HMPREF1018_01902 [Bacteroides sp. 2_1_56FAA]
Length = 707
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 130/556 (23%), Positives = 226/556 (40%), Gaps = 102/556 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQ-LGLQLSLEKMGDELEDPKETPEEMASNFKC 267
+PKR T+ + + GL +A E LG ++ GD
Sbjct: 106 KPKRKTRAEAARQKGLEPLALLLMMQRENNLGSRIPAFVKGD------------------ 147
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFA 327
++ L+GAR + A ++S + R VR++F AV+S D + +
Sbjct: 148 --VKDAEDALKGARDIIAEQVSEDERARNAVRNLFARQAVISAKVVKGKDEEAAKYRDY- 204
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ PL++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 205 ---FDFSSPLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDD------ECLER-LDRQFVRS 253
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
Q ++DA L PS+ E SL +A + + + L + P +K
Sbjct: 254 NNECGRQVAEAVQDAYRRLLKPSIETEFASLSKEQADDEAIRVFAENLRQLLLAPPLGQK 313
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ--- 503
RV+ PG + V LD+ G +V ++N+
Sbjct: 314 ------------RVMGI--DPGFRTGCKVVCLDAQGNLV----------HNENIYPHPPV 349
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDEL 563
K +L K + ++ + +G N + + ++ F ++ R+V
Sbjct: 350 DKKTEAASKLRKMIEAYKIEAIAIG--NGTASRETEN-----FVTHQQFDRNV------- 395
Query: 564 SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGRE 619
+ E +Y S+ + D+ P V+ AV++ R L +PLA + + G G+
Sbjct: 396 QVFVVSEQGASIYSASKTARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVGQY 455
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRK 679
L+ L +Q + + NQVG+++N A L +ISGLGP+
Sbjct: 456 QHDVDQTKLKKSL---------DQTVENCVNQVGVNLNTASSH-----LLTYISGLGPQL 501
Query: 680 AASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
A ++ GA +RK+ + +G K F GFLR+ G+ + LD+T
Sbjct: 502 AQNIVAYRAANGAFASRKELMKVPRMGAKAFEQCAGFLRI-AGGE--------NPLDNTA 552
Query: 740 IHPESYGLAQELAKEV 755
+HPESYG+ Q++AK++
Sbjct: 553 VHPESYGIVQQMAKDL 568
>gi|253580013|ref|ZP_04857280.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848532|gb|EES76495.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 719
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 120/549 (21%), Positives = 235/549 (42%), Gaps = 89/549 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A + L +M D+ P E + +
Sbjct: 105 RPKRRTRATIAKEKGLEPLAD------------IILLQMTDK---PVEEEARAYVSEEKG 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN-AVVSTCPTPDGDSAIDSFHQFA 327
+ N ++A L GA+ + A IS E R Y+R++ N ++ ST + S + +++F
Sbjct: 150 VKNVAEA-LNGAKDIIAERISDEADYRIYIRNLTTKNGSISSTAKNAETQSVYEMYYEF- 207
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
E+P+RK + L + + E+EK + V + PE+ + + + K D + +
Sbjct: 208 ------EEPVRKLAGHRILALNRGEKEKFITVKVNAPEEDILRYLN--KRVIKKDNPNTT 259
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
L + +++D+ + P++ +E RS ++ +A+ + +GK L + P K
Sbjct: 260 PIL-----KAVVEDSYKRLIGPAIEREIRSDLTDKAEDGAIHVFGKNLEQLLMQPPIAGK 314
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSK 506
+ W P + ++D++G+V+D T+ + K
Sbjct: 315 --------------VVLGWDPAFRTGCKLAVVDATGKVLDT------TVVYPTAPTTEKK 354
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
+ ++ M++ ++ +C + ++I M++E P ++ V
Sbjct: 355 IRAAKDTVEGMIEKYGVSLISVGNGTACRESE----QVIVDMLKEIPEK------KVQYV 404
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILS 622
+E+ +Y S++++++ P + A ++ R +Q+PLA + + G G+
Sbjct: 405 ITNEAGASVYSASKLATEEFPNFDVGQRSAASIARRVQDPLAELVKIDPKSIGVGQYQHD 464
Query: 623 WKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAAS 682
L+ L+ G++E D N+VG+D+N A + L++ISG+ A +
Sbjct: 465 MNQKKLDEALS-----GVVE----DSVNKVGVDLNTA-----SASLLEYISGISKAIAKN 510
Query: 683 LQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
+ G RK+ + LG K F GF+R+ SG + LD T +HP
Sbjct: 511 IVAYREENGQFTDRKELLKVAKLGPKAFEQCAGFMRI--SGGK-------NPLDATSVHP 561
Query: 743 ESYGLAQEL 751
ESY A L
Sbjct: 562 ESYEAASAL 570
>gi|120602043|ref|YP_966443.1| RNA-binding S1 domain-containing protein [Desulfovibrio vulgaris
DP4]
gi|120562272|gb|ABM28016.1| RNA binding S1 domain protein [Desulfovibrio vulgaris DP4]
Length = 723
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 156/682 (22%), Positives = 263/682 (38%), Gaps = 144/682 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPF+A YRKE L +EV L A+ D ++ L KR
Sbjct: 38 IPFVARYRKEATGGL------DEV------------------ALTALRDGCERLRTLDKR 73
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ A+ + +R +QL ++K+L AA T ++D+ L F
Sbjct: 74 RDAIITSMTER-----------------EQLTPDLAKALHAATTLTALEDIYLPF----- 111
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A + EQ G Q + +++ K
Sbjct: 112 ------------RPKRVTRAAKARERGLAPLAERL---LEQRGAQAG-QLAAPFVDEAKG 155
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV-STCPTPD 315
P+ +A+ L GAR + A +S + R +R IF+ A + S
Sbjct: 156 VPDTVAA-------------LAGARDIIAETVSEDRATRATLRDIFVRRATLRSKVARGK 202
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+ A F + P + L + + E E+LL V ++ P+D L
Sbjct: 203 EEQAATYRDHFDRSEHAAAAPAHRL-----LAMFRGEREELLDVRVR-PDDDLA--VGAL 254
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+L G + SA + L DA + L PS+ E R+ + RA++ + + L
Sbjct: 255 HRRWLK-GRASSAGTDAAEVATALTDAWNRLLAPSLENEFRTALRERAEAEAIAVFAANL 313
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ P + R LA PG + V LD+ G ++ LT
Sbjct: 314 RELLLAPPMGPR------------RTLA--LDPGWRTGAKLVCLDAQGALLHHEVIHPLT 359
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
+ R + L + H V +G + T+ ++ E K P
Sbjct: 360 GGDRATRAAAT-------LRELCSRHGIEAVAVG----NGTAGRE--TEAFVKSAGLPP- 405
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
+++ DE +Y S ++ + P V+ AV++GR L +PLA + +
Sbjct: 406 -------HVTVALVDERGASVYSASEVARAEFPDHDVTVRGAVSIGRRLMDPLAELVKV- 457
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP--LQFI 672
+ S + ++ + + +E+V+ N VG+D+N A +P L ++
Sbjct: 458 ----DPRSLGVGQYQHDVDQNALRRALEEVVASCVNAVGVDVNTA-------SPELLAYV 506
Query: 673 SGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
SG+GP A + G TR++ + LG K F A GFLRV +
Sbjct: 507 SGIGPALAKGIVAWRAANGPFRTRRELLKVPRLGPKAFEQAAGFLRVHGGPEP------- 559
Query: 733 DLLDDTRIHPESYGLAQELAKE 754
LD + +HPESY L + +A++
Sbjct: 560 --LDASAVHPESYALVRRMAED 579
>gi|284035601|ref|YP_003385531.1| Tex-like protein [Spirosoma linguale DSM 74]
gi|283814894|gb|ADB36732.1| Tex-like protein protein-like protein [Spirosoma linguale DSM 74]
Length = 713
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 169/786 (21%), Positives = 305/786 (38%), Gaps = 171/786 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE S L++ ++ + + K+L DLDK+ R
Sbjct: 33 VPFIARYRKELTASNGNPLDEVQIGQIKD---------TYQKIL----DLDKR------R 73
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ ++S DE +L + K LE+ ++ +++D+ L F
Sbjct: 74 ETVIKSI-------------DE-----QGKLTPDLQKKLESTDSMTDLEDLYLPF----- 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
R KR T+ + + GL +A+ L +
Sbjct: 111 ------------RQKRKTRATIAIERGLEPLANVI-------------------LAQREA 139
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+ +++ + ++ LQGAR + A IS R+ +R++F A+V
Sbjct: 140 SLDQIVQRYLSDAVATAADALQGARDILAERISENVDARQRIRNLFEREAIVR------- 192
Query: 317 DSAIDSFHQFAGVKWLR----EKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
S + + GVK+ +PLR+ + L +++ E E +L V I E++
Sbjct: 193 -SVVKKGKEAEGVKYRDYFDFAEPLRRVPSHRLLALRRGEAEGVLSVGIGPDEEAA---I 248
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ +++D A DQ L ++D L PS+ E + +A + + +
Sbjct: 249 ERLERQFVADRSGTPA--CKDQLALAIRDGYKRLLKPSLETEFANTSKEKADAEAIRIFA 306
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTG 491
L + P +K RVLA PG + V LD+ G ++L
Sbjct: 307 DNLRQLLLSAPLGQK------------RVLAI--DPGFRTGCKTVCLDAQG---NLLADT 349
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
L L + + QQ+ + Q+ + ++ +D A+ + + + E I + +
Sbjct: 350 VLYLSHSDAQRQQAVQTVQKLVSQYKID---------AIAVGNGTAGRETEEFIQSLKLD 400
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
P I E +Y S ++ ++ P V+ AV++GR L +PLA +
Sbjct: 401 KP-----------IFIVSEQGASIYSASEVAREEFPDHDVTVRGAVSIGRRLMDPLAELV 449
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+ + S + ++ + + ++ V+ NQVG+ +N A L++
Sbjct: 450 KI-----DPKSIGVGQYQHDVDQTDLKTSLDAVVESCVNQVGVSLNTA-----SAYLLRY 499
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+SGLGP+ A ++ GA +R+ LG K F GFLR+ +
Sbjct: 500 VSGLGPQLAGNIVAYRAANGAFSSREQLKKVPRLGPKAFEQCAGFLRIEGAKNP------ 553
Query: 732 IDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
LD++ +HPE Y + + +A EV +R +E + RPDL + ++
Sbjct: 554 ---LDNSAVHPERYSVVERMAAEVGSR----------------VEELIMRPDLRQQIKVE 594
Query: 792 RHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQ 851
+++ E TL I EL +D R Q D T D L EG V+
Sbjct: 595 KYVTN---EVGLPTLRDILSELAKPGRDPREQLSVFDYDTRV-----RTVDDLHEGMVLP 646
Query: 852 ATVRRV 857
V +
Sbjct: 647 GVVTNI 652
>gi|418875927|ref|ZP_13430177.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|377768461|gb|EHT92242.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC93]
Length = 716
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 144/672 (21%), Positives = 272/672 (40%), Gaps = 113/672 (16%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ + ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFIA--RQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ ++ + + ++ +G SC + + + ++++H V
Sbjct: 351 VSKKEAAEKD----FVQMVKAYDVQLIAIGNGTASCET-----EQFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQELAKEV--YNRDIEGD--------LNDDEDALEMAIEHVRDRPDL 784
LD+T IHPESY + +L ++ D+ D LN DE A+E+ +
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLNSLNMDELAIELQV--------- 602
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L+ IK K N+ D R++++ P + I + L
Sbjct: 603 -GVPTLEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDL 640
Query: 845 AEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
EG + TVR V A + G++ S + + + D + GDI+ I S
Sbjct: 641 QEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYS 699
Query: 905 IQKNRYQVFLVC 916
I KN+ +V L
Sbjct: 700 IDKNKDKVSLTM 711
>gi|167759788|ref|ZP_02431915.1| hypothetical protein CLOSCI_02151 [Clostridium scindens ATCC 35704]
gi|167662407|gb|EDS06537.1| Tex-like protein N-terminal domain protein [Clostridium scindens
ATCC 35704]
Length = 717
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 192/857 (22%), Positives = 342/857 (39%), Gaps = 192/857 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE +L +++ R H+ L + +L+ +K+
Sbjct: 31 IPFIARYRKEATGTL------------DDEQLRR-----LHERLTYLRNLE------EKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L S EE ++ +E R QQ+ AAET V+D L+ P
Sbjct: 68 EQVLSSI------EEQGKLTEELR----QQIL--------AAETLVVVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL E L +SL+K +ED
Sbjct: 104 -----------YRPKRRTRATIAKEKGL-----------EPLAAVISLQKTERPVED--- 138
Query: 257 TPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPT 313
+A F ++ + V+ GA+ + A IS E R ++R I M V+S
Sbjct: 139 ----LAKEFINPEKEVHTVEEVIAGAKDIIAENISDEADYRIWIRKITMQKGRVISAAKN 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+S + ++ F E+P+ + + L + + E+EK L V I+ PE+ + +
Sbjct: 195 EKAESVYEMYYDF-------EEPVGRLAGHRILALNRGEKEKFLTVKIEAPEEDIIR--- 244
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLM 429
YL K+ N ILKD ++ + P++ +E RS ++ RA+ +
Sbjct: 245 -----YLQ---KKTIHGENPYTTPILKDVTEDSYKRLIAPAIEREIRSELTERAEDGAIE 296
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--D 486
+ K L + P VL W P + ++D +G+V+
Sbjct: 297 VFKKNLEQLLMQPPI------------VGQTVLG--WDPAFRTGCKLAVVDPTGKVIGTT 342
Query: 487 VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
V++ T + + Q + + + L +V S + +++ +
Sbjct: 343 VIYPTAPT----------TPQKIQASKDLLKKIIKKYNITLISVGNGTASRESEMF--LV 390
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
++++E P+ V + V +E+ +Y S+++S++ P + A ++ R LQ+P
Sbjct: 391 ELLKEIPQKVQY-------VIVNEAGASVYSASKLASEEFPKFDVGQRSATSIARRLQDP 443
Query: 607 LAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHR 662
LA + + G G+ L L+ G++E D N+VG+D+N A
Sbjct: 444 LAELVKIDPKSIGVGQYQHDMNQKKLSEALS-----GVVE----DCVNKVGVDLNTA--- 491
Query: 663 EWQFAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRR 721
APL +ISG+ A ++ G +R+ + LG K + GF+R++
Sbjct: 492 ---SAPLLAYISGISAAIAKNIVAYREENGKFTSRRQLLKVAKLGPKAYEQCAGFMRIQG 548
Query: 722 SGQAASSSQFIDLLDDTRIHPESYGLAQELAKE--VYNRDIEGDLNDDEDALEMAIEHVR 779
LD T +HPESY A+ L K+ DI+G L + I++ +
Sbjct: 549 GDNP---------LDGTSVHPESYEAAERLLKKQGYKPEDIDG---GKLTGLSLTIKNYK 596
Query: 780 DRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGE 839
+ L E TL I +EL +D R++ +P + E
Sbjct: 597 SLAEEL--------------EIGEITLMDIVKELEKPARDPRDEMPKPILRTDVL----E 638
Query: 840 TEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILT 899
+D L EG +++ TVR V + G++ + +D + + GDI+
Sbjct: 639 MKD-LTEGMILKGTVRNVIDFGVFVDIGVHQDGLVHISEITDKKFIKHPLEVVSVGDIVD 697
Query: 900 CKIKSI--QKNRYQVFL 914
K+ S+ +K R Q+ +
Sbjct: 698 VKVLSVDLKKKRIQLTM 714
>gi|218247633|ref|YP_002373004.1| RNA-binding S1 domain-containing protein [Cyanothece sp. PCC 8801]
gi|257061032|ref|YP_003138920.1| RNA binding S1 domain-containing protein [Cyanothece sp. PCC 8802]
gi|218168111|gb|ACK66848.1| RNA binding S1 domain protein [Cyanothece sp. PCC 8801]
gi|256591198|gb|ACV02085.1| RNA binding S1 domain protein [Cyanothece sp. PCC 8802]
Length = 719
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 162/730 (22%), Positives = 282/730 (38%), Gaps = 201/730 (27%)
Query: 57 SISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSL----LKDLEQNEVNNDNNDDFERTP 112
S++ + LDLL L+ IPFIA YRKE+ SL L+D+
Sbjct: 13 SLNPQSVQNALDLL-LEGATIPFIARYRKEKTGSLDEVQLRDI----------------- 54
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
W + + DL+K+ +++ L++ ++ +L + +
Sbjct: 55 ---WENYNY-LTDLEKR------KQTILEA------------------ISAQNKLTEELK 86
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVA---- 228
+ +E+ + E++D+ L + +PKR T+ + + GL A
Sbjct: 87 QKIESCLQKTELEDLYLPY-----------------KPKRRTRATVAKEKGLQSFADWIK 129
Query: 229 SKFGYSSEQLGLQ------LSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
S +++ L L+ LS+EK +ED L GA
Sbjct: 130 SLNNSNAKPLALEEEAKRYLSVEKGITTVED----------------------ALNGASD 167
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPT---PDGDSAIDSFHQFAGVKWLREKPLRK 339
+ A E+S + +R Y+R M + ++ P+G + + + F G ++K
Sbjct: 168 ILAEEVSEKAELRAYLRDYLMKEGIFTSSIKSEYPEGSTKYEMYRTFQG-------SVKK 220
Query: 340 FEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELIL 399
L + + E E LL + + E + FS + + Q + +L
Sbjct: 221 IAPHNILALFRGESEGLLSINLDFDESVI---FSYLASQEIKTKNTAIKQFYQG----ML 273
Query: 400 KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAP 459
KDA + + PS+V+E RS K+W +E K K ++P P
Sbjct: 274 KDAFNRLIKPSLVREIRS----DRKNWADIESIKTF-------EINLKQLLLSPPAGMKP 322
Query: 460 RVLACCWGPG-KPETTFVMLDSSGEVVD--VLF--TGCLTLRSQNVRDQQSKKNDQERLL 514
PG + +L +G+ ++ +F TG + K+ + E L
Sbjct: 323 ---TLAIDPGFRTGCKVAILSETGQFLEYQAIFPHTG------------EGKRKEAEITL 367
Query: 515 KFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLP 573
K ++ + ++ +G N + + D I K + P V IV +ES
Sbjct: 368 KNLLKKYNIELIAIG--NGTASRETDQFITEILKTLNNKPIKV--------IV--NESGA 415
Query: 574 RLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR-------EILS 622
+Y S ++ ++ P V+ A+++GR LQ+PLA + + G G+ ++L
Sbjct: 416 SIYSASDLAREEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLK 475
Query: 623 WKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAAS 682
KL E+ + N VG+D+N A A L F+SG+ P A +
Sbjct: 476 QKL----------------EETVESCVNYVGVDLNTASK-----ALLVFVSGITPTIANN 514
Query: 683 LQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
+ G RK+ + LG K F A GFLR+R LD+T +HP
Sbjct: 515 IVEYRNNNGVFKNRKELLKVTKLGAKAFEQAAGFLRIRNGENP---------LDNTAVHP 565
Query: 743 ESYGLAQELA 752
ESY + Q +A
Sbjct: 566 ESYPVVQSIA 575
>gi|381205648|ref|ZP_09912719.1| S1 RNA-binding protein [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 764
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 138/634 (21%), Positives = 269/634 (42%), Gaps = 106/634 (16%)
Query: 144 YKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVD 203
Y+ E E RR R+ ++L + + K ++ +T++E++D L+ P
Sbjct: 66 YEYLKELEDRRETILNRIREQEKLTEELEKKIDEVKTKQELED------LYIP------- 112
Query: 204 EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMAS 263
YK PKR T+ + GL +A QL L + GD + E A
Sbjct: 113 ---YK-PKRRTRAMIAREKGLEPLA------------QLVLVEQGDRNQINAWLDEFQAG 156
Query: 264 NFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPT--PDGDSAI 320
++ + + +G R + A +++ + R +R + F VS D S
Sbjct: 157 ---LSLPLPTDEIWRGVRDICAEKVAEDAQTRARIRQLTFQQGKFVSEVKPEFQDTTSKF 213
Query: 321 DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYL 380
+ +++F+ + + K + ++L I++ E+E++LQV I++ E + +
Sbjct: 214 EMYYEFS-------ENISKIQPHRYLAIRRGEKEEILQVRIQIHEGLTKSILREI----- 261
Query: 381 SDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVS 440
V+K+ + + + L D+ D L PS+ E R + +A +K S
Sbjct: 262 --WVAKANVDFQQELHVALSDSYDRLLAPSIETEIRQELKQQA-------------DKSS 306
Query: 441 VGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQN 499
+G + + + RV+ PG + T +V++D +G + + G +
Sbjct: 307 IGLFSKNLRQLLMQPPGGARVV-IGLDPGFRTGTKWVVIDHTGRLHE---NGVIY----P 358
Query: 500 VRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHE 559
V Q+ + + LL + +Q +V +G S ++ + + +++ V H
Sbjct: 359 VEPQRQVEASRRTLLGLIERYQAEIVAVGNGTGS-----REVSQFLRGFIKDLQLKVRH- 412
Query: 560 MDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGRE 619
+ +ES +Y S I+ + P V+ AV++ R Q+PLA + + P
Sbjct: 413 ------LVVNESGASVYSASEIARQEFPNLDLTVRGAVSIARRYQDPLAELVKI-DPK-- 463
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRK 679
S + ++ + E +++ + NQVG+++N A A L ++SG+
Sbjct: 464 --SIGVGQYQHDVNQKELKQSLDRTVESCVNQVGVELNQA-----SAALLSYVSGVTKSL 516
Query: 680 AASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
AA + G +R++ + G GKK F A GFLR+R + LD +
Sbjct: 517 AARIVSHRDENGPFRSRQELMQVTGFGKKAFEQAAGFLRIRNAEHP---------LDQSA 567
Query: 740 IHPESYGLAQELAKEVYNRD-IEGDLNDDEDALE 772
+HPE Y + +++A ++D + DL ++DAL+
Sbjct: 568 VHPERYSIVEQMAA---SQDLLVADLIGNQDALQ 598
>gi|291517976|emb|CBK73197.1| Transcriptional accessory protein [Butyrivibrio fibrisolvens 16/4]
Length = 719
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 138/595 (23%), Positives = 252/595 (42%), Gaps = 117/595 (19%)
Query: 167 LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWE 226
L + + K++ AET+ VDD L+ P RPKR T+ + + GL
Sbjct: 80 LTEELKKAILEAETQVAVDD------LYRP-----------YRPKRRTRATIAKEKGLEP 122
Query: 227 VASKFGYSSEQLGLQL---SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHM 283
+A+ + LQ+ SLE+ +P++ N+ + + GA +
Sbjct: 123 LAN-------IIILQMTDKSLEEEAKAFINPEKE------------VNTPEEAIAGACDI 163
Query: 284 AAVEISCEPCVRKYVR-SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
A IS + R ++R F +VS P+ +S ++++ + ++ + K
Sbjct: 164 IAESISDDADYRTWIREKTFKFGRIVSKAKDPEAESVYENYYDY-------DEAIAKLPG 216
Query: 343 AQWLLIQKAEEEKLLQVTIKLP-EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKD 401
+ L + + E+EK+L+V+I+ P ED LN L K+ D V+ + L N ++D
Sbjct: 217 HRILALNRGEKEKILKVSIEAPVEDILNYLE---KKIISRDNVNTNQALIN-----TIED 268
Query: 402 ALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRV 461
A + PS+ E R+ ++ A+ + +GK L + P A V
Sbjct: 269 AYSRLIAPSIENEIRNNLTEMAEDGAIKVFGKNLTQLLMQPPI------------AGRNV 316
Query: 462 LACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDH 520
L W P + ++D++G+V+D T QN + +++KK + + K+ +
Sbjct: 317 LG--WDPAFRTGCKIAVVDATGKVLDT--TVVYPTAPQN-KVEETKKVIKSLIKKYNV-- 369
Query: 521 QPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSR 580
++ LG S S +II M++E P V + + +E+ +Y S+
Sbjct: 370 --SLISLGNGTASRES-----EQIIVDMLKEIPEKVEY-------IIVNEAGASVYSASK 415
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDE 636
+++++ P + A ++ R LQ+PLA + + G G+ L+ L
Sbjct: 416 LATEEFPNFDVGQRSATSMARRLQDPLAELVKIDPKSVGVGQYQHDMNQKKLDETLA--- 472
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTR 696
G++E + N VG+D+N A + L+++SG+ A ++ G +R
Sbjct: 473 --GVVETCV----NAVGVDLNTA-----SASLLEYVSGINKTLAKNIVEYRETNGRFNSR 521
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
+ LG K F GF+R+ LD T +HPESY A+ L
Sbjct: 522 AELKKVPKLGPKAFEQCAGFMRITGGKNP---------LDATAVHPESYDAAKAL 567
>gi|428770269|ref|YP_007162059.1| Tex-like protein [Cyanobacterium aponinum PCC 10605]
gi|428684548|gb|AFZ54015.1| Tex-like protein [Cyanobacterium aponinum PCC 10605]
Length = 723
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 158/710 (22%), Positives = 285/710 (40%), Gaps = 140/710 (19%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+LS++ +++ L+LL+ + IPFIA YRKE SL NE+
Sbjct: 9 ASELSLNLENVESALELLN-EGATIPFIARYRKERTGSL------NEIQ----------- 50
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
+ D+ +++ LQ E E RR + +A +L + +
Sbjct: 51 ----------LRDIQERFNYLQ--------------ELEQRRQFILDAIASQNKLSEPLK 86
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
+ A + E++D+ L + +PK+ T+ + + GL +A
Sbjct: 87 AQITACLQKNELEDLYLPY-----------------KPKKRTRATIAREKGLTSLAEWVK 129
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
++ Q + K + + +E A + NSS+ L GAR + A EI+ +
Sbjct: 130 NQNQSEDGQKAKGKRQEVISLSQE-----AEKYVSDSVNSSEEALSGARDILAEEIAEKA 184
Query: 293 CVRKYVRSIFMDNAV-VSTCPT--PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+R Y+R ++N VS P+G + + + F L K L +
Sbjct: 185 ELRAYLREFILNNGTFVSQIKKDYPEGSTKYEMYRSFTC-------KLTKIAPHNILALY 237
Query: 350 KAEEEKLLQVTIKLPED-SLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
+ E EK+L + + E+ ++N L S + +K+ ++ +E I KD+ + L
Sbjct: 238 RGEGEKILSLDVDFEEERAINYLESKIIK-------TKNPEIKQFYQETI-KDSFNRLLK 289
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
P+++++ RS M K W E K EA R L
Sbjct: 290 PALLRDVRSEM----KIWADTESIKTF--------------------EANLRELLLSPPA 325
Query: 469 G-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNV--RDQQSKKNDQERLLKFMMDHQPHVV 525
G KP +G V +L L Q + + K+N + LK ++ + H+
Sbjct: 326 GMKPTMGIDPGFRTGCKVAILSETGQFLEYQAIFPHNGSEKRNLAKNSLKKLI-QKYHIA 384
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
++ N + + DD + K ++ P V +ES +Y S ++ +
Sbjct: 385 LIAIGNGTASRETDDFVTEVLKEIDTKPIKV----------MVNESGASIYSASDVAISE 434
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
P V+ A+++GR LQ+PLA + + I ++ + L +E+ +
Sbjct: 435 FPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGIGQYQHDVDQKLLKQK-----LEETV 489
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGL 705
N VG+D+N A +E L F+SG+ A ++ + G RK+ + L
Sbjct: 490 ESCVNYVGVDLNTA-SKEL----LVFVSGINSTIANNIVQYRNEKGVFKNRKELLKVKKL 544
Query: 706 GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
G K F A GFLR+R LD+T +HPESY + ++++ ++
Sbjct: 545 GSKTFELAGGFLRIRDGDNP---------LDNTAVHPESYPIVKKISSDL 585
>gi|365838916|ref|ZP_09380172.1| Tex-like protein [Anaeroglobus geminatus F0357]
gi|364566315|gb|EHM44012.1| Tex-like protein [Anaeroglobus geminatus F0357]
Length = 725
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 146/680 (21%), Positives = 264/680 (38%), Gaps = 143/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE LL +++ + D+ER + + V A+ +L W
Sbjct: 34 VPFIARYRKE-ATGLLNEVQLRSIQE--RFDYERALSARKETVEQAVKELGL-WT----- 84
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ ++ +LE A +EV+D+ L +
Sbjct: 85 --------------------------------EELAVALEKAAQIQEVEDIYLPY----- 107
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+PK+ T+ S +AGL +A F + + G E
Sbjct: 108 ------------KPKKRTRASMAREAGLEPLADLFT----------AQDAAGPE------ 139
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
PEE A + +++ ++GA ++ A +S RK +R NAV++ D
Sbjct: 140 -PEEAARPYLSGTVPTAEDAIRGAAYIIAERLSELTAYRKILRERLWKNAVLACSLAVDE 198
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ A F K E+ + + L I + E +K+L+V++ D+ L +
Sbjct: 199 EEA----GPFLTYKEFSER-IAAIPSHRILAITRGEGQKILKVSLTADNDAYIGLLAGM- 252
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
+ G S Q+ D+ + P M +E RS + +A+ + + + L
Sbjct: 253 ---IIRGPSPYGQILMAT----AADSYKRLIFPQMDREIRSDLFSKAEKQAISVFSENLR 305
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
+ + P+ P+ + PG + ++D++G V+D G L
Sbjct: 306 SLLMQPPF--------------PKQIILGLDPGYRTGCKAAVIDATGTVLDY---GTYHL 348
Query: 496 R-SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
S RD+ +K L + H ++ +G S + + + ++EE
Sbjct: 349 TGSAKQRDEAAKS-----LANIIKKHGVTLISIGNGTASY-----ETEQFVSTLIEEKKL 398
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
+ + +ES +Y S ++ ++LP V+ AV++ R +Q+PLA +
Sbjct: 399 TCRY-------IIANESGASVYSASDLAREELPDLDVTVRGAVSIARRIQDPLAEAVKI- 450
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
+ S + ++ + ++ V+ V N+VG+D+N A A LQ ISG
Sbjct: 451 ----DPKSIGVGQYQHDVNQKTLSSALDSVVESVVNRVGVDLNTA-----SPALLQHISG 501
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L A ++ G +RK+ LG + GFLR++ D
Sbjct: 502 LTASTAGNIVAYRNANGPFRSRKELRHVSRLGPATYTQCAGFLRIKGG---------TDP 552
Query: 735 LDDTRIHPESYGLAQELAKE 754
LDDT +HPESY LA+++ E
Sbjct: 553 LDDTSVHPESYDLAKKIISE 572
>gi|407478429|ref|YP_006792306.1| RNA binding S1 domain-containing protein [Exiguobacterium
antarcticum B7]
gi|407062508|gb|AFS71698.1| RNA binding S1 domain protein [Exiguobacterium antarcticum B7]
Length = 706
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 154/689 (22%), Positives = 272/689 (39%), Gaps = 164/689 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE+ L D+ E L HK + + KR
Sbjct: 29 IPFIARYRKEQTGEL--------------DEVEIKAILDRHKSITQLET---------KR 65
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L ++ EE++ + + +SL AA T ++++D+ L F
Sbjct: 66 EDVL-----RKIEEQA-------------VMTPELKQSLNAATTLQQIEDLYLPF----- 102
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR TK +AGL A D L PK
Sbjct: 103 ------------RPKRRTKAEIAREAGLAPFA--------------------DFLRSPKS 130
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+E + F A +AV GA+ + A E + VR ++R A + T D
Sbjct: 131 YDDEQFNQF-IAAHEEGEAV-AGAQAIIAEEWGEQASVRDHIRKTAYRFADIVTKLKKD- 187
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
A+D FA E+ +R+ + L I +AE K++ V + L +
Sbjct: 188 --AVDEKRVFAQYYEYNER-IRQIVPHRILAINRAESLKIVSVKVVLDD----------- 233
Query: 377 EHYLSDGVSKSAQLWNDQRELI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+H L + ++L +++R L+ ++ + P++ +E R+ ++ +A++ + +GK
Sbjct: 234 QHVLPYLLRPFSRLADEKRRLVEEAVQTGYKKSVFPAIERELRNELTDKAENQAIEVFGK 293
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCL 493
L P + K + + A R C W ++D +GEV +V G +
Sbjct: 294 NLRQLYMQPPMKGK---VMLGLDPAYRT-GCKWA---------VIDPTGEVKEV---GVV 337
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
+ + Q++++ L K + + ++ +G S + + ++EH
Sbjct: 338 YVTMSEQKAQEARQV----LTKLVKRYGVELIAIGNGTAS-----RETESFVANWIKEH- 387
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
D+++ DE+ +Y S I+ + P + + A+++ R LQ+PLA + +
Sbjct: 388 -------DDIAFTIVDEAGASIYSASEIARTEFPDLQVEQRSAISIARRLQDPLAELVKV 440
Query: 614 ----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
G G+ ++ KL +F V+ V NQVG+D+N A
Sbjct: 441 DPQSVGVGQYQHDVTQTKLKETLDF------------VVETVVNQVGVDVNTASE----- 483
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
+ L +++G+ A + GA +RK+ + LG K + A GFLR+
Sbjct: 484 SLLGYVAGITKATAKKIVERRSELGAFESRKELLKVPRLGAKAYEQAAGFLRIPEGSHP- 542
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LD T IHPE Y + L K++
Sbjct: 543 --------LDRTPIHPEQYKTVERLFKQL 563
>gi|167756510|ref|ZP_02428637.1| hypothetical protein CLORAM_02047 [Clostridium ramosum DSM 1402]
gi|365833123|ref|ZP_09374645.1| hypothetical protein HMPREF1021_03409 [Coprobacillus sp. 3_3_56FAA]
gi|374627532|ref|ZP_09699935.1| hypothetical protein HMPREF0978_03255 [Coprobacillus sp.
8_2_54BFAA]
gi|167702685|gb|EDS17264.1| Tex-like protein N-terminal domain protein [Clostridium ramosum DSM
1402]
gi|365258977|gb|EHM88974.1| hypothetical protein HMPREF1021_03409 [Coprobacillus sp. 3_3_56FAA]
gi|373912980|gb|EHQ44822.1| hypothetical protein HMPREF0978_03255 [Coprobacillus sp.
8_2_54BFAA]
Length = 713
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 164/710 (23%), Positives = 289/710 (40%), Gaps = 162/710 (22%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L I++ I L LL Q +PFIA YRKE L +D
Sbjct: 12 ELEITKKQINAVLSLLE-QGNTVPFIARYRKEATGGLDED-------------------- 50
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
I ++DK + Q + S L KR E+ R I E + L QL I K+
Sbjct: 51 -------QIRNIDKYY---QYQVSLL-----KRKEDVIRLI--EEKGMLTDQLRADILKA 93
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
+ E E +L+ P E KR TK + GL E SK+ S
Sbjct: 94 TKLNEVE----------DLYRPYKE-----------KRKTKATEAKAKGL-EPLSKWILS 131
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
+ L+ E+ L D ET EE +QGA + A IS +
Sbjct: 132 LPRGELK---EEAKKYLNDKVETVEE---------------AIQGALDIIAEVISDDIKY 173
Query: 295 RKYVRSIFMDNAVVSTC---PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKA 351
RK+V+ I + + T PD + + ++ + + + + + L I +A
Sbjct: 174 RKFVKDIIYKSGTIETKVKKKNPDENKVYEMYYDY-------HERVNRIVSHRILAINRA 226
Query: 352 EEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK---DALDNFLL 408
E EK++ V I L ++ L Y++ GV+++ + E +LK D+L+ LL
Sbjct: 227 ENEKVITVNIVLDKEFLI--------QYINRGVTRNRN--SSVNEYLLKAVEDSLNRLLL 276
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
PS+ +E R+ ++ +A L + L + P + K + P
Sbjct: 277 PSIEREVRNELTEKASEQALKVFSINLEKLLMQAPLKDK--------------MVLGLDP 322
Query: 469 G-KPETTFVMLDSSGEV--VDVLFTGCLTLRSQNVRDQQSKKNDQER--LLKFMMDHQPH 523
+ ++D +G+V +D +F +T+ N D+E+ LL + ++
Sbjct: 323 AYRTGCKLAVVDQTGKVLKIDKVF---ITIPKDNY--------DKEKRILLNLIKKYKIE 371
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
++ +G S S I ++++++ DV + + E+ +Y S+++
Sbjct: 372 IIAIGNGTASRES-----EAFISQLIKDNNLDVDYAI-------ISEAGASVYSASKLAK 419
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQ 643
++ P + + AV++ R LQ+PLA + + + + ++ + + ++
Sbjct: 420 EEFPDYQVEERSAVSIARRLQDPLAELVKIEPKAISVGQY-----QHDIAQKQLEEQLDF 474
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAH 703
V+ N VG+DIN A + LQ+++GL A ++ + G RK+ +
Sbjct: 475 VVEKAVNNVGVDINTA-----SVSLLQYVAGLNSGVAKNIIKYRDENGKFTNRKEIMNVS 529
Query: 704 GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
LG K + A+GFLR+ + D D T IHPE+Y A++L K
Sbjct: 530 KLGAKTYQQAIGFLRIPGAN---------DPFDATAIHPENYQQAKKLLK 570
>gi|399887145|ref|ZP_10773022.1| S1 RNA-binding domain-containing protein [Clostridium arbusti
SL206]
Length = 718
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 142/653 (21%), Positives = 279/653 (42%), Gaps = 97/653 (14%)
Query: 274 QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR 333
Q + GA + + IS E RK++R++ ++ T + D + + ++ +
Sbjct: 155 QEAINGAGDIISEMISDEAEYRKWIRNLVQKEGIIETSGSSDEPTPYEMYYDY------- 207
Query: 334 EKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWND 393
++ + K + L I + E+EK+L V + + YL++ K + +
Sbjct: 208 KEAVDKIPPHRILAINRGEKEKVLSVKVTCDGGRII--------DYLNNKCLKGNEKTDK 259
Query: 394 QRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
E +KD+L + PS+ +E RS + + + + L + P + K
Sbjct: 260 YVENSVKDSLKRLIYPSIEREIRSELFEVGEDGAIEIFKSNLKALLMQSPIKGK------ 313
Query: 454 DEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQE- 511
+ PG + +LD +G+++D+ + +ND E
Sbjct: 314 --------AVLGYDPGFRTGCKIAVLDETGKLLDIATVYA-----------TAPQNDVEG 354
Query: 512 --RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGD 569
R+LK ++ ++ +V G ++L + + E++ ++++E + MD L V
Sbjct: 355 SIRVLKQLI-YKYNV---GMISLGNGTASRESEEVVARLIKEVKDE--KNMD-LYYVIVS 407
Query: 570 ESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLE 629
E+ +Y S ++S + P +++ A+++GR LQ+PLA + + P S + +
Sbjct: 408 EAGASVYSASELASKEYPDINVSIRGAISIGRRLQDPLAELVKI-DPK----SIGVGQYQ 462
Query: 630 NFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVR 689
+ +TP + ++ V+ D N VG+D+N+A + L ++SG+ A ++
Sbjct: 463 HDVTPKKMDESLKGVVEDCVNSVGVDLNIATP-----SLLSYVSGVNSNIAKNIVDYREE 517
Query: 690 AGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQ 749
G +RK+ + LG K + GFLRV S +A LD+T +HPESY A+
Sbjct: 518 KGKFKSRKELLKVKRLGPKAYEQCAGFLRVMESKEA---------LDNTSVHPESYKAAK 568
Query: 750 ELAKEV--YNRDI-EGDLNDDEDALE-MAIEHVRDRPDLLKTYLLDRHIKEKKRENKRET 805
EL + +DI EG L D + L+ + ++ + ++ ++ LLD
Sbjct: 569 ELLDILGYTEKDIKEGKLVDMDSKLKFIGVDKLAEKLEIGVPTLLD-------------- 614
Query: 806 LYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICV 865
I +E+ +D R + +P I+ D + G TVR V A
Sbjct: 615 ---IVKEVKKPGRDPREEMPKPVLKTGIIDITQLKPDMILTG-----TVRNVADFGAFVD 666
Query: 866 LESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
+ G++ SD + L D + GDI+ ++ I + R ++ L ++
Sbjct: 667 IGVHQDGLVHISQLSDKFVKHPL-DIVKVGDIVEVRVLEIDEKRNRISLTMKK 718
>gi|387816403|ref|YP_005676747.1| transcription accessory protein (S1 RNA-binding domain)
[Clostridium botulinum H04402 065]
gi|322804444|emb|CBZ01994.1| transcription accessory protein (S1 RNA-binding domain)
[Clostridium botulinum H04402 065]
Length = 718
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 165/724 (22%), Positives = 300/724 (41%), Gaps = 133/724 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A ++ LE G+ +D K E + K
Sbjct: 106 RPKRRTRATIAEEKGLKPLA------------EIILE--GNFKKDIKVYASEFINEEK-- 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC-----PTPDGDSAIDSF 323
+ + LQGA + + IS E RK++R+ + V+ T PTP + +
Sbjct: 150 EVKTIEEALQGAMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTP-----YEMY 204
Query: 324 HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ + ++ ++ + L I + E+EK+L + ED K+ K L
Sbjct: 205 YDY-------KENVKNIPPHRILAINRGEKEKILTAKVTCNED---KIIDYLKSRSLKG- 253
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+K ++ ++ +KD+L + PS+ +E RS ++ + + + + + L + P
Sbjct: 254 -NKETDVYIEES---VKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K + + PG + +LD +G+++D T
Sbjct: 310 IKDK--------------VVLGYDPGFRTGCKIAVLDETGKLLD-------TATVYATAP 348
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
Q + + L K + + V+ LG S S E+I KM++E + G +
Sbjct: 349 QNDVEGSIKVLKKLIYKYDVDVISLGNGTASRES-----EEVISKMLKEIKEEKGKD--- 400
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ V E+ +Y S++++++ P +++ A+++GR LQ+PLA + + G G+
Sbjct: 401 IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQ 460
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L G++E D N VG+D+N A + L +ISG+
Sbjct: 461 YQHDVSQKKLDESLK-----GVVE----DCVNAVGVDLNTATP-----SLLSYISGINSS 506
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ G RK+ + LG+K F GFLRV S + LD+T
Sbjct: 507 IAKNIVAYREEIGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEP---------LDNT 557
Query: 739 RIHPESY-------GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
+HPESY L Q K+V N ++ D++D + + ++ + ++ D+ K LLD
Sbjct: 558 GVHPESYEGTKKFLSLLQYDIKDVKNNKLQ-DIDDRVN--NIGLDDICNKIDIGKPTLLD 614
Query: 792 RHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT-LAEGRVV 850
IKE K+ + D R +P + +G + T L V+
Sbjct: 615 -IIKEIKKPGR----------------DPREDLPKP------ILKTGIVDITQLKPDMVL 651
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY 910
TVR V A + G++ SD + L D + GDI+ +I + + R
Sbjct: 652 MGTVRNVADFGAFVDIGVHQDGLVHISQLSDSFVKHPL-DIVKVGDIVEVRILEVDQKRN 710
Query: 911 QVFL 914
++ L
Sbjct: 711 RISL 714
>gi|292670676|ref|ZP_06604102.1| YhgF like protein [Selenomonas noxia ATCC 43541]
gi|292647703|gb|EFF65675.1| YhgF like protein [Selenomonas noxia ATCC 43541]
Length = 729
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 185/845 (21%), Positives = 333/845 (39%), Gaps = 168/845 (19%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL +D+ R + R
Sbjct: 34 IPFIARYRKEATGSL-------------DDEILRR---------------------IAAR 59
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L+S K R EE RI ++ ++ D++ +++E A+ + ++D L+ P
Sbjct: 60 LTYLRSLVK-RQEEIIARIEEQGKMT------DALREAIETAQKLQSLED------LYRP 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ K+ T+ S GL ++A SE G
Sbjct: 107 ----------YKQ-KKHTRASIARARGLEQLADAILLQSEMHG----------------- 138
Query: 257 TPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
TPE+ A+ F A S L GAR + A ++ + +R+ +R F NA++ T
Sbjct: 139 TPEQYAAPFVSAEKEVPSPADALAGARDIIAETVTDDAELRRLIREKFWKNALLETALDV 198
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
+ A F + G +P+R + L I + E ++ L V I + ++ +
Sbjct: 199 KAEDA-HVFQMYDGYS----EPVRTLPSHRILAINRGERKRCLTVRISVDHEAYIE---- 249
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
++ + + +++ + ++D L+PS+ +E R+ ++ A+ + +G+
Sbjct: 250 ----WICGRICRHPSIFSAELRTAIEDGYKRLLVPSLERELRAQLTELAEEKAIKLFGR- 304
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
+ A VL PG + ++D++G +VL +G +
Sbjct: 305 -----------NLRQLLLQPPLAGHTVLG--LDPGYRTGCKMAVVDATG---NVLASGVI 348
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
Q + + +K + KF+ H ++ +G S YE + V
Sbjct: 349 ----QITKSEGERKAAALSVQKFIKTHGVTLISIGNGTAS--------YE-TEQFVAALI 395
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
RD +++ ++ + +E+ +Y S+++ ++LP ++ AV++ R +Q+PLA + +
Sbjct: 396 RD--NKLKDVHYLITNEAGASVYSASQLAKEELPSYDVTIRGAVSIARRVQDPLAELVKI 453
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ ++ ++ E ++ + D N VG+D+N A A L
Sbjct: 454 DPQAIGVGQ---------YQHDVSQKELKERLDAAVEDAVNHVGVDLNTA-----SPALL 499
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
+ I+G+ A ++ + G RK LG F GFLR+ G+
Sbjct: 500 RRIAGINAAVAKNIVAYRNKNGRFTNRKALHKVSRLGDAAFTQCAGFLRI-YGGETP--- 555
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYL 789
LD T +HPESY LA+ + E+ E DL D +A++ R P L
Sbjct: 556 -----LDGTAVHPESYELARAILAELGT--AEDDLRDRAKFPALALKTARAEPAGLA--- 605
Query: 790 LDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
KK T+ I R + +D R + P + +S LA G +
Sbjct: 606 -------KKLGAGIPTVTDILRAIARPGRDPREELPAPLMRQNIVKLSD-----LAIGTI 653
Query: 850 VQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNR 909
+ TVR + A + AG+L + S L D L GD L I S+ + R
Sbjct: 654 LPGTVRNITDFGAFIDIGLKQAGLLHISEMSCRRVRHPL-DILSVGDALDVMIISVDEER 712
Query: 910 YQVFL 914
++ L
Sbjct: 713 ERIGL 717
>gi|161752|gb|AAC37171.1| cnjB [Tetrahymena thermophila]
gi|737494|prf||1922371A cnjB gene
Length = 1748
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 203/483 (42%), Gaps = 60/483 (12%)
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKA 351
P ++K++ +M AV+ST P + +H+F K + +KPL + ++L I +A
Sbjct: 457 PIIKKFIIDNYMKYAVLSTSPQAHV-IGFNIYHEFFAAKKIIKKPLSEITSNEFLTILQA 515
Query: 352 EEEKLLQVTIKLP---EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
++ L++ I LP + + ++ + +H+ SKS L N + +L+ L N+L
Sbjct: 516 SQQNLIECKILLPWQIDQGEDLIYREISQHFQPHLASKSESL-NSYTQNLLQRLLKNYLY 574
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
P ++ + ++ + + +S GPY +D D+ P +
Sbjct: 575 PYAQQQVYKHLENKSLTEVRDICVSKFKEYISYGPYLIRDRQ---DQLVKPETIL----- 626
Query: 469 GKPETTFVMLDSSGEVVDV---------LFTGCLTLRSQNVRDQQSKKNDQE--RLLKFM 517
+F + +SSG +V V + CL N S+K +QE L +F+
Sbjct: 627 -----SFYVHESSG-IVGVSMISQDGKEIHKNCLEYYF-NADKLVSQKREQEIKNLYEFI 679
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
+ QP+V+++ + LK ++Y I FK + + I+ +++L Y
Sbjct: 680 RNRQPYVIIVSSNCSRALVLKSNLY-IQFKNLCRN------------ILMCEQTLMTCYL 726
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG-PGREILSWKLCPLENFLTPDE 636
N + S Q P K + A + Q L V +L +L KL P + + E
Sbjct: 727 N-QSSFIQSPKDKY-IFLARKQAKAFQFRLLEVCSLWNYESNPLLEIKLHPFQKKVDKKE 784
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFA-PLQFISGLGPRKAASLQRSLVRA---GA 692
EQV+ + Q GL+ + F LQFI G GPRK+ +
Sbjct: 785 LQIRFEQVIQERICQDGLEFKTLFDKNLSFKDCLQFIPGFGPRKSHFFISQFEQGKDFKE 844
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
I +RK + + +G+ + VN + F+ +S +LLD T+I Y + +
Sbjct: 845 ITSRKKCIQLNLMGENLIVNCMAFMMFSKSD---------NLLDQTKIPYNQYFIVNHIV 895
Query: 753 KEV 755
+ +
Sbjct: 896 ETI 898
>gi|169350927|ref|ZP_02867865.1| hypothetical protein CLOSPI_01704 [Clostridium spiroforme DSM 1552]
gi|169291989|gb|EDS74122.1| Tex-like protein N-terminal domain protein [Clostridium spiroforme
DSM 1552]
Length = 714
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 196/871 (22%), Positives = 348/871 (39%), Gaps = 180/871 (20%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+L I+ I L+LL Q +PFIA YRKE L +D
Sbjct: 10 AKELEITEKQINAVLELLE-QGNTVPFIARYRKEATGGLDED------------------ 50
Query: 113 TLKWHKVLWAIHDLDKKW---LLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFD 169
I ++DK + + L KRK E+ R+ DE + L +QL
Sbjct: 51 ---------QIRNIDKYYQYQVNLLKRK------------EDVIRLIDEKGM-LTKQLEA 88
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
I K+ + E E +L+ P E KR TK + GL E S
Sbjct: 89 DILKATKLNEVE----------DLYRPYKE-----------KRKTKATEAKVKGL-EPLS 126
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEIS 289
K+ LSL PK +E A + + + +QGA + A IS
Sbjct: 127 KWI---------LSL---------PKGNIDEEAKKYLNDKVENIEDAIQGALDIIAEVIS 168
Query: 290 CEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ RK+V+ I + V+ T + + + + + + + L I
Sbjct: 169 DDIKYRKFVKDIIYKSGVIETKVKKKNSDETKVYEMY----YDYHERVNRIVSHRILAIN 224
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK---DALDNF 406
+AE+EK++ V I + +D L Y++ GV+K+ + E ILK D+L+
Sbjct: 225 RAEKEKVITVNINVNKDFLI--------EYINRGVTKNRN--SSVNEYILKAVEDSLNRL 274
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
LLPS+ +E R+ ++ +A L + L + P + K +
Sbjct: 275 LLPSIEREVRNELTEKASEQALKVFSINLEKLLMQAPLKDK--------------MVLGV 320
Query: 467 GPG-KPETTFVMLDSSGEV--VDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
P + ++D +G+V +D +F +T+ N D++ K LL + ++
Sbjct: 321 DPAYRTGCKLAVVDQTGKVLKIDKVF---ITIPKDN-YDKEKK-----ILLDIIKTYKIE 371
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
++ +G S S I K+++++ DV + + E+ +Y S+++
Sbjct: 372 IIAIGNGTASRES-----EAFISKLIKDNNLDVDYAI-------ISEAGASVYSASKLAK 419
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQ 643
++ P + + AV++ R LQ+PLA + + + + ++ + + ++
Sbjct: 420 EEFPDYQVEERSAVSIARRLQDPLAELVKIEPKAISVGQY-----QHDIAQKQLEEQLDF 474
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAH 703
V+ N VG+DIN A + LQ++SGL A ++ + G R++ +
Sbjct: 475 VVEKAVNSVGVDINTA-----SVSLLQYVSGLNSAVAKNIIKYRDEHGKFTNREEIKNVN 529
Query: 704 GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGD 763
LG K + ++GFLR+ + D D T IHPE+Y A+ L K + E +
Sbjct: 530 KLGSKTYQQSIGFLRIPGAN---------DPFDATAIHPENYQQAKALLKLINAS--EKE 578
Query: 764 LNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQ 823
L E A ++ ++ ++L+ +D + TL I I + R+
Sbjct: 579 LGTKEIASKLT---TINKENILEELKIDSY-----------TLDDIIDSFIKPNRSPRDN 624
Query: 824 YKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDW 883
Y P ++ I + L G V++ TVR V A + G++ S +
Sbjct: 625 YATPLLKKDILKI-----EDLKPGMVLEGTVRNVVDFGAFIDIGLKNDGLVHISKISHER 679
Query: 884 RDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
L DKL GDI+ + + N+++V L
Sbjct: 680 IKHPL-DKLSIGDIVEVYVIDVDVNKHRVGL 709
>gi|146182859|ref|XP_001025435.2| Zinc knuckle family protein [Tetrahymena thermophila]
gi|146143687|gb|EAS05190.2| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 1748
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 203/483 (42%), Gaps = 60/483 (12%)
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKA 351
P ++K++ +M AV+ST P + +H+F K + +KPL + ++L I +A
Sbjct: 457 PIIKKFIIDNYMKYAVLSTSPQAHV-IGFNIYHEFFAAKKIIKKPLSEITSNEFLTILQA 515
Query: 352 EEEKLLQVTIKLP---EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
++ L++ I LP + + ++ + +H+ SKS L N + +L+ L N+L
Sbjct: 516 SQQNLIECKILLPWQIDQGEDLIYREISQHFQPHLASKSESL-NSYTQNLLQRLLKNYLY 574
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
P ++ + ++ + + +S GPY +D D+ P +
Sbjct: 575 PYAQQQVYKHLENKSLTEVRDICVSKFKEYISYGPYLIRDRQ---DQLVKPETIL----- 626
Query: 469 GKPETTFVMLDSSGEVVDV---------LFTGCLTLRSQNVRDQQSKKNDQE--RLLKFM 517
+F + +SSG +V V + CL N S+K +QE L +F+
Sbjct: 627 -----SFYVHESSG-IVGVSMISQDGKEIHKNCLEYYF-NADKLVSQKREQEIKNLYEFI 679
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
+ QP+V+++ + LK ++Y I FK + + I+ +++L Y
Sbjct: 680 RNRQPYVIIVSSNCSRALVLKSNLY-IQFKNLCRN------------ILMCEQTLMTCYL 726
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG-PGREILSWKLCPLENFLTPDE 636
N + S Q P K + A + Q L V +L +L KL P + + E
Sbjct: 727 N-QSSFIQSPKDKY-IFLARKQAKAFQFRLLEVCSLWNYESNPLLEIKLHPFQKKVDKKE 784
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFA-PLQFISGLGPRKAASLQRSLVRA---GA 692
EQV+ + Q GL+ + F LQFI G GPRK+ +
Sbjct: 785 LQIRFEQVIQERICQDGLEFKTLFDKNLSFKDCLQFIPGFGPRKSHFFISQFEQGKDFKE 844
Query: 693 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
I +RK + + +G+ + VN + F+ +S +LLD T+I Y + +
Sbjct: 845 ITSRKKCIQLNLMGENLIVNCMAFMMFSKSD---------NLLDQTKIPYNQYFIVNHIV 895
Query: 753 KEV 755
+ +
Sbjct: 896 ETI 898
>gi|168182214|ref|ZP_02616878.1| RNA-binding protein [Clostridium botulinum Bf]
gi|237793495|ref|YP_002861047.1| RNA-binding protein [Clostridium botulinum Ba4 str. 657]
gi|182674704|gb|EDT86665.1| RNA-binding protein [Clostridium botulinum Bf]
gi|229263673|gb|ACQ54706.1| RNA-binding protein [Clostridium botulinum Ba4 str. 657]
Length = 718
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 144/608 (23%), Positives = 262/608 (43%), Gaps = 109/608 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A G+ L G+ ED K E + K
Sbjct: 106 RPKRRTRATIAEEKGLNPLA----------GIILE----GNFREDIKVYASEFVNEEK-- 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC-----PTPDGDSAIDSF 323
+ + LQGA + + IS E RK++R+ + V+ T PTP + +
Sbjct: 150 EVKTIEEALQGAMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTP-----YEMY 204
Query: 324 HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ + ++ ++ + L I + E+EK+L + ED K+ K L
Sbjct: 205 YDY-------KENVKNIPPHRILAINRGEKEKILTAKVTCNED---KIIDYLKSRSLKGN 254
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
A + E +KD+L + PS+ +E RS ++ + + + + + L + P
Sbjct: 255 KETDAYI-----EESVKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K + + PG + +LD +G+++D T + +
Sbjct: 310 IKDK--------------VVLGYDPGFRTGCKIAVLDETGKLLD---TATVYATAPQNDV 352
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
+ S K +E + K+ +D V+ LG S S ++ I ++ ++ EE +D+ +
Sbjct: 353 EGSIKILKELIYKYDVD----VISLGNGTASRES-EEVISRMLKEIKEEKSKDIYY---- 403
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
V E+ +Y S++++++ P +++ A+++GR LQ+PLA + + G G+
Sbjct: 404 ---VIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQ 460
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L G++E D N VG+D+N A + L +ISG+
Sbjct: 461 YQHDVSQKKLDESLK-----GVVE----DCVNAVGVDLNTATP-----SLLSYISGINSS 506
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ G RK+ + LG+K F GFLRV S + LD+T
Sbjct: 507 IAKNIVAYREEVGKFKNRKELLKVKRLGQKAFQQCAGFLRVMESKEP---------LDNT 557
Query: 739 RIHPESY-------GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
+HPESY L Q K+V N ++ D++D + + ++ + ++ D+ K LLD
Sbjct: 558 GVHPESYEGTKKFLSLLQYDIKDVKNNKLQ-DIDDRVN--NIGLDDICNKIDIGKPTLLD 614
Query: 792 RHIKEKKR 799
IKE K+
Sbjct: 615 -IIKEIKK 621
>gi|313146296|ref|ZP_07808489.1| RNA-binding protein [Bacteroides fragilis 3_1_12]
gi|313135063|gb|EFR52423.1| RNA-binding protein [Bacteroides fragilis 3_1_12]
Length = 707
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 127/557 (22%), Positives = 222/557 (39%), Gaps = 104/557 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L + +++ + S F
Sbjct: 106 KPKRKTRAEAARQKGL-----------EPLALLIMMQR--------ENNLNARVSAFVKG 146
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ L+GAR + A ++S + R VR++F AV++ D + +
Sbjct: 147 DVKDADDALKGARDIIAEQVSEDERARNAVRNLFARQAVITAKVVKGKDEEAAKYRDY-- 204
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ PL++ + L I++AE E LL+V+I P+D +C E V +
Sbjct: 205 --FDFSSPLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDD------ECLERLYRQFVRSTN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ E + +DA L PS+ E +L RA + + + L + P +K
Sbjct: 256 ECGRHVSEAV-QDAYRRLLKPSIETEFAALSKERADDEAIRVFAENLRQLLLAPPLGQK- 313
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ---Q 504
RV+ PG + V LD+ G +V ++N+
Sbjct: 314 -----------RVMGI--DPGFRTGCKVVCLDAQGNLV----------HNENIYPHPPVD 350
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE-- 562
K +L K + ++ + +G S E V H+ +
Sbjct: 351 KKAEAASKLRKMIEAYKIEAIAIGNGTAS----------------RETETFVTHQQFDRP 394
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ + E +Y S+I+ D+ P V+ AV++ R L +PLA + + G G+
Sbjct: 395 VQVFVVSEQGASIYSASKIARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVGQ 454
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L +Q + + NQVG+++N A L +ISGLGP+
Sbjct: 455 YQHDVDQTKLKKSL---------DQTVENCVNQVGVNLNTASSH-----LLTYISGLGPQ 500
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ GA +RK+ + +G K F GFLR+ G+ + LD+T
Sbjct: 501 LAQNIVSYRAANGAFSSRKELMKVPRMGAKAFEQCAGFLRI-AGGE--------NPLDNT 551
Query: 739 RIHPESYGLAQELAKEV 755
+HPESYG+ ++AK++
Sbjct: 552 AVHPESYGIVNQMAKDL 568
>gi|374597441|ref|ZP_09670445.1| Tex-like protein [Gillisia limnaea DSM 15749]
gi|373872080|gb|EHQ04078.1| Tex-like protein [Gillisia limnaea DSM 15749]
Length = 708
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 155/691 (22%), Positives = 286/691 (41%), Gaps = 165/691 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE L +L++ E+ + I DL + L+KR
Sbjct: 31 IPFIARYRKE----LTGNLDEVEIEH--------------------ISDLLGNFKELEKR 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KS + K EE+ + L ++ ++E A T ++D+ L F
Sbjct: 67 KSTIL----KAIEEQ-------------KALTKALKMAIEKAATLAVLEDLYLPF----- 104
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+ R TK + + GL E +K S ++ ++L
Sbjct: 105 ------------KKTRKTKADAAREKGL-EPFAKILMSQKEGNIEL-------------- 137
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTP 314
+A F A S + ++GA+++ A ++ VR +R ++ AV+ T T
Sbjct: 138 ----IAMRFITAQVKSVEEAIEGAKNIIAEWVNENQLVRDAIRKLYQRQAVIRTKVVKTE 193
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
+ F Q+ W E+PL+K ++L + +A E +L++ I++ D++ L
Sbjct: 194 EKTEKAQKFQQY--FDW--EEPLKKTPSHRFLAMFRAYSEGILRLKIEV--DTIQSL--- 244
Query: 375 CKEHYLSDGVSKSAQLWNDQRELI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
+S + KS N+ ++ I ++D+ L PS E S +A ++ +
Sbjct: 245 ---DLISGIILKSG--ANNSKKYIREAIEDSYKRLLKPSFSTEFLSEAKAKADKDAILVF 299
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFT 490
L + P K R+LA PG K V LD +G++V
Sbjct: 300 ANNLEQLLLSPPLGGK------------RILAI--DPGFKSGCKVVCLDENGQLV----- 340
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
++N+ +K + + + ++ A N+ S+ + + E
Sbjct: 341 -----HNENIYPHPPQK-------ELEIAGRKIDSLVKAYNIEAISIGNGTAS---RETE 385
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E R + + ELS+ +E+ +Y S+I+ ++ P V+ AV++GR L +PLA +
Sbjct: 386 EFIRKIPG-LKELSVFVVNEAGASIYSASKIAREEFPSFDITVRGAVSIGRRLSDPLAEL 444
Query: 611 ATL----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
+ G G+ E+ KL ++ V+ N++G+++N A +E
Sbjct: 445 VKIDPKSIGVGQYQHEVDQAKL------------KDKLDNVVTSCVNRIGINVNTA-SKE 491
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
L ++SG+GP A ++ G + +RK+ + LG K + + FLR++
Sbjct: 492 L----LSYVSGIGPGLAGNIIDYRKENGNLKSRKELLKIPRLGAKAYEQSAAFLRIKNPK 547
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
++LDD+ +HPESY + +E+AK+
Sbjct: 548 ---------NVLDDSAVHPESYHIVEEIAKD 569
>gi|423279138|ref|ZP_17258051.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis HMW 610]
gi|404585307|gb|EKA89923.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis HMW 610]
Length = 707
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 127/557 (22%), Positives = 222/557 (39%), Gaps = 104/557 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L + +++ + S F
Sbjct: 106 KPKRKTRAEAARQKGL-----------EPLALLIMMQR--------ENNLNARVSAFVKG 146
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ L+GAR + A ++S + R VR++F AV++ D + +
Sbjct: 147 DVKDADDALKGARDIIAEQVSEDERARNAVRNLFARQAVITAKVVKGKDEEAAKYRDY-- 204
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ PL++ + L I++AE E LL+V+I P+D +C E V +
Sbjct: 205 --FDFSSPLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDD------ECLERLYRQFVRSTN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ E + +DA L PS+ E +L RA + + + L + P +K
Sbjct: 256 ECGRHVSEAV-QDAYRRLLKPSIETEFAALSKERADDEAIRVFAENLRQLLLAPPLGQK- 313
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ---Q 504
RV+ PG + V LD+ G +V ++N+
Sbjct: 314 -----------RVMGI--DPGFRTGCKVVCLDAQGNLV----------HNENIYPHPPVD 350
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE-- 562
K +L K + ++ + +G S E V H+ +
Sbjct: 351 KKAEAASKLRKMIEAYKIEAIAIGNGTAS----------------RETETFVTHQQFDRP 394
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ + E +Y S+I+ D+ P V+ AV++ R L +PLA + + G G+
Sbjct: 395 VQVFVVSEQGASIYSASKIARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVGQ 454
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L +Q + + NQVG+++N A L +ISGLGP+
Sbjct: 455 YQHDVDQTKLKKSL---------DQTVENCVNQVGVNLNTASSH-----LLTYISGLGPQ 500
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ GA +RK+ + +G K F GFLR+ G+ + LD+T
Sbjct: 501 LAQNIVSYRAANGAFSSRKELMKVPRMGAKAFEQCAGFLRI-AGGE--------NPLDNT 551
Query: 739 RIHPESYGLAQELAKEV 755
+HPESYG+ ++AK++
Sbjct: 552 AVHPESYGIVNQMAKDL 568
>gi|401564434|ref|ZP_10805327.1| Tex-like protein N-terminal domain protein [Selenomonas sp. FOBRC6]
gi|400188836|gb|EJO22972.1| Tex-like protein N-terminal domain protein [Selenomonas sp. FOBRC6]
Length = 729
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 199/862 (23%), Positives = 337/862 (39%), Gaps = 180/862 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL D+ R ++ R
Sbjct: 34 IPFIARYRKEATGSL-------------EDEMLRQ---------------------VETR 59
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L+S K R EE RI ++ +L D + ++EAAE + ++D L+ P
Sbjct: 60 LTYLRSLVK-RQEEICARIEEQGKLT------DELRAAIEAAEKLQTLED------LYRP 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR T+ S + GL +A+ E G
Sbjct: 107 ----------YKQKKR-TRASIARERGLEGLANAMLLQRETGG----------------- 138
Query: 257 TPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
TPE++A++F A ++ L GAR + A I E +R+ +R F +AV+ T
Sbjct: 139 TPEDIAASFVDAEKDVATAADALAGARDILAEMIMDEAELRRLMREKFWKSAVLETTLDA 198
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
D + A F + G +P+R + L + + E++ L V I + D
Sbjct: 199 DAEEA-QVFQMYDGYT----EPVRTLPSHRILAVNRGEKKGCLSVRIAV----------D 243
Query: 375 CKEH--YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ H ++ + + ++ D+ ++D L+P++ +E R+ ++ A+ + +G
Sbjct: 244 HEAHVDWIYKRIYQRPSIFEDELRASIEDGYKRLLVPALERELRAQLTEAAEEKAIAVFG 303
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTG 491
+ A VL PG + ++D++G +VL +G
Sbjct: 304 ------------HNLRQLLLQPPLAGHTVLG--LDPGYRTGCKVALVDATG---NVLASG 346
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
+ + R +++ + LLK + H ++ +G S YE + V
Sbjct: 347 VIHV----TRSDGERRSAAQALLKLIKTHGVTLISIGNGTAS--------YET-EQFVAA 393
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
RD +++ ++ + +E+ +Y S+++ D+LP ++ AV++ R +Q+PLA +
Sbjct: 394 LIRD--NDLKDVHYLITNEAGASVYSASQLAKDELPDYDVTIRGAVSIARRVQDPLAELV 451
Query: 612 TL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
+ G G+ ++ ++ + ++ + D N VG+D+N A A
Sbjct: 452 KIDPQAIGVGQ---------YQHDVSQKQLRETLDATVEDAVNHVGVDLNTA-----SPA 497
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L I+G+ A ++ G +RK LG F GFLR+ G+
Sbjct: 498 LLNRIAGINTTIAKNIVAYRNEHGRFTSRKTLRKVARLGDAAFTQCAGFLRI-HEGETP- 555
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL--- 784
LD T IHPESY LA R I +L DED L DR L
Sbjct: 556 -------LDGTAIHPESYELA---------RSILAELGADEDDLH-------DRAKLPAL 592
Query: 785 -LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT 843
LKT + KK T+ I + + +D R P + +S
Sbjct: 593 ALKTAQMSAAPLAKKLGAGVPTVTDILKAIARPGRDPREDLPAPLTRQNIVKLSD----- 647
Query: 844 LAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIK 903
LA G V++ TVR + A + AG+L + S R D L GD L I
Sbjct: 648 LAVGTVLKGTVRNITDFGAFIDIGLKQAGLLHISEMS-HRRVRHPLDVLSVGDSLDVMII 706
Query: 904 SIQKNRYQVFLVCRESEMRNNR 925
SI + R ++ L + E R
Sbjct: 707 SIDEARGRIGLSLKRMEKEKAR 728
>gi|376316852|emb|CCG00232.1| Tex-like protein, possibly transcriptional accessory factor
[uncultured Dokdonia sp.]
Length = 707
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 164/697 (23%), Positives = 270/697 (38%), Gaps = 159/697 (22%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
LDLL+ + +PFIA YRKE L D+ E + I +L
Sbjct: 22 LDLLN-EDCTLPFIARYRKEATGGL--------------DEVE----------IGKIIEL 56
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
+++ L+KRK ++ K EE+ L+ +L + I K+ + E
Sbjct: 57 KEQFETLEKRKKSIL----KSLEEQD---------VLSSELKNKIEKTQDLTTLE----- 98
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK 246
+L+ P YK+ KR TK + GL +A
Sbjct: 99 -----DLYLP----------YKK-KRKTKAETARVNGLEPLAKII--------------- 127
Query: 247 MGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA 306
M +DP E +A + +Q+ L+GARH+ + I+ +R +R A
Sbjct: 128 MSQNAQDP----EGLAHRYTNKEVPDAQSALEGARHIISEWINERADIRNNIREQLKRFA 183
Query: 307 VVST--CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP 364
+ T D F + W + L + + L I +AE E ++V + +
Sbjct: 184 TIETKVVKKMANDEKAQKFRDY--FDW--SESLSRCPSHRLLAILRAENEGYIRVKVVID 239
Query: 365 -EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
E +L+K+ E L SA Q EL +KDA L P++ E S A
Sbjct: 240 DERALDKI-----ERKLIRSRGDSAT----QIELAIKDAYKRLLFPALSNETLSEAKKTA 290
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSG 482
+ + K L + P K R+LA PG + V LD+ G
Sbjct: 291 DETAIQVFAKNLRQLLLGSPLGEK------------RILA--LDPGFRTGCKLVCLDAQG 336
Query: 483 EVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIY 542
++ L ++ + K +D+ + K + + A+ S +
Sbjct: 337 QL----------LHNETIYPHAPKNDDKGAIKKISSLTDAYKIEAIAIGNGTASRET--- 383
Query: 543 EIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRY 602
E + K + H + + + E+ +Y S+I+ D+ P V+ AV++GR
Sbjct: 384 ERLVKRI--------HFKNAMEVFVVSEAGASIYSASKIARDEFPNYDVTVRGAVSIGRR 435
Query: 603 LQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINL 658
LQ+PLA + + G G+ L+ L +Q + + N VG++IN
Sbjct: 436 LQDPLAELVKIDAKSIGVGQYQHDVDQTALQKSL---------DQTVENCVNAVGVNINT 486
Query: 659 AIHREWQFAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFL 717
A APL ++SG+GP+ A + R G TR++ LG+K FV A GFL
Sbjct: 487 A------SAPLLSYVSGIGPKLAEGVVRFRESEGPFKTRQEIKKVPRLGEKAFVQAAGFL 540
Query: 718 RVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
R+ + LD++ +HPE Y L +AK+
Sbjct: 541 RITGAENP---------LDNSSVHPERYKLVASIAKD 568
>gi|423257928|ref|ZP_17238851.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL07T00C01]
gi|423265104|ref|ZP_17244107.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL07T12C05]
gi|387777374|gb|EIK39471.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL07T00C01]
gi|392704837|gb|EIY97972.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL07T12C05]
Length = 707
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 222/558 (39%), Gaps = 106/558 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQ-LGLQLSLEKMGDELEDPKETPEEMASNFKC 267
+PKR T+ + + GL +A E LG ++ GD
Sbjct: 106 KPKRKTRAEAARQKGLEPLALLLMMQRENNLGSRIPAFVKGD------------------ 147
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFA 327
++ L+GAR + A ++S + R VR++F AV+S D + +
Sbjct: 148 --VKDAEDALKGARDIIAEQVSEDERARNAVRNLFARQAVISAKVVKGKDEEAAKYRDY- 204
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ PL++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 205 ---FDFSSPLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDD------ECLER-LDRQFVRS 253
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
Q ++DA L PS+ E SL +A + + + L + P +K
Sbjct: 254 NNECGRQVAEAVQDAYRRLLKPSIETEFASLSKEQADDEAIRVFAENLRQLLLAPPLGQK 313
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ--- 503
RV+ PG + V LD+ G +V ++N+
Sbjct: 314 ------------RVMG--IDPGFRTGCKVVCLDAQGNLV----------HNENIYPHPPV 349
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE- 562
K +L K + ++ + +G S E V H+ +
Sbjct: 350 DKKTEAASKLRKMIEAYKIEAIAIGNGTAS----------------RETENFVTHQQCDR 393
Query: 563 -LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
+ + E +Y S+ + D+ P V+ AV++ R L +PLA + + G G
Sbjct: 394 PVQVFVVSEQGASIYSASKTARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVG 453
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ L+ L +Q + + NQVG+++N A L +ISGLGP
Sbjct: 454 QYQHDVDQTKLKKSL---------DQTVENCVNQVGVNLNTASSH-----LLTYISGLGP 499
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
+ A ++ GA +RK+ + +G K F GFLR+ G+ + LD+
Sbjct: 500 QLAQNIVAYRAANGAFASRKELMKVPRMGAKAFEQCAGFLRI-AGGE--------NPLDN 550
Query: 738 TRIHPESYGLAQELAKEV 755
T +HPESYG+ Q++AK++
Sbjct: 551 TAVHPESYGIVQQMAKDL 568
>gi|365843178|ref|ZP_09384129.1| Tex-like protein [Flavonifractor plautii ATCC 29863]
gi|364573108|gb|EHM50623.1| Tex-like protein [Flavonifractor plautii ATCC 29863]
Length = 721
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 117/504 (23%), Positives = 212/504 (42%), Gaps = 80/504 (15%)
Query: 257 TPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS-IFMDNAVVSTCPT 313
PEE A F +++ LQGA + A IS + +RK +R ++ ++VS
Sbjct: 137 APEEAAGAFIDPEKGVETAEDALQGASDIIAERISDDADIRKRLRELVWKKGSLVSAAAA 196
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+ + + + + PL + + Q L I + E E +L+V++++ ++
Sbjct: 197 KEPEDTVYRLY------YAFRSPLNRVQGHQVLAINRGEREGVLKVSVEMDREAA---LI 247
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ L+ G A + +DA D + PS+ +E R L++ +A + +G
Sbjct: 248 PIRRAVLNPGAPAMAFVRAAA-----EDAYDRLIFPSVEREMRGLLTEQADEGAIKMFGL 302
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L + P + + PG + ++D++G+V+D
Sbjct: 303 NLKPLLMQPPVKG--------------FVTMGLDPGYRNGCKVAVVDATGKVLD------ 342
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
T Q+ K+ + L K + H + +G S + +M E
Sbjct: 343 -TAVVYPTFSQRKKEEAIDALAKLIRRHGVAHIAIGNGTASRET---------EQMTVEL 392
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
R +G + + + +E+ +Y S++++++ P N++ AV++ R LQ+PLA +
Sbjct: 393 IRRLGGGVSYMIV---NEAGASVYSASKLAAEEFPDYDVNLRSAVSIARRLQDPLAELVK 449
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ L+ L+ G++E D N VG+D+N A AP
Sbjct: 450 IDPKSIGVGQYQHDMPQARLDETLS-----GVVE----DCVNAVGVDLNTA------SAP 494
Query: 669 L-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L +++GL A ++ + GA TRK + LG K F GFLRV S
Sbjct: 495 LLSYVAGLNNTTARNIVKYREENGAFTTRKGVLKVPKLGPKAFEQCAGFLRVPESR---- 550
Query: 728 SSQFIDLLDDTRIHPESYGLAQEL 751
++LD T +HPESYG A+ L
Sbjct: 551 -----NVLDHTGVHPESYGAAEAL 569
>gi|46580651|ref|YP_011459.1| S1 RNA-binding domain-containing protein [Desulfovibrio vulgaris
str. Hildenborough]
gi|387153939|ref|YP_005702875.1| Tex-like protein [Desulfovibrio vulgaris RCH1]
gi|46450070|gb|AAS96719.1| S1 RNA binding domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234383|gb|ADP87237.1| Tex-like protein protein-like protein [Desulfovibrio vulgaris RCH1]
Length = 723
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 154/682 (22%), Positives = 262/682 (38%), Gaps = 144/682 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPF+A YRKE L +EV L A+ D ++ L KR
Sbjct: 38 IPFVARYRKEATGGL------DEV------------------ALTALRDGCERLRTLDKR 73
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ A+ + +R +QL ++K+L AA T ++D+ L F
Sbjct: 74 RDAIIASMTER-----------------EQLTPDLAKALHAATTLTALEDIYLPF----- 111
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A + EQ G Q + +++ K
Sbjct: 112 ------------RPKRVTRAAKARERGLAPLAERL---LEQRGAQAG-QLAAPFVDEAKG 155
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV-STCPTPD 315
P+ + A L GAR + A +S + R +R IF+ A + S
Sbjct: 156 VPD-------------TAAALAGARDIIAETVSEDRATRATLRDIFVRRATLRSKVARGK 202
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+ A F + P + L + + E E+LL V ++ P+D +
Sbjct: 203 EEQAATYRDHFDRSEHAAAAPAHRL-----LAMFRGEREELLDVRVR-PDDDIA--VGAL 254
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+L G + SA + L DA + L PS+ E R+ + RA++ + + L
Sbjct: 255 HRRWLK-GRASSAGTDAAEVATALTDAWNRLLAPSLENEFRTALRERAEAEAIAVFAANL 313
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ P + R LA PG + V LD+ G ++ LT
Sbjct: 314 RELLLAPPMGPR------------RTLA--LDPGWRTGAKLVCLDAQGALLHHEVIHPLT 359
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
+ R + L + H V +G + T+ ++ E K P
Sbjct: 360 GGDRATRAAAT-------LRELCTRHGIEAVAVG----NGTAGRE--TEAFVKSAGLPP- 405
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
+++ DE +Y S ++ + P V+ A+++GR L +PLA + +
Sbjct: 406 -------HVTVALVDERGASVYSASEVARAEFPDHDVTVRGAISIGRRLMDPLAELVKV- 457
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP--LQFI 672
+ S + ++ + + +E+V+ N VG+D+N A +P L ++
Sbjct: 458 ----DPRSLGVGQYQHDVDQNALRRALEEVVASCVNAVGVDVNTA-------SPELLAYV 506
Query: 673 SGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
SG+GP A + G TR+D + LG K F A GFLRV +
Sbjct: 507 SGIGPALAKGIVALRAVNGPFRTRRDLLKVPRLGPKAFEQAAGFLRVHGGPEP------- 559
Query: 733 DLLDDTRIHPESYGLAQELAKE 754
LD + +HPESY + + +A++
Sbjct: 560 --LDASAVHPESYAVVRRMAED 579
>gi|424662970|ref|ZP_18100007.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis HMW 616]
gi|404576660|gb|EKA81398.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis HMW 616]
Length = 707
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 127/557 (22%), Positives = 222/557 (39%), Gaps = 104/557 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L + +++ + S F
Sbjct: 106 KPKRKTRAEAARQKGL-----------EPLALLIMMQR--------ENNLNARVSAFVKG 146
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ L+GAR + A ++S + R VR++F AV++ D + +
Sbjct: 147 DVKDADDALKGARDIIAEQVSEDERARNAVRNLFARQAVITAKVVKGKDEEAAKYRDY-- 204
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ PL++ + L I++AE E LL+V+I P+D +C E V +
Sbjct: 205 --FDFSSPLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDD------ECLERLYRQFVRSTN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ E + +DA L PS+ E +L RA + + + L + P +K
Sbjct: 256 ECGRHVSEAV-QDAYRRLLKPSIETEFAALSKERADDEAIRVFAENLRQLLLAPPLGQK- 313
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ---Q 504
RV+ PG + V LD+ G +V ++N+
Sbjct: 314 -----------RVMGI--DPGFRTGCKVVCLDAQGNLV----------HNENIYPHPPVD 350
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE-- 562
K +L K + ++ + +G S E V H+ +
Sbjct: 351 KKAEAASKLRKMIEAYKIEAIAIGNGTAS----------------RETETFVTHQQFDRP 394
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ + E +Y S+I+ D+ P V+ AV++ R L +PLA + + G G+
Sbjct: 395 VQVFVVSEQGASIYSASKIARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVGQ 454
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L +Q + + NQVG+++N A L +ISGLGP+
Sbjct: 455 YQHDVDQTKLKKSL---------DQTVENCVNQVGVNLNTASSH-----LLTYISGLGPQ 500
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ GA +RK+ + +G K F GFLR+ G+ + LD+T
Sbjct: 501 LAQNIVSYRAANGAFSSRKELMKVPRMGAKAFEQCAGFLRI-AGGE--------NPLDNT 551
Query: 739 RIHPESYGLAQELAKEV 755
+HPESYG+ ++AK++
Sbjct: 552 AVHPESYGIVNQMAKDL 568
>gi|358068066|ref|ZP_09154536.1| hypothetical protein HMPREF9333_01417 [Johnsonella ignava ATCC
51276]
gi|356693610|gb|EHI55281.1| hypothetical protein HMPREF9333_01417 [Johnsonella ignava ATCC
51276]
Length = 715
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 141/633 (22%), Positives = 255/633 (40%), Gaps = 117/633 (18%)
Query: 144 YKKRYEEE-SRRIYDETRLALNQQL--FDSISKSLE---AAETEREVDDVDLKFNLHFPP 197
+ RY +E + + DE LN++L ++S+ +E AA E+ V D +LK +
Sbjct: 33 FIARYRKEMTGSLNDEVLRNLNERLGQLRNLSERMEQVIAALDEQGVLDDELKNRILNAS 92
Query: 198 GEVGVDEGQYK--RPKRSTKYSSCSKAGL-----WEVASKFGYSSEQLGLQLSLEKMGDE 250
V V E Y+ RPK+ T+ S+ + GL +A + Y + +K G E
Sbjct: 93 ALVEV-EDLYRPYRPKKRTRASTAREKGLEGLSDIILAQEITYPVTEAAAAFISDKEGLE 151
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR-SIFMDNAVVS 309
+ED K A + GA + A +IS R +R I D + S
Sbjct: 152 VEDEK-------------------AAIAGALDIIAEKISDNADFRARIRRDIMRDGTISS 192
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
+ S ++++ F E+ + + L I + E+EK+L V I PED +
Sbjct: 193 QAKDKEETSVYENYYSF-------EESACRCAGHRILAINRGEKEKVLNVKINTPEDVII 245
Query: 370 KLF--------SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSG 421
+ E Y+ + VS D+ + P++ +E R+ ++
Sbjct: 246 NFLERQIIKNNNSFTEPYIKEAVS---------------DSYKRLMQPAIEREIRNELTL 290
Query: 422 RAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDS 480
RA++ + +G+ L + P + K + W P + ++D
Sbjct: 291 RAETGAIRVFGENLKQLLMQPPVKGK--------------VVLGWDPAFRTGCKLAVVDE 336
Query: 481 SGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
+G+V++ T+ Q K +E L K + H ++ +G S S
Sbjct: 337 NGKVLE-------TVVIYPTAPQNKTKEAKEVLEKLIKKHNISLISVGNGTASRES---- 385
Query: 541 IYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALG 600
I ++E D+ + + +E+ +Y ++++++ P + AV++
Sbjct: 386 -EAFIAGFLKELGEDIKY-------IIVNEAGASVYSAGKLAAEEFPHFDVGARSAVSIA 437
Query: 601 RYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAI 660
R +Q+PLA + + + ++ + +L + V+ D N+VG+D+N A
Sbjct: 438 RRVQDPLAELVKIDPKSIGVGQYQHDMNQRYLNE-----TLVNVVEDCVNKVGVDLNTA- 491
Query: 661 HREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVR 720
+ L++ISG+ A ++ G TRK + LG K F GFLR+
Sbjct: 492 ----SVSLLEYISGINKTIARNIVSYREENGGFKTRKQLLKVPKLGPKSFEQCAGFLRIS 547
Query: 721 RSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
+ LD T +HPESY A+EL K
Sbjct: 548 SGDEP---------LDFTSVHPESYAAAKELLK 571
>gi|86133351|ref|ZP_01051933.1| Transcriptional accessory protein [Polaribacter sp. MED152]
gi|85820214|gb|EAQ41361.1| Transcriptional accessory protein [Polaribacter sp. MED152]
Length = 707
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 121/521 (23%), Positives = 220/521 (42%), Gaps = 76/521 (14%)
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTPDGDSA 319
AS + NS L+GAR + A I+ +R +R A +S+ D
Sbjct: 139 ASKYIKNDVNSIDDALEGARFIIAEWINERTDIRNNIRRELERFATISSKVIKAKKEDEK 198
Query: 320 IDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHY 379
F + W + L + + L I +AE E +++ I++ + L
Sbjct: 199 AQKFKDY--FDW--SESLNRIPSHRLLAILRAENEGFIRIKIEVDSERL--------LQR 246
Query: 380 LSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKV 439
+ + + +S Q EL +KDA L PS+ EA S +A ++ + K L +
Sbjct: 247 IENRIIRSQNECAAQIELAIKDAYKRLLFPSLANEALSNAKEKADESAILVFAKNLKQLL 306
Query: 440 SVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCLTLR 496
P K RVLA PG + V L+S G++ + +F
Sbjct: 307 LGAPLGEK------------RVLAI--DPGFRSGCKVVCLNSQGDLEHNETIFP------ 346
Query: 497 SQNVRDQQSKKNDQERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ Q+KK + + + F+++ H+ + +G S + + I K+ ++P D
Sbjct: 347 ----HEPQNKKLEAIKKISFLVEAHKIEAIAIGNGTAS-----RETEQFIKKIQFKNPVD 397
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
I E+ +Y S+I+ ++ P V+ +V++GR LQ+PLA + +
Sbjct: 398 ---------IFVISEAGASIYSASKIAREEFPNYDVTVRGSVSIGRRLQDPLAELVKIDA 448
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
S + ++ + + ++ + N VG++IN A + L ++SG+
Sbjct: 449 K-----SIGVGQYQHDVDQTKLKKSLDNTVESCVNTVGVNINTASE-----SLLSYVSGI 498
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
GPR A ++ + GA +R D LG K F A GFLR++ L
Sbjct: 499 GPRLAENIIKYRNENGAFISRNDIKKVPRLGGKAFEQAAGFLRIKHGKNP---------L 549
Query: 736 DDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIE 776
D++ +HPESY L ++AK++ N+ +E + + E ++ +E
Sbjct: 550 DNSAVHPESYFLVDKMAKDM-NKKVEEIIGNKELIQQIKLE 589
>gi|219883220|ref|YP_002478382.1| RNA binding S1 domain protein [Cyanothece sp. PCC 7425]
gi|219867345|gb|ACL47683.1| RNA binding S1 domain protein [Cyanothece sp. PCC 7425]
Length = 763
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 125/567 (22%), Positives = 227/567 (40%), Gaps = 114/567 (20%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A+ L P P ++A A
Sbjct: 106 RPKRRTRATIAREKGLEPLANFL-----------------KTLNHPTAVPTDLA--LAAA 146
Query: 269 MF-------NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT---PDGDS 318
+ ++ LQGA + + EI+ + +R Y+R + V++ P+G +
Sbjct: 147 KYIAEAKGVRTATDALQGASDILSEEIADKANLRAYLRDYLLTTGVLNAKVKGGHPEGTT 206
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
+ + + + P++ L + + E E +L V + E ++ +D +
Sbjct: 207 RFEMYRHY-------QAPIKTIPAHNLLALYRGEAEGVLVVELTFDEAAV---LADLESQ 256
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
L +K ++ + R++ L DA L S++ E RS A + + L
Sbjct: 257 ELR---AKQQEVRDFYRQM-LNDAFQRLLKNSLITEVRSAKKVEADLESIRTFEANLREL 312
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRS 497
+ P K PG + V+LD +G+ L
Sbjct: 313 LLAAPAGMKST--------------LAIDPGFRTGCKVVVLDPTGKF----------LEY 348
Query: 498 QNVRDQQSKKNDQ---ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
Q + QS + Q + LLK + +Q ++ +G N + D+ + + +E P
Sbjct: 349 QTIFPHQSVEQRQKAGQTLLKLIDRYQVELIAVG--NGTAGRETDEFVAELLQTLEPKPV 406
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
V +ES +Y S ++ + P Q V+ A+++GR LQ+PLA + +
Sbjct: 407 KV----------MVNESGASIYSASPVAIAEFPEQDITVRGAISIGRRLQDPLAELVKID 456
Query: 614 -----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
G + + KL + +++ + N VG+D+NLA +E
Sbjct: 457 PKSIGVGQYQHDVDQKLLKKK-----------LDETVESCVNYVGVDLNLA-SKEL---- 500
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L F+SG+ P A ++ + GA R+ + LG K F A GFLR+ R+GQ
Sbjct: 501 LTFVSGVTPTIAGNIITYRNQNGAFSNRRQLLQVAKLGPKAFEQAAGFLRI-RNGQ---- 555
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEV 755
+ LD+T +HPE Y L + +A+++
Sbjct: 556 ----NPLDNTAVHPERYNLVETIARDL 578
>gi|384173322|ref|YP_005554699.1| RNA-binding protein [Arcobacter sp. L]
gi|345472932|dbj|BAK74382.1| RNA-binding protein [Arcobacter sp. L]
Length = 703
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 120/522 (22%), Positives = 235/522 (45%), Gaps = 82/522 (15%)
Query: 244 LEKMGDELEDPKETPEEM---ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
LE + + ++ K + +E+ A F + + + GA + A + + ++ +R+
Sbjct: 122 LEPLANIIQSMKYSLDEINQKAKQFLNKEVATIEDAINGASDIIAQRYADDFRTKEVIRN 181
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQ---FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLL 357
I ++ ++ T T +F++ + V + EK ++ + ++L I +A EK L
Sbjct: 182 IVLNYGIIETKKTK-------TFNENGVYVSVANISEK-VKYIKSHRFLAINRAVNEKEL 233
Query: 358 QVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARS 417
V I++ E N + + K++ + S S +L + KD L LLPS+ +EA S
Sbjct: 234 TVKIEVDE---NYILENIKKYKIPASASSSKELVFEAY----KDGLKRLLLPSLKREALS 286
Query: 418 LMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG--PGKPETTF 475
+ +A S + +GK L K+ +TP P V G PG F
Sbjct: 287 ELKEKASSEAITLFGKNL-----------KELLLTP-----PLVNQVILGMDPG-----F 325
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK---NDQERLLKFMMDHQPHVVVLGAVNL 532
V SG + V+ L S + + K+ N + +L+ + ++ + + +G
Sbjct: 326 V----SGCKLAVIDENGNYLASNVIYPTKPKEDFVNSSKVVLELIKKYKINSIAIGNGTA 381
Query: 533 SCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGN 592
S + I K++ E+ DV + + E +Y S+I+ + P
Sbjct: 382 S-----QETAAFISKLINENNLDVKYAV-------VSEIGASVYSASKIAMMEYPNLDVT 429
Query: 593 VKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQV 652
++ A+++ + L++P+A + + P S + ++ + E +E V VD+ N+V
Sbjct: 430 IRGAISIAQRLRDPMAALVKI-DPK----SLGIGQYQHDVNQKELEQKLENVTVDLVNKV 484
Query: 653 GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVN 712
G+DIN A + L FISG+ + A ++ + T+ + + G+G K +
Sbjct: 485 GVDINSA-----SYKLLSFISGISEKLALNIIEHKEKIKNFKTKAELLKVKGIGAKAYEQ 539
Query: 713 AVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+VGFLR+ + G++ +LD+T IHPE+Y + ++L K+
Sbjct: 540 SVGFLRI-KDGKS--------ILDNTAIHPENYDVVEKLQKK 572
>gi|162448175|ref|YP_001621307.1| Tex protein-related transcription accessory protein [Acholeplasma
laidlawii PG-8A]
gi|161986282|gb|ABX81931.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Acholeplasma laidlawii PG-8A]
Length = 724
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 152/673 (22%), Positives = 280/673 (41%), Gaps = 96/673 (14%)
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS-IFMDNAVVSTCP 312
PK E A + +++ L+GA + + IS + RKY+R +F +VS
Sbjct: 133 PKTDVVEEAKKYLNDEVLTTKDALEGAGFIISELISDDANYRKYLRDYLFRHGVLVSNLR 192
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + ++ + + + + K + Q L I +AE+EK++ V + ++++
Sbjct: 193 KNGKELDVKGVYE---IYYDYSQSITKIKPHQILAINRAEDEKVITVKLDGTKEAM---- 245
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
E+YL V K + E +KD+L + PS+ +E RS +S + + + +
Sbjct: 246 ----ENYLIKQVIKKPSNADMYLEEAIKDSLKRLIFPSIEREIRSELSEKGQEQAIEVFA 301
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVD--VLFT 490
L + P + K + + A R C W ++D +G+V++ V++
Sbjct: 302 DNLSKLLLQPPLKGK---VILGIDPAFRT-GCKW---------TVVDQTGQVLEKGVIYP 348
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
T Q R K E LK + ++ + L A+ S + + + + ++++
Sbjct: 349 HETT---QGGRPDPEKVFQAELQLKVL--YKKYKFELVAIGNGTASRETERF--VVEVIK 401
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
D + V +E+ +Y S ++ ++ P + A ++ R LQ+PL+ +
Sbjct: 402 NQNMDAKY-------VIVNEAGASVYSASDVAREEFPDFSVEERSAASIARRLQDPLSEL 454
Query: 611 ATL----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
+ G G+ +I KL NF V+ V NQVG++ N A
Sbjct: 455 VKIDPKSIGVGQYQHDIAPKKLDDSLNF------------VVTQVVNQVGVNANTASK-- 500
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+ L ++SGL A +L + G +R+D + LG K + AVGFLR+ S
Sbjct: 501 ---SLLTYVSGLSKNVAENLVNYRNKIGGFKSREDLLKVPSLGPKTYEQAVGFLRIPESD 557
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPD 783
+ +LD T IHPESY LA+E+ K+ L ++ E +
Sbjct: 558 E---------ILDQTSIHPESYQLAREVMKK----------------LNISSEDIGKPSI 592
Query: 784 LLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT 843
L T +DR ++ + TL LI + +D R+ Y +P + I +
Sbjct: 593 RLWTDNIDREQVARELHTDKYTLDLILDAFVAPMRDPRDDYAQPILKSDVLSI-----ED 647
Query: 844 LAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIK 903
L G ++ TVR V A + G++ S+ + D + G I+T +
Sbjct: 648 LKVGMELEGTVRNVTDFGAFVDVGLKNDGLVHISKLSNKFVKHP-KDVVSVGQIVTVWVL 706
Query: 904 SIQKNRYQVFLVC 916
+I +++ QV L
Sbjct: 707 NIDRDKGQVGLTM 719
>gi|390943875|ref|YP_006407636.1| transcriptional accessory protein [Belliella baltica DSM 15883]
gi|390417303|gb|AFL84881.1| transcriptional accessory protein [Belliella baltica DSM 15883]
Length = 743
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 152/685 (22%), Positives = 267/685 (38%), Gaps = 151/685 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFI+ YRKE SL +EV + AI D ++ L KR
Sbjct: 33 VPFISRYRKEVTGSL------DEVQ------------------VAAIRDRTQQLRDLDKR 68
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ A+ K++ +L + + K + AAET ++D L+ P
Sbjct: 69 REAILKSIKEQ-----------------GKLTEELEKKINAAETMSLLED------LYLP 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK PKR TK + + GL +A+ EQ + L E G ++D KE
Sbjct: 106 ----------YK-PKRRTKATIAKEKGLEPLATLI---FEQQSIDLDAEA-GKYVDDSKE 150
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
P S + LQGAR + A I+ +RK +R +F++ + P
Sbjct: 151 VP-------------SIEEALQGARDIIAEWINENVELRKKMRDLFINEGTFVSKVLPGK 197
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
++ + + W +P++ + L +++ E+E L + PE+ + +
Sbjct: 198 EAEAIKYKDY--FDW--SEPVKTAPSHRVLAMRRGEKELFLMLD-SCPEEL--SAIALME 250
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
+ L D + S + Q L ++D L PSM E R +A + + + L
Sbjct: 251 KMILEDAANTSVE----QVRLAIRDCYKRLLKPSMETEVRLFTKKKADEDAIKVFAENLR 306
Query: 437 NKVSVGPYQRKD-NDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTL 495
+ P K I P + + C GP +F D ++
Sbjct: 307 QLLLAAPLGEKSVMAIDPGFRTGCKTV--CLGPQGQLLSF----------DAIYPN---- 350
Query: 496 RSQNVRDQQSKKNDQERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
+ Q + + +K +++ HQ + +G S + E +
Sbjct: 351 ------EPQRRTAESAATIKHLVEKHQIQAIAIGNGTAS-------------RETEAFVK 391
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
+G + + +ES +Y S ++ ++ P Q V+ AV++GR L +PLA + +
Sbjct: 392 AIGLP-KSVIVTMVNESGASIYSASDVAREEFPDQDLTVRGAVSIGRRLMDPLAELVKID 450
Query: 614 ---CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
G G+ L+N L + ++ N VG++IN A + L
Sbjct: 451 AKSIGVGQYQHDVDQAALKNSL---------DDTVMSCVNGVGVEINTASKQ-----LLT 496
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
++SGLGP A ++ G +R + LG+K + A GFLR+R +
Sbjct: 497 YVSGLGPVLAQNIVAYRTENGPFKSRSEIKKVPRLGEKAYEQAAGFLRIRNAKNP----- 551
Query: 731 FIDLLDDTRIHPESYGLAQELAKEV 755
LD + +HPE Y L +++AK++
Sbjct: 552 ----LDSSAVHPERYELVEKMAKDI 572
>gi|86140955|ref|ZP_01059514.1| putative RNA binding protein with S1 RNA-binding domain
[Leeuwenhoekiella blandensis MED217]
gi|85832897|gb|EAQ51346.1| putative RNA binding protein with S1 RNA-binding domain
[Leeuwenhoekiella blandensis MED217]
Length = 711
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 211/506 (41%), Gaps = 87/506 (17%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT---PD 315
E+ A F S + L+GARH+ A ++ VR Y+R+ A +++ D
Sbjct: 137 EQAAGRFLNNEVASIEEALEGARHIIAEWVNERSDVRNYLRNQIERYAQITSRVVKSKKD 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+ A+ F W E+ L + ++L + +A +E V +KL D+ L
Sbjct: 197 DEKALKYKDYF---DW--EEALNRIPSHRFLALSRAADEGF--VRLKLDIDTCRAL---- 245
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
++++ + KS + EL + DA L P++ EA S +A + + + K L
Sbjct: 246 --AHIANRMIKSRGDCAEHIELAIADAYKRLLFPALSNEALSTAKEKADAEAISVFAKNL 303
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ P K R+LA PG + V LD +G
Sbjct: 304 RQLLLGSPLGEK------------RILAI--DPGFRTGCKVVCLDENG-----------G 338
Query: 495 LRSQNVRDQQSKKNDQE---RLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
L+ KND + R + F++D H+ + +G S + + I +M
Sbjct: 339 LQHNETIYPHPPKNDTKGAMRKISFLVDAHKIEAIAIGNGTAS-----RETEQFIKRM-- 391
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
+ RD L + E+ +Y S+I+ D+ P V+ AV++GR L +PLA +
Sbjct: 392 QFNRD-------LEVFVVSEAGASIYSASKIARDEFPNYDVTVRGAVSIGRRLADPLAEL 444
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L+N L ++V+ N VG++IN A
Sbjct: 445 VKIDAKSIGVGQYQHDVDQTKLKNEL---------DRVVESCVNTVGVNINTA-----SI 490
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
L ++SG+GP+ A ++ GA +RK+ + LG K + A GFLR++ +
Sbjct: 491 PLLSYVSGIGPKLAENIVTYRDENGAFASRKEILNVPRLGAKAYEQAAGFLRIKNAENP- 549
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELA 752
LDD+ +HPE Y L +++A
Sbjct: 550 --------LDDSAVHPERYALVEKMA 567
>gi|423249718|ref|ZP_17230734.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL03T00C08]
gi|423255219|ref|ZP_17236148.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL03T12C07]
gi|392652219|gb|EIY45880.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL03T12C07]
gi|392655803|gb|EIY49445.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL03T00C08]
Length = 707
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 222/558 (39%), Gaps = 106/558 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQ-LGLQLSLEKMGDELEDPKETPEEMASNFKC 267
+PKR T+ + + GL +A E LG ++ GD
Sbjct: 106 KPKRKTRAEAARQKGLEPLALLLMMQRENNLGSRIPAFVKGD------------------ 147
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFA 327
++ L+GAR + A ++S + R VR++F AV+S D + +
Sbjct: 148 --VKDAEDALKGARDIIAEQVSEDERARNAVRNLFARQAVISAKVVKGKDEEAAKYRDY- 204
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ PL++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 205 ---FDFSSPLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDD------ECLER-LDRQFVRS 253
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
Q ++DA L PS+ E SL +A + + + L + P +K
Sbjct: 254 NNECGRQVAEAVQDAYRRLLKPSIETEFASLSKEQADDEAIRVFAENLRQLLLAPPLGQK 313
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ--- 503
RV+ PG + V LD+ G +V ++N+
Sbjct: 314 ------------RVMGI--DPGFRTGCKVVCLDAQGNLV----------HNENIYPHPPV 349
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE- 562
K +L K + ++ + +G S E V H+ +
Sbjct: 350 DKKTEAASKLRKMIEAYKIEAIAIGNGTAS----------------RETENFVTHQQFDR 393
Query: 563 -LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
+ + E +Y S+ + D+ P V+ AV++ R L +PLA + + G G
Sbjct: 394 PVQVFVVSEQGASIYSASKTARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVG 453
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ L+ L +Q + + NQVG+++N A L +ISGLGP
Sbjct: 454 QYQHDVDQAKLKKSL---------DQTVENCVNQVGVNLNTASSH-----LLTYISGLGP 499
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
+ A ++ GA +RK+ + +G K F GFLR+ G+ + LD+
Sbjct: 500 QLAQNIVAYRAANGAFASRKELMKVPRMGAKAFEQCAGFLRI-AGGE--------NPLDN 550
Query: 738 TRIHPESYGLAQELAKEV 755
T +HPESYG+ Q++AK++
Sbjct: 551 TAVHPESYGIVQQMAKDL 568
>gi|326389632|ref|ZP_08211198.1| Tex-like protein [Thermoanaerobacter ethanolicus JW 200]
gi|325994347|gb|EGD52773.1| Tex-like protein [Thermoanaerobacter ethanolicus JW 200]
Length = 712
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 181/850 (21%), Positives = 351/850 (41%), Gaps = 184/850 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N ++ L + +L++K
Sbjct: 32 IPFIARYRKEATGSLSDEVLRN-----------------FYDRLTYLRNLEEK------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++++ R+ DE +L + I +E A T +EV+D+ F
Sbjct: 68 ------------KQDTIRLIDE-----QGKLTEEIKAKIENATTLQEVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A K S+E GD
Sbjct: 106 ------------RPKRRTRATIAKEKGLEPLA-KVISSNEVTD--------GD------- 137
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A + + + QGA + A +IS + +RKY+RS +N ++ T
Sbjct: 138 -VEEYAKPYLNENVPTVEEAYQGAMDIIAEDISDDADIRKYIRSFTWNNGIIVTQALKQE 196
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDC 375
S + ++ + ++ ++ + L I +AE EK + V I++ E +N+L
Sbjct: 197 RSPYEMYYDY-------KEAVKTIPPHRILAINRAEREKYISVKIEIDSERIINRL---- 245
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ V+K A ++ + + ++D+ + PS+ +E R+ ++ +A+ ++ + + L
Sbjct: 246 ----IESKVNK-ASIFAEYYKKAIEDSYKRLIAPSIEREIRNTLTEKAEEKAIIVFKENL 300
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ + P + + + P + ++D +G+++D T +
Sbjct: 301 KSLLLQPPIKGH--------------VVMGFDPAYRTGCKIAIVDETGKLLD---TATIY 343
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
+ SKK +E + K+ V L A+ S + +++ I ++++E R
Sbjct: 344 PTPPQNDFENSKKVLKELIEKYN-------VTLIALGNGTASRESEMF--IAELIKELSR 394
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
+V + V +E+ +Y S I +++ P +++ A++L R LQ+PLA + +
Sbjct: 395 EVKY-------VIVNEAGASVYSASPIGTEEFPDINVSLRGAISLARRLQDPLAELVKID 447
Query: 614 ---CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G+ ++ KL D G++E D N VG+D+N A +
Sbjct: 448 PKSIGVGQYQHDVDQKKLG--------DALNGVVE----DCVNSVGVDLNTA-----SVS 490
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L+++SG+ A ++ + G R+ LG+ F GFLR+
Sbjct: 491 LLKYVSGINAAIAKNIVEYRNQIGKFTNREQLKNVKRLGEATFTQCAGFLRILDGD---- 546
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
++ D T +HPE Y ++L K+ Y ++ ++ + ++D + L+
Sbjct: 547 -----NIFDSTAVHPERYETLEKLLKKFGYEKE------------KLDRKKLKDFANSLE 589
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
Y L+R +E + TLY I EL +D R +P + I + L
Sbjct: 590 EYGLERISEE--YDIGLPTLYDIVSELKKPGRDPREDLPKPILRSDVMTI-----NELKP 642
Query: 847 GRVVQATVRRVQGQRAICVLESGLA--GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
G + TVR V C ++ G+ G++ + S ++ L D + GDI+ ++ S
Sbjct: 643 GMELMGTVRNVTDFG--CFVDIGVHTDGLVHFSEMSQNYIKHPL-DVVSVGDIVKVRVLS 699
Query: 905 IQKNRYQVFL 914
+ R ++ L
Sbjct: 700 VDIERNRISL 709
>gi|265763188|ref|ZP_06091756.1| RNA-binding protein [Bacteroides sp. 2_1_16]
gi|375358137|ref|YP_005110909.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|383118045|ref|ZP_09938788.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides sp. 3_2_5]
gi|423268319|ref|ZP_17247291.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL05T00C42]
gi|423274227|ref|ZP_17253174.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL05T12C13]
gi|251944328|gb|EES84817.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides sp. 3_2_5]
gi|263255796|gb|EEZ27142.1| RNA-binding protein [Bacteroides sp. 2_1_16]
gi|301162818|emb|CBW22365.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|392704287|gb|EIY97424.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL05T00C42]
gi|392705872|gb|EIY98998.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides fragilis CL05T12C13]
Length = 707
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 222/558 (39%), Gaps = 106/558 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQ-LGLQLSLEKMGDELEDPKETPEEMASNFKC 267
+PKR T+ + + GL +A E LG ++ GD
Sbjct: 106 KPKRKTRAEAARQKGLEPLALLLMMQRENNLGSRIPAFVKGD------------------ 147
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFA 327
++ L+GAR + A ++S + R VR++F AV+S D + +
Sbjct: 148 --VKDAEDALKGARDIIAEQVSEDERARNAVRNLFARQAVISAKVVKGKDEEAAKYRDY- 204
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ PL++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 205 ---FDFSSPLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDD------ECLER-LDRQFVRS 253
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
Q ++DA L PS+ E SL +A + + + L + P +K
Sbjct: 254 NNECGRQVAEAVQDAYRRLLKPSIETEFASLSKEQADDEAIRVFAENLRQLLLAPPLGQK 313
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ--- 503
RV+ PG + V LD+ G +V ++N+
Sbjct: 314 ------------RVMGI--DPGFRTGCKVVCLDAQGNLV----------HNENIYPHPPV 349
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE- 562
K +L K + ++ + +G S E V H+ +
Sbjct: 350 DKKTEAASKLRKMIEAYKIEAIAIGNGTAS----------------RETENFVTHQQFDR 393
Query: 563 -LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
+ + E +Y S+ + D+ P V+ AV++ R L +PLA + + G G
Sbjct: 394 PVQVFVVSEQGASIYSASKTARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVG 453
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ L+ L +Q + + NQVG+++N A L +ISGLGP
Sbjct: 454 QYQHDVDQTKLKKSL---------DQTVENCVNQVGVNLNTASSH-----LLTYISGLGP 499
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
+ A ++ GA +RK+ + +G K F GFLR+ G+ + LD+
Sbjct: 500 QLAQNIVAYRAANGAFASRKELMKVPRMGAKAFEQCAGFLRI-AGGE--------NPLDN 550
Query: 738 TRIHPESYGLAQELAKEV 755
T +HPESYG+ Q++AK++
Sbjct: 551 TAVHPESYGIVQQMAKDL 568
>gi|53713095|ref|YP_099087.1| RNA-binding protein [Bacteroides fragilis YCH46]
gi|52215960|dbj|BAD48553.1| putative RNA binding protein with S1 RNA-binding domain
[Bacteroides fragilis YCH46]
Length = 707
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 222/558 (39%), Gaps = 106/558 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQ-LGLQLSLEKMGDELEDPKETPEEMASNFKC 267
+PKR T+ + + GL +A E LG ++ GD
Sbjct: 106 KPKRKTRAEAARQKGLEPLALLLMMQRENNLGPRIPAFVKGD------------------ 147
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFA 327
++ L+GAR + A ++S + R VR++F AV+S D + +
Sbjct: 148 --VKDAEDALKGARDIIAEQVSEDERARNAVRNLFARQAVISAKVVKGKDEEAAKYRDY- 204
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ PL++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 205 ---FDFSSPLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDD------ECLER-LDRQFVRS 253
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
Q ++DA L PS+ E SL +A + + + L + P +K
Sbjct: 254 NNECGRQVAEAVQDAYRRLLKPSIETEFASLSKEQADDEAIRVFAENLRQLLLAPPLGQK 313
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ--- 503
RV+ PG + V LD+ G +V ++N+
Sbjct: 314 ------------RVMGI--DPGFRTGCKVVCLDAQGNLV----------HNENIYPHPPV 349
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE- 562
K +L K + ++ + +G S E V H+ +
Sbjct: 350 DKKTEAASKLRKMIEAYKIEAIAIGNGTAS----------------RETENFVTHQQFDR 393
Query: 563 -LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
+ + E +Y S+ + D+ P V+ AV++ R L +PLA + + G G
Sbjct: 394 PVQVFVVSEQGASIYSASKTARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVG 453
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ L+ L +Q + + NQVG+++N A L +ISGLGP
Sbjct: 454 QYQHDVDQAKLKKSL---------DQTVENCVNQVGVNLNTASSH-----LLTYISGLGP 499
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
+ A ++ GA +RK+ + +G K F GFLR+ G+ + LD+
Sbjct: 500 QLAQNIVAYRAANGAFASRKELMKVPRMGAKAFEQCAGFLRI-AGGE--------NPLDN 550
Query: 738 TRIHPESYGLAQELAKEV 755
T +HPESYG+ Q++AK++
Sbjct: 551 TAVHPESYGIVQQMAKDL 568
>gi|386002501|ref|YP_005920800.1| RNA binding S1 domain-containing protein [Methanosaeta harundinacea
6Ac]
gi|357210557|gb|AET65177.1| RNA binding S1 domain protein [Methanosaeta harundinacea 6Ac]
Length = 735
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 188/866 (21%), Positives = 331/866 (38%), Gaps = 171/866 (19%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
G +L + + L LL K IPFIA YRKE L +EV
Sbjct: 20 GRELGLREKQVHAALALLEDGK-TIPFIARYRKEATGGL------DEV------------ 60
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
L A+ D + L +R+S++ ++R + L + +
Sbjct: 61 ------ALAAVRDRAELIRELDRRRSSILRSLRER-----------------EVLTEELE 97
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK-F 231
K + A T ++D+ L F RPKR T+ S + GL +A + F
Sbjct: 98 KRILEAPTIAVLEDLYLPF-----------------RPKRRTRASVARERGLLPLADRIF 140
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
G + + + DP+ S L GAR + A IS +
Sbjct: 141 DQGEIDPGAEAA------KFLDPERE------------VGSVDEALAGARDIIAERISED 182
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKA 351
P R +R +F+ ++ + + + + +A + L K + + I +
Sbjct: 183 PGARSRIRDLFLREGILRSKVSGPLEGEGSKYRDYADCSEI----LSKAPSHRVMAILRG 238
Query: 352 EEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
++E L + ++ P++ + G + A D+ L+D L PSM
Sbjct: 239 KKEGFLTLHVEPPQEKATAILELLFLRRRRRGPASPA---TDEVRSALEDGYKRLLAPSM 295
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-K 470
+E+ S RA + + + L + + P + PG +
Sbjct: 296 ERESLSAARERAMERAIGVFAENLRHLLLEPPLGERT--------------VMAIDPGFR 341
Query: 471 PETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG 528
V+LD SG ++ +V+F ++ + + ++L + +G
Sbjct: 342 TGCKVVILDRSGSLLAKEVIFPHP---------PPRAVQEAERKILDLCERFGVEFIAVG 392
Query: 529 AVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPG 588
+ T+ ++ EE R +G D + IV DE+ +Y SR + ++ P
Sbjct: 393 ----NGTAGRE---------TEEFLRGLGIPGD-VPIVMVDEAGASVYSTSRAAREEFPE 438
Query: 589 QKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDV 648
+ ++ A+++GR LQ+PLA + + + ++ E L K + E V + V
Sbjct: 439 EDATIRSAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDEKAL----KMKLDEVVEISV 494
Query: 649 TNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKK 708
N VG+D+N A L ++GLGP+ A S+ G TR++ GLG +
Sbjct: 495 -NAVGVDLNTA-----SIELLSRVAGLGPKLARSIVLYREENGPFRTREELKKVPGLGPR 548
Query: 709 VFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDE 768
F A GFLR+R D LD + +HPES G+ + +A GDL
Sbjct: 549 AFEQAAGFLRIRGGD---------DPLDGSAVHPESSGIVEAMA---------GDLGATV 590
Query: 769 DALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPS 828
+ L +RD P L + +R++ EK T+ I EL +D R ++
Sbjct: 591 EDL------IRD-PHLQERIEAERYVTEKA---GLPTIRDILAELAKPGRDPRREF---- 636
Query: 829 QDEEFYMISGETE-DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDW-RDS 886
E F G T+ + L G + TV V A + G++ K + +D + RD
Sbjct: 637 --ELFSFAPGVTKIEDLRPGMSLPGTVTNVAAFGAFVDVGVHQDGLVHKSELADRFVRDP 694
Query: 887 ELSDKLHEGDILTCKIKSIQKNRYQV 912
++H+ +T +++ R +
Sbjct: 695 AEVVRVHQKVEVTVLKVDLERKRISL 720
>gi|225572946|ref|ZP_03781701.1| hypothetical protein RUMHYD_01137 [Blautia hydrogenotrophica DSM
10507]
gi|225039692|gb|EEG49938.1| Tex-like protein N-terminal domain protein [Blautia
hydrogenotrophica DSM 10507]
Length = 717
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 120/553 (21%), Positives = 234/553 (42%), Gaps = 97/553 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + GL +A+ + + L+ E+ L + KE
Sbjct: 105 RPKRRTRAIIAKEKGLEPLANLIRLQATSVPLE---EEAKAYLSEEKE------------ 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN-AVVSTCPTPDGDSAIDSFHQFA 327
+ Q + GA + A IS E R ++R++ + +VVS + S DS++ +
Sbjct: 150 -VRTPQEAIAGAMDIIAESISDEANYRMHIRNVTVKKGSVVSVAKDSEAQSVYDSYYDY- 207
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVS-K 386
E+P+ K + L + + E+EK L V I PE+ + + YL V K
Sbjct: 208 ------EEPVSKIAGHRVLALNRGEKEKFLTVKISAPEEEILR--------YLKKKVILK 253
Query: 387 SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR 446
+ E+ ++DA + P++ +E R+ ++ +A+ + +GK L + P
Sbjct: 254 ENPITTPVLEVAVEDAYKRLIAPAIEREVRNDLTEKAEEASIGVFGKNLQQLLMQPPIVG 313
Query: 447 KDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQ 503
+ + W P + ++DS+G+V+D V++ T ++
Sbjct: 314 R--------------VVLGWDPAFRTGCKLAVVDSTGKVLDTTVIYPTAPT-------NE 352
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDEL 563
+ + ++++ +++ + ++ +G S S +++ +M++E P ++
Sbjct: 353 KKIRAAKDKVKEWIETYGISLISIGNGTASRES-----EQVVVEMLKEIPE------KKV 401
Query: 564 SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGRE 619
V +E+ +Y S++++++ P + A ++ R LQ+PLA + + G G+
Sbjct: 402 QYVITNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLAELVKIDPKSIGVGQY 461
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP-LQFISGLGPR 678
L L G++E D N+VG+D+N A AP L++ISG+
Sbjct: 462 QHDMNQKKLGEALN-----GVVE----DCVNKVGVDLNTA------SAPLLEYISGISKV 506
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ G+ R++ + LG K + GF R+ LD T
Sbjct: 507 IAKNIVAYREENGSFRNRRELLKVAKLGPKAYEQCAGFTRILGGDNP---------LDAT 557
Query: 739 RIHPESYGLAQEL 751
+HPESY A +L
Sbjct: 558 SVHPESYEAATKL 570
>gi|329964008|ref|ZP_08301262.1| Tex-like protein [Bacteroides fluxus YIT 12057]
gi|328526431|gb|EGF53445.1| Tex-like protein [Bacteroides fluxus YIT 12057]
Length = 711
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 124/551 (22%), Positives = 228/551 (41%), Gaps = 92/551 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L L++ +P PE A+++
Sbjct: 107 KPKRKTRAEAARQKGL-----------EPLATLLMLQR------EPH--PESRAADYVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ L+GAR + A +S + R VR+ F V++ + + +
Sbjct: 148 DVKDVEDALKGARDIIAEHVSEDERARNSVRNSFARQGVLTAKVVKGKEEEAAKYRDYFD 207
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ L++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 208 CS----ESLKRCSSHRLLAIRRAEAEGLLKVSIS-PDDE------ECLER-LERQFVRSG 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
Q + ++DA L PS+ E +L RA + + + L + P +K
Sbjct: 256 NACGQQVQEAVQDAYKRLLKPSIETEFAALSKERADEEAIKVFAENLRQLLLASPLGQK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + V LD+ G + L ++N+
Sbjct: 315 -----------RVMG--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVS 351
Query: 508 NDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
+E +L K + ++ + +G N + + +D F + R E+
Sbjct: 352 KGKEAFSKLQKMIEAYKIDAIAIG--NGTASRETED-----FLKRQSFNR-------EVQ 397
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
+ E +Y S+I+ D+ P V+ AV++GR L +PLA + + + S
Sbjct: 398 VFIVSEQGASIYSASKIARDEFPEYDVTVRGAVSIGRRLMDPLAELVKI-----DPKSIG 452
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+ ++ + + ++Q + + NQVG+++N A L +ISGLGP+ A ++
Sbjct: 453 VGQYQHDVDQGKLKKSLDQTVENCVNQVGVNLNTASSH-----LLTYISGLGPQLAQNIV 507
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
GA +RK+ + +G K F GFLR+ + LD+T +HPES
Sbjct: 508 NYRAENGAFASRKELMKVPRMGAKAFEQCAGFLRIPDAKNP---------LDNTAVHPES 558
Query: 745 YGLAQELAKEV 755
Y + +++A+++
Sbjct: 559 YCIVEQMAQDL 569
>gi|332710577|ref|ZP_08430522.1| transcriptional accessory protein [Moorea producens 3L]
gi|332350632|gb|EGJ30227.1| transcriptional accessory protein [Moorea producens 3L]
Length = 720
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 151/715 (21%), Positives = 279/715 (39%), Gaps = 157/715 (21%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+LS+S I L L + IPFIA YRKE SL D+ +
Sbjct: 9 AQELSLSATQIENALSLFA-EGATIPFIARYRKEVTGSL--------------DEVQLRT 53
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
+ H L L++RKS + + +A +L D +
Sbjct: 54 IAERHTYLTE----------LEQRKSVILN-----------------AIASAGKLTDELK 86
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS--K 230
+EA + + E++D+ L + +PKR T+ + + GL +A +
Sbjct: 87 AKIEACQQKTELEDLYLPY-----------------KPKRRTRATMAREKGLEPLADWIE 129
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+ E + LS +E + ++ + K N+ + VLQGA + A ++
Sbjct: 130 SMNTPEVKSVSLS-----------EEAAKYISPDHK---LNTVEDVLQGASDILAEAVAE 175
Query: 291 EPCVRKYVRSIFMDNAV-VSTCPT--PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL 347
+ +R Y+R FM + V VS P+G + + + +F + P++ L
Sbjct: 176 KADLRAYLRDYFMKSGVFVSRIKKDYPEGTTKFEMYREF-------QIPVKSVAPHNMLA 228
Query: 348 IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
+ + E E +L++ + ED + S+ + A L + + +LKD + +
Sbjct: 229 LLRGEAEGVLKLELSFDEDYVMSYLE-------SEEIYTKATLLREFYQTMLKDGFNRLM 281
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
S+ E RS A + + + L + P K P P C
Sbjct: 282 KTSLTTEVRSDRKTYADAESIKTFEANLRELLLSPPAGMK-----PTLAIDPGFRTGC-- 334
Query: 468 PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD-HQPHVVV 526
+LD + + + + + R+Q +K +K +++ +Q ++
Sbjct: 335 ------KVAILDETAKYIT--YQPVFPHQGSQKREQAAKT------IKHLIETYQIELIA 380
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQL 586
+G N + + D+ + K +E P V +ES +Y S ++ ++
Sbjct: 381 IG--NGTASRETDEFISEVLKTMERKPIKV----------MVNESGASIYSASDLAREEF 428
Query: 587 PGQKGNVKRAVALGRYLQNPLAMVATL------CGPGREILSWKLCPLENFLTPDEKYGM 640
P V+ A+++GR LQ+PLA + + G + + KL +
Sbjct: 429 PDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKK----------- 477
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFV 700
++ + N VG+D+N A Q L F+SG+ P A ++ + GA R++ +
Sbjct: 478 LDDTVESCVNYVGVDLNTA---SAQL--LTFVSGISPTIANNIVTYRNQQGAFKNRREIL 532
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LG K F + GFLR+R LD+T +HPESY + + +A ++
Sbjct: 533 KVPKLGPKAFEQSAGFLRIRNGDNP---------LDNTAVHPESYPVVKAIASDL 578
>gi|405982925|ref|ZP_11041236.1| competence protein ComEA helix-hairpin-helix repeat region [Slackia
piriformis YIT 12062]
gi|404389634|gb|EJZ84710.1| competence protein ComEA helix-hairpin-helix repeat region [Slackia
piriformis YIT 12062]
Length = 716
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 163/711 (22%), Positives = 295/711 (41%), Gaps = 159/711 (22%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSL----LKDLEQNEVNNDNNDDF 108
+LS+S I + L+ + IPFIA YRKE L L+ LE
Sbjct: 9 AQELSVSPAQIESVIKLID-EGSTIPFIARYRKEATGGLDDTQLRTLE------------ 55
Query: 109 ERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF 168
ER L+ L+ RK+ + + EE ++ DE R
Sbjct: 56 ERLTYLRN----------------LEARKAEILNSI-----EEQGKLTDELR-------- 86
Query: 169 DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVA 228
S+E A + V+D+ F + KR+T+ S +AGL +A
Sbjct: 87 ----ASIEGATVMQRVEDLYKPF-----------------KKKRATRASKAREAGLEPLA 125
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM--FNSSQAVLQGARHMAAV 286
L L+ + G ++ E A+ F A F +++A LQGA+ + A
Sbjct: 126 D----------LILTQARTG-------KSALETAAAFVDAEGGFATAEAALQGAKDIVAE 168
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGD--SAIDSFHQFAGVKWLREKPLRKFEDAQ 344
I+ + +R+ A ++ T DG+ S + ++ F+ + ++ + +
Sbjct: 169 VIADDAEHTAALRAFTKKTATMAVEAT-DGEEKSVYEPYYDFS-------ESAQRIPNHR 220
Query: 345 WLLIQKAEEEKLLQVTIKLPEDS-LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
L I + E+E L+V ++ +D+ +++L H +GV + + + + D+
Sbjct: 221 VLAINRGEKEGKLRVRVRTDQDAAIDQLGRRIVRH---NGV------FAEALDEAIADSY 271
Query: 404 DNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLA 463
+ PS+ +E RS ++ RA++ + + K + + P + R++A
Sbjct: 272 KRLIAPSLERELRSELTERAQADAIRVFAKNTESLLQQRPVK------------GARIIA 319
Query: 464 CCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQP 522
PG + +LD G+++D +T + RD + K + L+K H+
Sbjct: 320 --LDPGYRTGCKVAVLDEFGKLLD--YTTVYPTPPR--RDIEGTKRTLDSLVK---RHRI 370
Query: 523 HVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRIS 582
+ +V+G N + + +++ + EL +E+ +Y S+++
Sbjct: 371 NTIVIG--NGTASRETEEVVSGF----------IAQSSAELRYTIVNEAGASVYSASKLA 418
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIE 642
S++ P + A++LGR LQ+PLA + + P + I + ++ L E +
Sbjct: 419 SEEYPDLDVTTRGAMSLGRRLQDPLAELVKI--PPQSI---GVGQYQHDLNQAELGRALG 473
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTA 702
V+ V N+VG+D+N A + L ++SG+ P A ++ GA RK
Sbjct: 474 DVVERVVNRVGVDLNTA-----SASLLGYVSGISPAVAKNIVVYREENGAFTDRKQLKNV 528
Query: 703 HGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
LG K F+N GFLR+ S + LD T +HPESY +A EL K
Sbjct: 529 PKLGPKAFLNCAGFLRI---------SDGANPLDATSVHPESYAIATELLK 570
>gi|345016986|ref|YP_004819339.1| Tex-like protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032329|gb|AEM78055.1| LOW QUALITY PROTEIN: Tex-like protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 712
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 178/850 (20%), Positives = 350/850 (41%), Gaps = 184/850 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N ++ L + +L++K
Sbjct: 32 IPFIARYRKEATGSLSDEVLRN-----------------FYDRLTYLRNLEEK------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++++ R+ DE +L + I +E A T +EV+D+ F
Sbjct: 68 ------------KQDTIRLIDE-----QGKLTEEIKAKIENATTLQEVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A K S+E GD
Sbjct: 106 ------------RPKRRTRATIAKEKGLEPLA-KVISSNEVTD--------GD------- 137
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A + + + QGA + A +IS + +RKY+RS +N ++ T +
Sbjct: 138 -VEEYAKPYLNENVPTVEEAYQGAMDIIAEDISDDADIRKYIRSFTWNNGIIVTQALKEE 196
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDC 375
S + ++ + ++ ++ + L I +AE EK + V I++ E +N+L
Sbjct: 197 RSPYEMYYDY-------KEAVKTIPPHRILAINRAEREKYISVKIEIDSERIINRL---- 245
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ V+K A ++ + + ++D+ + PS+ +E R+ ++ +A+ ++ + + L
Sbjct: 246 ----IESKVNK-ASIFAEYYKKAIEDSYKRLIAPSIEREIRNALTEKAEEKAIIVFKENL 300
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ + P + + + P + ++D +G+++D T
Sbjct: 301 KSLLLQPPIKGH--------------VVMGFDPAYRTGCKIAVVDETGKLLD-------T 339
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
Q +N ++ L + + + ++ LG S + +++ I ++++E R
Sbjct: 340 ATVYPTPPQNDFENSKKVLKELIEKYNVTLIALGN---GTASRESEMF--IAELIKELSR 394
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
+V + V +E+ +Y S I +++ P +++ A++L R LQ+PLA + +
Sbjct: 395 EVKY-------VIVNEAGASVYSASPIGTEEFPDINVSLRGAISLARRLQDPLAELVKID 447
Query: 614 ---CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G+ ++ KL D G++E D N VG+D+N A +
Sbjct: 448 PKSIGVGQYQHDVDQKKLG--------DALNGVVE----DCVNSVGVDLNTA-----SVS 490
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L+++SG+ A ++ + G R+ LG+ F GFLR+
Sbjct: 491 LLKYVSGINAAIAKNIVEYRNQIGKFTNREQLKNVKRLGEATFTQCAGFLRILDGD---- 546
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
++ D T +HPE Y ++L K+ Y ++ ++ + ++D + L+
Sbjct: 547 -----NIFDSTAVHPERYETLEKLLKKFGYEKE------------KLDRKKLKDFANSLE 589
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
Y L+R +E + TLY I EL +D R +P + I + L
Sbjct: 590 EYGLERISEE--YDIGLPTLYDIVSELKKPGRDPREDLPKPILRSDVMTI-----NELKP 642
Query: 847 GRVVQATVRRVQGQRAICVLESGLA--GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
G + TVR V C ++ G+ G++ + S + L D + GDI+ ++ S
Sbjct: 643 GMELMGTVRNVTDFG--CFVDIGVHTDGLVHISEMSQGYIKHPL-DVVSVGDIVKVRVLS 699
Query: 905 IQKNRYQVFL 914
+ R ++ L
Sbjct: 700 VDIERNRISL 709
>gi|210620543|ref|ZP_03292091.1| hypothetical protein CLOHIR_00034 [Clostridium hiranonis DSM 13275]
gi|210155257|gb|EEA86263.1| hypothetical protein CLOHIR_00034 [Clostridium hiranonis DSM 13275]
Length = 712
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 147/691 (21%), Positives = 283/691 (40%), Gaps = 172/691 (24%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE+ + T ++H+ L + +L+ +
Sbjct: 31 IPFIARYRKEKT-----------------GEMSDTVLRQFHEKLVYLRNLESR------- 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+E+ R+ DE +L ISK++E A T +EV+DV +
Sbjct: 67 ------------KEDVIRLIDE-----QGKLTKEISKAVEKANTLQEVEDV-------YA 102
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK--FGYSSEQLGLQLSLEKMGDELEDP 254
P +K+ KR T+ S + GL + A + +G + + GL K DE +D
Sbjct: 103 P---------FKKKKR-TRASIAKEKGLEKPALEIMYGKTDDVDGLA---SKYIDEEKDL 149
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
K S + VL+G + A +S + VRKY+R + V + +
Sbjct: 150 K----------------SVEDVLKGVNDIIAEIVSDDAEVRKYLRENARNRGRVVSKGSS 193
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
D + + ++ ++ +P++ + L + + E EK+L+V I++ ++
Sbjct: 194 DEKTVYEMYYDYS-------EPVKYIAPHRILAVNRGENEKILKVKIEIDDE-------- 238
Query: 375 CKEHYLSDGVSK--SAQLWNDQRELI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
Y+ + + + +L RE++ ++DA + P++ +E R+ ++ + + +
Sbjct: 239 ----YVKGWIERRYTKKLSGKCREIVVEAIEDAYKRLIFPAIEREIRNELTEKGQERAIS 294
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD-- 486
+GK L + + P K+ + PG + ++D +G+ +D
Sbjct: 295 VFGKNLNSLLLQPPIHGKN--------------VMGFDPGIRTGCKIAVVDRNGKFLDSA 340
Query: 487 -VLFTGCLTLRSQNVRDQQSKKNDQER-LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEI 544
V TG Q+KK++ E+ L+ + H ++ +G S S
Sbjct: 341 VVFVTGS-----------QAKKSEAEKELIGLIKKHNIDIIAIGNGTASRES-----EAF 384
Query: 545 IFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQ 604
+ KM++++ DV + V E+ +Y S +++ + P +++ A+++ R +Q
Sbjct: 385 VAKMIKDNNLDVKY-------VIVSEAGASVYSASELAAKEHPDINVSIRGAISIARRIQ 437
Query: 605 NPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAI 660
+PLA + + G G+ LE L G++E D N VG D+N A
Sbjct: 438 DPLAELIKIDPKSIGVGQYQHDINGKRLEEVLD-----GVVE----DAVNSVGADLNTA- 487
Query: 661 HREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVR 720
+ L+ ++G+ A ++ G +R + LG K F GFLR+
Sbjct: 488 ----SASLLEHVAGISSAVAKNIVAYREENGEFKSRSEIKKVSKLGPKAFTQCAGFLRIP 543
Query: 721 RSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
+ LD+T +HPESY +++
Sbjct: 544 EAKNP---------LDNTGVHPESYATCEKM 565
>gi|189466315|ref|ZP_03015100.1| hypothetical protein BACINT_02689 [Bacteroides intestinalis DSM
17393]
gi|189434579|gb|EDV03564.1| Tex-like protein N-terminal domain protein [Bacteroides
intestinalis DSM 17393]
Length = 708
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 127/555 (22%), Positives = 219/555 (39%), Gaps = 100/555 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + GL E L L L++ + PE+ A +
Sbjct: 107 KPKRRTRAEVARQKGL-----------EPLATLLMLQR--------EPNPEKRAETYVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
++ L+GAR + A ++S + R VR F AV++ +S D + +
Sbjct: 148 EVKDAEDALKGARDIIAEQVSEDEQARNTVRFAFSRQAVITAKVVKGKESEADKYRDY-- 205
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ KPL+K Q L I++AE E LL+V+I P+D +C E L +S
Sbjct: 206 --FEFSKPLKKCTSHQLLAIRRAEAEGLLKVSIS-PDDE------ECVER-LERRFVRSN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+Q ++DA L S+ E + +A + + + L + P +K
Sbjct: 256 NACGEQVAEAVQDAYKRLLKSSIETEFAAQSKEQADEEAIRVFVQNLRQLLLASPLGQK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + V LD+ G + L ++N+
Sbjct: 315 -----------RVMGI--DPGFRTGCKVVCLDAQGNL----------LHNENIYPHAPVY 351
Query: 508 NDQERLLKFM-MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM--DELS 564
E + K M H+ + N + + ++ + H+ E+
Sbjct: 352 KTTEAVSKIQKMIEAYHIEAIAVGNGTASRETEEFLK--------------HQTFRQEIQ 397
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREI 620
+ E +Y S+I+ D+ P V+ AV++ R L +PLA + + G G+
Sbjct: 398 VFVVSEQGASIYSASKIARDEFPEYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVGQYQ 457
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
L+ L + + N VG+++N A L +ISGLGP+ A
Sbjct: 458 HDVDQTKLKKSL---------DLTVESCVNLVGVNLNTASSH-----LLTYISGLGPQLA 503
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ GA +RK + +G K F GFLR+ +S LD+T +
Sbjct: 504 QNIVNYRAENGAFTSRKQLMKVPRMGAKAFEQCAGFLRIPQSKNP---------LDNTAV 554
Query: 741 HPESYGLAQELAKEV 755
HPESY + +++AK++
Sbjct: 555 HPESYCIVEQMAKDL 569
>gi|392398436|ref|YP_006435037.1| transcriptional accessory protein [Flexibacter litoralis DSM 6794]
gi|390529514|gb|AFM05244.1| transcriptional accessory protein [Flexibacter litoralis DSM 6794]
Length = 807
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 130/563 (23%), Positives = 234/563 (41%), Gaps = 110/563 (19%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
YK+ KR T+ S + GL +A + +L L+ + ++ DE + K E +A
Sbjct: 111 YKQ-KRKTRASMAKEKGLEPLALQI-LEQGRLDLEKTAKQFIDEEKGVKTLEEALA---- 164
Query: 267 CAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQF 326
GAR + A I+ R +R++F +S + + + +
Sbjct: 165 ------------GARDIIAEHINEHAETRAKMRTVFQKEGTISAKVIAGKEKEGEKYRDY 212
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSK 386
+W E+PL + + L +++AE+E +L + ++ ++ + + +E+++
Sbjct: 213 --FEW--EEPLIEAPSHRVLALRRAEKEGILLLDLQPNQE---RAITLLEENFVHSNTKS 265
Query: 387 SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR 446
S DQ ++ +KDA L PSM E R L RA + + + L + P +
Sbjct: 266 S-----DQVQIAVKDAYKRLLKPSMETEIRMLSKQRADQEAITIFAENLRQLLLSAPLGQ 320
Query: 447 KDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCL---TLRSQNV 500
K+ PG + V+LD G++V D ++ T+++ N+
Sbjct: 321 KNT--------------LALDPGFRTGCKLVVLDKQGKLVYNDTIYPNEPQKDTIKAGNI 366
Query: 501 RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
LL + + +G S + E K + P+ +
Sbjct: 367 ------------LLALAEKYNIEAIAIGNGTASRET------ERFVKAIPNLPKSI---- 404
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGP 616
IV ES +Y S ++ ++ V+ AV++GR L +PLA + L G
Sbjct: 405 ---QIVVVSESGASIYSASDVAREEFADYDLTVRGAVSIGRRLMDPLAELVKLDPKSIGV 461
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
G+ L+N L + ++ N VG+++N A +E L ++SGLG
Sbjct: 462 GQYQHDVDQKQLKNSL---------DDTVMSCVNAVGVEVNTA-SKEL----LSYVSGLG 507
Query: 677 PRKAASLQRSLV----RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
ASL +++V GA +RK LG K F A GFLR+R +
Sbjct: 508 ----ASLAKNIVTFRNENGAFTSRKQLKKVPRLGDKAFEQAAGFLRIRDAK--------- 554
Query: 733 DLLDDTRIHPESYGLAQELAKEV 755
+LLD + +HPESY + +++AK++
Sbjct: 555 NLLDASAVHPESYPIVEKMAKDL 577
>gi|317478706|ref|ZP_07937860.1| tex-like protein domain-containing protein [Bacteroides sp. 4_1_36]
gi|316905136|gb|EFV26936.1| tex-like protein domain-containing protein [Bacteroides sp. 4_1_36]
Length = 704
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 127/552 (23%), Positives = 222/552 (40%), Gaps = 94/552 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L L++ +P PEE A+ +
Sbjct: 100 KPKRKTRAEAARQKGL-----------EPLATLLMLQR------EPH--PEERAAGYVKG 140
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ + L+GAR + A +S + R VR+ F +++ + + +
Sbjct: 141 DVKNVEDALKGARDIIAEHVSEDERARNSVRNAFARQGILTAKVVKGKEEEATKYRDYFD 200
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ L++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 201 CS----ESLKRCNSHRLLAIRRAEAEGLLKVSIS-PDDE------ECVER-LERQFVRSN 248
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
Q ++D+ L PS+ E + RA + + + L + P +K
Sbjct: 249 NPCGQQVAEAVQDSYKRLLKPSIETEFATQSKERADEEAIKVFAENLRQLLLASPLGQK- 307
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + V LD+ G + L ++N+
Sbjct: 308 -----------RVMG--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVS 344
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E K M + + + AV + + + E F + RD+ I
Sbjct: 345 KQKEAFAKLQMMIESYKI--DAVAIGNGTASRETEE--FLKHQRFNRDI-------QIFI 393
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSW 623
E +Y S+I+ D+ P V+ AV++GR L +PLA + + G G+
Sbjct: 394 VSEQGASIYSASKIARDEFPDYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDV 453
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
L+ L +Q + + N VG+++N A L +ISGLGP+ A ++
Sbjct: 454 DQTKLKKSL---------DQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQLAQNI 499
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
GA +RK+ + +G K F GFLR+ Q + LD+T +HPE
Sbjct: 500 VNYRTENGAFTSRKELMKVPRMGAKAFEQCAGFLRI---------PQAKNPLDNTAVHPE 550
Query: 744 SYGLAQELAKEV 755
SY + +++AK++
Sbjct: 551 SYCIVEQMAKDL 562
>gi|402311910|ref|ZP_10830840.1| Tex-like protein N-terminal domain protein [Lachnospiraceae
bacterium ICM7]
gi|400370571|gb|EJP23553.1| Tex-like protein N-terminal domain protein [Lachnospiraceae
bacterium ICM7]
Length = 717
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 146/633 (23%), Positives = 260/633 (41%), Gaps = 139/633 (21%)
Query: 144 YKKRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVG 201
Y + EE+ ++ A+ +Q L D + K +E+A T VDD+ F
Sbjct: 60 YLRNLEEKKEQVLS----AIEEQGKLTDELKKEIESALTLVAVDDLYRPF---------- 105
Query: 202 VDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK----ET 257
RPKR T+ + GL A+ E+L Q +LE+ L D + ET
Sbjct: 106 -------RPKRRTRAMIAIEKGLENFATDI--YEEKLK-QPALEEAKKYLSDKEGLEVET 155
Query: 258 PEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPTPDG 316
PE+ + GA + A +IS + R +R + F + S
Sbjct: 156 PED---------------AIAGAMDIIAEKISDDAAFRNKIRDLSFKQGILTSVAKDETV 200
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC- 375
+S ++++ FA + + K + L I + EEEK+L V + P + + + C
Sbjct: 201 ESVYENYYNFA-------ESVSKTAGYKILAINRGEEEKILTVKLDPPVEEIIRYLEKCI 253
Query: 376 -KEHYLSDGVSKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLME 430
K+H N+ E ILKD +D+ + PS+ ++ RS ++ +A+ +
Sbjct: 254 IKKH-------------NEHTEQILKDTIDDAYKRLIAPSIERDIRSSLTEKAEDEAIKV 300
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--V 487
+GK L + P A RV+ W P + ++D +G+V+D V
Sbjct: 301 FGKNLTQLLMQPP-------------VAGRVV-LGWDPAFRTGCKLAVVDETGKVLDTKV 346
Query: 488 LFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFK 547
+F Q ++ L + + + ++ LG S S +I +
Sbjct: 347 IFPTA---------PQNKVAESKKILKELIKKYNISLISLGNGTASRES-----EAVIVE 392
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
+++E +L + +E+ +Y S++++++ P + A ++ R L++PL
Sbjct: 393 LIKEVDT-------KLEYIIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLEDPL 445
Query: 608 AMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
A + + G G+ L L+ G++E D N+VG+D+N A
Sbjct: 446 AELVKIDPKSIGVGQYQHDMNQKKLSEALS-----GVVE----DCVNKVGVDLNTA---- 492
Query: 664 WQFAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRS 722
APL ++ISG+ A ++ G+ TRK+ + LG K F GFLR+
Sbjct: 493 --SAPLLEYISGISKAVAKNIVVYREENGSFKTRKELLKVSKLGPKAFEQCAGFLRINDG 550
Query: 723 GQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ LD T +HPESY ++L + +
Sbjct: 551 KEP---------LDMTSVHPESYEATKKLLESI 574
>gi|148378180|ref|YP_001252721.1| RNA-binding protein [Clostridium botulinum A str. ATCC 3502]
gi|153931281|ref|YP_001382580.1| RNA-binding protein [Clostridium botulinum A str. ATCC 19397]
gi|153934599|ref|YP_001386133.1| RNA-binding protein [Clostridium botulinum A str. Hall]
gi|148287664|emb|CAL81729.1| putative RNA binding protein [Clostridium botulinum A str. ATCC
3502]
gi|152927325|gb|ABS32825.1| RNA-binding protein [Clostridium botulinum A str. ATCC 19397]
gi|152930513|gb|ABS36012.1| RNA-binding protein [Clostridium botulinum A str. Hall]
Length = 718
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 166/724 (22%), Positives = 299/724 (41%), Gaps = 133/724 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A ++ LE G+ ED K E + K
Sbjct: 106 RPKRRTRATIAEEKGLKPLA------------EIILE--GNFKEDIKVYASEFINEEK-- 149
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC-----PTPDGDSAIDSF 323
+ + LQGA + + IS E RK++R+ + V+ T PTP + +
Sbjct: 150 EVKTIEEALQGAMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTP-----YEMY 204
Query: 324 HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ + ++ ++ + L I + E+EK+L + ED K+ K L
Sbjct: 205 YDY-------KENVKNIPPHRILAINRGEKEKILTAKVTCNED---KIIDYLKSRSLKG- 253
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+K ++ ++ +KD+L + PS+ +E RS ++ + + + + + L + P
Sbjct: 254 -NKETDVYIEES---VKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAP 309
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K + + PG + +LD +G+++D T
Sbjct: 310 IKDK--------------VVLGYDPGFRTGCKIAVLDETGKLLD-------TATVYATAP 348
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
Q + + L K + + V+ LG S S E+I KM++E + G +
Sbjct: 349 QNDVEGSIKVLKKLIYKYDVDVISLGNGTASRES-----EEVISKMLKEIKEEKGKD--- 400
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ V E+ +Y S++++++ P +++ A+++ R LQ+PLA + + G G+
Sbjct: 401 IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISICRRLQDPLAELVKIDPKSIGVGQ 460
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L G++E D N VG+D+N A + L +ISG+
Sbjct: 461 YQHDVSQKKLDESLK-----GVVE----DCVNAVGVDLNTATP-----SLLSYISGINSS 506
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ G RK+ + LG+K F GFLRV S + LD+T
Sbjct: 507 IAKNIVAYREEIGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEP---------LDNT 557
Query: 739 RIHPESY-------GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
+HPESY L Q K+V N ++ D++D + + ++ + ++ D+ K LLD
Sbjct: 558 GVHPESYEGTKKFLSLLQYDIKDVKNNKLQ-DIDDRVN--NIGLDDICNKIDIGKPTLLD 614
Query: 792 RHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT-LAEGRVV 850
IKE K+ + D R +P + +G + T L V+
Sbjct: 615 -IIKEIKKPGR----------------DPREDLPKP------ILKTGIVDITQLKPDMVL 651
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY 910
TVR V A + G++ SD + L D + GDI+ +I + K R
Sbjct: 652 MGTVRNVADFGAFVDIGVHQDGLVHISQLSDRFVKHPL-DIVKVGDIVEVRILEVDKKRN 710
Query: 911 QVFL 914
++ L
Sbjct: 711 RISL 714
>gi|320353558|ref|YP_004194897.1| Tex-like protein [Desulfobulbus propionicus DSM 2032]
gi|320122060|gb|ADW17606.1| Tex-like protein [Desulfobulbus propionicus DSM 2032]
Length = 724
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 118/526 (22%), Positives = 215/526 (40%), Gaps = 80/526 (15%)
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAV------LQGARHMAAVEISC 290
Q+ + LE + L K P E+ A N Q V L GAR + A IS
Sbjct: 114 QIAREKGLEPLAALLHGQKTQPIEVE-----AFVNPEQEVATVEEALSGARDIIAEWISE 168
Query: 291 EPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQK 350
+ +R +R IF AV+++ + + + +F + +W +P+ K + L + +
Sbjct: 169 DAAIRARLRDIFRHKAVITSTVVKNQEESGATFRDY--FQW--REPVGKAAGHRLLAMFR 224
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPS 410
E+ K+L ++ + PE+ + C V ++ Q L + D+ L PS
Sbjct: 225 GEQAKVLSLSFRPPENEALTILHRC--------VVRANGFAGQQVTLAVDDSYKRLLAPS 276
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG- 469
+ E R+ + +A + + L + P +K R +A PG
Sbjct: 277 LENELRTQLKKQADQEAIAVFADNLRELLLAPPLGQK------------RTMA--LDPGF 322
Query: 470 KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA 529
+ V L G+++D T+ R QQ + + +L+ ++ + +G
Sbjct: 323 RTGAKLVCLGEQGQLLD-----WTTIYPTLSRAQQEEAA--QTVLRLCRRYRIEAIAIGN 375
Query: 530 VNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPG 588
S + E R G ++ E+ + DE +Y S ++ + P
Sbjct: 376 GTAS-------------RETEAFVR--GLDLPSEVVVTLVDERGASVYSASEVARAEFPD 420
Query: 589 QKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDV 648
V+ AV++GR LQ+PLA + L + ++ + L ++ V+V
Sbjct: 421 HDITVRGAVSIGRRLQDPLAELVKLDPKAIGVGQYQHDVQQKALKQS-----LDDVVVSC 475
Query: 649 TNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKK 708
N+VG+++N A +E L ++SGLG AA++ G R+ + LG+K
Sbjct: 476 VNRVGVEVNSA-SKEL----LAYVSGLGGTLAANILAYRREKGPFTDRRQLLHVPRLGRK 530
Query: 709 VFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
F GFLR+ + LD + +HPE YG+ +++A+E
Sbjct: 531 AFEQCAGFLRIHDAANP---------LDRSGVHPERYGIVEQMARE 567
>gi|306833951|ref|ZP_07467075.1| YhgF like protein [Streptococcus bovis ATCC 700338]
gi|304423952|gb|EFM27094.1| YhgF like protein [Streptococcus bovis ATCC 700338]
Length = 708
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 184/819 (22%), Positives = 332/819 (40%), Gaps = 193/819 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K DL++ I + LDL Q IPFIA YRKE DN D+ +
Sbjct: 6 KIAQDLNLKESQIAKVLDLTS-QGNTIPFIARYRKEMT--------------DNLDEVQ- 49
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI DLDK L RK+ + + + EE+ + L
Sbjct: 50 ---------IKAIIDLDKSMTALTDRKATVLA----KIEEQGK-------------LTAE 83
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ K++E AE +V++ L+ P YK KR TK + +AGL+ +A
Sbjct: 84 LKKAIENAEKLADVEE------LYLP----------YKE-KRRTKATIAREAGLFPLA-- 124
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+L LQ K + E A+NF F ++ L GA + S
Sbjct: 125 ------RLILQ------------NKPSLEVEAANFITEGFETADKTLAGACEILIEAFSE 166
Query: 291 EPCVRKYV-RSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ +R +V I+ ++++ST D A D F EK + K + + L +
Sbjct: 167 DNQLRSWVYNEIWSYSSIISTVK----DEAADDNKTFQIYYDFSEK-VSKIQGYRILALN 221
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFS---DCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+ E+ +L+V + D + + K Y+ D ++K+ +
Sbjct: 222 RGEKLGILKVGFEHNIDKMVRFMGARFKNKNAYIDDVIAKT---------------IKKK 266
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
++P+M + S ++ A+ + + + L N + V P + K + +
Sbjct: 267 IVPAMERRVHSELTESAEDGAIELFSENLRNLLLVSPLKGK--------------MVLGF 312
Query: 467 GPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
P + ++D +G+++ + SQ + +QSKK+ L + + + ++
Sbjct: 313 DPAFRTGAKLAVVDQTGKLMTTQVIYPVPPASQ-AKIEQSKKD----LAELIRTYGVEII 367
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+G S S + + +++ P ++S V +ES +Y S ++ +
Sbjct: 368 AIGNGTASRES-----EAFVAQALKDFP--------DVSYVIVNESGASVYSASELARHE 414
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKY 638
P + A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 415 FPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLAENLDF------- 467
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
V+ V NQVG++IN A A L +SGL + ++ + G I +R+D
Sbjct: 468 -----VVDTVVNQVGVNINTA-----SPALLAHVSGLNKTISENIVKYRDENGRIASRED 517
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
LG K F A GFLR+ + ++LD+T +HPESY + L KE+
Sbjct: 518 IKKVPRLGAKAFEQAAGFLRIPGAE---------NILDNTGVHPESYKAVEHLLKEL--- 565
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
++ D +D+ ++ ++ V ++T +I + ETL I +L+ +
Sbjct: 566 ----NITDLDDSAKIKLQSVS-----IETMAETINIGQ-------ETLKDIIADLLKPGR 609
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
D R+ ++ P ++ IS L G+ ++ TVR V
Sbjct: 610 DLRDDFEAPVLRQDVLDISD-----LEIGQKLEGTVRNV 643
>gi|227499760|ref|ZP_03929860.1| S1 domain RNA-binding protein [Anaerococcus tetradius ATCC 35098]
gi|227218146|gb|EEI83412.1| S1 domain RNA-binding protein [Anaerococcus tetradius ATCC 35098]
Length = 699
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 231/537 (43%), Gaps = 102/537 (18%)
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
+ + GL L+ + +E + E +E A + ++ + L+ + + A +I+
Sbjct: 115 AREFGLDKLLDFLMNEAKSESEGLDE-AEKYLVEGLDTKEDALERSLDILAEDIANNIMA 173
Query: 295 RKYVR-SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEE 353
R +R F+ +V+T D ++++ F K LR+ + Q L I +AE+
Sbjct: 174 RNIIRRDAFVRAKLVATLK-EDESGLYENYYDF-------NKKLREMKSFQTLAINRAEK 225
Query: 354 EKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN----FLLP 409
E L V I+ ++ KL D Y D + +ND + +L +D+ +LP
Sbjct: 226 ENALSVKIEFTDNYNKKLIGDL---YRKD------KNFNDYQNFLLDKTVDDAYKRLMLP 276
Query: 410 SMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY--QRKDNDITPDEEAAPRVLACCWG 467
S+ E R+ ++ +A+ + +G L PY QR P + A
Sbjct: 277 SITTEMRNYITEKAEDDSIEVFGNNLK------PYLLQR------PIKGQA----VIGLD 320
Query: 468 PG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHV 524
PG + ++D G+ +D V++ V +K L + + +
Sbjct: 321 PGFRTGCKVAVVDKFGKYLDSAVIYP---------VEPHNKEKEAIGTLKSLIKKYGVSL 371
Query: 525 VVLGAVNLSC-TSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
+ LG S T L ++ K+V+E +D +S +E+ +Y S +
Sbjct: 372 IALGNATASRETEL------VVNKLVKE--------VDNISYAIVNEAGASVYSASELGE 417
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDE 636
++ P ++ A+++ R LQ+P+A + + G G+ ++ S KL DE
Sbjct: 418 EEFPNLDVTIRGAISMARRLQDPMAELVKIEPKHIGIGQYQHDLDSKKL---------DE 468
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTR 696
+ + +V+ D N+VG+ IN A + L ++SGL P A ++ + G + R
Sbjct: 469 E---LSKVVEDAVNEVGVTINNA-----SYKLLSYVSGLNPSLAKRIEEDF-KEGKLVYR 519
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
KD T GLG K + GFLR S + +LD+T +HPESY +A+E+ K
Sbjct: 520 KDLKTVKGLGDKTYKLCAGFLRFPDSPE---------ILDNTAVHPESYKIAKEINK 567
>gi|302669575|ref|YP_003829535.1| S1 RNA binding domain-containing protein [Butyrivibrio
proteoclasticus B316]
gi|302394048|gb|ADL32953.1| S1 RNA binding domain-containing protein [Butyrivibrio
proteoclasticus B316]
Length = 890
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 157/679 (23%), Positives = 282/679 (41%), Gaps = 158/679 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDK--KWL--L 132
IPFI+ YRKE SL ND+ + +LD+ K+L L
Sbjct: 31 IPFISRYRKEVTGSL-------------NDE--------------QLRNLDERLKYLRSL 63
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
++R+ L S EE ++ DE R + AAET ++D+ L +
Sbjct: 64 EERREQVLASI------EEQGKMTDELR------------AKIVAAETMVAIEDLYLPY- 104
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
RPKR T+ S + GL +A E L Q E
Sbjct: 105 ----------------RPKRKTRASIAREKGLEGLA-------EILLAQ----------E 131
Query: 253 DPKETPEEMASNFKCAM-FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC 311
K EE A+ N + LQGA + A ++S R Y+R M+ ++++
Sbjct: 132 TTKPLAEEAAAYVDAEKGVNDAAEALQGAMDIIAEDVSDNADFRTYIREATMEQGILTS- 190
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
+ A + + G E+P++K + L + + E EK L V I+ PE+ +
Sbjct: 191 -KAKDEKAQSVYEMYYGY----EEPIKKVLGHRVLALNRGEAEKFLVVKIEAPEEQIL-- 243
Query: 372 FSDCKEHYLSDGVSKSAQ-LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
YL+ + K+ + E I +DA + + P++ ++ R+ ++ +A+ +
Sbjct: 244 ------QYLNKKMLKNDNPITTPVIEEINQDAYERLIAPAIERDIRNELTEKAEDGAISV 297
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--V 487
+GK L + P A VL W P + ++D++G+V+D V
Sbjct: 298 FGKNLTQLLMAPPI------------AGKTVLG--WDPAFRTGCKLAIVDATGKVLDTKV 343
Query: 488 LFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFK 547
++ Q+K + + LK ++D + V L +V S + + ++I +
Sbjct: 344 IYPTA----------PQNKVEESKAELKKLIDK--YDVDLISVGNGTASRESE--QVIVE 389
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
+++E + V + V +E+ +Y S++++++ P + A ++ R LQ+PL
Sbjct: 390 LIKELDKSVQY-------VIVNEAGASVYSASKLATEEFPQFDVGQRSAASIARRLQDPL 442
Query: 608 AMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
A + + + S + ++ + + +E V+ D N+VG+D+N A A
Sbjct: 443 AELVKI-----DPKSIGVGQYQHDMNQKKLGETLEGVVEDCVNKVGVDLNTA------SA 491
Query: 668 P-LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
P LQ+ISG+ A ++ G +R + + LG K + GFLR+ G+
Sbjct: 492 PLLQYISGISKVIAKNIVDYREENGKFKSRAELLNVPKLGPKAYEQCAGFLRI-ADGE-- 548
Query: 727 SSSQFIDLLDDTRIHPESY 745
+ LD T +HPESY
Sbjct: 549 ------NPLDATSVHPESY 561
>gi|347530860|ref|YP_004837623.1| transcription accessory protein [Roseburia hominis A2-183]
gi|345501008|gb|AEN95691.1| transcription accessory protein [Roseburia hominis A2-183]
Length = 715
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 142/660 (21%), Positives = 280/660 (42%), Gaps = 113/660 (17%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSAIDSFHQFAG 328
+++ + GA + A IS E R ++R + + + ST P+ +S + ++ F
Sbjct: 150 VTTAEEAIAGASDIIAESISDEADYRTHIRDLTVKKGRMTSTAKDPETESVYEMYYDF-- 207
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
++P+ K + L + + E+EK L V I+ P++ + + K+ + D ++
Sbjct: 208 -----DEPVAKLAGHRILAVNRGEKEKFLTVKIEAPQEDILRYLE--KKVIVRDN-PQTN 259
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
++ D +++DA D + P++ +E RS ++ RA+ + +GK L + P
Sbjct: 260 EVLRD----VVRDAYDRLIAPAIEREIRSNLTERAEDGAIRVFGKNLEQLLMQPPI---- 311
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQS 505
A VL W P + ++D +G+V+D V++ Q+
Sbjct: 312 --------AGQVVLG--WDPAFRTGCKLAVVDPTGKVLDTTVIYPTA----------PQN 351
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
K + + +LK ++ + H+ ++ N + + + +II +++E P V +
Sbjct: 352 KVAEAKAVLKKLI-AKYHITLISLGNGTASRESE---QIIVDLLKELPVKVQY------- 400
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREIL 621
+ +E+ +Y S++++++ P + A ++ R LQ+PLA + + G G+
Sbjct: 401 IIVNEAGASVYSASKLATEEFPNFDVGQRSAASMARRLQDPLAELVKIDPKSIGVGQYQH 460
Query: 622 SWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAA 681
L L G++E D N+VG+D+N A + L+++SG+ A
Sbjct: 461 DMNQKKLGEALG-----GVVE----DCVNKVGVDLNTA-----SASLLEYVSGISKTLAK 506
Query: 682 SLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIH 741
++ G +R + LG K + GFLR+ G + LD T +H
Sbjct: 507 NIVTYREENGRFVSRAGLLKVPKLGPKAYEQCAGFLRI---GDGKNP------LDATGVH 557
Query: 742 PESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKREN 801
PESY ++L K L+ + V++R K + + I + K+ +
Sbjct: 558 PESYDATKKLLKR----------------LDYTLSDVKER----KVEGISKKIHDYKKLS 597
Query: 802 K-----RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRR 856
+ TL I +EL +D R +P + I L G +++ TVR
Sbjct: 598 EELGVGEMTLQDIVKELEKPARDPREDMPKPILRSDVLEIKD-----LTPGMILKGTVRN 652
Query: 857 VQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSI--QKNRYQVFL 914
V A + G++ SD + L + + GDI+ K+ S+ +K R Q+ +
Sbjct: 653 VIDFGAFVDIGVHQDGLVHISQMSDKFIKHPL-EVVSVGDIVEVKVLSVDPKKQRIQLTM 711
>gi|160946420|ref|ZP_02093629.1| hypothetical protein PEPMIC_00380 [Parvimonas micra ATCC 33270]
gi|158447536|gb|EDP24531.1| Tex-like protein N-terminal domain protein [Parvimonas micra ATCC
33270]
Length = 697
Score = 90.5 bits (223), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 148/703 (21%), Positives = 282/703 (40%), Gaps = 177/703 (25%)
Query: 77 IPFIAMYRKEECLSL----LKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
IPFIA YRKE +L L++LEQ L + +L+++
Sbjct: 31 IPFIARYRKEVTGNLDDEILRNLEQK---------------------LQYLRNLEQR--- 66
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+E+ R+ DE +L D + K + AET +V+D+ L F
Sbjct: 67 ----------------KEDVIRLIDEL-----GELTDELKKEILNAETLSKVEDIYLPF- 104
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS-----KFGYSSEQLGLQLSLEKM 247
RPK+ T+ + + GL +A KF ++ + +K+
Sbjct: 105 ----------------RPKKRTRATIAKEKGLKPLADLILDRKFKENNFE-------QKV 141
Query: 248 GDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
+ + + KE + N +A + GA + A IS + R +R N +
Sbjct: 142 SEFISEEKE------------VLNIDEA-MAGALDIIAEMISEDKDFRDILRKDAEKNGI 188
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS 367
+ + + ++ D +++F+ + + K + L I + E+EK L+V+IKL ++
Sbjct: 189 LVSEKGKEENNVYDMYYEFS-------EKISKLPAHRILAINRGEKEKALKVSIKLSDEK 241
Query: 368 L--NKLFSDCKE------HYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLM 419
LFS C + +L D V D+ + L P + E R+ +
Sbjct: 242 NIGEILFSLCMDDKNFCHKFLKDAVI---------------DSYNRLLFPQIETEIRANL 286
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVML 478
+A + + +GK L + P + + PG + ++
Sbjct: 287 KEKADTQSIEVFGKNLKPYIMQSPILDR--------------VVLGIDPGYRTGCKVAVI 332
Query: 479 DSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
+G V+D + + Q+ K +E L K + + ++ +G S + K
Sbjct: 333 SKTGSVLD-------HVNIYPTKPQEKIKESKEILAKLIKKYDVSLIAIGNGTASRETEK 385
Query: 539 DDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVA 598
++ +++ E ++ +L +E+ +Y S++ ++ P V+ A++
Sbjct: 386 -----VVVELINELKKE------DLFYSIVNEAGASIYSASKLGQEEFPDLDVTVRGAIS 434
Query: 599 LGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINL 658
+ R +Q+P+A + + I ++ + LT + V+ D N+VG+D+N
Sbjct: 435 IARRIQDPMAELVKIEPKHIGIGQYQHDVNQKQLTE-----TLSDVIEDCVNKVGVDVNT 489
Query: 659 AIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLR 718
A F+ L +ISG+ A +L GA R + G+G K + + GFLR
Sbjct: 490 A-----SFSLLSYISGMTKTMAKNLVSYRDENGAFKNRDEIKKVKGIGPKAYTQSAGFLR 544
Query: 719 VRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIE 761
+R LD+T +HPESY E+A+++Y +D++
Sbjct: 545 IRNGENP---------LDNTAVHPESY----EIAEKLYGKDLD 574
>gi|60681362|ref|YP_211506.1| RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|60492796|emb|CAH07570.1| putative RNA-binding protein [Bacteroides fragilis NCTC 9343]
Length = 707
Score = 90.5 bits (223), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 222/558 (39%), Gaps = 106/558 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQ-LGLQLSLEKMGDELEDPKETPEEMASNFKC 267
+PKR T+ + + GL +A E LG ++ GD
Sbjct: 106 KPKRKTRAEAARQKGLEPLALLLMMQRENNLGSRIPAFVKGD------------------ 147
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFA 327
++ L+GAR + A ++S + R VR++F AV+S D + +
Sbjct: 148 --VKDAEDALKGARDIIAEQMSEDERARNAVRNLFARQAVISAKVVKGKDEEAAKYRDY- 204
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ PL++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 205 ---FDFSSPLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDD------ECLER-LDRQFVRS 253
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
Q ++DA L PS+ E SL +A + + + L + P +K
Sbjct: 254 NNECGRQVAEAVQDAYRRLLKPSIETEFASLSKEQADDEAIRVFAENLRQLLLAPPLGQK 313
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ--- 503
RV+ PG + V LD+ G +V ++N+
Sbjct: 314 ------------RVMGI--DPGFRTGCKVVCLDAQGNLV----------HNENIYPHPPV 349
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE- 562
K +L K + ++ + +G S E V H+ +
Sbjct: 350 DKKTEAASKLRKMIEAYKIEAIAIGNGTAS----------------RETENFVTHQQFDR 393
Query: 563 -LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
+ + E +Y S+ + D+ P V+ AV++ R L +PLA + + G G
Sbjct: 394 PVQVFVVSEQGASIYSASKTARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVG 453
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ L+ L +Q + + NQVG+++N A L +ISGLGP
Sbjct: 454 QYQHDVDQTKLKKSL---------DQTVENCVNQVGVNLNTASSH-----LLTYISGLGP 499
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
+ A ++ GA +RK+ + +G K F GFLR+ G+ + LD+
Sbjct: 500 QLAQNIVAYRAANGAFASRKELMKVPRMGAKAFEQCAGFLRI-AGGE--------NPLDN 550
Query: 738 TRIHPESYGLAQELAKEV 755
T +HPESYG+ Q++AK++
Sbjct: 551 TAVHPESYGIVQQMAKDL 568
>gi|387791761|ref|YP_006256826.1| transcriptional accessory protein [Solitalea canadensis DSM 3403]
gi|379654594|gb|AFD07650.1| transcriptional accessory protein [Solitalea canadensis DSM 3403]
Length = 761
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 157/710 (22%), Positives = 282/710 (39%), Gaps = 155/710 (21%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K HDL I + + LL+ + IPFI+ YRKE SL +EV
Sbjct: 9 KIAHDLGIGSKQVEATVALLN-EGATIPFISRYRKELTGSL------DEV---------- 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI D ++ L KR+ + + +++ +L D
Sbjct: 52 --------AIGAIRDEIERLRELDKRRETILNSIREQ-----------------GKLTDE 86
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ K + +AET ++D L+ P YK PKR TK + + GL +A
Sbjct: 87 LEKDILSAETMSRLED------LYLP----------YK-PKRRTKATIARERGLEPLA-- 127
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEI 288
QL +D K+ E A+ F A NS LQGAR + A I
Sbjct: 128 ----------QLIFA------QDTKDIDTE-ATKFVDAEKEVNSESEALQGARDIIAEWI 170
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLI 348
+ + R +R ++ D AV+++ + + + +W + L+ + L +
Sbjct: 171 NEDAVCRDKMRVLYTDKAVITSSVMKGKEEEGAKYRDY--FEW--SEQLKNIPSHRLLAL 226
Query: 349 QKAEEEKLLQVTIKL-PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
++ E+E +L + I ED++N + + KS +Q ++ + D L
Sbjct: 227 RRGEKEMILSLDIAPEKEDAIN---------IIENQFVKSRGDAAEQIKIAIDDCYKRLL 277
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
PS+ E R L A ++ + L + P +K +LA
Sbjct: 278 SPSIETEMRLLTKKGADEKAIVVFADNLRELLLASPMGQKS------------ILAI--D 323
Query: 468 PG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
PG + V+L+ G++++ + + + ++ +L + +
Sbjct: 324 PGFRTGCKVVVLNPQGKLLENTVIYPTASSAAKIVEAEAV------VLALCQRFKIEAIA 377
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQL 586
+G S + E +++ P+ + ++V +E+ +Y S ++ ++
Sbjct: 378 IGNGTASRET------EAFVNGIKDLPKAI-------TVVMVNEAGASVYSASEVAREEF 424
Query: 587 PGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIE 642
P V+ AV++GR L +PLA + + G G+ L+N L +
Sbjct: 425 PDYDVTVRGAVSIGRRLADPLAELVKIDPKSIGVGQYQHDVDQAALKNKL---------D 475
Query: 643 QVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTA 702
+V+ N VG+++N A + L ++SGLGP A ++ GA TRKD +
Sbjct: 476 EVVASCVNAVGVEVNTASKQ-----LLTYVSGLGPALAQNIINYRNEKGAFKTRKDLMDV 530
Query: 703 HGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
+G+KVF A GFLR+ LD + +HPESY + +++A
Sbjct: 531 PRMGEKVFEQAAGFLRILNGEHP---------LDSSSVHPESYHIVEKMA 571
>gi|227873636|ref|ZP_03991873.1| S1 domain RNA-binding protein [Oribacterium sinus F0268]
gi|227840507|gb|EEJ50900.1| S1 domain RNA-binding protein [Oribacterium sinus F0268]
Length = 753
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 156/691 (22%), Positives = 288/691 (41%), Gaps = 104/691 (15%)
Query: 244 LEKMGDELEDPKETPEEMASNF---KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
LE + L P + PE A + + + ++ A L A+ + A + S + +R+++R+
Sbjct: 153 LEGLAKALLLPCDNPEAEAEKYISPEKEVLTATDA-LNYAKDILAEDFSEDARLREWIRN 211
Query: 301 IFMDNAVVSTC-----PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEK 355
+ + + TP+ + + F E+ ++ + L + + E+EK
Sbjct: 212 KSLKEGFICSSLKEKEETPESKTYENYFSY--------EEKVQSIPGHRILALNRGEKEK 263
Query: 356 LLQVTIKLPEDSLNKLFSDCKEHYLSDG--VSKSAQLWNDQRELILKDALDNFLLPSMVK 413
+L V ++ PE+ + HY+ + VSK + E I D+ + PS+
Sbjct: 264 ILSVKLRFPEEDIL--------HYIEEQMQVSKKGKCRPYLEEAI-ADSYKRLIAPSIET 314
Query: 414 EARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPE 472
E R++++ +A ++ + L + P K + W PG +
Sbjct: 315 EIRNILTEKADDGAILVFSDNLKQLLMQAPITGK--------------VVLGWDPGFRTG 360
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
++D++G+V+D ++Q V++ +K + + + H ++ LG
Sbjct: 361 CKIAVVDATGKVLDTTVIYPTPPKNQ-VKESMAK------IHQLIQKHHVDIIALGNGTA 413
Query: 533 SCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGN 592
S S K +I ++E V + V +E+ +Y S++++++ P
Sbjct: 414 SRESEK-----VISDYLKEQKSPVKY-------VIVNEAGASVYSASKLATEEFPNFDVG 461
Query: 593 VKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQV 652
+ + ++ R LQ+PLA + + + ++ ++ LT + +V+ D N+V
Sbjct: 462 ERSSTSMARRLQDPLAELVKIDPKSIGVGQYQHDMNQSKLTEQ-----LNKVVEDCVNKV 516
Query: 653 GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVN 712
G+D+N A + L +ISG+ A ++ GA +RK+ + LG K F
Sbjct: 517 GVDLNTA-----SASLLSYISGISKTIAKNIVAFREENGAFKSRKELLKVAKLGPKAFEQ 571
Query: 713 AVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQE---LAKEVYNRDIEGDLNDDED 769
+ GFLR+ R G+ +LLD T +HPESY +A+E LA N + G
Sbjct: 572 SAGFLRI-RGGK--------ELLDMTSVHPESYSVAKEMLALAGIAENELLSG------K 616
Query: 770 ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQ 829
EM + + P LK E+K TL I L +D R P
Sbjct: 617 GKEMG-KILSSLPGGLKGV-------EQKLSVGEYTLKDIIEALAKPGRDPREDVPAPIL 668
Query: 830 DEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELS 889
E+ E ED L EG V+Q TVR V A + G++ S + L
Sbjct: 669 REDVL----ELED-LKEGMVLQGTVRNVIDFGAFVDIGVHQDGLVHISALSKKFVKHPL- 722
Query: 890 DKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
D + GDI+ K+ S+ R ++ L ++ E
Sbjct: 723 DVVKLGDIVKVKVLSVDVARKKISLSMKDVE 753
>gi|392938874|ref|ZP_10304518.1| LOW QUALITY PROTEIN: transcriptional accessory protein
[Thermoanaerobacter siderophilus SR4]
gi|392290624|gb|EIV99067.1| LOW QUALITY PROTEIN: transcriptional accessory protein
[Thermoanaerobacter siderophilus SR4]
Length = 712
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 181/850 (21%), Positives = 349/850 (41%), Gaps = 184/850 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N ++ L + +L++K
Sbjct: 32 IPFIARYRKEATGSLSDEVLRN-----------------FYDRLTYLRNLEEK------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++++ R+ DE +L + I +E A T +EV+D+ F
Sbjct: 68 ------------KQDTIRLIDE-----QGKLTEEIKAKIENATTLQEVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A K S+E GD
Sbjct: 106 ------------RPKRRTRATIAKEKGLEPLA-KVISSNEVTD--------GD------- 137
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A + + + QGA + A +IS + +RKY+RS +N ++ T
Sbjct: 138 -VEEYAKPYLNENVPTVEEAYQGAMDIIAEDISDDADIRKYIRSFTWNNGIIVTQALKQE 196
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDC 375
S + ++ + ++ ++ + L I +AE EK + V I++ E +N+L
Sbjct: 197 RSPYEMYYDY-------KEAVKTIPPHRILAINRAEREKYISVKIEIDSERIINRL---- 245
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ V+K A ++ + + ++D+ + PS+ +E R+ ++ +A+ ++ + + L
Sbjct: 246 ----IESKVNK-ASIFAEYYKKAIEDSYKRLIAPSIEREIRNTLTEKAEEKAIIVFKENL 300
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ + P + + + P + ++D +G+++D T +
Sbjct: 301 KSLLLQPPIKGH--------------VVMGFDPAYRTGCKIAIVDETGKLLD---TATIY 343
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
+ SKK +E + K+ V L A+ S + +++ I ++++E R
Sbjct: 344 PTPPQNDFENSKKVLKELIEKYN-------VTLIALGNGTASRESEMF--IAELIKELSR 394
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
+V + V +E+ +Y S I +++ P +++ A++L R LQ+PLA + +
Sbjct: 395 EVKY-------VIVNEAGASVYSASPIGTEEFPDINVSLRGAISLARRLQDPLAELVKID 447
Query: 614 ---CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G+ ++ KL D G++E D N VG+D+N A +
Sbjct: 448 PKSIGVGQYQHDVDQKKLG--------DALNGVVE----DCVNSVGVDLNTA-----SVS 490
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L+++SG+ A ++ + G R+ LG F GFLR+
Sbjct: 491 LLKYVSGINAAIAKNIVEYRNQIGKFTNREQLKNVKRLGDTTFTQCAGFLRILDGD---- 546
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
++ D T +HPE Y ++L K+ Y ++ ++ + ++D + L+
Sbjct: 547 -----NIFDSTAVHPERYETLEKLLKKFGYEKE------------KLDRKKLKDFANSLE 589
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
Y L+R +E + TLY I EL +D R +P + I + L
Sbjct: 590 EYGLERISEE--YDIGLPTLYDIVSELKKPGRDPREDLPKPILRSDVMTI-----NELKP 642
Query: 847 GRVVQATVRRVQGQRAICVLESGLA--GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
G + TVR V C ++ G+ G++ + S + L D + GDI+ ++ S
Sbjct: 643 GMELMGTVRNVTDFG--CFVDIGVHTDGLVHISEMSQSYIKHPL-DVVSVGDIVKVRVLS 699
Query: 905 IQKNRYQVFL 914
+ R ++ L
Sbjct: 700 VDIERNRISL 709
>gi|225166329|ref|ZP_03728014.1| RNA binding S1 domain protein [Diplosphaera colitermitum TAV2]
gi|224799427|gb|EEG17971.1| RNA binding S1 domain protein [Diplosphaera colitermitum TAV2]
Length = 788
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 210/487 (43%), Gaps = 74/487 (15%)
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP 336
L GAR + A IS + R+ +R+++ AVVS+ ++ F + W +P
Sbjct: 198 LAGARDILAERISDDAAAREKLRALYRSTAVVSSKVLSGKEAEAAKFKDY--FDW--TEP 253
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS----LNKLF--SDCKEHYLSDGVSKSAQL 390
L K + L +++ E+E L + I + E S L++L+ ++ + + VS +AQ+
Sbjct: 254 LAKCPSHRLLAMRRGEKELFLMMRITVDELSAIAELDRLYVKAETLKQETTAPVSCTAQM 313
Query: 391 WNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDND 450
L + DA L P+M E R A + + + L + P +K N
Sbjct: 314 -----RLTIADAYKRLLAPAMETEFRLDSKKAADATAIKVFADNLRELLLASPLGQK-NT 367
Query: 451 ITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKN 508
I D P C V+LD G+++ DV++ D+ + +
Sbjct: 368 IAID----PGFRTGCKT--------VILDRQGKLLHNDVIYP-----------DRHAVEA 404
Query: 509 DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG 568
+E++L F+ + + +G S + E R +G + IV
Sbjct: 405 -REKILGFVAQFKTEAIAIGNGTGS-------------RETEAFVRALGLPAS-IPIVSV 449
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPL 628
+ES +Y S ++ ++ P V+ AV++GR L +PLA + L + ++
Sbjct: 450 NESGASIYSASEVAREEFPNHDITVRGAVSIGRRLMDPLAELVKLDPKSIGVGQYQHDVD 509
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
+N L ++ ++ N VG+++N A L ++SGL AA++
Sbjct: 510 QNALKRS-----LDDCVISCVNNVGVELNTASKHL-----LSYVSGLNTSTAAAIVARRD 559
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
G +R + +T LG K FV A GFLR+R + + + LD + +HPESY +
Sbjct: 560 EKGPFTSRAELLTVPRLGPKAFVQAAGFLRIRDAKE--------NPLDASGVHPESYPVV 611
Query: 749 QELAKEV 755
+++A ++
Sbjct: 612 EKMAADL 618
>gi|332291651|ref|YP_004430260.1| Tex-like protein [Krokinobacter sp. 4H-3-7-5]
gi|332169737|gb|AEE18992.1| Tex-like protein [Krokinobacter sp. 4H-3-7-5]
Length = 707
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 166/706 (23%), Positives = 271/706 (38%), Gaps = 159/706 (22%)
Query: 58 ISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWH 117
+S + LDLL+ + +PFIA YRKE L D+ E
Sbjct: 13 LSEKGVKNTLDLLN-EDCTLPFIARYRKEATGGL--------------DEVE-------- 49
Query: 118 KVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEA 177
+ I +L +++ ++KRK ++ K EE+ L +L D I K+ +
Sbjct: 50 --IGKIIELKEQFETVEKRKKSIL----KSLEEQD---------VLTSELKDKIEKTQDL 94
Query: 178 AETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQ 237
E +L+ P YK+ KR TK + GL +A
Sbjct: 95 TTLE----------DLYIP----------YKK-KRKTKAETARINGLEPLAKII------ 127
Query: 238 LGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKY 297
M +DP E +A + +Q+ L+GARH+ A I+ +R
Sbjct: 128 ---------MSQNAQDP----EGLAHRYTNKEVPDAQSALEGARHIIAEWINERADIRNN 174
Query: 298 VRSIFMDNAVVST--CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEK 355
+R A + T + F + W + L + + L I +AE E
Sbjct: 175 IREQLKRFATIETKVVKKMTEEEKAQKFRDY--FDW--SESLSRCPSHRLLAILRAENEG 230
Query: 356 LLQVTIKLP-EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
++V I + E +L+K+ E L SA Q E+ LKDA L P++ E
Sbjct: 231 YIRVKIVIDDERALDKI-----ERKLIRSRGDSAT----QIEIALKDAYKRLLFPALSNE 281
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
S A + + K L + P K R+LA PG +
Sbjct: 282 RLSEAKKTADETAIQVFAKNLKQLLLGSPLGEK------------RILA--LDPGFRTGC 327
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
V LD+ G++ L ++ + K +D+ + K + + A+
Sbjct: 328 KLVCLDAQGQL----------LHNETIYPHAPKNDDKGAIKKISSLTDAYKIEAIAIGNG 377
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S + E + K + H + + + E+ +Y S+I+ D+ P V
Sbjct: 378 TASRET---ERLVKRI--------HFKNAMEVFVVSEAGASIYSASKIARDEFPNYDVTV 426
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ AV++GR LQ+PLA + + G G+ L+ L +Q + +
Sbjct: 427 RGAVSIGRRLQDPLAELVKIDAKSIGVGQYQHDVDQTALQKSL---------DQTVENCV 477
Query: 650 NQVGLDINLAIHREWQFAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKK 708
N VG++IN A APL ++SG+GP+ A + R G TR++ LG K
Sbjct: 478 NAVGVNINTA------SAPLLSYVSGIGPKLAEGVVRFRESEGPFKTRQEIKKVPRLGGK 531
Query: 709 VFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
FV A GFLR+ + LD++ +HPE Y L +AK+
Sbjct: 532 AFVQAAGFLRITGAENP---------LDNSSVHPERYKLVASIAKD 568
>gi|336429353|ref|ZP_08609320.1| hypothetical protein HMPREF0994_05326 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002964|gb|EGN33061.1| hypothetical protein HMPREF0994_05326 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 798
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 125/551 (22%), Positives = 232/551 (42%), Gaps = 96/551 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ S + GL +A G L+ E G+ LE KE + ++
Sbjct: 107 RPKRRTRASVAKEKGLDGLA----------GFILAQE-TGEPLE--KEAAKYVSDEKGV- 152
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPTPDGDSAIDSFHQFA 327
S+ LQGA+ + A IS E R Y+R+I F + ++ST S + ++ +
Sbjct: 153 --ESAADALQGAKDIIAEAISDEADYRIYIRNITFEEGKIISTAKDEKAASVYEMYYSY- 209
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
E+P++K + L + + E+EK L V I+ PE+ + + ++K
Sbjct: 210 ------EEPVKKAAGHRILALNRGEKEKFLTVKIEAPEERILRFLE-------KKVITKE 256
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
+ + + D+ + + P++ +E R+ ++ +A+ + +GK L + P K
Sbjct: 257 NPITGPVLQEVAADSYNRLIAPAIEREIRNDLTEKAEDGAISVFGKNLEQLLMQPPIAGK 316
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQ 504
+ W P + ++D++G+V+D V++ QN +
Sbjct: 317 --------------VVLGWDPAFRTGCKLAVVDATGKVLDTKVIYPTA----PQN--KVE 356
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
K + +RL+K + + L +V S + + +II +++E V +
Sbjct: 357 EAKAELKRLIK------KYGISLISVGNGTASRESE--QIIVDLIKELDVPVQY------ 402
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREI 620
+ +E+ +Y S++++++ P + A ++ R LQ+PLA + + G G+
Sbjct: 403 -IIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLAELVKIDPKSIGVGQYQ 461
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
L L G++E D N+VG+D+N A + L++ISG+ A
Sbjct: 462 HDMNQKKLGEALN-----GVVE----DCVNRVGVDLNTA-----SASLLEYISGISKTIA 507
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ G RK + LG K F GF+R+ LD T +
Sbjct: 508 KNIVDYREANGRFTNRKQLLKVAKLGPKAFEQCAGFMRITDGDNP---------LDATSV 558
Query: 741 HPESYGLAQEL 751
HPESY +L
Sbjct: 559 HPESYEATMKL 569
>gi|298244158|ref|ZP_06967964.1| Tex-like protein [Ktedonobacter racemifer DSM 44963]
gi|297551639|gb|EFH85504.1| Tex-like protein [Ktedonobacter racemifer DSM 44963]
Length = 773
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 158/712 (22%), Positives = 285/712 (40%), Gaps = 139/712 (19%)
Query: 49 SPKE-----GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNND 103
SP+E +L++ R + R L LL + IPFIA YRKE SL +EV
Sbjct: 23 SPQEIAAQLSSELNLQRGQVERTLGLLD-EGNTIPFIARYRKEVTGSL------DEVQ-- 73
Query: 104 NNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLAL 163
+ AI D R ++L++ ++++ ++ RR+ D
Sbjct: 74 ----------------IQAIAD----------RAASLRALHERK--QDVRRLIDG----- 100
Query: 164 NQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAG 223
+L ++ ++E A T + V+D+ L + R KR T+ S + G
Sbjct: 101 QGKLTPELAAAIEEATTLQAVEDLYLPY-----------------RQKRKTRASVAREKG 143
Query: 224 LWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM--FNSSQAVLQGAR 281
L +A E G D + EE A+ F A ++S GA
Sbjct: 144 LAPLAEIILQQPEISG-------------DVETILEEHAAPFLNAEKGVDTSLEAFAGAA 190
Query: 282 HMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFE 341
+ A I + VR VR+ + + + T + + + + + + K
Sbjct: 191 DIVAEMIVEDASVRGDVRAAYFKQSSLKTKALDEEELKAKDPQGVYQLYYDFNEDVTKLV 250
Query: 342 DAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKD 401
+ L + +AE E +L+V + L + + + HY + S + E ++D
Sbjct: 251 PHRVLALNRAEREGILRVGVNL---AYEQAKGEITRHYPARATSP----FQRTLEEAMED 303
Query: 402 ALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRV 461
L P+M +E R ++ +A++ + + L N + P + K
Sbjct: 304 GYKRLLAPAMEREVRVELTKKAEAHAIHIFAANLRNLLLQPPLRGK-------------- 349
Query: 462 LACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMM-D 519
+ PG + ++D +G+ L S V Q +K +R+L M+
Sbjct: 350 MVLGLDPGYRTGCKVTLVDETGKY----------LLSDTVYLHQEEK--AKRVLHDMLVK 397
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
HQ VV +G N + + + + + +EE G E+ V +E+ +Y S
Sbjct: 398 HQVKVVAIG--NGTASRETEQLVASVIGTIEEERGQHG----EIGYVLVNEAGASVYSAS 451
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
+ ++ P + +++ R LQ+PLA + + + + ++ + E
Sbjct: 452 EAAREEFPTLDATQRGTISIARRLQDPLAELVKIDPKAVGVGLY-----QHDVDQKELAE 506
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
M+++V+V N G+++N A A L+ +SG+ R A ++ + G +R +
Sbjct: 507 MLDRVVVSCVNFAGVEVNSA-----SSALLKHVSGINTRVANAIVKHREAHGPFKSRDEL 561
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
GLG FV A GFL++ G A +D LD+T IHPESY A+ L
Sbjct: 562 KKVSGLGPATFVQAAGFLKI---GNA------VDSLDNTFIHPESYEAARAL 604
>gi|345867399|ref|ZP_08819410.1| S1 RNA binding domain protein [Bizionia argentinensis JUB59]
gi|344048067|gb|EGV43680.1| S1 RNA binding domain protein [Bizionia argentinensis JUB59]
Length = 722
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 138/626 (22%), Positives = 250/626 (39%), Gaps = 126/626 (20%)
Query: 144 YKKRYEEESRRIYDETRLALNQQLFD-SISKSLEAAETEREVDDVDLKFNLHFPPGEVGV 202
YK+++E +R + ++Q++ + K +EA + ++D+ L F
Sbjct: 71 YKEQFETLEKRKTTILKALVDQEVLTPELQKKIEATQDLTTLEDIYLPF----------- 119
Query: 203 DEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMA 262
+ R TK + K GL +A M D E +A
Sbjct: 120 ------KKSRKTKAETARKNGLEPLAKII---------------MSQNTSDI----ESVA 154
Query: 263 SNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTPDGDSAI 320
S + NS + L+GARH+ + ++ VR +R A++ST + D
Sbjct: 155 SRYIKGDINSVEDALEGARHIISEWVNERTDVRNNIRQQLERFAMISTKVVKSKKDDDNA 214
Query: 321 DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP-EDSLNKLFSDCKEHY 379
F + +W E+ L + + L I +AE+E ++V I + E +L+K+
Sbjct: 215 QKFRDY--FEW--EETLSRIPSHRLLAILRAEKEGFIKVKIAIDNERALDKI-------- 262
Query: 380 LSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKV 439
D + +S +Q +L ++DA L PS+ EA +A + + + K L +
Sbjct: 263 -EDRIIRSQGDCAEQIQLAIQDAYKRLLFPSLSNEALQNAREKADADAINVFAKNLKQLL 321
Query: 440 SVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
P K RVLA PG + V LD+ G
Sbjct: 322 LGSPLGEK------------RVLAI--DPGFRSGCKIVCLDAQG---------------- 351
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEI---------IFKMV 549
N++ ++ + H P +GA+ SL + Y+I +
Sbjct: 352 NLKHNET-----------IYPHPPKSDAIGAMK-KIGSLAEA-YKIEAIAIGNGTASRET 398
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
E R + H ++L + E+ +Y S+I+ D+ P V+ +V++GR LQ+PLA
Sbjct: 399 EALIRKI-HFKNDLQVFVVSEAGASIYSASKIARDEFPNYDVTVRGSVSIGRRLQDPLAE 457
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
+ + + ++ + L + ++ V+ N VG++IN A + L
Sbjct: 458 LVKIDAKSIGVGQYQHDVDQTKLKSE-----LDTVVESCVNSVGVNINTA-----SISLL 507
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
++SG+GP+ A ++ G +R LG K F FLR++ +
Sbjct: 508 SYVSGIGPKIAENIVNFRSEKGVFNSRSAIKKVPRLGDKAFEQGAAFLRIKDAKNP---- 563
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEV 755
LDD+ +HPESY + +++AK++
Sbjct: 564 -----LDDSAVHPESYAIVEQMAKDL 584
>gi|319902565|ref|YP_004162293.1| Tex-like protein [Bacteroides helcogenes P 36-108]
gi|319417596|gb|ADV44707.1| Tex-like protein [Bacteroides helcogenes P 36-108]
Length = 713
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 144/629 (22%), Positives = 251/629 (39%), Gaps = 125/629 (19%)
Query: 139 ALQSYYKKRYEEESRRIYDETRLALNQQ---LFDSISKSLEAAETEREVDDVDLKFNLHF 195
A+Q+ Y+K E R+ ET L+ Q+ L D + K ++ ++D+ L +
Sbjct: 54 AIQTQYEKLNETAKRK---ETILSTIQEQGKLTDELRKRIDETWENTTLEDIYLPY---- 106
Query: 196 PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
+PKR T+ + + GL +A E
Sbjct: 107 -------------KPKRKTRAEAARQKGLEPLADLLRLQQE------------------- 134
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF----MDNAVVSTC 311
+ PE AS F S + LQGAR + A IS + VRK R F NA V
Sbjct: 135 DNPEACASAFVKGDVKSVEEALQGARDIMAERISEDSEVRKCARYSFDHWGTLNAKVING 194
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP-EDSLNK 370
+ D F +PL+K + L I++ E E LL+V+I E++L +
Sbjct: 195 KEEEAAKYRDYFDC--------HEPLKKCSSHRLLAIRRGETEGLLRVSITSDDENTLER 246
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
L + H + S+ L ++DA + P++ E + RA +
Sbjct: 247 LQRRFQRH--RNACSQHIGLA-------VEDAYKRLVRPAIETEFANQSKERADEEAIRV 297
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLF 489
+ + L + P +K RV+ PG + V LD+ G +
Sbjct: 298 FAENLRQLLLAPPLGQK------------RVMG--IDPGFRTGCKVVCLDAQGNL----- 338
Query: 490 TGCLTLRSQNVRDQQSKKNDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
L ++N+ +E +L K M ++ + +G N + + +D F
Sbjct: 339 -----LHNENIYPHPPVNKGKEAFSKLQKMMEAYKIDAIAIG--NGTASRETED-----F 386
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
+ R+V + E +Y S+I+ D+ P V+ AV++GR L +P
Sbjct: 387 LKRQSFNREV-------QVFIVSEQGASIYSASKIARDEFPEYDVTVRGAVSIGRRLMDP 439
Query: 607 LAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
LA + + + S + ++ + + ++Q + + N VG+++N A
Sbjct: 440 LAELVKI-----DPKSIGVGQYQHDVDQTKLKKSLDQTVENCVNLVGVNLNTASSH---- 490
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
L +ISGLGP+ A ++ GA +RK+ + +G K F GFLR+ +
Sbjct: 491 -LLTYISGLGPQLAQNIVNYRAENGAFTSRKELMKVPRMGAKAFEQCAGFLRIPDAKNP- 548
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LD+T +HPESY + +++AK++
Sbjct: 549 --------LDNTAVHPESYCIVEQMAKDL 569
>gi|270293991|ref|ZP_06200193.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270275458|gb|EFA21318.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 711
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 127/552 (23%), Positives = 222/552 (40%), Gaps = 94/552 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L L++ +P PEE A+++
Sbjct: 107 KPKRKTRAEAARQKGL-----------EPLATLLMLQR------EPH--PEERAASYVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ + L+GAR + A +S + R VR+ F ++ + + +
Sbjct: 148 DVKNVEDALKGARDIIAEHVSEDERARNSVRNAFARQGTLTAKVVKGKEEEATKYRDYFD 207
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ L++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 208 CS----ESLKRCSSHRLLAIRRAEAEGLLKVSIS-PDDE------ECVER-LERQFVRSN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
Q ++D+ L PS+ E + RA + + + L + P +K
Sbjct: 256 NPCGQQVAEAVQDSYKRLLKPSIETEFATQSKERADEEAIKVFAENLRQLLLASPLGQK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + V LD+ G + L ++N+
Sbjct: 315 -----------RVMG--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVS 351
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E K M + + + AV + + + E F + RD+ I
Sbjct: 352 KQKEAFAKLQMMIESYKI--DAVAIGNGTASRETEE--FLKHQRFNRDI-------QIFI 400
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSW 623
E +Y S+I+ D+ P V+ AV++GR L +PLA + + G G+
Sbjct: 401 VSEQGASIYSASKIARDEFPDYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDV 460
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
L+ L +Q + + N VG+++N A L +ISGLGP+ A ++
Sbjct: 461 DQTKLKKSL---------DQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQLAQNI 506
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
GA +RK+ + +G K F GFLR+ Q + LD+T +HPE
Sbjct: 507 VNYRAENGAFTSRKELMKVPRMGAKAFEQCAGFLRI---------PQAKNPLDNTAVHPE 557
Query: 744 SYGLAQELAKEV 755
SY + +++AK++
Sbjct: 558 SYCIVEQMAKDL 569
>gi|95931126|ref|ZP_01313851.1| RNA binding S1 [Desulfuromonas acetoxidans DSM 684]
gi|95132816|gb|EAT14490.1| RNA binding S1 [Desulfuromonas acetoxidans DSM 684]
Length = 747
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 145/682 (21%), Positives = 290/682 (42%), Gaps = 110/682 (16%)
Query: 243 SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF 302
++E++ D+L D + E+A A L+GA + A +I+ + +R VR +
Sbjct: 167 AIEQLADQLADQHD---ELADG---------AAALKGAGDILAEQINEQAVIRARVRHLT 214
Query: 303 MDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK 362
+ V+ + + + + + + +PL++ + L +++ E E++L++T++
Sbjct: 215 WQHGVLVSRVAANYANKPSKYESY----YEASEPLKQIPSHRMLALRRGEGEEVLRLTLE 270
Query: 363 LPEDSLNK----LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSL 418
P D + K LF+ + W + ++ DA D L PS+ E R
Sbjct: 271 TPRDEILKEIARLFAAPRRSP-----------WQEFFTSVVADAYDRLLAPSIEVELRLE 319
Query: 419 MSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVM 477
A+ + + L + V + P AA V+ PG + + +
Sbjct: 320 AKKIAEEAAIAVFADNLRH-VLLAP-------------AAGEVVVLGIDPGLRTGSKLAV 365
Query: 478 LDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
+ ++G +D +T+ + QQ + + Q + + + +V +G + T
Sbjct: 366 VSATGAFLD-----HVTIYPHTQKAQQPQFSRQ--ISALIEKYAVEMVAVG----NGTGG 414
Query: 538 KDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAV 597
++ + + V + RD H +V +E+ +Y S I+ ++ P V+ A+
Sbjct: 415 RE-----MEQFVRQSLRDYDHSC---PVVMVNEAGASVYSASEIAREEFPDLDITVRGAI 466
Query: 598 ALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDIN 657
++ R LQ+PLA + + + S + ++ + ++ V+ N VG D+N
Sbjct: 467 SIARRLQDPLAELVKI-----DPKSIGVGQYQHDVNQRALKQALDAVVESCVNYVGGDLN 521
Query: 658 LAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFL 717
A A L ++SG+GP A ++ R + G R D + LG K + A GFL
Sbjct: 522 TA-----SAALLGYVSGIGPTLAKAIARERDQRGGFVRRCDLLDVPRLGAKAYEQAAGFL 576
Query: 718 RVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEH 777
RV+ + LD++ +HPE+Y L +++A DL D +L A +
Sbjct: 577 RVKGAHP----------LDNSAVHPENYALVEQMA---------ADLAMDVASLIGAADK 617
Query: 778 VRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMIS 837
++ R D L+ Y+ D E TL IR EL+ +D R Q++ S ++ +S
Sbjct: 618 IK-RLD-LQRYVCD--------EVGLPTLRDIRDELLKPGRDPRRQFETASFRDDVQEMS 667
Query: 838 GETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDI 897
L G V+Q +V V A + G++ + +D + + ++ + G +
Sbjct: 668 -----DLQPGMVLQGSVTNVAAFGAFVDIGVHQDGLVHISELADRFVKNP-AEIVKVGQV 721
Query: 898 LTCKIKSIQKNRYQVFLVCRES 919
+ K+ S+ R ++ L +++
Sbjct: 722 VHVKVLSVDTTRKRISLSIKQA 743
>gi|414161628|ref|ZP_11417883.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus simulans ACS-120-V-Sch1]
gi|410875438|gb|EKS23357.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus simulans ACS-120-V-Sch1]
Length = 716
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/503 (21%), Positives = 210/503 (41%), Gaps = 71/503 (14%)
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
++P+ A F S+ L GA+ + A +S P R + + ++++
Sbjct: 136 QSPKTYAEAFLNEEVTSAADALAGAQDIIAEWVSDNPKYRNKILTQTQKRGLITSQKKKK 195
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+ ++ + + +P+ K + + L + + E+EK+L V I++ DSL + +
Sbjct: 196 AEDEKKTYEMY----YEFSEPIHKIANHRILAMNRGEKEKVLSVKIEMDTDSLEREIARQ 251
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ +G + E +KD++ ++PS+ +E R+ ++ +A++ + + L
Sbjct: 252 EIKGQHEGTTYI--------EAAIKDSMKRLIMPSIEREIRTDLTTKAENHAIDVFSVNL 303
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTL 495
+ + P + K + A R C P TF+ G +
Sbjct: 304 KHLLLQPPLKGKQ---ILGVDPAFRT-GCKLAVINPYGTFIA------------KGVMYP 347
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ Q++K L+F+ D+ +V +G S + + + ++++H D
Sbjct: 348 HPPVSKTAQAEKT----FLQFINDYDVKLVAIGNGTAS-----RETEQFVADLIQKHNLD 398
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL-- 613
V + +E+ +Y S I+ + P + + AV++GR +Q+PL+ + +
Sbjct: 399 V-------QFIIVNEAGASVYSASEIARTEFPDFQVEERSAVSIGRRVQDPLSELVKIDP 451
Query: 614 --CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
G G+ LEN L V+ NQVG+D+N A + LQ
Sbjct: 452 KSIGVGQYQHDVNQKALENALNF---------VVETAVNQVGVDVNTASR-----SLLQH 497
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+SGL P+ A ++ G I K LG K F ++GFLR+ +
Sbjct: 498 VSGLSPQIAQNIIDYREENGVINHHKQIAKVKRLGPKTFEQSIGFLRIVNGKEP------ 551
Query: 732 IDLLDDTRIHPESYGLAQELAKE 754
LD+T IHPESY +A +L ++
Sbjct: 552 ---LDNTSIHPESYAIAYQLLEQ 571
>gi|189425601|ref|YP_001952778.1| RNA binding S1 domain-containing protein [Geobacter lovleyi SZ]
gi|189421860|gb|ACD96258.1| RNA binding S1 domain protein [Geobacter lovleyi SZ]
Length = 762
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 141/652 (21%), Positives = 267/652 (40%), Gaps = 111/652 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR TK + + GL +A ++++L +LE ++ KE P
Sbjct: 113 KPKRRTKATIAKERGLEPLADLM--AAQELTSGSALEAAAPFVDHEKEVP---------- 160
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ + L+GA H+ A ++ + R VR + + V+ T D + F +
Sbjct: 161 ---TPETALEGAGHILAERLADDADCRAMVRRLTWEQGVMVTKVASDKKEQVTKFEMY-- 215
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ ++PL++ + L +++ E+E++L++++++P+ ++ + K H L G S
Sbjct: 216 --YDYQEPLKEIPSHRMLAMRRGEKEEVLRLSLQVPQ---AEILAGLK-HRLIKGES--- 266
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ-RK 447
++ E + +DA + S+ E R A + + K L N + P R+
Sbjct: 267 -VFKPWLESVAEDAYKRLIATSIEVELRLQAKDLADEAAIAIFAKNLKNLLLAPPAGGRR 325
Query: 448 DNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
I P A ++ A D +G F +T+ + +
Sbjct: 326 VLGIDPGLRAGSKLAAV--------------DQTGR-----FLEHVTIYPHT----GAGR 362
Query: 508 NDQER--LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
DQ R LL+ + H ++ +G + T+ ++ E+ K + L +
Sbjct: 363 VDQARADLLRLVEAHGIEMIAIG----NGTAGRE--MELFTK------ETLAKAGKHLPV 410
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREIL 621
V E+ +Y S I+ ++ P V+ A+++ R LQ+PLA + + G G+
Sbjct: 411 VMVSEAGASIYSASEIAREEFPELDLTVRGAISIARRLQDPLAELVKVDPKSIGVGQYQH 470
Query: 622 SWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAA 681
L+ L ++V+ N VG+D+N A W A L +++G+GP
Sbjct: 471 DVNQAMLKKSL---------DEVVESGVNYVGVDLNTA---SW--ALLSYVAGVGPALGK 516
Query: 682 SLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIH 741
++ R G +RK + G K F A GFLR+R LD++ +H
Sbjct: 517 AIARHRDENGPFSSRKGLLKVSRFGAKAFEQAAGFLRIRGGKHP---------LDNSAVH 567
Query: 742 PESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKREN 801
PE Y L +++AK+ L +++E + P L + L +++ + +
Sbjct: 568 PERYPLVEQMAKD----------------LGVSLEELAKTPALAEKIDLKKYVSD---QV 608
Query: 802 KRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQAT 853
TL I EL +D R Q++ ++ IS E + +G V T
Sbjct: 609 GLPTLRDILEELKKPGRDPRQQFQTADFRDDIREISDLQEGMILQGVVTNVT 660
>gi|402554166|ref|YP_006595437.1| S1 RNA-binding domain-containing protein [Bacillus cereus FRI-35]
gi|401795376|gb|AFQ09235.1| S1 RNA-binding domain-containing protein [Bacillus cereus FRI-35]
Length = 722
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 208/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAIEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSAV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YSYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ L ++D + PS+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIRDNDSKSAQYVK----LAIEDGYKRLIQPSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKEK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|172038374|ref|YP_001804875.1| RNA binding S1 protein [Cyanothece sp. ATCC 51142]
gi|354554279|ref|ZP_08973584.1| Tex-like protein [Cyanothece sp. ATCC 51472]
gi|171699828|gb|ACB52809.1| probable RNA binding S1 protein [Cyanothece sp. ATCC 51142]
gi|353553958|gb|EHC23349.1| Tex-like protein [Cyanothece sp. ATCC 51472]
Length = 718
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 155/709 (21%), Positives = 288/709 (40%), Gaps = 149/709 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+LS+ R + L+LL ++ +PFIA YRKE+ SL D+ +
Sbjct: 12 ELSLRRQQVKNTLELL-IEGATVPFIARYRKEKTGSL--------------DETQ----- 51
Query: 115 KWHKVLWAIHDLDKKWLLL---QKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSI 171
I D+ +++ L +KRK + K + +L D +
Sbjct: 52 --------IRDIGERYTYLTELEKRKETILESIKSQ-----------------DKLTDQL 86
Query: 172 SKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKF 231
+ +E+ ++ E++D L+ P YK PKR TK + + GL ++A
Sbjct: 87 QQKIESCLSKTELED------LYLP----------YK-PKRRTKATIAREKGLDKLAEFI 129
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
+ SLE++ +E S K N+ + LQGA + A E + +
Sbjct: 130 KSLNHPNAKPQSLERLA----------QESISTEKGV--NTIEEALQGASDILAEETAEK 177
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPD---GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLI 348
+R Y+R M ++ + D G + + + F + + K L +
Sbjct: 178 ANLRTYLRDYLMKESIFISKIKKDYSEGSTKYEMYRDF-------QASVTKIAPHNVLAL 230
Query: 349 QKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA-QLWNDQRELILKDALDNFL 407
+ E EK++ + I E N + S YL + K+ +L + +LKD+ + +
Sbjct: 231 FRGEAEKIISLEIDFDE---NFVLS-----YLENQEIKTKNKLIRTFYQEMLKDSFNRLI 282
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
PS+++E R+ K W +E ++ ++ ++P P
Sbjct: 283 KPSLLREVRA----DRKHWADIE-------SINTFEINLRELLLSPPAGMQP---TLAID 328
Query: 468 PG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
PG + V+L +G+ ++ + +N Q+ KN E+L+K + H+ +
Sbjct: 329 PGFRTGCKVVILSETGQFLE--YQAIFPHSGEN--KQKKAKNVLEKLIK-----KYHIKL 379
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQL 586
+ N + + D + +E P V IV +ES +Y S ++ ++
Sbjct: 380 IAIGNGTASRETDQFVADVINPLENKPIKV--------IV--NESGASIYSASDLAREEF 429
Query: 587 PGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMV 646
P V+ A+++GR LQ+PLA + + + ++ + L + +E+ +
Sbjct: 430 PNLDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKN-----LEETVE 484
Query: 647 DVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLG 706
N VG+D+N A + L F+SG+ A ++ + G RK+ + LG
Sbjct: 485 SCVNYVGVDLNTASKQ-----LLIFVSGITSTIANNIVSYRDKNGKFKDRKELLKVSKLG 539
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
K F A GFLR+R LD+T +HPESY + + + K++
Sbjct: 540 PKAFEQAAGFLRIRGGKNP---------LDNTAVHPESYAVVEMIMKQL 579
>gi|167039140|ref|YP_001662125.1| RNA-binding S1 domain-containing protein [Thermoanaerobacter sp.
X514]
gi|300913270|ref|ZP_07130587.1| Tex-like protein [Thermoanaerobacter sp. X561]
gi|307723716|ref|YP_003903467.1| Tex-like protein [Thermoanaerobacter sp. X513]
gi|166853380|gb|ABY91789.1| RNA binding S1 domain protein [Thermoanaerobacter sp. X514]
gi|300889955|gb|EFK85100.1| Tex-like protein [Thermoanaerobacter sp. X561]
gi|307580777|gb|ADN54176.1| Tex-like protein protein-like protein [Thermoanaerobacter sp. X513]
Length = 712
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 172/850 (20%), Positives = 347/850 (40%), Gaps = 184/850 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N ++ L + +L++K
Sbjct: 32 IPFIARYRKEATGSLSDEVLRN-----------------FYDRLTYLRNLEEK------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++++ R+ DE +L + I +E A T +EV+D+ F
Sbjct: 68 ------------KQDTIRLIDE-----QGKLTEEIKAKIENATTLQEVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A + G
Sbjct: 106 ------------RPKRRTRATIAKEKGLEPLAKVISSNDVTDG----------------- 136
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A + + + QGA + A +IS + +RKY+RS +N ++ T +
Sbjct: 137 DVEEYAKPYLNENVPTVEEAYQGAMDIIAEDISDDADIRKYIRSFTWNNGIIVTQALKED 196
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDC 375
S + ++ + ++ ++ + L I +AE EK + V I++ E +N+L
Sbjct: 197 RSPYEMYYDY-------KEAVKTIPPHRILAINRAEREKYISVKIEIDSERIINRL---- 245
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ V+K A ++ + + ++D+ + PS+ +E R+ ++ +A+ ++ + + L
Sbjct: 246 ----IESKVNK-ASIFAEYYKKAIEDSYKRLIAPSIEREIRNALTEKAEEKAIIVFKENL 300
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ + P + + + P + ++D +G+++D T
Sbjct: 301 KSLLLQPPIKGH--------------VVMGFDPAYRTGCKIAVVDETGKLLD-------T 339
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
Q +N ++ L + + + ++ LG S + +++ I ++++E R
Sbjct: 340 ATVYPTPPQNDFENSKKVLKELIEKYNVTLIALGN---GTASRESEMF--IAELIKELSR 394
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
+V + V +E+ +Y S+I +++ P +++ A++L R LQ+PLA + +
Sbjct: 395 EVKY-------VIVNEAGASVYSASQIGTEEFPDINVSLRGAISLARRLQDPLAELVKID 447
Query: 614 ---CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G+ ++ KL D G++E D N VG+D+N A +
Sbjct: 448 PKSIGVGQYQHDVDQKKLG--------DALNGVVE----DCVNSVGVDLNTA-----SVS 490
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L+++SG+ A ++ + G R+ LG F GFLR+
Sbjct: 491 LLKYVSGINAAIAKNIVEYRNQIGKFTNREQLKNVKRLGDTTFTQCAGFLRILDGD---- 546
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
++ D T +HPE Y ++L ++ Y ++ ++ + ++D + L+
Sbjct: 547 -----NIFDSTAVHPERYETLEKLLRKFRYEKE------------KLDRKKLKDFANSLE 589
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
Y L++ +E + TLY I EL +D R +P + I + L
Sbjct: 590 EYGLEKISEE--YDIGLPTLYDIVSELKKPGRDPREDLPKPILRSDVMTI-----NELKP 642
Query: 847 GRVVQATVRRVQGQRAICVLESGLA--GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
G + TVR V C ++ G+ G++ + S ++ L D + GDI+ ++ S
Sbjct: 643 GMELMGTVRNVTDFG--CFVDIGVHTDGLVHISEMSQNYIKHPL-DVVSVGDIVKVRVLS 699
Query: 905 IQKNRYQVFL 914
+ R ++ L
Sbjct: 700 VDIERNRISL 709
>gi|289577757|ref|YP_003476384.1| Tex-like protein [Thermoanaerobacter italicus Ab9]
gi|289527470|gb|ADD01822.1| Tex-like protein [Thermoanaerobacter italicus Ab9]
Length = 712
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 179/850 (21%), Positives = 353/850 (41%), Gaps = 184/850 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N +++ L + +L++K
Sbjct: 32 IPFIARYRKEATGSLSDEVLRN-----------------FYERLTYLRNLEEK------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++++ R+ DE +L + I + ++ A T +EV+D+ F
Sbjct: 68 ------------KQDTIRLIDE-----QGKLTEEIKEKIDNATTLQEVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A K S+E + GD
Sbjct: 106 ------------RPKRRTRATIAKEKGLEPLA-KIISSNEVID--------GD------- 137
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+E A + + + QGA + A +IS + +RKY+R+ +N ++ T
Sbjct: 138 -VKEYAKPYLNENVLTVEEAYQGAMDIIAEDISDDAEIRKYIRNFTWNNGIIVTQALKKE 196
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDC 375
S + ++ + ++ ++ + L I +AE EK + V I++ E +N+L
Sbjct: 197 KSPYEMYYDY-------KEAVKTIPPHRILAINRAEREKYISVKIEVDSERIINRL---- 245
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ V+K A ++ + + ++D+ + PS+ +E R+ ++ +A+ ++ + + L
Sbjct: 246 ----IESKVNK-ASIFAEYYKRAIEDSYKRLIAPSIEREIRNALTEKAEEKAIIVFKENL 300
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ + P + + + P + ++D +G+++D
Sbjct: 301 KSLLLQPPIKGH--------------VVMGFDPAYRTGCKIAIVDETGKLLDT--ATIYP 344
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
QN D K +LK +++ + V L A+ S + +++ I +++E R
Sbjct: 345 TPPQNDIDNSKK------VLKELIEK--YNVTLIALGNGTASRESEMF--IADLIKELSR 394
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
+V + V +E+ +Y S I +++ P +++ A++L R LQ+PLA + +
Sbjct: 395 EVKY-------VIVNEAGASVYSASPIGTEEFPDINVSLRGAISLARRLQDPLAELVKID 447
Query: 614 ---CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G+ ++ KL N G++E D N VG+D+N A +
Sbjct: 448 PKSIGVGQYQHDVDQKKLGEALN--------GVVE----DCVNSVGVDLNTA-----SVS 490
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L+++SG+ A ++ + G +R+ LG+ F GFLR+
Sbjct: 491 LLKYVSGINTVIAKNIVEYRNQIGKFTSREQLKNVKRLGEATFTQCAGFLRILEGD---- 546
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
++ D T +HPE Y ++L K+ Y ++ ++ + ++D + L+
Sbjct: 547 -----NIFDSTAVHPERYETLEKLLKKFGYKKE------------KLDRKKLKDFANSLE 589
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
Y L+R +E + TLY I EL +D R +P + I + L
Sbjct: 590 EYGLERISEE--YDIGLPTLYDIVSELKKPGRDPREDLPKPVLRSDVMTI-----NELKP 642
Query: 847 GRVVQATVRRVQGQRAICVLESGLA--GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
G + TVR V C ++ G+ G++ + S + L D + GDI+ K+ S
Sbjct: 643 GMELMGTVRNVTDFG--CFVDIGVHTDGLVHISEMSQSYIKHPL-DVVAVGDIVKVKVLS 699
Query: 905 IQKNRYQVFL 914
+ R ++ L
Sbjct: 700 VDLERNRISL 709
>gi|73662124|ref|YP_300905.1| RNA binding protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494639|dbj|BAE17960.1| putative RNA binding protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 716
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 220/506 (43%), Gaps = 81/506 (16%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR-KYVRSIFMDNAVVSTCPTPDGD 317
E A F S + ++GA+ + A +S +P R K ++ F ++ T
Sbjct: 139 ETKAQQFINDEVTSVEDAIKGAQDIIAEIVSDKPIYRSKILKDTFQQGNII----TQKKK 194
Query: 318 SAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKE 377
A D F+ + + +P++K + + L + + E+EK+L V I++ + E
Sbjct: 195 HAEDEKEIFS-MYYDYTEPIKKIANHRVLAVNRGEKEKVLSVKIEMDIQGI--------E 245
Query: 378 HYLSDGVSKSAQLWNDQRELIL---KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
+++ SK ++ +I+ KD+L ++PS+ +E RS ++ +A++ + + +
Sbjct: 246 NFIR---SKEISSEHNGTYVIIDAIKDSLKRLIMPSIEREIRSDLTEKAENHAIDVFSEN 302
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLT 494
L N + P + K + A R C P TFV + G V++
Sbjct: 303 LRNLLLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFV---AKG----VMYPHPPV 351
Query: 495 LRSQNVRDQQSKKNDQERL-LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
+KK D E++ + F+ + ++ +G S + + + M++EH
Sbjct: 352 ----------NKKEDAEKIFVDFVKTYDVELIAIGNGTASRET-----EQFVASMIQEHQ 396
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
+V + +E+ +Y S ++ ++ P + + AV++GR +Q+PL+ + +
Sbjct: 397 LNV-------QFIIVNEAGASVYSASEVARNEFPDFQVEERSAVSIGRRVQDPLSELVKI 449
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ LE G + V+ NQVG+D+N A + L
Sbjct: 450 DPKSIGVGQYQHDVNQKSLE---------GALSFVVETAVNQVGVDVNTASR-----SLL 495
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
Q++SGL P A ++ GAI K+ LG K F ++GF+R+ +
Sbjct: 496 QYVSGLTPTIAQNIIDYREENGAITHNKEIAKVKRLGAKTFEQSIGFMRIVGGKEP---- 551
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEV 755
LD+T IHPESY +A +L E+
Sbjct: 552 -----LDNTSIHPESYNVANQLLTEI 572
>gi|424842719|ref|ZP_18267344.1| transcriptional accessory protein [Saprospira grandis DSM 2844]
gi|395320917|gb|EJF53838.1| transcriptional accessory protein [Saprospira grandis DSM 2844]
Length = 705
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 207/485 (42%), Gaps = 74/485 (15%)
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP 336
L+GAR + A I+ + R VR + A + + + + ++P
Sbjct: 152 LEGARDIIAERINQDETARATVRQHYQKRARFKAEVVAGKEEEAQKYKNY----FELDRP 207
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPED-SLNKLFSDCKEHYLSDGVSKSAQLWNDQR 395
L++ + Q L + +AE+E LL+V + ED LN L D W +Q
Sbjct: 208 LKQLQAHQILAVLRAEKEGLLKVQLAPNEDYVLNDLCGQFIRRSCPDR-------WAEQL 260
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDE 455
++ ++DA + PS+ E +A + + L + P K
Sbjct: 261 DMAIEDAYKRLMKPSISNEFVKQAKAQADLASIQIFADNLRQLLLASPLGNK-------- 312
Query: 456 EAAPRVLACCWGPGKPE-TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLL 514
R++A PG V L ++GE+++ + R+++ + D +L
Sbjct: 313 ----RMMAI--DPGYASGCKLVCLSATGELLE-----DTVIYPTPPRNRKFQATDT--VL 359
Query: 515 KFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPR 574
+ H+ + +G + T+ ++ E+ R++ E +I +ES
Sbjct: 360 DLIEKHRIEAIAIG----NGTAGRE---------TEQFIRELPFEGIAPTIFLVNESGAS 406
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLEN 630
+Y S I+ + P + V+ AV++GR L +PLA + + G G+ L+N
Sbjct: 407 IYSASEIARQEFPDKDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQKQLQN 466
Query: 631 FLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA 690
K G + + V N VG+D+N A E+ L ++SGLGP A ++
Sbjct: 467 ------KLGAVVESCV---NAVGVDLNTA--SEYL---LTYVSGLGPALARNIVDYRRSK 512
Query: 691 GAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQE 750
GA +R++ + LG+K F A GFLR+R+ I LD+T +HPE+Y + ++
Sbjct: 513 GAFKSRQELRSVKRLGEKAFEQAAGFLRIRKG---------IHPLDNTGVHPEAYPIVEQ 563
Query: 751 LAKEV 755
+AK++
Sbjct: 564 MAKDL 568
>gi|418575603|ref|ZP_13139753.1| putative RNA binding protein [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379326005|gb|EHY93133.1| putative RNA binding protein [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 716
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 220/506 (43%), Gaps = 81/506 (16%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR-KYVRSIFMDNAVVSTCPTPDGD 317
E A F S + ++GA+ + A +S +P R K ++ F ++ T
Sbjct: 139 ETKAQQFINDEVTSVEDAIKGAQDIIAEIVSDKPIYRSKILKDTFQQGNII----TQKKK 194
Query: 318 SAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKE 377
A D F+ + + +P++K + + L + + E+EK+L V I++ + E
Sbjct: 195 YAEDEKEIFS-MYYDYTEPIKKIANHRVLAVNRGEKEKVLSVKIEMNIQGI--------E 245
Query: 378 HYLSDGVSKSAQLWNDQRELIL---KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
+++ SK ++ +I+ KD+L ++PS+ +E RS ++ +A++ + + +
Sbjct: 246 NFIR---SKEISSEHNGTYVIIDAIKDSLKRLIMPSIEREIRSDLTEKAENHAIDVFSEN 302
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLT 494
L N + P + K + A R C P TFV + G V++
Sbjct: 303 LRNLLLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFV---AKG----VMYPHPPV 351
Query: 495 LRSQNVRDQQSKKNDQERL-LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
+KK D E++ + F+ + ++ +G S + + + M++EH
Sbjct: 352 ----------NKKEDAEKIFVDFVKTYDVELIAIGNGTASRET-----EQFVASMIQEHQ 396
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
+V + +E+ +Y S ++ ++ P + + AV++GR +Q+PL+ + +
Sbjct: 397 LNV-------QFIIVNEAGASVYSASEVARNEFPDFQVEERSAVSIGRRVQDPLSELVKI 449
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ LE G + V+ NQVG+D+N A + L
Sbjct: 450 DPKSIGVGQYQHDVNQKSLE---------GALSFVVETAVNQVGVDVNTASR-----SLL 495
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
Q++SGL P A ++ GAI K+ LG K F ++GF+R+ +
Sbjct: 496 QYVSGLTPTIAQNIIDYREENGAITHNKEIAKVKRLGAKTFEQSIGFMRIVGGKEP---- 551
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEV 755
LD+T IHPESY +A +L E+
Sbjct: 552 -----LDNTSIHPESYNVANQLLTEI 572
>gi|379015190|ref|YP_005291426.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VC40]
gi|374363887|gb|AEZ37992.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VC40]
Length = 716
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 147/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D RN+++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRNEFETPILKSDVLSI-----EDLQEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|441497162|ref|ZP_20979380.1| Transcription accessory protein [Fulvivirga imtechensis AK7]
gi|441439091|gb|ELR72417.1| Transcription accessory protein [Fulvivirga imtechensis AK7]
Length = 743
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 151/707 (21%), Positives = 286/707 (40%), Gaps = 153/707 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L I + +DLL + +PFI+ YRKE SL +
Sbjct: 11 ELGIREKQVSSVVDLLD-EGGTVPFISRYRKEMTGSL-----------------DEVAIT 52
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
+ + DLDK+ R++ L+S K+ ++L + K+
Sbjct: 53 AIRDRITQLRDLDKR------REAILKSIEKQ------------------EKLTPELEKA 88
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
+ A+T E++D+ L + +PKR T+ + + GL +A + +
Sbjct: 89 INEAQTLAELEDIYLPY-----------------KPKRKTRATVAREKGLEPLAKQI-FD 130
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEP 292
E + +Q ++AS F + + + LQGAR + A ++ +
Sbjct: 131 QENIDVQ------------------QLASQFISEEKEVANEEEALQGARDIIAEWMNEDQ 172
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAE 352
RK +R +F + V+++ + + + +W E+P+ K + L +++ E
Sbjct: 173 ETRKRMRQLFEKDGVITSRVIKGKEEEGQKYKDY--FEW--EEPIAKTPSHRLLAMRRGE 228
Query: 353 EEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
+E +L + I E S +L E G +++++ Q ++ D L PSM
Sbjct: 229 KEMILSLDICPDEASGVQLL----EKLFVKGYNQASE----QVKMAATDCYKRLLKPSME 280
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KP 471
E R +A + + L + P + + VLA PG +
Sbjct: 281 TEIRINSKTKADEEAIRVFADNLRQLLLAAPLGQMN------------VLA--LDPGFRT 326
Query: 472 ETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD-HQPHVVVLG 528
V+LD G+++ D ++ + Q K + L+K++ + + + +G
Sbjct: 327 GCKVVVLDKQGKLLHNDAIYPN----------EPQRKVAESGALIKYLCEKYNVEAIAIG 376
Query: 529 AVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPG 588
S + E R++G + L ++ +ES +Y S ++ D+ P
Sbjct: 377 NGTAS-------------RETESFVRNLGLPKNIL-VLMVNESGASVYSASDVARDEFPD 422
Query: 589 QKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDV 648
V+ AV++GR L +PLA + + + ++ +N L K+ + + V++
Sbjct: 423 HDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNAL----KHSL-DDVVMSC 477
Query: 649 TNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKK 708
N VG+++N A +E L ++SGLGP+ A S+ + G RK LG K
Sbjct: 478 VNSVGVELNTA-SKEL----LSYVSGLGPQLAKSIVQFRNENGPFKDRKSLTKVSRLGDK 532
Query: 709 VFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
F A GFLR+R + LD + +HPESY + + +A ++
Sbjct: 533 AFEQAAGFLRIRGAKNP---------LDQSAVHPESYHIVESMAADL 570
>gi|409198159|ref|ZP_11226822.1| RNA-binding protein [Marinilabilia salmonicolor JCM 21150]
Length = 707
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 152/686 (22%), Positives = 271/686 (39%), Gaps = 156/686 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL +EV + I + K+ L+KR
Sbjct: 32 IPFISRYRKERTGSL------DEV------------------AIGDIKEAYDKFQDLEKR 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+ + K EE+ L D + +E E++D+ L F
Sbjct: 68 KATIL----KTIEEQD-------------LLTDELKSKIENCYDSTELEDIYLPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+PKR T+ + + GL +A E+
Sbjct: 106 ------------KPKRKTRATKARELGLEPLAKIIMKQHER------------------- 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
E A++F ++A LQGAR + A I+ R+ VR+ F ++V++
Sbjct: 135 DIETRAASFLTDEVTDTEAALQGARDIIAEWINENQTAREIVRNSFQHHSVITARLVKGK 194
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK------LPEDSLNK 370
+ + + +W ++PL++ ++L +Q+ E+E L++ LP L +
Sbjct: 195 EEEGAKYRDY--FEW--DEPLKRCPSHRFLAMQRGEKEGFLKLGAAPDAENVLPR--LKR 248
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
LF K +DQ E+ +D+ L PS+ E +L +A +
Sbjct: 249 LFV------------KGNNDASDQVEMATEDSYKRLLAPSLENETMALFKEKADEEAIRV 296
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLF 489
+ L + P +K RVLA PG + V LD+ GE+
Sbjct: 297 FSDNLRQLLLAPPLGQK------------RVLAI--DPGYRTGCKVVCLDAQGEL----- 337
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
L ++ + +K + + K +D + A+ + + + +++ K
Sbjct: 338 -----LHNEAIYPHPPQKESVKAMKK--LDSLVDAYKIEAIAIGNGTASRETEDLVRKT- 389
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
+ RDV ++ +V D + +Y S+++ D+ P V+ AV++GR L +PLA
Sbjct: 390 -KFNRDV-----QVFVVSEDGA--SVYSASKVARDEFPQYDVTVRGAVSIGRRLMDPLAE 441
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
+ + + S + ++ + + +++V+ N VG+++N A H L
Sbjct: 442 LVKI-----DPKSIGVGQYQHDVDQHQLKDALDRVVESAVNSVGVNLNTASHH-----LL 491
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
+ISGLGP A ++ GA +R LG K F A GFLR+ S
Sbjct: 492 TYISGLGPALAKNIVSYRNENGAFASRAALKKVPRLGAKAFEQAAGFLRI---------S 542
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEV 755
+ LD T +HPESY + +++A ++
Sbjct: 543 DAKNPLDSTAVHPESYSIVKQMAADL 568
>gi|172058806|ref|YP_001815266.1| RNA-binding S1 domain-containing protein [Exiguobacterium sibiricum
255-15]
gi|171991327|gb|ACB62249.1| RNA binding S1 domain protein [Exiguobacterium sibiricum 255-15]
Length = 706
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 155/689 (22%), Positives = 268/689 (38%), Gaps = 164/689 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE+ L D+ E L HK + + KR
Sbjct: 29 IPFIARYRKEQTGEL--------------DEVEIKAILDRHKSITQLES---------KR 65
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L ++ EE++ L + +SL A T ++++D+ L F
Sbjct: 66 EDVL-----RKIEEQA-------------VLTPDLKQSLNEATTLQQIEDLYLPF----- 102
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR TK +AGL A + L PK
Sbjct: 103 ------------RPKRRTKAEIAREAGLTPFA--------------------NFLRSPKS 130
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
E+ + A +AV GA+ + A E + VR+++R A + T D
Sbjct: 131 YDEQQFHQY-VAAHGEGEAV-AGAQAIIAEEWGEQASVREHIRKTAYRFADIVTKLKKD- 187
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
A+D FA E+ +R+ + L I +AE K++ V I L E
Sbjct: 188 --AVDEKRVFAQYYEYSER-IRQIVPHRILAINRAEALKIVSVKIVLEE----------- 233
Query: 377 EHYLSDGVSKSAQLWNDQRELI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+H L + + +L +R+L+ ++ + P++ +E R+ ++ +A++ + +GK
Sbjct: 234 QHVLPNLLRPFNRLPEQKRKLVEEAVQTGYKKSVFPAIERELRNELTDKAENQAIEVFGK 293
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCL 493
L P + K + + A R C W ++D +GE+ +V G +
Sbjct: 294 NLRQLYMQPPIKGK---VMLGLDPAYRT-GCKWA---------VIDPTGEMKEV---GVV 337
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
L + Q++++ L K + + ++ +G S + E
Sbjct: 338 YLTMSEQKAQEARQV----LTKLVKRYGIELIAIGNGTAS-------------RETESFV 380
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
D E D+++ DE+ +Y S I+ + P + + A+++ R LQ+PLA + +
Sbjct: 381 ADWIKEHDQIAFTIVDEAGASIYSASEIARTEFPDLQVEQRSAISIARRLQDPLAELVKV 440
Query: 614 ----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
G G+ ++ KL +F V+ V NQVG+D+N A
Sbjct: 441 DPQSVGVGQYQHDVTQAKLKETLDF------------VVETVVNQVGVDVNTASE----- 483
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
+ L +++G+ A + GA +RK+ + LG K + A GFLR+
Sbjct: 484 SLLGYVAGITKATAKKIVERRSELGAFESRKELLKVPRLGAKAYEQAAGFLRIPEGSHP- 542
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LD T IHPE Y + L K++
Sbjct: 543 --------LDRTPIHPEQYKTVESLFKQL 563
>gi|357057561|ref|ZP_09118419.1| hypothetical protein HMPREF9334_00135 [Selenomonas infelix ATCC
43532]
gi|355374809|gb|EHG22100.1| hypothetical protein HMPREF9334_00135 [Selenomonas infelix ATCC
43532]
Length = 729
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 194/849 (22%), Positives = 327/849 (38%), Gaps = 176/849 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL D+ R ++ R
Sbjct: 34 IPFIARYRKEATGSL-------------EDEVLRQ---------------------VETR 59
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L+S K R EE RI ++ +L D + +EAAE + ++D L+ P
Sbjct: 60 LTYLRSLVK-RQEEILARIEEQGKLT------DDLRTEIEAAEKLQTLED------LYRP 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR T+ S + GL +A+ E G
Sbjct: 107 ----------YKQKKR-TRASIARERGLENLANTMLLQREAKG----------------- 138
Query: 257 TPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
+P+E A+ + A + L GAR + A I E +R+ +R F +AV+ T
Sbjct: 139 SPKEAATPYVNAEKEVPTVADALAGARDILAETIMDEAELRRLMREKFWRSAVLETTLNA 198
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
D + A F + G +P+R + L + + E++ L V I + + N + D
Sbjct: 199 DAEDA-QVFQMYDGYS----EPVRTLPSHRILAVNRGEKKGCLVVRIAVNHED-NIAWID 252
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
+ H + ++ + ++D L+P++ +E R+ ++ A+ + +G
Sbjct: 253 KRIH-------QRPSIFEGELHAAIEDGYKRLLVPALERELRTQLTEAAEEKAIAVFG-- 303
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
+ A VL PG + ++D++G +VL +G +
Sbjct: 304 ----------HNLRQLLLQPPLAGHTVLG--LDPGYRTGCKMALVDATG---NVLASGVI 348
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
Q R +++ + LLK + H ++ +G S YE + V
Sbjct: 349 ----QVTRSDGERRSAAQTLLKLIKAHGVTLISIGNGTAS--------YET-EQFVAALI 395
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
RD +++ ++ + +E+ +Y S+++ D+LP ++ AV++ R +Q+PLA + +
Sbjct: 396 RD--NDLKDVHYLITNEAGASVYSASQLAKDELPDYDVTIRGAVSIARRVQDPLAELVKI 453
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ ++ ++ + ++ + D N VG+D+N A A L
Sbjct: 454 DPQAIGVGQ---------YQHDVSQKQLKETLDATVEDAVNHVGVDLNTA-----SPALL 499
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
I+G+ A ++ G +RK LG F GFLR+ G+
Sbjct: 500 NRIAGINATIAKNIVAYRNEHGRFTSRKTLRKVARLGDAAFTQCAGFLRI-HEGETP--- 555
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL----L 785
LD T IHPESY L R I +L ED L RDR L L
Sbjct: 556 -----LDSTAIHPESYEL---------TRSILAELGVSEDDL-------RDRAKLPALAL 594
Query: 786 KTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
KT KK T+ I + + +D R P + +S LA
Sbjct: 595 KTAQTAAAPLAKKLSAGIPTVTDILKAIARPGRDPREDLPAPLTRQNIVKLSD-----LA 649
Query: 846 EGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSI 905
G +++ TVR + A + AG+L + S R D L GD L I SI
Sbjct: 650 VGTILKGTVRNITDFGAFIDIGLKQAGLLHISEMS-HRRVRHPLDALSVGDSLDVMIISI 708
Query: 906 QKNRYQVFL 914
+ R ++ L
Sbjct: 709 DEARGRIGL 717
>gi|229083532|ref|ZP_04215870.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus Rock3-44]
gi|228699786|gb|EEL52433.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus Rock3-44]
Length = 722
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 113/506 (22%), Positives = 212/506 (41%), Gaps = 72/506 (14%)
Query: 252 EDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC 311
EDPK+ +E + K S Q LQGA+ + A +S + R ++R++ ++++
Sbjct: 140 EDPKDKAKEFVNAEKEV--QSVQEALQGAQDIIAEFVSDDAAYRSWIRNVTFRKGMIASS 197
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
+ + + + G E+PL+K + L + + E+E++L+V++ P + + +
Sbjct: 198 VKDEEKDEKNIYEMYYGY----EEPLQKIVPHRVLAMNRGEKEEILKVSVVPPIEEIVRF 253
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
+ + D SKSA+ +L + D + PS+ +E R ++ A+ + +
Sbjct: 254 LH---KKVIRDDASKSAEYV----QLAIDDGYKRLVQPSIEREIRKELTETAEEQAIHIF 306
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTG 491
+ L N + P + K V+ + ++D +G+V L G
Sbjct: 307 SENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAVVDDTGKV---LHIG 350
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
+ VR + K E+++ + +Q ++ +G S + E I +++
Sbjct: 351 VIYPHP-PVRKYEDAK---EKVISIIDKYQVQMIAIGNGTASRET-----EEFIVDVLQA 401
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
PRDV + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 402 VPRDVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAELV 454
Query: 612 TL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
+ G G+ L LT V+ NQVG+++N A A
Sbjct: 455 KIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SVA 500
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
LQ++SGL A ++ G R + LG K + +GFLR+
Sbjct: 501 LLQYVSGLSKTVAKNIVSKREEDGKFTKRTELKKIPRLGAKTYEQCIGFLRILEGKNP-- 558
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAK 753
LD T IHPE Y + L K
Sbjct: 559 -------LDRTSIHPEQYKNVELLLK 577
>gi|448743176|ref|ZP_21725088.1| S1 domain RNA-binding protein [Staphylococcus aureus KT/Y21]
gi|445563529|gb|ELY19688.1| S1 domain RNA-binding protein [Staphylococcus aureus KT/Y21]
Length = 712
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 148/668 (22%), Positives = 273/668 (40%), Gaps = 105/668 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 135 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 194
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 195 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 248
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 249 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 302
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 303 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 346
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 347 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 395
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 396 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 450
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 451 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 496
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 497 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 547
Query: 735 LDDTRIHPESYGLAQELAKEV--YNRDIEGD-LNDDEDAL---EMAIEHVRDRPDLLKTY 788
LD+T IHPESY + +L ++ D+ D L D ++L E+AIE P
Sbjct: 548 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKDKLNSLDMDELAIELQVGVPT----- 602
Query: 789 LLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGR 848
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 603 -LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEGM 640
Query: 849 VVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
+ TVR V A + G++ S + + + D + GDI+ I SI KN
Sbjct: 641 KLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDKN 699
Query: 909 RYQVFLVC 916
+ +V L
Sbjct: 700 KDKVSLTM 707
>gi|421894062|ref|ZP_16324553.1| S1 RNA binding domain protein [Pediococcus pentosaceus IE-3]
gi|385272890|emb|CCG89925.1| S1 RNA binding domain protein [Pediococcus pentosaceus IE-3]
Length = 722
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 148/685 (21%), Positives = 274/685 (40%), Gaps = 153/685 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +++ E+ + +T TL+
Sbjct: 34 VPFIARYRKERTQSL-DEVQIREIQAT----YHQTETLE--------------------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KR + + I D+ Q+L +++ + A+ + V+D L+ P
Sbjct: 68 ---------KRKADVLKNIEDQ------QKLTPELAQKIRTADALQTVED------LYLP 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS-KFGYSSEQLGLQLSLEKMGDELEDPK 255
YK+ KR TK + +AGL +A+ G+ L QL
Sbjct: 107 ----------YKQ-KRRTKATIAKEAGLEPIATWILGFPQGTLAKQLQ----------SA 145
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
PE+ NS VL G + A S + +R++VRS N ++ P
Sbjct: 146 INPEQN--------LNSVDDVLAGVHEILAEAFSDQADIREWVRSYTKKNGRLTAEVKPK 197
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
G AID + G+ + + L + Q L I + E+EK+L+ I++ + +
Sbjct: 198 G-QAIDENGVY-GIYYDFSEKLNQVASHQILAINRGEKEKVLRAKIEVDPQGIERYL--- 252
Query: 376 KEHY--LSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
H+ + ++ + D + DA F+ P++ +E R+ ++ + +G+
Sbjct: 253 --HFRLIGKKTGEAVGIVEDAYQ----DAYKRFIGPAIERELRAELTAMGDQQAIKVFGE 306
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L++ + P + K + + P + ++D +G+ +D L
Sbjct: 307 NLYHLLMQAPLKGK--------------VVLGFDPAYRTGCKLAVIDENGKFLDKLVIYP 352
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
S R + K+ L F+ +Q ++ +G S S E + +++E
Sbjct: 353 HKPASMEKRAKAGKQ-----LKDFIEKYQVEMIAIGNGTASRES-----EEFVANLIKEI 402
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
R + + V +E+ +Y S + + P + + A+++GR LQ+PLA +
Sbjct: 403 KRPIYY-------VIVNEAGASVYSASNEAREAFPDLQVEERSAISIGRRLQDPLAELIK 455
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ ++ + + + ++ V+ NQVG+++N A +P
Sbjct: 456 IDPQAVGVGQ---------YQHDVAQKDLHEQLDNVVETAVNQVGVNLNTA-------SP 499
Query: 669 --LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
L ISGL A ++ G+ +RK LG K + A+GFLR+
Sbjct: 500 ELLTHISGLTKTTAKNIVNFREENGSYHSRKQLKKVPRLGPKAYEQAIGFLRIVDGD--- 556
Query: 727 SSSQFIDLLDDTRIHPESYGLAQEL 751
D+LD+T IHPESY + ++L
Sbjct: 557 ------DILDNTGIHPESYAVVKQL 575
>gi|167038148|ref|YP_001665726.1| RNA-binding S1 domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116557|ref|YP_004186716.1| Tex-like protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166856982|gb|ABY95390.1| RNA binding S1 domain protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319929648|gb|ADV80333.1| Tex-like protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 712
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 175/850 (20%), Positives = 351/850 (41%), Gaps = 184/850 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N ++ L + +L++K
Sbjct: 32 IPFIARYRKEATGSLSDEVLRN-----------------FYDRLTYLRNLEEK------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++++ R+ DE +L + I +E A T +EV+D+ F
Sbjct: 68 ------------KQDTIRLIDE-----QGKLTEEIKAKIENATTLQEVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A K S+E + GD
Sbjct: 106 ------------RPKRRTRATIAKEKGLEPLA-KVISSNEVID--------GD------- 137
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+E A + + + QGA + A +IS + +RKY+RS +N ++ T
Sbjct: 138 -VKEYAKPYLNENVPTVEEAYQGAMDIIAEDISDDADIRKYIRSFTWNNGIIVTQALKQE 196
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDC 375
S + ++ + ++ ++ + L I +AE EK + V I++ E +N+L
Sbjct: 197 RSPYEMYYDY-------KEAVKTIPPHRILAINRAEREKYISVKIEIDSERIINRL---- 245
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ V+K A ++ + + ++D+ + PS+ +E R+ ++ +A+ ++ + + L
Sbjct: 246 ----IESKVNK-ASIFAEYYKKAIEDSYKRLIAPSIEREIRNTLTEKAEEKAIIVFKENL 300
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ + P + + + P + ++D +G+++D T
Sbjct: 301 KSLLLQPPIKGH--------------VVMGFDPAYRTGCKIAVVDETGKLLD-------T 339
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
Q +N ++ L + + + ++ LG S + +++ I ++++E R
Sbjct: 340 ATVYPTPPQNDFENSKKVLKELIEKYNVTLIALGN---GTASRESEMF--IAELIKELSR 394
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
+V + V +E+ +Y S+I +++ P +++ A++L R LQ+PLA + +
Sbjct: 395 EVKY-------VIVNEAGASVYSASQIGTEEFPDINVSLRGAISLARRLQDPLAELVKID 447
Query: 614 ---CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G+ ++ KL D G++E D N VG+D+N A +
Sbjct: 448 PKSIGVGQYQHDVDQKKLG--------DALNGVVE----DCVNSVGVDLNTA-----SVS 490
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L+++SG+ A ++ + G R+ LG F GFLR+
Sbjct: 491 LLKYVSGINAAIAKNIVEYRNQIGKFTNREQLKNVKRLGDTTFTQCAGFLRILDGD---- 546
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
++ D T +HPE Y ++L ++ Y ++ ++ + ++D + L+
Sbjct: 547 -----NIFDSTAVHPERYETLEKLLRKFRYEKE------------KLDRKKLKDFANSLE 589
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
Y L++ +E + TLY I EL +D R +P + I + L
Sbjct: 590 EYGLEKISEE--YDIGLPTLYDIVSELKKPGRDPREDLPKPILRSDVMTI-----NELKP 642
Query: 847 GRVVQATVRRVQGQRAICVLESGLA--GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
G + TVR V C ++ G+ G++ + S ++ L D + GDI+ ++ S
Sbjct: 643 GMELMGTVRNVTDFG--CFVDIGVHTDGLVHISEMSQNYIKHPL-DVVSVGDIVKVRVLS 699
Query: 905 IQKNRYQVFL 914
+ R ++ L
Sbjct: 700 VDIERNRISL 709
>gi|417795533|ref|ZP_12442753.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21305]
gi|418315897|ref|ZP_12927349.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21340]
gi|334270893|gb|EGL89289.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21305]
gi|365242485|gb|EHM83192.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21340]
Length = 716
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 148/668 (22%), Positives = 273/668 (40%), Gaps = 105/668 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQELAKEV--YNRDIEGD-LNDDEDAL---EMAIEHVRDRPDLLKTY 788
LD+T IHPESY + +L ++ D+ D L D ++L E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKDKLNSLDMDELAIELQVGVPT----- 606
Query: 789 LLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGR 848
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 -LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEGM 644
Query: 849 VVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
+ TVR V A + G++ S + + + D + GDI+ I SI KN
Sbjct: 645 KLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDKN 703
Query: 909 RYQVFLVC 916
+ +V L
Sbjct: 704 KDKVSLTM 711
>gi|424845029|ref|ZP_18269640.1| transcriptional accessory protein [Jonquetella anthropi DSM 22815]
gi|363986467|gb|EHM13297.1| transcriptional accessory protein [Jonquetella anthropi DSM 22815]
Length = 722
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 162/715 (22%), Positives = 270/715 (37%), Gaps = 159/715 (22%)
Query: 49 SPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDF 108
+P+ +L ++ + LL + +PFIA YRKE+ +L +EV
Sbjct: 5 TPQIARELQLAPQAVEAVAQLLD-EGATVPFIARYRKEKTGNL------DEV-------- 49
Query: 109 ERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF 168
+ AI D K L RK A+ +R L
Sbjct: 50 ----------AITAIRDGLAKAAELASRKDAILKSLAER-----------------NLLT 82
Query: 169 DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVA 228
D + ++E A T ++D L + RPKR T+ ++ +AGL +A
Sbjct: 83 DELKAAVEGASTMTALEDTYLPY-----------------RPKRRTRATAAREAGLEPLA 125
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEI 288
E +DP+ S K +A L GAR + A I
Sbjct: 126 RLLFAQGE---------------DDPQAAAAAFVSEEKG--VADVEAALSGARDIIAEWI 168
Query: 289 SCEPCVRKYVRSIFM------DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
S + R+ +R +F+ V + P+ + D F W LR
Sbjct: 169 SEDVKARQEMRGVFVRFGRCESTVVEAKKDEPEAATYQDYFD------W--SDSLRSVPS 220
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDA 402
+ L + E E L V I+ P D + L + ++ + S Q+ ++D+
Sbjct: 221 HRLLAALRGEREGYLSVRIR-PSDQVALL--TLRRLFIKGEGAASGQVTA-----AIEDS 272
Query: 403 LDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVL 462
L PSM EAR+++ RA + + + + L + P+ A VL
Sbjct: 273 YKRLLGPSMENEARAMLKKRADTEAIAIFARNLRQLLMASPF------------GARAVL 320
Query: 463 ACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
A PG + V LD++G ++ DV+F Q DQ K R + +
Sbjct: 321 AV--DPGVRTGCKVVALDATGALLAHDVIFI-------QRGADQLEKAAAIIR--QLISK 369
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
H P V +G N + + D G +D + ++ ES +Y S
Sbjct: 370 HSPLAVAVG--NGTASRETVDFLN-------------GLSLD-IPVLVVSESGASVYSAS 413
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
+ +LP Q V+ AV++GR L +PLA + + + + ++ + +
Sbjct: 414 EEARKELPDQDVTVRGAVSIGRRLMDPLAELVKIDPKAIGVGQY-----QHDVDQKQLRE 468
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
++ ++ N VG+D+N A R L ++SGL + A + G +R
Sbjct: 469 SLDDTVISCVNSVGVDLNTASPRL-----LSYVSGLSDKLARGIVAHREANGPFTSRSAL 523
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+ LG K + A GFLRVR S I+ LD + +HPE+Y L ++A +
Sbjct: 524 LDVPRLGPKTYQQAAGFLRVRNS---------INPLDASAVHPENYKLVGQMASD 569
>gi|332654043|ref|ZP_08419787.1| S1 RNA binding domain protein [Ruminococcaceae bacterium D16]
gi|332517129|gb|EGJ46734.1| S1 RNA binding domain protein [Ruminococcaceae bacterium D16]
Length = 720
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 139/608 (22%), Positives = 247/608 (40%), Gaps = 110/608 (18%)
Query: 151 ESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRP 210
E R+ +T + +L D +S +++AA+T E +D L+ P YK+
Sbjct: 65 EQRKGEIKTSIENQGKLTDELSAAIDAAKTLAEAED------LYRP----------YKQ- 107
Query: 211 KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF--KCA 268
KR T+ + + GL +A S PE A++F
Sbjct: 108 KRRTRATIAREKGLAPLAQLLFAQSRDC-----------------PAPEAAAADFIDPEK 150
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT---PDGDSAIDSFHQ 325
+ + LQGA + A EIS + +RK +R +F+ VV + P+ D+ ++
Sbjct: 151 GVETVEDALQGANDIIAEEISDDAAIRKELRELFLRRGVVVSKAADKEPE-DTVYRLYYD 209
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVS 385
F + P+ + + Q L I + E E +L+V ++L ++ + + L G
Sbjct: 210 F-------KCPVSRIQGYQVLAINRGEREDVLKVAVELDGETAH---VAVRRAVLVPGAP 259
Query: 386 KSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ 445
A + DA D + PS+ +E RS ++ +A + + L + P +
Sbjct: 260 SMAFVRAAA-----DDAYDRLIEPSLEREIRSHLTDQANEGAIHMFALNLKPLLMQPPVK 314
Query: 446 RKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQ 504
K + PG + ++D +G+V+D + V
Sbjct: 315 GK--------------VTMGLDPGYRMGCKVAVVDGTGKVLD----------TAVVYPTY 350
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
++ QE + K + H V A+ S + + KM E + +G + +
Sbjct: 351 GERQKQEAIQKLSALVKKHHVEHIAIGNGTASRETE------KMTVELIQKLGGGVSYMI 404
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
+ E+ +Y S++++++ P N++ AV++ R LQ+PLA + + + ++
Sbjct: 405 V---SEAGASVYSASKLAAEEFPQFDVNLRSAVSIARRLQDPLAELVKIDPKAIGVGQYQ 461
Query: 625 LCPLENFLTPDEKYG-MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
P + G ++ V+ D N VG+D N A + LQ +SGL A ++
Sbjct: 462 ------HDMPQAQLGEALDGVVEDCVNAVGVDANTA-----SPSLLQRVSGLTATTAKNV 510
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
+ GA TRK + LG K F GFLRV S +LD T +HPE
Sbjct: 511 VKYREENGAFTTRKQLLKVPKLGPKAFEQCAGFLRVPESK---------SVLDHTGVHPE 561
Query: 744 SYGLAQEL 751
SY A++L
Sbjct: 562 SYAAAEKL 569
>gi|443329281|ref|ZP_21057868.1| transcriptional accessory protein [Xenococcus sp. PCC 7305]
gi|442791023|gb|ELS00523.1| transcriptional accessory protein [Xenococcus sp. PCC 7305]
Length = 719
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 164/721 (22%), Positives = 280/721 (38%), Gaps = 175/721 (24%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+ SI++ +I L+L + IPFIA YRKE SL +LE + FER
Sbjct: 11 AQEFSIAQQNINNALELWT-EGATIPFIARYRKERTGSL-DELELRNI-------FERYT 61
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLA--LNQQLFDS 170
L L+KRK + +I + +L L Q+
Sbjct: 62 YLTE----------------LEKRKETILE-----------KISSQNKLTAELKNQIISC 94
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
++K+ +++D+ L + +PKR T+ S + GL +A
Sbjct: 95 LNKT--------DLEDIYLPY-----------------KPKRRTRASIAREQGLEPLAKF 129
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+ +SLE++ E + + E N++ A L GA + A ++
Sbjct: 130 IQSLNHPQAKTVSLEEVAQEYINESQGIE-----------NANDA-LSGAADILAEAVAD 177
Query: 291 EPCVRKYVRS-IFMDNAVVSTCPT--PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL 347
+ +R Y+R+ +F VS P+G + + + ++ + + K L
Sbjct: 178 KAEIRAYLRAYLFKKGVFVSQIKKDFPEGSTKYEMYRKY-------QYAVSKIPPHNILA 230
Query: 348 IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
+ + E EK+L V IK+ E+ + + ++KS + N R + LKDA + L
Sbjct: 231 LYRGEAEKILTVDIKIAEEEVMAYLEG------QEILTKSTIIKNFYRAM-LKDAFNRLL 283
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
PS+V+E RS A + + L N + P K P P C
Sbjct: 284 KPSLVREVRSDRKQYADLESIKTFETNLRNLLLSSPAGMK-----PTLAIDPGFRTGCKV 338
Query: 468 PGKPET-TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVV 526
ET F+ + +F S + +Q+K+ Q+ + K+ ++
Sbjct: 339 AALSETGRFIKYQA-------IFP-----HSGTQKREQAKRIVQDFISKYNIE------- 379
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI----VYGDESLPRLYENSRIS 582
L A+ S + D + +G + EL + V +ES +Y S ++
Sbjct: 380 LIAIGNGTASRETDQF-------------IGESIKELDLKPIKVIVNESGASIYSASDVA 426
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR-------EILSWKLCPLENF 631
+ P V+ A+++GR LQ+PLA + + G G+ ++L KL
Sbjct: 427 RQEFPDLDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVEQKLLKKKLA----- 481
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
+ + N VG+D+N A L F+SG+ A ++ G
Sbjct: 482 -----------ETVESCVNYVGVDLNTA-----STELLTFVSGISGAIANNIVAYRNEKG 525
Query: 692 AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
A RK+ + LG K F A GFLR+R LD+T +HPESY L +++
Sbjct: 526 AFKNRKELLKVAKLGAKTFEQAAGFLRIRNGDNP---------LDNTGVHPESYQLIKQM 576
Query: 752 A 752
A
Sbjct: 577 A 577
>gi|116493258|ref|YP_804993.1| transcriptional accessory protein [Pediococcus pentosaceus ATCC
25745]
gi|116103408|gb|ABJ68551.1| Transcriptional accessory protein [Pediococcus pentosaceus ATCC
25745]
Length = 722
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 148/687 (21%), Positives = 275/687 (40%), Gaps = 153/687 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +++ E+ + +T TL+
Sbjct: 34 VPFIARYRKERTQSL-DEVQIREIQAT----YHQTETLE--------------------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KR + + I D+ Q+L +++ + A+ + V+D L+ P
Sbjct: 68 ---------KRKADVLKNIEDQ------QKLTPELAQKIRTADALQTVED------LYLP 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS-KFGYSSEQLGLQLSLEKMGDELEDPK 255
YK+ KR TK + +AGL +A+ G+ L QL
Sbjct: 107 ----------YKQ-KRRTKATIAKEAGLEPIATWILGFPQGTLAKQLQ----------SA 145
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
PE+ NS VL G + A S + +R++VRS N ++ P
Sbjct: 146 INPEQD--------LNSVDDVLAGVHEILAEAFSDQADIREWVRSYTKKNGRLTAEIKPK 197
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
G AID + G+ + + L + Q L I + E+EK+L+ I++ + +
Sbjct: 198 G-QAIDENGVY-GIYYDFSEKLNQVASHQILAINRGEKEKVLRAKIEVDPQGIERYL--- 252
Query: 376 KEHY--LSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
H+ + ++ + D + DA F+ P++ +E R+ ++ + +G+
Sbjct: 253 --HFRLIGKKTGEAVGIVEDAYQ----DAYKRFIGPAIERELRAELTAMGDQQAIKVFGE 306
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L++ + P + K + + P + ++D +G+ +D L
Sbjct: 307 NLYHLLMQAPLKGK--------------VVLGFDPAYRTGCKLAVIDENGKFLDKLVIYP 352
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
S R + K+ L F+ +Q ++ +G S S E + +++E
Sbjct: 353 HKPASMEKRAKAGKQ-----LKDFIEKYQVEMIAIGNGTASRES-----EEFVANLIKEI 402
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
R + + V +E+ +Y S + + P + + A+++GR LQ+PLA +
Sbjct: 403 KRPIYY-------VIVNEAGASVYSASNEAREAFPDLQVEERSAISIGRRLQDPLAELIK 455
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ ++ + + + ++ V+ NQVG+++N A +P
Sbjct: 456 IDPQAVGVGQ---------YQHDVAQKDLHEQLDNVVETAVNQVGVNLNTA-------SP 499
Query: 669 --LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
L ISGL A ++ G+ +RK LG K + A+GFLR+
Sbjct: 500 ELLTHISGLTKTTAKNIVNFREENGSYHSRKQLKKVPRLGPKAYEQAIGFLRIVDGD--- 556
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAK 753
D+LD+T IHPESY + ++L +
Sbjct: 557 ------DILDNTGIHPESYAVVKQLVQ 577
>gi|149918403|ref|ZP_01906893.1| hypothetical protein PPSIR1_35722 [Plesiocystis pacifica SIR-1]
gi|149820703|gb|EDM80113.1| hypothetical protein PPSIR1_35722 [Plesiocystis pacifica SIR-1]
Length = 793
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 162/760 (21%), Positives = 296/760 (38%), Gaps = 130/760 (17%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L ++ L AA T++ V+D L+ P YK KR T+ + + GL
Sbjct: 91 KLTPALEAQLRAATTKQRVED------LYLP----------YK-TKRRTRATIARERGLG 133
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A + +L + G+ DP+ + + K + AVL G R +
Sbjct: 134 PLAER------------ALAQPGEG--DPQTEAQALVDPAK--ELADTHAVLTGVREILV 177
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLR-EKPLRKFEDAQ 344
++ +P VR VR F D+ V+ T ++ S + W +P K +
Sbjct: 178 ETVAEQPEVRASVRKHFGDHGVLETTEVAGREAGERSKFE----DWFDWSEPASKIPSHR 233
Query: 345 WLLIQKAEEEKLLQVTI----KLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILK 400
+L I++ E+E +L+ I L + + L +D + K+ +
Sbjct: 234 YLAIRRGEKEGVLRSKIVVEPALVQPQVETLMQLDPASPFADVLRKA-----------ID 282
Query: 401 DALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPR 460
AL L + + R + RA + + + L N + P
Sbjct: 283 KALRGRLSIGVETDVRVELKQRADREAVEVFAENLRNLLLAAPLGA-------------- 328
Query: 461 VLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
V PG + LD++G+ F +T+ RD+ + + L F+
Sbjct: 329 VSVIGIDPGLRTGCKCAALDATGK-----FLETITIYPVRDRDRAAAQ-----LQAFVAK 378
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
H P V +G + T ++ + E R +G E + +V +E+ +Y S
Sbjct: 379 HGPRAVAVG----NGTGGRE-----TEALTREVVRKLGGEQAPI-VVSVNEAGASVYSAS 428
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
++ ++ P ++ A+++ R LQ+PLA + + + ++ + L
Sbjct: 429 EVAREEFPDLDLTIRGAISIARRLQDPLAELVKIDPKSIGVGQYQHDVQQTLLKRK---- 484
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
+ +V+ N+VG+++N A + L +++G+G A + R G R
Sbjct: 485 -LHEVVESCVNKVGVELNTA-----SASLLSYVAGVGGSLAKKIVAHRERVGPFPNRAAL 538
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRD 759
GLG K F A GFLRVR S LD + +HPE Y L + +A +
Sbjct: 539 SEVPGLGPKTFEQAAGFLRVRDSATP---------LDRSAVHPERYALVERMAAD----- 584
Query: 760 IEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQD 819
L +++ + P+L K L R++ +++ TL I EL D
Sbjct: 585 -----------LGVSVLEIVGNPELAKRVDLQRYV-DREAGVGELTLRDILSELAKPGLD 632
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDY 879
R +++ P ++ + +S L EG ++ V V A + G++ +
Sbjct: 633 PRAEFEAPQFRDDVHEMS-----DLEEGMALEGVVTNVTKFGAFVDVGVHQDGLVHVSEL 687
Query: 880 SDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRES 919
SD W D S + GD L ++ S+ R ++ L R+S
Sbjct: 688 SDKWVDDP-SKVVKVGDKLKVRVLSVDLERKRIALSARKS 726
>gi|339445158|ref|YP_004711162.1| hypothetical protein EGYY_16210 [Eggerthella sp. YY7918]
gi|338904910|dbj|BAK44761.1| hypothetical protein EGYY_16210 [Eggerthella sp. YY7918]
Length = 720
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 159/685 (23%), Positives = 281/685 (41%), Gaps = 151/685 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE + DD A+ +LD++ L+
Sbjct: 32 IPFIARYRKEATGGM--------------DDV-------------ALRELDERLTYLR-- 62
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLH 194
AL E+R+ E A+++Q L + + +EAA + V+D L+
Sbjct: 63 --AL----------EARKA--EVLHAIDEQGKLTADLREKIEAATVMQRVED------LY 102
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
P YK+ KR+T+ S +AGL +A + G L+L E
Sbjct: 103 KP----------YKK-KRATRASKAREAGLEPLAVLVMAQATTQGDPLALASSYVNAEAG 151
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
TPE A LQGA+ + A I+ + +R++ ++ +
Sbjct: 152 YATPE---------------AALQGAQDIVAETIADDAEHVAALRTLTRRQGALAVEASD 196
Query: 315 DGDSAI-DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+ + +S++ FA +PL + + + L I + E+E L+V ++ D+
Sbjct: 197 ANEKTVYESYYDFA-------EPLSRIPNHRILAINRGEKEGKLKVRVRTDTDA------ 243
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
E V +S ++ + D+ + PS+ +E R+ ++ RA++ + + K
Sbjct: 244 -AIEQLERRVVRRSNSVFAGALREAIADSYKRLIAPSLERELRAELTERAQTDAIRVFAK 302
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
+ +S P + RV+A PG + +LD G+++D G
Sbjct: 303 NTESLLSQRPVR------------GARVIA--LDPGYRTGCKVAVLDEYGKLLD---HGT 345
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ +Q+K L + H+ +V+V+G S + E++ + E
Sbjct: 346 VYPTPPRREIEQTKHT----LADLVRRHRANVIVIGNGTGS-----RETEEVVADFIAET 396
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
D G + + +IV +E+ +Y S+++S++ P + A++LGR LQ+PLA +
Sbjct: 397 --DAGANL-QYTIV--NEAGASVYSASKLASEEYPDLDVTTRGAMSLGRRLQDPLAELVK 451
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ L LT G++E + N+VG+D+N A +
Sbjct: 452 IPPQSIGVGQYQHDLNQATLGRALT-----GVVE----NAVNRVGVDLNTA-----SPSL 497
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L ++SG+ A ++ GA R++ LG K F N GFLR+
Sbjct: 498 LGYVSGVSVAVAKNIVAYREEHGAFTDRRELKKVPKLGAKAFQNCAGFLRIEGG------ 551
Query: 729 SQFIDLLDDTRIHPESYGLAQELAK 753
+ LD T +HPESY +A+EL K
Sbjct: 552 ---TNPLDATSVHPESYPVARELLK 573
>gi|313893100|ref|ZP_07826677.1| Tex-like protein N-terminal domain protein [Veillonella sp. oral
taxon 158 str. F0412]
gi|313442453|gb|EFR60868.1| Tex-like protein N-terminal domain protein [Veillonella sp. oral
taxon 158 str. F0412]
Length = 759
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 159/769 (20%), Positives = 303/769 (39%), Gaps = 120/769 (15%)
Query: 151 ESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRP 210
E+RR + +++ D + KSLEAA +E++D+ L + RP
Sbjct: 66 ETRRQEIIASITEQEKMTDELMKSLEAATKLQELEDLYLPY-----------------RP 108
Query: 211 KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMF 270
K+ T+ + GL +A + G P E+A +F
Sbjct: 109 KKRTRAMIARERGLEPLAEMILNDTVTAG-----------------DPLEIAKDFVTEEV 151
Query: 271 NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVK 330
+ + +QGA + A +S R Y+R + + T D + F Q+A
Sbjct: 152 PTPEDAIQGASDIVAEIVSDSADFRAYLRKKMWNEGFIQAELTGD-EEVQQQFLQYAEYA 210
Query: 331 WLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ- 389
+P+R+ + L + + E+ L++ + +P D+ Y+ + K+ +
Sbjct: 211 ----EPVRQMPSHRILAVNRGEKLGALKLALTVPGDTYVA--------YMVQKLEKNPKS 258
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN 449
++ D + + DA + P++ ++ R+ ++ A + +G L N + P
Sbjct: 259 IFADYKAAAVADAYKRLIFPALERDIRNELTENADEQAIKVFGVNLKNLLLQPPLAGH-- 316
Query: 450 DITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
+ PG + ++D G V+D G L + ++++K
Sbjct: 317 ------------IIMGLDPGYRTGCKMAIIDQQGNVLDY---GAYYLTNSEKLRKEAQKV 361
Query: 509 DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG 568
+++ KF V L ++ S + + + M+EE D + +
Sbjct: 362 LADKIRKFK-------VTLLSIGNGTASYETE--QFASTMIEEEKLDCHY-------IIT 405
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPL 628
+E+ +Y S+++ D+LP ++ AV++ R +Q+PLA + + S +
Sbjct: 406 NEAGASVYSASKLAIDELPDLDVTIRGAVSIARRVQDPLAESVKI-----DPKSIGVGQY 460
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
++ + + ++QV+ V N VG+++N A A LQ I+G+ A ++
Sbjct: 461 QHDVNQKQLTHTLDQVVETVVNHVGVELNTA-----SPAILQHIAGISSTVAKNIVAYRQ 515
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
G +RK+ + LG F GFLR++ LD+T +HPESY LA
Sbjct: 516 ENGVFKSRKELLKVPRLGPAAFTQCAGFLRLQHGKNP---------LDNTSVHPESYELA 566
Query: 749 QELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYL 808
+ + E + L D +D ++ V K L+D K + T+
Sbjct: 567 ERIIGE-----LGFTLKDLQDKAQLEALQV-------KLPLVDAGKMAAKLDAGVPTVRD 614
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLES 868
I L +D R P + +++S E + G VV+ TV V A
Sbjct: 615 ILGALAKPGRDPREDLPAPLTRK--HVVSLE---DIQVGTVVKGTVHNVVDFGAFVDFGL 669
Query: 869 GLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
G+L + + + + SD L GDI+ +I S+ R ++ L +
Sbjct: 670 KTNGLLHRSELCNSRQHP--SDVLAVGDIIEAQIISVDVKRNRIGLSVK 716
>gi|224477053|ref|YP_002634659.1| hypothetical protein Sca_1569 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421660|emb|CAL28474.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 716
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 111/505 (21%), Positives = 214/505 (42%), Gaps = 75/505 (14%)
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
E PE A F + Q L GA+ + A IS P R + + + +++T
Sbjct: 136 EKPEVYAEQFINDEITTVQESLSGAQDIIAEWISDNPKYRNKILNDTLKRGLITTQKKKK 195
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF--S 373
+ +F + + +P+ K + + L + + E+EK+L + +++ + + +
Sbjct: 196 AEDEKQTFEMY----YDFSEPVNKIANHRILAMNRGEKEKVLSIKVEMDTEKIEQDIERQ 251
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ K ++ K A +KD+L ++PS+ +E RS ++ +A++ + +
Sbjct: 252 EVKNNHEGARYIKEA----------IKDSLKRLIMPSIEREIRSDLTEKAETHAIEVFSV 301
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCL 493
L + + P + K + A R C P +FV + G V++
Sbjct: 302 NLKHLLLQPPLKGKQ---ILGVDPAFRT-GCKLAVINPFGSFV---AKG----VMYPHPP 350
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
++ K + LL+F+ D+ ++ +G S + + I ++++H
Sbjct: 351 VSKT---------KEAENTLLQFINDYNVSLIAIGNGTASRET-----EQFIADLIQKHH 396
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
DV + +E+ +Y S ++ + P + + AV++GR +Q+PL+ + +
Sbjct: 397 LDV-------QFIIVNEAGASVYSASDVARAEFPDFQVEERSAVSIGRRVQDPLSELVKI 449
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ LE+ L + V+ NQVG+D+N A + L
Sbjct: 450 DPKSIGVGQYQHDVNQKSLESAL---------DFVVETAVNQVGVDVNTASQ-----SLL 495
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
Q ++GL P+ A ++ GA+ K LG K F ++GFLR+ +
Sbjct: 496 QHVAGLSPQIAQNIIAYREENGALTHHKQISKVKRLGPKTFEQSIGFLRIVNGKEP---- 551
Query: 730 QFIDLLDDTRIHPESYGLAQELAKE 754
LD+T IHPESY +A +L KE
Sbjct: 552 -----LDNTAIHPESYEVAYQLLKE 571
>gi|253731100|ref|ZP_04865265.1| S1 domain RNA-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|417900285|ref|ZP_12544175.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21266]
gi|253725175|gb|EES93904.1| S1 domain RNA-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|341848965|gb|EGS90120.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21266]
Length = 716
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 148/668 (22%), Positives = 273/668 (40%), Gaps = 105/668 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQELAKEV--YNRDIEGD-LNDDEDAL---EMAIEHVRDRPDLLKTY 788
LD+T IHPESY + +L ++ D+ D L D ++L E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKDKLNSLDMDELAIELQVGVPT----- 606
Query: 789 LLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGR 848
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 -LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEGM 644
Query: 849 VVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
+ TVR V A + G++ S + + + D + GDI+ I SI KN
Sbjct: 645 KLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDKN 703
Query: 909 RYQVFLVC 916
+ +V L
Sbjct: 704 KDKVSLTM 711
>gi|418947187|ref|ZP_13499571.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
IS-157]
gi|375376687|gb|EHS80210.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
IS-157]
Length = 588
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 11 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 70
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 71 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 124
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 125 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 178
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 179 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 222
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 223 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 271
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 272 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 326
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 327 GVGQYQHDVNQKALENALT---------FVVETAVNQVGVDVNTA-----SSSLLQYVSG 372
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 373 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 423
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 424 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVP----- 477
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 478 -TLEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEG 515
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 516 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 574
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 575 NKDKVSLTM 583
>gi|422344033|ref|ZP_16424960.1| hypothetical protein HMPREF9432_01020 [Selenomonas noxia F0398]
gi|355377781|gb|EHG24990.1| hypothetical protein HMPREF9432_01020 [Selenomonas noxia F0398]
Length = 729
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 185/845 (21%), Positives = 331/845 (39%), Gaps = 168/845 (19%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL +D+ R + R
Sbjct: 34 IPFIARYRKEATGSL-------------DDEILRR---------------------IAAR 59
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L+S K R EE RI ++ ++ D++ +++E A+ + ++D L+ P
Sbjct: 60 LTYLRSLVK-RQEEIIARIEEQGKMT------DALREAIETAQKLQSLED------LYRP 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ K+ T+ S GL ++A SE G
Sbjct: 107 ----------YKQ-KKHTRASIARARGLEQLADAILLQSEMHG----------------- 138
Query: 257 TPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
TPE+ A+ F A S L GAR + A ++ + +R +R F NA++ T
Sbjct: 139 TPEQYAAPFVSAEKEVPSPADALAGARDIIAETVTDDAELRHLMREKFWKNALLETALDV 198
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
+ A F + G +P+R + L I + E + L V I + ++ +
Sbjct: 199 KAEDA-HVFQMYDGYS----EPVRTLPSHRILAINRGERKGCLTVRISVDHEAYIE---- 249
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
++ + + +++ + ++D L+PS+ +E R+ ++ A+ + +G+
Sbjct: 250 ----WICGRICRHPSIFSAELRTAIEDGYKRLLVPSLERELRAQLTELAEEKAIKLFGR- 304
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
+ A VL PG + ++D++G +VL +G +
Sbjct: 305 -----------NLRQLLLQPPLAGHTVLG--LDPGYRTGCKMAVVDATG---NVLASGVI 348
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
Q + + +K + KF+ H ++ +G S YE + V
Sbjct: 349 ----QITKSEGERKAAALSVQKFIKTHGVTLISIGNGTAS--------YE-TEQFVAALI 395
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
RD +++ ++ + +E+ +Y S+++ ++LP ++ AV++ R +Q+PLA + +
Sbjct: 396 RD--NKLKDVHYLITNEAGASVYSASQLAKEELPSYDVTIRGAVSIARRVQDPLAELVKI 453
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ ++ ++ E ++ + D N VG+D+N A A L
Sbjct: 454 DPQAIGVGQ---------YQHDVSQKELKERLDAAVEDAVNHVGVDLNTA-----SPALL 499
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
+ I+G+ A ++ + G RK LG F GFLR+ G+
Sbjct: 500 RRIAGINAAVAKNIVAYRNKNGRFTNRKALHKVSRLGDAAFTQCAGFLRI-YGGETP--- 555
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYL 789
LD T +HPESY LA+ + E+ E DL D +A++ R P L
Sbjct: 556 -----LDGTAVHPESYELARAILAELGT--AEDDLRDRAKLPALALKTARAEPAGLA--- 605
Query: 790 LDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRV 849
KK T+ I R + +D R + P + +S LA G +
Sbjct: 606 -------KKLGAGIPTVTDILRAIARPGRDPREELPAPLMRQNIVKLSD-----LAIGAI 653
Query: 850 VQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNR 909
+ TVR + A + AG+L + S L D L GD L I S+ + R
Sbjct: 654 LPGTVRNITDFGAFIDIGLKQAGLLHISEMSCRRVRHPL-DILSVGDALDVMIISVDEER 712
Query: 910 YQVFL 914
++ L
Sbjct: 713 ERIGL 717
>gi|257089716|ref|ZP_05584077.1| S1 RNA binding protein [Enterococcus faecalis CH188]
gi|312904062|ref|ZP_07763230.1| S1 RNA binding domain protein [Enterococcus faecalis TX0635]
gi|422688627|ref|ZP_16746775.1| S1 RNA binding domain protein [Enterococcus faecalis TX0630]
gi|256998528|gb|EEU85048.1| S1 RNA binding protein [Enterococcus faecalis CH188]
gi|310632538|gb|EFQ15821.1| S1 RNA binding domain protein [Enterococcus faecalis TX0635]
gi|315578409|gb|EFU90600.1| S1 RNA binding domain protein [Enterococcus faecalis TX0630]
Length = 730
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 178/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P E+ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLREDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|402579801|gb|EJW73752.1| hypothetical protein WUBG_15339 [Wuchereria bancrofti]
Length = 285
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 13/158 (8%)
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDL 764
+G KVF+N+ GF+++ + + + ++++LD +R+HPE+Y A+++A + D D
Sbjct: 1 MGPKVFMNSAGFIKIDTAKVSERTDAYVEVLDGSRVHPETYEWARKMAVDALEIDDAADP 60
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWR 821
A+E + PD LK LD +E R+ NK TLY IR EL H ++D R
Sbjct: 61 TS-------ALEEILQNPDKLKDLDLDAFAEELARQGFGNKSITLYDIRAELNHRYKDLR 113
Query: 822 NQYKEPSQDEEFYMISGETEDT---LAEGRVVQATVRR 856
Y+ PS + F M++ ET D+ L GRV+ R+
Sbjct: 114 VPYESPSAERIFTMLTKETSDSIGKLVMGRVMHIVYRK 151
>gi|379730853|ref|YP_005323049.1| RNA binding S1 domain-containing protein [Saprospira grandis str.
Lewin]
gi|378576464|gb|AFC25465.1| RNA binding S1 domain protein [Saprospira grandis str. Lewin]
Length = 771
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 206/485 (42%), Gaps = 74/485 (15%)
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP 336
L+GAR + A I+ + R VR + A + + + + ++P
Sbjct: 218 LEGARDIIAERINQDERARATVRQHYQKRARFKAEVVAGKEEEAQKYKNY----FELDRP 273
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPED-SLNKLFSDCKEHYLSDGVSKSAQLWNDQR 395
L++ + Q L + +AE+E LL+V + ED LN L D W +Q
Sbjct: 274 LKQLQAHQILAVLRAEKEGLLKVQLAPNEDYVLNDLCGQFIRRSCPDR-------WAEQL 326
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDE 455
++ ++DA + PS+ E +A + + L + P K
Sbjct: 327 DMAIEDAYKRLMKPSISNEFVKQAKAQADLASIQIFADNLRQLLLASPLGNK-------- 378
Query: 456 EAAPRVLACCWGPGKPE-TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLL 514
R++A PG V L ++GE+++ + R+++ + D +L
Sbjct: 379 ----RMMAI--DPGYATGCKLVCLSATGELLE-----DTVIYPTPPRNRKFQATDT--VL 425
Query: 515 KFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPR 574
+ H+ + +G + T+ ++ E+ R + E +I +ES
Sbjct: 426 DLIEKHRIEAIAIG----NGTAGRE---------TEQFIRQLPFEGTPPAIFLVNESGAS 472
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLEN 630
+Y S I+ + P + V+ AV++GR L +PLA + + G G+ L+N
Sbjct: 473 IYSASEIARQEFPDKDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQKQLQN 532
Query: 631 FLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA 690
K G + + V N VG+D+N A E+ L ++SGLGP A ++
Sbjct: 533 ------KLGAVVESCV---NAVGVDLNTA--SEYL---LTYVSGLGPALARNIVDYRRSK 578
Query: 691 GAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQE 750
GA +R++ + LG+K F A GFLR+R+ I LD+T +HPE+Y + ++
Sbjct: 579 GAFKSRQELRSVKRLGEKAFEQAAGFLRIRKG---------IHPLDNTGVHPEAYPIVEQ 629
Query: 751 LAKEV 755
+AK++
Sbjct: 630 MAKDL 634
>gi|358052639|ref|ZP_09146473.1| S1 RNA-binding domain-containing protein [Staphylococcus simiae CCM
7213]
gi|357257872|gb|EHJ08095.1| S1 RNA-binding domain-containing protein [Staphylococcus simiae CCM
7213]
Length = 716
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 208/497 (41%), Gaps = 77/497 (15%)
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR-KYVRSIFMDNAVVSTCP--TPDGDS 318
A F + ++GA+ + A +IS P R K ++ ++ ++++T D
Sbjct: 142 AQQFFNEEVTTVDEAIKGAQDIIAEQISDNPKYRTKILKDMYHQGSIITTKKKNAEDDKG 201
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
+ ++ ++ +P++K + + L + + E+EK+L V + L + K+
Sbjct: 202 IFEMYYNYS-------EPIKKIANHRVLAVNRGEKEKILTVKFDFDTTQIEALIT--KQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ D + D ++D+L ++PS+ +E +S ++ +A+ ++ + + L N
Sbjct: 253 IIQDNP------YQDYIIEAIRDSLKRLIIPSIEREIQSDLTEKAEHHAILVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TFV G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFVA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K + + D+ ++ +G N + + + I K H
Sbjct: 351 VSKIEAAEKT----FVNLVRDYDVQLIAIG--NGTASRETEQFVADIIK---------KH 395
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
E+ + + +E+ +Y S ++ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 396 EL-PVQFIIVNEAGASVYSASEVARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKELENALTF---------VVETAVNQVGVDVNTASQ-----SLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L P+ A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSPQIAKNIITYREENGAIKHNKEISKIKRLGAKTFEQSIGFLRIVEGTEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL 751
LD+T IHPESY +L
Sbjct: 552 LDNTSIHPESYQTTYQL 568
>gi|384178170|ref|YP_005563932.1| S1 RNA-binding domain-containing protein [Bacillus thuringiensis
serovar finitimus YBT-020]
gi|324324254|gb|ADY19514.1| S1 RNA-binding domain-containing protein [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 722
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 206/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAIEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSAV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D +
Sbjct: 199 KDEEKDEKNIYEMY----YSYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVDEIVTFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSAQ L ++D + PS+ +E R ++ A+ + +
Sbjct: 255 Y---KKVIRDNDSKSAQYVK----LAIEDGYKRLIQPSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVEREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|335039946|ref|ZP_08533088.1| Tex-like protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180190|gb|EGL82813.1| Tex-like protein [Caldalkalibacillus thermarum TA2.A1]
Length = 735
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 150/712 (21%), Positives = 297/712 (41%), Gaps = 158/712 (22%)
Query: 54 HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT 113
+L+I ++ + R + LL + +PF+A YRKE V N++ R
Sbjct: 22 QELNIPKEAVKRTIALLQ-EGNTVPFVARYRKE-------------VTGGLNEEQIRA-- 65
Query: 114 LKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK 173
+++R LQ+ ++++ EE R I ++ +L + + +
Sbjct: 66 -------------------IEERYRYLQNLWQRK-EEVLRLIAEQGKLT------EELKE 99
Query: 174 SLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGY 233
+ AE +EV+D F RPKR T+ + + GL +A +
Sbjct: 100 KIVRAEKLQEVEDYYRPF-----------------RPKRRTRATVAKEKGLEPLAERLVN 142
Query: 234 SSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPC 293
S LE P++ E S ++ + VLQGA + A I+ E
Sbjct: 143 CS---------------LESPEKEAERYLSTEH--ELHTVEDVLQGAMDIIAEWIADEAE 185
Query: 294 VRKYVRS-IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAE 352
VR+++R F + +V+ + D Q + + + P+ + + L I +AE
Sbjct: 186 VRQWIRDYTFANGRLVTELKNQEHDP-----KQVYRMYYEYQSPIPQLVSHRVLAINRAE 240
Query: 353 EEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
+E++++V +++ +++ + ++ ++ + S +A + DQ + D+ + P++
Sbjct: 241 KEEVIKVKLEIETETIKRYL---QKRWVKNERSPAAS-YIDQA---IVDSYKRLIAPAIE 293
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE 472
+E R ++ +A+ + + K L + + P R + D P C
Sbjct: 294 REIRRELTEQAEEQAIDIFAKNL-RALLLQPPVRGKTVLGID----PAYRTGC------- 341
Query: 473 TTFVMLDSSGEV--VDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAV 530
++D +G+V +DV++ V + + +LL + HQ +V +G
Sbjct: 342 -KLAVVDPTGKVLAIDVIYP---------VPPHNKIEEAKRKLLALVDKHQVDIVAIGNG 391
Query: 531 NLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQK 590
S + + + ++++E EL+ + +E+ +Y S ++ ++ P
Sbjct: 392 TAS-----RETEQFVAQVIQETEH-------ELAYIMINEAGASVYSASPLAKEEFPDLD 439
Query: 591 GNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQ 643
+ A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 440 VAERSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTKLSESLSF------------ 487
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAH 703
V+ V NQVG+D+N A + LQ++SGL A + + + G + +R+ +
Sbjct: 488 VVETVVNQVGVDVNTA-----SVSLLQYVSGLNKSVAKEIVKYREQHGRLTSRRQLLDVP 542
Query: 704 GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LG K + AVGF+R+ G+ D D T IHPESY A+ E+
Sbjct: 543 RLGAKTYEQAVGFMRI-FDGE--------DPFDQTPIHPESYPEAERFLTEL 585
>gi|42779356|ref|NP_976603.1| S1 RNA-binding domain-containing protein [Bacillus cereus ATCC
10987]
gi|42735271|gb|AAS39211.1| S1 RNA binding domain protein [Bacillus cereus ATCC 10987]
Length = 722
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 208/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAIEFINAEKEVQSAEEALQGAQDIIAEIVSDEAVYRSWIRNVTFRKGVMSSAV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YSYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ L ++D + PS+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIRDNDSKSAQYVK----LAIEDGYKRLIQPSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|82751666|ref|YP_417407.1| hypothetical protein SAB1948c [Staphylococcus aureus RF122]
gi|82657197|emb|CAI81637.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 716
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 147/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YEYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAAINPFGTFIA------------KGVIYPHPS 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+DIN A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDINTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYKLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSTLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|404481945|ref|ZP_11017174.1| competence protein ComEA helix-hairpin-helix repeat region
[Clostridiales bacterium OBRC5-5]
gi|404344915|gb|EJZ71270.1| competence protein ComEA helix-hairpin-helix repeat region
[Clostridiales bacterium OBRC5-5]
Length = 717
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 147/632 (23%), Positives = 262/632 (41%), Gaps = 137/632 (21%)
Query: 144 YKKRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVG 201
Y + EE+ ++ A+ +Q L D + K +E+A T VDD+ F
Sbjct: 60 YLRNLEEKKEQVLS----AIEEQGKLTDELKKEIESALTLVAVDDLYRPF---------- 105
Query: 202 VDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEM 261
RPKR T+ + GL A+ E+L Q +LE+ L D KE E
Sbjct: 106 -------RPKRRTRAMIAIEKGLENFATDI--YEEKLK-QPALEEAKKYLSD-KEGLE-- 152
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPTPDGDSAI 320
+ + + GA + A +IS + R +R + F + S +S
Sbjct: 153 --------VETHEDAIAGAMDIIAEKISDDAAFRNKIRDLSFKQGILTSVAKDETVESVY 204
Query: 321 DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC--KEH 378
++++ FA + + K + L I + EEEK+L V + P + + + C K+H
Sbjct: 205 ENYYNFA-------ESVSKTAGYKILAINRGEEEKILTVKLDPPVEEIIRYLEKCIIKKH 257
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
N+ E ILKD +D+ + PS+ ++ RS ++ +A+ + +GK
Sbjct: 258 -------------NEHTEQILKDTIDDAYKRLIAPSIERDIRSSLTEKAEDEAIKVFGKN 304
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
L + P A RV+ W P + ++D +G+V+D T +
Sbjct: 305 LTQLLMQPP-------------VAGRVV-LGWDPAFRTGCKLAVVDETGKVLD---TKVI 347
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYE-----IIFKM 548
+ + +SKK +E + K+ N+S SL + +I ++
Sbjct: 348 YPTAPQNKVAESKKILKELIKKY--------------NISLISLGNGTASRESEAVIVEL 393
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
++E +L + +E+ +Y S++++++ P + A ++ R L++PLA
Sbjct: 394 IKEVDT-------KLEYIIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLEDPLA 446
Query: 609 MVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+ + G G+ L L+ G++E D N+VG+D+N A
Sbjct: 447 ELVKIDPKSIGVGQYQHDMNQKKLSEALS-----GVVE----DCVNKVGVDLNTA----- 492
Query: 665 QFAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
APL ++ISG+ A ++ G+ TRK+ + LG K F GFLR+
Sbjct: 493 -SAPLLEYISGISKAVAKNIVVYREENGSFKTRKELLKVSKLGPKAFEQCAGFLRINDGK 551
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ LD T +HPESY ++L + +
Sbjct: 552 EP---------LDMTSVHPESYEATKKLLESI 574
>gi|302341581|ref|YP_003806110.1| Tex-like protein [Desulfarculus baarsii DSM 2075]
gi|301638194|gb|ADK83516.1| Tex-like protein [Desulfarculus baarsii DSM 2075]
Length = 776
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 208/497 (41%), Gaps = 78/497 (15%)
Query: 273 SQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWL 332
++A L GAR + A I+ +P VR +R +F V+ P + A + + W
Sbjct: 155 AEAALSGARDIMAEIINEDPAVRAEMRQLFETKGVMRAAVIPGKEEAGQKYRDY--FDW- 211
Query: 333 REKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWN 392
+PL + L +++ E+E +L + + PED + + Y++ G
Sbjct: 212 -SEPLASAPGHRVLAVRRGEKEDILSLRVAPPEDLAIAVL---ERRYVTGGP------CA 261
Query: 393 DQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDIT 452
+Q L +D L P+M EAR RA + + + L + P +K
Sbjct: 262 EQVRLAAQDCYKRLLGPAMETEARLSSKKRADDEAVRVFAENLRTLLMAPPLGQKA---- 317
Query: 453 PDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKND 509
VLA PG + V LD G ++ DV+F + D+Q +++
Sbjct: 318 --------VLAI--DPGFRTGCKVVCLDRQGNLLHHDVIFI---------LSDKQ-REDA 357
Query: 510 QERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGD 569
++ + + V +G N + + + + K+ + P +V +
Sbjct: 358 VAKVTALIEKYGSEAVAIG--NGTASRETESLLRGA-KLPGDPP-----------VVMVN 403
Query: 570 ESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLE 629
ES +Y S+++ + P V+ A ++GR L +PLA + + + S + +
Sbjct: 404 ESGASVYSASKLARQEFPELDVTVRGAASIGRRLMDPLAELVKI-----DPKSIGVGQYQ 458
Query: 630 NFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVR 689
+ + +E VM+ N VG+++N A Q L +SGLGP A ++
Sbjct: 459 HDVDQKSLKQSLEDVMLSCVNAVGVELNTA---SPQL--LGCVSGLGPSLAQNIVEHRAA 513
Query: 690 AGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQ 749
G +R+D + LG K F A GFLR+ R GQ + LD + +HPE+Y + +
Sbjct: 514 NGPFASRQDLLAVPRLGPKAFEQAAGFLRI-RGGQ--------NPLDASAVHPEAYPVVE 564
Query: 750 ELAKEVYNRDIEGDLND 766
+A RD+E + D
Sbjct: 565 AMA-----RDLECSVED 576
>gi|291547263|emb|CBL20371.1| Transcriptional accessory protein [Ruminococcus sp. SR1/5]
Length = 718
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 139/600 (23%), Positives = 252/600 (42%), Gaps = 123/600 (20%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + K +EAA+T V+D L+ P RPKR T+ + GL
Sbjct: 79 KLTPELKKQIEAAQTLVVVED------LYRP-----------YRPKRRTRAIIAREKGL- 120
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF--KCAMFNSSQAVLQGARHM 283
G ++ + LQ++ K+ EE A F + + + + GAR +
Sbjct: 121 ------GPLADIILLQMT-----------KKPLEEEAKAFLSEEKEVKTVEEAISGARDI 163
Query: 284 AAVEISCEPCVRKYVRSIFMDNAVV-STCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
A IS E R +R MD + ST S + ++ F E+P++K
Sbjct: 164 IAEHISDEADYRISIRKRTMDKGTICSTARDEKEQSVYEMYYDF-------EEPVKKLAG 216
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDA 402
+ L + + E+EK L V I PE+ + + K+ + D N +LK+A
Sbjct: 217 HRVLALNRGEKEKFLTVKILAPEEEIIRYLE--KQVIVRD---------NPYTTPVLKEA 265
Query: 403 LDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
+++ + P++ +E RS ++ A+ + +GK L + P A
Sbjct: 266 IEDSYKRLIGPAIEREIRSALTEAAEDGAIHVFGKNLEQLLMQPPI------------AG 313
Query: 459 PRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQSKKNDQERLLK 515
VL W P + ++D +G+V+D V++ T ++ + +E L K
Sbjct: 314 QVVLG--WDPAFRTGCKLAVVDPTGKVLDTTVIYPTAPT-------NETKIRAAKETLKK 364
Query: 516 FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRL 575
+ + HV ++ N + + + +II ++++E P V + V +E+ +
Sbjct: 365 LISKY--HVTLISVGNGTASRESE---QIIVELLKEIPEKVQY-------VITNEAGASV 412
Query: 576 YENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENF 631
Y S++++++ P + A ++ R +Q+PLA + + G G+ L
Sbjct: 413 YSASKLATEEFPNFDVGQRSAASIARRVQDPLAELVKIDPKSIGVGQYQHDMNQKKLGEA 472
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L G++E D N+VG+D+N A + L++ISG+ A ++ G
Sbjct: 473 LN-----GVVE----DCVNKVGVDLNTA-----SASLLEYISGISKAIAKNIVAYREENG 518
Query: 692 AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
TR++ + LG K F GF R+ G+ + LD T +HPESY A++L
Sbjct: 519 RFQTRRELLKVAKLGPKAFEQCAGFTRI-TGGK--------NPLDATSVHPESYDAAKKL 569
>gi|336064696|ref|YP_004559555.1| transcriptional accessory factor [Streptococcus pasteurianus ATCC
43144]
gi|334282896|dbj|BAK30469.1| prokaryotic transcriptional accessory factor [Streptococcus
pasteurianus ATCC 43144]
Length = 708
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 184/819 (22%), Positives = 332/819 (40%), Gaps = 193/819 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K DL++ I + LDL Q IPFIA YRKE +L +EV
Sbjct: 6 KIAQDLNLKESQIAKVLDLTS-QGNTIPFIARYRKEMTGNL------DEVQ--------- 49
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI DLDK L RK+ + + + EE+ + L
Sbjct: 50 ---------IKAIIDLDKSMTALTDRKATVLA----KIEEQGK-------------LTAE 83
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ K++E AE +V++ L+ P YK KR TK + +AGL+ +A
Sbjct: 84 LKKAIENAEKLADVEE------LYLP----------YKE-KRRTKATIAREAGLFPLA-- 124
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+L LQ K + E A+NF F ++ L GA + S
Sbjct: 125 ------RLILQ------------NKPSLEVEAANFITEGFETADKTLAGACEILIEAFSE 166
Query: 291 EPCVRKYV-RSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ +R +V I+ ++++ST D A D F EK + K + + L +
Sbjct: 167 DNQLRSWVYNEIWSYSSIISTVK----DEAADDNKTFQIYYDFSEK-VSKIQGYRILALN 221
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFS---DCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+ E+ +L+V + D + + K Y+ D ++K+ +
Sbjct: 222 RGEKLGILKVGFEHNIDKMVRFMGARFKNKNAYIDDVIAKT---------------IKKK 266
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
++P+M + S ++ A+ + + + L N + V P + K + +
Sbjct: 267 IVPAMERRVHSELTESAEDGAIELFSENLRNLLLVSPLKGK--------------MVLGF 312
Query: 467 GPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
P + ++D +G+++ + SQ + +QSKK+ L + + + ++
Sbjct: 313 DPAFRTGAKLAVVDQTGKLMTTQVIYPVPPASQ-AKIEQSKKD----LAELIRTYGVEII 367
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+G S S + + +++ P ++S V +ES +Y S ++ +
Sbjct: 368 AIGNGTASRES-----EAFVAQALKDFP--------DVSYVIVNESGASVYSASELARHE 414
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKY 638
P + A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 415 FPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLAENLDF------- 467
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
V+ V NQVG++IN A A L +SGL + ++ + G I +R+D
Sbjct: 468 -----VVDTVVNQVGVNINTA-----SPALLAHVSGLNKTISENIVKYRDENGRIASRED 517
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
LG K F A GFLR+ + ++LD+T +HPESY + L KE+
Sbjct: 518 IKKVPRLGAKAFEQAAGFLRIPGAE---------NILDNTGVHPESYKAVEHLLKEL--- 565
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
++ D +D+ ++ ++ V ++T +I + ETL I +L+ +
Sbjct: 566 ----NITDLDDSAKIKLQSVS-----IETMAETINIGQ-------ETLKDIIADLLKPGR 609
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
D R+ ++ P ++ IS L G+ ++ TVR V
Sbjct: 610 DLRDDFEAPVLRQDVLDISD-----LEIGQKLEGTVRNV 643
>gi|418871101|ref|ZP_13425488.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
IS-125]
gi|375369035|gb|EHS72926.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
IS-125]
Length = 655
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 78 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 137
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 138 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 191
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 192 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 245
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 246 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 289
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 290 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 338
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 339 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 393
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 394 GVGQYQHDVNQKALENALT---------FVVETAVNQVGVDVNTA-----SSSLLQYVSG 439
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 440 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 490
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 491 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 545
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 546 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEG 582
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 583 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 641
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 642 NKDKVSLTM 650
>gi|320107286|ref|YP_004182876.1| Tex-like protein [Terriglobus saanensis SP1PR4]
gi|319925807|gb|ADV82882.1| Tex-like protein [Terriglobus saanensis SP1PR4]
Length = 750
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 160/717 (22%), Positives = 284/717 (39%), Gaps = 131/717 (18%)
Query: 142 SYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVG 201
SY++ E +RR T +A +L D + + A E++D+ L +
Sbjct: 66 SYFR---ELLARRDTILTSIAEQGKLTDELKARILATLDRSELEDLYLPY---------- 112
Query: 202 VDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEM 261
RPKR TK + + GL +A Y Q L L ++ L DP++ E+
Sbjct: 113 -------RPKRRTKATIAREKGLEPLAV---YLWAQEPAALGLVELAQSLVDPEK---EV 159
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAID 321
A+ + L+GARH+ A IS + +RK R + + ++ + + D +
Sbjct: 160 AT---------IEDALEGARHIVAEMISEDAEIRKAARHLMFEEGMIVSHKSFDAKDEQE 210
Query: 322 SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLS 381
F + + +P++ + L +++ E E +L I+L E + L + H L
Sbjct: 211 KFKMY----YEYREPVKTIPSHRMLAVRRGEGENVLYWLIELEEPRILGLL---RSHVL- 262
Query: 382 DGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
++ W L + D L S+ E R + R+ + + + + L + +
Sbjct: 263 ----RTTGDWTPHLNLAIDDCWKRLLNSSIQGELRLELKRRSDTDAIQVFRENLQHLLLA 318
Query: 442 GPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCLTLRSQ 498
P A P + PG + ++D +G+ + DV++
Sbjct: 319 AP-------------AGP-ISVLGIDPGLRTGCKIAIVDETGKFLAHDVIYP-------- 356
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ N+ + L +M + H V A+ S + D + F ++E+
Sbjct: 357 ----HTGRTNEATQKLDAVM--KSHNVRAIAIGNGTASRETDAFVRDF-LLEK------- 402
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGR 618
+++ + V ES +Y S I+ + P V+ A+++ R LQ+PL+ + +
Sbjct: 403 KLENVFRVTVSESGASIYSASDIARQEFPDLDLTVRGAISIARRLQDPLSELVKV----- 457
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
+ S + ++ + + +E V+ N+VG+D+N A W L++++G+ R
Sbjct: 458 DPKSIGVGQYQHDVDQRQLQQSLETVIESCVNRVGVDLNTA---SWTL--LRYVAGISER 512
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ G +R G+G K F A GFLR+R Q LD T
Sbjct: 513 IALNIVSFRDTNGRFRSRNQLHEVSGIGPKTFEQAAGFLRIRDGEQP---------LDST 563
Query: 739 RIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKK 798
+HPESY L +E+A+ + E LN P LL K K
Sbjct: 564 AVHPESYALVEEIAQSIGTPVSELILN----------------PHLLG--------KVNK 599
Query: 799 RENKRETLYL--IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQAT 853
E K + L I EL +D R+Q+ PS E I+ + EG V T
Sbjct: 600 NEFKAGSFTLNDILEELRKPGRDPRDQFVAPSFSETVRDIADVQPGMVLEGVVTNVT 656
>gi|418320055|ref|ZP_12931419.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus VCU006]
gi|365228371|gb|EHM69555.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus VCU006]
Length = 716
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 146/672 (21%), Positives = 271/672 (40%), Gaps = 113/672 (16%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQELAKEV--YNRDIEGD--------LNDDEDALEMAIEHVRDRPDL 784
LD+T IHPESY + +L ++ D+ D LN DE A+E+ +
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLNSLNMDELAIELQV--------- 602
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L+ IK K N+ D R++++ P + I + L
Sbjct: 603 -GVPTLEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDL 640
Query: 845 AEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
EG + TVR V A + G++ S + + + D + GDI+ I S
Sbjct: 641 QEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYS 699
Query: 905 IQKNRYQVFLVC 916
I KN+ +V L
Sbjct: 700 IDKNKDKVSLTM 711
>gi|238018731|ref|ZP_04599157.1| hypothetical protein VEIDISOL_00575 [Veillonella dispar ATCC 17748]
gi|237865202|gb|EEP66492.1| hypothetical protein VEIDISOL_00575 [Veillonella dispar ATCC 17748]
Length = 774
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 163/770 (21%), Positives = 308/770 (40%), Gaps = 122/770 (15%)
Query: 151 ESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRP 210
E+RR + +++ D + KSLEAA +E++D+ L + RP
Sbjct: 66 ETRRQEIIASITEQEKMTDELMKSLEAATKLQELEDLYLPY-----------------RP 108
Query: 211 KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMF 270
K+ T+ + GL +A + G P E+A F
Sbjct: 109 KKRTRAMIARERGLEPLAEMILNDTVTSG-----------------DPLEIAKEFVTEEV 151
Query: 271 NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDS-FHQFAGV 329
+ + +QGA + A +S R Y+R + + T GD I F Q+A
Sbjct: 152 PTPEDAIQGASDIVAEIVSDSADFRAYLRKKMWNEGFIQAELT--GDEEIQQQFLQYA-- 207
Query: 330 KWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ 389
+++ +P+R+ + L + + E+ L++ + +P D+ Y+ + K+ +
Sbjct: 208 EYV--EPVRQMPSHRILAVNRGEKLGALKLALTVPGDTYVA--------YMVQRLEKNPK 257
Query: 390 -LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
++ D + + DA + P++ ++ R+ ++ A + +G L N + P
Sbjct: 258 SIFADYKAAAVADAYKRLIFPALERDIRNELTENADEQAIKVFGVNLKNLLLQPPL---- 313
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
A V+ PG + ++D G V+D G L + ++++K
Sbjct: 314 ---------AGHVI-MGLDPGYRTGCKMAIIDQQGNVLDY---GAYYLTNSEKLRKEAQK 360
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+++ KF V L ++ S + + + M+EE D + +
Sbjct: 361 VLADKIRKFK-------VTLLSIGNGTASYETE--QFASTMIEEEKLDCHY-------II 404
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
+E+ +Y S+++ D+LP ++ AV++ R +Q+PLA + + S +
Sbjct: 405 TNEAGASVYSASKLAIDELPDLDVTIRGAVSIARRVQDPLAESVKI-----DPKSIGVGQ 459
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
++ + + ++QV+ V N VG+++N A A LQ I+G+ A ++
Sbjct: 460 YQHDVNQKQLTHTLDQVVETVVNHVGVELNTA-----SPAILQHIAGISSTVAKNIVAYR 514
Query: 688 VRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGL 747
G +RK+ + LG F GFLR++ LD+T +HPESY L
Sbjct: 515 QENGVFKSRKELLKVPRLGPAAFTQCAGFLRLQHGKNP---------LDNTSVHPESYEL 565
Query: 748 AQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLY 807
A+ + E + L D +D ++ V K L+D K + T+
Sbjct: 566 AERIIGE-----LGFTLKDLQDKAQLEALQV-------KLPLVDAEKMAAKLDAGVPTVR 613
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLE 867
I L +D R P + +++S E + G VV+ TV V A
Sbjct: 614 DILAALAKPGRDPREDLPAPLTRK--HVVSLE---DIKVGTVVKGTVHNVVDFGAFVDFG 668
Query: 868 SGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
G+L + + + + SD L GDI+ +I S+ R ++ L +
Sbjct: 669 LKTNGLLHRSELCNSRQHP--SDVLAVGDIIEAQIISVDVKRNRIGLSVK 716
>gi|359458889|ref|ZP_09247452.1| S1 RNA-binding domain-containing protein [Acaryochloris sp. CCMEE
5410]
Length = 720
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 160/755 (21%), Positives = 283/755 (37%), Gaps = 179/755 (23%)
Query: 54 HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT 113
+LSIS + LDL + IPF+A YRKE
Sbjct: 10 QELSISPQRLQNALDLFA-EGATIPFVARYRKERT------------------------- 43
Query: 114 LKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK 173
+D+ L R+ + + Y EE + I D +A +L + +
Sbjct: 44 ----------GQMDETQL----RQLSERFTYLTELEERKKTILDS--IAQQNKLTEPLQA 87
Query: 174 SLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS---K 230
+EA + E++D+ L + RPKR T+ + + GL +A
Sbjct: 88 KIEACLLKTELEDLYLPY-----------------RPKRRTRATIAKEKGLEPLAQWLQA 130
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+ L L+ E A+ + +++ LQGA + A I+
Sbjct: 131 LNKPTATLSQDLATE----------------AARYINKDVATAEDALQGASDILAEGIAD 174
Query: 291 EPCVRKYVRS-IFMDNAVVSTCPT--PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL 347
+ +R ++++ F VS + P+G + + + + + + L
Sbjct: 175 QAEIRAHLKNRFFQVGEFVSQVKSKYPEGSTKFEMYRSY-------QARAKNIPAHNLLA 227
Query: 348 IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
+ + E E +L+V + E+ ++ D +E + + + + ++KDA +
Sbjct: 228 LYRGEAEGILKVELATDEE---RILGDMEERVIRSKIRAVRDFFRE----VVKDAYTRLI 280
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
PS+VKE R+ A S + + L + P K P P C
Sbjct: 281 KPSVVKEVRAACKAEADSESIQTFATNLRELLLSSPAGMK-----PTLGIDPGFRTGC-- 333
Query: 468 PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
V LD +G+ ++ + ++ RDQ +K + + + +Q ++ +
Sbjct: 334 ------KVVALDHTGKFLE--YQAIFPHQAARQRDQAAKT-----VARLIQTYQIDLIAI 380
Query: 528 GAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
G N + D + K ++ P V +ES +Y S I+ + P
Sbjct: 381 G--NGTAGRETDAFVADVLKTLDRKPIKV----------MVNESGASIYSASEIAIAEFP 428
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATL----CGPGR-------EILSWKLCPLENFLTPDE 636
V+ A+++ R LQ+PLA + L G G+ ++L KL
Sbjct: 429 DLDITVRGAISIARRLQDPLAELVKLDPKSIGVGQYQHDVDQKLLKQKL----------- 477
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTR 696
E+ + N VG+D+N A +E L F+SG+ A ++ GA R
Sbjct: 478 -----EETVESCVNYVGVDLNTA-SKEL----LTFVSGITGAIANNIITYRNENGAFKNR 527
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY 756
K + LG K F A GFLR+R LD+T +HPESYG+ + +++
Sbjct: 528 KQLLKVAKLGPKAFEQAAGFLRIRTGDNP---------LDNTAVHPESYGVVKTISE--- 575
Query: 757 NRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
D+E L+ ++A RP L TY+ D
Sbjct: 576 --DLELPLS------QIAEIPAHLRPGDLNTYVTD 602
>gi|418639364|ref|ZP_13201612.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-3]
gi|375017587|gb|EHS11197.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-3]
Length = 716
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 208/497 (41%), Gaps = 71/497 (14%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SLSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL 751
LD+T IHPESY + +L
Sbjct: 552 LDNTSIHPESYKVTYQL 568
>gi|296274213|ref|YP_003656844.1| Tex-like protein [Arcobacter nitrofigilis DSM 7299]
gi|296098387|gb|ADG94337.1| Tex-like protein [Arcobacter nitrofigilis DSM 7299]
Length = 702
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 120/527 (22%), Positives = 233/527 (44%), Gaps = 81/527 (15%)
Query: 251 LEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
L+ K+ EE A +F S L+GA + A + + ++ VR+ +++ + T
Sbjct: 131 LKYSKKECEEKAKSFLNKEVTSVDIALKGASDIIAQRYADDFKSKEIVRNNILNHGTLQT 190
Query: 311 CPTPDGDSAIDSFHQ---FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS 367
PT +F++ + + + EK ++ + ++L I +A EK L I++ ED
Sbjct: 191 KPTK-------TFNENGLYKNLANINEK-IKYIKSYRFLAINRATNEKELTFKIEVDEDF 242
Query: 368 LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWL 427
+ + + K++ + + S++L + KD L LLPS+ +EA +++ +A
Sbjct: 243 ICE---NIKKYKIPTWANSSSELVYEAY----KDGLKRLLLPSLKREAITILKEKASYEA 295
Query: 428 LMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG--PGKPETTFVMLDSSGEVV 485
+ +GK L K+ +TP P V G PG +G V
Sbjct: 296 INLFGKNL-----------KELLLTP-----PLVNQTILGIDPGF---------RTGCKV 330
Query: 486 DVLFTGCLTLRSQNVRDQQSKK---NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIY 542
V+ L L S + + K+ N + LL + H+ + + +G S ++
Sbjct: 331 AVISDDGLFLDSAVIYPTKPKEDFANSAKTLLALIKKHKVNSIAIGNGTAS-----NETA 385
Query: 543 EIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRY 602
+ ++E+ DV + ++V E +Y S+I++++ P ++ A+++
Sbjct: 386 SFVSNFIKENSLDV-----KFAVV--SEIGASVYSASKIANEEYPQLDVTIRGAISIASR 438
Query: 603 LQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHR 662
L++P+A + + P S + ++ + + +E V +D+ N+VG+DIN A
Sbjct: 439 LRDPMAALVKI-DPK----SLGIGQYQHDVNQKDLASKLENVTIDLVNKVGVDINSA--- 490
Query: 663 EWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRS 722
+ L F+SG A ++ + ++K+ + G+G K + VGFLR++
Sbjct: 491 --SYKLLSFVSGFSETMAKNIIAHREKIKKFKSKKELLDVKGIGSKAYEQGVGFLRIKDG 548
Query: 723 GQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED 769
+LD+T IHPE+Y L L K+ DI+ ND E+
Sbjct: 549 SS---------ILDNTAIHPENYALVNTLQKKYKIEDIKA--NDIEN 584
>gi|260655209|ref|ZP_05860697.1| protein YhgF [Jonquetella anthropi E3_33 E1]
gi|260630131|gb|EEX48325.1| protein YhgF [Jonquetella anthropi E3_33 E1]
Length = 722
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 162/715 (22%), Positives = 270/715 (37%), Gaps = 159/715 (22%)
Query: 49 SPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDF 108
+P+ +L ++ + LL + +PFIA YRKE+ +L +EV
Sbjct: 5 TPQIARELQLAPQAVEAVAQLLD-EGATVPFIARYRKEKTGNL------DEV-------- 49
Query: 109 ERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF 168
+ AI D K L RK A+ +R L
Sbjct: 50 ----------AITAIRDGLAKAAELASRKDAILKSLAER-----------------NLLT 82
Query: 169 DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVA 228
D + ++E A T ++D L + RPKR T+ ++ +AGL +A
Sbjct: 83 DELKAAVEGASTMTALEDTYLPY-----------------RPKRRTRATAAREAGLEPLA 125
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEI 288
E +DP+ S K +A L GAR + A I
Sbjct: 126 RLLFAQGE---------------DDPQAAAAAFVSEEKG--VADVEAALSGARDIIAEWI 168
Query: 289 SCEPCVRKYVRSIFM------DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
S + R+ +R +F+ V + P+ + D F W LR
Sbjct: 169 SEDVKARQEMRGVFVRFGRCESTVVEAKKDEPEAATYQDYFD------W--SDSLRFVPS 220
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDA 402
+ L + E E L V I+ P D + L + ++ + S Q+ ++D+
Sbjct: 221 HRLLAALRGEREGYLSVRIR-PSDQVALL--TLRRLFIKGEGAASGQVTA-----AIEDS 272
Query: 403 LDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVL 462
L PSM EAR+++ RA + + + + L + P+ A VL
Sbjct: 273 YKRLLGPSMENEARAMLKKRADTEAIAIFARNLRQLLMASPF------------GARAVL 320
Query: 463 ACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
A PG + V LD++G ++ DV+F Q DQ K R + +
Sbjct: 321 AV--DPGVRTGCKVVALDATGALLAHDVIFI-------QRGADQLEKAAAIIR--QLISK 369
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
H P V +G N + + D G +D + ++ ES +Y S
Sbjct: 370 HSPLAVAVG--NGTASRETVDFLN-------------GLSLD-IPVLVVSESGASVYSAS 413
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
+ +LP Q V+ AV++GR L +PLA + + + + ++ + +
Sbjct: 414 EEARKELPDQDVTVRGAVSIGRRLMDPLAELVKIDPKAIGVGQY-----QHDVDQKQLRE 468
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
++ ++ N VG+D+N A R L ++SGL + A + G +R
Sbjct: 469 SLDDTVISCVNSVGVDLNTASPRL-----LSYVSGLSDKLARGIVAHREANGPFTSRSAL 523
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+ LG K + A GFLRVR S I+ LD + +HPE+Y L ++A +
Sbjct: 524 LDVPRLGPKTYQQAAGFLRVRNS---------INPLDASAVHPENYKLVGQMASD 569
>gi|419720386|ref|ZP_14247622.1| Tex-like protein N-terminal domain / helix-hairpin-helix domain /
S1 RNA binding domain multi-domain protein
[Lachnoanaerobaculum saburreum F0468]
gi|383303486|gb|EIC94935.1| Tex-like protein N-terminal domain / helix-hairpin-helix domain /
S1 RNA binding domain multi-domain protein
[Lachnoanaerobaculum saburreum F0468]
Length = 717
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 153/687 (22%), Positives = 280/687 (40%), Gaps = 160/687 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE SL ND+ R ++ + L + +L+ +K+
Sbjct: 32 IPFISRYRKEVTGSL-------------NDEILR----QFDERLRYLRNLE------EKK 68
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
L + EE ++ DE R + +EAA T VDD+ F
Sbjct: 69 NQVLSAI------EEQGKLTDELR------------RDIEAANTLVAVDDLYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + GL A+ + EK+ E+E KE
Sbjct: 106 ------------RPKRRTRAMIAVEKGLEAFAN-----------DIFEEKL--EIEAIKE 140
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPTPD 315
+ ++ + + A+ GA + A +IS + R +R + F ++S
Sbjct: 141 AKKYLSDKEGLEVETEADAI-AGAMDIIAEKISDDAGFRNKIREMSFKQGILMSAAKDET 199
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S ++++ FA + + K + L I + E+EK+L V + P + + +
Sbjct: 200 TESVYENYYNFA-------ESVSKAAGYKILAINRGEDEKILTVKVDPPLEDIIR----- 247
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEY 431
YL + K + +Q ILKD +D+ + PS+ ++ RS ++ A+ + +
Sbjct: 248 ---YLERNIIKKHNKFTEQ---ILKDTIDDAYKRLIAPSIERDIRSSLTEAAEDEAIKVF 301
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFT 490
GK L + P + + W P + ++D +G+V+D T
Sbjct: 302 GKNLTQLLMQPPVTGR--------------VVLGWDPAFRTGCKLAVVDETGKVLDT--T 345
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKD-----DIYEII 545
QN + + +KK +E + K+ N+S SL + + II
Sbjct: 346 VIYPTAPQN-KVEAAKKVLKELIKKY--------------NISLISLGNGTASRESESII 390
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
++++E +L + +E+ +Y S++++++ P + A ++ R L++
Sbjct: 391 VELIKEVDT-------KLEYIIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLED 443
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PLA + + P S + ++ + + + V+ D N+VG+D+N A
Sbjct: 444 PLAELVKI-DPK----SIGVGQYQHDMNQKKLSEALGAVVEDCVNKVGVDLNTA------ 492
Query: 666 FAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
APL ++ISG+ A ++ G+ TRK+ + LG K F GFLR+ +
Sbjct: 493 SAPLLEYISGISKAVAKNIVVYREENGSFKTRKELLKVSKLGPKAFEQCAGFLRINDGKE 552
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQEL 751
LD T +HPESY ++L
Sbjct: 553 P---------LDMTSVHPESYSATKKL 570
>gi|298372981|ref|ZP_06982971.1| S1 RNA binding domain protein [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275885|gb|EFI17436.1| S1 RNA binding domain protein [Bacteroidetes oral taxon 274 str.
F0058]
Length = 704
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 148/706 (20%), Positives = 282/706 (39%), Gaps = 154/706 (21%)
Query: 56 LSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLK 115
L+IS + + LL + IPFIA YRKE SL +EV
Sbjct: 10 LNISERQVANVIKLLD-EGATIPFIARYRKEATRSL------DEV--------------- 47
Query: 116 WHKVLWAIHDLDKKWLLLQ---KRKSALQSYYKKRYEEESRRIYDETRLALNQQ--LFDS 170
I D+D+++ LLQ KRK+ + + A+ +Q L +
Sbjct: 48 ------VIADIDREYRLLQEIIKRKTTIMA-------------------AIEEQGHLTEQ 82
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ + +E E++D+ + F +P+R T+ + GL +A
Sbjct: 83 LRQRIEVCFDRNELEDIYMPF-----------------KPRRRTRAQIAVERGLEPLAK- 124
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
++ + GD E++A + S++ + GA + A +S
Sbjct: 125 ------------TIIRQGDR------NIEQIAEKYVAGEVASAEMAIDGASDIIAENVSE 166
Query: 291 EPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQK 350
VR VR +F A++++ D+ + + + PL++ L I++
Sbjct: 167 NSYVRNAVRRLFAAEAIITSKLVKGKDAEGQKYKDY----FDYSSPLKRIRSHTLLAIRR 222
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPS 410
AE E L+V I + +++ + + Y G S + + D+ + PS
Sbjct: 223 AEAEGCLKVDISV---DIDRAINRIETVYAKGGNSMCGTVRAA-----IADSYKRLIKPS 274
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG- 469
+ E +L RA + + + L + P +K RVLA PG
Sbjct: 275 IETEMAALSKERADREAIDIFAENLRQLLLAPPLGQK------------RVLAI--DPGF 320
Query: 470 KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA 529
+ V+L+ G D+L + + ++ + +L+ + ++ + +G
Sbjct: 321 RTGCKVVILNEQG---DLLHNETIYPHPPVYKAYEASR----KLVSLVEAYKVSAIAIG- 372
Query: 530 VNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQ 589
+ T+ ++ E R + +D + + +ES +Y S+ + ++ P
Sbjct: 373 ---NGTAGRE---------TENFVRKIRFTVDGIEVFSVNESGASIYSASKTAREEFPDY 420
Query: 590 KGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
V+ AV+LGR L +PLA + + P S + ++ ++ +++V+
Sbjct: 421 DVTVRGAVSLGRRLIDPLAELVKI-DPK----SIGVGQYQHDVSQKALKESLDRVVESCV 475
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG++IN A L +ISG+G A ++ R G +R++ + +G K
Sbjct: 476 NSVGVNINTA-----SKYLLTYISGIGESLAQNIVRYRAENGEFRSRRELMKVPKMGAKS 530
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
F GFLRV + A++ LD+T +HPESY + Q++A ++
Sbjct: 531 FEQCAGFLRV----EGATNP-----LDNTAVHPESYPIVQKMADDL 567
>gi|408371981|ref|ZP_11169734.1| Tex-like protein [Galbibacter sp. ck-I2-15]
gi|407742593|gb|EKF54187.1| Tex-like protein [Galbibacter sp. ck-I2-15]
Length = 709
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 154/706 (21%), Positives = 282/706 (39%), Gaps = 154/706 (21%)
Query: 57 SISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKW 116
SI + I ++LL Q IPFI+ YRKE N D+ +
Sbjct: 13 SIEKKSIQNTVNLLD-QDCSIPFISRYRKE--------------TTGNLDEVQ------- 50
Query: 117 HKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLE 176
+ + + K++ L+ RK ++ K EE+++ L QL I S E
Sbjct: 51 ---IGDVSNFKKEFEALEARKLSIL----KSIEEQNQ---------LTDQLKSQIENSQE 94
Query: 177 AAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
A E +L+ P YK+ R TK + + GL +A
Sbjct: 95 IAVLE----------DLYLP----------YKKS-RKTKADTAIEHGLEPLA-------- 125
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
++ + + +L+ +A + +S++ L+GAR + A I +RK
Sbjct: 126 ----KIIMAQNATDLDS-------IAQRYTSKHISSTEMALEGAREIIAQWIKERLDIRK 174
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG-VKWLREKPLRKFEDAQWLLIQKAEEEK 355
+R F V+ T +++ ++ + + W +P+ K + L I +A+
Sbjct: 175 QLRRQFERYGVLQTKKVEATENSSEAAQKHSDYFNW--NEPIAKCPSHRLLAILRAQALG 232
Query: 356 LLQVTIKLPED-SLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
+++ +++ +L ++S V KS L +Q EL KDA L P++ KE
Sbjct: 233 FIKIKVEIDNKRALEIIYSR---------VIKSQNLCAEQIELAAKDAYKRGLYPALSKE 283
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPET 473
A SL +A + + K L + P K R+LA PG K
Sbjct: 284 ALSLAKEKADDTAIAVFEKNLTQLLLSPPLGEK------------RILA--LDPGFKSGC 329
Query: 474 TFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLS 533
V LD G + L ++ + +K + + K + + + A+
Sbjct: 330 KLVCLDQKG----------VLLHNETIYPHPPRKEASQAIKKMLTLVNAYKIEAIAIGNG 379
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
S + E+ + +G E + + E+ +Y S+I+ + P V
Sbjct: 380 TAS----------RETEQLIKRIGFE-KPIEVFVVSEAGASVYSASKIARAEFPNYDVTV 428
Query: 594 KRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ AV++GR L +PLA + + G G+ L+ L ++V+
Sbjct: 429 RGAVSIGRRLSDPLAELVKIDAKSIGVGQYQHDVDQVKLQQRL---------DRVVESCV 479
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N+VG+++N A + L+++SG+G + A ++ GA +RK+ + LG+K
Sbjct: 480 NKVGINLNTA-----SSSLLKYVSGIGEKLAENIIDYRENNGAFTSRKELLKVARLGEKA 534
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ + GFLR++ LDD+ +HPE Y L +++AK++
Sbjct: 535 YEQSAGFLRIKNPSNP---------LDDSAVHPERYQLVKQMAKDL 571
>gi|297544051|ref|YP_003676353.1| Tex-like protein [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841826|gb|ADH60342.1| Tex-like protein [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 712
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 179/850 (21%), Positives = 352/850 (41%), Gaps = 184/850 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ++ +N +++ L + +L++K
Sbjct: 32 IPFIARYRKEATGSLSDEVLRN-----------------FYERLTYLRNLEEK------- 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++++ R+ DE +L + I + +E A T +EV+D+ F
Sbjct: 68 ------------KQDTIRLIDE-----QGKLTEEIKEKIENATTLQEVEDIYRPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
R KR T+ + + GL +A K S+E + GD
Sbjct: 106 ------------RQKRRTRATIAKEKGLEPLA-KIISSNEVMN--------GD------- 137
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+E A + + + QGA + A +IS + +RKY+R+ +N ++ T
Sbjct: 138 -VKEYAKPYLNENVLTVEEAYQGAMDIIAEDISDDAEIRKYIRNFTWNNGIIVTQALKKE 196
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDC 375
S + ++ + ++ ++ + L I +AE EK + V I++ E +NKL
Sbjct: 197 KSPYEMYYDY-------KEAVKTIPPHRILAINRAEREKYISVKIEVDSERIINKL---- 245
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ V+K A ++ + + ++D+ + PS+ +E R+ ++ +A+ ++ + + L
Sbjct: 246 ----IETKVNK-ASIFAEYYKRAIEDSYKRLIAPSIEREIRNALTEKAEEKAIIVFKENL 300
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ + P + + + P + ++D +G+++D
Sbjct: 301 KSLLLQPPIKGH--------------VVMGFDPAYRTGCKIAIVDETGKLLDT--ATIYP 344
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
QN D K +LK +++ + V L A+ S + +++ I +++E R
Sbjct: 345 TPPQNDIDNSKK------VLKELIEK--YNVTLIALGNGTASRESEMF--IADLIKELSR 394
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
+V + V +E+ +Y S I++++ P +++ A++L R LQ+PLA + +
Sbjct: 395 EVKY-------VIVNEAGASVYSASPIATEEFPDINVSLRGAISLARRLQDPLAELVKID 447
Query: 614 ---CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G+ ++ KL N G++E D N VG+D+N A +
Sbjct: 448 PKSIGVGQYQHDVDQKKLGEALN--------GVVE----DCVNSVGVDLNTA-----SVS 490
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L+++SG+ A ++ + G +R+ LG+ F GFLR+
Sbjct: 491 LLKYVSGINTAIAKNIVEYRNQIGKFTSREQLKNVKRLGEATFTQCAGFLRILEGD---- 546
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV-YNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
++ D T +HPE Y ++L K+ Y ++ + + ++D + L+
Sbjct: 547 -----NIFDSTAVHPERYETLEKLLKKFGYKKET------------LDRKKLKDFANSLE 589
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
Y L+R +E + TLY I EL +D R +P + I + L
Sbjct: 590 EYGLERISEE--YDIGLPTLYDIVSELKKPGRDPREDLPKPILRSDVMTI-----NELKP 642
Query: 847 GRVVQATVRRVQGQRAICVLESGLA--GMLMKEDYSDDWRDSELSDKLHEGDILTCKIKS 904
G + TVR V C ++ G+ G++ + S + L D + GDI+ K+ +
Sbjct: 643 GMELMGTVRNVTDFG--CFVDIGVHTDGLVHISEMSQSYIKHPL-DVVAVGDIVKVKVLN 699
Query: 905 IQKNRYQVFL 914
+ R ++ L
Sbjct: 700 VDLERNRISL 709
>gi|325282032|ref|YP_004254574.1| Tex-like protein [Odoribacter splanchnicus DSM 20712]
gi|324313841|gb|ADY34394.1| Tex-like protein [Odoribacter splanchnicus DSM 20712]
Length = 714
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 150/705 (21%), Positives = 276/705 (39%), Gaps = 167/705 (23%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
+ LDL + IPFIA YRKE+ N D+ +
Sbjct: 22 VRNLLDLFA-EGATIPFIARYRKEK--------------TGNMDEVR----------IGE 56
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
I L ++ L+KRK+A+ +++ ++L + K + R
Sbjct: 57 IKTLYTQFQELEKRKNAVLDTIREQ-----------------EKLTPGLEKQI------R 93
Query: 183 EVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQL 242
E D+ + +L+ P +PK+ T+ + GL E L L
Sbjct: 94 ECQDIRILEDLYLP-----------FKPKKQTRAAKAKAKGL-----------EPLAALL 131
Query: 243 SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF 302
++ GD A+ F ++ LQGAR + A ++ R VR +
Sbjct: 132 MRQENGD--------IAVKAARFVKGEIQDTEEALQGARDIMAEWVNESEAARNRVRRLL 183
Query: 303 MDNAVVSTCPTP----DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQ 358
AV++ +G+ D F+ ++ L++ + L I++ E E +L+
Sbjct: 184 EREAVITAKVVKGKEQEGEKYTDYFN--------FQESLKRCPSHRILAIRRGEAEGILK 235
Query: 359 VTIKLPEDSLNKLFSDCKEHYLSDGVSKSA-QLWNDQRELILKDALDNFLLPSMVKEARS 417
V++ + E++ K E G ++SA Q+W L +KD L PS+ E +
Sbjct: 236 VSLSIDEENALKNL----ERIFIKGDNESARQVW-----LAMKDGYKRLLFPSIEAEYMT 286
Query: 418 LMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFV 476
L +A S + + + L + P K RVLA PG + V
Sbjct: 287 LSKQKADSEAIRVFAENLRQLLLASPLGNK------------RVLAI--DPGFRTGCKVV 332
Query: 477 MLDSSGEVVDVLFTGCLTLRSQNVRDQQSK---KNDQERLLKFMMDHQPHVVVLGAVNLS 533
LD +G++V ++N+ + K ++ + + + +G
Sbjct: 333 CLDETGKLV----------HNENIYPHPPRNEYKQAAAKVTNMVATYDIQAIAIGNGTAG 382
Query: 534 CTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
+ K F R V + ES +Y S+I+ ++ P V
Sbjct: 383 RETEK-------FIQTLRFDRKV-------QVFVVSESGASVYSASKIAREEFPEYDVTV 428
Query: 594 KRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM---IEQVMVDVTN 650
+ AV++GR L +PLA + + K + + ++ G+ +++V+ N
Sbjct: 429 RGAVSIGRRLMDPLAELVKI--------DPKSIGVGQYQHDVDQGGLKEALDRVVESCVN 480
Query: 651 QVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVF 710
+VG+++N A L +ISGLGP A ++ + GA+ +R++ +G K F
Sbjct: 481 KVGVNVNTASK-----YLLTYISGLGPALAENVVAYIQENGALKSREELKKVKRMGAKAF 535
Query: 711 VNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ GFLR+ +G LD++ +HPESY + +++A+++
Sbjct: 536 EQSAGFLRIEGAGNP---------LDNSAVHPESYYIVEKMARDL 571
>gi|423224789|ref|ZP_17211257.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides cellulosilyticus CL02T12C19]
gi|392634539|gb|EIY28458.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides cellulosilyticus CL02T12C19]
Length = 710
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 125/557 (22%), Positives = 222/557 (39%), Gaps = 104/557 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + GL E L L L++ + PE+ A +
Sbjct: 107 KPKRRTRAEVARQKGL-----------EPLATLLMLQR--------EPNPEKRAEAYVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
++ L+GAR + A ++S + R VR F AV++ ++ D + +
Sbjct: 148 EVKDAEDALKGARDIIAEQVSEDEQARNTVRFAFSRQAVITAKVVKGKETEADKYRDY-- 205
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ KPL+K Q L I++AE E LL+V+I P+D +C E L +S
Sbjct: 206 --FEFNKPLKKCTSHQLLAIRRAEAEGLLKVSIS-PDDE------ECVER-LERRFVRSN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+Q ++DA L S+ E + +A + + + L + P +K
Sbjct: 256 NACGEQVAEAVQDAYKRLLKSSIETEFAAQSKEQADEEAIRVFVQNLRQLLLASPLGQK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + + LD+ G + L ++N+
Sbjct: 315 -----------RVMG--IDPGFRTGCKVICLDAQGNL----------LHNENIYPHAPVH 351
Query: 508 NDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM--DE 562
E ++ K + +Q + +G N + + +D + H+ +
Sbjct: 352 KTAEAVSKIQKMVEAYQIEAIAVG--NGTASRETEDFLK--------------HQTFRQD 395
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ + E +Y S+I+ D+ P V+ AV++ R L +PLA + + G G+
Sbjct: 396 IQVFVVSEQGASIYSASKIARDEFPEYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVGQ 455
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L + + N VG+++N A L +ISGLGP+
Sbjct: 456 YQHDVDQTKLKKSL---------DLTVESCVNLVGVNLNTASSH-----LLTYISGLGPQ 501
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ GA +RK + +G K F GFLR+ Q + LD+T
Sbjct: 502 LAQNIVNYRAENGAFTSRKQLMKVPRMGAKAFEQCAGFLRI---------PQAENPLDNT 552
Query: 739 RIHPESYGLAQELAKEV 755
+HPESY + +++AK++
Sbjct: 553 AVHPESYCIVEQMAKDL 569
>gi|384513047|ref|YP_005708140.1| YhgF like protein [Enterococcus faecalis OG1RF]
gi|430356183|ref|ZP_19424812.1| S1 domain RNA-binding protein [Enterococcus faecalis OG1X]
gi|430366606|ref|ZP_19427566.1| S1 domain RNA-binding protein [Enterococcus faecalis M7]
gi|327534936|gb|AEA93770.1| YhgF like protein [Enterococcus faecalis OG1RF]
gi|429514369|gb|ELA03919.1| S1 domain RNA-binding protein [Enterococcus faecalis OG1X]
gi|429516933|gb|ELA06404.1| S1 domain RNA-binding protein [Enterococcus faecalis M7]
Length = 730
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 313/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENVDI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|372222678|ref|ZP_09501099.1| Tex-like protein [Mesoflavibacter zeaxanthinifaciens S86]
Length = 708
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 153/685 (22%), Positives = 266/685 (38%), Gaps = 154/685 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE N D+ + +K+ + A L+KR
Sbjct: 31 VPFIARYRKERT--------------GNLDELQIGEIVKFKEAFEA----------LEKR 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KS + K EE+ AL +L + I ++++ E D+ L F
Sbjct: 67 KSTIL----KAIEEQD---------ALTPELKNKIEQTVDTTVLE----DIYLPF----- 104
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+ R TK K GL +A K + L+ + K +
Sbjct: 105 ------------KKSRKTKAEKARKNGLEPLA-KIIMTQRTTDLEFTAGKYAN-----AN 146
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTP 314
P+E A+ L+GARH+ A I+ +R +R+ A + T T
Sbjct: 147 VPDEAAA-------------LEGARHIIAEWINERTDIRNQIRTQLEKYAQLETKVIGTK 193
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPED-SLNKLFS 373
D + + W + L + + L I +AE E ++V I + +D +L+ +
Sbjct: 194 KDDEKAQKYQDY--FDW--NESLSRCPSHRLLAILRAESEGFIRVKISIDDDRALDSI-- 247
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
D K V KS DQ + ++DA LLPS+ E +A + + K
Sbjct: 248 DRK-------VIKSNNACADQIAMAVEDAYKRLLLPSLSNEILKQAKEKADEAAIAVFTK 300
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L + P K R+LA PG + V LD++G +
Sbjct: 301 NLRQLLLAPPLGEK------------RILAI--DPGFRTGCKLVCLDANGNL-------- 338
Query: 493 LTLRSQNVRDQQSKKNDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
L ++ + +K +E ++ + ++ + +G S +
Sbjct: 339 --LHNETIYPHPPQKQFREASKKIASLVDTYKIEAIAIGNGTAS-------------RET 383
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
E ++ + D L + E+ +Y S+I+ D+ P V+ AV++GR L +PLA
Sbjct: 384 ENLVKNTPFKRD-LEVFVVSEAGASIYSASKIARDEFPNYDVTVRGAVSIGRRLADPLAE 442
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
+ + S + ++ + + ++ V+ N VG+++N A + L
Sbjct: 443 LVKIDAK-----SIGVGQYQHDVDQTKLKTALDTVVESCVNSVGVNVNTASE-----SLL 492
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
++SG+GP+ A ++ GA +R+ LG K F A GFLR+R +
Sbjct: 493 SYVSGIGPKLAENIVNYRAENGAFTSREAIKKVPRLGGKAFEQAAGFLRIRDAENP---- 548
Query: 730 QFIDLLDDTRIHPESYGLAQELAKE 754
LDD+ +HPESYG+ + +AK+
Sbjct: 549 -----LDDSAVHPESYGIVKLMAKD 568
>gi|373470097|ref|ZP_09561242.1| Tex-like protein [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763065|gb|EHO51564.1| Tex-like protein [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 717
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 142/618 (22%), Positives = 260/618 (42%), Gaps = 111/618 (17%)
Query: 150 EESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYK- 208
+E R +DE RL + L + ++ L A E + ++ D +LK + V VD+ Y+
Sbjct: 48 DEILRQFDE-RLKYLRNLEEKKTQVLSAIEEQGKLTD-ELKKEIEDAITLVAVDD-LYRP 104
Query: 209 -RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC 267
RPKR T+ + GL A+ + LEK D + ++ S+ +
Sbjct: 105 FRPKRRTRAMIAVEKGLEGFANDI--------FEEKLEK------DATDEAKKYLSDKEG 150
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPTPDGDSAIDSFHQF 326
+ + GA + A +IS + R +R + F + S +S ++++ F
Sbjct: 151 LEVETEADAIAGAMDIIAEKISDDAGFRNKIRDLSFKQGILTSVAKDETTESVYENYYNF 210
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC--KEHYLSDGV 384
A + + K + L I + EEEK+L V + P + + + C K+H
Sbjct: 211 A-------ESVSKTAGYKILAINRGEEEKILTVKLDPPVEEIIRYLEKCIIKKH------ 257
Query: 385 SKSAQLWNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVS 440
N E ILKD +D+ + PS+ ++ RS ++ A+ + +GK L +
Sbjct: 258 -------NVHTEQILKDTIDDAYKRLIAPSIERDIRSSLTEAAEDEAIKVFGKNLTQLLM 310
Query: 441 VGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQN 499
P A RV+ W P + ++D +G+V+D T QN
Sbjct: 311 QPP-------------VAGRVV-LGWDPAFRTGCKLAVVDETGKVLDT--TVIYPTAPQN 354
Query: 500 VRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYE-----IIFKMVEEHPR 554
+ + +KK +E + K+ N+S SL + +I ++++E
Sbjct: 355 -KVEAAKKVLKELIKKY--------------NISLISLGNGTASRESEAVIVELIKEVN- 398
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
+L + +E+ +Y S++++++ P + A ++ R L++PLA + +
Sbjct: 399 ------SKLEYIIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLEDPLAELVKI- 451
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFIS 673
P S + ++ + + + V+ D N+VG+D+N A APL ++IS
Sbjct: 452 DPK----SIGVGQYQHDMNQKKLSEALGAVVEDCVNKVGVDLNTA------SAPLLEYIS 501
Query: 674 GLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
G+ A ++ G+ TRK+ + LG K F GFLR+ +
Sbjct: 502 GISKVVAKNIVVYREENGSFKTRKELLKVSKLGPKAFEQCAGFLRINDGKEP-------- 553
Query: 734 LLDDTRIHPESYGLAQEL 751
LD T +HPESY ++L
Sbjct: 554 -LDMTSVHPESYAATKKL 570
>gi|255972979|ref|ZP_05423565.1| S1 RNA-binding domain-containing protein [Enterococcus faecalis T1]
gi|255963997|gb|EET96473.1| S1 RNA-binding domain-containing protein [Enterococcus faecalis T1]
Length = 730
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 V-------------TTAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|228931747|ref|ZP_04094648.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228827927|gb|EEM73660.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 722
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 208/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + G E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMYYGY----EEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIRDNDSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|15896097|ref|NP_349446.1| transcription accessory protein [Clostridium acetobutylicum ATCC
824]
gi|337738051|ref|YP_004637498.1| transcription accessory protein [Clostridium acetobutylicum DSM
1731]
gi|15025886|gb|AAK80786.1|AE007781_9 Transcription accessory protein TEX, RNA-binding protein containing
S1 domain [Clostridium acetobutylicum ATCC 824]
gi|336291448|gb|AEI32582.1| transcription accessory protein [Clostridium acetobutylicum DSM
1731]
Length = 718
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 153/701 (21%), Positives = 287/701 (40%), Gaps = 145/701 (20%)
Query: 49 SPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDF 108
S + L I+ + + +++L + +PFIA YRKE L D+ E+N
Sbjct: 5 STRLAEKLKINVNQVKNVIEMLD-EGATVPFIARYRKERTGGL-SDVTLRELNES----- 57
Query: 109 ERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF 168
L + +LD ++++ ++S EE+ + L
Sbjct: 58 -----------LIYLRNLD------DRKETVIKSI-----EEQGK-------------LT 82
Query: 169 DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVA 228
D + + + AET EV+D L+ P YK PK+ T+ + + GL +A
Sbjct: 83 DELKEKVLKAETMTEVED------LYRP----------YK-PKKRTRATIALEKGLKSLA 125
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAV 286
E LG + GD E AS+F + N+ + L+GA + +
Sbjct: 126 D------EILGGKFK----GD--------INEFASSFINEEKGVNTIEEALKGAEDIISE 167
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWL 346
IS RK++R N V+ T + + + + ++ F ++ + K + L
Sbjct: 168 VISDNAEFRKWIRKYTYKNGVLETQGSSEEPTPYEMYYDF-------KEAVSKIPPHRVL 220
Query: 347 LIQKAEEEKLLQVTIKLP-EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN 405
I + E+EK+L V I E +N L +C ++ + E +KD+L
Sbjct: 221 AINRGEKEKILSVKIATDDEKIINYLVLNC---------LTGNEITDKYIEESVKDSLKR 271
Query: 406 FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACC 465
+ PS+ +E R+ ++ + ++ + + L + P + K
Sbjct: 272 LIYPSIEREIRAELTEKGENSAIEIFKANLKALLMQPPIKGK--------------AVLG 317
Query: 466 WGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHV 524
+ PG + +LD +G+++D T Q + + L + + H V
Sbjct: 318 YDPGFRTGCKIAVLDDTGKLLD-------TATVYATAPQNDVEGSIKTLKELIYKHNVGV 370
Query: 525 VVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSD 584
V LG S S E+I ++++E + G ++ V E+ +Y S +++
Sbjct: 371 VSLGNGTASRES-----EEVIARLLKEIKEEKGIDV---YYVIVSEAGASVYSASELAAK 422
Query: 585 QLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQV 644
+ P +++ A+++GR LQ+PL+ + + P S + ++ + P + ++ V
Sbjct: 423 EYPDINVSLRGAISIGRRLQDPLSELVKI-DPK----SIGVGQYQHDVAPKKMDESLKGV 477
Query: 645 MVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG 704
+ D N VG+D+N+A + L ++SG+ A ++ GA RK+ +
Sbjct: 478 VEDCVNNVGVDLNIATP-----SLLSYVSGINANIAKNIVDYREENGAFKNRKELLKVKR 532
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
LG K F GFLR+ + +LD+T +HPESY
Sbjct: 533 LGPKAFEQCAGFLRIMDGDE---------VLDNTSVHPESY 564
>gi|49484289|ref|YP_041513.1| RNA binding protein [Staphylococcus aureus subsp. aureus MRSA252]
gi|257428860|ref|ZP_05605254.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257431470|ref|ZP_05607843.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus 68-397]
gi|257434180|ref|ZP_05610530.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus E1410]
gi|282904729|ref|ZP_06312603.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
C160]
gi|282906408|ref|ZP_06314259.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282909376|ref|ZP_06317191.1| S1 domain RNA-binding protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282920239|ref|ZP_06327963.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus C427]
gi|282925451|ref|ZP_06333105.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus C101]
gi|283958842|ref|ZP_06376287.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293508982|ref|ZP_06667769.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus 58-424]
gi|293547494|ref|ZP_06672169.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
M1015]
gi|295428650|ref|ZP_06821276.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|297589873|ref|ZP_06948513.1| YhgF like protein [Staphylococcus aureus subsp. aureus MN8]
gi|384867018|ref|YP_005747214.1| YhgF like protein [Staphylococcus aureus subsp. aureus TCH60]
gi|415684883|ref|ZP_11449912.1| putative RNA binding protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|417887141|ref|ZP_12531277.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21195]
gi|418565155|ref|ZP_13129570.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21264]
gi|418582882|ref|ZP_13146955.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418595155|ref|ZP_13158780.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21342]
gi|418600965|ref|ZP_13164414.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21345]
gi|418892577|ref|ZP_13446688.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418898650|ref|ZP_13452717.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418901451|ref|ZP_13455502.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418909889|ref|ZP_13463879.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG149]
gi|418918108|ref|ZP_13472062.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418923777|ref|ZP_13477689.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418986630|ref|ZP_13534311.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|49242418|emb|CAG41132.1| putative RNA binding protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257274202|gb|EEV05719.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257277711|gb|EEV08381.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus 68-397]
gi|257280819|gb|EEV10964.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus E1410]
gi|282312852|gb|EFB43253.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus C101]
gi|282316099|gb|EFB46480.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus C427]
gi|282326646|gb|EFB56944.1| S1 domain RNA-binding protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330358|gb|EFB59876.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282594762|gb|EFB99739.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
C160]
gi|283789560|gb|EFC28383.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919614|gb|EFD96687.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
M1015]
gi|291094686|gb|EFE24958.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus 58-424]
gi|295127320|gb|EFG56960.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|297577001|gb|EFH95715.1| YhgF like protein [Staphylococcus aureus subsp. aureus MN8]
gi|312437523|gb|ADQ76594.1| YhgF like protein [Staphylococcus aureus subsp. aureus TCH60]
gi|315193222|gb|EFU23620.1| putative RNA binding protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|341858413|gb|EGS99206.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21195]
gi|371974779|gb|EHO92095.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21264]
gi|374400382|gb|EHQ71497.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21345]
gi|374402288|gb|EHQ73320.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21342]
gi|377700687|gb|EHT25021.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377702745|gb|EHT27064.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377709116|gb|EHT33387.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377729717|gb|EHT53803.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377732956|gb|EHT57005.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377748951|gb|EHT72905.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377749852|gb|EHT73791.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG149]
gi|377758209|gb|EHT82095.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 716
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 145/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVENAIRGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + ++ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTAVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VAKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIHSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|417905546|ref|ZP_12549354.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21269]
gi|341843009|gb|EGS84241.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21269]
Length = 716
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|418560705|ref|ZP_13125214.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21252]
gi|418994764|ref|ZP_13542397.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG290]
gi|371971127|gb|EHO88534.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21252]
gi|377741697|gb|EHT65683.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG290]
Length = 716
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTASVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPNFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|384550861|ref|YP_005740113.1| transcription accessory protein (S1 RNA binding) [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302333710|gb|ADL23903.1| transcription accessory protein (S1 RNA binding) [Staphylococcus
aureus subsp. aureus JKD6159]
Length = 716
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VTKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYKLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|417898348|ref|ZP_12542269.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21259]
gi|341848708|gb|EGS89868.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21259]
Length = 655
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 147/668 (22%), Positives = 273/668 (40%), Gaps = 105/668 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 78 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 137
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 138 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 191
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 192 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 245
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 246 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 289
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + +++++ V
Sbjct: 290 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKYALPV-- 338
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 339 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 393
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 394 GVGQYQHDVNQKALENALT---------FVVETAVNQVGVDVNTA-----SSSLLQYVSG 439
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 440 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 490
Query: 735 LDDTRIHPESYGLAQELAKEV--YNRDIEGD-LNDDEDAL---EMAIEHVRDRPDLLKTY 788
LD+T IHPESY + +L ++ D+ D L D ++L E+AIE P
Sbjct: 491 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKDKLNSLDMDELAIELQVGVPT----- 545
Query: 789 LLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGR 848
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 546 -LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEGM 583
Query: 849 VVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
+ TVR V A + G++ S + + + D + GDI+ I SI KN
Sbjct: 584 KLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDKN 642
Query: 909 RYQVFLVC 916
+ +V L
Sbjct: 643 KDKVSLTM 650
>gi|418983010|ref|ZP_13530714.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377702637|gb|EHT26957.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1242]
Length = 716
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 145/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVENAIRGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + ++ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTAVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VAKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIHSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|384870614|ref|YP_005753328.1| S1 RNA binding domain-containing protein [Staphylococcus aureus
subsp. aureus T0131]
gi|424786053|ref|ZP_18212846.1| Transcription accessory protein (S1 RNA-binding domain)
[Staphylococcus aureus CN79]
gi|329314749|gb|AEB89162.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
T0131]
gi|421955579|gb|EKU07915.1| Transcription accessory protein (S1 RNA-binding domain)
[Staphylococcus aureus CN79]
Length = 716
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKFGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|418926477|ref|ZP_13480373.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377741328|gb|EHT65317.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG2018]
Length = 716
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKYNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|169825145|ref|YP_001692756.1| transcription accessory protein [Finegoldia magna ATCC 29328]
gi|167831950|dbj|BAG08866.1| transcription accessory protein [Finegoldia magna ATCC 29328]
Length = 697
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 194/880 (22%), Positives = 341/880 (38%), Gaps = 218/880 (24%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +L I D++++ ++LL + IPFIA YRKE +L
Sbjct: 6 KLSEELDIKYDNVVKTVELLD-EGNTIPFIARYRKEITGNL------------------- 45
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQ-QLFD 169
+ L ++D LQ+RK D TRL Q +L +
Sbjct: 46 -----TDETLRQLNDRLTYLRNLQERKD------------------DITRLIDEQGKLTE 82
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
+ K ++ A E++D+ L F +PK+ T+ S + GL VA
Sbjct: 83 DLKKQIDEAAILTELEDIYLPF-----------------KPKKRTRGSIAVELGLQPVAD 125
Query: 230 KFGYSSEQLGLQLSLEKMGDEL---EDPKETPEEMASNFKC-AMFNSSQAVLQGARHMAA 285
+ L +EK E E+ K + +A + A F S Q V
Sbjct: 126 MIMEKTHSLA---EIEKKASEFVNGEEIKTVDDAVAKSLDIIAEFVSEQKVF-------- 174
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAI-DSFHQFAGVKWLREKPLRKFEDAQ 344
R VR+ F+ A++ T + +S ++ F+ + ++ + +
Sbjct: 175 ---------RDIVRNSFVTEAILKTEEKNEDESGTYKMYYDFS-------EKVKDIKAHR 218
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
L I + E+E L+V+ L +D +F + K+ D E +KD+
Sbjct: 219 ILAIFRGEKEGFLKVSFVLNDDY--NIF-----KIMRKIARKNDFETYDLIEKAVKDSYK 271
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
++PS+ E R M K + + S+G ++ +++ P
Sbjct: 272 RLIVPSIETEVRQSM-------------KEMADDESIGVFK---SNLKP----------Y 305
Query: 465 CWGPGKPETTFVMLD---SSGEVVDVL-----FTGCLTLRSQNVRDQQSKKNDQERLLKF 516
P ET + LD +G V V+ F + + R Q + + E L +F
Sbjct: 306 LMQPPIKETAIIGLDPGFRTGCKVAVISEYGDFLDSAVIYVTDARKQIQRAD--ETLKEF 363
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG--DESLPR 574
+ + ++ +G S + E++ D+ ++DE I Y +E+
Sbjct: 364 IKKYNVKLIAIGNGTAS-------------RETEKYVSDLLAQIDE-EIFYAIVNEAGAS 409
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
+Y S+++ ++ P ++ A+++ R +Q+PLA + + S + ++ +
Sbjct: 410 IYSASKLAIEEFPDLDVTIRGAISIARRIQDPLAELVKISPQ-----SIGVGQYQHDVNQ 464
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+ +E+V+ D N VG++IN A A L ++SG+ A ++ + G
Sbjct: 465 KKLKSSLEEVVEDCVNTVGVNINTA-----SSALLNYVSGITKTTAKNIVDYKIENGPFT 519
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
R++ + G+G K FV GFLR+ S + +LD+T +HPESY +A+++ K
Sbjct: 520 NRQEILKVKGIGPKAFVQCAGFLRIPESEE---------ILDNTEVHPESYEIAKQIMK- 569
Query: 755 VYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELI 814
DLND +D ++ E TL I EL
Sbjct: 570 -------YDLND-----------------------IDVKKLSEELEVGEPTLRDIIEELK 599
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA---ICVLESGLA 871
+D R++ +P ++ I D L EG +V TVR V A I + E GL
Sbjct: 600 KPGRDPRDEMPKPVLRQDVLSI-----DDLEEGMIVTGTVRNVVDFGAFIDIGIKEDGLC 654
Query: 872 GM-LMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNR 909
+ M Y + R+ E+SD + KI I K R
Sbjct: 655 HISKMSNSYIKNPREVCEVSDTVK------VKIIGIDKER 688
>gi|418645507|ref|ZP_13207629.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-55]
gi|421150971|ref|ZP_15610622.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus str. Newbould 305]
gi|443640162|ref|ZP_21124157.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21196]
gi|375023026|gb|EHS16492.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-55]
gi|394329055|gb|EJE55182.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus str. Newbould 305]
gi|443405720|gb|ELS64315.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21196]
Length = 716
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIITYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|448742162|ref|ZP_21724114.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
KT/314250]
gi|445547033|gb|ELY15307.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
KT/314250]
Length = 712
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 135 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 194
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 195 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 248
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 249 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 302
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 303 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 346
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 347 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 395
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 396 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 450
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 451 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 496
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 497 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 547
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 548 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 602
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 603 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEG 639
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 640 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 698
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 699 NKDKVSLTM 707
>gi|418568210|ref|ZP_13132560.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21272]
gi|418887090|ref|ZP_13441234.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1150]
gi|371980333|gb|EHO97546.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21272]
gi|377723923|gb|EHT48043.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1150]
Length = 716
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 209/497 (42%), Gaps = 71/497 (14%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + +V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQSVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL 751
LD+T IHPESY + +L
Sbjct: 552 LDNTSIHPESYKVTYQL 568
>gi|384548289|ref|YP_005737542.1| hypothetical protein SAOV_2105c [Staphylococcus aureus subsp.
aureus ED133]
gi|387781043|ref|YP_005755841.1| putative RNA binding protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|416841711|ref|ZP_11904566.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
O11]
gi|416847121|ref|ZP_11906930.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
O46]
gi|417897486|ref|ZP_12541417.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21235]
gi|298695338|gb|ADI98560.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
gi|323439221|gb|EGA96948.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
O11]
gi|323442401|gb|EGB00030.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
O46]
gi|341839584|gb|EGS81164.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21235]
gi|344178145|emb|CCC88631.1| putative RNA binding protein [Staphylococcus aureus subsp. aureus
LGA251]
Length = 716
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|289423347|ref|ZP_06425155.1| protein YhgF [Peptostreptococcus anaerobius 653-L]
gi|429728438|ref|ZP_19263161.1| Tex-like protein [Peptostreptococcus anaerobius VPI 4330]
gi|289156278|gb|EFD04935.1| protein YhgF [Peptostreptococcus anaerobius 653-L]
gi|429149667|gb|EKX92638.1| Tex-like protein [Peptostreptococcus anaerobius VPI 4330]
Length = 716
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 142/696 (20%), Positives = 297/696 (42%), Gaps = 151/696 (21%)
Query: 55 DLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTL 114
+L + ++ ++ +DL+ Q IPFIA YRK+ + D++ ++N
Sbjct: 10 ELGLRKNQVVSAIDLID-QGNTIPFIARYRKD-VTGEMTDIQLRDLN------------- 54
Query: 115 KWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS 174
H++ + + +LD + +E+ +R+ +E +L + I KS
Sbjct: 55 --HRLEY-LRNLDAR-------------------KEDIKRLIEE-----QGKLTEDIEKS 87
Query: 175 LEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYS 234
LE A T +E +D+ + P YK+ KR T+ + + GL +A+ S
Sbjct: 88 LEKAMTLQEAEDI-------YAP---------YKQKKR-TRATVARERGLENLANMILLS 130
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
++LEK + ++ E++ + + GA+ + A +S + +
Sbjct: 131 K-----NINLEKEAQAFVNKEKDVEDIDT------------AIAGAKDIIAEIMSDDAQI 173
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
RK +R + ++ + + DS ++ ++ +P+R + L I + E+E
Sbjct: 174 RKMIREEALKRGLLISKAKGEEDSVYRIYYDYS-------EPVRDVLPHRILAINRGEKE 226
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELIL----KDALDNFLLPS 410
L V + L ++++ K YLS L N+ + I+ +DA + PS
Sbjct: 227 GFLSVKVSLDDENM---IERVKSAYLS--------LQNEGNDGIILEIAQDAYKRLIFPS 275
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK 470
+ +E R+ ++ + + +GK L N + + P P ++ + + G
Sbjct: 276 IEREIRNHLTDIGQERAIQVFGKNL-NGLLLQP---------PIKDVSVMGFDPAYRTG- 324
Query: 471 PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD-HQPHVVVLGA 529
++D +G++VD +T + N K + ++ LK M+D H+ ++ +G
Sbjct: 325 --CKIAVVDKNGKLVD--YTTIYPTKPHN------KVEEAKKTLKKMIDKHKVDIISIGN 374
Query: 530 VNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQ 589
S + +++ + M++E R V + V +E+ +Y S +++++ P
Sbjct: 375 ---GTASRESEMF--VSDMLKEINRPVSY-------VIVNEAGASVYSASELANEEHPDI 422
Query: 590 KGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+++ A+++ R LQ+P+A + + + ++ E L +++ V+ D
Sbjct: 423 NVSIRGAISIARRLQDPMAELVKIDPKSIGVGQYQHDVNEKRLNE-----VLDGVVEDSV 477
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N++G+D+N A ++ L+ +SG+ A ++ G R+D LG
Sbjct: 478 NKIGVDLNSA-----SYSLLEHVSGISKSIAKNIVAYRDENGEFENREDLKKVKRLGPAA 532
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
F A GF+R+ + LD+T +HPESY
Sbjct: 533 FKQAAGFIRITNAKNP---------LDNTGVHPESY 559
>gi|21283716|ref|NP_646804.1| hypothetical protein MW1987 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486857|ref|YP_044078.1| RNA binding protein [Staphylococcus aureus subsp. aureus MSSA476]
gi|297210117|ref|ZP_06926510.1| YhgF like protein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300910480|ref|ZP_07127932.1| YhgF like protein [Staphylococcus aureus subsp. aureus TCH70]
gi|418599059|ref|ZP_13162555.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21343]
gi|418935045|ref|ZP_13488862.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418989131|ref|ZP_13536799.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|21205158|dbj|BAB95852.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49245300|emb|CAG43775.1| putative RNA binding protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296885317|gb|EFH24257.1| YhgF like protein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300888322|gb|EFK83513.1| YhgF like protein [Staphylococcus aureus subsp. aureus TCH70]
gi|374398109|gb|EHQ69299.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21343]
gi|377715659|gb|EHT39846.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377769278|gb|EHT93052.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC128]
Length = 716
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|340356589|ref|ZP_08679231.1| S1 RNA binding domain protein [Sporosarcina newyorkensis 2681]
gi|339620516|gb|EGQ25085.1| S1 RNA binding domain protein [Sporosarcina newyorkensis 2681]
Length = 713
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 146/690 (21%), Positives = 287/690 (41%), Gaps = 107/690 (15%)
Query: 238 LGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAV------LQGARHMAAVEISCE 291
+ ++ LE + DE+ + E ++ N+ + V L+GA+ + A +S +
Sbjct: 111 IAIESGLEPLADEMMQQTNSSIEKSA---AVYVNTEKEVHTIEDALEGAKFIIAERVSED 167
Query: 292 PCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKA 351
+R+ +R ++ + F + + E+PL K + L I +
Sbjct: 168 ATMRERIRKTTWSAGRLTAALKKGAEDERKVFENY----YDYEEPLNKIVPHRVLAINRG 223
Query: 352 EEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSM 411
E+E +L+V + P D ++ D + YL S SA + L+D+ + PS+
Sbjct: 224 EKEDVLRVGVGFPAD---RIVGDLERAYLKQTGSPSASYIKNA----LEDSFKRLIAPSI 276
Query: 412 VKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKP 471
+E R+ ++ +A++ + + + L + + P + R + +
Sbjct: 277 EREVRTALTEKAEAQAIHVFSENLRSLLLQAPLK-------------GRTVLGVDPAFRT 323
Query: 472 ETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN 531
++D +G++ D+ + + + SKK + L K+ + ++ +G
Sbjct: 324 GCKLAVVDETGKLHDI---SVIYPHPPKPQKEASKKVIMDLLKKYPIS----IIAIGNGT 376
Query: 532 LSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKG 591
S + K I ++++E V + V +E+ +Y S + ++ P +
Sbjct: 377 ASRETEK-----FIVELIKEAEEPVSY-------VIVNEAGASVYSASPQAREEFPDLQV 424
Query: 592 NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQ 651
+ AV++ R LQ+PL+ + + + ++ + L+ + V+ NQ
Sbjct: 425 EQRSAVSIARRLQDPLSELVKIDPESIGVGQYQHDVAKKNLSESLSF-----VVETAVNQ 479
Query: 652 VGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFV 711
VG+++N A + LQ++SGL A ++ ++ AG R D LG K +
Sbjct: 480 VGVNVNTA-----SSSLLQYVSGLSKTVAENIVKAREEAGKFKKRTDLKKIPRLGSKTYE 534
Query: 712 NAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDAL 771
A+GFLR+ S + D T IHPESY +A+ + KEV + ++ +AL
Sbjct: 535 QAIGFLRIPESKEP---------FDTTGIHPESYKIAESVLKEVALDKTQLGTSEATEAL 585
Query: 772 -EMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
++ I + + ++ + L D I+ +R N+ D R+ Y +P
Sbjct: 586 GKVDIAQLARQLEVGEITLKD-IIETMQRPNR----------------DPRDDYPQP--- 625
Query: 831 EEFYMISGETEDT--LAEGRVVQATVRRVQGQRA---ICVLESGLAGM-LMKEDYSDDWR 884
++ + D L EG +Q TVR V A I V E GL + MK+ +
Sbjct: 626 ----LLKADVLDIKDLHEGMEMQGTVRNVVDFGAFVDIGVSEDGLVHISKMKKGFVKHPL 681
Query: 885 DSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
D S GDI+T I S+ + + ++ L
Sbjct: 682 DVVAS-----GDIVTVWIDSVDRQKGRIAL 706
>gi|322434828|ref|YP_004217040.1| Tex-like protein [Granulicella tundricola MP5ACTX9]
gi|321162555|gb|ADW68260.1| Tex-like protein protein [Granulicella tundricola MP5ACTX9]
Length = 765
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 141/615 (22%), Positives = 246/615 (40%), Gaps = 118/615 (19%)
Query: 152 SRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPK 211
SRR + +A +L D + +E + E++D+ L + RPK
Sbjct: 73 SRRETVLSSIAEQGKLTDELKAKIEGTLDKGELEDLYLPY-----------------RPK 115
Query: 212 RSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFN 271
R TK + + GL +A Y Q LSL + D +
Sbjct: 116 RRTKATIAKEKGLEPLAD---YVWGQAAGALSLMDLAGSFID------------EAKGVA 160
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKW 331
S L+GARH+ A I+ +RK +R++ D V+ + D A+D+ +F
Sbjct: 161 SIVEALEGARHIVAERIAETAELRKALRTLLHDEGVIVSRKAMD---AVDAQEKFKMYYE 217
Query: 332 LREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLW 391
RE P++ + L I++ E E +L I++ D+ K+ DG W
Sbjct: 218 YRE-PVKTIPSHRMLAIRRGEAENVLYFLIEM--DAARATGIMRKQVLGPDGD------W 268
Query: 392 NDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDI 451
Q EL ++D+ L S+ E R + R+ + + + L N + P
Sbjct: 269 TAQLELAIEDSWSRLLSSSIQGELRLELKKRSDVDAIQVFRENLGNLLMGAP-------- 320
Query: 452 TPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLF--TGCLTLRSQNVRDQQSK 506
A P + PG + ++D +G+ + DV++ TG Q+
Sbjct: 321 -----AGP-IAVLGLDPGLRTGCKVAVVDETGKFLAHDVIYPHTG------------QTA 362
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHE--MDELS 564
K++Q + + H + +G S + D + RD E + E+
Sbjct: 363 KSNQV-MAGLVKAHNVRAIAIGN---GTASRETDAF----------VRDFLAEQGLTEIF 408
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREI 620
V ES +Y S ++ + P V+ A+++ R LQ+PL+ + + G G+
Sbjct: 409 KVMVSESGASVYSASDVARQEFPELDLTVRGAISIARRLQDPLSELVKVDPKAIGVGQ-- 466
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
++ + + +E + N+VG+D+N + W L++++G+ R A
Sbjct: 467 -------YQHDVDQRQLQQSLEATIESCVNKVGVDLNTS---SWTL--LRYVAGITERTA 514
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ + G +R G+G K F A GFLR+R Q LD T +
Sbjct: 515 LNIVQFRDENGRFNSRAQLKKVPGVGAKTFEQAAGFLRIRGGVQP---------LDSTSV 565
Query: 741 HPESYGLAQELAKEV 755
HPESY L +++AKEV
Sbjct: 566 HPESYALVEQIAKEV 580
>gi|57650735|ref|YP_186869.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus COL]
gi|87160760|ref|YP_494667.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|88195963|ref|YP_500775.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|151222181|ref|YP_001333003.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus str. Newman]
gi|161510275|ref|YP_001575934.1| RNA-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|258453226|ref|ZP_05701217.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
A5948]
gi|262049234|ref|ZP_06022109.1| hypothetical protein SAD30_0445 [Staphylococcus aureus D30]
gi|262052480|ref|ZP_06024678.1| hypothetical protein SA930_0056 [Staphylococcus aureus 930918-3]
gi|282923052|ref|ZP_06330737.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
A9765]
gi|284025099|ref|ZP_06379497.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus 132]
gi|294850548|ref|ZP_06791275.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
A9754]
gi|304379244|ref|ZP_07361983.1| YhgF like protein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|384862716|ref|YP_005745436.1| transcription accessory protein (S1 RNA binding) [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|385782304|ref|YP_005758475.1| S1 RNA binding domain-containing protein [Staphylococcus aureus
subsp. aureus 11819-97]
gi|387143780|ref|YP_005732174.1| putative RNA binding protein [Staphylococcus aureus subsp. aureus
TW20]
gi|415688419|ref|ZP_11452134.1| S1 domain RNA-binding protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|417650374|ref|ZP_12300146.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21189]
gi|418277241|ref|ZP_12891855.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21178]
gi|418286712|ref|ZP_12899353.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21209]
gi|418319256|ref|ZP_12930640.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21232]
gi|418571321|ref|ZP_13135557.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21283]
gi|418572717|ref|ZP_13136923.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21333]
gi|418579987|ref|ZP_13144077.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418641097|ref|ZP_13203311.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-24]
gi|418648030|ref|ZP_13210082.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-88]
gi|418649184|ref|ZP_13211214.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-91]
gi|418658687|ref|ZP_13220400.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-111]
gi|418904404|ref|ZP_13458441.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418906996|ref|ZP_13461017.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418912614|ref|ZP_13466591.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|418929408|ref|ZP_13483292.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418952845|ref|ZP_13504857.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-189]
gi|419774761|ref|ZP_14300718.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus CO-23]
gi|422743029|ref|ZP_16797025.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422745991|ref|ZP_16799926.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|440708184|ref|ZP_20888856.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21282]
gi|440735425|ref|ZP_20915031.1| YhgF like protein [Staphylococcus aureus subsp. aureus DSM 20231]
gi|57284921|gb|AAW37015.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
COL]
gi|87126734|gb|ABD21248.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203521|gb|ABD31331.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150374981|dbj|BAF68241.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160369084|gb|ABX30055.1| S1 domain RNA-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257859172|gb|EEV82029.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
A5948]
gi|259159601|gb|EEW44647.1| hypothetical protein SA930_0056 [Staphylococcus aureus 930918-3]
gi|259162599|gb|EEW47166.1| hypothetical protein SAD30_0445 [Staphylococcus aureus D30]
gi|269941664|emb|CBI50071.1| putative RNA binding protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282593243|gb|EFB98240.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
A9765]
gi|294822568|gb|EFG39010.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
A9754]
gi|302751945|gb|ADL66122.1| transcription accessory protein (S1 RNA binding) [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|304342103|gb|EFM08003.1| YhgF like protein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|315197005|gb|EFU27347.1| S1 domain RNA-binding protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140766|gb|EFW32618.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143741|gb|EFW35518.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329724027|gb|EGG60551.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21189]
gi|364523293|gb|AEW66043.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|365165925|gb|EHM57673.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21209]
gi|365173719|gb|EHM64205.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21178]
gi|365240993|gb|EHM81750.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21232]
gi|371980489|gb|EHO97695.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21283]
gi|371984061|gb|EHP01188.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21333]
gi|375019860|gb|EHS13410.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-24]
gi|375027612|gb|EHS20972.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-88]
gi|375030443|gb|EHS23760.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-91]
gi|375037818|gb|EHS30826.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-111]
gi|375376111|gb|EHS79661.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-189]
gi|377693326|gb|EHT17698.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377721121|gb|EHT45262.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|377736600|gb|EHT60615.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377739840|gb|EHT63840.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377761452|gb|EHT85323.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|383971429|gb|EID87504.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus CO-23]
gi|436430636|gb|ELP27995.1| YhgF like protein [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505213|gb|ELP41148.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21282]
Length = 716
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|431799291|ref|YP_007226195.1| transcriptional accessory protein [Echinicola vietnamensis DSM
17526]
gi|430790056|gb|AGA80185.1| transcriptional accessory protein [Echinicola vietnamensis DSM
17526]
Length = 750
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 152/718 (21%), Positives = 282/718 (39%), Gaps = 167/718 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +L+I + + ++LL + +PFI+ YRKE SL +EV
Sbjct: 8 KIAEELNIRQKQVSDTIELLD-EGATVPFISRYRKEVTGSL------DEVQ--------- 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI D ++ L KR+ A+ K++ ++L
Sbjct: 52 ---------VAAIRDRVQQLRDLDKRREAILKSIKEQ-----------------EKLTPE 85
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ + AET ++D+ L + +PKR TK + + GL +A K
Sbjct: 86 LEGKINDAETMAALEDLYLPY-----------------KPKRRTKATIAREKGLEPLAEK 128
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+ E L+ E+ +++ KE S++ LQGAR + A ++
Sbjct: 129 I-FGQESCDLE---EEAKAYIDEEKEV-------------GSTEEALQGARDIIAEWVNE 171
Query: 291 EPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQK 350
+RK +R +F++ + P + + + +W +P++ + L +++
Sbjct: 172 NAELRKKMRDLFIEEGKFVSKVIPGKEEEAIKYKDY--FEW--SEPIKTAPSHRVLAMRR 227
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHY----LSDGVSKSAQ-LWNDQRELILKDALDN 405
E+E L + C E L + ++ +AQ ++Q +L +KD
Sbjct: 228 GEKELFL-------------MLDSCPEELDALALMEKMTVTAQNTSSEQVKLAIKDCYKR 274
Query: 406 FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD-NDITPDEEAAPRVLAC 464
+ PSM E R +A + + + L + P K I P ++
Sbjct: 275 LMKPSMETEVRLYTKKKADEDAIKVFAENLRQLLLGAPLGEKSVMAIDPGFRTGCKL--A 332
Query: 465 CWGPGKPETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD-HQ 521
C GP G+V+ D ++ + Q KK + L+K +++ HQ
Sbjct: 333 CLGP------------QGQVLHYDAIYPN----------EPQRKKAESAALVKHLVEKHQ 370
Query: 522 PHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRI 581
+ +G S + E+ + +G + L IV +ES +Y S +
Sbjct: 371 VEAIAIGNGTAS-------------RETEQFFKSIGLPQNVL-IVMVNESGASIYSASEV 416
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEK 637
+ ++ P ++ AV++GR L +PLA + + G G+ L+N L
Sbjct: 417 AREEFPDLDLTIRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQSALKNSL----- 471
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRK 697
+ ++ N VG+++N A + L ++SGLGP A ++ G +R+
Sbjct: 472 ----DDTVMSCVNGVGVEVNTASKQ-----LLTYVSGLGPALAQNIVNFRNENGPFKSRE 522
Query: 698 DFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
D LG K + A GFLR++ + LD + +HPE Y L Q++A ++
Sbjct: 523 DIRKVPRLGDKAYEQAAGFLRIQNAPNP---------LDRSAVHPERYDLVQQMATDL 571
>gi|393787630|ref|ZP_10375762.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides nordii CL02T12C05]
gi|392658865|gb|EIY52495.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides nordii CL02T12C05]
Length = 710
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 125/555 (22%), Positives = 228/555 (41%), Gaps = 100/555 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L + L L++ + D K A+ F
Sbjct: 106 KPKRKTRAETARQKGL-----------EPLAMVLMLQRENNL--DAK------AATFVKG 146
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ L+GAR + A +++ + R +R+ F A++S + + +
Sbjct: 147 DVKDVEDALKGARDIIAEQVNEDERARNAIRNQFNRQAIISAKVVKGKEEEAAKYRDY-- 204
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ +PL++ + L I++AE E LL+V+I P+D +C E V +
Sbjct: 205 --FDFSEPLKRCTSHRLLAIRRAEAEGLLKVSIT-PDDE------ECIERLERQFVRSNN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ E + +D+ L PS+ E ++ +A + + + L + P +K
Sbjct: 256 ECARQVAEAV-QDSYKRLLKPSIETEFAAMTKEKADEEAIRVFAENLRQLLLAPPLGQK- 313
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ---Q 504
RVL PG + V +D+ G + L ++N+
Sbjct: 314 -----------RVLG--IDPGFRTGCKVVCMDAQGNL----------LHNENIYPHPPVD 350
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
KK +L K + +Q + +G + T+ ++ + F ++ R L
Sbjct: 351 KKKEAAAKLRKMVEAYQIDAIAIG----NGTASRETEF---FVTTQQFDRP-------LQ 396
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREI 620
+ E +Y S+I+ D+ P V+ AV++GR L +PLA + + G G+
Sbjct: 397 VFVVSEQGASIYSASKIARDEFPEYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQ 456
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
L+ L +Q + + N VG+++N A L +ISGLGP+ A
Sbjct: 457 HDVDQTKLKKAL---------DQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQLA 502
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ GA +RK + +G K F GFLR+ Q + LD+T +
Sbjct: 503 QNIVNYRAENGAFDSRKALMKVPRMGAKAFEQCAGFLRI---------PQAKNPLDNTAV 553
Query: 741 HPESYGLAQELAKEV 755
HPESY + +++AK++
Sbjct: 554 HPESYCIVEQMAKDM 568
>gi|257085428|ref|ZP_05579789.1| RNA binding protein S1 [Enterococcus faecalis Fly1]
gi|256993458|gb|EEU80760.1| RNA binding protein S1 [Enterococcus faecalis Fly1]
Length = 730
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GD--SAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKQTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|401679310|ref|ZP_10811242.1| Tex-like protein N-terminal domain protein [Veillonella sp. ACP1]
gi|400219639|gb|EJO50502.1| Tex-like protein N-terminal domain protein [Veillonella sp. ACP1]
Length = 725
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 111/517 (21%), Positives = 218/517 (42%), Gaps = 70/517 (13%)
Query: 244 LEKMGDELEDPKET---PEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
LE + D + + T P ++A + + + +QGA + A +S R +R
Sbjct: 121 LEPLADMILNDTVTSGNPLDIAKEYVSEEVPTPEDAIQGASDIVAEIVSDSADFRATLRK 180
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVT 360
+ D + D F Q+ +P+R+ + L + + E+ L++
Sbjct: 181 RMWKEGFIQAELVEDNEHK-DQFLQYNEYA----EPVRQMPSHRILAVNRGEKLGALKLA 235
Query: 361 IKLPEDSLNKLFSDCKEHYLSDGVSKSAQ-LWNDQRELILKDALDNFLLPSMVKEARSLM 419
+ +P++S + Y+ G++KS Q +++D + + DA + P++ ++ R+ +
Sbjct: 236 LTVPDESYIQ--------YMVRGITKSEQSIFSDVKASAVADAYKRLMFPALERDIRNEL 287
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVML 478
+ A + +G L N + P A V+ PG + ++
Sbjct: 288 TESADEQAIKVFGVNLKNLLLQPPL-------------AGHVI-MGLDPGYRTGCKMAII 333
Query: 479 DSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
D+ G V+D G L + Q+++K E++ KF V L ++ S +
Sbjct: 334 DAQGNVLDY---GAYYLTNSEKLKQEAQKKLAEKIRKFK-------VTLLSIGNGTASYE 383
Query: 539 DDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVA 598
+ + KM+EE D + + +E+ +Y S+++ D+LP ++ AV+
Sbjct: 384 TE--QFASKMIEEEKLDCHY-------IITNEAGASVYSASKLAIDELPDLDVTIRGAVS 434
Query: 599 LGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINL 658
+ R +Q+PLA + + S + ++ + + ++QV+ V N VG+++N
Sbjct: 435 IARRVQDPLAESVKI-----DPKSIGVGQYQHDVNQKQLSHTLDQVVESVVNHVGVELNT 489
Query: 659 AIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLR 718
A A LQ I+G+ A ++ G +RK + LG F GFLR
Sbjct: 490 A-----SPAILQHIAGISSTVAKNIVAFRQDNGGFTSRKQLLKVPRLGPAAFTQCAGFLR 544
Query: 719 VRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ + LD+T +HPESY LA+ + E+
Sbjct: 545 LNGANNP---------LDNTSVHPESYELAERIIGEL 572
>gi|257066240|ref|YP_003152496.1| RNA binding S1 domain-containing protein [Anaerococcus prevotii DSM
20548]
gi|256798120|gb|ACV28775.1| RNA binding S1 domain protein [Anaerococcus prevotii DSM 20548]
Length = 699
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 125/534 (23%), Positives = 228/534 (42%), Gaps = 94/534 (17%)
Query: 235 SEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCV 294
+ + GL L+ + + E+ E +E AS + S + L A + A +IS
Sbjct: 115 AREFGLDKLLDFLFTKAENEGEALDE-ASKYLVEGLESEEEALDRALDILAEDISNSIPA 173
Query: 295 RKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEE 354
R +R A ++ D ++++ F+ K LR + Q L I + E+E
Sbjct: 174 RNIIRRDGFLRAKLTCSLKEDEAGLYENYYDFS-------KKLRDMKSFQTLAINRGEKE 226
Query: 355 KLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELIL----KDALDNFLLPS 410
K L V ++ ++ KL +D + + + +N +E +L DA +LPS
Sbjct: 227 KALTVKLEFTDEYNKKLIAD---------LFREDKDFNPYQESLLVKTVNDAYKRLMLPS 277
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY--QRKDNDITPDEEAAPRVLACCWGP 468
+ E R+ ++ A+ + +GK L PY QR P + A P
Sbjct: 278 ITTEMRNFLTESAEDESISVFGKNLK------PYLLQR------PIKGQA----VIGLDP 321
Query: 469 G-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
G + ++D G+ +D S + + K ++E + + + V L
Sbjct: 322 GFRTGCKVAVVDQFGKYLD----------STVIYPVEPHKKEKEAIATLKRLVKKYDVSL 371
Query: 528 GAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
A+ + S + ++ ++ K+++E +D LS +E+ +Y S + ++ P
Sbjct: 372 IALGNATASRETEL--VVNKLIQE--------VDGLSYAIVNEAGASVYSASTLGEEEFP 421
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKYGM 640
++ A+++ R LQ+P+A + + G G+ ++ KL DE+
Sbjct: 422 DLDVTIRGAISMARRLQDPMAELVKIEPKHIGIGQYQHDLDGKKL---------DEE--- 469
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFV 700
+ +V+ D N+VG+ IN A + L ++SGL A ++ + G I RKD
Sbjct: 470 LSKVVEDAVNEVGVSINNA-----SYKLLSYVSGLNANLAKRIEEDF-KEGKIVYRKDLK 523
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+ GLG K + GFLR S + LLD+T +HPESY +A++L E
Sbjct: 524 SVKGLGDKTYKLCAGFLRFPDSPE---------LLDNTAVHPESYKIAKKLEGE 568
>gi|307288251|ref|ZP_07568249.1| S1 RNA binding domain protein [Enterococcus faecalis TX0109]
gi|422704285|ref|ZP_16762095.1| S1 RNA binding domain protein [Enterococcus faecalis TX1302]
gi|306500767|gb|EFM70087.1| S1 RNA binding domain protein [Enterococcus faecalis TX0109]
gi|315164183|gb|EFU08200.1| S1 RNA binding domain protein [Enterococcus faecalis TX1302]
Length = 730
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 178/794 (22%), Positives = 312/794 (39%), Gaps = 180/794 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKIN---- 252
Query: 374 DCKEHYLSDGVSKSAQLWNDQR-ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+H+ + K A + E D+ F+ P++ +E R+ ++ +A + +G
Sbjct: 253 ---DHFQRQLIGKQATSFAAPYIEAAYLDSYKRFIGPAIEREIRNELTEKADEQAIAIFG 309
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTG 491
+ L N + P + K + + P + ++D +G+V+
Sbjct: 310 ENLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----A 350
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 351 IQVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKA 405
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 406 VKRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELV 458
Query: 612 TL----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 459 KIDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ-- 504
Query: 665 QFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 ---LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK- 560
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-D 783
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 --------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVN 605
Query: 784 LLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT 843
L T L E ETL I LI +D R++ P ++ T +
Sbjct: 606 QLATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMED 650
Query: 844 LAEGRVVQATVRRV 857
L G +Q TVR V
Sbjct: 651 LKPGMEMQGTVRNV 664
>gi|229550202|ref|ZP_04438927.1| S1 domain RNA-binding protein [Enterococcus faecalis ATCC 29200]
gi|257422802|ref|ZP_05599792.1| S1 RNA binding protein [Enterococcus faecalis X98]
gi|307277561|ref|ZP_07558653.1| S1 RNA binding domain protein [Enterococcus faecalis TX2134]
gi|312952309|ref|ZP_07771184.1| S1 RNA binding domain protein [Enterococcus faecalis TX0102]
gi|421512569|ref|ZP_15959373.1| Transcription accessory protein (S1 RNA-binding) [Enterococcus
faecalis ATCC 29212]
gi|422691986|ref|ZP_16750012.1| S1 RNA binding domain protein [Enterococcus faecalis TX0031]
gi|422706861|ref|ZP_16764559.1| S1 RNA binding domain protein [Enterococcus faecalis TX0043]
gi|422726857|ref|ZP_16783300.1| S1 RNA binding domain protein [Enterococcus faecalis TX0312]
gi|424759626|ref|ZP_18187288.1| Tex-like protein [Enterococcus faecalis R508]
gi|229304640|gb|EEN70636.1| S1 domain RNA-binding protein [Enterococcus faecalis ATCC 29200]
gi|257164626|gb|EEU94586.1| S1 RNA binding protein [Enterococcus faecalis X98]
gi|306505826|gb|EFM75004.1| S1 RNA binding domain protein [Enterococcus faecalis TX2134]
gi|310629693|gb|EFQ12976.1| S1 RNA binding domain protein [Enterococcus faecalis TX0102]
gi|315153272|gb|EFT97288.1| S1 RNA binding domain protein [Enterococcus faecalis TX0031]
gi|315155950|gb|EFT99966.1| S1 RNA binding domain protein [Enterococcus faecalis TX0043]
gi|315157882|gb|EFU01899.1| S1 RNA binding domain protein [Enterococcus faecalis TX0312]
gi|401674373|gb|EJS80727.1| Transcription accessory protein (S1 RNA-binding) [Enterococcus
faecalis ATCC 29212]
gi|402404503|gb|EJV37121.1| Tex-like protein [Enterococcus faecalis R508]
Length = 730
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|389581130|ref|ZP_10171157.1| transcriptional accessory protein [Desulfobacter postgatei 2ac9]
gi|389402765|gb|EIM64987.1| transcriptional accessory protein [Desulfobacter postgatei 2ac9]
Length = 715
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 171/714 (23%), Positives = 283/714 (39%), Gaps = 162/714 (22%)
Query: 56 LSISRD------DIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE 109
++ISRD + LDLL Q +PFIA YRKE SL +EV
Sbjct: 5 ITISRDTGLKENQVAAVLDLLD-QGATVPFIARYRKERTGSL------DEV--------- 48
Query: 110 RTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFD 169
AI D+ + L ++ Q+ K E R++Y E
Sbjct: 49 ------------AISDIRDRATALNALEARKQAIIKSL---EERQLYTE----------- 82
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
+ + +E A+ ++DV K+ RPK+ T+ + + GL
Sbjct: 83 ELGRQIENADAMTRLEDVYEKY-----------------RPKKRTRATIAREKGL----- 120
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEIS 289
E L + + + G LE KE AS F + Q GAR + A I+
Sbjct: 121 ------EPLAMMILEPETGMNLE--KE-----ASKFIGPDVANPQEAWAGARDIIAEIIN 167
Query: 290 CEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ +R +R +F+ A++ D F + W E+P K + L +
Sbjct: 168 EDATIRSEIRDLFIKTAMIHATVIKGKDEDGAKFKDY--FDW--EEPAFKAPSHRILAML 223
Query: 350 KAEEEKLLQVTIKLP--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELIL---KDALD 404
+ EK+L+V + LP E +LN + H + G K L RE IL +DA
Sbjct: 224 RGAGEKILRVHV-LPDEEKALNII------HGIYPGKRK---LCPGSREQILAAAEDAYK 273
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
L S+ EA ++ +A + + L + ++P P VLA
Sbjct: 274 RLLSKSIENEALRMLKQKADEKAVAVFSDNLRQVL-----------LSPPLGGRP-VLAI 321
Query: 465 CWGPG-KPETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQ 521
PG + LD++G++V DV+ + K +L+ +++
Sbjct: 322 --DPGFRTGCKIACLDATGKLVHHDVIHPHT-----------PNGKQTASQLIPELVNRY 368
Query: 522 PHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRI 581
+GA+ + + + I ++ P DV ++ DES +Y S
Sbjct: 369 K----IGAIAVGNGTAGRETESFIRELT--LPEDV-------DVIMVDESGASIYSASEN 415
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMI 641
+ ++ P V+ AV++GR L +PLA + + + ++ +N L +
Sbjct: 416 AREEFPDHDITVRGAVSIGRRLMDPLAELVKVEPKSIGVGQYQHDVDQNMLQ-----TAL 470
Query: 642 EQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVT 701
+ V+V NQVG++ N A + L +SGL AA++ + GA +R DF+
Sbjct: 471 DDVVVSCVNQVGVEANTASKQL-----LSRVSGLNAGIAANMVKYRDENGAFTSRTDFLK 525
Query: 702 AHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LGKK F A GFLR++ LD + IHPESY + +++AK +
Sbjct: 526 VPRLGKKAFEQAAGFLRIQNGKNP---------LDRSGIHPESYPVVKQMAKNL 570
>gi|283771231|ref|ZP_06344120.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus H19]
gi|283459436|gb|EFC06529.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus H19]
Length = 716
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|417925007|ref|ZP_12568434.1| Tex-like protein N-terminal domain protein [Finegoldia magna
SY403409CC001050417]
gi|341592304|gb|EGS35190.1| Tex-like protein N-terminal domain protein [Finegoldia magna
SY403409CC001050417]
Length = 697
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 194/880 (22%), Positives = 343/880 (38%), Gaps = 218/880 (24%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +L I D++++ ++LL + IPFIA YRKE +L
Sbjct: 6 KLSEELDIKYDNVVKTVELLD-EGNTIPFIARYRKEITGNL------------------- 45
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQ-QLFD 169
+ L ++D LQ+RK D TRL Q +L +
Sbjct: 46 -----TDETLRQLNDRLTYLRNLQERKD------------------DITRLIDEQGKLTE 82
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
+ K ++ A E++D+ L F +PK+ T+ S + GL VA
Sbjct: 83 DLKKQIDEAAILTELEDIYLPF-----------------KPKKRTRGSIAVELGLQPVAD 125
Query: 230 KFGYSSEQLGLQLSLEKMGDEL---EDPKETPEEMASNFKC-AMFNSSQAVLQGARHMAA 285
E+ L +EK E E+ K + +A + A F S Q V
Sbjct: 126 MI---MEKTHLLAEIEKKASEFINGEEIKTVDDAVAKSLDIIAEFVSEQKVF-------- 174
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAI-DSFHQFAGVKWLREKPLRKFEDAQ 344
R VR+ F+ A++ T + +S ++ F+ + ++ + +
Sbjct: 175 ---------RDIVRNSFVTEAILKTEEKNEDESGTYKMYYDFS-------EKVKDVKAHR 218
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
L I + E+E L+V+ L +D +F + K+ D E +KD+
Sbjct: 219 ILAIFRGEKEGFLKVSFVLNDDY--NIF-----KIMRKIARKNDFETYDLIEKAVKDSYK 271
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
++PS+ E R M K + + S+G ++ +++ P
Sbjct: 272 RLIVPSIETEVRQSM-------------KEMADDESIGVFK---SNLKP----------Y 305
Query: 465 CWGPGKPETTFVMLD---SSGEVVDVL-----FTGCLTLRSQNVRDQQSKKNDQERLLKF 516
P ET + LD +G V V+ F + + R Q + + E L +F
Sbjct: 306 LMQPPIKETAIIGLDPGFRTGCKVAVISEYGDFLDSAVIYVTDARKQIQRAD--ETLKEF 363
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG--DESLPR 574
+ + ++ +G S + E++ D+ ++D+ I Y +E+
Sbjct: 364 IKKYNVKLIAIGNGTAS-------------RETEKYVSDLLAQIDD-EIFYAIVNEAGAS 409
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
+Y S+++ ++ P ++ A+++ R +Q+PLA + + S + ++ +
Sbjct: 410 IYSASKLAIEEFPDLDVTIRGAISIARRIQDPLAELVKISPQ-----SIGVGQYQHDVNQ 464
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+ +E+V+ D N VG++IN A A L ++SG+ A ++ + G+
Sbjct: 465 KKLKSSLEEVVEDCVNTVGVNINTA-----SSALLNYVSGITKTTAKNIVDYKIENGSFT 519
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
R++ + G+G K FV GFLR+ S + +LD+T +HPESY +A+++ K
Sbjct: 520 NRQEILKVKGIGPKAFVQCAGFLRIPESEE---------ILDNTEVHPESYEIAKQIMK- 569
Query: 755 VYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELI 814
DLND +D ++ E TL I EL
Sbjct: 570 -------YDLND-----------------------IDVKKLSEELEVGEPTLRDIIEELK 599
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA---ICVLESGLA 871
+D R++ +P ++ I D L EG +V TVR V A I + E GL
Sbjct: 600 KPGRDPRDEMPKPVLRQDVLSI-----DDLEEGMIVTGTVRNVVDFGAFIDIGIKEDGLC 654
Query: 872 GM-LMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNR 909
+ M Y + R+ E+SD + KI I K R
Sbjct: 655 HISKMSNSYIKNPREVCEVSDTVK------VKIIGIDKER 688
>gi|15925053|ref|NP_372587.1| transcription accessory protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927638|ref|NP_375171.1| hypothetical protein SA1868 [Staphylococcus aureus subsp. aureus
N315]
gi|148268515|ref|YP_001247458.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus JH9]
gi|150394578|ref|YP_001317253.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
subsp. aureus JH1]
gi|156980379|ref|YP_001442638.1| hypothetical protein SAHV_2048 [Staphylococcus aureus subsp. aureus
Mu3]
gi|255006852|ref|ZP_05145453.2| hypothetical protein SauraM_10300 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257794513|ref|ZP_05643492.1| transcription accessory protein [Staphylococcus aureus A9781]
gi|258411257|ref|ZP_05681535.1| transcription accessory protein [Staphylococcus aureus A9763]
gi|258419773|ref|ZP_05682739.1| transcription accessory protein [Staphylococcus aureus A9719]
gi|258438080|ref|ZP_05689459.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
A9299]
gi|258441328|ref|ZP_05690813.1| transcription accessory protein [Staphylococcus aureus A8115]
gi|258446978|ref|ZP_05695130.1| transcription accessory protein [Staphylococcus aureus A6300]
gi|258449789|ref|ZP_05697889.1| transcription accessory protein [Staphylococcus aureus A6224]
gi|258453473|ref|ZP_05701452.1| transcription accessory protein [Staphylococcus aureus A5937]
gi|269203697|ref|YP_003282966.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus ED98]
gi|282895211|ref|ZP_06303427.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
A8117]
gi|282929290|ref|ZP_06336861.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
A10102]
gi|295407609|ref|ZP_06817400.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
A8819]
gi|296275694|ref|ZP_06858201.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus MR1]
gi|297246606|ref|ZP_06930437.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
A8796]
gi|384865248|ref|YP_005750607.1| S1 RNA binding domain-containing protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|387151189|ref|YP_005742753.1| Transcription accessory protein (S1 RNA-binding domain)
[Staphylococcus aureus 04-02981]
gi|415694724|ref|ZP_11456024.1| hypothetical protein CGSSa03_08001 [Staphylococcus aureus subsp.
aureus CGS03]
gi|417650829|ref|ZP_12300593.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21172]
gi|417801279|ref|ZP_12448377.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21318]
gi|418654171|ref|ZP_13216085.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-99]
gi|418662760|ref|ZP_13224294.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-122]
gi|418881759|ref|ZP_13435971.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418884388|ref|ZP_13438578.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418895658|ref|ZP_13449749.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418920892|ref|ZP_13474820.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418932380|ref|ZP_13486208.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418991980|ref|ZP_13539638.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|419784341|ref|ZP_14310114.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-M]
gi|424770917|ref|ZP_18198091.1| Tex-like protein [Staphylococcus aureus subsp. aureus CM05]
gi|443636540|ref|ZP_21120644.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21236]
gi|13701858|dbj|BAB43150.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247836|dbj|BAB58225.1| similar to RNA binding protein, contains S1 domain [Staphylococcus
aureus subsp. aureus Mu50]
gi|147741584|gb|ABQ49882.1| RNA binding S1 domain protein [Staphylococcus aureus subsp. aureus
JH9]
gi|149947030|gb|ABR52966.1| RNA binding S1 domain protein [Staphylococcus aureus subsp. aureus
JH1]
gi|156722514|dbj|BAF78931.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257788485|gb|EEV26825.1| transcription accessory protein [Staphylococcus aureus A9781]
gi|257840012|gb|EEV64478.1| transcription accessory protein [Staphylococcus aureus A9763]
gi|257844255|gb|EEV68638.1| transcription accessory protein [Staphylococcus aureus A9719]
gi|257848497|gb|EEV72487.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
A9299]
gi|257852372|gb|EEV76297.1| transcription accessory protein [Staphylococcus aureus A8115]
gi|257854211|gb|EEV77162.1| transcription accessory protein [Staphylococcus aureus A6300]
gi|257856963|gb|EEV79864.1| transcription accessory protein [Staphylococcus aureus A6224]
gi|257864345|gb|EEV87094.1| transcription accessory protein [Staphylococcus aureus A5937]
gi|262075987|gb|ACY11960.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus ED98]
gi|282589100|gb|EFB94199.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
A10102]
gi|282762401|gb|EFC02545.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
A8117]
gi|285817728|gb|ADC38215.1| Transcription accessory protein (S1 RNA-binding domain)
[Staphylococcus aureus 04-02981]
gi|294967507|gb|EFG43545.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
A8819]
gi|297176506|gb|EFH35772.1| RNA-binding S1 domain-containing protein [Staphylococcus aureus
A8796]
gi|312830415|emb|CBX35257.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128402|gb|EFT84411.1| hypothetical protein CGSSa03_08001 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329727782|gb|EGG64234.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21172]
gi|334277149|gb|EGL95384.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21318]
gi|375016607|gb|EHS10243.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-99]
gi|375035534|gb|EHS28652.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-122]
gi|377692956|gb|EHT17333.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377711462|gb|EHT35693.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377713221|gb|EHT37430.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377721388|gb|EHT45520.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377729755|gb|EHT53838.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377762437|gb|EHT86300.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC348]
gi|383364165|gb|EID41481.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-M]
gi|402347916|gb|EJU82924.1| Tex-like protein [Staphylococcus aureus subsp. aureus CM05]
gi|408424027|emb|CCJ11438.1| Similar to RNA binding protein, contains S1 domain [Staphylococcus
aureus subsp. aureus ST228]
gi|408426016|emb|CCJ13403.1| Similar to RNA binding protein, contains S1 domain [Staphylococcus
aureus subsp. aureus ST228]
gi|408428004|emb|CCJ15367.1| Similar to RNA binding protein, contains S1 domain [Staphylococcus
aureus subsp. aureus ST228]
gi|408429993|emb|CCJ27158.1| Similar to RNA binding protein, contains S1 domain [Staphylococcus
aureus subsp. aureus ST228]
gi|408431979|emb|CCJ19294.1| Similar to RNA binding protein, contains S1 domain [Staphylococcus
aureus subsp. aureus ST228]
gi|408433974|emb|CCJ21259.1| Similar to RNA binding protein, contains S1 domain [Staphylococcus
aureus subsp. aureus ST228]
gi|408435966|emb|CCJ23226.1| Similar to RNA binding protein, contains S1 domain [Staphylococcus
aureus subsp. aureus ST228]
gi|408437949|emb|CCJ25192.1| Similar to RNA binding protein, contains S1 domain [Staphylococcus
aureus subsp. aureus ST228]
gi|443407579|gb|ELS66129.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21236]
Length = 716
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 208/497 (41%), Gaps = 71/497 (14%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL 751
LD+T IHPESY + +L
Sbjct: 552 LDNTSIHPESYKVTYQL 568
>gi|282917411|ref|ZP_06325164.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus D139]
gi|282318613|gb|EFB48970.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus D139]
Length = 716
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSIGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|406660846|ref|ZP_11068974.1| hypothetical protein B879_00982 [Cecembia lonarensis LW9]
gi|405555399|gb|EKB50433.1| hypothetical protein B879_00982 [Cecembia lonarensis LW9]
Length = 749
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 155/717 (21%), Positives = 274/717 (38%), Gaps = 164/717 (22%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +L+I + ++LL + +PFI+ YRKE SL +EV
Sbjct: 8 KVAEELNIKVKQVTDTIELLD-EGATVPFISRYRKEVTGSL------DEVQ--------- 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI D ++ L KR+ A+ K EE+ + L +
Sbjct: 52 ---------VAAIRDRIQQLRELDKRREAIL----KSIEEQGK-------------LTPA 85
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ + + AAET ++D L+ P YK PKR TK + + GL +A+K
Sbjct: 86 LEEKINAAETMSVLED------LYLP----------YK-PKRRTKATIAREKGLEPLATK 128
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+ LQ EK D ++ N+ + LQGAR + A I+
Sbjct: 129 I-FEQGSFDLQEEGEKYIDAEKE----------------VNTLEEALQGARDIIAEWINE 171
Query: 291 EPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQK 350
+RK +R +F++ + P + F + W +P++ + L +++
Sbjct: 172 NVELRKKMRDLFIEEGQFVSKVIPGKEQEAIKFKDY--FDWT--EPIKTAPSHRVLAMRR 227
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWN------DQRELILKDALD 404
E+E L + C + + + + S L N +Q + +KD
Sbjct: 228 GEKELFL-------------MLDSCPDEFSALALMDSMVLENAANAAVEQVRVAIKDCYK 274
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD-NDITPDEEAAPRVLA 463
L PSM E R +A + + + L + P K I P + +
Sbjct: 275 RLLKPSMETEVRLYTKKKADEEAIKVFAENLRQLLLAAPLGEKSVMAIDPGFRTGCKTV- 333
Query: 464 CCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD-HQP 522
C GP ++ D ++ + Q K + ++K +++ HQ
Sbjct: 334 -CLGPQGQLLSY----------DAIYPN----------EPQRKTAESGAIIKHLVEKHQV 372
Query: 523 HVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRIS 582
+ +G S + E + +G ++ + +ES +Y S ++
Sbjct: 373 EAIAIGNGTAS-------------RETEAFVKSLGLP-KQVIVTMVNESGASIYSASEVA 418
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKY 638
++ P V+ AV++GR L +PLA + + G G+ L+N L
Sbjct: 419 REEFPDHDLTVRGAVSIGRRLMDPLAELVKIDAKSIGVGQYQHDVDQSALKNSL------ 472
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
+ ++ N VG+++N A + L ++SGLGP A ++ G +R +
Sbjct: 473 ---DDTVMSCVNGVGVEVNTASKQ-----LLTYVSGLGPVLAQNIVAYRNENGPFKSRTE 524
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LG K F A GFLR+R S LD + +HPE Y L +++AK++
Sbjct: 525 IKKVPRLGDKAFEQAAGFLRIRNSKNP---------LDASAVHPERYELVEKMAKDI 572
>gi|342211119|ref|ZP_08703855.1| RNA (S1 domain)-binding protein [Mycoplasma anatis 1340]
gi|341578566|gb|EGS28939.1| RNA (S1 domain)-binding protein [Mycoplasma anatis 1340]
Length = 699
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 116/525 (22%), Positives = 223/525 (42%), Gaps = 79/525 (15%)
Query: 239 GLQLSLEKMGDEL---EDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR 295
+ L LE++ E+ D P + A+ F S + ++ A + + IS +P V
Sbjct: 115 AIALGLEELAREIFNNADINYNPYKHATKFINDKVVSVEFAIEQALFIISQWISQDPKVH 174
Query: 296 KYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEK 355
+V+ F + ++ T + +ID F + + + ++ ++ + L I +A + K
Sbjct: 175 DFVKEQFNNFGLIQTTKKKN---SIDEFKTYENY-YEFSQSVKTIQNYKILAINRAVKNK 230
Query: 356 LLQVTIKLPEDSLNKLFSDCKEHY-LSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKE 414
++ + K+ + L HY +S+ K+ + + R + +D+L ++PS+ +E
Sbjct: 231 IIDLKFKIKFEFL---------HYNISNMFFKNKRTFALVRTAV-EDSLKRLIIPSIERE 280
Query: 415 ARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC--CWGPGKPE 472
+ + RA+ + + L + + + + K +VLA + G
Sbjct: 281 VFNELFARAEKSSIEIFADNLESMLMMPAVKNK------------KVLAIDPAYVNG--- 325
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLG---A 529
ML +G D+L T + ++ +++ + + +LKF +P V+V+G A
Sbjct: 326 CKLAMLSETG---DLLETAVIYPNKPLLKIKEASEISAKVILKF----KPDVIVVGNGTA 378
Query: 530 VNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQ 589
N +C ++D + + + E +VG +Y S I+ + P
Sbjct: 379 SNETCQFMRDLVKYLKLNISVEMVSEVG---------------ASVYSASDIAIQEFPDL 423
Query: 590 KGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
K ++ A+ +GR Q+PL + + P S + ++ L +E ++ + V
Sbjct: 424 KVEMRSAINIGRKFQDPLNEIVKI-DPK----SIGIGQYQHDLNQNELAQALDFKVEKVV 478
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
N VG+++N A L ISG+ A ++ G R + LG K
Sbjct: 479 NSVGVNLNSATE-----VILTKISGISKNVAKNIINYRKENGEFKNRNELKKVKSLGAKT 533
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
F AVGFLR+ S + LD T IHPESY LA+++ KE
Sbjct: 534 FEQAVGFLRIFNSEE---------FLDQTNIHPESYVLAKKIMKE 569
>gi|256762307|ref|ZP_05502887.1| S1 RNA-binding domain-containing protein [Enterococcus faecalis T3]
gi|256683558|gb|EEU23253.1| S1 RNA-binding domain-containing protein [Enterococcus faecalis T3]
Length = 730
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GD--SAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKQTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|321496308|gb|EAQ39534.2| Transcriptional accessory protein [Dokdonia donghaensis MED134]
Length = 707
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 165/708 (23%), Positives = 273/708 (38%), Gaps = 161/708 (22%)
Query: 57 SISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKW 116
++S + L LL + +PFIA YRKE L D+ E
Sbjct: 12 TLSEKSVKATLQLLS-EDCTLPFIARYRKEATGGL--------------DEVE------- 49
Query: 117 HKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLE 176
+ + +L +++ L KRK ++ K EE+S L ++L D I KS
Sbjct: 50 ---IGKVIELKEQFETLVKRKKSIL----KSLEEQS---------VLTRELKDKIEKSQG 93
Query: 177 AAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
E +L+ P YK+ KR TK + GL +A
Sbjct: 94 LTTLE----------DLYLP----------YKK-KRKTKAETARINGLEPLAKII----- 127
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
M +D PE +A + +Q+ L+GARH+ A I+ +R
Sbjct: 128 ----------MSQNAQD----PEGLAHRYTNKEVPDAQSALEGARHIIAEWINERADIRN 173
Query: 297 YVRSIFMDNAVVSTCPT---PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEE 353
+R A + T D + A F + W + L + + L I +AE
Sbjct: 174 NIREQLKRFATIETKVVKKMADEEKA-QKFRDY--FDW--SESLSRCPSHRLLAILRAEN 228
Query: 354 EKLLQVTIKL-PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
E ++V + + E +L+K+ E L SA Q EL +KDA L P++
Sbjct: 229 EGYIRVKVVIDDERALDKI-----ERKLIRSRGDSAT----QIELAIKDAYKRLLFPALS 279
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KP 471
E S A + + K L + P K R+LA PG +
Sbjct: 280 NERLSEAKKTADETAIQVFAKNLKQLLLGSPLGEK------------RILA--LDPGFRT 325
Query: 472 ETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN 531
V LD+ G++ L ++ + K +D+ + K + + A+
Sbjct: 326 GCKLVCLDAQGQL----------LHNETIYPHAPKNDDKGAIKK--ISSLTDAYKIEAIA 373
Query: 532 LSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKG 591
+ + + ++ ++ H + + + E+ +Y S+I+ D+ P
Sbjct: 374 IGNGTASRETQRLVKRI---------HFRNAMEVFVVSEAGASIYSASKIARDEFPNYDV 424
Query: 592 NVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
V+ AV++GR LQ+PLA + + G G+ L+ L +Q + +
Sbjct: 425 TVRGAVSIGRRLQDPLAELVKIDAKSIGVGQYQHDVDQTALQKSL---------DQTVEN 475
Query: 648 VTNQVGLDINLAIHREWQFAP-LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLG 706
N VG++IN A AP L ++SG+GP+ A + R G TR++ LG
Sbjct: 476 CVNAVGVNINTA------SAPLLSYVSGIGPKLAEGVVRFRESEGPFKTRQEIKKVPRLG 529
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
K FV A GFLR+ + LD++ +HPE Y L +AK+
Sbjct: 530 GKAFVQAAGFLRITGAENP---------LDNSSVHPERYKLVASIAKD 568
>gi|253733103|ref|ZP_04867268.1| S1 domain RNA-binding protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|253728936|gb|EES97665.1| S1 domain RNA-binding protein [Staphylococcus aureus subsp. aureus
TCH130]
Length = 716
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 147/668 (22%), Positives = 273/668 (40%), Gaps = 105/668 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + +++++ V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKYALPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQELAKEV--YNRDIEGD-LNDDEDAL---EMAIEHVRDRPDLLKTY 788
LD+T IHPESY + +L ++ D+ D L D ++L E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKDKLNSLDMDELAIELQVGVPT----- 606
Query: 789 LLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGR 848
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 -LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLQEGM 644
Query: 849 VVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
+ TVR V A + G++ S + + + D + GDI+ I SI KN
Sbjct: 645 KLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDKN 703
Query: 909 RYQVFLVC 916
+ +V L
Sbjct: 704 KDKVSLTM 711
>gi|418283333|ref|ZP_12896080.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21202]
gi|365167669|gb|EHM59047.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21202]
Length = 716
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTASVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|384459562|ref|YP_005671982.1| Transcription accessory protein TEX, RNA-binding protein containing
S1 domain [Clostridium acetobutylicum EA 2018]
gi|325510251|gb|ADZ21887.1| Transcription accessory protein TEX, RNA-binding protein containing
S1 domain [Clostridium acetobutylicum EA 2018]
Length = 724
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 153/701 (21%), Positives = 287/701 (40%), Gaps = 145/701 (20%)
Query: 49 SPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDF 108
S + L I+ + + +++L + +PFIA YRKE L D+ E+N
Sbjct: 11 STRLAEKLKINVNQVKNVIEMLD-EGATVPFIARYRKERTGGL-SDVTLRELNES----- 63
Query: 109 ERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF 168
L + +LD ++++ ++S EE+ + L
Sbjct: 64 -----------LIYLRNLD------DRKETVIKSI-----EEQGK-------------LT 88
Query: 169 DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVA 228
D + + + AET EV+D L+ P YK PK+ T+ + + GL +A
Sbjct: 89 DELKEKVLKAETMTEVED------LYRP----------YK-PKKRTRATIALEKGLKSLA 131
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAV 286
E LG + GD E AS+F + N+ + L+GA + +
Sbjct: 132 D------EILGGKFK----GD--------INEFASSFINEEKGVNTIEEALKGAEDIISE 173
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWL 346
IS RK++R N V+ T + + + + ++ F ++ + K + L
Sbjct: 174 VISDNAEFRKWIRKYTYKNGVLETQGSSEEPTPYEMYYDF-------KEAVSKIPPHRVL 226
Query: 347 LIQKAEEEKLLQVTIKLP-EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN 405
I + E+EK+L V I E +N L +C ++ + E +KD+L
Sbjct: 227 AINRGEKEKILSVKIATDDEKIINYLVLNC---------LTGNEITDKYIEESVKDSLKR 277
Query: 406 FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACC 465
+ PS+ +E R+ ++ + ++ + + L + P + K
Sbjct: 278 LIYPSIEREIRAELTEKGENSAIEIFKANLKALLMQPPIKGK--------------AVLG 323
Query: 466 WGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHV 524
+ PG + +LD +G+++D T Q + + L + + H V
Sbjct: 324 YDPGFRTGCKIAVLDDTGKLLD-------TATVYATAPQNDVEGSIKTLKELIYKHNVGV 376
Query: 525 VVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSD 584
V LG S S E+I ++++E + G ++ V E+ +Y S +++
Sbjct: 377 VSLGNGTASRES-----EEVIARLLKEIKEEKGIDV---YYVIVSEAGASVYSASELAAK 428
Query: 585 QLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQV 644
+ P +++ A+++GR LQ+PL+ + + P S + ++ + P + ++ V
Sbjct: 429 EYPDINVSLRGAISIGRRLQDPLSELVKI-DPK----SIGVGQYQHDVAPKKMDESLKGV 483
Query: 645 MVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG 704
+ D N VG+D+N+A + L ++SG+ A ++ GA RK+ +
Sbjct: 484 VEDCVNNVGVDLNIATP-----SLLSYVSGINANIAKNIVDYREENGAFKNRKELLKVKR 538
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
LG K F GFLR+ + +LD+T +HPESY
Sbjct: 539 LGPKAFEQCAGFLRIMDGDE---------VLDNTSVHPESY 570
>gi|256965294|ref|ZP_05569465.1| RNA binding protein S1 [Enterococcus faecalis HIP11704]
gi|257086657|ref|ZP_05581018.1| RNA binding protein S1 [Enterococcus faecalis D6]
gi|257415932|ref|ZP_05592926.1| RNA binding protein S1 [Enterococcus faecalis ARO1/DG]
gi|257419130|ref|ZP_05596124.1| S1 RNA binding protein [Enterococcus faecalis T11]
gi|300860048|ref|ZP_07106136.1| Tex-like protein N-terminal domain protein [Enterococcus faecalis
TUSoD Ef11]
gi|307273397|ref|ZP_07554642.1| S1 RNA binding domain protein [Enterococcus faecalis TX0855]
gi|422722703|ref|ZP_16779253.1| S1 RNA binding domain protein [Enterococcus faecalis TX2137]
gi|422733765|ref|ZP_16790067.1| S1 RNA binding domain protein [Enterococcus faecalis TX0645]
gi|422738547|ref|ZP_16793742.1| S1 RNA binding domain protein [Enterococcus faecalis TX2141]
gi|424673403|ref|ZP_18110346.1| Tex-like protein [Enterococcus faecalis 599]
gi|428766811|ref|YP_007152922.1| transcription accessory protein (S1 RNA binding domain)
[Enterococcus faecalis str. Symbioflor 1]
gi|256955790|gb|EEU72422.1| RNA binding protein S1 [Enterococcus faecalis HIP11704]
gi|256994687|gb|EEU81989.1| RNA binding protein S1 [Enterococcus faecalis D6]
gi|257157760|gb|EEU87720.1| RNA binding protein S1 [Enterococcus faecalis ARO1/DG]
gi|257160958|gb|EEU90918.1| S1 RNA binding protein [Enterococcus faecalis T11]
gi|295112847|emb|CBL31484.1| Transcriptional accessory protein [Enterococcus sp. 7L76]
gi|300850866|gb|EFK78615.1| Tex-like protein N-terminal domain protein [Enterococcus faecalis
TUSoD Ef11]
gi|306509924|gb|EFM78949.1| S1 RNA binding domain protein [Enterococcus faecalis TX0855]
gi|315027448|gb|EFT39380.1| S1 RNA binding domain protein [Enterococcus faecalis TX2137]
gi|315145621|gb|EFT89637.1| S1 RNA binding domain protein [Enterococcus faecalis TX2141]
gi|315160293|gb|EFU04310.1| S1 RNA binding domain protein [Enterococcus faecalis TX0645]
gi|402352599|gb|EJU87443.1| Tex-like protein [Enterococcus faecalis 599]
gi|427184984|emb|CCO72208.1| transcription accessory protein (S1 RNA binding domain)
[Enterococcus faecalis str. Symbioflor 1]
Length = 730
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSLAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|418428124|ref|ZP_13001114.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus aureus subsp. aureus VRS2]
gi|418431009|ref|ZP_13003912.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus aureus subsp. aureus VRS3a]
gi|418434914|ref|ZP_13006767.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus aureus subsp. aureus VRS4]
gi|418437682|ref|ZP_13009461.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS5]
gi|418440611|ref|ZP_13012299.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS6]
gi|418443585|ref|ZP_13015173.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus aureus subsp. aureus VRS7]
gi|418446582|ref|ZP_13018045.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS8]
gi|418449668|ref|ZP_13021041.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS9]
gi|418452507|ref|ZP_13023831.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS10]
gi|418455463|ref|ZP_13026715.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS11a]
gi|418458339|ref|ZP_13029531.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS11b]
gi|387716599|gb|EIK04654.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus aureus subsp. aureus VRS2]
gi|387717026|gb|EIK05055.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus aureus subsp. aureus VRS3a]
gi|387723842|gb|EIK11550.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus aureus subsp. aureus VRS4]
gi|387725467|gb|EIK13077.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS5]
gi|387728882|gb|EIK16359.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS6]
gi|387733482|gb|EIK20662.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS8]
gi|387734910|gb|EIK22055.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus aureus subsp. aureus VRS7]
gi|387735195|gb|EIK22329.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS9]
gi|387742693|gb|EIK29504.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS10]
gi|387743078|gb|EIK29875.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS11a]
gi|387744346|gb|EIK31114.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus VRS11b]
Length = 712
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 208/497 (41%), Gaps = 71/497 (14%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 135 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 194
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 195 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 248
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 249 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 302
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 303 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 346
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 347 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 395
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 396 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 450
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 451 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 496
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 497 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 547
Query: 735 LDDTRIHPESYGLAQEL 751
LD+T IHPESY + +L
Sbjct: 548 LDNTSIHPESYKVTYQL 564
>gi|418879020|ref|ZP_13433251.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377692933|gb|EHT17312.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1165]
Length = 715
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 208/497 (41%), Gaps = 72/497 (14%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA------SSLLQYVSG 499
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 500 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 550
Query: 735 LDDTRIHPESYGLAQEL 751
LD+T IHPESY + +L
Sbjct: 551 LDNTSIHPESYKVTYQL 567
>gi|418915196|ref|ZP_13469163.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377754639|gb|EHT78546.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIGC340D]
Length = 716
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 208/497 (41%), Gaps = 71/497 (14%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASHETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL 751
LD+T IHPESY + +L
Sbjct: 552 LDNTSIHPESYKVTYQL 568
>gi|379021740|ref|YP_005298402.1| transcription accessory protein (S1 RNA-binding domain)
[Staphylococcus aureus subsp. aureus M013]
gi|359831049|gb|AEV79027.1| Transcription accessory protein (S1 RNA-binding domain)
[Staphylococcus aureus subsp. aureus M013]
Length = 716
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 145/667 (21%), Positives = 270/667 (40%), Gaps = 107/667 (16%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIVEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ + ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFIA--RQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++ L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRCYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ C+
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFI-------------AKCVIYPHP 349
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
V +++ + D F+ + + V L A+ S + + + + ++++H V
Sbjct: 350 PVAKKEAAEKD------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFL 914
N+ +V L
Sbjct: 703 NKDKVSL 709
>gi|229546000|ref|ZP_04434725.1| S1 domain RNA-binding protein [Enterococcus faecalis TX1322]
gi|255976017|ref|ZP_05426603.1| S1 RNA-binding domain-containing protein [Enterococcus faecalis T2]
gi|256852959|ref|ZP_05558329.1| S1 RNA-binding domain-containing protein [Enterococcus faecalis T8]
gi|256958797|ref|ZP_05562968.1| RNA binding protein S1 [Enterococcus faecalis DS5]
gi|257078828|ref|ZP_05573189.1| RNA binding protein S1 [Enterococcus faecalis JH1]
gi|294781179|ref|ZP_06746528.1| S1 RNA binding domain protein [Enterococcus faecalis PC1.1]
gi|307271207|ref|ZP_07552490.1| S1 RNA binding domain protein [Enterococcus faecalis TX4248]
gi|307279129|ref|ZP_07560187.1| S1 RNA binding domain protein [Enterococcus faecalis TX0860]
gi|307291304|ref|ZP_07571188.1| S1 RNA binding domain protein [Enterococcus faecalis TX0411]
gi|384518409|ref|YP_005705714.1| S1 RNA binding domain-containing protein [Enterococcus faecalis 62]
gi|397699694|ref|YP_006537482.1| S1 RNA binding domain protein [Enterococcus faecalis D32]
gi|422685373|ref|ZP_16743594.1| S1 RNA binding domain protein [Enterococcus faecalis TX4000]
gi|422694790|ref|ZP_16752778.1| S1 RNA binding domain protein [Enterococcus faecalis TX4244]
gi|422708284|ref|ZP_16765812.1| S1 RNA binding domain protein [Enterococcus faecalis TX0027]
gi|229308896|gb|EEN74883.1| S1 domain RNA-binding protein [Enterococcus faecalis TX1322]
gi|255968889|gb|EET99511.1| S1 RNA-binding domain-containing protein [Enterococcus faecalis T2]
gi|256711418|gb|EEU26456.1| S1 RNA-binding domain-containing protein [Enterococcus faecalis T8]
gi|256949293|gb|EEU65925.1| RNA binding protein S1 [Enterococcus faecalis DS5]
gi|256986858|gb|EEU74160.1| RNA binding protein S1 [Enterococcus faecalis JH1]
gi|294451746|gb|EFG20199.1| S1 RNA binding domain protein [Enterococcus faecalis PC1.1]
gi|306497535|gb|EFM67068.1| S1 RNA binding domain protein [Enterococcus faecalis TX0411]
gi|306504254|gb|EFM73466.1| S1 RNA binding domain protein [Enterococcus faecalis TX0860]
gi|306512705|gb|EFM81354.1| S1 RNA binding domain protein [Enterococcus faecalis TX4248]
gi|315030059|gb|EFT41991.1| S1 RNA binding domain protein [Enterococcus faecalis TX4000]
gi|315036792|gb|EFT48724.1| S1 RNA binding domain protein [Enterococcus faecalis TX0027]
gi|315147792|gb|EFT91808.1| S1 RNA binding domain protein [Enterococcus faecalis TX4244]
gi|323480542|gb|ADX79981.1| S1 RNA binding domain protein [Enterococcus faecalis 62]
gi|397336333|gb|AFO44005.1| S1 RNA binding domain protein [Enterococcus faecalis D32]
Length = 730
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|422701570|ref|ZP_16759410.1| S1 RNA binding domain protein [Enterococcus faecalis TX1342]
gi|315170000|gb|EFU14017.1| S1 RNA binding domain protein [Enterococcus faecalis TX1342]
Length = 730
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMPAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|257082728|ref|ZP_05577089.1| RNA binding protein S1 [Enterococcus faecalis E1Sol]
gi|256990758|gb|EEU78060.1| RNA binding protein S1 [Enterococcus faecalis E1Sol]
Length = 730
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 QRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|422718658|ref|ZP_16775309.1| S1 RNA binding domain protein [Enterococcus faecalis TX0017]
gi|315033707|gb|EFT45639.1| S1 RNA binding domain protein [Enterococcus faecalis TX0017]
Length = 730
Score = 86.7 bits (213), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|239637363|ref|ZP_04678345.1| protein YhgF [Staphylococcus warneri L37603]
gi|239596963|gb|EEQ79478.1| protein YhgF [Staphylococcus warneri L37603]
Length = 716
Score = 86.7 bits (213), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 119/528 (22%), Positives = 219/528 (41%), Gaps = 93/528 (17%)
Query: 244 LEKMGDELEDPK--ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVR-KYVRS 300
LE L PK E E A F + +QGA+ + A +IS P R + +++
Sbjct: 122 LEPFATWLLQPKLNENVESKAQMFINEEIKGVEEAIQGAQDIIAEQISDNPKYRSRILKN 181
Query: 301 IFMDNAVVSTCPTPDGDSA--IDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQ 358
++ +V+T D ++ +A +P++K + + L + + E+EK+L
Sbjct: 182 VYQHGQIVTTKKKKGEDEKEIFSMYYDYA-------EPIKKIANHRVLAVNRGEKEKILS 234
Query: 359 VTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELI---LKDALDNFLLPSMVKEA 415
V I+ + + K D + + N+ E++ +KD+L ++PS+ +E
Sbjct: 235 VKIEFDTEQVEK-----------DIEKQEIKSENEATEIVRNAIKDSLKRLIMPSIEREI 283
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTF 475
R ++ +A++ + + + L N + P + K + A R C P TF
Sbjct: 284 RGDLTEKAENHAINVFSENLRNLLLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPYGTF 339
Query: 476 VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQE----RLLKFMMDHQPHVVVLGAVN 531
V ++NV N E ++K + D+ ++ +G
Sbjct: 340 V--------------------AKNVIYPHPPVNKIEPAEKIVVKMINDYDVQLIAIGNGT 379
Query: 532 LSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKG 591
S + + I +++++ +V + +E+ +Y S I+ + P +
Sbjct: 380 ASRET-----EQFIANVIKKYNLNV-------QFIIVNEAGASVYSASEIARAEFPDFQV 427
Query: 592 NVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ AV++GR +Q+PL+ + + G G+ LE LT V+
Sbjct: 428 EERSAVSIGRRVQDPLSELVKIDPKSIGVGQYQHDVNQKELEKALTF---------VVET 478
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGK 707
NQVG+D+N A + LQ++SGL + A +L GAI KD LG
Sbjct: 479 AVNQVGVDVNTASR-----SLLQYVSGLSSQIAQNLIEYREENGAIKHHKDIAKVKRLGA 533
Query: 708 KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
K F ++GF+R+ + LD+T IHPESY + EL ++
Sbjct: 534 KTFEQSIGFMRIVDGSEP---------LDNTSIHPESYEVTYELLNQL 572
>gi|422867718|ref|ZP_16914288.1| Tex-like protein [Enterococcus faecalis TX1467]
gi|329577124|gb|EGG58596.1| Tex-like protein [Enterococcus faecalis TX1467]
Length = 730
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVIKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|167763615|ref|ZP_02435742.1| hypothetical protein BACSTE_01990 [Bacteroides stercoris ATCC
43183]
gi|167698909|gb|EDS15488.1| Tex-like protein N-terminal domain protein [Bacteroides stercoris
ATCC 43183]
Length = 710
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 124/551 (22%), Positives = 225/551 (40%), Gaps = 92/551 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L L++ +P PE+ A+ F
Sbjct: 107 KPKRKTRAEAARQKGL-----------EPLATLLMLQR------EPH--PEQRAAAFVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ L+GAR + A ++S R +R+ F A+++ + + +
Sbjct: 148 DVKDADDALKGARDIIAEQVSENERARNMLRNTFARQALLTAKVIKGKEEEGAKYRDYFD 207
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+PL++ + L I++AE E LL+V+I P D +C E L +S
Sbjct: 208 CS----EPLKRCSSHRLLAIRRAEAEGLLKVSIS-PNDE------ECVER-LERQFVQSN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
Q ++DA L PS+ E + RA + + + L + P +K
Sbjct: 256 NACGKQVAEAVQDAYKRLLKPSIETEFAAQSKERADDEAIRVFAENLRQLLLASPLGQK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + V LD+ G + L ++N+
Sbjct: 315 -----------RVMGI--DPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVN 351
Query: 508 NDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
+E +L K + ++ + +G N + + +D F + R E+
Sbjct: 352 QSKEAFAKLQKMIEAYKVEAIAVG--NGTASRETED-----FLKRQTFNR-------EVQ 397
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
I E +Y S+I+ D+ P V+ AV++ R L +PLA + + + S
Sbjct: 398 IFIVSEQGASIYSASKIARDEFPEYDVTVRGAVSIARRLMDPLAELVKI-----DPKSIG 452
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+ ++ + + ++Q + + N VG+++N A L +ISGLGP+ A ++
Sbjct: 453 VGQYQHDVDQSKLKKSLDQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQLAQNIV 507
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
GA +RK+ + +G K F GFLR+ + LD+T +HPES
Sbjct: 508 NYRAENGAFASRKELMKVPRMGAKAFEQCAGFLRIPDARNP---------LDNTAVHPES 558
Query: 745 YGLAQELAKEV 755
Y + +++AK++
Sbjct: 559 YHIVEQMAKDL 569
>gi|150020177|ref|YP_001305531.1| RNA-binding S1 domain-containing protein [Thermosipho melanesiensis
BI429]
gi|149792698|gb|ABR30146.1| RNA binding S1 domain protein [Thermosipho melanesiensis BI429]
Length = 662
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 125/597 (20%), Positives = 235/597 (39%), Gaps = 122/597 (20%)
Query: 201 GVDEGQYKRPKRSTKY---SSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP--- 254
G++E Q ++ ++ KY K + ++ K G + QL ++ +ELED
Sbjct: 41 GLNEIQLRKIEKRYKYLRNVEQLKIKILKILEKDGVLTPQLKKKIEHTFTLNELEDIYLP 100
Query: 255 ----KETPEEMA--------------SNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
K+T ++A + N + +++G + A + S VRK
Sbjct: 101 FKKRKKTKADIAIENGLLPLAEKSTKGTINLELVNEKEKIIEGITDILAQKFSHNDIVRK 160
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
+ + V + D + F K L L I + E+E
Sbjct: 161 KLEIFLIKYGYVKCKKKVKKKTKYDMYDNFT-------KKLSLLHPHNILSINRGEKEGA 213
Query: 357 LQVTIKLPEDSLNKLFSDC---KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVK 413
L+V + LPE +F+ K + G+ K W L S+ K
Sbjct: 214 LKVKLYLPEKFKEDIFNLMNWNKNEIVEKGLKKG---WK-------------ILFSSIEK 257
Query: 414 EARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPET 473
R +++ +A+ + + K L + P + R+LA G K
Sbjct: 258 RVRKILTEKAEERSIKVFSKNLKQLLLTPPLKN------------TRILAIDPG-NKTGC 304
Query: 474 TFVMLDSSGEVVD--VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN 531
V LD G ++ V++ + KN ++++LK + +H+ ++V+G
Sbjct: 305 KIVALDELGNPLEHAVIYPTAPYFDT---------KNSEKKILKMLQNHKLKLIVIGNGT 355
Query: 532 LSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKG 591
S + + I K ++++ + ++ +E+ +Y S I+ ++ P
Sbjct: 356 ASRET-----QQFIAKTIKKYNLKTKY-------IFSNEAGASVYSVSDIAIEEFPTLDP 403
Query: 592 NVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCP-LENFLTPDEKYGMIEQ 643
++ A+++GR +Q+PLA + + G G+ +I KL L+N +T
Sbjct: 404 TIRSAISIGRRVQDPLAELVKIDPKSLGMGQYQHDINQKKLAEELKNAVT---------- 453
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAH 703
D+ NQ+G+D+N A + L+ ++G+ P A + + G RK +
Sbjct: 454 ---DIVNQLGIDLNSASSK-----LLEHVAGITPSLAKKIVNFRKKIGKFTERKQLLEIE 505
Query: 704 GLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK-EVYNRD 759
GLG+K + GFLR++ L+ T IHPE Y +A E+ K +Y+ D
Sbjct: 506 GLGQKTYTQCAGFLRIKNGKNP---------LESTAIHPEHYKIANEILKNNIYDLD 553
>gi|422729075|ref|ZP_16785481.1| S1 RNA binding domain protein [Enterococcus faecalis TX0012]
gi|315150705|gb|EFT94721.1| S1 RNA binding domain protein [Enterococcus faecalis TX0012]
Length = 730
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 178/793 (22%), Positives = 311/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I E + L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLI--EKQGKLTKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|282849969|ref|ZP_06259352.1| S1 RNA binding domain protein [Veillonella parvula ATCC 17745]
gi|282580406|gb|EFB85806.1| S1 RNA binding domain protein [Veillonella parvula ATCC 17745]
Length = 766
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 159/773 (20%), Positives = 305/773 (39%), Gaps = 128/773 (16%)
Query: 151 ESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRP 210
E+RR + +++ D + KSLEAA +E++D+ L + RP
Sbjct: 62 ETRRQEIIASITEQEKMTDELMKSLEAATKLQELEDLYLPY-----------------RP 104
Query: 211 KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMF 270
K+ T+ + GL +A + G P E+A +
Sbjct: 105 KKRTRAMIARERGLEPLADMIINDTVTSG-----------------EPLEIAKEYVTEEV 147
Query: 271 NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVK 330
+ + +QGA + A +S R Y+R + + T D + F Q+A
Sbjct: 148 PTPEDAIQGASDIVAEIVSDSADFRAYLRKKMWNEGFIQAELTGD-EEVQQQFLQYAEYA 206
Query: 331 WLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ- 389
+P+R+ + L + + E+ L++ + +P D+ Y+ + K+ +
Sbjct: 207 ----EPVRQMPSHRILAVNRGEKLGALKLALTVPGDTYVA--------YMIQKLEKNPKS 254
Query: 390 LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDN 449
++ D + + DA + P++ +E R+ ++ A + +G L N + P
Sbjct: 255 IFADYKAAAVADAYKRLIFPALEREIRNELTENADEQAIKVFGVNLKNLLLQPPL----- 309
Query: 450 DITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
A V+ PG + ++D G V+D G L + ++++K
Sbjct: 310 --------AGHVI-MGLDPGYRTGCKMAIIDQQGNVLDY---GAYYLTNSEKLRKEAQKV 357
Query: 509 DQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG 568
+++ KF V L ++ S + + + M+EE D + +
Sbjct: 358 LADKIRKFK-------VTLLSIGNGTASYETE--QFASTMIEEEKLDCHY-------IIT 401
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPL 628
+E+ +Y S+++ D+LP ++ AV++ R +Q+PLA + + S +
Sbjct: 402 NEAGASVYSASKLAIDELPDLDVTIRGAVSIARRVQDPLAESVKI-----DPKSIGVGQY 456
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
++ + + ++QV+ V N VG+++N A A LQ ++G+ A ++
Sbjct: 457 QHDVNQKQLTHTLDQVVETVVNHVGVELNTA-----SPAILQHVAGISSAVAKNIVAYRQ 511
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
G +RK+ + LG F GFLR++ LD+T +HPESY LA
Sbjct: 512 ENGVFKSRKELLKVPRLGPAAFTQCAGFLRLQHGKNP---------LDNTSVHPESYELA 562
Query: 749 QELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL----LKTYLLDRHIKEKKRENKRE 804
+ + E L ++ ++D+ L +K L+D K +
Sbjct: 563 ERIIGE----------------LGFTLKDLQDKSQLEALQVKLPLVDADKMAAKLDAGVP 606
Query: 805 TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAIC 864
T+ I L +D R P + +++S E + G VV+ TV V A
Sbjct: 607 TVRDILAALAKPGRDPREDLPAPLTRK--HVVSLE---DIKVGTVVKGTVHNVVDFGAFV 661
Query: 865 VLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
G+L + + + + SD L GDI+ +I S+ R ++ L +
Sbjct: 662 DFGLKTNGLLHRSELCNSRQHP--SDVLAVGDIIEAQIISVDVKRNRIGLSVK 712
>gi|218441837|ref|YP_002380166.1| RNA binding S1 domain-containing protein [Cyanothece sp. PCC 7424]
gi|218174565|gb|ACK73298.1| RNA binding S1 domain protein [Cyanothece sp. PCC 7424]
Length = 718
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 202/494 (40%), Gaps = 84/494 (17%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC---PTPDGDSAIDSFHQF 326
S + L GA + A E++ + +R Y+R M V + P+G + + + F
Sbjct: 155 IKSEEDALNGASDILAEEVADKAEIRAYLREYLMKEGVFISRLKEEYPEGSTKYEMYRNF 214
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYL-SDGVS 385
+ ++K L + + E E +L V + + + + YL S +
Sbjct: 215 -------QASVKKIAPHNILALFRGESEGILTVDLDFDPNFV--------QSYLESQEIQ 259
Query: 386 KSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ 445
D + +LKD + + PS+++E RS K+W +E K +
Sbjct: 260 TKIPEIKDFYQKMLKDGFNRLIKPSLIREVRS----DRKTWADLESIKTFEENL------ 309
Query: 446 RKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQ 504
++ ++P P PG + +L +G+ +D + N R +
Sbjct: 310 -RNLLLSPPAGMKP---TMAIDPGFRTGCKVSILSETGKFLD--YQAIFPHSGNNQRLEA 363
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
K + K + +Q ++ +G N + + D + K + + P V
Sbjct: 364 EKT-----VKKLIETYQIELIAIG--NGTASRETDQFITEVLKTLAQKPIKV-------- 408
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL------CGPGR 618
IV +ES +Y S I+ ++ P V+ A+++GR LQ+PLA + + G +
Sbjct: 409 IV--NESGASIYSASDIAREEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQ 466
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
+ KL +E+ + N VG+D+N A + L F+SG+ P
Sbjct: 467 HDVDQKLLK-----------KKLEETVESCVNYVGVDLNTASKQ-----LLIFVSGITPS 510
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ + GA RKD + LG K F + GFLR+ R G+ + LD+T
Sbjct: 511 IANNIVEYRNQNGAFKNRKDLLKVSKLGAKSFEQSAGFLRI-RGGE--------NPLDNT 561
Query: 739 RIHPESYGLAQELA 752
+HPESYG+ + +A
Sbjct: 562 AVHPESYGVVKAIA 575
>gi|377557044|ref|ZP_09786710.1| Transcription accessory protein [Lactobacillus gastricus PS3]
gi|376166690|gb|EHS85579.1| Transcription accessory protein [Lactobacillus gastricus PS3]
Length = 724
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 139/631 (22%), Positives = 257/631 (40%), Gaps = 125/631 (19%)
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGE 199
+Q+ Y K E R+ +A +L D++ + +E+A V+D L+ P
Sbjct: 56 IQTTYHKAQELADRKQTVLKAIAEQDKLTDALKQQIESAPDLTTVED------LYLP--- 106
Query: 200 VGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPE 259
YK+ KR TK + GL +A+ + + + E + DE+ D
Sbjct: 107 -------YKQ-KRRTKAQIAKEQGLMPLANWLLHYEDTDLTTKAAEFVTDEVAD------ 152
Query: 260 EMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSA 319
+ L GA + A IS VR ++R N + T T G +
Sbjct: 153 -------------APTALSGAHEILAEAISEMSTVRAWLRDYTTKNGRIVTKVTKQG-AT 198
Query: 320 ID------SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
ID ++ F V ++ + L I + E+EK+L+V I++ + ++
Sbjct: 199 IDEKGVYQQYYDFDAV-------IKDMTSYRTLAINRGEKEKVLRVKIEVASEPID---- 247
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELIL---KDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
+YL+ + + + ND ++ +DA FL P++ +E R M+ A +
Sbjct: 248 ----NYLAFRLIR-GHVENDATRFVMAAAQDAYKRFLGPAIERELRHQMTEEADEQAINV 302
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--V 487
+G+ L++ + P + K + + P + +LD SG+++ V
Sbjct: 303 FGENLYHLLMQAPIKGK--------------MVLGFDPAYRTGCKLAVLDPSGKLIQTAV 348
Query: 488 LFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFK 547
++ ++ + QQ+ L + +Q +V +G S S + +
Sbjct: 349 IYPHPPAPEAKRAQAQQA-------FLDLINQYQIEMVAIGNGTASRES-----EQFVAT 396
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
+++ RDV + V +ES +Y S+ + D+ P + A+++GR LQ+PL
Sbjct: 397 ALKQLDRDVYY-------VIVNESGASVYSASQDARDEFPDLTVEKRSAISIGRRLQDPL 449
Query: 608 AMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
A + + G G+ L+ LT ++E+ + N+VG+++N A
Sbjct: 450 AELVKIDPQAIGVGQYQHDLPETELKTELT-----AVVERAV----NRVGVNLNTA---- 496
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+ L +ISGL A ++ + G R LG K + AVGFLR+
Sbjct: 497 -SYQLLTYISGLSATIAKNIVKYRDENGQYVDRTQLKKVSRLGPKAYQQAVGFLRIVDGD 555
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
LD+T IHPESY +A ++ ++
Sbjct: 556 NP---------LDNTDIHPESYPVATQILQD 577
>gi|339634906|ref|YP_004726547.1| transcriptional accessory protein [Weissella koreensis KACC 15510]
gi|420160904|ref|ZP_14667675.1| S1 domain RNA-binding protein [Weissella koreensis KCTC 3621]
gi|338854702|gb|AEJ23868.1| transcriptional accessory protein [Weissella koreensis KACC 15510]
gi|394745654|gb|EJF34472.1| S1 domain RNA-binding protein [Weissella koreensis KCTC 3621]
Length = 728
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 172/793 (21%), Positives = 321/793 (40%), Gaps = 158/793 (19%)
Query: 146 KRYEEESRRIYDETRLALNQQLFDS-ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDE 204
KR E+ R + ++Q +++S +++ L AA++ ++V+D + P
Sbjct: 66 KRLEDLQARKLTVQKALIDQSVWNSALAERLIAADSLQKVED------FYLP-------- 111
Query: 205 GQYKRPKRSTKYSSCSKAGLWEVASKF-GYSSEQLGLQLSLEKMGDELEDPKETPEEMAS 263
YK+ KR TK + +AGL +A K + ++ L Q++L D ++ ++ P+
Sbjct: 112 --YKQ-KRRTKATIAKEAGLMPLAQKIQSFPTDDLN-QIAL----DYVDPAQDLPD---- 159
Query: 264 NFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST-----CPTPDGDS 318
+AV+ G + A I +R+++R+ N V D S
Sbjct: 160 ---------VKAVMNGVHEIFAEVIGENAGLREWIRNYTQQNGTVDAKIKRGAQEQDPKS 210
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
++ F+ + +++ ++ Q L + + E+ +L V I++ + ++ E
Sbjct: 211 IYALYYDFS-------QKIKQIQNHQILAVNRGEKAGILSVGIEVDQLAI--------ER 255
Query: 379 YLSDGVSKSAQLWNDQRELIL---KDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
YL + S Q E+++ KDA F+ P++ +E R ++ +A + + +GK L
Sbjct: 256 YLKFRLVGSKQ--GAAAEVLVNAAKDAYKRFIGPAIEREIRKQLTAQASADAIKVFGKNL 313
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
++ + P + + + + PG + + ++D +G+
Sbjct: 314 YHLLMGAPLRGQ--------------VVLGFDPGIRTGSKLAVVDENGKF---------- 349
Query: 495 LRSQNVRDQQSKKND----QERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
L + ++ K D ++ ++ + +Q +V +G S S + I +++
Sbjct: 350 LEKAVIYPHRAAKYDPAGAKKIIINLVHKYQVTLVAIGNGTASRES-----QQFIADLIK 404
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
++ +L V +E+ +Y S I+ + P + + A+++ R LQ+P+A +
Sbjct: 405 S-------DLPDLKYVVVNEAGASVYSASDIARTEFPELQVEQRSAISIARRLQDPMAEL 457
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ ++ L E ++QV+ NQVG+++N A Q
Sbjct: 458 IKIDPQAVGVGQ---------YQHDLPTKELSEQLDQVLETAVNQVGVNLNTA---SAQL 505
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
L I+GL A ++ GA TR + LG K F A GFLR+ +
Sbjct: 506 --LLHIAGLTKTTAQNIVDYRDHNGAFKTRNELKKVAKLGPKAFEQAAGFLRIPNGTNS- 562
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
LD+T IHPESY +A+EL K + D+E R L+
Sbjct: 563 --------LDNTEIHPESYKVAKELLKRIDATDVES------------------RQQQLQ 596
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
D KE + TLY I L H +D R+Q + T L
Sbjct: 597 ALATDDVAKE--LQIGLPTLYDIIDALKHPGRDLRDQAISAVLRSDVL-----TLKDLKP 649
Query: 847 GRVVQATVRRVQGQRA---ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIK 903
G +Q TVR V A I V E GL + + D + GDI+T +K
Sbjct: 650 GMELQGTVRNVVDFGAFVDIGVHEDGLVHINEMVKNKNQHHKLNPHDHVAVGDIITVWVK 709
Query: 904 SIQKNRYQVFLVC 916
+ R ++ L
Sbjct: 710 EVDLKRERIGLTL 722
>gi|257426201|ref|ZP_05602616.1| S1 RNA binding domain-containing protein [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257270906|gb|EEV03079.1| S1 RNA binding domain-containing protein [Staphylococcus aureus
subsp. aureus 55/2053]
Length = 676
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 208/497 (41%), Gaps = 71/497 (14%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVENAIRGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + ++ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTAVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VAKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL 751
LD+T IHPESY + +L
Sbjct: 552 LDNTSIHPESYKVTYQL 568
>gi|418313991|ref|ZP_12925473.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21334]
gi|365234605|gb|EHM75535.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21334]
Length = 716
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 208/497 (41%), Gaps = 71/497 (14%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKLLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL 751
LD+T IHPESY + +L
Sbjct: 552 LDNTSIHPESYKVTYQL 568
>gi|281421926|ref|ZP_06252925.1| protein YhgF [Prevotella copri DSM 18205]
gi|281403980|gb|EFB34660.1| protein YhgF [Prevotella copri DSM 18205]
Length = 710
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 147/686 (21%), Positives = 270/686 (39%), Gaps = 156/686 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFI+ YRKE+ ++ +EVN + AI ++K + KR
Sbjct: 32 IPFISRYRKEKTGNM------DEVN------------------IEAIAQANEKLSEMAKR 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K + K EE+ + L D + K +E E++D+ L +
Sbjct: 68 KETIL----KTIEEQGK-------------LSDELKKRIEQCWDATELEDIYLPY----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+PKR T+ +AGL +A + E+ Q + + MGD+++D
Sbjct: 106 ------------KPKRRTRAQIAREAGLEPLAQLLLFQRERNPEQAARKFMGDKVKD--- 150
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST---CPT 313
+A LQGA+ + A +S R +R F A++++
Sbjct: 151 ----------------VEAALQGAKDIIAETVSENEQSRNQIRGEFRRGAIITSKVVAKK 194
Query: 314 PDGDSA--IDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
D + A + F+ +PL+K + L +++ E L+V+I ++
Sbjct: 195 KDEEEAQRFSDYFDFS-------EPLKKCSSHRLLAMRRGEAAGFLRVSISADDEQCQ-- 245
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
K HY+ G + L + + DA L PS+ E +L +A ++ +
Sbjct: 246 -DKLKRHYVH-GFGECQTLVGEA----VDDAFKRLLKPSIETEFAALSKQKADEEAIVVF 299
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVV--DVLF 489
+ L + P +K + D A CC LD+ G ++ ++++
Sbjct: 300 AENLRQLLLAAPLGQK-RVMAVDPGFANGCKTCC------------LDAQGNLIHHEIVY 346
Query: 490 TGCLTLRSQNVRDQQSKKNDQ-ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
R+++S+ +R++K +Q + +G + D ++ I F
Sbjct: 347 -------PHPPRNRKSEATAAIQRMVKM---YQVEAMAVGN-GTASRETSDWLHSIDFV- 394
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
HP D I E +Y S+I+ D+ P + V+ AV++GR L +PLA
Sbjct: 395 ---HPVD---------IYVVSEDGASIYSASKIARDEFPDEDVTVRGAVSIGRRLMDPLA 442
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ + + S + ++ + + ++ V++ N VG+++N A
Sbjct: 443 ELVKI-----DPKSIGVGQYQHDVDQTQLKKSLDTVVMSCVNSVGVNLNTASQH-----L 492
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L ++SGLGP A ++ GA +R LG F GFLR+ +
Sbjct: 493 LTYVSGLGPTLAKNIVEYRRENGAFASRAQLKKVPRLGPSAFEQCAGFLRIPGAKNP--- 549
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKE 754
LD++ +HPE Y L +++AK+
Sbjct: 550 ------LDNSAVHPERYALVEQMAKD 569
>gi|148643352|ref|YP_001273865.1| transcriptional accessory protein S1 RNA binding family protein
[Methanobrevibacter smithii ATCC 35061]
gi|148552369|gb|ABQ87497.1| transcriptional accessory protein, S1 RNA binding family, Tex
[Methanobrevibacter smithii ATCC 35061]
Length = 715
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 171/782 (21%), Positives = 319/782 (40%), Gaps = 127/782 (16%)
Query: 150 EESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDE--GQY 207
+E R +DE RL + L D +K +E + ++DD +LK + V +D+ Y
Sbjct: 46 DELLRKFDE-RLKYLRNLEDKKTKIIERIDNLGKLDD-NLKNQILNAETLVELDDLYRPY 103
Query: 208 KRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC 267
K KR T+ + + GL +AS + E+++P ++A N+
Sbjct: 104 KSKKR-TRATIAKQKGLEPLASLI---------------LAQEVKEP---VSKIAENYVT 144
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFA 327
+ + ++GA+ + A IS RK +R N V+ T +SA S ++
Sbjct: 145 DEVKTPKEAIEGAQDIIAEIISDNSTFRKKIRQNTFYNGVIETKAKNKDESA--SGYE-- 200
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
+ + + L K + L I +AE E +++V + + ED + + K H L + SK
Sbjct: 201 -IYFNYSEKLSKIPPHRILAINRAENEDIIKVKVDIEEDDIIQYL---KRHTLKN-CSKV 255
Query: 388 AQL--WNDQRELILKDALDN----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
++ +N I+ +++++ + P++ +E RS ++ +A+ + + K L +
Sbjct: 256 PEMIEYNPHTTPIITESIEDSYKRLISPAIEREIRSYLTKKAEEKSIEVFAKNLSQLLME 315
Query: 442 GPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNV 500
P K W P + ++DS+G+V++ T
Sbjct: 316 SPLSGKT--------------ILGWDPAFRTGCKLAVIDSTGKVLE-------TSLIYPT 354
Query: 501 RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
Q K ++ +L + + V+ +G N + + ++I I K
Sbjct: 355 EPQNKVKESEKVVLDLIKKYDVDVIAIG--NGTASRESEEIVANIIKNTS---------- 402
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGP 616
+ + +E+ +Y S+++ ++ P + AV++ R LQ+PLA + + G
Sbjct: 403 --VEYIIVNEAGASVYSASKLADEEFPDFNEGERSAVSIARRLQDPLAELVKIDPKSIGV 460
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLG 676
G+ L L G++E+V+ N+VG+D+N A + L ++SG+
Sbjct: 461 GQYQHDMNQKQLNESLG-----GVVERVV----NEVGVDLNTA-----SSSLLNYVSGIT 506
Query: 677 PRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLD 736
A ++ G RK+ + LGKK F GF+++ LD
Sbjct: 507 KSTAKNIISYREENGKFNNRKELLNVKKLGKKTFEQCAGFVKIDNPEHP---------LD 557
Query: 737 DTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKE 796
+T IHPESY A +L D L ++ + D LK L+
Sbjct: 558 NTTIHPESYDAAVKLL----------------DKLGYSLADIGS--DNLKLDNLNYDELS 599
Query: 797 KKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRR 856
K+ + TL I +EL +D R +P + I D L EG ++Q TVR
Sbjct: 600 KQLDVGVITLQDIVKELKKPGRDPREDMPKPVLRKNVLSI-----DDLEEGMIMQGTVRN 654
Query: 857 VQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQ--KNRYQVFL 914
+ A + G++ +D + L D + GDI+ K+ + +NR Q+ +
Sbjct: 655 IVDFGAFVDIGVHQDGLVHISQLADKFVKHPL-DIVSVGDIVDVKVLDVDLARNRIQLSM 713
Query: 915 VC 916
+
Sbjct: 714 LI 715
>gi|418561982|ref|ZP_13126451.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21262]
gi|371974820|gb|EHO92135.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21262]
Length = 716
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTISVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYKLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|217076628|ref|YP_002334344.1| S1 RNA binding domain protein [Thermosipho africanus TCF52B]
gi|217036481|gb|ACJ75003.1| S1 RNA binding domain protein [Thermosipho africanus TCF52B]
Length = 675
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/526 (19%), Positives = 220/526 (41%), Gaps = 86/526 (16%)
Query: 244 LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM 303
LE + +P+ +E+ F +F++ V++G ++ A S + +RK + +
Sbjct: 118 LELYNKLINNPESFEKEIPKYFN-KIFDTKDKVIEGLINIIAQNFSHDENIRKRLEFLIF 176
Query: 304 DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL 363
+ + D + D++ F+ + ++ ++ L I + E+E +L+V I L
Sbjct: 177 EYGYLKCTKKVDYKTKYDAYENFS-------QKIKNLKEYSVLSINRGEKENILKVQIVL 229
Query: 364 PEDSLNKLFSDCKEHYLSDGVSKSAQL-WNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
+ N++F K ++ + K +L W L S+ K R+ ++ +
Sbjct: 230 DDKFKNEIFKLTKLDLKNEIILKGLELGWRK-------------LFDSIKKRIRNQLTQK 276
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSG 482
A++ ++ + K L + P + K R+LA G K +LD +G
Sbjct: 277 AENRAIVIFSKNLKQLLLTPPLKDK------------RILAIDPG-NKTGCKIAVLDENG 323
Query: 483 EVVD--VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
+ ++ ++F +N ++ +++ + +++V+G S + K
Sbjct: 324 KFLEKAIIFPTP---------PHNDIENSEKIVIELIKKFDLNLIVIGNGTASRETQK-- 372
Query: 541 IYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALG 600
I +++ DV + ++ +E+ +Y S+++ ++ P ++ A+++G
Sbjct: 373 ---FIVNTIKKFNLDVKY-------IFANEAGASVYSVSKLAMEEFPNLDPTIRSAISIG 422
Query: 601 RYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDI 656
R +Q+PL+ + G G+ LE L + DV N VG+++
Sbjct: 423 RRVQDPLSEFVKIDPKSLGVGQYQHDVNQKRLEEELN---------NITKDVVNMVGVNL 473
Query: 657 NLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGF 716
N A + L+++SG+ P A + + + G R + GLG+K F GF
Sbjct: 474 NTASAK-----LLEYVSGITPSLAKKIVKYREKHGKFIERNQLLNIEGLGEKTFEQCAGF 528
Query: 717 LRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK-EVYNRDIE 761
LR+ L+ +RIHPE Y +A ++ + N DIE
Sbjct: 529 LRIIDGKNP---------LEKSRIHPEQYEIANKIISLNLDNIDIE 565
>gi|329954547|ref|ZP_08295638.1| Tex-like protein [Bacteroides clarus YIT 12056]
gi|328527515|gb|EGF54512.1| Tex-like protein [Bacteroides clarus YIT 12056]
Length = 713
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 123/551 (22%), Positives = 225/551 (40%), Gaps = 92/551 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L L++ +P P + A++F
Sbjct: 107 KPKRKTRAEAARQKGL-----------EPLATLLMLQR------EPH--PRQRAADFVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
S L+GAR + A +S R +R+ F AV++ + + +
Sbjct: 148 DVKSPDDALKGARDIIAELVSENERARNTLRNTFARQAVLTAKVIKGKEEEGAKYRDYFD 207
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+PL++ + L I++AE E LL+V+I P+D +C E L +S
Sbjct: 208 CA----EPLKRCSSHRLLAIRRAEAEGLLKVSIS-PDDE------ECVER-LERQFVQSG 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
Q ++DA L PS+ E + RA + + + L + P +K
Sbjct: 256 NACGKQVAEAVQDAYKRLLKPSIETEFAAQSKERADDEAIRVFAENLRQLLLASPLGQK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + V LD+ G + L ++N+
Sbjct: 315 -----------RVMG--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVN 351
Query: 508 NDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
+E +L K + ++ + +G N + + +D ++ H + E+
Sbjct: 352 QGKEAFAKLQKMIEAYKVEAIAIG--NGTASRETED-------FLKRHTFN-----REVQ 397
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
I E +Y S+I+ D+ P V+ AV++ R L +PLA + + + S
Sbjct: 398 IFIVSEQGASIYSASKIARDEFPEYDVTVRGAVSIARRLMDPLAELVKI-----DPKSIG 452
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+ ++ + + ++Q + + N VG+++N A L +ISGLGP+ A ++
Sbjct: 453 VGQYQHDVDQSKLKKSLDQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQLAQNIV 507
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
GA +RK+ + +G K F GFLR+ + LD+T +HPES
Sbjct: 508 NYRAENGAFASRKELMKVPRMGAKAFEQCAGFLRIPDAKNP---------LDNTAVHPES 558
Query: 745 YGLAQELAKEV 755
Y + +++A ++
Sbjct: 559 YHIVEQMAADL 569
>gi|256962096|ref|ZP_05566267.1| RNA binding protein S1 [Enterococcus faecalis Merz96]
gi|293383118|ref|ZP_06629035.1| protein YhgF [Enterococcus faecalis R712]
gi|293387729|ref|ZP_06632274.1| protein YhgF [Enterococcus faecalis S613]
gi|312907293|ref|ZP_07766284.1| S1 RNA binding domain protein [Enterococcus faecalis DAPTO 512]
gi|312909911|ref|ZP_07768759.1| S1 RNA binding domain protein [Enterococcus faecalis DAPTO 516]
gi|256952592|gb|EEU69224.1| RNA binding protein S1 [Enterococcus faecalis Merz96]
gi|291079457|gb|EFE16821.1| protein YhgF [Enterococcus faecalis R712]
gi|291082918|gb|EFE19881.1| protein YhgF [Enterococcus faecalis S613]
gi|310626321|gb|EFQ09604.1| S1 RNA binding domain protein [Enterococcus faecalis DAPTO 512]
gi|311289869|gb|EFQ68425.1| S1 RNA binding domain protein [Enterococcus faecalis DAPTO 516]
Length = 730
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADEIKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSLAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|422736560|ref|ZP_16792823.1| S1 RNA binding domain protein [Enterococcus faecalis TX1341]
gi|315166715|gb|EFU10732.1| S1 RNA binding domain protein [Enterococcus faecalis TX1341]
Length = 730
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 311/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEK 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSLAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|386819027|ref|ZP_10106243.1| transcriptional accessory protein [Joostella marina DSM 19592]
gi|386424133|gb|EIJ37963.1| transcriptional accessory protein [Joostella marina DSM 19592]
Length = 708
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 159/742 (21%), Positives = 303/742 (40%), Gaps = 161/742 (21%)
Query: 57 SISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKW 116
SIS I + L++ Q IPFI+ YRKE +L++ +V +
Sbjct: 13 SISNKSIESTIHLIN-QDCTIPFISRYRKEAT----GNLDEVQVGD-------------- 53
Query: 117 HKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLE 176
I L K + LQKRK ++ K EE++ L D + + +E
Sbjct: 54 ------IVTLKKDFEALQKRKESIL----KSLEEQA-------------VLSDELKQKIE 90
Query: 177 AAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
+T ++D L+ P YK+ R TK + + GL +A
Sbjct: 91 NTDTLIALED------LYLP----------YKKS-RKTKADTARENGLEPLA-------- 125
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
++ + + ++L+ +AS + +S + L+GARH+ A I+ +R
Sbjct: 126 ----KIIMAQNANDLDF-------LASKYLNKNISSEENALEGARHIIAEWINERIDIRN 174
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
+R+ + + ++T ++ W +PL++ + L I +AE E
Sbjct: 175 SLRNQYDRYSEITTKVVKAKAEEENAQKYRDYFDW--NEPLKRCPSHRLLAILRAENEGF 232
Query: 357 LQVTIKLPED-SLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
+++ I + +D +L+ Y+ + + KS Q EL +KDA L P++ EA
Sbjct: 233 IKLKISIDQDRALD---------YIENRIIKSDNHCATQIELAIKDAFKRLLAPALANEA 283
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETT 474
S +A + + + K L N++ + P P E +LA PG +
Sbjct: 284 LSNAKEKADTTAIAVFAKNL-NQLLLSP---------PLGEKT--ILAI--DPGFRTGCK 329
Query: 475 FVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSC 534
V LD G +V ++ + + +K + + K + + A+
Sbjct: 330 IVCLDKQGGLV----------HNETIYPHEPRKEATQAIKKISTLVNAYKIEAIAIGNGT 379
Query: 535 TSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
S + E + + E D + + E+ +Y S+I+ ++ P V+
Sbjct: 380 AS----------RETETLIKRIRFETD-VQVFVVSEAGASIYSASKIAREEFPNYDVTVR 428
Query: 595 RAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGL 654
AV++GR L +PLA + + E S + ++ + + +++V+ N+VG+
Sbjct: 429 GAVSIGRRLSDPLAELVKI-----EAKSIGVGQYQHDVDQTKLKEALDRVVESCVNKVGV 483
Query: 655 DINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAV 714
+IN A + L ++SG+G + A ++ GA +R++ LG K F +
Sbjct: 484 NINTA-----SPSLLSYVSGIGEKLAENIVIYRDENGAFTSREEIKNVTRLGNKAFEQSA 538
Query: 715 GFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMA 774
GFLR++ + LDD+ +HPESY + +++A + L++
Sbjct: 539 GFLRIKNAKNP---------LDDSAVHPESYSVVKKMAAD----------------LKVN 573
Query: 775 IEHVRDRPDLLKTYLLDRHIKE 796
I+ + +L+KT L ++ E
Sbjct: 574 IQELVGNKELIKTIQLKKYCTE 595
>gi|386729750|ref|YP_006196133.1| transcription accessory protein [Staphylococcus aureus subsp.
aureus 71193]
gi|387603341|ref|YP_005734862.1| protein YhgF [Staphylococcus aureus subsp. aureus ST398]
gi|404479341|ref|YP_006710771.1| RNA binding protein [Staphylococcus aureus 08BA02176]
gi|418310474|ref|ZP_12922014.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21331]
gi|418979340|ref|ZP_13527136.1| Transcription accessory protein (S1 RNA binding domain)
[Staphylococcus aureus subsp. aureus DR10]
gi|283471279|emb|CAQ50490.1| protein YhgF [Staphylococcus aureus subsp. aureus ST398]
gi|365236661|gb|EHM77545.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21331]
gi|379992771|gb|EIA14221.1| Transcription accessory protein (S1 RNA binding domain)
[Staphylococcus aureus subsp. aureus DR10]
gi|384231043|gb|AFH70290.1| Transcription accessory protein (S1 RNA binding domain)
[Staphylococcus aureus subsp. aureus 71193]
gi|404440830|gb|AFR74023.1| putative RNA binding protein [Staphylococcus aureus 08BA02176]
Length = 716
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 145/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + ++ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTAVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|331082804|ref|ZP_08331926.1| hypothetical protein HMPREF0992_00850 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400133|gb|EGG79782.1| hypothetical protein HMPREF0992_00850 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 714
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 123/554 (22%), Positives = 237/554 (42%), Gaps = 100/554 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A+ + LQ++ EK +E + + E+ N K A
Sbjct: 105 RPKRRTRATIAKEKGLEGLAN-------IVLLQMT-EKNIEEEAEAFVSEEKEVKNVKEA 156
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSAIDSFHQFA 327
+ GA + A IS E R +R + M +VS P+ + + ++
Sbjct: 157 --------IAGAMDIVAESISDEADYRIRIREMTMKQGMLVSVAKKPEETTVYEMYYD-- 206
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD---CKEHYLSDGV 384
E+P+ K + L I + E+EK+L V I PE+ + + KE+ + V
Sbjct: 207 -----HEEPVSKVAGHRVLAINRGEKEKILTVKISAPEEDILRYLEKQVITKENENTTPV 261
Query: 385 SKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY 444
K+A ++D+ + P++ +E R+ ++ +A+ + + K L + P
Sbjct: 262 LKAA----------VEDSYRRLIAPAIEREIRNDLTEKAEDGAIKVFKKNLEQLLMQPPI 311
Query: 445 QRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVR 501
+ + W P + ++D +G+V+D V++ T ++
Sbjct: 312 VGQ--------------VVLGWDPAFRTGCKLAVVDVTGKVLDTTVIYPTAPTTPAKIAA 357
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
+++ LK M++ + + L +V S + + ++I ++++E P+ V +
Sbjct: 358 AKET--------LKEMIEK--YNITLFSVGNGTASRESE--QVIVELLKEIPQKVQY--- 402
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
V +E+ +Y S++++++ P + A ++ R LQ+PLA + + G G
Sbjct: 403 ----VITNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLAELVKIDPKSIGVG 458
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ L L+ G++E D N+VG+D+N A + L+++SG+
Sbjct: 459 QYQHDMNQKKLGEALS-----GVVE----DCVNKVGVDLNTA-----SVSLLEYVSGISK 504
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
A ++ G RK+ + LG K F GFLR+R LD
Sbjct: 505 AIAKNIVVYREENGEFKDRKELLKVAKLGPKAFEQCAGFLRIRGGKNP---------LDA 555
Query: 738 TRIHPESYGLAQEL 751
T +HPESY A++
Sbjct: 556 TSVHPESYPAAEKF 569
>gi|326803413|ref|YP_004321231.1| Tex-like protein N-terminal domain-containing protein, partial
[Aerococcus urinae ACS-120-V-Col10a]
gi|326650512|gb|AEA00695.1| Tex-like protein N-terminal domain protein [Aerococcus urinae
ACS-120-V-Col10a]
Length = 716
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 138/612 (22%), Positives = 256/612 (41%), Gaps = 110/612 (17%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST---CPTPD 315
EE A + +S +A L GA + IS R + R +++ D
Sbjct: 140 EEEAEKYINDQVDSVEAALAGAHEILCEWISEVAKYRSHSRQYVWKKGYLASKKRSQAED 199
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
++ FA PL + + Q L I +AE+EK++ V++ + + L + S
Sbjct: 200 EKETYAIYYDFAA-------PLSELKSYQVLAINRAEKEKVVSVSLDIKTEPLIQAIS-- 250
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+D ++K + + E ++D+LD FLLP + R+ ++ A+ + + + L
Sbjct: 251 -----TDLIAKDS-IAVPLLEKAIEDSLDRFLLPQAFRAIRTQVTEAAEDHAIDNFSENL 304
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
N + P + + + W P + +LD +G+V+D T
Sbjct: 305 QNLLMQQPLKDQ--------------VVLGWDPAYRTGCKLAVLDETGQVLDK--TVVYP 348
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
N ++ +K + + +Q ++ +G S S E + +M+++
Sbjct: 349 TPPHNKKEAAAKT-----VTDLIEKYQIGIIAIGNGTASRES-----EEFVAQMIQD--- 395
Query: 555 DVGHEMDELSIVYG--DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
++LS Y ES +Y S I+ + P + + AV++GR LQ+PLA +
Sbjct: 396 ------NQLSCRYTIVSESGASVYSASEIARKEFPDYQVEERSAVSIGRRLQDPLAELVK 449
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ KL +F +E V+ N+VG+++N A
Sbjct: 450 IDPKAIGVGQYQHDVNQTKLNDQLDF--------TVELVV----NRVGVELNTA-----S 492
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
+ L ++GL A ++ G +RKD LG K F A GFLR+
Sbjct: 493 ASLLSHVAGLTKTVAKNIVTYRNENGKFESRKDLHDVPRLGPKAFEQAAGFLRIAEGK-- 550
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLL 785
++LD+T IHPESY + + + + +I+ + D+D H++ +
Sbjct: 551 -------NILDNTGIHPESYAVTEAI---LAADNIDQNTIRDDDI------HLK-----I 589
Query: 786 KTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLA 845
K + ++R +K + RETL I++ L+ +D R+Q P ++ + + L
Sbjct: 590 KNWNINRLC--QKYDIGRETLKDIQKALLVPGRDPRSQVAGPVLRQDVVQL-----EDLK 642
Query: 846 EGRVVQATVRRV 857
G +Q TVR V
Sbjct: 643 PGMALQGTVRNV 654
>gi|258422935|ref|ZP_05685835.1| S1 domain RNA-binding protein [Staphylococcus aureus A9635]
gi|417891517|ref|ZP_12535579.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21200]
gi|418308239|ref|ZP_12919879.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21194]
gi|418889871|ref|ZP_13443999.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1524]
gi|257846959|gb|EEV70973.1| S1 domain RNA-binding protein [Staphylococcus aureus A9635]
gi|341851934|gb|EGS92836.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21200]
gi|365240611|gb|EHM81381.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21194]
gi|377751188|gb|EHT75121.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
CIG1524]
Length = 716
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 270/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTASVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHVDLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|392989389|ref|YP_006487982.1| S1 RNA-binding domain-containing protein [Enterococcus hirae ATCC
9790]
gi|392336809|gb|AFM71091.1| S1 RNA-binding domain-containing protein [Enterococcus hirae ATCC
9790]
Length = 727
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 214/497 (43%), Gaps = 86/497 (17%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRS-IFMDNAVVSTCPTPDGD--SAIDSFHQF 326
++ + VLQGA + A E+S R +VRS + + VS + D + + ++ +
Sbjct: 156 VHTVEEVLQGAHEIIAEEVSDNATYRTWVRSYTYNKGSYVSVVKKKELDEKAVYEMYYDY 215
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSK 386
A +P+ K + L + E+E +L+V +++ E+ + S + +++ S
Sbjct: 216 A-------EPIHKIVSHRILATNRGEKEGILKVGLQVEEEPI---LSYLERQLINNPASP 265
Query: 387 SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQR 446
+ + +D+ F+ P++ +E R+ ++ +A + +G+ L N + P +
Sbjct: 266 ATMFVRNA----YQDSYKRFIQPAIEREVRNELTEKADEQAIAIFGENLRNLLLQPPLKG 321
Query: 447 KDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS 505
K + + P + ++D++G+V+ + SQ R+
Sbjct: 322 K--------------VVLGFDPAYRTGCKLAVVDATGKVLAIEVIYPHKPASQAKREAAG 367
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
++ + +Q +V +G S S + V E + H+ +I
Sbjct: 368 PA-----FVQLINQYQVDMVAIGNGTASRES---------EQFVAEQLKSADHKA-YYAI 412
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR--- 618
V +E+ +Y S I+ + P + + AV++ R LQ+PLA + + G G+
Sbjct: 413 V--NEAGASVYSASDIARKEFPDLQVEERSAVSIARRLQDPLAELVKIDPKAVGVGQYQH 470
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP--LQFISGLG 676
++ +L +F V+ V NQVG+D+N A +P LQ ISGL
Sbjct: 471 DVSQKRLAEQLDF------------VVETVVNQVGVDVNTA-------SPQLLQHISGLN 511
Query: 677 PRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLD 736
A ++ GA TR LG K + A+GF+RV G+ ++LD
Sbjct: 512 KTTAQNIVTYREENGAFETRAQLKKVPRLGPKAYEQAIGFIRV-PGGK--------NILD 562
Query: 737 DTRIHPESYGLAQELAK 753
+T IHPESY +A+E+ K
Sbjct: 563 NTGIHPESYPIAKEILK 579
>gi|225862297|ref|YP_002747675.1| S1 RNA binding domain protein [Bacillus cereus 03BB102]
gi|376264275|ref|YP_005116987.1| Transcription accessory protein (S1 RNA-binding domain) [Bacillus
cereus F837/76]
gi|225787563|gb|ACO27780.1| S1 RNA binding domain protein [Bacillus cereus 03BB102]
gi|364510075|gb|AEW53474.1| Transcription accessory protein (S1 RNA-binding domain) [Bacillus
cereus F837/76]
Length = 722
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 207/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIRDNDSKSAQYVK----LAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIAKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|255034878|ref|YP_003085499.1| RNA binding S1 domain-containing protein [Dyadobacter fermentans
DSM 18053]
gi|254947634|gb|ACT92334.1| RNA binding S1 domain protein [Dyadobacter fermentans DSM 18053]
Length = 705
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 120/528 (22%), Positives = 212/528 (40%), Gaps = 85/528 (16%)
Query: 238 LGLQLSLEKMGDELEDPKET-PEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
+ ++ LE + + + KE PE A++F ++ LQGAR + A I+ R
Sbjct: 113 IAIEKGLEPLAKLIFEGKERDPEGKAASFLNDQVANAADALQGARDIIAEWINENQEART 172
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
+R F AV+++ + + + + +PL K + L +++ EEE +
Sbjct: 173 KIRYTFQKGAVITSKVKKKKEEEGAKYRDY----FEFSEPLAKIPSHRLLALRRGEEEGI 228
Query: 357 LQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV 412
L V I EDS L++LF E DQ EL + D+ L PS+
Sbjct: 229 LSVDISPDEDSALEALDRLFMFGTEA------------CKDQLELAIGDSYKRLLKPSIE 276
Query: 413 KEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KP 471
E +L +A + + + L + P +K VLA PG +
Sbjct: 277 TEFANLSKEKADVAAIQVFSENLRQLLLASPLGQKT------------VLAI--DPGYRT 322
Query: 472 ETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQE-RLLKFMMDHQPHVVVLGAV 530
V+LD G L + +V K D R+ + + H+ + +G
Sbjct: 323 GCKVVVLDGQG-----------NLMADHVIYPFDKPADAAARISELIRKHKVEAIAVG-- 369
Query: 531 NLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQK 590
N + +D + + D + E+ + E +Y S ++ ++ P +
Sbjct: 370 NGTAGRETEDFVKKLL--------DGSEKSSEIGLFMVSEQGASIYSASEVAREEFPDKD 421
Query: 591 GNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMV 646
V+ +V++GR L +PLA + + G G+ L N L + V+
Sbjct: 422 VTVRGSVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNSLRNAL---------DIVVE 472
Query: 647 DVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLG 706
N VG+++N + L+++SGLGP A ++ + G +R+ + LG
Sbjct: 473 SCVNSVGVNLNTSSKH-----LLRYVSGLGPALAQNIVDFRAKNGNFKSRQQLLKVPRLG 527
Query: 707 KKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
K F A GFLR+ LD++ +HPE Y L +++AK+
Sbjct: 528 AKAFEQAAGFLRIENGANP---------LDNSAVHPERYALVEQMAKD 566
>gi|303233848|ref|ZP_07320501.1| Tex-like protein N-terminal domain protein [Finegoldia magna
BVS033A4]
gi|302495043|gb|EFL54796.1| Tex-like protein N-terminal domain protein [Finegoldia magna
BVS033A4]
Length = 697
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 194/880 (22%), Positives = 342/880 (38%), Gaps = 218/880 (24%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +L I D++++ ++LL + IPFIA YRKE +L
Sbjct: 6 KLSEELDIKYDNVVKTVELLD-EGNTIPFIARYRKEITGNL------------------- 45
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQ-QLFD 169
+ L ++D LQ+RK D TRL Q +L +
Sbjct: 46 -----TDETLRQLNDRLTYLRNLQERKD------------------DITRLIDEQGKLTE 82
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
+ K ++ A E++D+ L F +PK+ T+ S + GL VA
Sbjct: 83 DLKKQIDEAAILTELEDIYLPF-----------------KPKKRTRGSIAVELGLQPVAD 125
Query: 230 KFGYSSEQLGLQLSLEKMGDEL---EDPKETPEEMASNFKC-AMFNSSQAVLQGARHMAA 285
E+ L +EK E E+ K + +A + A F S Q V
Sbjct: 126 MI---MEKTHLLAEIEKKASEFINGEEIKTVDDAVAKSLDIIAEFVSEQKVF-------- 174
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAI-DSFHQFAGVKWLREKPLRKFEDAQ 344
R VR+ F+ A++ T + +S ++ F+ + ++ + +
Sbjct: 175 ---------RDIVRNSFVTEAILKTEEKNEDESGTYKMYYDFS-------EKVKDVKAHR 218
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
L I + E+E L+V+ L +D +F + K+ D E +KD+
Sbjct: 219 ILAIFRGEKEGFLKVSFVLNDDY--NIF-----KIMRKIARKNDFETYDLIEKAVKDSYK 271
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
++PS+ E R M K + + S+G ++ +++ P
Sbjct: 272 RLIVPSIETEVRQSM-------------KEMADDESIGVFK---SNLKP----------Y 305
Query: 465 CWGPGKPETTFVMLD---SSGEVVDVL-----FTGCLTLRSQNVRDQQSKKNDQERLLKF 516
P ET + LD +G V V+ F + + R Q + + E L +F
Sbjct: 306 LMQPPIKETAIIGLDPGFRTGCKVAVISEYGDFLDSAVIYVTDARKQIQRAD--ETLKEF 363
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG--DESLPR 574
+ + ++ +G S + E++ D+ ++D+ I Y +E+
Sbjct: 364 IKKYNVKLIAIGNGTAS-------------RETEKYVSDLLAQIDD-EIFYAIVNEAGAS 409
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
+Y S+++ ++ P ++ A+++ R +Q+PLA + + S + ++ +
Sbjct: 410 IYSASKLAIEEFPDLDVTIRGAISIARRIQDPLAELVKISPQ-----SIGVGQYQHDVNQ 464
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+ +E+V+ D N VG++IN A A L ++SG+ A ++ + G
Sbjct: 465 KKLKSSLEEVVEDCVNTVGVNINTA-----SSALLNYVSGITKTTAKNIVDYKIENGPFT 519
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
R++ + G+G K FV GFLR+ S + +LD+T +HPESY +A+++ K
Sbjct: 520 NRQEILKVKGIGPKAFVQCAGFLRIPESEE---------ILDNTEVHPESYEIAKQIMK- 569
Query: 755 VYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELI 814
DLND +D ++ E TL I EL
Sbjct: 570 -------YDLND-----------------------IDVKKLSEELEVGEPTLRDIIEELK 599
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA---ICVLESGLA 871
+D R++ +P ++ I D L EG +V TVR V A I + E GL
Sbjct: 600 KPGRDPRDEMPKPVLRQDVLSI-----DDLEEGMIVTGTVRNVVDFGAFIDIGIKEDGLC 654
Query: 872 GM-LMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNR 909
+ M Y + R+ E+SD + KI I K R
Sbjct: 655 HISKMSNSYIKNPREVCEVSDTVK------VKIIGIDKER 688
>gi|156087833|ref|XP_001611323.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798577|gb|EDO07755.1| conserved hypothetical protein [Babesia bovis]
Length = 1722
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 28/251 (11%)
Query: 596 AVALGRYLQNPLAMVATL-CGPGREILSWKLCPLENFLTPDEKYG-MIEQVMVDVTNQVG 653
V++GR+ +P++ L G +L L EK +E ++ V G
Sbjct: 1106 CVSMGRFYMDPVSETINLWNNKGNNLLLKLSLHPLQHLISQEKLQEYLEATLIQVVCDCG 1165
Query: 654 LDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF----VTAHGLGKKV 709
+DIN + A LQF++GLGPRKA + R L + I TR + GLG V
Sbjct: 1166 VDINRIRTSKHMEATLQFVAGLGPRKAIDVLRQL-KIATIGTRGQLRSGNASLRGLGDLV 1224
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP-ESYGLAQELAKEVYNRDIEGDLNDDE 768
F N F+R+ + ++ +D+LD TR+HP E Y A++L + + ++ G
Sbjct: 1225 FYNCASFIRI-------NQNEAMDILDTTRLHPAECYYTAEKLCTDSVDDELNG------ 1271
Query: 769 DALEMAIEHVRDRPDLLKTYLLDRH--IKEKKRENKRETLYL--IRRELIHGFQDWRNQY 824
E AI+ + + PD L L+ + + +KR R YL ++REL F+D+R
Sbjct: 1272 ---EEAIQEIFNHPDKLDDLDLEAYSGLLLEKRNMPRMLPYLLFVKRELQAPFRDYRATL 1328
Query: 825 KEPSQDEEFYM 835
++ +D+EF +
Sbjct: 1329 QDLKRDQEFCL 1339
>gi|418952097|ref|ZP_13504143.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-160]
gi|375369938|gb|EHS73787.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-160]
Length = 716
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 145/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ + ++
Sbjct: 199 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFIA--RQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++ L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRCYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VAKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|422697005|ref|ZP_16754953.1| S1 RNA binding domain protein [Enterococcus faecalis TX1346]
gi|315174401|gb|EFU18418.1| S1 RNA binding domain protein [Enterococcus faecalis TX1346]
Length = 730
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADEIKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|302379353|ref|ZP_07267840.1| Tex-like protein N-terminal domain protein [Finegoldia magna
ACS-171-V-Col3]
gi|302312698|gb|EFK94692.1| Tex-like protein N-terminal domain protein [Finegoldia magna
ACS-171-V-Col3]
Length = 697
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 193/880 (21%), Positives = 341/880 (38%), Gaps = 218/880 (24%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +L I D++++ ++LL + IPFIA YRKE +L
Sbjct: 6 KLSEELDIKYDNVVKTVELLD-EGNTIPFIARYRKEITGNL------------------- 45
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQ-QLFD 169
+ L ++D LQ+RK D TRL Q +L +
Sbjct: 46 -----TDETLRQLNDRLTYLRNLQERKD------------------DITRLIDEQGKLTE 82
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
+ K ++ A E++D+ L F +PK+ T+ S + GL VA
Sbjct: 83 DLKKQIDEAAILTELEDIYLPF-----------------KPKKRTRGSIAVELGLQPVAD 125
Query: 230 KFGYSSEQLGLQLSLEKMGDEL---EDPKETPEEMASNFKC-AMFNSSQAVLQGARHMAA 285
+ L +EK E E+ K + +A + A F S Q V
Sbjct: 126 MIMEKTHSLA---EIEKKASEFVNGEEIKTVDDAIAKSLDIIAEFVSEQKVF-------- 174
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAI-DSFHQFAGVKWLREKPLRKFEDAQ 344
R VR+ F+ A++ T + +S ++ F+ + ++ + +
Sbjct: 175 ---------RDIVRNSFVTEAILKTEEKNEDESGTYKMYYDFS-------EKVKDVKAHR 218
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
L I + E+E L+V+ L +D +F + K+ D E +KD+
Sbjct: 219 ILAIFRGEKEGFLKVSFVLNDDY--NIF-----KIMRKIARKNDFETYDLIEKAVKDSYK 271
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
++PS+ E R M K + + S+G ++ +++ P
Sbjct: 272 RLIVPSIETEVRQSM-------------KEMADDESIGVFK---SNLKP----------Y 305
Query: 465 CWGPGKPETTFVMLD---SSGEVVDVL-----FTGCLTLRSQNVRDQQSKKNDQERLLKF 516
P ET + LD +G V V+ F + + R Q + + E L +F
Sbjct: 306 LMQPPIKETAIIGLDPGFRTGCKVAVISEYGDFLDSAVIYVTDARKQIQRAD--ETLKEF 363
Query: 517 MMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG--DESLPR 574
+ + ++ +G S + E++ D+ ++D+ I Y +E+
Sbjct: 364 IKKYNVKLIAIGNGTAS-------------RETEKYVSDLLAQIDD-EIFYAIVNEAGAS 409
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
+Y S+++ ++ P ++ A+++ R +Q+PLA + + S + ++ +
Sbjct: 410 IYSASKLAIEEFPDLDVTIRGAISIARRIQDPLAELVKISPQ-----SIGVGQYQHDVNQ 464
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
+ +E+V+ D N VG++IN A A L ++SG+ A ++ + G
Sbjct: 465 KKLKSSLEEVVEDCVNTVGVNINTA-----SSALLNYVSGITKTTAKNIVDYKIENGPFT 519
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
R++ + G+G K FV GFLR+ S + +LD+T +HPESY +A+++ K
Sbjct: 520 NRQEILKVKGIGPKAFVQCAGFLRIPESEE---------ILDNTEVHPESYEIAKQIMK- 569
Query: 755 VYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELI 814
DLND +D ++ E TL I EL
Sbjct: 570 -------YDLND-----------------------IDVKKLSEELEVGEPTLRDIIEELK 599
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA---ICVLESGLA 871
+D R++ +P ++ I D L EG +V TVR V A I + E GL
Sbjct: 600 KPGRDPRDEMPKPVLRQDVLSI-----DDLEEGMIVTGTVRNVVDFGAFIDIGIKEDGLC 654
Query: 872 GM-LMKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNR 909
+ M Y + R+ E+SD + KI I K R
Sbjct: 655 HISKMSNSYIKNPREVCEVSDTVK------VKIIGIDKER 688
>gi|340707286|pdb|2L3T|A Chain A, Solution Structure Of Tandem Sh2 Domain From Spt6
Length = 199
Score = 85.5 bits (210), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
R+I HP + +A L +KE GE +IR SSRG +L +T K+ ++ H DI E
Sbjct: 3 RVINHPYYFPFNGRQAEDYLRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELE 62
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
K++ + +GK L + + DLD+++ Y+ V L M S KF+ G+K +V +
Sbjct: 63 KENP-----LALGKVLIVDNQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVK 117
Query: 1084 LLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
+ P + VY F ++H++PG F L + + N
Sbjct: 118 FIEDYSRVNPNKSVYYFSLNHDNPGWFYLMFKINAN 153
>gi|306831829|ref|ZP_07464985.1| YhgF like protein [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|304426027|gb|EFM29143.1| YhgF like protein [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
Length = 710
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 184/819 (22%), Positives = 326/819 (39%), Gaps = 193/819 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K DL+I I + LDL Q IPFIA YRKE +L +EV
Sbjct: 8 KIAQDLNIKESQIAKVLDLTS-QGNTIPFIARYRKEMTGNL------DEVQ--------- 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI DLDK L RK+ + + + EE+ + L
Sbjct: 52 ---------IKAIIDLDKSMTALADRKATVLA----KIEEQGK-------------LTAE 85
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ K++E AE +V++ L+ P YK KR TK + +AGL+ +A
Sbjct: 86 LKKAIENAEKLADVEE------LYLP----------YKE-KRRTKATIAREAGLFPLA-- 126
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+L LQ K + E A+NF F ++ L GA + S
Sbjct: 127 ------RLILQ------------NKPSLEVEAANFITEGFETADKALAGACEILIEAFSE 168
Query: 291 EPCVRKYV-RSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ +R +V I+ ++++ST D A D F EK + K + + L +
Sbjct: 169 DNKLRSWVYNEIWSYSSIISTVK----DEAADDNKTFQIYYDFSEK-VSKIQGYRILALN 223
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFS---DCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+ E+ +L+V + D + + K Y+ D ++ ++
Sbjct: 224 RGEKLGILKVGFEHNIDKMVRFMGARFKNKNAYIDD---------------VIAGTINKK 268
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
++P+M + S ++ A+ + + + L N + V P + K + +
Sbjct: 269 IVPAMERRVHSELTESAEDGAIELFSENLRNLLLVSPLKGK--------------MVLGF 314
Query: 467 GPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
P + ++D +G+++ + SQ + +QSKK+ L + + + ++
Sbjct: 315 DPAFRTGAKLAVVDQTGKLMTTQVIYPVPPASQ-AKIEQSKKD----LAELIRTYGVEII 369
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+G S S E V + ++S V +ES +Y S ++ +
Sbjct: 370 AIGNGTASRES-------------EAFVAQVLKDFPDVSYVIVNESGASVYSASELARHE 416
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKY 638
P + A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 417 FPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLAENLDF------- 469
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
V+ V NQVG++IN A A L +SGL + ++ + G I +R++
Sbjct: 470 -----VVDTVVNQVGVNINTA-----SPALLAHVSGLNKTISENIVKYRDENGRIASREE 519
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
LG K F A GFLR+ + ++LD+T +HPESY + L KE+
Sbjct: 520 IKEVPRLGAKAFEQAAGFLRIPGAE---------NILDNTGVHPESYKAVERLLKEL--- 567
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
+ D +D+ + ++ V ++T +I + ETL I +L+ +
Sbjct: 568 ----KITDLDDSAKTKLQSVS-----IETMAETINIGQ-------ETLKDIIADLLKPGR 611
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
D R+ ++ P ++ IS L G+ ++ TVR V
Sbjct: 612 DLRDDFEAPVLRQDVLDISD-----LEIGQKLEGTVRNV 645
>gi|29375880|ref|NP_815034.1| S1 RNA-binding domain-containing protein [Enterococcus faecalis
V583]
gi|227518574|ref|ZP_03948623.1| S1 domain RNA-binding protein [Enterococcus faecalis TX0104]
gi|227553102|ref|ZP_03983151.1| S1 domain RNA-binding protein [Enterococcus faecalis HH22]
gi|422715144|ref|ZP_16771867.1| S1 RNA binding domain protein [Enterococcus faecalis TX0309A]
gi|422716126|ref|ZP_16772842.1| S1 RNA binding domain protein [Enterococcus faecalis TX0309B]
gi|424678618|ref|ZP_18115457.1| Tex-like protein [Enterococcus faecalis ERV103]
gi|424682059|ref|ZP_18118843.1| Tex-like protein [Enterococcus faecalis ERV116]
gi|424683321|ref|ZP_18120074.1| Tex-like protein [Enterococcus faecalis ERV129]
gi|424687330|ref|ZP_18123977.1| Tex-like protein [Enterococcus faecalis ERV25]
gi|424691950|ref|ZP_18128464.1| Tex-like protein [Enterococcus faecalis ERV31]
gi|424693087|ref|ZP_18129533.1| Tex-like protein [Enterococcus faecalis ERV37]
gi|424697342|ref|ZP_18133669.1| Tex-like protein [Enterococcus faecalis ERV41]
gi|424700835|ref|ZP_18137018.1| Tex-like protein [Enterococcus faecalis ERV62]
gi|424703476|ref|ZP_18139609.1| Tex-like protein [Enterococcus faecalis ERV63]
gi|424712114|ref|ZP_18144306.1| Tex-like protein [Enterococcus faecalis ERV65]
gi|424718511|ref|ZP_18147760.1| Tex-like protein [Enterococcus faecalis ERV68]
gi|424721387|ref|ZP_18150481.1| Tex-like protein [Enterococcus faecalis ERV72]
gi|424725757|ref|ZP_18154446.1| Tex-like protein [Enterococcus faecalis ERV73]
gi|424730375|ref|ZP_18158972.1| Tex-like protein [Enterococcus faecalis ERV81]
gi|424739525|ref|ZP_18167942.1| Tex-like protein [Enterococcus faecalis ERV85]
gi|424750178|ref|ZP_18178249.1| Tex-like protein [Enterococcus faecalis ERV93]
gi|29343342|gb|AAO81104.1| S1 RNA binding domain protein [Enterococcus faecalis V583]
gi|227073993|gb|EEI11956.1| S1 domain RNA-binding protein [Enterococcus faecalis TX0104]
gi|227177767|gb|EEI58739.1| S1 domain RNA-binding protein [Enterococcus faecalis HH22]
gi|315575631|gb|EFU87822.1| S1 RNA binding domain protein [Enterococcus faecalis TX0309B]
gi|315579927|gb|EFU92118.1| S1 RNA binding domain protein [Enterococcus faecalis TX0309A]
gi|402349907|gb|EJU84824.1| Tex-like protein [Enterococcus faecalis ERV116]
gi|402351596|gb|EJU86480.1| Tex-like protein [Enterococcus faecalis ERV103]
gi|402360980|gb|EJU95572.1| Tex-like protein [Enterococcus faecalis ERV31]
gi|402365010|gb|EJU99440.1| Tex-like protein [Enterococcus faecalis ERV25]
gi|402365353|gb|EJU99774.1| Tex-like protein [Enterococcus faecalis ERV129]
gi|402373260|gb|EJV07343.1| Tex-like protein [Enterococcus faecalis ERV62]
gi|402374987|gb|EJV08988.1| Tex-like protein [Enterococcus faecalis ERV37]
gi|402375892|gb|EJV09862.1| Tex-like protein [Enterococcus faecalis ERV41]
gi|402381463|gb|EJV15167.1| Tex-like protein [Enterococcus faecalis ERV65]
gi|402382066|gb|EJV15759.1| Tex-like protein [Enterococcus faecalis ERV68]
gi|402384351|gb|EJV17903.1| Tex-like protein [Enterococcus faecalis ERV63]
gi|402390577|gb|EJV23912.1| Tex-like protein [Enterococcus faecalis ERV73]
gi|402392057|gb|EJV25335.1| Tex-like protein [Enterococcus faecalis ERV72]
gi|402393468|gb|EJV26694.1| Tex-like protein [Enterococcus faecalis ERV81]
gi|402403151|gb|EJV35842.1| Tex-like protein [Enterococcus faecalis ERV85]
gi|402407141|gb|EJV39680.1| Tex-like protein [Enterococcus faecalis ERV93]
Length = 730
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 177/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRIWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSLAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|297587825|ref|ZP_06946469.1| S1 RNA binding domain protein [Finegoldia magna ATCC 53516]
gi|297574514|gb|EFH93234.1| S1 RNA binding domain protein [Finegoldia magna ATCC 53516]
Length = 697
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 188/881 (21%), Positives = 345/881 (39%), Gaps = 210/881 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +L I D++++ ++LL + IPFIA YRKE +L
Sbjct: 6 KLSEELDIKYDNVVKTVELLD-EGNTIPFIARYRKEITGNL------------------- 45
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQ-QLFD 169
+ L ++D LQ+RK D TRL Q +L +
Sbjct: 46 -----TDETLRQLNDRLTYLRNLQERKD------------------DITRLIDEQGKLTE 82
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
+ K ++ A E++D+ L F +PK+ T+ S + GL VA
Sbjct: 83 DLKKQIDEATILTELEDIYLPF-----------------KPKKRTRGSIAVELGLQPVAD 125
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEIS 289
+ L +EK E + +E + + + + A +S
Sbjct: 126 MIMEKTHSLS---EIEKKASEFVNGEE-------------IKTVDDAISKSLDIIAEFVS 169
Query: 290 CEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ R VR+ F+ + V+ T + DS + + + ++ + + L +
Sbjct: 170 EQKVFRDIVRNSFITDGVMKTEEKNEDDSGTYKMY------YDYSEKVKDVKAHRVLAVF 223
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWN-DQRELILKDALDNFLL 408
+ E+E L+V+ L +D +F ++ ++++ + D E +KD+ ++
Sbjct: 224 RGEKEGFLKVSFLLNDDY--NIFKIMRK------IARANDFESYDLIEKAVKDSYKRLIV 275
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP 468
PS+ E R M K + + S+G ++ +++ P P
Sbjct: 276 PSIETEVRQSM-------------KEMADDESIGVFK---SNLKP----------YLMQP 309
Query: 469 GKPETTFVMLDS---SGEVVDVL-----FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDH 520
ET + LD +G V V+ F + + R Q + + E L F+ +
Sbjct: 310 PIKETAIIGLDPGFRTGCKVAVISEYGDFLDSAVIYVTDARKQIQRAD--ETLKDFIDKY 367
Query: 521 QPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYG--DESLPRLYEN 578
++ +G S + E++ D+ ++D+ I Y +E+ +Y
Sbjct: 368 NVKLIAIGNGTAS-------------RETEKYVSDLLAQIDD-EIFYAIVNEAGASIYSA 413
Query: 579 SRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKY 638
S+++ ++ P ++ A+++ R +Q+PLA + + S + ++ + +
Sbjct: 414 SKLAIEEFPDLDVTIRGAISIARRIQDPLAELVKISPQ-----SIGVGQYQHDVNQKKLK 468
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
+E+V+ D N VG++IN A A L ++SG+ A ++ + G R++
Sbjct: 469 SSLEEVVEDCVNTVGVNINTA-----SSALLNYVSGITKTTAKNIVDYKIENGPFTNRQE 523
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
+ G+G K FV GFLR+ S + +LD+T +HPESY +A+++ K
Sbjct: 524 ILKVKGIGPKAFVQCAGFLRIPESEE---------ILDNTEVHPESYEIAKQIMK----- 569
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
DLND +D ++ E TL I EL +
Sbjct: 570 ---YDLND-----------------------IDVKKLSEELEVGEPTLRDIIEELKKPGR 603
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA---ICVLESGLAGM-L 874
D R++ +P ++ I D L EG +V TVR V A I + E GL +
Sbjct: 604 DPRDEMPKPVLRQDVLSI-----DDLEEGMIVTGTVRNVVDFGAFIDIGIKEDGLCHISK 658
Query: 875 MKEDYSDDWRD-SELSDKLHEGDILTCKIKSIQKNRYQVFL 914
M + Y + R+ E+SD + KI I K+R V L
Sbjct: 659 MSDSYIKNPREVCEVSDTVK------VKIIGIDKDRGLVSL 693
>gi|124808108|ref|XP_001348232.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
gi|23497122|gb|AAN36671.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
Length = 2820
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 16/192 (8%)
Query: 572 LPRLYENSRISSDQLPGQKG-NVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC--PL 628
+P L NS S +L + ++L Y+QNPL +V +L + + K+C L
Sbjct: 2004 IPNLLTNSLKYSKELVDKYTREALMCLSLCHYVQNPLGVVISLFDEDTKSMLIKVCLHDL 2063
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA--PLQFISGLGPRKAASLQRS 686
+N++ + + E+VM+DV N++G DIN ++ + L +I GLG RK L +
Sbjct: 2064 QNYICNYKLQYLFERVMIDVVNKIGCDINFLRKQKKKHLENSLNYICGLGLRKREELMK- 2122
Query: 687 LVRAGAIFTRKDFVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
L+ + TR+D +T +GK V+ N F+R+ +G F++ LD+TRIHP
Sbjct: 2123 LLHNTNLNTREDLLTLSNNKKFIGKCVYRNCSSFIRIISNG-----DDFVEALDNTRIHP 2177
Query: 743 ES-YGLAQELAK 753
+ Y + ++ K
Sbjct: 2178 SNCYDIIYDMLK 2189
>gi|434387911|ref|YP_007098522.1| transcriptional accessory protein [Chamaesiphon minutus PCC 6605]
gi|428018901|gb|AFY94995.1| transcriptional accessory protein [Chamaesiphon minutus PCC 6605]
Length = 772
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 124/560 (22%), Positives = 223/560 (39%), Gaps = 100/560 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVA----SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASN 264
+PKR T+ + + GL +A S S++ L L+ K DE + K E +A
Sbjct: 106 KPKRRTRATIAREKGLEPLAELIRSLNNPSAKPLELEPEAAKYIDEEKGVKTAAEALA-- 163
Query: 265 FKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS-IFMDNAVVSTCP--TPDGDSAID 321
GA + A I+ + +R Y+R I + +S P+G + +
Sbjct: 164 --------------GASDIIAESIADKANLRAYIREYIQSEGQFISKIKDDVPEGSTKFE 209
Query: 322 SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLS 381
+ +++ P+ K L + + E EK+L + ++ ED D ++ +
Sbjct: 210 MYRKYSA-------PVSKVAPHNLLALFRGETEKVLSLDLEFSED-------DIYDYLAT 255
Query: 382 DGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSV 441
+ D + +LKDA + + S+V E R+ +A + + L +
Sbjct: 256 QEIKTKVPAIRDFYQAMLKDAFNRLMKTSLVNEVRAESKLQADIGSISNFETNLRELLLS 315
Query: 442 GPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVR 501
P K P P + C +L +G+ + + +S N R
Sbjct: 316 APAGMK-----PTLAIDPGFRSGC--------KVAVLSETGQFL--AYEAVFPHQSANQR 360
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
Q + Q F+ + ++ +G + T+ ++ +I + + P+ +
Sbjct: 361 QQAANTVKQ-----FIKKYNIQLIAIG----NGTAGRETDQFVIETIADLEPKPIK---- 407
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL------CG 615
V +ES +Y S ++ + P V+ A+++GR LQ+PLA + + G
Sbjct: 408 ----VMVNESGASIYSASEVAISEFPDLDITVRGAISIGRRLQDPLAELVKIDPKSIGVG 463
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
+ + KL ++ + N VG+D+N A +E L F+SGL
Sbjct: 464 QYQHDVDQKLL-----------RKKLDDTVESCVNYVGVDLNTA-SKEL----LTFVSGL 507
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
P A ++ GA RK + LG K F A GFLR+ R G+ + L
Sbjct: 508 TPTIANNIIAYRNENGAFKNRKQLLKVAKLGPKAFEQAAGFLRI-RDGE--------NPL 558
Query: 736 DDTRIHPESYGLAQELAKEV 755
D+T +HPESY + +AK+V
Sbjct: 559 DNTAVHPESYPILAAIAKDV 578
>gi|295107401|emb|CBL04944.1| Transcriptional accessory protein [Gordonibacter pamelaeae
7-10-1-b]
Length = 718
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 136/602 (22%), Positives = 261/602 (43%), Gaps = 114/602 (18%)
Query: 162 ALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSC 219
A+++Q L + +EAAE + V+D+ F + KR+T+ S
Sbjct: 74 AIDEQGKLTPELRAKIEAAEVMQRVEDLYKPF-----------------KKKRATRASKA 116
Query: 220 SKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM--FNSSQAVL 277
AGL E L L + + D+ +P +A+ A F + +A L
Sbjct: 117 RDAGL-----------EPLALLILAQGRSDK------SPLALAAGLVNAEAGFPTPEAAL 159
Query: 278 QGARHMAAVEISCEPCVRKYVRSIFM-DNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP 336
QGA+ + A I+ + + +R+ + A+ P + ++++ F+ +P
Sbjct: 160 QGAQDIVAEVIADDAEHTEALRAFTLRTGALAVEAVDPQEKTVYEAYYDFS-------EP 212
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
L + + + L + + E+E L+ +++ D+ + + + S A + +
Sbjct: 213 LSRIPNHRVLAVNRGEKEGKLRAKVRVDADAA---IEQLERRVVRNPASPFAPVLREA-- 267
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ D + PS+ +E R L++ RA++ + + K + +S P +
Sbjct: 268 --VADGYKRLVAPSLDREMRVLLTERAEADAIKVFAKNTESLLSQRPVR----------- 314
Query: 457 AAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLK 515
RV+A PG + +LD G+++D FT T+ R + K Q++L +
Sbjct: 315 -GARVIAI--DPGYRTGCKVAVLDEYGKLLD--FT---TVYPTPPRSEVRKT--QDKLAE 364
Query: 516 FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRL 575
++ H+ + +V+G N + +S +++ + + R +IV +E+ +
Sbjct: 365 YVERHRANTIVIG--NGTGSSETEEVVADLIAKTDAPLR--------YTIV--NEAGASV 412
Query: 576 YENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENF 631
Y S+++S++ P + A++LGR LQ+PLA + + G G+ L
Sbjct: 413 YSASQLASEEYPDLDVTTRGAMSLGRRLQDPLAELVKIPPQSIGVGQYQHDLNQAELGRA 472
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L G++E+V+ N+VG+D+N A + L ++SG+ A ++ G
Sbjct: 473 LA-----GVVERVV----NRVGVDLNTA-----SASLLGYVSGVNTAVARNIVAYREEHG 518
Query: 692 AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
R++ LG K + N GFLRV +G A + LD T +HPESY +A+EL
Sbjct: 519 RFSDRRELKKVPKLGAKAYQNCAGFLRV--AGGA-------NPLDATSVHPESYPVAREL 569
Query: 752 AK 753
K
Sbjct: 570 LK 571
>gi|315651185|ref|ZP_07904215.1| YhgF like protein [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486481|gb|EFU76833.1| YhgF like protein [Lachnoanaerobaculum saburreum DSM 3986]
Length = 717
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 133/598 (22%), Positives = 249/598 (41%), Gaps = 119/598 (19%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L D + + +EAA T VDD+ F RPKR T+ + GL
Sbjct: 80 KLTDELRRDIEAACTLVAVDDLYRPF-----------------RPKRRTRAMIAVEKGLE 122
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
A+ + EK+ E+E KE + ++ + + A+ GA + A
Sbjct: 123 AFAN-----------DIFEEKL--EIEAIKEAKKYLSDKEGLEVETEADAI-AGAMDIIA 168
Query: 286 VEISCEPCVRKYVRSI-FMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ 344
+IS + R +R + F ++S +S ++++ FA + + K +
Sbjct: 169 EKISDDAGFRNKIREMSFKQGILMSAAKDETTESVYENYYNFA-------ESVSKAAGYK 221
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALD 404
L I + E+EK+L V + P + + + YL + K + +Q ILKD +D
Sbjct: 222 ILAINRGEDEKILTVKVDPPLEDIIR--------YLERNIIKKHNKFTEQ---ILKDTID 270
Query: 405 N----FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPR 460
+ + PS+ ++ RS ++ A+ + +GK L + P +
Sbjct: 271 DAYKRLIAPSIERDIRSSLTEAAEDEAIKIFGKNLTQLLMQPPVTGR------------- 317
Query: 461 VLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
+ W P + ++D +G+V+D T QN + + +KK +E + K+
Sbjct: 318 -VVLGWDPAFRTGCKLAVVDETGKVLDT--TVIYPTAPQN-KVEAAKKVLKELIKKY--- 370
Query: 520 HQPHVVVLGAVNLSCTSLKD-----DIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPR 574
N+S SL + + II ++++E +L + +E+
Sbjct: 371 -----------NISLISLGNGTASRESESIIVELIKEVDT-------KLEYIIVNEAGAS 412
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
+Y S++++++ P + A ++ R L++PLA + + P S + ++ +
Sbjct: 413 VYSASKLATEEFPNFDVGQRSAASIARRLEDPLAELVKI-DPK----SIGVGQYQHDMNQ 467
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFISGLGPRKAASLQRSLVRAGAI 693
+ + V+ D N+VG+D+N A APL ++ISG+ A ++ G+
Sbjct: 468 KKLSEALGAVVEDCVNKVGVDLNTA------SAPLLEYISGISKAVAKNIVVYREENGSF 521
Query: 694 FTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
TRK+ + LG K F GFLR+ + LD T +HPESY ++L
Sbjct: 522 KTRKELLKVSKLGPKAFEQCAGFLRINDGKEP---------LDMTSVHPESYSATKKL 570
>gi|385837301|ref|YP_005874931.1| Transcription accessory protein (S1 RNA-binding domain)
[Lactococcus lactis subsp. cremoris A76]
gi|358748529|gb|AEU39508.1| Transcription accessory protein (S1 RNA-binding domain)
[Lactococcus lactis subsp. cremoris A76]
Length = 713
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 145/680 (21%), Positives = 272/680 (40%), Gaps = 143/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ E + I D D L +R
Sbjct: 31 VPFIARYRKEATGSL--------------DEVE----------IKKIIDEDNLLTKLSER 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+A+ S + EE + L DS+ + AAE EV+D L+ P
Sbjct: 67 KTAVLS----KIEELGK-------------LTDSLKTQILAAEKLTEVED------LYLP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK KR TK + + GL+ +A ++ L
Sbjct: 104 ----------YKE-KRRTKATIAKENGLFPLAQLIVKNAANL------------------ 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A F F ++Q L+GA + + IS + +R ++ +N+++++ D
Sbjct: 135 --EEEAEKFVNENFTTAQKALEGAVDILSEAISEDARLRSWLTGEIKNNSLLTSSLKKD- 191
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
A+D F EK + + + + L + + E+ +L V + ED + + F+
Sbjct: 192 --AVDEKQVFQMYYKFSEK-VSELPNYRVLALNRGEKLGILSVKFENNEDKILRYFA--- 245
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
++ A N ++ +KDA+ L+P+M + R+ ++ +A++ + +GK L
Sbjct: 246 --------ARFAAQNNPMMQVAIKDAVKKKLIPAMERSIRTELTEKAEASAIEVFGKNLK 297
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
N + V P + + + + P + ++D +G++ ++ T +
Sbjct: 298 NLLLVAPLKGR--------------VVMGFDPAYRTGAKLAIVDETGKL--LMTTVIYPV 341
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ N K D L KF+ ++ +++ +G N + + + + K E + D
Sbjct: 342 KPANAGQIAQAKKD---LAKFIREYGVNMIAIG--NGTASRESESFVSEVLK--ENNFSD 394
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
V + V ES +Y S ++ ++ P + A+++ R LQ+PLA + +
Sbjct: 395 VYY-------VIVSESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEP 447
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
+ ++ E LT + +D + ++ + L ++GL
Sbjct: 448 KAIGVGQYQHDVSEKKLTEN----------LDFVVETVVNQVGVNVNTASPSLLSHVAGL 497
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ + GA+ TR + LG K F A GFLR+ + L
Sbjct: 498 NKSLAQNVVKYREENGALKTRNELKKVPRLGAKAFEQAAGFLRIPEGK---------NFL 548
Query: 736 DDTRIHPESYGLAQELAKEV 755
D+T +HPESY + ++L E+
Sbjct: 549 DNTGVHPESYKVTEQLLTEI 568
>gi|150388634|ref|YP_001318683.1| RNA-binding S1 domain-containing protein [Alkaliphilus
metalliredigens QYMF]
gi|149948496|gb|ABR47024.1| RNA binding S1 domain protein [Alkaliphilus metalliredigens QYMF]
Length = 728
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 124/569 (21%), Positives = 266/569 (46%), Gaps = 88/569 (15%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+ KR T+ + + GL +A + +Q LQ ++E + + EE+
Sbjct: 105 KQKRRTRATMAKEKGLEPLAEQI---LKQETLQGTIEALAETF-----INEELE------ 150
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST-CPTPDGDSAIDSFHQFA 327
++ + + GA+ + A IS R+ R++ + +++S+ P+ ++ + ++ +
Sbjct: 151 -VHTIEDAINGAKDIIAEVISDNAQYRERTRNMSLRKSIISSEAVDPEEETVYEKYYDY- 208
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKS 387
++ + K + + L + + E+EK L+V + P++ ++ + K+ + + + +
Sbjct: 209 ------KESVAKIANHRILAVNRGEKEKKLKVKMLSPDE---EIIAYLKDQVIVNTKAVT 259
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
L + ++DA + PS+ +E R++++ RA+ + +GK + + P +
Sbjct: 260 VLLLQET----IEDAYKRLISPSIEREVRNILTERAEEEAIKVFGKNTKPLLLIAPVKN- 314
Query: 448 DNDITPDEEAAPRVLAC--CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS 505
RVLA + G +LD +G+++D +T QN + ++S
Sbjct: 315 -----------VRVLAIDPSFRTG---CKIAVLDETGKLLD--YTTIYPNAPQN-KVEES 357
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
KK +E + ++ ++ P +G + T+ ++ + +V E +++ H++ +I
Sbjct: 358 KKVLKELIEQYNINIIP----IG----NGTASRETEF-----LVAELLKEIDHKV-YYTI 403
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
V E+ +Y S+I++++ P +++ A+++GR LQ+PLA + + P S +
Sbjct: 404 V--SEAGASVYSASKIATEEYPDINVSIRGAISIGRRLQDPLAELVKI-DPK----SIGV 456
Query: 626 CPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQR 685
++ L + ++ V+ D N VG+D+N A A LQ+++G+ A ++
Sbjct: 457 GQYQHDLNQGKLGESLKNVVEDCVNSVGVDLNTATP-----ALLQYVAGISSTVAKNVVE 511
Query: 686 SLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
G RK LG KVF GFLR+ G+ + LD+T +HPESY
Sbjct: 512 YREENGRFQNRKQLKKVKRLGDKVFEQCAGFLRI-DGGE--------NPLDNTAVHPESY 562
Query: 746 GLAQELAKEV-YNR-DIE-GDLNDDEDAL 771
+L +++ Y + DIE G L + E+ +
Sbjct: 563 KTTMKLIEKLGYTKEDIEQGKLRNIEEKV 591
>gi|228995617|ref|ZP_04155283.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus mycoides Rock3-17]
gi|229003244|ref|ZP_04161081.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus mycoides Rock1-4]
gi|228758014|gb|EEM07222.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus mycoides Rock1-4]
gi|228764189|gb|EEM13070.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus mycoides Rock3-17]
Length = 722
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 212/507 (41%), Gaps = 76/507 (14%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P A F A S+Q LQGA+ + A IS R ++R++ ++++
Sbjct: 139 KEDPTGKAKEFVNAEKEVQSAQEALQGAQDIIAELISDNAAYRSWIRNVTFKKGMIASSV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + G E+PL+K + L + + E+E++L+ ++ P + + +
Sbjct: 199 KDEEKDEKNIYEMYYGY----EEPLQKIVPHRVLAMNRGEKEEVLKASVVPPTEEIVRFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
H +S S+SA D +L ++D + PS+ +E R ++ +A+ + +
Sbjct: 255 HKKVIHDVS---SESA----DYVQLAIEDGYKRLIQPSIEREIRKELTEKAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAVVDDTGKVLHIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K +++ + +Q ++ +G S + E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVVSILEKYQVQMIAIGNGTAS-----RETEEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
P+DV + + +E+ +Y S ++ ++ P + + A+++GR LQ+PLA +
Sbjct: 401 VVPQDVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAISIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ + G R + LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVKKREEDGKFTKRTELKGIPRLGAKTYEQCIGFLRILEGKNP- 558
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAK 753
LD T IHPE Y + L K
Sbjct: 559 --------LDRTSIHPEQYKNVELLLK 577
>gi|260587033|ref|ZP_05852946.1| protein YhgF [Blautia hansenii DSM 20583]
gi|260542523|gb|EEX23092.1| protein YhgF [Blautia hansenii DSM 20583]
Length = 714
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 120/554 (21%), Positives = 234/554 (42%), Gaps = 100/554 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A+ + ++ E E ++ K E +A
Sbjct: 105 RPKRRTRATIAKEKGLEGLANIVLLQMTENSIEKEAEAFVSEEKEVKNVKEAIA------ 158
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPDGDSAIDSFHQFA 327
GA + A IS E R +R + M +VS P+ + + ++
Sbjct: 159 ----------GAMDIVAESISDEADYRIRIREMTMKKGMLVSVAKKPEETTVYEMYYD-- 206
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD---CKEHYLSDGV 384
E+P+ K + L I + E+EK+L V I PE+ + + KE+ + V
Sbjct: 207 -----HEEPVSKVAGHRVLAINRGEKEKILTVKISAPEEDILRYLEKQVITKENENTTPV 261
Query: 385 SKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY 444
K+A ++D+ + P++ +E R+ ++ +A+ + + K L + P
Sbjct: 262 LKAA----------VEDSYRRLIAPAIEREIRNDLTEKAEDGAIKVFKKNLEQLLMQPPI 311
Query: 445 QRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD--VLFTGCLTLRSQNVR 501
+ + W P + ++D +G+V+D V++ T ++
Sbjct: 312 VGQ--------------VVLGWDPAFRTGCKLAVVDVTGKVLDTTVIYPTAPTTPAKIAA 357
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
+++ LK M++ + + L +V S + + ++I ++++E P+ V +
Sbjct: 358 AKET--------LKEMIEK--YNITLFSVGNGTASRESE--QVIVELLKEIPQKVQY--- 402
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
V +E+ +Y S++++++ P + A ++ R LQ+PLA + + G G
Sbjct: 403 ----VITNEAGASVYSASKLATEEFPNFDVGQRSAASIARRLQDPLAELVKIDPKSIGVG 458
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ L L+ G++E D N+VG+D+N A + L+++SG+
Sbjct: 459 QYQHDMNQKKLGEALS-----GVVE----DCVNKVGVDLNTA-----SVSLLEYVSGISK 504
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
A ++ G RK+ + LG K F GFLR+ R G+ + LD
Sbjct: 505 AIAKNIVVYREENGEFKDRKELLKVAKLGPKAFEQCAGFLRI-RGGK--------NPLDA 555
Query: 738 TRIHPESYGLAQEL 751
T +HPESY A++
Sbjct: 556 TSVHPESYPAAEKF 569
>gi|418425231|ref|ZP_12998326.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus aureus subsp. aureus VRS1]
gi|387717154|gb|EIK05174.1| competence protein ComEA helix-hairpin-helix repeat region
[Staphylococcus aureus subsp. aureus VRS1]
Length = 712
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 208/497 (41%), Gaps = 71/497 (14%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 135 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 194
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + S+ ++
Sbjct: 195 EKGIFEMY----YAYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTSVEDFI--ARQE 248
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 249 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 302
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 303 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 346
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 347 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 395
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 396 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 450
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 451 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 496
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 497 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 547
Query: 735 LDDTRIHPESYGLAQEL 751
LD+T IHPE+Y + +L
Sbjct: 548 LDNTSIHPENYKVTYQL 564
>gi|229194632|ref|ZP_04321429.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus m1293]
gi|423577906|ref|ZP_17554025.1| hypothetical protein II9_05127 [Bacillus cereus MSX-D12]
gi|228588853|gb|EEK46874.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus m1293]
gi|401203952|gb|EJR10783.1| hypothetical protein II9_05127 [Bacillus cereus MSX-D12]
Length = 722
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 206/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSAV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D +
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKIVPHRVLAMNRGEKEDILRVSVVPPVDEIVTFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 255 Y---KKVIRDNDSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|222094015|ref|YP_002528066.1| transcription accessory protein, s1 RNA-binding domain protein
[Bacillus cereus Q1]
gi|229137084|ref|ZP_04265708.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus BDRD-ST26]
gi|375282345|ref|YP_005102780.1| S1 RNA binding domain-containing protein [Bacillus cereus NC7401]
gi|423357179|ref|ZP_17334778.1| hypothetical protein IAU_05227 [Bacillus cereus IS075]
gi|423572356|ref|ZP_17548563.1| hypothetical protein II7_05556 [Bacillus cereus MSX-A12]
gi|221238064|gb|ACM10774.1| probable transcription accessory protein, S1 RNA-binding domain
protein [Bacillus cereus Q1]
gi|228646391|gb|EEL02601.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus BDRD-ST26]
gi|358350868|dbj|BAL16040.1| S1 RNA binding domain protein [Bacillus cereus NC7401]
gi|401075807|gb|EJP84176.1| hypothetical protein IAU_05227 [Bacillus cereus IS075]
gi|401197723|gb|EJR04651.1| hypothetical protein II7_05556 [Bacillus cereus MSX-A12]
Length = 722
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 211/507 (41%), Gaps = 76/507 (14%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSAV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIRDNGSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 HVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAK 753
LD T IHPE Y + L K
Sbjct: 559 --------LDRTGIHPEQYKNVELLLK 577
>gi|343086055|ref|YP_004775350.1| Tex-like protein [Cyclobacterium marinum DSM 745]
gi|342354589|gb|AEL27119.1| Tex-like protein [Cyclobacterium marinum DSM 745]
Length = 754
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 153/687 (22%), Positives = 263/687 (38%), Gaps = 156/687 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFI+ YRKE SL +EV + A+ D ++ L KR
Sbjct: 34 VPFISRYRKEVTGSL------DEVQ------------------VAAVRDRLQQLRDLDKR 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K A+ K +E+ + L +++ + AAET ++D+ L +
Sbjct: 70 KEAII----KSIDEQGK-------------LTGALADKINAAETMSILEDIYLPY----- 107
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+PKR TK + + GL +A QL E+ +L +
Sbjct: 108 ------------KPKRRTKGTIAKEKGLEPLA------------QLIFEQNSIDL---NK 140
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+ EE S K S L GAR + A I+ + +RK +R +F++ + P
Sbjct: 141 SAEEYLSEEKGVA--SIDEALNGARDIIAEWINEDAEIRKKLRQLFIEEGEFVSKVIPGK 198
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ + + W +P++ + L +++ E+E L + P+D
Sbjct: 199 EEEAIKYKDY--FDW--REPVKTAPSHRVLAMRRGEKELFLMLDTG-PDDL-------TA 246
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
+ V K DQ L +KD L PSM E R +A + + + L
Sbjct: 247 TKIIEKAVVKENNTCADQVRLAVKDGYKRLLKPSMETEVRLYAKKKADEDAIKVFTENLR 306
Query: 437 NKVSVGPYQRKDN-DITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTL 495
+ P K I P +V+ C GP G+ L
Sbjct: 307 QLLLSSPLGEKSVLAIDPGFRTGCKVV--CLGP------------QGQF----------L 342
Query: 496 RSQNVRDQQSKKNDQER--LLKFMM-DHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+++ + + +K E L+K M+ H+ + +G S + E
Sbjct: 343 QNETIFPNEPQKKTMESGALIKHMVATHKIEAIAIGNGTAS-------------RETENF 389
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
+++G D L +V +ES +Y S ++ ++ P V+ A+++GR L +PLA +
Sbjct: 390 VKNIGLPKDVL-VVMVNESGASIYSASDVAREEFPDFDLTVRGAISIGRRLMDPLAELVK 448
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ L+N L + ++ N VG+++N A +
Sbjct: 449 IDAKSIGVGQYQHDVDQTALKNSL---------DDTVMSCVNGVGVEVNTASKQ-----L 494
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L ++SGLGP A ++ G +R D LG+K F A GFLR+R
Sbjct: 495 LTYVSGLGPSLAQNIVAYRNENGPFKSRADIKKVPRLGEKAFEQAAGFLRIRNGKNP--- 551
Query: 729 SQFIDLLDDTRIHPESYGLAQELAKEV 755
LD + +HPE Y L ++AK++
Sbjct: 552 ------LDSSAVHPERYALINKMAKDM 572
>gi|397904524|ref|ZP_10505433.1| Transcription accessory protein (S1 RNA-binding domain)
[Caloramator australicus RC3]
gi|397162444|emb|CCJ32767.1| Transcription accessory protein (S1 RNA-binding domain)
[Caloramator australicus RC3]
Length = 719
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 209/477 (43%), Gaps = 79/477 (16%)
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP 336
+ GA + A EIS RK++R+I ++ T T D S + ++ + ++
Sbjct: 157 ISGALDIIAEEISDNADYRKFIRNITFREGIIITKSTKDETSPYEMYYDY-------KES 209
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
++ + L I + E E+ L V I+ P + K+ + YL + + K + +E
Sbjct: 210 VKSILPHRVLAINRGEREEFLSVKIEAP---VEKILA-----YLEEKIIKRER----DKE 257
Query: 397 LI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
++ +KD+ + PS+ +E R+ ++ +A+ + + + L N + P + K
Sbjct: 258 ILQRAIKDSYQRLIEPSIEREIRNDLTEKAEEQAIRVFAENLRNLLMQPPVKGK------ 311
Query: 454 DEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER 512
+ + PG + ++D +G+++D T + + + SKK +E
Sbjct: 312 --------VVLGFDPGFRTGCKVAVVDETGKLLD---TATVYSTAPQNDIEGSKKIMKEL 360
Query: 513 LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESL 572
+ K H ++ LG S + +++ I ++++E + G + L V E+
Sbjct: 361 IYK----HNVDIISLGN---GTASRESEVF--ISELIKEIKEESGKK---LYYVVVSEAG 408
Query: 573 PRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPL 628
+Y S ++S + P +++ A+++ R LQ+PLA + + G G+ L
Sbjct: 409 ASVYSASELASKEFPDINVSLRGAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKRL 468
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
+ L G++E DV N VG+D+N A + L ++SG+ A ++
Sbjct: 469 DETLK-----GVVE----DVVNNVGVDLNTA-----SVSLLSYVSGINAAIAKNIVEYRE 514
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
+ G R+ + LG+K F GFLR+ S LD+T +HPESY
Sbjct: 515 QNGKFTDRRQLLKVKRLGEKAFEQCAGFLRIPESQNP---------LDNTAVHPESY 562
>gi|327200640|pdb|3PSK|A Chain A, Crystal Structure Of The Spt6 Tandem Sh2 Domain From
Saccharomyces Cerevisiae, Form Native Spt6 (1247-1451)
gi|327200641|pdb|3PSK|B Chain B, Crystal Structure Of The Spt6 Tandem Sh2 Domain From
Saccharomyces Cerevisiae, Form Native Spt6 (1247-1451)
gi|327200642|pdb|3PSK|C Chain C, Crystal Structure Of The Spt6 Tandem Sh2 Domain From
Saccharomyces Cerevisiae, Form Native Spt6 (1247-1451)
gi|327200643|pdb|3PSK|D Chain D, Crystal Structure Of The Spt6 Tandem Sh2 Domain From
Saccharomyces Cerevisiae, Form Native Spt6 (1247-1451)
Length = 211
Score = 85.1 bits (209), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
R+I HP + +A L +KE GE +IR SSRG +L +T K+ ++ H DI E
Sbjct: 12 RVINHPYYFPFNGRQAEDYLRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELE 71
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
K++ + +GK L + + DLD+++ Y+ V L M S KF+ G+K +V +
Sbjct: 72 KENP-----LALGKVLIVDNQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVK 126
Query: 1084 LLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
+ P + VY F ++H++PG F L + + N
Sbjct: 127 FIEDYSRVNPNKSVYYFSLNHDNPGWFYLMFKINAN 162
>gi|343521319|ref|ZP_08758287.1| Tex-like protein N-terminal domain protein [Parvimonas sp. oral
taxon 393 str. F0440]
gi|343396525|gb|EGV09062.1| Tex-like protein N-terminal domain protein [Parvimonas sp. oral
taxon 393 str. F0440]
Length = 697
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 145/698 (20%), Positives = 278/698 (39%), Gaps = 167/698 (23%)
Query: 77 IPFIAMYRKEECLSL----LKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLL 132
IPFIA YRKE +L L++LEQ L + +L+++
Sbjct: 31 IPFIARYRKEVTGNLDDEILRNLEQK---------------------LQYLRNLEQR--- 66
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+E+ R+ DE +L D + + AET +V+D+ L F
Sbjct: 67 ----------------KEDVIRLIDEL-----GELTDELKNEIINAETLSKVEDIYLPF- 104
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
RPK+ T+ + + GL +A L L++ +E
Sbjct: 105 ----------------RPKKRTRATIAKEKGLKPLAD------------LLLDRKLNENN 136
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
++ E ++ + + A GA + A IS + R +R+ N V+ +
Sbjct: 137 FEQKVSEFISEEKEVLTIEEAMA---GALDIIAEMISEDKDFRDILRNDADRNGVLVSEK 193
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLP-EDSLNK- 370
+ ++ D +++F+ + + K + L I + E+EK L+V+IKL E ++ +
Sbjct: 194 GKEENNVYDMYYEFS-------EKISKLPAHRILAINRGEKEKALKVSIKLSDEKNIGEI 246
Query: 371 LFSDCKE------HYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
LF+ C + +L + V D + L P + E R+ + +A
Sbjct: 247 LFALCMDDENFCHKFLKEAVV---------------DGYNRLLFPQIETEIRANLKEKAD 291
Query: 425 SWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGE 483
+ + +GK L + P + + PG + ++ +G
Sbjct: 292 TQSIEVFGKNLKPYIMQSPILDR--------------VVLGIDPGYRTGCKVAVISKTGS 337
Query: 484 VVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYE 543
V+D + + Q+ K +E L K + + ++ +G S + K
Sbjct: 338 VLD-------HVNIYPTKPQEKIKESKEILAKLIKKYDVSLIAIGNGTASRETEK----- 385
Query: 544 IIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYL 603
++ +++ E ++ +L +E+ +Y S++ ++ P V+ A+++ R +
Sbjct: 386 VVVELINELKKE------DLFYSIVNEAGASIYSASKLGQEEFPDLDVTVRGAISIARRI 439
Query: 604 QNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
Q+P+A + + I ++ + LT + V+ D N+VG+D+N A
Sbjct: 440 QDPMAELVKIEPKHIGIGQYQHDVNQKQLTE-----TLSDVIEDCVNKVGVDVNTA---- 490
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
F+ L +ISG+ A +L GA R + G+G K + + GFLR+R
Sbjct: 491 -SFSLLSYISGMTKTMAKNLVSYRDENGAFKNRDEIKKVKGIGPKAYTQSAGFLRIRNGE 549
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIE 761
LD+T +HPESY E+A ++Y +D++
Sbjct: 550 NP---------LDNTAVHPESY----EIAGKLYGKDLD 574
>gi|340618082|ref|YP_004736535.1| transcriptional accessory protein Tex [Zobellia galactanivorans]
gi|339732879|emb|CAZ96254.1| Transcriptional accessory protein Tex [Zobellia galactanivorans]
Length = 707
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 148/684 (21%), Positives = 262/684 (38%), Gaps = 152/684 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFI+ YRKE +L +EV + AI ++ L+KR
Sbjct: 31 VPFISRYRKERTGNL------DEVQ------------------IGAIVQFKAQFEALEKR 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+A+ EE + DE RL + Q D++ +L+ P
Sbjct: 67 KTAVIKAI-----EEQNALTDELRLKIEQ------------------TDELVTLEDLYLP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+K+ KR TK + K GL +A + +L+ +E+ D E
Sbjct: 104 ----------FKK-KRKTKAETARKNGLEPLAKIIMAQNHNDIESAALQYTNNEVADADE 152
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTP 314
L+GARH+ + I+ VR VR+ +A++ T T
Sbjct: 153 A-------------------LEGARHIISEWINERISVRNQVRNQLERSALIVTKVISTK 193
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
+ F + W + L++ + L I +AE E ++V I++ D + +
Sbjct: 194 KDEEKAQKFRDY--FDW--SEALKRCPSHRLLAILRAENEGFIRVKIEIDSDEMLR---- 245
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
+ D + KS Q +L + DA L PS+ E +A + + K
Sbjct: 246 ----RIEDRIIKSNNSCTPQIQLAIADAYKRLLFPSLSNEILKNAKEKADDDAIKVFSKN 301
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTG 491
L + P K R+LA PG + V L + GE+ + ++
Sbjct: 302 LKQLLLGAPLGEK------------RILAI--DPGFRTGCKIVCLSAQGELEHNETIYP- 346
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
Q+K ++ + + + D ++ + +G S +
Sbjct: 347 ---------HPPQNKSSEAIKKISSLCDAYKIEAIAIGNGTASRET-------------- 383
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
EH H + + + E+ +Y S+I+ D+ P V+ A+++GR L +PLA +
Sbjct: 384 EHLVKRIHFKNPMEVFIVSEAGASIYSASKIARDEFPNYDVTVRGAISIGRRLADPLAEL 443
Query: 611 ATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
+ P S + ++ + + ++ V+ N VG++IN A L
Sbjct: 444 VKI-DPK----SIGVGQYQHDVDQGKLQTSLDSVVESCVNSVGVNINTA-----SVPLLS 493
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
++SG+GP+ A ++ GA +R D LG K F FLR++ +
Sbjct: 494 YVSGIGPKLAENIVAYRNENGAFKSRTDIKKVARLGGKAFEQGAAFLRIKDAKNP----- 548
Query: 731 FIDLLDDTRIHPESYGLAQELAKE 754
LDD+ +HPESY + Q++AK+
Sbjct: 549 ----LDDSAVHPESYTIVQKIAKD 568
>gi|423376160|ref|ZP_17353474.1| hypothetical protein IC5_05190 [Bacillus cereus AND1407]
gi|401089151|gb|EJP97323.1| hypothetical protein IC5_05190 [Bacillus cereus AND1407]
Length = 722
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 211/507 (41%), Gaps = 76/507 (14%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSAV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIHDNGSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 HVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAK 753
LD T IHPE Y + L K
Sbjct: 559 --------LDRTGIHPEQYKNVELLLK 577
>gi|312880474|ref|ZP_07740274.1| Tex-like protein [Aminomonas paucivorans DSM 12260]
gi|310783765|gb|EFQ24163.1| Tex-like protein [Aminomonas paucivorans DSM 12260]
Length = 715
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 148/689 (21%), Positives = 262/689 (38%), Gaps = 144/689 (20%)
Query: 70 LHLQKLDIPFIAMYRKE--ECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
L Q IPFIA YRKE +CL +EV L + D
Sbjct: 26 LFSQGCTIPFIARYRKEATDCL--------DEV------------------ALATVRDRL 59
Query: 128 KKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDV 187
++ L KR+ A+ + ++R L + + +LE A ++ ++D+
Sbjct: 60 EQMEELDKRREAVLASLEER-----------------GLLTEDLKAALEGAASKARLEDL 102
Query: 188 DLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 247
L F RPKR T+ + GL +A + ++
Sbjct: 103 YLPF-----------------RPKRRTRALIAQERGLAPLADRLLEAAS----------- 134
Query: 248 GDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV 307
G DP E +A + L GAR + A + P R +R +F+
Sbjct: 135 GGRPFDPGEAEAFVAPEKGVP---DREEALAGARDIVAERAAENPKARGILRGLFVRRGE 191
Query: 308 VSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS 367
V + + + + W +P R + L + + E+E +L ++ + P++
Sbjct: 192 VRSRVAKGKEEEGAKYRDY--FDW--TEPARSAPPHRILALLRGEKEGVLSLSFRPPQEE 247
Query: 368 LNKLFSDCKEHYLSDGVSKSAQ-LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSW 426
++ +G+ +A DQ +D D PSM E R+++
Sbjct: 248 GQRVL---------EGLFVAAPGAGADQVRAACRDGYDRLAAPSMETELRNVL------- 291
Query: 427 LLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVD 486
KAL ++ SV + R ++ D R + + LD G +
Sbjct: 292 ------KALADRKSVEVFARNVREVLLDSPLGQRAVLAVDPGVRTGCKLTCLDPQGRL-- 343
Query: 487 VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
L + + L + R++ + R ++ ++ P V +D + E+
Sbjct: 344 -LASEVVYLHTPRGREEGA------RTIRDLLRRHPAEAVAVGNGTGGREAEDFLRELDL 396
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
G+ + +V E +Y S + ++ P Q V+ +V++GR LQ+P
Sbjct: 397 P---------GNPV----VVSVSEQGASVYSASEAAREEFPDQDVTVRGSVSIGRRLQDP 443
Query: 607 LAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
LA + + + S + ++ + P ++ V+V N VG+++N A R+
Sbjct: 444 LAELVKI-----DPKSLGVGQYQHDVDPKLLRQSLDDVVVSCVNAVGVEVNSA-SRQL-- 495
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
L ++SGL P AA + +G TR+D LG K F A GFLR+R G A
Sbjct: 496 --LSYVSGLSPALAAQVVAFREASGPFRTRQDLKKVPRLGPKAFQQAAGFLRIR--GGA- 550
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEV 755
D LD + +HPE Y L +A+++
Sbjct: 551 ------DPLDGSAVHPEHYPLVDRMARDL 573
>gi|257437093|ref|ZP_05613133.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus M876]
gi|282914908|ref|ZP_06322688.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
M899]
gi|257283486|gb|EEV13613.1| S1 RNA-binding domain-containing protein [Staphylococcus aureus
subsp. aureus M876]
gi|282321111|gb|EFB51442.1| S1 RNA binding domain protein [Staphylococcus aureus subsp. aureus
M899]
Length = 716
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 145/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V++T + +
Sbjct: 139 EEKAQQFINEEVQSVENAIRGAQDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P++ + + L + + E+EK+L V + ++ + ++
Sbjct: 199 EKGIFEMY----YAYSEPIKCIANHRVLAVNRGEKEKVLSVKFEFDTTAVEDFIA--RQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VAKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETE--QFVADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIHSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|254756962|ref|ZP_05208990.1| S1 RNA binding domain protein [Bacillus anthracis str. Australia
94]
Length = 722
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 207/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIRDNDSKSAQYVK----LAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETTVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|149371071|ref|ZP_01890666.1| putative RNA binding protein with S1 RNA-binding domain
[unidentified eubacterium SCB49]
gi|149355857|gb|EDM44415.1| putative RNA binding protein with S1 RNA-binding domain
[unidentified eubacterium SCB49]
Length = 705
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 203/503 (40%), Gaps = 77/503 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTPDG 316
E +A + S+ L+GAR++ A I+ +R +R +AV+ST
Sbjct: 134 EGLALRYITQKVTSADEALEGARYIIAEWINERVDIRNNIRRELERHAVISTKVVKAKKD 193
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
D F + W ++ L++ + L I +AE E ++V I++ ++ +
Sbjct: 194 DEKAQKFRDY--FSW--DESLKRCPSHRLLAILRAENEGFIRVKIEIEKERV-------- 241
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
++ + KS DQ EL + DA L P++ E S +A + + K L
Sbjct: 242 LDRIARKLIKSQGDCADQIELAIADAYKRLLFPALSNEIMSAAKKKADETAISIFAKNLK 301
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
+ P K R+LA PG + V LD G L
Sbjct: 302 QLLLGSPLGEK------------RILAI--DPGFRTGCKVVCLDEQGAF----------L 337
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ + K +D + Q + + A+ S + + +V++ P
Sbjct: 338 HNSTIYPHPPKSDDTGAMNTIAHLVQKYKIEAIAIGNGTASRETE------AVVKKIPFK 391
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL-- 613
E+ +S E+ +Y S+I+ D+ P V+ A+++GR L +PLA + +
Sbjct: 392 TAVEVFIVS-----EAGASIYSASKIARDEFPDYDVTVRGAISIGRRLADPLAELVKIDA 446
Query: 614 --CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
G G+ L+N L ++V+ + N VG++IN A L +
Sbjct: 447 KSIGVGQYQHDVDQTQLKNSL---------DRVVENCVNAVGVNINTA-----SVPLLSY 492
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+SG+GP+ A ++ GA +R D LG K F GFLR+R +
Sbjct: 493 VSGIGPKLAENIVTYREANGAFTSRNDIKKVPRLGAKAFEQGAGFLRIRDAKNP------ 546
Query: 732 IDLLDDTRIHPESYGLAQELAKE 754
LD++ +HPE Y L +++AK+
Sbjct: 547 ---LDNSSVHPERYALVKQMAKD 566
>gi|228983501|ref|ZP_04143711.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228776245|gb|EEM24601.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 722
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 206/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCA--MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKKVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSAV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D +
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVDEIVTFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 255 Y---KKVIRDNDSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|225571633|ref|ZP_03780629.1| hypothetical protein CLOHYLEM_07731 [Clostridium hylemonae DSM
15053]
gi|225159710|gb|EEG72329.1| hypothetical protein CLOHYLEM_07731 [Clostridium hylemonae DSM
15053]
Length = 718
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 155/685 (22%), Positives = 272/685 (39%), Gaps = 150/685 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE +L D EQ FER L+ L +K+
Sbjct: 31 IPFIARYRKEVTGTL--DDEQL------RRLFERLTYLRS---------------LEEKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L S EE ++ DE R + + AAET V+D L+ P
Sbjct: 68 EQVLSSI------EEQGKLTDELR------------RQILAAETLVVVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A M +LE P E
Sbjct: 104 -----------YRPKRRTRATIAKEKGLEPLADLI---------------MLQKLEGPLE 137
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPTPD 315
+ + + +AV GA+ + A IS E R ++R + F +VS
Sbjct: 138 EEAALYVDVEKGAGTVKEAV-DGAKDIIAERISDEADYRIWIRKLTFQKGRIVSAAKDEK 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + ++ F E+P+ + + L + + E+EK L V ++ PE+ + +
Sbjct: 197 AESVYEMYYDF-------EEPVGRLAGHRVLALNRGEKEKFLTVKVEAPEEEIIRYLE-- 247
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
K+ +SD +A + + E D+ + P++ +E R+ ++ RA+ + +GK L
Sbjct: 248 KKTIVSDN-PYTAPVIKETVE----DSYRRLIAPAIEREIRNDLTERAEDGAIQVFGKNL 302
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLT 494
+ P + W P + ++D +G+V+ G
Sbjct: 303 EQLLMQPPIVGRT--------------VLGWDPAFRTGCKLAVVDPTGKVI-----GTTV 343
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
+ Q + ++ L K + + ++ LG S S ++I ++++E P
Sbjct: 344 IYPTAPTTPQKIQAAKDLLKKIIKKYNISLISLGNGTASRES-----EQVIVELLKEIPE 398
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
V + V +E+ +Y S+++S++ P + A ++ R LQ+PLA + +
Sbjct: 399 KVQY-------VIVNEAGASVYSASKLASEEFPKFDVGQRSATSIARRLQDPLAELVKID 451
Query: 614 ---CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL- 669
G G+ L L+ G++E + N+VG+D+N A APL
Sbjct: 452 PKSIGVGQYQHDMNQKKLSETLS-----GVVEGCV----NKVGVDLNTA------SAPLL 496
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
+ISG+ A ++ G +R + LG K + GF+R++
Sbjct: 497 SYISGITGTIARNIVTYREENGKFTSRTQLLKVAKLGPKAYEQCAGFMRIQNGDNP---- 552
Query: 730 QFIDLLDDTRIHPESYGLAQELAKE 754
LD T +HPESY A++L K+
Sbjct: 553 -----LDGTSVHPESYEAAEKLLKK 572
>gi|206977103|ref|ZP_03238003.1| S1 RNA binding domain protein [Bacillus cereus H3081.97]
gi|217957815|ref|YP_002336359.1| S1 RNA binding domain-containing protein [Bacillus cereus AH187]
gi|206744752|gb|EDZ56159.1| S1 RNA binding domain protein [Bacillus cereus H3081.97]
gi|217064993|gb|ACJ79243.1| S1 RNA binding domain protein [Bacillus cereus AH187]
Length = 724
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 211/507 (41%), Gaps = 76/507 (14%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 141 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSAV 200
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 201 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 253
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 254 TFLYKKVIRDNGSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 309
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 310 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 356
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 357 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 402
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 403 HVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 455
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 456 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 501
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 502 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 560
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAK 753
LD T IHPE Y + L K
Sbjct: 561 --------LDRTGIHPEQYKNVELLLK 579
>gi|47567492|ref|ZP_00238204.1| S1 RNA binding domain protein [Bacillus cereus G9241]
gi|47555894|gb|EAL14233.1| S1 RNA binding domain protein [Bacillus cereus G9241]
Length = 722
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 206/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCA--MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINADKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSAV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D +
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVDEIVTFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 255 Y---KKVIRDNDSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGTKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|429750412|ref|ZP_19283461.1| Tex-like protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429165239|gb|EKY07306.1| Tex-like protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 707
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 114/504 (22%), Positives = 212/504 (42%), Gaps = 77/504 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD--G 316
E +A+ + + + LQGA + A I+ VR+ +R IF A V T D
Sbjct: 136 ELLAAKYLSDKVTTEEEALQGASDIIAEWINENTYVRRSLRRIFQRKAAVITEVQKDKAN 195
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDC 375
+ + Q+ +W ++PL K + L + +AE+E +++ +++ PED+L
Sbjct: 196 EEEAQKYEQY--FQW--DEPLSKAPSHRLLAMLRAEKEGFIKMKVQVAPEDTL------- 244
Query: 376 KEHYLSDGVSKS-AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
++ D + KS + N R+ I KD+ L PS+ E +A + + +
Sbjct: 245 --PFIEDNLIKSEGETANFLRKTI-KDSYKRLLEPSIANEILQEAKNKADEKAISVFSEN 301
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTG 491
L + P K R+LA PG + V LD G+++ DV++
Sbjct: 302 LSQLLLASPLGEK------------RILAI--DPGYRTGCKVVCLDEKGDLLQHDVIYPH 347
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
QQ+ ++L + H + +G S + E
Sbjct: 348 P---------PQQNTAEAAKKLQTMVSKHAIEAISIGNGTAS-------------RETES 385
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
+++ + + E+ +Y S+I+ D+ P V+ AV++GR L +PLA +
Sbjct: 386 FVKNIRFAT-PIDVFVVSEAGASVYSASKIARDEFPDYDVTVRGAVSIGRRLADPLAELV 444
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+ P + + L DE ++ ++ N+VG+++N A + L +
Sbjct: 445 KI-DPKSIGVGQYQHDVNQSLLKDE----LDATVIRCVNKVGVNLNTASK-----SLLSY 494
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+SG+G + A ++ GA R++ LG KV+ AV FLRV
Sbjct: 495 VSGIGEKMAENIVNYRSTNGAFNKREELKKVPRLGDKVYQQAVAFLRVHNPKNP------ 548
Query: 732 IDLLDDTRIHPESYGLAQELAKEV 755
LD++ +HPE+Y + +++AK++
Sbjct: 549 ---LDNSAVHPEAYPIVKQMAKDI 569
>gi|165871608|ref|ZP_02216254.1| S1 RNA binding domain protein [Bacillus anthracis str. A0488]
gi|167634251|ref|ZP_02392573.1| S1 RNA binding domain protein [Bacillus anthracis str. A0442]
gi|167640274|ref|ZP_02398539.1| S1 RNA binding domain protein [Bacillus anthracis str. A0193]
gi|170687714|ref|ZP_02878929.1| S1 RNA binding domain protein [Bacillus anthracis str. A0465]
gi|177653364|ref|ZP_02935574.1| S1 RNA binding domain protein [Bacillus anthracis str. A0174]
gi|190567361|ref|ZP_03020275.1| S1 RNA binding domain protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|196036044|ref|ZP_03103445.1| S1 RNA binding domain protein [Bacillus cereus W]
gi|196046180|ref|ZP_03113407.1| S1 RNA binding domain protein [Bacillus cereus 03BB108]
gi|218901448|ref|YP_002449282.1| S1 RNA binding domain-containing protein [Bacillus cereus AH820]
gi|227812923|ref|YP_002812932.1| S1 RNA binding domain-containing protein [Bacillus anthracis str.
CDC 684]
gi|228925501|ref|ZP_04088594.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228944053|ref|ZP_04106436.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229119911|ref|ZP_04249169.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus 95/8201]
gi|229182642|ref|ZP_04309887.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus BGSC 6E1]
gi|254686597|ref|ZP_05150456.1| S1 RNA binding domain protein [Bacillus anthracis str. CNEVA-9066]
gi|254723563|ref|ZP_05185350.1| S1 RNA binding domain protein [Bacillus anthracis str. A1055]
gi|254734925|ref|ZP_05192637.1| S1 RNA binding domain protein [Bacillus anthracis str. Western
North America USA6153]
gi|254739710|ref|ZP_05197403.1| S1 RNA binding domain protein [Bacillus anthracis str. Kruger B]
gi|254754919|ref|ZP_05206954.1| S1 RNA binding domain protein [Bacillus anthracis str. Vollum]
gi|386734115|ref|YP_006207296.1| Transcription accessory protein, S1 RNA-binding domain protein
[Bacillus anthracis str. H9401]
gi|421641048|ref|ZP_16081612.1| transcription accessory protein [Bacillus anthracis str. BF1]
gi|164712712|gb|EDR18243.1| S1 RNA binding domain protein [Bacillus anthracis str. A0488]
gi|167511676|gb|EDR87057.1| S1 RNA binding domain protein [Bacillus anthracis str. A0193]
gi|167530565|gb|EDR93280.1| S1 RNA binding domain protein [Bacillus anthracis str. A0442]
gi|170668241|gb|EDT18989.1| S1 RNA binding domain protein [Bacillus anthracis str. A0465]
gi|172081404|gb|EDT66477.1| S1 RNA binding domain protein [Bacillus anthracis str. A0174]
gi|190561488|gb|EDV15459.1| S1 RNA binding domain protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|195991413|gb|EDX55380.1| S1 RNA binding domain protein [Bacillus cereus W]
gi|196022925|gb|EDX61605.1| S1 RNA binding domain protein [Bacillus cereus 03BB108]
gi|218538623|gb|ACK91021.1| S1 RNA binding domain protein [Bacillus cereus AH820]
gi|227002952|gb|ACP12695.1| S1 RNA binding domain protein [Bacillus anthracis str. CDC 684]
gi|228600837|gb|EEK58412.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus BGSC 6E1]
gi|228663549|gb|EEL19131.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus 95/8201]
gi|228815627|gb|EEM61865.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228834163|gb|EEM79707.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|384383967|gb|AFH81628.1| Transcription accessory protein, S1 RNA-binding domain protein
[Bacillus anthracis str. H9401]
gi|403391833|gb|EJY89105.1| transcription accessory protein [Bacillus anthracis str. BF1]
Length = 722
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 207/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIRDNDSKSAQYVK----LAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|30260431|ref|NP_842808.1| S1 RNA-binding domain-containing protein [Bacillus anthracis str.
Ames]
gi|47525512|ref|YP_016861.1| s1 RNA-binding domain-containing protein [Bacillus anthracis str.
'Ames Ancestor']
gi|65317683|ref|ZP_00390642.1| COG2183: Transcriptional accessory protein [Bacillus anthracis str.
A2012]
gi|229604808|ref|YP_002864882.1| S1 RNA binding domain protein [Bacillus anthracis str. A0248]
gi|30253752|gb|AAP24294.1| S1 RNA binding domain protein [Bacillus anthracis str. Ames]
gi|47500660|gb|AAT29336.1| S1 RNA binding domain protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|229269216|gb|ACQ50853.1| S1 RNA binding domain protein [Bacillus anthracis str. A0248]
Length = 722
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 205/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D +
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVDEIVTFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSAQ L ++D + S+ +E R ++ A+ + +
Sbjct: 255 Y---KKVIRDNDSKSAQYVK----LAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|49183274|ref|YP_026526.1| S1 RNA-binding domain-containing protein [Bacillus anthracis str.
Sterne]
gi|49476750|ref|YP_034582.1| transcription accessory protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118476003|ref|YP_893154.1| transcription accessory protein [Bacillus thuringiensis str. Al
Hakam]
gi|170707864|ref|ZP_02898314.1| S1 RNA binding domain protein [Bacillus anthracis str. A0389]
gi|196041079|ref|ZP_03108375.1| S1 RNA binding domain protein [Bacillus cereus NVH0597-99]
gi|49177201|gb|AAT52577.1| S1 RNA binding domain protein [Bacillus anthracis str. Sterne]
gi|49328306|gb|AAT58952.1| probable transcription accessory protein, S1 RNA-binding domain
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|118415228|gb|ABK83647.1| transcription accessory protein, S1 RNA-binding domain protein
[Bacillus thuringiensis str. Al Hakam]
gi|170127222|gb|EDS96099.1| S1 RNA binding domain protein [Bacillus anthracis str. A0389]
gi|196028014|gb|EDX66625.1| S1 RNA binding domain protein [Bacillus cereus NVH0597-99]
Length = 724
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 207/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 141 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 200
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 201 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 253
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ L ++D + S+ +E R ++ A+ + +
Sbjct: 254 TFLYKKVIRDNDSKSAQYVK----LAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 309
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 310 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 356
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 357 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 402
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 403 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 455
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 456 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 501
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 502 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 560
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 561 --------LDRTGIHPEQY 571
>gi|52144985|ref|YP_081844.1| transcription accessory protein [Bacillus cereus E33L]
gi|51978454|gb|AAU20004.1| probable transcription accessory protein, S1 RNA-binding domain
[Bacillus cereus E33L]
Length = 724
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 207/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 141 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 200
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 201 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 253
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ L ++D + S+ +E R ++ A+ + +
Sbjct: 254 TFLYKKVIRDNDSKSAQYVK----LAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 309
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 310 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 356
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 357 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 402
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 403 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 455
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 456 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 501
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 502 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 560
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 561 --------LDRTGIHPEQY 571
>gi|325286632|ref|YP_004262422.1| Tex-like protein [Cellulophaga lytica DSM 7489]
gi|324322086|gb|ADY29551.1| Tex-like protein [Cellulophaga lytica DSM 7489]
Length = 707
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 119/550 (21%), Positives = 225/550 (40%), Gaps = 90/550 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+ KR TK + K GL +A ++ + + DE+E AS +
Sbjct: 103 KKKRKTKAETAIKNGLEPLA------------KIIMAQRNDEIE-------YTASRYLND 143
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTPDGDSAIDSFHQF 326
+ + L+GARH+ + I+ +R +R + A+++T T D F +
Sbjct: 144 VIVNEDLALEGARHIISEWINERTDIRNGIRHQLENYALITTKVIGTKKEDEKAQKFRDY 203
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPED-SLNKLFSDCKEHYLSDGVS 385
W + L++ + L I +AE+E ++V I++ D +L+K+ +
Sbjct: 204 --FDW--SEALKRCPSHRLLAILRAEKEGFIRVKIEIDNDRALDKI---------ETRII 250
Query: 386 KSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ 445
KS Q EL ++DA LLPS+ E +A + + + K L + P
Sbjct: 251 KSNNACAQQIELAIQDAYKRLLLPSLSNELLKNAKEKADADAIAVFSKNLKQLLLGSPLG 310
Query: 446 RKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQ 504
K R+LA PG + V LD+ G++ L ++ +
Sbjct: 311 EK------------RILA--LDPGFRTGCKLVCLDAQGDL----------LHNETIYPHA 346
Query: 505 SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
+ E + K + + A+ + + + +++ ++ ++P L
Sbjct: 347 PQNKSTEAIKK--ISSLADAYKIEAIAIGNGTASRETEQLVKRIQFKNP---------LE 395
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
+ E+ +Y S+I+ D+ P V+ AV++GR L +PLA + + S
Sbjct: 396 VFVVSEAGASIYSASKIARDEFPNYDVTVRGAVSIGRRLADPLAELVKIDAK-----SIG 450
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+ ++ + + ++ V+ N VG++IN A + L ++SG+GP+ A ++
Sbjct: 451 VGQYQHDVDQSKLKQSLDTVVESCVNAVGVNINTA-----STSLLSYVSGIGPKLAENIV 505
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
GA +R LG K F FLR++ + LDD+ +HPES
Sbjct: 506 NYRNENGAFTSRTAIKKVPRLGGKAFEQGAAFLRIKNAKNP---------LDDSAVHPES 556
Query: 745 YGLAQELAKE 754
Y + Q++ K+
Sbjct: 557 YSIVQQITKD 566
>gi|288905732|ref|YP_003430954.1| S1 RNA binding domain-containing protein [Streptococcus
gallolyticus UCN34]
gi|325978764|ref|YP_004288480.1| RNA binding S1 domain-containing protein [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|386338183|ref|YP_006034352.1| transcriptional accessory factor [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288732458|emb|CBI14030.1| putative S1 RNA binding domain protein [Streptococcus gallolyticus
UCN34]
gi|325178692|emb|CBZ48736.1| RNA binding S1 domain protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334280819|dbj|BAK28393.1| prokaryotic transcriptional accessory factor [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
Length = 710
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 184/819 (22%), Positives = 325/819 (39%), Gaps = 193/819 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K DL+I I + LDL Q IPFIA YRKE +L +EV
Sbjct: 8 KIAQDLNIKESQIAKVLDLTS-QGNTIPFIARYRKEMTGNL------DEVQ--------- 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI DLDK L RK+ + + + EE+ + L
Sbjct: 52 ---------IKAIIDLDKSMTALADRKATVLA----KIEEQGK-------------LTAE 85
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ K++E AE +V++ L+ P YK KR TK + +AGL+ +A
Sbjct: 86 LKKAIENAEKLADVEE------LYLP----------YKE-KRRTKATIAREAGLFPLA-- 126
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+L LQ K + E A+NF F ++ L GA + S
Sbjct: 127 ------RLILQ------------NKPSLEVEAANFITEGFETADKALAGACEILIEAFSE 168
Query: 291 EPCVRKYV-RSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ +R +V I+ ++++ST D A D F EK + K + + L +
Sbjct: 169 DNKLRSWVYNEIWSYSSIISTVK----DEAADDNKTFQIYYDFSEK-VSKIQGYRILALN 223
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFS---DCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+ E+ +L+V + D + + K Y+ D ++ +
Sbjct: 224 RGEKLGILKVGFEHNIDKMVRFMGARFKNKNAYIDD---------------VIAGTIKKK 268
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
++P+M + S ++ A+ + + + L N + V P + K + +
Sbjct: 269 IVPAMERRVHSELTESAEDGAIELFSENLRNLLLVSPLKGK--------------MVLGF 314
Query: 467 GPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
P + ++D +G+++ + SQ + +QSKK+ L + + + ++
Sbjct: 315 DPAFRTGAKLAVVDQTGKLMTTQVIYPVPPASQ-AKIEQSKKD----LAELIRTYGVEII 369
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+G S S E V + ++S V +ES +Y S ++ +
Sbjct: 370 AIGNGTASRES-------------EAFVAQVLKDFPDVSYVIVNESGASVYSASELARHE 416
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKY 638
P + A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 417 FPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLAENLDF------- 469
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
V+ V NQVG++IN A A L +SGL + ++ + G I +R++
Sbjct: 470 -----VVDTVVNQVGVNINTA-----SPALLAHVSGLNKTISENIVKYRDENGRIASREE 519
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
LG K F A GFLR+ + ++LD+T +HPESY + L KE+
Sbjct: 520 IKEVPRLGAKAFEQAAGFLRIPGAE---------NILDNTGVHPESYKAVERLLKEL--- 567
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
+ D +D+ + ++ V ++T +I + ETL I +L+ +
Sbjct: 568 ----KITDLDDSAKTKLQSVS-----IETMAETINIGQ-------ETLKDIIADLLKPGR 611
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
D R+ ++ P ++ IS L G+ ++ TVR V
Sbjct: 612 DLRDDFEAPVLRQDVLDISD-----LEIGQKLEGTVRNV 645
>gi|374263688|ref|ZP_09622235.1| transcription accessory protein [Legionella drancourtii LLAP12]
gi|363535810|gb|EHL29257.1| transcription accessory protein [Legionella drancourtii LLAP12]
Length = 780
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 192/891 (21%), Positives = 341/891 (38%), Gaps = 216/891 (24%)
Query: 53 GHDLSI---SRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE 109
H+L I + +R LD + +PFIA YRKE L DD +
Sbjct: 13 AHELKIKVAQAETTIRLLD----EGATVPFIARYRKEATEGL--------------DDVQ 54
Query: 110 RTPTLKW-HKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF 168
L++ + L + +LD ++R LQS ++ ++L
Sbjct: 55 ----LRFLAERLLYLRELD------ERRAVVLQSICEQ------------------EKLT 86
Query: 169 DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVA 228
+ KS+ AA+T+ ++D+ L F RPKR TK +AGL +A
Sbjct: 87 PELEKSILAADTKTRLEDLYLPF-----------------RPKRRTKAQIAVEAGLEPLA 129
Query: 229 SKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM--FNSSQAVLQGARHMAAV 286
+DP P+ A F A + ++A L GARH+
Sbjct: 130 QAIW-------------------QDPTLDPDVYALQFINAEMGIDDAKAALDGARHILME 170
Query: 287 EISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWL 346
+ + + +R +AVV + + ++ F + + + ++K + L
Sbjct: 171 HFAEDADLINELREYLWQHAVVKSVGSSKKKETVNKFSDY----FDYSEAIKKIPSHRAL 226
Query: 347 LIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+ + E +LQV++ L E L+ Y D ++ + + QR A D +
Sbjct: 227 ALFRGRRESVLQVSLTLQEHDLS---------YGEDKLAAHFNITDKQR------AADAW 271
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALW----------NKVSVGPYQRKDNDITPDEE 456
LL ++ +W + + K ++ ++ + R D+
Sbjct: 272 LLETV-----------RLTWKIKLFTKLELELLTRLRESADEEAIKVFSRNLRDLLLAAP 320
Query: 457 AAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLK 515
A P++ PG + V++DS+G+++D F+ QN Q L K
Sbjct: 321 AGPQI-TIGLDPGIRTGVKVVVVDSTGKLLD--FSIIYPFAPQNEWHQSITD-----LAK 372
Query: 516 FMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRL 575
+Q +++ +G N + + + + + KM + +L+ V E+ +
Sbjct: 373 LAAKYQVNLLSIG--NGTGSRETERLVADLIKMYPDL---------KLTKVIVSEAGASV 421
Query: 576 YENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPD 635
Y S I++ + P ++ AV++ R LQ+PLA + + E S + ++ +
Sbjct: 422 YSASEIAAQEFPDLDVTLRGAVSIARRLQDPLAELVKI-----EAKSIGVGQYQHDVNQT 476
Query: 636 EKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFT 695
++ V+ D N VG+DIN+A A L ISGL A ++ + GA
Sbjct: 477 RLARCLDGVVEDCVNAVGVDINMA-----SAALLSHISGLNDTLAKNIVQYRDEHGAFSN 531
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE- 754
R H +G+K F A GFLR+ LD + +HPE+Y L ++++ E
Sbjct: 532 RMQLKNVHRMGEKAFQQAAGFLRIMNGDNP---------LDASCVHPEAYPLVEKISTEK 582
Query: 755 -------VYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLY 807
+ N+D+ +N A V D+ L T+
Sbjct: 583 NVAILELIGNKDVLHSVN--------ASHFVDDQYGL-------------------PTIR 615
Query: 808 LIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA---IC 864
+ REL +D R ++K E E + L EG +++ V V A I
Sbjct: 616 DVLRELEKPGRDPRPEFKTAQFKE-----GVEDINHLHEGMILEGVVSNVTNFGAFVDIG 670
Query: 865 VLESGLAGM-LMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
V + GL + M + D R + GDI+T K+ + K R ++ L
Sbjct: 671 VHQDGLVHISAMTNKFITDPRTV-----VKAGDIVTVKVVEVDKERKRIGL 716
>gi|379705712|ref|YP_005204171.1| S1 RNA binding domain-containing protein [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374682411|gb|AEZ62700.1| S1 RNA binding domain protein [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 710
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 183/823 (22%), Positives = 325/823 (39%), Gaps = 201/823 (24%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +L+I + I + L+L + IPFIA YRKE +L +EV
Sbjct: 8 KIAQELTIKENQITKVLELTS-EGNTIPFIARYRKEMTGNL------DEVQ--------- 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI DLDK L +RK+ + S + EE+ + L
Sbjct: 52 ---------IKAIIDLDKSMTALAERKATVLS----KIEEQGK-------------LTAE 85
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ K++EAAE +V++ L+ P E KR TK + +AGL+ +A
Sbjct: 86 LKKAIEAAEKLADVEE------LYLPYKE-----------KRRTKATIAREAGLFPLA-- 126
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+L LQ K + E+ A F C F ++ + GA + S
Sbjct: 127 ------RLILQ------------NKASLEKEAQAFICYGFETADKAIAGACEILIESFSE 168
Query: 291 EPCVRKYVRS---IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL 347
+ +R +V + + T D ++ F+ + + K + + L
Sbjct: 169 DNRLRSWVYNEIWSYSSVVSSVKDETADDKKTFQIYYDFS-------EKVSKMQGYRILA 221
Query: 348 IQKAEEEKLLQVTIKLPEDSLNKLFSD---CKEHYLSDGVSKSAQLWNDQRELILKDALD 404
+ + E+ +L+V D + + + + Y+ D +SK+ +
Sbjct: 222 LNRGEKLGILKVGFDHNTDKMVRFMASRFKNRNAYIDDVISKT---------------IK 266
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRV--- 461
++P+M + S ++ A+ + + + L N + V P + K + + A R
Sbjct: 267 KKIVPAMERRIHSELTESAEDGAIELFSENLRNLLLVSPLKGK---MVLGFDHAFRTGAK 323
Query: 462 LACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQ 521
LA GK TT V+ + + + +QSKKN L + + +
Sbjct: 324 LAVVDQTGKLMTTQVIYPVAP--------------ASQAKIEQSKKN----LAELISSYG 365
Query: 522 PHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRI 581
++ +G S S E V + ++S V +ES +Y S +
Sbjct: 366 IEIIAIGNGTASRES-------------EAFVAQVLKDFPDVSYVIVNESGASVYSASEL 412
Query: 582 SSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTP 634
+ + P + A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 413 ARHEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLAENLDF--- 469
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIF 694
V+ V NQVG++IN A A L +SGL + ++ + G I
Sbjct: 470 ---------VVDTVVNQVGVNINTA-----SPALLSHVSGLNKTISENIVKYRDEHGRIS 515
Query: 695 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+R++ LG K F A GFLR+ + ++LD+T +HPESY + L KE
Sbjct: 516 SREEIKKVPRLGAKAFEQAAGFLRIPGAK---------NILDNTGVHPESYKAVERLLKE 566
Query: 755 VYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELI 814
+ D+ D +D+ + ++ V + D+ +T L +ETL I +L+
Sbjct: 567 L-------DITDLDDSAKAKLQAVSVK-DMAETIGLG-----------QETLKDIIADLL 607
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
+D R+ ++ P ++ IS L G+ ++ TVR V
Sbjct: 608 KPGRDLRDDFEAPVLRQDVLDISD-----LEIGQKLEGTVRNV 645
>gi|428227125|ref|YP_007111222.1| Tex-like protein [Geitlerinema sp. PCC 7407]
gi|427987026|gb|AFY68170.1| Tex-like protein [Geitlerinema sp. PCC 7407]
Length = 754
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 131/635 (20%), Positives = 250/635 (39%), Gaps = 129/635 (20%)
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGE 199
LQ + E E+R+ +A +L D + + + E++D+ L +
Sbjct: 54 LQERHAYLTELEARKASILEAIAAQGKLTDELQAKISGCLQKTELEDLYLPY-------- 105
Query: 200 VGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK---E 256
RPKR T+ + + GL +A + ++ ++L+ +P
Sbjct: 106 ---------RPKRRTRATVARERGLEPLAQAIAHHNQPQAPAIALDAAAAPYVNPDAGVT 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST---CPT 313
TPEE LQGA + A ++ R Y+R + N + S+
Sbjct: 157 TPEE---------------ALQGAADILAEAVAENADHRAYLREFLLKNGLFSSKIKADF 201
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
P+G + + + + + P++ L + + E E +L + + E+++
Sbjct: 202 PEGSTKFEMYRNY-------QSPVKDIAPHNLLALLRGETEGVLTLEVTFDEEAV----- 249
Query: 374 DCKEHYLSDGVSKSAQLWNDQREL---ILKDALDNFLLPSMVKEARSLMSGRAKSWL--- 427
HYL S+S Q RE +LKDA + S++ + + K+W
Sbjct: 250 ---LHYLESQESRSKQ--RSLREFYRALLKDAFQRLMKTSLL----NTLIAEKKAWADGE 300
Query: 428 -LMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVD 486
+ + L N + P K P P C V LD +G+ ++
Sbjct: 301 SIQTFEANLRNLLLAAPAGMK-----PTLGLDPGFRTGC--------KMVALDETGKFLE 347
Query: 487 VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
+ + Q RD+ + + L +F+ ++ ++ +G N + D +
Sbjct: 348 --YQAIFPHQGQGQRDRAAAE-----LRRFIGQYRIELIAIG--NGTAGRETDAFVAEVL 398
Query: 547 KMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNP 606
+ ++ P V +E+ +Y S ++ + P V+ A+++ R LQ+P
Sbjct: 399 QTLDRKPVKV----------MVNEAGASVYSASEVAIAEFPELDVTVRGAISIARRLQDP 448
Query: 607 LAMVATL------CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAI 660
LA + + G + + KL + +++ + N VG+D+N A
Sbjct: 449 LAELVKIDPKSIGVGQYQHDVDQKLLKRK-----------LDETVESCVNYVGVDLNTA- 496
Query: 661 HREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVR 720
+E L F+SG+ P A ++ + GA R++ + LG K F A GFLR+
Sbjct: 497 SKEL----LTFVSGISPAVANNIVAYRNQNGAFKHRRELLKVTKLGPKAFEQAAGFLRI- 551
Query: 721 RSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
R G+ + LD+T +HPESYG+ + +A ++
Sbjct: 552 RGGK--------NPLDNTAVHPESYGIVEAIAADL 578
>gi|320547221|ref|ZP_08041514.1| YhgF like protein [Streptococcus equinus ATCC 9812]
gi|320448109|gb|EFW88859.1| YhgF like protein [Streptococcus equinus ATCC 9812]
Length = 710
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 185/821 (22%), Positives = 321/821 (39%), Gaps = 197/821 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +L I I + LDL Q IPFIA YRKE +L +EV
Sbjct: 8 KIAQELGIKESQISKVLDLTS-QGNTIPFIARYRKEMTGNL------DEVQ--------- 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ +I DLDK L +RK+ + + +I ++ +L Q
Sbjct: 52 ---------IKSIIDLDKSMTALAERKATVLA-----------KIQEQGKLTAELQ---- 87
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
K++E AE +V++ L+ P E KR TK + +AGL+ +A
Sbjct: 88 --KAIETAEKLADVEE------LYLPYKE-----------KRRTKATIAREAGLFPLA-- 126
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+L LQ K + E+ A F F +++ L GA + S
Sbjct: 127 ------RLILQ------------NKASLEKEAQAFVTESFETAEKALAGACDILIESFSE 168
Query: 291 EPCVRKYV-RSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ +R +V I+ +++ ST D A D F EK + K + + L +
Sbjct: 169 DNRLRSWVYNEIWSYSSITSTVK----DEAADDKKTFQIYYDFSEK-VGKIQGYRILALN 223
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFS---DCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+ E+ +L+V D + + + K Y+ D +SK+ +
Sbjct: 224 RGEKLGILKVGFDHNTDKMIRFMAARFKNKNAYIDDVISKT---------------IKKK 268
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
++P+M + S ++ A+ + + + L N + V P + K + +
Sbjct: 269 IVPAMERRIHSELTESAEDGAIELFSENLRNLLLVSPLKGK--------------MVLGF 314
Query: 467 GPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
P + ++D +G+++ + SQ + +QSKK+ L + + + ++
Sbjct: 315 DPAFRTGAKLAVVDQTGKLMTTQVIYPVPPASQ-AKIEQSKKD----LAELIRSYGIEII 369
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+G S S E V + ++S V +ES +Y S ++ +
Sbjct: 370 AIGNGTASRES-------------EAFVAQVLKDFPDVSYVIVNESGASVYSASELARHE 416
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKY 638
P + A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 417 FPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLAENLDF------- 469
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
V+ V NQVG++IN A A L +SGL + ++ + G I +R++
Sbjct: 470 -----VVDTVVNQVGVNINTA-----SPALLSHVSGLNKTISENIVKYRDENGRITSREE 519
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
LG K F A GFLR+ + ++LD+T +HPESY + L KE+
Sbjct: 520 IKKVPRLGAKAFEQAAGFLRIPGAE---------NILDNTSVHPESYKAVEHLLKEL--- 567
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKE--KKRENKRETLYLIRRELIHG 816
+ D D K L IKE +K +ETL I +L+
Sbjct: 568 ------------------AITDLDDSAKVKLQAVSIKEMAEKINIGQETLKDIIADLLKP 609
Query: 817 FQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
+D R+ ++ P ++ IS L G+ ++ TVR V
Sbjct: 610 GRDLRDDFEAPVLRQDVLDISD-----LEIGQKLEGTVRNV 645
>gi|423607933|ref|ZP_17583826.1| hypothetical protein IIK_04514 [Bacillus cereus VD102]
gi|401239507|gb|EJR45934.1| hypothetical protein IIK_04514 [Bacillus cereus VD102]
Length = 722
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 206/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSAV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D +
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVDEIVTFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 255 Y---KKVIRDNDSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|404448803|ref|ZP_11013795.1| transcriptional accessory protein [Indibacter alkaliphilus LW1]
gi|403765527|gb|EJZ26405.1| transcriptional accessory protein [Indibacter alkaliphilus LW1]
Length = 751
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 147/688 (21%), Positives = 265/688 (38%), Gaps = 157/688 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFI+ YRKE SL +EV + AI D ++ L KR
Sbjct: 33 VPFISRYRKEVTGSL------DEVQ------------------VAAIRDRVQQLRDLDKR 68
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ A+ +++ Q+L + K + AAET ++D+ L F
Sbjct: 69 REAILKSIQEQ-----------------QKLTPELEKKINAAETMSILEDLYLPF----- 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+PKR TK + + GL +A K +S + L+ +E ++
Sbjct: 107 ------------KPKRRTKATVAREKGLEPLAEKI-FSQDSFDLEAEASTYINEEKE--- 150
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP-D 315
S + LQGAR + A ++ +RK +R+ F++ + + P
Sbjct: 151 -------------VTSVEEALQGARDIIAEWVNENVELRKKMRTFFIEEGLFVSKVIPGK 197
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
D AI F W +P++ + L +++ E+E L + C
Sbjct: 198 EDEAIKYKDYF---DWT--EPIKSAPSHRVLAMRRGEKELFL-------------MLDSC 239
Query: 376 KEHYLSDGVSKSAQLWN------DQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
+ + + + L N +Q +L +KD L PSM E R +A +
Sbjct: 240 PDEISAIALMEKTVLENASNASVEQVKLAIKDCYKRLLKPSMETEVRLYTKKKADEEAIR 299
Query: 430 EYGKALWNKVSVGPY-QRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVL 488
+ + L + P ++ I P + + C GP +F D +
Sbjct: 300 VFAENLRQLLLAAPLGEKAVMAIDPGFRTGCKTV--CLGPQGQLLSF----------DAI 347
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFK 547
+ + Q K + ++ +++ HQ + +G S +
Sbjct: 348 YPN----------EPQKKTAEAGATVRHLVEKHQVEAIAIGNGTAS-------------R 384
Query: 548 MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPL 607
E + +G + + I +ES +Y S ++ ++ P V+ AV++GR L +PL
Sbjct: 385 ETESFVKSLGLPKNVI-ITMVNESGASIYSASDVAREEFPDMDLTVRGAVSIGRRLMDPL 443
Query: 608 AMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
A + + + ++ +N L K + + VM N VG+++N A +
Sbjct: 444 AELVKIDAKSIGVGQYQHDVDQNAL----KNSLDDTVM-SCVNGVGVEVNTASKQ----- 493
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L ++SGLGP A ++ G +R + LG K F A GFLRVR +
Sbjct: 494 LLTYVSGLGPVLAQNIVSYRNENGPFKSRDEIKKVPRLGDKAFEQAAGFLRVRNA----- 548
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV 755
++ LD + +HPE Y L +++AK++
Sbjct: 549 ----VNPLDASAVHPERYALVEKMAKDL 572
>gi|423553826|ref|ZP_17530153.1| hypothetical protein IGW_04457 [Bacillus cereus ISP3191]
gi|401182646|gb|EJQ89778.1| hypothetical protein IGW_04457 [Bacillus cereus ISP3191]
Length = 722
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 205/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D +
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVDEIVTFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSAQ L ++D + S+ +E R ++ A+ + +
Sbjct: 255 Y---KKVIRDNDSKSAQYVK----LAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|372280723|ref|ZP_09516759.1| S1 RNA-binding domain-containing protein [Oceanicola sp. S124]
Length = 791
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 128/601 (21%), Positives = 240/601 (39%), Gaps = 122/601 (20%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L ++KS+ AET+ +++D+ L + +PKR TK + GL
Sbjct: 89 KLTPELAKSIAGAETKAQLEDIYLPY-----------------KPKRRTKAMIARENGLE 131
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAA 285
+A L D PE +A+ + ++A L GAR +
Sbjct: 132 PLAEAI-------------------LADRSADPEVLAAGYITENVEDTKAALNGARDILM 172
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTP----DGDSAIDSFHQFAGVKWLREKPLRKFE 341
++ + + +R NAV+S +G D F G W K
Sbjct: 173 ERLAEDADLLGRLRGYMQGNAVLSARVVAGKEQEGAKFSDYFDHSEG--WA------KVP 224
Query: 342 DAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQ--RELI- 398
+ L + +A E ++ + I PE+ ++ +S +S S + DQ R++
Sbjct: 225 SHRALAMLRASNEGIVTLEIAPPEEEADRPLD-----MVSAKLSASGEGPGDQWLRKVAG 279
Query: 399 ----LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD 454
+K +L SM + S M RA + + + L + + P K
Sbjct: 280 WTWRVKLSL------SMTLDLLSEMRARAHEEAIAVFARNLKDLLLAAPAGSKAT----- 328
Query: 455 EEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRDQQSKKNDQE 511
PG + ++D++G+++ D L+ + + + Q
Sbjct: 329 ---------LGLDPGIRTGVKAAVVDATGKLLATDTLYP---------FQPKNDIRGAQH 370
Query: 512 RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
+L + H ++ +G N + + + + KM+ +H + + + V E+
Sbjct: 371 AILSLVAKHGVELIAIG--NGTASRETEKLVTETLKMMPDH-------VTKPTKVVVSEA 421
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+Y S +++ + PG +++ AV++ R LQ+PLA + + E S + ++
Sbjct: 422 GASVYSASELAAREFPGLDVSLRGAVSIARRLQDPLAELVKI-----EPKSIGVGQYQHD 476
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFISGLGPRKAASLQRSLVRA 690
+ +E V+ D N VG+D+N A APL +SGLGP A ++
Sbjct: 477 VDQHRLAKSLEAVVEDAVNAVGVDLNTA------SAPLLAHVSGLGPGLAEAVVSHREMK 530
Query: 691 GAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQE 750
GA +RK+ + LG + F GFLR+R + LD + +HPE+YG+A++
Sbjct: 531 GAFRSRKELLEVARLGPRAFEQCAGFLRIREGDEP---------LDASSVHPEAYGVARK 581
Query: 751 L 751
+
Sbjct: 582 I 582
>gi|301051978|ref|YP_003790189.1| transcription accessory protein [Bacillus cereus biovar anthracis
str. CI]
gi|300374147|gb|ADK03051.1| probable transcription accessory protein, S1 RNA-binding domain
protein [Bacillus cereus biovar anthracis str. CI]
Length = 722
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 208/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIRDNDSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|228912986|ref|ZP_04076629.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228846661|gb|EEM91670.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 722
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 207/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIRDNDSKSAQYVK----LAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|294794649|ref|ZP_06759785.1| S1 RNA binding domain protein [Veillonella sp. 3_1_44]
gi|294454979|gb|EFG23352.1| S1 RNA binding domain protein [Veillonella sp. 3_1_44]
Length = 767
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 157/771 (20%), Positives = 309/771 (40%), Gaps = 124/771 (16%)
Query: 151 ESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRP 210
E+RR + +++ D + KSLEAA +E++D+ L + RP
Sbjct: 62 ETRRQEIIASITEQEKMTDELMKSLEAATKLQELEDLYLPY-----------------RP 104
Query: 211 KRSTKYSSCSKAGLWEVASKFGYSSEQLG--LQLSLEKMGDELEDPKETPEEMASNFKCA 268
K+ T+ + GL +A + G L+++ E + +E+ P++
Sbjct: 105 KKRTRAMIARERGLEPLADMIINDTVTSGDPLEIAKEYITEEVPTPEDA----------- 153
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+QGA + A +S R Y+R + + + F Q+A
Sbjct: 154 --------IQGASDIVAEIVSDSADFRAYLRKKMWNEGFIQ-AELSGEEEEQQQFLQYAE 204
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+P+R+ + L + + E+ L++ + +P D+ Y+ + K+
Sbjct: 205 YA----EPVRQMPSHRILAVNRGEKLGALKLALTVPGDTYIA--------YMLQKLEKNP 252
Query: 389 Q-LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
+ ++ + + + DA + P++ +E R+ ++ +A + +G L N + P
Sbjct: 253 KSIFAEYKAAAVADAYKRLIFPALEREIRNELTEKADEQAIKVFGVNLKNLLLQPPL--- 309
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSK 506
A V+ PG + ++D G V+D G L + ++++
Sbjct: 310 ----------AGHVI-MGLDPGYRTGCKMAIIDQQGNVLDY---GAYYLTNSEKLRKEAQ 355
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
K +++ KF V L ++ S + + + M+EE D + +
Sbjct: 356 KVLADKIRKFK-------VTLLSIGNGTASYETE--QFASTMIEEEKLDCHY-------I 399
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
+E+ +Y S+++ D+LP ++ AV++ R +Q+PLA + + S +
Sbjct: 400 ITNEAGASVYSASKLAIDELPELDVTIRGAVSIARRVQDPLAESVKI-----DPKSIGVG 454
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
++ + + ++QV+ V N VG+++N A A LQ ++G+ A ++
Sbjct: 455 QYQHDVNQKQLTHTLDQVVETVVNHVGVELNTA-----SPAILQHVAGISSAVAKNIVAY 509
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
G +RK+ + LG F GFLR++ LD+T +HPESY
Sbjct: 510 RQENGVFKSRKELLKVPRLGPAAFTQCAGFLRLQHGKNP---------LDNTSVHPESYE 560
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETL 806
LA+ + E + L D +D ++ + V K L+D K + T+
Sbjct: 561 LAERIIGE-----LGFTLKDLQDKAQLEVLQV-------KLPLVDAEKMAAKLDAGVPTV 608
Query: 807 YLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVL 866
I L +D R P + +++S E + G +V+ TV V A
Sbjct: 609 RDILAALAKPGRDPREDLPAPLTRK--HVVSLE---DIKVGTIVKGTVHNVVDFGAFVDF 663
Query: 867 ESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
G+L + + + + SD L GDI+ +I S+ R ++ L +
Sbjct: 664 GLKTNGLLHRSELCNSRQHP--SDVLAVGDIIEAQIISVDVKRNRIGLSVK 712
>gi|229089378|ref|ZP_04220653.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus Rock3-42]
gi|228693959|gb|EEL47647.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus Rock3-42]
Length = 722
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 206/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D +
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVDEIVTFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 255 Y---KKVIRDNDSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|374338447|ref|YP_005095161.1| transcription accessory protein (S1 RNA-binding domain)
[Streptococcus macedonicus ACA-DC 198]
gi|372284561|emb|CCF02844.1| Transcription accessory protein (S1 RNA-binding domain)
[Streptococcus macedonicus ACA-DC 198]
Length = 710
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 184/819 (22%), Positives = 326/819 (39%), Gaps = 193/819 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K DL+I I + LDL Q IPFIA YRKE +L +EV
Sbjct: 8 KIAQDLNIKESQIAKVLDLTS-QGNTIPFIARYRKEMTGNL------DEVQ--------- 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI DLDK L RK+ + + + EE+ + L
Sbjct: 52 ---------IKAIIDLDKSMTALTDRKATVLA----KIEEQGK-------------LTAE 85
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ K++E AE +V++ L+ P YK KR TK + +AGL+ +A
Sbjct: 86 LKKAIEKAEKLADVEE------LYLP----------YKE-KRRTKATIAREAGLFPLA-- 126
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+L LQ K + E A+NF F ++ L GA + S
Sbjct: 127 ------RLILQ------------NKPSLEVEAANFITEGFETADKALAGACEILIEAFSE 168
Query: 291 EPCVRKYV-RSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ +R +V I+ ++++ST D A D+ F EK + K + + L +
Sbjct: 169 DNKLRSWVYNEIWSYSSIISTVK----DEAADNNKTFQIYYDFSEK-VSKIQGYRILALN 223
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFS---DCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+ E+ +L+V + D + + K Y+ D ++ +
Sbjct: 224 RGEKLGILKVGFEHNIDKMVRFMGARFKNKNAYIDD---------------VIAGTIKKK 268
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
++P+M + S ++ A+ + + + L N + V P + K + +
Sbjct: 269 IVPAMERRVHSELTESAEDGAIELFSENLRNLLLVSPLKGK--------------MVLGF 314
Query: 467 GPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
P + ++D +G+++ + SQ + +Q+KK+ L + + ++
Sbjct: 315 DPAFRTGAKLGVVDQTGKLMTTQVIYPVPPASQ-AKIEQAKKD----LADLIRTYGVEII 369
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+G S S E V + ++S V +ES +Y S ++ +
Sbjct: 370 AIGNGTASRES-------------EAFVAQVLKDFPDVSYVIVNESGASVYSASELARHE 416
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKY 638
P + A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 417 FPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLAEKLDF------- 469
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
V+ V NQVG++IN A A L +SGL + ++ + G I +R++
Sbjct: 470 -----VVDTVVNQVGVNINTA-----SPALLARVSGLNKTISENIVKYRDENGRIASREE 519
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
LG K F A GFLR+ S ++LD+T +HPESY + L KE+
Sbjct: 520 IKKVPRLGAKAFEQAAGFLRIPGSE---------NILDNTGVHPESYKAVERLLKEL--- 567
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
++ D +D+ + ++ V ++T +I + ETL I +L+ +
Sbjct: 568 ----NITDLDDSAKTKLQSVS-----IETMAETINIGQ-------ETLKDIIADLLKPGR 611
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
D R+ ++ P ++ IS L G+ ++ TVR V
Sbjct: 612 DLRDDFEAPVLRQDVLDISD-----LEIGQKLEGTVRNV 645
>gi|196234543|ref|ZP_03133365.1| RNA binding S1 domain protein [Chthoniobacter flavus Ellin428]
gi|196221374|gb|EDY15922.1| RNA binding S1 domain protein [Chthoniobacter flavus Ellin428]
Length = 770
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 152/684 (22%), Positives = 257/684 (37%), Gaps = 148/684 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE K E +EV + +I D ++ L KR
Sbjct: 33 VPFIARYRKE------KTGELDEVQ------------------ITSIRDRIEQLEELDKR 68
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ A+ E R++ E ++ +EAA++ ++D+ L F
Sbjct: 69 REAIVKSL------EERKLMTEV-----------LAAKIEAADSMTTLEDIYLPF----- 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPK++TK + GL +A E L Q D DP+
Sbjct: 107 ------------RPKKTTKATIAKDLGLEPLA-------EILWAQ-------DPATDPQA 140
Query: 257 TPE-----EMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC 311
E+ N K A L GAR + A I+ + R +R ++++ V+ +
Sbjct: 141 AAAPFVGPEIEINAKKHSVPDVAAALAGARDILAERINDDANARAKLRELYLNKGVIKSK 200
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
+ F + W +P K + L I++ E E L + E L
Sbjct: 201 VISGKEEEGAKFKDY--FDW--TEPAEKAPSHRILAIRRGESEGFLFSRLVPDEIEAGAL 256
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
E G S +++ Q +L ++D L +M EAR+ +A + +
Sbjct: 257 L----ERLFVKGKSPASE----QVKLAVQDCYKRLLGFAMEGEARTFYKKKADEEAIRVF 308
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVL 488
L + P +K + PG + V+LD G+++ DV+
Sbjct: 309 ADNLRELLLASPLGQK--------------VTLGIDPGFRTGCKVVLLDRQGKLLAHDVV 354
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
+ + RDQ E + + ++ + +G S +
Sbjct: 355 YP------EKGARDQMEA---AEMIKAVVTKYKVEAIAIGNGTAS-------------RE 392
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
E R +G + +V ES +Y S ++ ++ P + V+ AV++GR L +PLA
Sbjct: 393 TETFVRKLGLP-SSIPVVMVSESGASIYSASEVAREEFPDKDVTVRGAVSIGRRLMDPLA 451
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ L + ++ +N L ++ V++ N VG++IN A
Sbjct: 452 ELVKLDPKSIGVGQYQHDVDQNALKRS-----LDDVVISCVNNVGVEINTASKHL----- 501
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L +ISGL R AA++ G +RK+ + GLG K F A GFLR+R
Sbjct: 502 LAYISGLNARVAANIVAHRDENGPFKSRKELLKVSGLGPKAFEQAAGFLRIRDGEHP--- 558
Query: 729 SQFIDLLDDTRIHPESYGLAQELA 752
LD + +HPE Y L ++A
Sbjct: 559 ------LDGSAVHPERYELVDKMA 576
>gi|303228489|ref|ZP_07315320.1| Tex-like protein N-terminal domain protein [Veillonella atypica
ACS-134-V-Col7a]
gi|302516847|gb|EFL58758.1| Tex-like protein N-terminal domain protein [Veillonella atypica
ACS-134-V-Col7a]
Length = 725
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 126/609 (20%), Positives = 248/609 (40%), Gaps = 105/609 (17%)
Query: 151 ESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRP 210
ESRR + +++ D + SL A +E++D+ L + RP
Sbjct: 65 ESRRQEIINAITEQEKMTDELMASLMKAVKLQELEDLYLPY-----------------RP 107
Query: 211 KRSTKYSSCSKAGLWEVASKFGYSSEQLG--LQLSLEKMGDELEDPKETPEEMASNFKCA 268
K+ T+ + GL +A + G L ++ E + +E+ P +
Sbjct: 108 KKRTRAMIARERGLEPLADMILNDTVTSGNPLDIAREYISEEVPTPADA----------- 156
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+QGA + A +S R +R + D + D F Q+
Sbjct: 157 --------IQGASDIVAEIVSDSADFRATLRKRMWKEGFIQAELVEDNEHK-DQFLQYNE 207
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+P+R+ + L + + E+ L++ + +P++S + Y+ G++ +
Sbjct: 208 YA----EPVRQMPSHRILAVNRGEKLGALKLALTVPDESYIQ--------YMVRGITNNE 255
Query: 389 Q-LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
Q +++D + + DA + P++ ++ R+ ++ A + +G L N + P
Sbjct: 256 QSIFSDVKASAVADAYKRLMFPALERDIRNELTESADEQAIKVFGVNLKNLLLQPPL--- 312
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSK 506
A V+ PG + ++D+ G V+D G L + Q+++
Sbjct: 313 ----------AGHVI-MGLDPGYRTGCKMAIIDAQGNVLDY---GAYYLTNSEKLKQEAQ 358
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
K E++ KF +V +L N + + + + KM+EE D + +
Sbjct: 359 KKLAEKIRKF------NVTLLSIGNGTASY---ETEQFASKMIEEEKLDCHY-------I 402
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
+E+ +Y S+++ D+LP ++ AV++ R +Q+PLA + + S +
Sbjct: 403 ITNEAGASVYSASKLAIDELPDLDVTIRGAVSIARRVQDPLAESVKI-----DPKSIGVG 457
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
++ + + ++QV+ V N VG+++N A A LQ I+G+ A ++
Sbjct: 458 QYQHDVNQKQLTHTLDQVVESVVNHVGVELNTA-----SPAILQHIAGISGTVAKNIVAF 512
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
G +RK + LG F GFLR+ + LD+T +HPESY
Sbjct: 513 RQENGGFTSRKQLLKVPRLGPAAFTQCAGFLRLNGAKNP---------LDNTSVHPESYE 563
Query: 747 LAQELAKEV 755
LA+ + E+
Sbjct: 564 LAERIIGEL 572
>gi|423393308|ref|ZP_17370534.1| hypothetical protein ICG_05156 [Bacillus cereus BAG1X1-3]
gi|401630227|gb|EJS48034.1| hypothetical protein ICG_05156 [Bacillus cereus BAG1X1-3]
Length = 722
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 108/499 (21%), Positives = 205/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P E A F S++ LQGA+ + A +S R ++R+ ++S+
Sbjct: 139 KENPTEKAMEFVDGEKEVESAEDALQGAQDIIAELVSDNASYRSWIRNTTFRKGIMSSSV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + E+PL+K + L + + E+E +L+V++ P + +N+
Sbjct: 199 KDKEKDEKNIYEMY----YDYEEPLQKIVPHRVLAMNRGEKEDVLRVSVVTPTEEINQFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSA +L ++D + PS+ +E R ++ A+ + +
Sbjct: 255 H---KKMIRDEASKSAHYV----QLAIEDGYKRLIQPSIEREIRKELTKTAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V VDV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLSVVDDTGKVLNVDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
+ ++ + +++L + +Q ++ +G S + E I +++
Sbjct: 355 HPPVRKYEDAK---------KKVLSIIDKYQVEMIAIGNGTASRET-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
RDV + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKRDVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R + LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEDGKFTKRTELKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|312899402|ref|ZP_07758733.1| S1 RNA binding domain protein [Enterococcus faecalis TX0470]
gi|311293446|gb|EFQ72002.1| S1 RNA binding domain protein [Enterococcus faecalis TX0470]
Length = 730
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 176/793 (22%), Positives = 312/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ L+GA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALRGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+V++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKVSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSFAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|158337244|ref|YP_001518419.1| S1 RNA-binding domain-containing protein [Acaryochloris marina
MBIC11017]
gi|158307485|gb|ABW29102.1| S1 RNA binding domain protein [Acaryochloris marina MBIC11017]
Length = 720
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 161/755 (21%), Positives = 280/755 (37%), Gaps = 179/755 (23%)
Query: 54 HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT 113
+LSIS + LDL + IPF+A YRKE
Sbjct: 10 QELSISPQRLQNALDLFA-EGATIPFVARYRKERT------------------------- 43
Query: 114 LKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK 173
+D+ L R+ + + Y EE + I + +A +L + +
Sbjct: 44 ----------GQMDETQL----RQLSERFTYLTELEERKKTILES--IAQQNKLTELLQA 87
Query: 174 SLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS---K 230
+EA + E++D+ L + RPKR T+ + + GL +A
Sbjct: 88 KIEACLLKTELEDLYLPY-----------------RPKRRTRATIAKEKGLEPLAQWLQA 130
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+ L L+ E A+ + +++ LQGA + A I+
Sbjct: 131 LNKPTATLSQDLATE----------------AARYINKDVATTEDALQGASDILAEGIAD 174
Query: 291 EPCVRKYVR-SIFMDNAVVSTCPT--PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL 347
+ +R +++ F VS + P+G + + + + R K + L
Sbjct: 175 QAEIRTHLKHRFFQVGEFVSQVKSKYPEGSTKFEMYRSYQA----RAKNILAH---NLLA 227
Query: 348 IQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFL 407
+ + E E +L+V + + E+ ++ D +E + + + ++KDA +
Sbjct: 228 LYRGEAEGILKVELAIDEE---RILGDIEERVIRSKIRAVRDFFRG----VVKDAYTRLI 280
Query: 408 LPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG 467
PS+VKE R+ A S + + L + P K P P C
Sbjct: 281 KPSVVKEVRAACKAEADSESIQTFATNLRELLLSSPAGMK-----PTLGIDPGFRTGC-- 333
Query: 468 PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
V LD +G+ ++ + ++ RDQ +K + + + +Q ++ +
Sbjct: 334 ------KVVALDHTGKFLE--YQAIFPHQAVGQRDQAAKT-----VARLIQTYQIDLIAI 380
Query: 528 GAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
G N + D + K ++ P V +ES +Y S I+ + P
Sbjct: 381 G--NGTAGRETDAFVADVLKTLDRKPIKV----------MVNESGASIYSASEIAIAEFP 428
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATL----CGPGR-------EILSWKLCPLENFLTPDE 636
V+ A+++ R LQ+PLA + L G G+ ++L KL
Sbjct: 429 DLDITVRGAISIARRLQDPLAELVKLDPKSIGVGQYQHDVDQKLLKQKL----------- 477
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTR 696
E+ + N VG+D+N A +E L F+SG+ A ++ + GA R
Sbjct: 478 -----EETVESCVNYVGVDLNTA-SKEL----LTFVSGITGAIANNIIAYRNQNGAFKNR 527
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY 756
K + LG K F A GFLR+R LD+T +HPESYG+
Sbjct: 528 KQLLKVAKLGPKAFEQAAGFLRIRTGDNP---------LDNTAVHPESYGVV-------- 570
Query: 757 NRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLD 791
+ I DL + H+ RP LKTY+ +
Sbjct: 571 -KTISADLELPLSQIAKIPAHL--RPGDLKTYVTE 602
>gi|256618890|ref|ZP_05475736.1| RNA binding S1 [Enterococcus faecalis ATCC 4200]
gi|256598417|gb|EEU17593.1| RNA binding S1 [Enterococcus faecalis ATCC 4200]
Length = 730
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 176/793 (22%), Positives = 311/793 (39%), Gaps = 178/793 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV I ++++++ LQ
Sbjct: 38 VPFIARYRKEMTGSL------DEVQ---------------------IREIEERYHYLQN- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KKR EE R I ++ +L ++L I K+++ + E +L+ P
Sbjct: 70 -------LKKRKEEVLRLIEEQGKL--TKELKTDIQKAVKMQQVE----------DLYRP 110
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A E + L K + + KE
Sbjct: 111 ----------YKQ-KRRTKATIAKEKGLEPLADWLLSLPENADI---LAKAATFINEEKE 156
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
+++ LQGA + A IS EP R ++R + +A VS +
Sbjct: 157 VA-------------TAEIALQGAHEILAERISDEPKYRTWLRDYMVKHAQYVSVVKDEE 203
Query: 316 GDS--AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
D + ++ FA +P+ K + L + E+E +L+ ++ E +N F
Sbjct: 204 KDEKRTYEMYYDFA-------EPVSKMVPHRVLATNRGEKEDILKFSLVADETKINDYF- 255
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+ + + A + + L D+ F+ P++ +E R+ ++ +A + +G+
Sbjct: 256 --QRQLIGKQATSLAAPYIEAAYL---DSYKRFIGPAIEREIRNELTEKADEQAIAIFGE 310
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L N + P + K + + P + ++D +G+V+
Sbjct: 311 NLRNLLLQSPLKGK--------------VVLGFDPAYRTGCKLAVVDETGKVL-----AI 351
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ ++ K + D+Q +V +G S + +++ + + ++
Sbjct: 352 QVIYPHKPATAAKREAAGPAFKKIIEDYQVDMVAIGN---GTASRESELF--VAEQLKAV 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
RDV + V +E+ +Y S ++ + P + + AV++ R LQ+PLA +
Sbjct: 407 KRDVFY-------VIVNEAGASVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVK 459
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ +L +F V+ NQVG+D+N A +
Sbjct: 460 IDPKAVGVGQYQHDVSQKRLAEQLDF------------VVETAVNQVGVDVNTASAQ--- 504
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
LQ ISGL A +L G R LG K F A+GFLR+
Sbjct: 505 --LLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVPRLGPKAFEQAIGFLRIPNGK-- 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP-DL 784
++LD+T IHPESY +AQ + + + ++ E AIE ++ P +
Sbjct: 561 -------NVLDNTGIHPESYPVAQAILE-------KAEIASKELGTAEAIEKLKQLPVNQ 606
Query: 785 LKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTL 844
L T L E ETL I LI +D R++ P ++ T + L
Sbjct: 607 LATEL----------EVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVL-----TMEDL 651
Query: 845 AEGRVVQATVRRV 857
G +Q TVR V
Sbjct: 652 KPGMEMQGTVRNV 664
>gi|269798441|ref|YP_003312341.1| RNA binding S1 domain-containing protein [Veillonella parvula DSM
2008]
gi|269095070|gb|ACZ25061.1| RNA binding S1 domain protein [Veillonella parvula DSM 2008]
Length = 770
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 158/779 (20%), Positives = 310/779 (39%), Gaps = 132/779 (16%)
Query: 151 ESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRP 210
E+RR + +++ D + KSLEAA +E++D+ L + RP
Sbjct: 66 ETRRQEIIASITEQEKMTDELMKSLEAATKLQELEDLYLPY-----------------RP 108
Query: 211 KRSTKYSSCSKAGLWEVASKFGYSSEQLG--LQLSLEKMGDELEDPKETPEEMASNFKCA 268
K+ T+ + GL +A + G L+++ E + +E+ P++
Sbjct: 109 KKRTRAMIARERGLEPLADMIINDTVTSGDPLEIAKEYITEEVPTPEDA----------- 157
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+QGA + A +S R Y+R + + + F Q+A
Sbjct: 158 --------IQGASDIVAEIVSDSADFRAYLRKKMWNEGFIQ-AELSGEEEEQQQFLQYAE 208
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+P+R+ + L + + E+ L++ + +P D+ Y+ + K+
Sbjct: 209 YA----EPVRQMPSHRILAVNRGEKLGALKLVLTVPGDTYVA--------YMVQKLEKNP 256
Query: 389 Q-LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
+ ++ D + + DA + P++ +E R+ ++ A + +G L N + P
Sbjct: 257 KSIFADYKAAAVADAYKRLIFPALEREIRNELTENADEQAIKVFGVNLKNLLLQPPL--- 313
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSK 506
A V+ PG + ++D G V+D G L + ++++
Sbjct: 314 ----------AGHVI-MGLDPGYRTGCKMAIIDQQGNVLDY---GAYYLTNSEKLRKEAQ 359
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
K +++ KF V L ++ S + + + M+EE D + +
Sbjct: 360 KVLADKIRKFK-------VTLLSIGNGTASYETE--QFASTMIEEETLDCHY-------I 403
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
+E+ +Y S+++ D+LP ++ AV++ R +Q+PLA + + S +
Sbjct: 404 ITNEAGASVYSASKLAIDELPDLDVTIRGAVSIARRVQDPLAESVKI-----DPKSIGVG 458
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
++ + + ++QV+ V N VG+++N A A LQ ++G+ A ++
Sbjct: 459 QYQHDVNQKQLTHTLDQVVETVVNHVGVELNTA-----SPAILQHVAGISSAVAKNIVAY 513
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
G +RK+ + LG F GFLR++ LD+T +HPESY
Sbjct: 514 RQENGVFKSRKELLKVPRLGPAAFTQCAGFLRLQHGKNP---------LDNTSVHPESYE 564
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL----LKTYLLDRHIKEKKRENK 802
LA+ + E L ++ ++D+ L +K L+D K +
Sbjct: 565 LAERIIGE----------------LGFTLKDLQDKSQLEALQVKLPLVDADKMAAKLDAG 608
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
T+ I L +D R P + +++S E + G VV+ TV V A
Sbjct: 609 VPTVRDILAALAKPGRDPREDLPAPLTRK--HVVSLE---DIKVGTVVKGTVHNVVDFGA 663
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM 921
G+L + + + + SD L GDI+ +I S+ R ++ L + ++
Sbjct: 664 FVDFGLKTNGLLHRSELCNSRQHP--SDVLAVGDIIEAQIISVDVKRNRIGLSVKALQL 720
>gi|21620092|gb|AAH33074.1| SUPT6H protein [Homo sapiens]
Length = 603
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 136/350 (38%), Gaps = 78/350 (22%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 196 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 255
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 256 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 292
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 293 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 347
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 348 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 407
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 408 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 467
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVST----CPTPDGDSAIDSFHQFAG 328
M A++I+ EP VR+ +R F + A + T TP +HQ
Sbjct: 468 MVALQIAREPLVRQVLRQTFQERAKLMTPSYSYTTPSQPITTPQYHQLQA 517
>gi|354566248|ref|ZP_08985421.1| Tex-like protein [Fischerella sp. JSC-11]
gi|353546756|gb|EHC16204.1| Tex-like protein [Fischerella sp. JSC-11]
Length = 719
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 148/689 (21%), Positives = 267/689 (38%), Gaps = 152/689 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE + E NEV L + D L++R
Sbjct: 32 IPFIARYRKE------RTGEMNEVQ------------------LRELADRHTYLTELEER 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
KS + + +A +L D + + +EA + E++D+ L F
Sbjct: 68 KSVILNA-----------------IAEQGKLTDELKEKIEACLQKTELEDLYLPF----- 105
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A ++ + + P
Sbjct: 106 ------------RPKRRTRATVAREKGLEPLAE-------------FIKSLNTKNAAPAN 140
Query: 257 TPEEMASNFKCAM-FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV-VSTCPT- 313
E A A N++Q L+GA + A E++ + +R Y+R ++ + VS
Sbjct: 141 LETEAAKYISEAKGVNTAQEALKGASDILAEEVAEKAELRAYLREYLLEEGIFVSRVKDE 200
Query: 314 -PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
P+G + + + + + ++ L + + E E++L I ED +
Sbjct: 201 HPEGTTKFEMYRNY-------QIKVKNIAPHNLLALCRGENEQVLSFDISFDEDMV---L 250
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
S + + SK + N +E+ LKDA + + S++ E S A + +
Sbjct: 251 SYLESQEIR---SKHRPIRNFYQEM-LKDAFNRLMKTSLISEVISEKKLYADVESIKTFE 306
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGC 492
L + P K P P C +L+ +G+ ++
Sbjct: 307 ANLRELLLSAPAGMK-----PTMAIDPGFRTGC--------KVAILNETGKFLEYQAVFP 353
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
Q ++ Q KN E+ ++ ++ +G N + + D+ + + +E
Sbjct: 354 HQAAEQRLKAAQILKNLIEK-------YKIELIAIG--NGTASRETDEFVAEVLRTLERK 404
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
P V IV +ES +Y S++++ + P V+ A+++GR LQ+PLA +
Sbjct: 405 PIKV--------IV--NESGASIYSASKVAAQEFPDLDVTVRGAISIGRRLQDPLAELVK 454
Query: 613 L------CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G + + KL +++ + N VG+D+N A +E
Sbjct: 455 IDPKSIGVGQYQHDVDQKLLK-----------KKLDETVESCVNYVGVDLNTA-SKEL-- 500
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
L F+SG+ P A ++ + GA R++ + LG K F A GFLR+R
Sbjct: 501 --LTFVSGITPTVANNIVTYRNQNGAFKNRRELLKVPKLGPKAFEQAAGFLRIRNGKNP- 557
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LD+T +HPESY + + +AK++
Sbjct: 558 --------LDNTAVHPESYAVVEAIAKDL 578
>gi|88703318|ref|ZP_01101034.1| S1 RNA binding domain protein [Congregibacter litoralis KT71]
gi|88702032|gb|EAQ99135.1| S1 RNA binding domain protein [Congregibacter litoralis KT71]
Length = 792
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 186/804 (23%), Positives = 319/804 (39%), Gaps = 154/804 (19%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + S+ AA+T+ ++D L+ P YK PKR TK +AGL
Sbjct: 81 KLTPELEASIRAADTKSRLED------LYLP----------YK-PKRRTKALIAREAGLE 123
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA--MFNSSQAVLQGARHM 283
+A L +P+ PE A F A F+SS+AVL GA+ +
Sbjct: 124 PLADAL-------------------LANPELVPEVEAEAFLNADEGFDSSKAVLDGAKQI 164
Query: 284 A----AVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRK 339
A + + +R+++ + + A V + +G D F + LR
Sbjct: 165 LMERFAEDANLLDRLRQFLGAEGLLAARVISGKEKEGAKFSDYFEH--------TEALRS 216
Query: 340 FEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLF---SDCKEHYLSDGVSKSAQLWNDQR 395
+ L + + E +L + I+L PE+S + S ++ D + A W
Sbjct: 217 VPSHRALAMFRGRNEGILTLDIRLTPEESSSDAHPCQSMIAAYWKIDDRGRPADKW---- 272
Query: 396 ELILKDALDNFLLPSMVKEARSL-MSGRAKSWLLM---EYGKALWNKVSVGPYQRKDNDI 451
L +V+ S+ ++ +S LLM E +A KV + D+
Sbjct: 273 ------------LAEVVRWTWSVKLASHIQSDLLMQLRENAEAEAIKV----FASNLKDL 316
Query: 452 TPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQ 510
A P+V PG + ++D++G++VD + + +
Sbjct: 317 LLAAPAGPKV-TMGLDPGLRTGVKVAVVDATGKLVD----------QGTIYPTPPQNKTR 365
Query: 511 ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI--VYG 568
E M + H V L ++ S + D + + ++ EHP +LS+ V
Sbjct: 366 EAAATLMTMIRRHSVELISIGNGTGSRETDRF--VADVLSEHP--------DLSVQRVVV 415
Query: 569 DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPL 628
+E+ +Y S +++ + P ++ AV++ R LQ+PLA + + + S +
Sbjct: 416 NEAGASIYSASELAAREFPDVDVTIRGAVSIARRLQDPLAELVKI-----DPQSIGVGQY 470
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLV 688
++ ++ + + V+ D N VG+DIN A L +SGL R A ++
Sbjct: 471 QHDVSQLQLGRQLNAVVEDCVNAVGVDINTA-----SGPLLTRVSGLSQRIAENIVALRD 525
Query: 689 RAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLA 748
G TRK + G+G K + + GFLRV G+ + LD + +HPESYGL
Sbjct: 526 SQGPFSTRKALMNVSGMGAKTYQQSAGFLRVM-DGE--------NPLDASAVHPESYGLV 576
Query: 749 QELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYL 808
+E+AKE R++ + D L+ ++++ + T+
Sbjct: 577 EEIAKE-NGRELRSLIGDGP---------------FLRAVNAEKYVTDVV---GLPTIKD 617
Query: 809 IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLES 868
I EL +D R ++K I+ D + EG V T + V +
Sbjct: 618 ILGELEKPGRDPRPEFKTAKLQAGVEKITDLKPDMVLEGTVTNVT--SFGAFVDVGVHQD 675
Query: 869 GLAGM-LMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQ 927
GL + M E + D RD GDI+T K+ SI R +V L R S+ + Q
Sbjct: 676 GLVHISAMAEKFVKDPRDVA-----KAGDIVTVKVMSIDVERKRVGLSMRLSDSAEDSQQ 730
Query: 928 HCQNLDPYYHEER-SSRQSEQEKA 950
DP R +++S +KA
Sbjct: 731 -----DPGQRRSRPEAKRSHDKKA 749
>gi|317474257|ref|ZP_07933533.1| hypothetical protein HMPREF1016_00512 [Bacteroides eggerthii
1_2_48FAA]
gi|316909567|gb|EFV31245.1| hypothetical protein HMPREF1016_00512 [Bacteroides eggerthii
1_2_48FAA]
Length = 711
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/551 (22%), Positives = 224/551 (40%), Gaps = 92/551 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L L++ +P PE+ A+ F
Sbjct: 107 KPKRKTRAEAARQKGL-----------EPLATILMLQR------EPH--PEQRAAGFVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ L+GAR + A ++S R +R+ F AV++ + + +
Sbjct: 148 DVKDADDALKGARDIIAEQVSENERARNTLRNTFARQAVLTAKVVKGKEEEGAKYRDYFD 207
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ L++ + L I++AE E +L+V+I P D +C E L +S
Sbjct: 208 CS----ESLKRCSSHRLLAIRRAETEGVLKVSIS-PNDE------ECMER-LERQFVRSN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
Q ++DA L PS+ E + RA + + + L + P +K
Sbjct: 256 NACGKQVAEAVQDAYKRLLKPSIETEFAAQSKERADDEAIRVFAENLRQLLLASPLGQK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + V LD+ G + L ++N+
Sbjct: 315 -----------RVMG--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVN 351
Query: 508 NDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
+E +L K + ++ + +G N + + +D F + R E+
Sbjct: 352 QSKEAFAKLQKMIEAYKIEAIAIG--NGTASRETED-----FLKRQTFNR-------EVQ 397
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
I E +Y S+I+ D+ P V+ AV++ R L +PLA + + + S
Sbjct: 398 IFIVSEQGASIYSASKIARDEFPEYDVTVRGAVSIARRLMDPLAELVKI-----DPKSIG 452
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+ ++ + + ++Q + + N VG+++N A L +ISGLGP+ A ++
Sbjct: 453 VGQYQHDVDQSKLKKSLDQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQLAQNIV 507
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
GA +RK+ + +G K F GFLR+ + LD+T +HPES
Sbjct: 508 NYRAENGAFSSRKELMKVPRMGAKAFEQCAGFLRIPDAKNP---------LDNTAVHPES 558
Query: 745 YGLAQELAKEV 755
Y + +++AK++
Sbjct: 559 YHIVEQMAKDL 569
>gi|15672267|ref|NP_266441.1| hypothetical protein L84502 [Lactococcus lactis subsp. lactis
Il1403]
gi|385829856|ref|YP_005867669.1| hypothetical protein CVCAS_0270 [Lactococcus lactis subsp. lactis
CV56]
gi|12723148|gb|AAK04383.1|AE006266_2 hypothetical protein L84502 [Lactococcus lactis subsp. lactis
Il1403]
gi|326405864|gb|ADZ62935.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 712
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 146/680 (21%), Positives = 271/680 (39%), Gaps = 143/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ E + I D D L +R
Sbjct: 31 VPFIARYRKEATGSL--------------DEVE----------IKKIIDEDNLLTKLSER 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+A+ S + EE + L DS+ + AAE EV+D L+ P
Sbjct: 67 KTAVLS----KIEELGK-------------LTDSLKAQILAAEKLTEVED------LYLP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK KR TK + + GL+ +A +S L
Sbjct: 104 ----------YKE-KRRTKATIAKENGLFPLAQLIVKNSANL------------------ 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A F F S Q L+GA + + IS + +R ++ +N+++++ D
Sbjct: 135 --EEEAEKFVNENFTSPQKALEGAVDILSEAISEDARLRSWLTGEIKNNSLLTSSLKKD- 191
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
A+D F EK + + + + L + + E+ +L V + ED + + F+
Sbjct: 192 --AVDEKQVFQMYYEFSEK-VSELPNYRVLALNRGEKLGILSVKFENNEDKILRYFA--- 245
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
++ A N ++ +KDA+ L+P+M + R+ ++ +A++ + +G+ L
Sbjct: 246 --------ARFAAQNNPMMQVAIKDAVKKKLIPAMERSIRTELTEKAEASAIEVFGENLK 297
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
N + V P + + + + P + ++D +G+++ + T +
Sbjct: 298 NLLLVAPLKGR--------------VVMGFDPAYRTGAKLAIVDETGKLL--MTTVIYPV 341
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ N K D L KF+ ++ +++ +G N + + + + K E + D
Sbjct: 342 KPANAGQIAQAKKD---LAKFIREYGVNMIAIG--NGTASRESESFVAEVLK--ENNFSD 394
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
V + V ES +Y S ++ ++ P + A+++ R LQ+PLA + +
Sbjct: 395 VYY-------VIVSESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEP 447
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
+ ++ E LT + +D + ++ + L ++GL
Sbjct: 448 KAIGVGQYQHDVSEKKLTEN----------LDFVVETVVNQVGVNVNTASPSLLSHVAGL 497
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ + GA+ TR + LG K F A GFLR+ + L
Sbjct: 498 NKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLRIPEGK---------NFL 548
Query: 736 DDTRIHPESYGLAQELAKEV 755
D+T +HPESY + ++L E+
Sbjct: 549 DNTGVHPESYKVTEQLLAEI 568
>gi|52843030|ref|YP_096829.1| transcription accessory protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378778715|ref|YP_005187157.1| transcription accessory protein [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52630141|gb|AAU28882.1| transcription accessory protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364509533|gb|AEW53057.1| transcription accessory protein [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 789
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 137/636 (21%), Positives = 261/636 (41%), Gaps = 101/636 (15%)
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+Q R A + Y + +E I R ++L + +S+ AAET+ ++D+ L +
Sbjct: 53 VQLRFLAERLIYLRELDERRTVILQSIRE--QEKLTPELEQSILAAETKTRLEDLYLPY- 109
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
RPKR TK +AGL +A +
Sbjct: 110 ----------------RPKRRTKAQIAIEAGLEPLAHAL-------------------WK 134
Query: 253 DPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST 310
DP PEE AS F A ++QA L GARH+ + + + +R + +V +
Sbjct: 135 DPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELINELREYLWQHGIVKS 194
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
+ F + + + ++K + L + + E +LQV++ LP+ N
Sbjct: 195 VGNSTKKDQANKFSDY----FDYSEAIKKIPSHRALALFRGRREGILQVSLVLPDQDAN- 249
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
Y + V+ + + QR+ D +L+ + V+ + L+
Sbjct: 250 --------YGENKVAAYFNVTDRQRKA------DGWLIDT-VRMTWKIKLFTKLELELLT 294
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLF 489
+ + ++ ++ + + D+ A P+V PG + V++D++G+++D +
Sbjct: 295 RLREIADEEAIKVFSKNLRDLLLAAPAGPQV-TIGLDPGIRTGVKVVVVDATGKLLD--Y 351
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
+ QN Q L K +Q +++ +G N + + + + + KM
Sbjct: 352 SVIFPFAPQNEWHQSIAD-----LAKLAAKYQVNLISIG--NGTGSRETERLVADLIKMY 404
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
+ +L+ + E+ +Y S I++++ P +++ AV++ R LQ+PLA
Sbjct: 405 PDL---------KLTKIIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAE 455
Query: 610 VATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
+ + E S + ++ + + ++ V+ D N VG+DIN A A L
Sbjct: 456 LVKI-----EAKSIGVGQYQHDVNQAKLARCLDGVVEDCVNAVGVDINTA-----SAALL 505
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
ISGL A ++ + GA R H +G+K F A GFLR+ A
Sbjct: 506 SHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNIHRMGEKAFQQAAGFLRIMNGDNA---- 561
Query: 730 QFIDLLDDTRIHPESYGLAQELA--KEVYNRDIEGD 763
LD + +HPE+Y L +++ K+V ++I G+
Sbjct: 562 -----LDASCVHPEAYPLVEKIISDKKVSIKEIIGN 592
>gi|383753136|ref|YP_005432039.1| putative transcriptional accessory protein [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381365188|dbj|BAL82016.1| putative transcriptional accessory protein [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 733
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 184/851 (21%), Positives = 341/851 (40%), Gaps = 172/851 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE +L D+ RT L++R
Sbjct: 37 VPFIARYRKEATGAL-------------EDEQLRT---------------------LEER 62
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L++ K R EE +I ++ +L ++L +I+K+ + E E +L+ P
Sbjct: 63 LAYLRNLVK-RQEEILAKIEEQGKL--TEELRTAIAKAQKLQELE----------DLYLP 109
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR T+ + GL +A Q+ LE+
Sbjct: 110 ----------YKQKKR-TRAQIARERGLEPLA------------QMMLEQ-----AKISG 141
Query: 257 TPEEMASNFKCAMFNSSQA--VLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
TP + A+ F A + A L GA + A I + +R +RS +N + T
Sbjct: 142 TPLDEAAGFIDAEKDVPTADDALAGAMDITAEVIMEDAKLRAAMRSRLWNNGHMETELVE 201
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFS 373
D + A + F + L + + L I + E + L+V + + ED LN++F
Sbjct: 202 DAEEA-EVFAMYKDYSEL----IHTLPSHRILAINRGEAKGCLKVHVTIDTEDCLNRIFR 256
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
+SK WN+ +++D L P++ +E RS ++ A++ + +G
Sbjct: 257 R---------ISKQPSPWNETLRAVIEDGWKRLLFPALEREVRSQLTEEAEAQAIKIFGV 307
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L + P + VL PG + ++D++G V+D G
Sbjct: 308 NLKQLLLQAPL------------SGHTVLG--LDPGYRTGCKMAVVDATGHVLD---HGV 350
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+ Q + +K + +L + H ++ +G S + + +++ ++
Sbjct: 351 I----QVTQSDGAKAAAAKTVLGLIKKHDITLISIGNGTASY-----ETEQFTAQLIADN 401
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
+++ + + +E+ +Y S ++ ++LP ++ AV++ R +Q+PLA +
Sbjct: 402 ------KLNSVHYLITNEAGASVYSASALAKEELPQYDVTIRGAVSIARRIQDPLAELVK 455
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ ++ + E ++ + N VG+D+N A A
Sbjct: 456 IDPKAIGVGQ---------YQHDVNQKELGATLDATIESTVNHVGVDLNTA-----SSAL 501
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L+ I+G+ A ++ G +RK+ + LG F GFLR+ A
Sbjct: 502 LKHIAGINATIAKNIVAYRNENGIFTSRKELLKVPRLGPAAFTQCAGFLRI-----AGGK 556
Query: 729 SQFIDLLDDTRIHPESYGLAQE-LAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
S LD+T +HPESY LA++ LA+ ++ DL+ D+DAL M K+
Sbjct: 557 SP----LDNTSVHPESYQLAEKLLARLGFSL---ADLS-DKDALAMLAA---------KS 599
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L D K+ + T+ I L+ +D R P + +S + EG
Sbjct: 600 KLADCAKLAKELDAGELTVKDILAALVKPGRDPREDLPAPLTRQAIVKLSD-----IKEG 654
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+++ TVR + A + AG++ + S L D L GDI+ + S+ +
Sbjct: 655 SIMRGTVRNITDFGAFVDIGLKTAGLIHISEMSKKRIKHPL-DVLAVGDIVKVMVISVDE 713
Query: 908 NRYQVFLVCRE 918
R ++ L ++
Sbjct: 714 KRNRIGLSLKQ 724
>gi|218130719|ref|ZP_03459523.1| hypothetical protein BACEGG_02310 [Bacteroides eggerthii DSM 20697]
gi|217987063|gb|EEC53394.1| Tex-like protein N-terminal domain protein [Bacteroides eggerthii
DSM 20697]
Length = 711
Score = 84.0 bits (206), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 123/551 (22%), Positives = 224/551 (40%), Gaps = 92/551 (16%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L L L++ +P PE+ A+ F
Sbjct: 107 KPKRKTRAEAARQKGL-----------EPLATILMLQR------EPH--PEQRAAGFVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ L+GAR + A ++S R +R+ F AV++ + + +
Sbjct: 148 DVKDADDALKGARDIIAEQVSENERARNTLRNTFARQAVLTAKVVKGKEEEGAKYRDYFD 207
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ L++ + L I++AE E +L+V+I P D +C E L +S
Sbjct: 208 CS----ESLKRCSSHRLLAIRRAETEGVLKVSIS-PNDE------ECVER-LERQFVRSN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
Q ++DA L PS+ E + RA + + + L + P +K
Sbjct: 256 NACGKQVAEAVQDAYKRLLKPSIETEFAAQSKERADDEAIRVFAENLRQLLLASPLGQK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RV+ PG + V LD+ G + L ++N+
Sbjct: 315 -----------RVMG--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVN 351
Query: 508 NDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS 564
+E +L K + ++ + +G N + + +D F + R E+
Sbjct: 352 QSKEAFAKLQKMIEAYKIEAIAIG--NGTASRETED-----FLKRQTFNR-------EVQ 397
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
I E +Y S+I+ D+ P V+ AV++ R L +PLA + + + S
Sbjct: 398 IFIVSEQGASIYSASKIARDEFPEYDVTVRGAVSIARRLMDPLAELVKI-----DPKSIG 452
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+ ++ + + ++Q + + N VG+++N A L +ISGLGP+ A ++
Sbjct: 453 VGQYQHDVDQSKLKKSLDQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQLAQNIV 507
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
GA +RK+ + +G K F GFLR+ + LD+T +HPES
Sbjct: 508 NYRAENGAFSSRKELMKVPRMGAKAFEQCAGFLRIPDAKNP---------LDNTAVHPES 558
Query: 745 YGLAQELAKEV 755
Y + +++AK++
Sbjct: 559 YHIVEQMAKDL 569
>gi|365904843|ref|ZP_09442602.1| transcriptional accessory protein [Lactobacillus versmoldensis KCTC
3814]
Length = 729
Score = 84.0 bits (206), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 183/850 (21%), Positives = 334/850 (39%), Gaps = 171/850 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE +L +EV N +D + ++ L Q+R
Sbjct: 42 VPFIARYRKERTGTL------DEVAIRNIED-----------------EANRLMKLNQRR 78
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ L ++ DE +L + + LE A ++V+D L+ P
Sbjct: 79 QDVL-------------KLIDE-----QGKLTPELKQDLEKATVLQQVED------LYLP 114
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + +AGL E +K+ + + GL EK + K+
Sbjct: 115 ----------YKQ-KRRTKATIAKEAGL-EPLAKWLLTFPETGLD---EKAKTYVATDKD 159
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
P+ AV G + A S R+++R N ++++ +G
Sbjct: 160 LPD-------------LDAVWAGVHEILAETFSERADFREWIRQYTWQNGILTSKVKRNG 206
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ Q + ++ L++ + L I + E+EK+L V I + D + K
Sbjct: 207 KEKDE--QQVYATYYDFDQALKQIPPYRVLAINRGEKEKILTVGIDVETDQIFK------ 258
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
H + V K ++ + +DA FL P++ +E R +S +A + + +G L+
Sbjct: 259 -HANTRLVGKRQGPAVNKIQAAFEDAYKRFLGPAIERELRHQLSDKADNHAIQVFGSNLY 317
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
+ + P + K + + P + ++D +G F +
Sbjct: 318 HLLMQAPLKGK--------------VVMGFDPAYRTGCKLAIMDKNGR-----FLAKQVI 358
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ + + + + +Q ++ +G N + + ++ I K ++ HP
Sbjct: 359 YPHKPANSKQRAAAGTEFKQLLDQYQVEMIAIG--NGTASRESEEFVSEILKTLD-HP-- 413
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
+ V +E+ +Y S + + + A+++GR LQ+PLA + +
Sbjct: 414 -------VYYVIVNEAGASVYSASANARKEFADLHVEERSAISIGRRLQDPLAELIKIYP 466
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP--LQFIS 673
+ ++ E L DE+ +++V+ NQVG+++N A +P L IS
Sbjct: 467 KAIGVGQYQHDVPEKSL--DEQ---LDRVVETAVNQVGVNLNTA-------SPELLTHIS 514
Query: 674 GLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
GL A ++ + GA R+D LG K + +VGFLR+ +
Sbjct: 515 GLTATTANNIVKFRNENGAFNKRQDLKAVPRLGPKAYQQSVGFLRIISGNEP-------- 566
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA-----LEMAIEHVRDRPDLLKTY 788
LD+T IHPESY + ++L K DL +A L+ +E
Sbjct: 567 -LDNTDIHPESYAVTRKLLK---------DLGATSEAIGKTELQQKLEQ----------- 605
Query: 789 LLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGR 848
LD+ ++ E + TL I L +D R+ P ++ T D L G
Sbjct: 606 -LDQTTYSQQLEIGKSTLADIIAGLSKPGRDLRDSMPAPLLRQDVL-----TMDDLKPGM 659
Query: 849 VVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKN 908
+Q TVR V A + G++ +D + S+ S ++ GDI+T + + KN
Sbjct: 660 ELQGTVRNVIDFGAFVDIGVKQDGLVHISQLADHYV-SDPSTEVTIGDIVTVWVLDVDKN 718
Query: 909 RYQVFLVCRE 918
R ++ L R+
Sbjct: 719 RNRIQLTMRQ 728
>gi|281490827|ref|YP_003352807.1| transcription accessory protein (S1 RNA binding domain)
[Lactococcus lactis subsp. lactis KF147]
gi|281374585|gb|ADA64105.1| Transcription accessory protein (S1 RNA binding domain)
[Lactococcus lactis subsp. lactis KF147]
Length = 712
Score = 84.0 bits (206), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 146/680 (21%), Positives = 271/680 (39%), Gaps = 143/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ E + I D D L +R
Sbjct: 31 VPFIARYRKEATGSL--------------DEVE----------IKKIIDEDNLLTKLSER 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+A+ S + EE + L DS+ + AAE EV+D L+ P
Sbjct: 67 KTAVLS----KIEELGK-------------LTDSLKAQILAAEKLTEVED------LYLP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK KR TK + + GL+ +A +S L
Sbjct: 104 ----------YKE-KRRTKATIAKENGLFPLAQLIVKNSANL------------------ 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A F F S Q L+GA + + IS + +R ++ +N+++++ D
Sbjct: 135 --EEEAEKFVNENFTSPQKALEGAVDILSEAISEDARLRSWLTGEIKNNSLLTSSLKKD- 191
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
A+D F EK + + + + L + + E+ +L V + ED + + F+
Sbjct: 192 --AVDEKQVFQMYYEFSEK-VSELPNYRVLALNRGEKLGILSVKFENNEDKILRYFA--- 245
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
++ A N ++ +KDA+ L+P+M + R+ ++ +A++ + +G+ L
Sbjct: 246 --------ARFAAQNNPMMQVAIKDAVKKKLIPAMERSIRTDLTEKAEASAIEVFGENLK 297
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
N + V P + + + + P + ++D +G+++ + T +
Sbjct: 298 NLLLVAPLKGR--------------VVMGFDPAYRTGAKLAIVDETGKLL--MTTVIYPV 341
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ N K D L KF+ ++ +++ +G N + + + + K E + D
Sbjct: 342 KPANAGQIAQAKKD---LAKFIREYGVNMIAIG--NGTASRESESFVAEVLK--ENNFSD 394
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
V + V ES +Y S ++ ++ P + A+++ R LQ+PLA + +
Sbjct: 395 VYY-------VIVSESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEP 447
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
+ ++ E LT + +D + ++ + L ++GL
Sbjct: 448 KAIGVGQYQHDVSEKKLTEN----------LDFVVETVVNQVGVNVNTASPSLLSHVAGL 497
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ + GA+ TR + LG K F A GFLR+ + L
Sbjct: 498 NKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLRIPEGK---------NFL 548
Query: 736 DDTRIHPESYGLAQELAKEV 755
D+T +HPESY + ++L E+
Sbjct: 549 DNTGVHPESYKVTEQLLAEI 568
>gi|295134296|ref|YP_003584972.1| RNA binding protein with S1 RNA-binding domain [Zunongwangia
profunda SM-A87]
gi|294982311|gb|ADF52776.1| putative RNA binding protein with S1 RNA-binding domain
[Zunongwangia profunda SM-A87]
Length = 708
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 216/508 (42%), Gaps = 90/508 (17%)
Query: 262 ASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTPDGDSA 319
A+ F NS L+GA+H+ A I+ VRK +R ++ A +S+ +
Sbjct: 139 ATKFVKNKINSVDEALEGAKHIIAEWINENQYVRKQIRKLYSRRAEISSKVVKAKSIEEE 198
Query: 320 IDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHY 379
F Q+ +W + L++ ++L I + ++E +L++ I++ + KL + E
Sbjct: 199 AQKFQQY--FEW--NESLKRIPSHRFLAIYRGDKEGILKLKIEVDKIEALKLIT---ESI 251
Query: 380 LSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKV 439
+ + SKSA L + DA L PS E + +A + + L +
Sbjct: 252 IKNRNSKSAALIEEAA----TDAYSRLLKPSFFTEFLNETKLKADEEAIKVFSLNLEQLL 307
Query: 440 SVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
P K R+LA PG K V LD +G++ +
Sbjct: 308 LAPPLGEK------------RILAI--DPGFKSGCKVVCLDENGKLEH--NENIYPHPPK 351
Query: 499 NVRDQQSKKNDQERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVG 557
N R +KK +K +++ H+ + +G S + E+ + +
Sbjct: 352 NERSLAAKK------IKSLVNAHRIKAISIGNGTAS-------------RETEQFIKSIP 392
Query: 558 HEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL---- 613
+ D + + +E+ +Y S+++ ++ P V+ AV++GR L +PLA + +
Sbjct: 393 FDRD-IEVYVVNEAGASVYSASKVAREEFPNYDITVRGAVSIGRRLSDPLAELVKIDPKS 451
Query: 614 CGPGR------EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA 667
G G+ +IL K ++ ++ N++G+++N A +E
Sbjct: 452 IGVGQYQHEVDQILLKK---------------RLDTTVMSTVNKIGINLNTA-SKEL--- 492
Query: 668 PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAAS 727
L ++SGLGP A ++ + GA +RK+ + LG K F + GFLR+R S
Sbjct: 493 -LSYVSGLGPSLAENIIKIRTENGAFQSRKELLKVPRLGAKAFEQSAGFLRIRNSKNP-- 549
Query: 728 SSQFIDLLDDTRIHPESYGLAQELAKEV 755
LD++ +HPESY L ++A+++
Sbjct: 550 -------LDNSAVHPESYHLVTKMAEDL 570
>gi|171780107|ref|ZP_02921011.1| hypothetical protein STRINF_01895 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281455|gb|EDT46890.1| Tex-like protein N-terminal domain protein [Streptococcus
infantarius subsp. infantarius ATCC BAA-102]
Length = 710
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 175/821 (21%), Positives = 324/821 (39%), Gaps = 197/821 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K +L+I + I + L+L + IPFIA YRKE +L +EV
Sbjct: 8 KIAQELTIKENQITKVLELTS-EGNTIPFIARYRKEMTGNL------DEVQ--------- 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI D DK L +RK+ + S + EE+ + L
Sbjct: 52 ---------IKAIIDFDKSMTALAERKATVLS----KIEEQGK-------------LTAE 85
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ K++EAAE +V++ L + + KR TK + +AGL+ +A
Sbjct: 86 LKKAIEAAEKLADVEEFYLPY-----------------KEKRRTKATIAREAGLFPLA-- 126
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+L LQ K + E+ A F C F ++ + GA + S
Sbjct: 127 ------RLILQ------------NKASLEKEAQAFICDGFETADKAIAGACEILIESFSE 168
Query: 291 EPCVRKYVRS---IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL 347
+ +R +V + + T D ++ F+ + + K + + L
Sbjct: 169 DNRLRSWVYNEIWSYSSVVSSVKDETADDKKTFQIYYDFS-------EKVSKMQGYRILA 221
Query: 348 IQKAEEEKLLQVTIKLPEDSLNKLFSD---CKEHYLSDGVSKSAQLWNDQRELILKDALD 404
+ + E+ +L+V D + + + + Y+ D +SK+ +
Sbjct: 222 LNRGEKLGILKVGFDHNTDKMIRFMASRFKNRNAYIDDVISKT---------------IK 266
Query: 405 NFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC 464
++P+M + S ++ A+ + + + L N + V P + K +
Sbjct: 267 KKIVPAMERRIHSELTESAEDGAIELFSENLRNLLLVSPLKGK--------------MVL 312
Query: 465 CWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
+ P + ++D +G+++ + SQ + +QSKK+ L + + +
Sbjct: 313 GFDPAFRTGAKLAVVDQTGKLMTTQVIYPVAPASQ-AKIEQSKKD----LAELISSYGIE 367
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
++ +G S S E V + ++S V +ES +Y S ++
Sbjct: 368 IIAIGNGTASRES-------------EAFVAQVLKDFPDVSYVIVNESGASVYSASELAR 414
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDE 636
+ P + A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 415 HEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLAENLDF----- 469
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTR 696
V+ V NQVG++IN A A L +SGL + ++ + G I +R
Sbjct: 470 -------VVDTVVNQVGVNINTA-----SPALLSHVSGLNKTISENIVKYRDEHGCISSR 517
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY 756
++ LG K F A GFLR+ + ++LD+T +HPESY + L KE+
Sbjct: 518 EEIKKVPRLGAKAFEQAAGFLRIPGAK---------NILDNTGVHPESYKAVERLLKEL- 567
Query: 757 NRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHG 816
D+ D +D+ + ++ V + D+ +T L +ETL I +L+
Sbjct: 568 ------DITDLDDSAKAKLQAVSVK-DMAETIGLG-----------QETLKDIIADLLKP 609
Query: 817 FQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV 857
+D R+ ++ P ++ IS L G+ ++ TVR V
Sbjct: 610 GRDLRDDFEAPVLRQDVLDISD-----LEIGQKLEGTVRNV 645
>gi|229015646|ref|ZP_04172635.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus AH1273]
gi|228745646|gb|EEL95659.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus AH1273]
Length = 655
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 205/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P E A F S++ LQGA+ + A +S R ++R+ ++S+
Sbjct: 72 KENPAEKAMEFVDGEKEVESAEDALQGAQDIIAELVSDNASYRSWIRNTTFRKGIMSSSV 131
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + E+PL+K + L + + E+E +L+V++ P + +N+
Sbjct: 132 KDKEKDEKNIYEMY----YDYEEPLQKIVPHRVLAMNRGEKEDVLRVSVVTPTEEINQFL 187
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSA +L ++D + PS+ +E R ++ A+ + +
Sbjct: 188 H---KKMIRDEASKSAHYV----QLAIEDGYKRLIQPSIEREIRKELTETAEEQAIHIFS 240
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 241 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLSVVDDTGKVLNIDVIYP 287
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
+ ++ + +++L + +Q ++ +G S + E I +++
Sbjct: 288 HPPVRKYEDAK---------KKVLSIIDKYQVEMIAIGNGTASRET-----EEFIVDVLQ 333
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
RDV + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 334 NVKRDVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 386
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 387 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 432
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R + LG K + +GFLR+
Sbjct: 433 ALLQYVSGLSKTVAKNIVAKREEDGKFTKRTELKKIPRLGAKTYEQCIGFLRILEGANP- 491
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 492 --------LDRTGIHPEQY 502
>gi|414073584|ref|YP_006998801.1| Transcription accessory protein (S1 RNA binding domain)
[Lactococcus lactis subsp. cremoris UC509.9]
gi|413973504|gb|AFW90968.1| Transcription accessory protein (S1 RNA binding domain)
[Lactococcus lactis subsp. cremoris UC509.9]
Length = 713
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 144/680 (21%), Positives = 272/680 (40%), Gaps = 143/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ E + I D D L +R
Sbjct: 31 VPFIARYRKEATGSL--------------DEVE----------IKKIIDEDNLLTKLSER 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+A+ S + EE + L DS+ + AAE EV+D L+ P
Sbjct: 67 KTAVLS----KIEELGK-------------LTDSLKTQILAAEKLTEVED------LYLP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK KR TK + + GL+ +A ++ L
Sbjct: 104 ----------YKE-KRRTKATIAKENGLFPLAQLIVKNAANL------------------ 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A F F ++Q L+GA + + IS + +R ++ +N+++++ D
Sbjct: 135 --EEEAEKFVNENFTTAQKALEGAVDILSEAISEDARLRSWLTGEIKNNSLLTSSLKKD- 191
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
A+D F EK + + + + L + + E+ +L V + ED + + F+
Sbjct: 192 --AVDEKQVFQMYYEFSEK-VSELPNYRVLALNRGEKLGILSVKFENNEDKILRYFA--- 245
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
++ A N ++ +KDA+ L+P+M + R+ ++ +A++ + +G+ L
Sbjct: 246 --------ARFAAQNNPMMQVAIKDAVKKKLIPAMERSIRTELTEKAEASAIEVFGENLK 297
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
N + V P + + + + P + ++D +G+++ + T +
Sbjct: 298 NLLLVAPLKGR--------------VVMGFDPAYRTGAKLAIVDETGKLL--MTTVIYPV 341
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ N K D L KF+ ++ +++ +G N + + + + K E + D
Sbjct: 342 KPANAGQIAQAKKD---LAKFIREYGVNMIAIG--NGTASRESESFVSEVLK--ENNFSD 394
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
V + V ES +Y S ++ ++ P + A+++ R LQ+PLA + +
Sbjct: 395 VYY-------VIVSESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEP 447
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
+ ++ E LT + +D + ++ + L ++GL
Sbjct: 448 KAIGVGQYQHDVSEKKLTEN----------LDFVVETVVNQVGVNVNTASPSLLSHVAGL 497
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ + GA+ TR + LG K F A GFLR+ + L
Sbjct: 498 NKSLAQNVVKYREENGALKTRNELKKVPRLGAKAFEQAAGFLRIPEGK---------NFL 548
Query: 736 DDTRIHPESYGLAQELAKEV 755
D+T +HPESY + ++L E+
Sbjct: 549 DNTGVHPESYKVTEQLLTEI 568
>gi|195572936|ref|XP_002104451.1| GD18443 [Drosophila simulans]
gi|194200378|gb|EDX13954.1| GD18443 [Drosophila simulans]
Length = 994
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 179/419 (42%), Gaps = 50/419 (11%)
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
+R + Q L I + E+ K L V ++ + L + Y++ G+ + +RE
Sbjct: 419 VRSIKPYQMLAINRGEKHKFLSVKLETNDYLKRDLMRYITDQYMNQGLQ-----YPLRRE 473
Query: 397 LI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
+ L++ L P M ++ R+ + +A + + K L + + P +
Sbjct: 474 VFTKSLEECYSKKLQPLMCRQIRADLKEKATKAAIDVFAKNLKQLLLMSPLK-------- 525
Query: 454 DEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERL 513
R+L PG + L S E DVL TG + +K++ +++L
Sbjct: 526 ----GERILG--IDPGFTNGCKLALIS--ETADVLDTGVIYPHGA----MSNKRDAEQKL 573
Query: 514 LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLP 573
++ + DH ++ LG +C + + + H + + SIV +E+
Sbjct: 574 VQLLSDHNCKIIALGN-GTACRETEHWLTGMF------HAGVLDSRIIRYSIV--NENGA 624
Query: 574 RLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLT 633
+Y S +++ + P N + AV++ R L +PL+ + + ++ E LT
Sbjct: 625 SIYSCSDVAAKEFPKMDTNERSAVSIARRLNDPLSEYVKIEPRHLGVGMYQHDVSEKILT 684
Query: 634 PDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAI 693
+ V+ + + VG+D+N A + L+ I+GL +KA + + G
Sbjct: 685 -----ASLNDVVSECVSYVGVDLNTA-----SLSVLKHIAGLSEKKAEKIIEHRTQKGPF 734
Query: 694 FTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA 752
TRKD ++ +G+K FV GF+R+ + Q + LD T +HPESY + + LA
Sbjct: 735 KTRKDLLSVRSIGEKSFVQCAGFVRIE---PLSVGGQIKNPLDCTWVHPESYNVVESLA 790
>gi|374672351|dbj|BAL50242.1| hypothetical protein lilo_0240 [Lactococcus lactis subsp. lactis
IO-1]
Length = 712
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 146/680 (21%), Positives = 271/680 (39%), Gaps = 143/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ E + I D D L +R
Sbjct: 31 VPFIARYRKEATGSL--------------DEVE----------IKKIIDEDNLLTKLSER 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+A+ S + EE + L DS+ + AAE EV+D L+ P
Sbjct: 67 KTAVLS----KIEELGK-------------LTDSLKTQILAAEKLTEVED------LYLP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK KR TK + + GL+ +A +S L
Sbjct: 104 ----------YKE-KRRTKATIAKENGLFPLAQLIVKNSANL------------------ 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A F F S Q L+GA + + IS + +R ++ +N+++++ D
Sbjct: 135 --EEEAEKFVNENFTSPQKALEGAVDILSEAISEDARLRSWLTGEIKNNSLLTSSLKKD- 191
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
A+D F EK + + + + L + + E+ +L V + ED + + F+
Sbjct: 192 --AVDEKQVFQMYYEFSEK-VSELPNYRVLALNRGEKLGILSVKFENNEDKILRYFA--- 245
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
++ A N ++ +KDA+ L+P+M + R+ ++ +A++ + +G+ L
Sbjct: 246 --------ARFAAQNNPMMQVAIKDAVKKKLIPAMERSIRTELTEKAEASAIEVFGENLK 297
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
N + V P + + + + P + ++D +G+++ + T +
Sbjct: 298 NLLLVAPLKGR--------------VVMGFDPAYRTGAKLAIVDETGKLL--MTTVIYPV 341
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ N K D L KF+ ++ +++ +G N + + + + K E + D
Sbjct: 342 KPANAGQIAQAKKD---LAKFIREYGVNMIAIG--NGTASRESESFVAEVLK--ENNFSD 394
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
V + V ES +Y S ++ ++ P + A+++ R LQ+PLA + +
Sbjct: 395 VYY-------VIVSESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEP 447
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
+ ++ E LT + +D + ++ + L ++GL
Sbjct: 448 KAIGVGQYQHDVSEKKLTEN----------LDFVVETVVNQVGVNVNTASPSLLSHVAGL 497
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ + GA+ TR + LG K F A GFLR+ + L
Sbjct: 498 NKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLRIPEGK---------NFL 548
Query: 736 DDTRIHPESYGLAQELAKEV 755
D+T +HPESY + ++L E+
Sbjct: 549 DNTGVHPESYKVTEQLLAEI 568
>gi|386831647|ref|YP_006238301.1| putative RNA-binding protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|417799469|ref|ZP_12446609.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21310]
gi|418655914|ref|ZP_13217746.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-105]
gi|334273800|gb|EGL92139.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus 21310]
gi|375035300|gb|EHS28430.1| Tex-like protein N-terminal domain protein [Staphylococcus aureus
subsp. aureus IS-105]
gi|385197039|emb|CCG16684.1| putative RNA-binding protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
Length = 716
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 144/669 (21%), Positives = 271/669 (40%), Gaps = 107/669 (15%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
EE A F S + ++GA+ + A +IS P R + V+++ + +
Sbjct: 139 EEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKILKDMYHQGVLTSSKKKNAED 198
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEH 378
F + + +P+++ + + L + + E+EK+L V + ++ ++
Sbjct: 199 EKGIFEMY----YKYSEPIKRIANHRVLAVNRGEKEKVLSVKFEFDTTTVEDFI--ARQE 252
Query: 379 YLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNK 438
+ V++S L +KD+L ++PS+ +E + ++ +A++ + + + L N
Sbjct: 253 INHNNVNRSYILEA------IKDSLKRLIVPSIEREIHADLTEKAENHAIDVFSENLRNL 306
Query: 439 VSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
+ P + K + A R C P TF+ G +
Sbjct: 307 LLQPPMKGKQ---ILGVDPAFRT-GCKLAVINPFGTFIA------------KGVIYPHPP 350
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + ++K+ F+ + + V L A+ S + + + + ++++H V
Sbjct: 351 VSKKEAAEKD-------FVQMVKAYDVQLIAIGNGTASRETEHF--VADLIKKHQLPV-- 399
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----C 614
+ +E+ +Y S I+ D+ P + + AV++GR +Q+PL+ + +
Sbjct: 400 -----QFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSI 454
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G G+ LEN LT V+ NQVG+D+N A + LQ++SG
Sbjct: 455 GVGQYQHDVNQKALENALTF---------VVETAVNQVGVDVNTA-----SSSLLQYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L + A ++ GAI K+ LG K F ++GFLR+ +
Sbjct: 501 LSSQIAKNIIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEP--------- 551
Query: 735 LDDTRIHPESYGLAQEL-------AKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKT 787
LD+T IHPESY + +L ++ + ++ LN D E+AIE P
Sbjct: 552 LDNTSIHPESYKVTYQLLDKLGFGGNDLGSDALKAKLN-SLDMDELAIELQVGVPT---- 606
Query: 788 YLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
L+ IK K N+ D R++++ P + I + L EG
Sbjct: 607 --LEDIIKSLKAPNR----------------DPRDEFETPILKSDVLSI-----EDLKEG 643
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQK 907
+ TVR V A + G++ S + + + D + GDI+ I SI K
Sbjct: 644 MKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPM-DIVSVGDIVDVWIYSIDK 702
Query: 908 NRYQVFLVC 916
N+ +V L
Sbjct: 703 NKDKVSLTM 711
>gi|402571263|ref|YP_006620606.1| transcriptional accessory protein [Desulfosporosinus meridiei DSM
13257]
gi|402252460|gb|AFQ42735.1| transcriptional accessory protein [Desulfosporosinus meridiei DSM
13257]
Length = 722
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 148/677 (21%), Positives = 290/677 (42%), Gaps = 140/677 (20%)
Query: 270 FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA---VVSTCPTPDGDSAIDSFHQF 326
NS++ L GA + A I+ + +RK +R A V+ + S + ++ +
Sbjct: 150 VNSTEEALAGAMDIIAETIADDADLRKRIREQTFKTADLVAVAEAKKAEERSPFEMYYDY 209
Query: 327 AGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSK 386
+P+RK + L + + E+E+ L V ++ P D+++++ + Y+ G S
Sbjct: 210 -------REPVRKIPPHRVLALNRGEKEEFLSVRVETPSDTIHRII---EMKYVKTGQSA 259
Query: 387 SAQLWNDQRELILKDALDNF---LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+ L+ K ALD++ + PS+ +E R+ +S +A+ + + L + P
Sbjct: 260 A---------LVQKAALDSYKRLIEPSIEREVRAELSAQAEEQAIKVFAANLRQLLLQPP 310
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+ K + PG + + ++D +G++ V G + + +
Sbjct: 311 VRGK--------------MVLGLDPGFRTGCKWAIVDETGKLYQV---GVIYPHTGKGKR 353
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
+++K E L K + ++ ++ +G S + E++ +M++E V E
Sbjct: 354 EEAK----EILRKAIKEYGADIIAIGNGTAS-----RETEEVVAEMIQEDGIPV-----E 399
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
++V E+ +Y S+++ ++ P +++ AV++ R LQ+PLA + + G G+
Sbjct: 400 FTLV--SEAGASVYSASKLAGEEFPDFDLSLRSAVSIARRLQDPLAELVKIEPKAVGVGQ 457
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
+ LE L +G++E + N VG+D+N A + LQ+++GL P
Sbjct: 458 YQHDVQPKRLEESL-----HGVVESCV----NVVGVDLNTA-----SASLLQYVAGLKPA 503
Query: 679 KAASLQRSLVRAGAIFTRKD-FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
A ++ G FTR+D LG + ++ GF+R+ ++ L++
Sbjct: 504 VAKNIVAFRDEHGK-FTRRDQLKKIPRLGAQTYIQCAGFIRL---------PDGVNPLEN 553
Query: 738 TRIHPESYGLAQELAKEV--YNRDIEGDLNDDEDAL------EMA------IEHVRDRPD 783
T +HPESY LA+++ K + D+ L D + L E+A + VRD D
Sbjct: 554 TPVHPESYQLAEDILKSIGCTPVDLRERLTDVRNKLAVLNPNELAERFGAGVPTVRDILD 613
Query: 784 LLKTYLLDRHIKEKKRENKRETL--YLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE 841
L ++ + RE L L+R+++ H E
Sbjct: 614 AL----------QRPGRDPREDLPRPLLRKDITH------------------------ME 639
Query: 842 DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCK 901
D L EG +++ TVR V A + G++ SD + + + + GDI+ +
Sbjct: 640 D-LNEGMILEGTVRNVVDFGAFVDIGVKHDGLVHISQLSDKFIKHPM-EAVAVGDIVKVR 697
Query: 902 IKSIQKNRYQVFLVCRE 918
+ I K R +V L R+
Sbjct: 698 VIGIDKVRERVSLSMRD 714
>gi|148361144|ref|YP_001252351.1| transcription accessory protein [Legionella pneumophila str. Corby]
gi|296108478|ref|YP_003620179.1| transcriptional accessory protein [Legionella pneumophila 2300/99
Alcoy]
gi|148282917|gb|ABQ57005.1| transcription accessory protein [Legionella pneumophila str. Corby]
gi|295650380|gb|ADG26227.1| Transcriptional accessory protein [Legionella pneumophila 2300/99
Alcoy]
Length = 789
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 137/637 (21%), Positives = 264/637 (41%), Gaps = 103/637 (16%)
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+Q R A + Y + +E I R ++L + +S+ AAET+ ++D+ L +
Sbjct: 53 VQLRFLAERLIYLRELDERRTVILQSIRE--QEKLTPELEQSILAAETKTRLEDLYLPY- 109
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDEL- 251
RPKR TK Q+ ++ LE + L
Sbjct: 110 ----------------RPKRRTK--------------------AQIAIEAGLEPLAHALW 133
Query: 252 EDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
+DP PEE AS F A ++QA L GARH+ + + + +R + +V
Sbjct: 134 KDPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELINELREYLWQHGIVK 193
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
+ + F + + + ++K + L + + E +LQV++ LP+ N
Sbjct: 194 SVGNSTKKDQANKFSDY----FDYSEAIKKIPSHRALALFRGRREGILQVSLVLPDQDAN 249
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
Y + V+ + + QR+ D +L+ + V+ + L+
Sbjct: 250 ---------YGENKVATYFNVTDRQRKA------DGWLIDT-VRMTWKIKLFTKLELELL 293
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVL 488
+ + ++ ++ + + D+ A P+V PG + V++D++G+++D
Sbjct: 294 TRLREIADEEAIKVFSKNLRDLLLAAPAGPQV-TIGLDPGIRTGVKVVVVDATGKLLD-- 350
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
++ QN Q L K +Q +++ +G N + + + + + KM
Sbjct: 351 YSVIFPFAPQNEWHQSIAD-----LAKLAAKYQVNLISIG--NGTGSRETERLVADLIKM 403
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
+ +L+ + E+ +Y S I++++ P +++ AV++ R LQ+PLA
Sbjct: 404 YPDL---------KLTKMIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLA 454
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ + E S + ++ + + ++ V+ D N VG+DIN A A
Sbjct: 455 ELVKI-----EAKSIGVGQYQHDVNQAKLARCLDGVVEDCVNAVGVDINTA-----SAAL 504
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L ISGL A ++ + GA R + H +G+K F A GFLR+ A
Sbjct: 505 LSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKSIHRMGEKAFQQAAGFLRIMNGDNA--- 561
Query: 729 SQFIDLLDDTRIHPESYGLAQELA--KEVYNRDIEGD 763
LD + +HPE+Y L +++ K+V ++I G+
Sbjct: 562 ------LDASCVHPEAYPLVEKIISDKKVSIKEIIGN 592
>gi|160878496|ref|YP_001557464.1| RNA-binding S1 domain-containing protein [Clostridium
phytofermentans ISDg]
gi|160427162|gb|ABX40725.1| RNA binding S1 domain protein [Clostridium phytofermentans ISDg]
Length = 722
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 186/856 (21%), Positives = 342/856 (39%), Gaps = 180/856 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ND+ R+ + L + +L+ +K+
Sbjct: 31 IPFIARYRKEVTGSL-------------NDEVLRS----LSERLTYLRNLE------EKK 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
S L S EE+ + L + + +EAA T V+D L+ P
Sbjct: 68 ASVLASI-----EEQGK-------------LTEELKAQIEAAATLVVVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A ++++ + LE D + + KE
Sbjct: 104 -----------YRPKRRTRATIAKEKGLEPLAEII--IAQEISRDI-LELAEDYVSEEKE 149
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPTPD 315
+S++ + GA + A IS E R ++R + F + ++ S +
Sbjct: 150 V-------------SSAKDAVAGALDIIAESISDEADYRIHIRKLTFEEGSITSAAKDAE 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + +++++ + + K + L + + E EK L V I P + +
Sbjct: 197 AESVYELYYEYS-------EKISKVAGHRVLALNRGENEKFLTVKITAPTEKIM------ 243
Query: 376 KEHYLSDGVSKSAQ-LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
+YL V K ND + + D+ D + P++ +E R+ ++ +A+ ++ +G+
Sbjct: 244 --NYLKGKVIKRDNPHTNDYLVVAIADSYDRLIAPAIEREIRNDLTEKAEDGAIVVFGQN 301
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
L + P A VL W P + ++D++G+V+D
Sbjct: 302 LTQVLMQPPI------------AGQVVLG--WDPAFRTGCKLAVVDATGKVLD------- 340
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
T+ Q + + L K +Q ++ +G S S +II +++E
Sbjct: 341 TVVIYPTAPQNKVEEAKTVLKKLFKKYQITLISVGNGTASRES-----EQIIVDLLKEI- 394
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
+ +S V +E+ +Y S++++++ P + A ++ R +Q+PLA + +
Sbjct: 395 ------TEPISYVIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRIQDPLAELVKI 448
Query: 614 ----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ L L G++E D N+VG+D+N A + L
Sbjct: 449 DPKSIGVGQYQHDMNQKKLSEALG-----GVVE----DCVNKVGVDLNTA-----SASLL 494
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
++ISG+ A ++ G RK + LG K F GFLR+
Sbjct: 495 EYISGISKPIAKNIVIYREENGKFKNRKQLLKVAKLGPKAFEQCAGFLRINDGDNP---- 550
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYL 789
LD T +HPESY A++L + + +D+ L+ + V D +
Sbjct: 551 -----LDGTSVHPESYEAAEKLLEMLEVKDLR--------ELQAKAKEV----DAKREQS 593
Query: 790 LDRHIKEKKRENKRE-----TLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT- 843
+ + +K+KK+ + TL I +EL +D R + +P ++ + D
Sbjct: 594 ISQKVKDKKKMAQELSIGEITLTDIIKELEKPSRDPREEMPKP-------ILRTDVLDMK 646
Query: 844 -LAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKI 902
L EG +++ TVR V A + G++ S D + GDI+ K+
Sbjct: 647 DLTEGMILKGTVRNVIDFGAFVDIGVHQDGLVHISQLSKQKFVKHPLDIVSVGDIVEVKV 706
Query: 903 KS--IQKNRYQVFLVC 916
S + K R Q+ ++
Sbjct: 707 LSVDVSKKRIQLSMIL 722
>gi|427386271|ref|ZP_18882468.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides oleiciplenus YIT 12058]
gi|425726311|gb|EKU89176.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides oleiciplenus YIT 12058]
Length = 708
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 124/553 (22%), Positives = 221/553 (39%), Gaps = 96/553 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + GL E L L L++ + P + A +
Sbjct: 107 KPKRRTRAEVARQKGL-----------EPLATLLMLQR--------EPNPGKRAEAYVKG 147
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
++ L+GAR + A ++S + R VR F AV++ +S D + +
Sbjct: 148 EVKDAEDALKGARDIIAEQVSEDEQARNTVRFAFSRQAVITAKVVKGKESEADKYRDY-- 205
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ KPL+K Q L I++AE E LL+V+I P+D +C E L +S
Sbjct: 206 --FEFSKPLKKCTSHQLLAIRRAEAEGLLKVSIS-PDDE------ECVER-LERRFVRSN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+Q ++DA L S+ E + +A + + + L + P +K
Sbjct: 256 NACGEQVAEAVQDAYKRLLKSSIETEFAAQSKEQADEEAIRVFVQNLRQLLLASPLGQK- 314
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS-- 505
RV+ PG + V LD+ G + L ++N+
Sbjct: 315 -----------RVMG--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHAPVY 351
Query: 506 KKNDQ-ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM--DE 562
K D ++ K + +Q + +G S E + H+ E
Sbjct: 352 KTADAVSKIQKMVEAYQIEAIAVGNGTAS----------------RETEEFLKHQTFRKE 395
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILS 622
+ + E +Y S+I+ D+ P V+ AV++ R L +PLA + + + S
Sbjct: 396 IQVFVVSEQGASIYSASKIARDEFPEYDVTVRGAVSIARRLMDPLAELVKI-----DPKS 450
Query: 623 WKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAAS 682
+ ++ + + ++ + N VG+++N A L +ISGLGP+ A +
Sbjct: 451 IGVGQYQHDVDQSKLKKSLDSTVESCVNLVGVNLNTASSH-----LLTYISGLGPQLAQN 505
Query: 683 LQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
+ GA +RK + +G K F GFLR+ Q + LD++ +HP
Sbjct: 506 IVNYRAENGAFTSRKQLMKVPRMGAKAFEQCAGFLRI---------PQAQNPLDNSAVHP 556
Query: 743 ESYGLAQELAKEV 755
ESY + +++AK++
Sbjct: 557 ESYCIVEQMAKDL 569
>gi|307611706|emb|CBX01401.1| hypothetical protein LPW_30941 [Legionella pneumophila 130b]
Length = 789
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 137/637 (21%), Positives = 264/637 (41%), Gaps = 103/637 (16%)
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+Q R A + Y + +E I R ++L + +S+ AAET+ ++D+ L +
Sbjct: 53 VQLRFLAERLIYLRELDERRTVILQSIRE--QEKLTPELEQSILAAETKTRLEDLYLPY- 109
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDEL- 251
RPKR TK Q+ ++ LE + L
Sbjct: 110 ----------------RPKRRTK--------------------AQIAIEAGLEPLAHALW 133
Query: 252 EDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
+DP PEE AS F A ++QA L GARH+ + + + +R + +V
Sbjct: 134 KDPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELINELREYLWQHGIVK 193
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
+ + F + + + ++K + L + + E +LQV++ LP+ N
Sbjct: 194 SVGNSTKKDQANKFSDY----FDYSEAIKKIPSHRALALFRGRREGILQVSLVLPDQDAN 249
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
Y + V+ + + QR+ D +L+ + V+ + L+
Sbjct: 250 ---------YGENKVAAYFNVTDRQRKA------DGWLIDT-VRMTWKIKLFTKLELELL 293
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVL 488
+ + ++ ++ + + D+ A P+V PG + V++D++G+++D
Sbjct: 294 TRLREIADEEAIKVFSKNLRDLLLAAPAGPQV-TIGLDPGIRTGVKVVVVDATGKLLD-- 350
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
++ QN Q L KF +Q +++ +G N + + + + + KM
Sbjct: 351 YSVIFPFAPQNEWHQSIAD-----LAKFAAKYQVNLISIG--NGTGSRETERLVADLIKM 403
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
+ +L+ + E+ +Y S I++++ P +++ AV++ R LQ+PLA
Sbjct: 404 YPDL---------KLTKIIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLA 454
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ + E S + ++ + + ++ V+ D N VG+DIN A A
Sbjct: 455 ELVKI-----EAKSIGVGQYQHDVNQAKLARCLDGVVEDCVNAVGVDINTA-----SAAL 504
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L ISGL A ++ + GA R + +G+K F A GFLR+ A
Sbjct: 505 LSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNINRMGEKAFQQAAGFLRIMNGDNA--- 561
Query: 729 SQFIDLLDDTRIHPESYGLAQELA--KEVYNRDIEGD 763
LD + +HPE+Y L +++ K+V ++I G+
Sbjct: 562 ------LDASCVHPEAYPLVEKIISDKKVSIKEIIGN 592
>gi|229021837|ref|ZP_04178413.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus AH1272]
gi|228739477|gb|EEL89897.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus AH1272]
Length = 722
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 205/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P E A F S++ LQGA+ + A +S R ++R+ ++S+
Sbjct: 139 KENPAEKAMEFVDGEKEVESAEDALQGAQDIIAELVSDNASYRSWIRNTTFRKGIMSSSV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + E+PL+K + L + + E+E +L+V++ P + +N+
Sbjct: 199 KDKEKDEKNIYEMY----YDYEEPLQKIVPHRVLAMNRGEKEDVLRVSVVTPTEEINQFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSA +L ++D + PS+ +E R ++ A+ + +
Sbjct: 255 H---KKMIRDEASKSAHYV----QLAIEDGYKRLIQPSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLSVVDDTGKVLNIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
+ ++ + +++L + +Q ++ +G S + E I +++
Sbjct: 355 HPPVRKYEDAK---------KKVLSIIDKYQVEMIAIGNGTASRET-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
RDV + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKRDVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R + LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEDGKFTKRTELKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|335046388|ref|ZP_08539411.1| Tex-like protein N-terminal domain protein [Oribacterium sp. oral
taxon 108 str. F0425]
gi|333760174|gb|EGL37731.1| Tex-like protein N-terminal domain protein [Oribacterium sp. oral
taxon 108 str. F0425]
Length = 720
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 151/710 (21%), Positives = 274/710 (38%), Gaps = 168/710 (23%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K DLS+ + + + LL + +PFIA YRKE L ND+ R
Sbjct: 6 KIAEDLSLKKMQVEAAVQLLD-EGNTVPFIARYRKEATHGL-------------NDEELR 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ + L + +L+ ++R+S L S +A +L D
Sbjct: 52 S----LEERLQYLRNLE------ERRESILNS------------------IAEQGKLTDE 83
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ +EAA+T ++D L+ P YK+ +R+
Sbjct: 84 LKAQIEAADTAVRLED------LYLP----------YKKKRRTR---------------- 111
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC--AMFNSSQAVLQGARHMAAVEI 288
G + + GL E + + + P P + A N+ +S + L A+ + A E
Sbjct: 112 -GMIAREKGL----EGLAEAILTPGVNPVKEAENYLSEEKEVHSVEEALNYAKDILAEEF 166
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCP-----TPDGDSAIDSFHQFAGVKWLREKPLRKFEDA 343
S R+++R+ M+ +S+ PD + + + + E+ ++
Sbjct: 167 SENASYREWIRNKTMELGSISSSKKDAEENPDAKT-YEMYFDY-------EEKVKTIPGY 218
Query: 344 QWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
+ L I + E+EK+L V + P++ + YL K Q + L+ + L
Sbjct: 219 RTLAINRGEKEKVLSVKLNFPQEEIIA--------YLEKQAGKDLQ--GENLRLLQEAVL 268
Query: 404 DNF---LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPR 460
D+F + PS+ E R++++ +A+ + + L + P K
Sbjct: 269 DSFKRLISPSIETEIRNILTEKAEDGAIAIFADNLKQLLMQAPIVGK------------- 315
Query: 461 VLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
+ W PG + ++D +G+V+D ++Q K + K +
Sbjct: 316 -VVLGWDPGFRTGCKIAVVDPTGKVLDTTVIYPTPPKNQ-------VKEAMAVIHKLIEK 367
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
H+ ++ LG S S K +I + E V + V +E+ +Y S
Sbjct: 368 HKVDIIALGNGTASRESEK-----VISDYIHETKSKVQY-------VIVNEAGASVYSAS 415
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPD 635
++++++ P + + ++ R LQ+PLA + + G G+ LE L
Sbjct: 416 KLATEEFPNFDTGERSSTSMARRLQDPLAELVKIEPKAIGVGQYQHDMNQNKLEEQLN-- 473
Query: 636 EKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFT 695
+ D N VG+D+N A A L +ISG+ A ++ GA +
Sbjct: 474 -------NTVEDCVNHVGVDLNTA-----SAALLSYISGINKTLAKNIVVYREENGAFKS 521
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
RK+ + LG K F + GFLR+R + +LD T +HPESY
Sbjct: 522 RKELLKVAKLGPKAFEQSAGFLRIREGKE---------VLDRTSVHPESY 562
>gi|297620416|ref|YP_003708553.1| hypothetical protein wcw_0172 [Waddlia chondrophila WSU 86-1044]
gi|297375717|gb|ADI37547.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
Length = 746
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 136/616 (22%), Positives = 258/616 (41%), Gaps = 122/616 (19%)
Query: 157 DETRLALNQ------QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRP 210
D+ RLA+ + +L + + +EA ET+ ++D+ L + +P
Sbjct: 66 DDRRLAILESIESQGKLTEELRSKIEACETKSALEDLYLPY-----------------KP 108
Query: 211 KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM- 269
KR TK + + GL +A+ L + + D PEE A+ F A
Sbjct: 109 KRRTKATIAREKGLEPLAA------------LIIAQGVDG------NPEEDAAAFINAEK 150
Query: 270 -FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
S++ L+GARH+ A IS + R ++R + +A++ + + F Q+
Sbjct: 151 GVESAEQALEGARHIVAEWISEDAENRAFLREAYQQDALLVSQAKEEWKEKDSKFKQYYD 210
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
L +RK ++L I++ E+E +L V +++ E+ + +E VS S+
Sbjct: 211 FSEL----VRKIPSHRYLAIRRGEQEMVLSVRLEVEEEPI------LRELEKRARVSSSS 260
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEAR---SLMSGRAKSWLLMEYGKALWNKVSVGPYQ 445
++ Q ++ ++D+ L S+ + R + S R + + + L +G
Sbjct: 261 P-YSKQLKMAVEDSYRRLLSTSIESDVRVDLKMSSDRDAVEIFEQNLRHLLLSPPMG--N 317
Query: 446 RKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS 505
R I P + A TT LDS+ T LT + + DQ
Sbjct: 318 RSVIGIDPGLRTGCKCAAVS-------TTGKYLDST--------TFYLT-KGEKGLDQA- 360
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
+ND +F+ H P + +G N + + + + EM E+ +
Sbjct: 361 -RND---FYRFVKKHTPFAIAIG--NGTGNRETETFVKNLLSQ---------SEMKEIIV 405
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKL 625
V E +Y S ++ ++ P ++ AV++ R LQ+PLA + + + ++
Sbjct: 406 VQVSECGASVYSASDVAREEFPDLDLTIRGAVSIARRLQDPLAELVKVEPKSLGVGQYQ- 464
Query: 626 CPLENFLTPDEKYGMIEQVMVDVT----NQVGLDINLAIHREWQFAP--LQFISGLGPRK 679
D ++E+ + DV NQVG+++N A +P L ++ G+GP
Sbjct: 465 --------HDVYQALLEKKLHDVVESCVNQVGVNLNTA-------SPSLLSYVVGIGPSL 509
Query: 680 AASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
+ + + G +R+ + GLG + F + GFLR+ + G+ + LD +
Sbjct: 510 SKKIVQFREERGEFKSRQQLMEVSGLGARAFEQSAGFLRI-QGGE--------NPLDSSA 560
Query: 740 IHPESYGLAQELAKEV 755
+HPE Y L +++AK++
Sbjct: 561 VHPERYELVKQMAKDL 576
>gi|313674771|ref|YP_004052767.1| tex-like protein [Marivirga tractuosa DSM 4126]
gi|312941469|gb|ADR20659.1| Tex-like protein [Marivirga tractuosa DSM 4126]
Length = 748
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 155/684 (22%), Positives = 280/684 (40%), Gaps = 150/684 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFI+ YRKE SL +EV + D R L+ DLDK+ R
Sbjct: 31 VPFISRYRKEMTGSL------DEVAVADVRD--RVQQLR---------DLDKR------R 67
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ L+S ++ ++L + K + AAET +++D+ L +
Sbjct: 68 EAILKSIKEQ------------------EKLTPELEKEINAAETMAKLEDIYLPY----- 104
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+PKR TK + + GL +A K + + L+L K DE
Sbjct: 105 ------------KPKRRTKATIAREKGLEPLA-KLIFEQANIDLELEAGKYIDE------ 145
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN----AVVSTCP 312
E+ ++ + A L GAR + A + +R+ +R +F++N + V +
Sbjct: 146 --EKAVADIESA--------LHGARDIIAEWANENAELREDIRELFLENGKFRSKVLSGK 195
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+G D F W E+ ++ + L +++ E+E +L + I PE+ + LF
Sbjct: 196 ETEGQKYKDYFE------W--EENVKTAPSHRILAMRRGEKEMILMLDIS-PEEE-DALF 245
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
E + +++AQ Q ++ L DA L PSM E R +A + +
Sbjct: 246 --IMEKHFVKADNEAAQ----QVKIALSDAYKRLLKPSMETEIRIFTKKKADEEAIKVFS 299
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTG 491
L + P +K+ V+A PG + V LD G++ LF
Sbjct: 300 DNLRQLLLAAPMGQKN------------VMAV--DPGFRTGCKLVCLDRQGKL---LFNE 342
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
+ Q+ +L+ + + + +G + T+ ++ E+
Sbjct: 343 AIYPHEP----QRQTAKAAALILQLVEKYNVEAIAIG----NGTAGRE---------TEK 385
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
+G ++ V +ES +Y S ++ ++ V+ AV++GR L +PLA +
Sbjct: 386 FINSIGLP-SSVTAVMVNESGASVYSASEVAREEFKDYDLTVRGAVSIGRRLMDPLAELV 444
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+ + ++ +N L K G+ + +V N VG+++N A + L +
Sbjct: 445 KIDAKSIGVGQYQHDVDQNLL----KAGL-DDTVVSCVNNVGVELNTASKQ-----LLTY 494
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+SGLGP A ++ + GA ++++ LG K F A GFLR+ S
Sbjct: 495 VSGLGPSIAENIVKYRNENGAFKSKEELKKVPRLGDKAFEQAAGFLRI---------SDA 545
Query: 732 IDLLDDTRIHPESYGLAQELAKEV 755
+ LD + +HPE Y L ++AK+V
Sbjct: 546 TNPLDSSAVHPERYDLVNKMAKDV 569
>gi|303231882|ref|ZP_07318593.1| Tex-like protein N-terminal domain protein [Veillonella atypica
ACS-049-V-Sch6]
gi|302513489|gb|EFL55520.1| Tex-like protein N-terminal domain protein [Veillonella atypica
ACS-049-V-Sch6]
Length = 725
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 109/517 (21%), Positives = 217/517 (41%), Gaps = 70/517 (13%)
Query: 244 LEKMGDELEDPKET---PEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
LE + D + + T P ++A + + + +QGA + A +S R +R
Sbjct: 121 LEPLADMILNDTVTSGNPLDIAKEYVSEEVPTPEDAIQGASDIVAEIVSDSADFRATLRK 180
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVT 360
+ D + D F Q+ +P+R+ + L + + E+ L++
Sbjct: 181 RMWKEGFIQAELVEDNEHK-DQFLQYNEYA----EPVRQMPSHRILAVNRGEKLGALKLA 235
Query: 361 IKLPEDSLNKLFSDCKEHYLSDGVSKSAQ-LWNDQRELILKDALDNFLLPSMVKEARSLM 419
+ +P++S + Y+ G++ + Q +++D + + DA + P++ ++ R+ +
Sbjct: 236 LTVPDESYIQ--------YMVRGITNNEQSIFSDVKASAVADAYKRLMFPALERDIRNEL 287
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVML 478
+ A + +G L N + P A V+ PG + ++
Sbjct: 288 TESADEQAIKVFGVNLKNLLLQPPL-------------AGHVI-MGLDPGYRTGCKMAII 333
Query: 479 DSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
D+ G V+D G L + Q+++K E++ KF V L ++ S +
Sbjct: 334 DAQGNVLDY---GAYYLTNSEKLKQEAQKKLAEKIRKFK-------VTLLSIGNGTASYE 383
Query: 539 DDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVA 598
+ + KM+EE D + + +E+ +Y S+++ D+LP ++ AV+
Sbjct: 384 TE--QFASKMIEEEKLDCHY-------IITNEAGASVYSASKLAIDELPDLDVTIRGAVS 434
Query: 599 LGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINL 658
+ R +Q+PLA + + S + ++ + + ++QV+ V N VG+++N
Sbjct: 435 IARRVQDPLAESVKI-----DPKSIGVGQYQHDVNQKQLSHTLDQVVESVVNHVGVELNT 489
Query: 659 AIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLR 718
A A LQ I+G+ A ++ G +RK + LG F GFLR
Sbjct: 490 A-----SPAILQHIAGISSTVAKNIVAFRQENGGFTSRKQLLKVPRLGPAAFTQCAGFLR 544
Query: 719 VRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ + LD+T +HPESY LA+ + E+
Sbjct: 545 LNGAKNP---------LDNTSVHPESYELAERIIGEL 572
>gi|315924878|ref|ZP_07921095.1| YhgF like protein [Pseudoramibacter alactolyticus ATCC 23263]
gi|315621777|gb|EFV01741.1| YhgF like protein [Pseudoramibacter alactolyticus ATCC 23263]
Length = 716
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 173/784 (22%), Positives = 301/784 (38%), Gaps = 144/784 (18%)
Query: 144 YKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVD 203
Y +R E + I +A Q+L ++ ++E AET + +D L+ P
Sbjct: 60 YTRRLEARKQEILGS--IAGQQKLTPELAAAIEGAETLQAAED------LYLP------- 104
Query: 204 EGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMAS 263
YK+ KR T+ + GL E L L+++ + D L A
Sbjct: 105 ---YKK-KRRTRAMAAKAQGL-----------EPLALKIAAGETDDALA-------AAAG 142
Query: 264 NFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSF 323
+F ++A L GAR + A I+ R Y+R +NA + T T +
Sbjct: 143 HFVNDAVADAEAALAGARDIVAETIADNAAFRGYIRRYITENARIHTAVTGAFAKKKTPY 202
Query: 324 HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDG 383
+ + + L + + L + +AE+EK++ V + D+L + H +
Sbjct: 203 TNY----YDHSEGLGAMANHRILAMNRAEKEKVITVKV----DALTEFILPWLTHQV--- 251
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+SK A Q DA + P++ +E R+ M RA++ + +G L + P
Sbjct: 252 MSKGAGRGCGQLAQAAADAYKRLIFPAVEREIRAEMKERAEASAIRAFGVNLRKLLLTRP 311
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ 503
++ K + + PG + V+D + T T + + Q
Sbjct: 312 FREK--------------VTMGFDPGYRNGCKI------AVLDPMGTLLATAKVYPAKPQ 351
Query: 504 QSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDEL 563
Q + +L + +Q ++ +G S S + I + ++ PR V +
Sbjct: 352 QKIAESRRVILALIERYQVDMIAIGNGTASRES-----EQFIAETLKACPRRV-----QY 401
Query: 564 SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGRE 619
IV E+ +Y S +++ + P +++ A+++G LQ+PL+ + + G G+
Sbjct: 402 CIV--SEAGASIYSASPLAAAEYPDVDVSLRGAISIGGRLQDPLSELVKIEPEHIGVGQY 459
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRK 679
L LT V+ D N VG+DIN A A L++++G+
Sbjct: 460 QHDVNQKVLSEALT---------NVVEDAVNLVGVDINRA-----SPALLKYVAGITGTM 505
Query: 680 AASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
A ++ G R+ + GLG + + GFLR+ G+ ++LD+T
Sbjct: 506 ADNIVAYREANGRFANRRAVLKVKGLGPRAYEQCAGFLRI-TGGE--------EVLDNTG 556
Query: 740 IHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR 799
IHPESY A L DR L L I+E +
Sbjct: 557 IHPESYPAAHALM---------------------------DRLSLTPADLKPARIRETAK 589
Query: 800 ENKRETLYLIRRELIHG---FQDWRNQYKEPSQD------EEFYMISGETEDTLAEGRVV 850
+R + REL G QD + +P +D E + D L +
Sbjct: 590 TLRRVDVEATARELGIGEPTLQDMIAELCKPGRDPRDEAPEPILKQDVLSLDDLKPDMAL 649
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRY 910
+ TVR V A + G++ SD + SD L GD++T K+ S+ K R
Sbjct: 650 KGTVRNVVDFGAFVDIGVHQDGLVHISQISDRYVKHP-SDVLSVGDVVTVKVLSVDKPRS 708
Query: 911 QVFL 914
++ L
Sbjct: 709 RIAL 712
>gi|125623169|ref|YP_001031652.1| transcription accessory protein TEX [Lactococcus lactis subsp.
cremoris MG1363]
gi|389853494|ref|YP_006355738.1| transcription accessory protein TEX [Lactococcus lactis subsp.
cremoris NZ9000]
gi|124491977|emb|CAL96904.1| transcription accessory protein TEX [Lactococcus lactis subsp.
cremoris MG1363]
gi|300069916|gb|ADJ59316.1| transcription accessory protein TEX [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 713
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 147/681 (21%), Positives = 274/681 (40%), Gaps = 145/681 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ E + I D D L +R
Sbjct: 31 VPFIARYRKEATGSL--------------DEVE----------IKKIIDEDNLLTKLSER 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+A+ S + EE + L DS+ + +AE EV+D L+ P
Sbjct: 67 KTAVLS----KIEELGK-------------LTDSLRSQILSAEKLTEVED------LYLP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK KR TK + + GL+ +A +S L
Sbjct: 104 ----------YKE-KRRTKATIAKENGLFPLAQLIVKNSANL------------------ 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A F F S Q L+GA + + IS + +R ++ +N+++++ D
Sbjct: 135 --EEEAEKFVNENFTSPQKALEGAVDILSEAISEDARLRSWLTGEIKNNSLLTSSLKKD- 191
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
A+D F EK + + + + L + + E+ +L V + ED + + F+
Sbjct: 192 --AVDEKQVFQMYYEFSEK-VSELPNYRVLALNRGEKLGILSVKFENNEDKILRYFA--- 245
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
++ A N ++ +KDA+ L+P+M + R ++ +A++ + +G+ L
Sbjct: 246 --------ARFAAQNNLMMQVAIKDAVKKKLIPAMERSIRGELTEKAEASAIEVFGENLK 297
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
N + V P + + + + P + ++D +G+++ + T +
Sbjct: 298 NLLLVAPLKGR--------------VVMGFDPAYRTGAKLAIVDETGKLL--MTTVIYPV 341
Query: 496 RSQNV-RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
+ N + Q+KKN L KF+ ++ +++ +G N + + + + K E +
Sbjct: 342 KPANAGQIAQAKKN----LAKFIREYGVNMIAIG--NGTASRESESFVSEVLK--ENNFS 393
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
DV + V ES +Y S ++ ++ P + A+++ R LQ+PLA + +
Sbjct: 394 DVYY-------VIVSESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIE 446
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
+ ++ E LT + +D + ++ + L ++G
Sbjct: 447 PKAIGVGQYQHDVSEKKLTEN----------LDFVVETVVNQVGVNVNTASPSLLSHVAG 496
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L A ++ + GA+ TR + LG K F A GFLR+ +
Sbjct: 497 LNKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLRIPEGK---------NF 547
Query: 735 LDDTRIHPESYGLAQELAKEV 755
LD+T +HPESY + ++L E+
Sbjct: 548 LDNTGVHPESYKVTEQLLAEI 568
>gi|406659345|ref|ZP_11067483.1| YhgF like protein [Streptococcus iniae 9117]
gi|405577454|gb|EKB51602.1| YhgF like protein [Streptococcus iniae 9117]
Length = 710
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 186/876 (21%), Positives = 343/876 (39%), Gaps = 194/876 (22%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K DLSIS I + L L + IPFIA YRKE N D+ E
Sbjct: 8 KIASDLSISEKQIEQVLALTA-EGNTIPFIARYRKEVT--------------GNLDEVE- 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ AI DL++ L++RK + + EE+ + L D+
Sbjct: 52 ---------IKAIIDLERSIRNLEERKETILG----KIEEQGK-------------LTDT 85
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ S+ A+E E+++ L+ P E KR TK + +AGL+ +A
Sbjct: 86 LKASILASEKMAELEE------LYLPYKE-----------KRRTKATIAREAGLFPLARF 128
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISC 290
+++ L E+ A NF F S +A L GA + +S
Sbjct: 129 ILQNAKNL--------------------EKEAENFLSENFTSPEAALAGAVDILVEALSE 168
Query: 291 EPCVRKYV-RSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ 349
+ +R + I+ + + ST D ++D F +K + K + + L +
Sbjct: 169 DTKLRSWTYNEIWNYSHITSTVK----DQSLDDKEVFQIYYDFSDK-ISKMQGYRTLALN 223
Query: 350 KAEEEKLLQVTIKLPEDSLNKLFS---DCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
+ E+ +L+V + D + + +S K Y+ D +S++ L
Sbjct: 224 RGEKLGILKVNFEHNIDKMQRFYSVRFKEKNAYIEDLISQT---------------LKKK 268
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
++P+M + R+ ++ A+ + + + L N + V P + K + +
Sbjct: 269 IVPAMERRIRTELTEAAEDGAIKLFSENLRNLLLVSPLKGK--------------MVLGF 314
Query: 467 GPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVV 525
P + ++D +G+++ + SQ + +++K E L + + + ++
Sbjct: 315 DPAFRTGAKLAVVDQTGKLMTTHVIYPVAPASQ-AKIEKAK----EELAEIIATYHIEII 369
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
+G S S E D+ + S V +ES +Y S ++ +
Sbjct: 370 AIGNGTASRES-------------EAFVVDILKDFPNTSYVIVNESGASVYSASELARHE 416
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKY 638
P + A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 417 FPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSENLDF------- 469
Query: 639 GMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
V+ V NQVG++IN A L +SGL + ++ + G I +R +
Sbjct: 470 -----VVDTVVNQVGVNINTA-----SSVLLAHVSGLNKSISENIVKYREENGMITSRAE 519
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
LG K F A GFLR+ + ++LD+T +HPESY ++L K + +
Sbjct: 520 IKKVPRLGAKAFEQAAGFLRIPNAK---------NILDNTGVHPESYPAVKQLFKLLAIK 570
Query: 759 DIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
+ DDE ++ ++++ L E ETL I +L+ +
Sbjct: 571 TL-----DDEAKAKLQALNLKEMAAQL--------------EIGFETLTDIVADLLKPGR 611
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
D R+ +K P ++ + L G+ ++ TVR + A + G++ +
Sbjct: 612 DLRDDFKAPVLRQDVLDLKD-----LVIGQKLEGTVRNIVDFGAFVDIGVHEDGLIHISE 666
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
S + + S L GD++T + I R++V L
Sbjct: 667 MSKTFVNHP-SQVLSVGDLVTVYVSKIDLTRHKVNL 701
>gi|402493125|ref|ZP_10839880.1| Tex-like protein [Aquimarina agarilytica ZC1]
Length = 716
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 148/703 (21%), Positives = 270/703 (38%), Gaps = 170/703 (24%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFI+ YRKE +L +EV AI + K W Q
Sbjct: 39 VPFISRYRKEATGNL------DEV---------------------AIESIKKNWEAFQAL 71
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLH 194
K ++ K AL +Q L D + ++ +AE V+D+ L F
Sbjct: 72 KKRKETIVK----------------ALGEQGVLTDQLKSTIASAENITAVEDIYLPF--- 112
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
+ KR TK + +AGL E L + ++ D +
Sbjct: 113 --------------KKKRQTKATIAKQAGL-----------EPLAKIIMAQREHDIMYK- 146
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
A+ F S + L GA H+ A +S R +R +F A ++T
Sbjct: 147 -------AAQFIKGTITSEKEALAGASHIIAEWVSEHTATRNSLRRLFQRKATIATKVVK 199
Query: 315 DGDSAIDSF---HQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE----DS 367
++ +S F + L P + L + +AE+E ++++ I + + D
Sbjct: 200 GKETEKESLVYEAYFDSSELLSRCPSHRL-----LAMLRAEKEGVVRLKISVDKEEALDH 254
Query: 368 LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWL 427
+++ F +D + ++ + D+ L P++ E L +A
Sbjct: 255 IDRFFVTSSNESCTDIIFEA-----------VADSYTRLLAPAIANETLQLAKQKADEAA 303
Query: 428 LMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD 486
+ + + L + P K R+LA PG K V LD+ G++V
Sbjct: 304 VHVFSENLKQLLLAAPLGEK------------RILA--LDPGFKSGCKLVCLDAQGKLV- 348
Query: 487 VLFTGCLTLRSQNVRDQ--QSKKNDQERLLKFMMD-HQPHVVVLGAVNLSCTSLKDDIYE 543
++ + QSK N+ + +K +++ ++ + +G + T+ ++ Y
Sbjct: 349 ---------HNETIYPHPPQSKFNEAIKKVKSLVNAYKIEAIAVG----NGTAARETEYF 395
Query: 544 IIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYL 603
+ R + D + + +ES +Y S I+ + P V+ AV++GR L
Sbjct: 396 V---------RKIPFTSD-IKVFMVNESGASIYSASPIARAEFPDYDVTVRGAVSIGRRL 445
Query: 604 QNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
+PLA + + I ++ + L + ++ + N VG+++N A
Sbjct: 446 ADPLAELVKIDPKSLGIGQYQHDVNQQLLKQE-----LDTTVAHCVNAVGINVNTASE-- 498
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+ L ++SG+GP+ A+++ + I +RK GLG K F FLR++
Sbjct: 499 ---SLLSYVSGIGPKLASNIIAFRTESEGISSRKALKKVKGLGAKAFEQGAAFLRIKNGE 555
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLND 766
A LD++ IHPE Y L ++AK D++ LND
Sbjct: 556 HA---------LDNSAIHPERYALVSQMAK-----DLKVTLND 584
>gi|83317555|ref|XP_731211.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491178|gb|EAA22776.1| Arabidopsis thaliana BRAHMA ortholog [Plasmodium yoelii yoelii]
Length = 1150
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 140/302 (46%), Gaps = 39/302 (12%)
Query: 476 VMLDSSGEVVDVLFTGCLTL----RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVN 531
V D G++++ ++ + + + + + +Q+ ND LL F+ +P ++ +G +
Sbjct: 314 VACDIYGDIIEYIYLDNIYIDIIKKEKTIIEQEQIANDVNILLSFLNKIKPDIICVGIRD 373
Query: 532 LSCTSLKDDIYEII--------------------FKMVEEHPR-DVGHEMDELSIVYGDE 570
+ + I ++ F ++H + H + + I+ +
Sbjct: 374 IPSYMVFSYIQNMLHNGKSGRSDDRSGRSDDRANFSSKDQHSNGSISHNITSI-IIAENL 432
Query: 571 SLPRLYENS-RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC-GPGREILSWKLCPL 628
+P + N+ + S+D ++L RY+QNPL V +L + + + L L
Sbjct: 433 YIPFIVTNNLKYSTDLTTKYSREALLGLSLCRYVQNPLDAVLSLFEDENKNMFNICLHDL 492
Query: 629 ENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFA-PLQFISGLGPRKAASLQRSL 687
+ ++ + + ++++D+ N+ G DIN ++ F L +ISGLG RK L + L
Sbjct: 493 QKYICGYKLEHVFYRIILDIVNKTGCDINFVKKKKQHFGNALSYISGLGLRKKEELMK-L 551
Query: 688 VRAGAIFTRKDFVTAHG----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
+ + TR+D +T +G V++N F+R+ A+ +++I+ LD+TRIHP
Sbjct: 552 LHNKNLNTREDLLTLSSNKNLIGNCVYINCASFIRI-----IATGNEYIEALDNTRIHPL 606
Query: 744 SY 745
+Y
Sbjct: 607 NY 608
>gi|445059184|ref|YP_007384588.1| RNA binding protein [Staphylococcus warneri SG1]
gi|443425241|gb|AGC90144.1| RNA binding protein [Staphylococcus warneri SG1]
Length = 716
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 214/496 (43%), Gaps = 87/496 (17%)
Query: 272 SSQAVLQGARHMAAVEISCEPCVR-KYVRSIFMDNAVVSTCPTPDGDSA--IDSFHQFAG 328
S + +QGA+ + A +IS P R + +++++ +V+T D ++ +A
Sbjct: 152 SVEEAIQGAQDIIAEQISDNPKYRSRILKNVYQQGQIVTTKKKKAEDEKEIFSMYYDYA- 210
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+P++K + + L + + E+EK+L V I+ + + K D ++ + +A
Sbjct: 211 ------EPIKKIANHRVLAVNRGEKEKILSVKIEFDTEIVEK---DIEKQEIKRETEATA 261
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ + +KD+L ++PS+ +E R ++ +A++ + + + L N + P + K
Sbjct: 262 IIRD-----AIKDSLKRLIMPSIEREIRGDLTEKAENHAIDVFSENLRNLLLQPPMKGKQ 316
Query: 449 NDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNV---RDQQS 505
+ A R C P TFV ++NV +
Sbjct: 317 ---ILGVDPAFRT-GCKLAVINPYGTFV--------------------AKNVIYPHPPVN 352
Query: 506 KKNDQERLL-KFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD-EL 563
K + E+++ K + D+ ++ +G S + E+ +V ++ + ++
Sbjct: 353 KTDTAEKIVVKMINDYDVQLIAIGNGTAS-------------RETEQFIANVINKFNLKV 399
Query: 564 SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGRE 619
+ +E+ +Y S I+ + P + + AV++GR +Q+PL+ + + G G+
Sbjct: 400 QFIIVNEAGASVYSASEIARAEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSIGVGQY 459
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRK 679
LE LT V+ NQVG+D+N A + LQ++SGL +
Sbjct: 460 QHDVNQKELEKALTF---------VVETAVNQVGVDVNTASR-----SLLQYVSGLSSQI 505
Query: 680 AASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
A +L GAI KD LG K F ++GF+R+ + LD+T
Sbjct: 506 AQNLIEYREENGAIKHHKDIAKVKRLGAKTFEQSIGFMRIVDGTEP---------LDNTS 556
Query: 740 IHPESYGLAQELAKEV 755
IHPESY + +L ++
Sbjct: 557 IHPESYDVTYQLLNQL 572
>gi|418038635|ref|ZP_12676964.1| hypothetical protein LLCRE1631_01771 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|354693283|gb|EHE93060.1| hypothetical protein LLCRE1631_01771 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 712
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 146/680 (21%), Positives = 271/680 (39%), Gaps = 143/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ E + I D D L +R
Sbjct: 31 VPFIARYRKEATGSL--------------DEVE----------IKKIIDEDNLLTKLSER 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+A+ S + EE + L DS+ + AAE EV+D L+ P
Sbjct: 67 KTAVLS----KIEELGK-------------LTDSLKAQILAAEKLTEVED------LYLP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK KR TK + + GL+ +A +S L
Sbjct: 104 ----------YKE-KRRTKATIAKENGLFPLAQLIVKNSANL------------------ 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A F F S Q L+GA + + IS + +R ++ +N+++++ D
Sbjct: 135 --EEEAEKFVNENFTSLQKALEGAVDILSEAISEDARLRSWLTGEIKNNSLLTSSLKKD- 191
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
A+D F EK + + + + L + + E+ +L V + ED + + F+
Sbjct: 192 --AVDEKQVFQMYYEFSEK-VSELPNYRVLALNRGEKLGILSVKFENNEDKILRYFA--- 245
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
++ A N ++ +KDA+ L+P+M + R+ ++ +A++ + +G+ L
Sbjct: 246 --------ARFAAQNNPMMQVAIKDAVKKKLIPAMERSIRTELTEKAEASAIEVFGENLK 297
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
N + V P + + + + P + ++D +G+++ + T +
Sbjct: 298 NLLLVAPLKGR--------------VVMGFDPAYRTGAKLAIVDETGKLL--MTTVIYPV 341
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ N K D L KF+ ++ +++ +G N + + + + K E + D
Sbjct: 342 KPANAGQIAQAKKD---LAKFIREYGVNMIAIG--NGTASRESESFVAEVLK--ENNFSD 394
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
V + V ES +Y S ++ ++ P + A+++ R LQ+PLA + +
Sbjct: 395 VYY-------VIVSESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEP 447
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
+ ++ E LT + +D + ++ + L ++GL
Sbjct: 448 KAIGVGQYQHDVSEKKLTEN----------LDFVVETVVNQVGVNVNTASPSLLSHVAGL 497
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ + GA+ TR + LG K F A GFLR+ + L
Sbjct: 498 NKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLRIPEGK---------NFL 548
Query: 736 DDTRIHPESYGLAQELAKEV 755
D+T +HPESY + ++L E+
Sbjct: 549 DNTGVHPESYKVTEQLLAEI 568
>gi|414076131|ref|YP_006995449.1| transcriptional accessory protein [Anabaena sp. 90]
gi|413969547|gb|AFW93636.1| transcriptional accessory protein [Anabaena sp. 90]
Length = 719
Score = 83.2 bits (204), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 121/561 (21%), Positives = 230/561 (40%), Gaps = 102/561 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A+ + + G+ SLE E K E +
Sbjct: 106 RPKRRTRATIAREKGLEALATFIKSLNVKNGISASLEA-----ESAKYISETLG------ 154
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT---PDGDSAIDSFHQ 325
S+ L+GA + A E++ + +R +VR ++N V + P G + + +
Sbjct: 155 -VKSADEALKGASDILAEEVAEKAELRAHVRDYLLENGVFISRIKDEHPQGTTKFEMYRN 213
Query: 326 FAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYL-SDGV 384
+ +R ++ L + + E+EK+L + ED + YL S +
Sbjct: 214 Y----QIR---VKNIAPHNLLALCRGEDEKILSFEVAFDEDFV--------LSYLESQEI 258
Query: 385 SKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY 444
+ D +++LKD+ + + S++ E ++ K++ +E S+ +
Sbjct: 259 KTQVRNIRDFYQVMLKDSFNRLMKTSLISE----VTNEKKTFADIE---------SIKTF 305
Query: 445 QRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQ 503
+ ++ A + PG + +LD +G+ L Q V
Sbjct: 306 ETNLRELLLSAPAGMKP-TMAIDPGFRTGCKVAILDETGQF----------LEYQAVFPH 354
Query: 504 QSKKNDQ---ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
Q+ + Q + + K + +Q ++ +G N + + ++ I + P V
Sbjct: 355 QAAEQRQKAAQTIKKLLEKYQVQLIAIG--NGTASRETEEFVAEILPNIAHKPVKV---- 408
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL------C 614
+ES +Y S ++ ++ P V+ A+++GR LQ+PLA + +
Sbjct: 409 ------MVNESGASIYSASDVAREEFPDLDITVRGAISIGRRLQDPLAELVKIDPKSIGV 462
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
G + + KL +++ + N VG+D+N A +E L F+SG
Sbjct: 463 GQYQHDVDQKLLK-----------KKLDETVESCVNYVGVDLNTA-SKEL----LTFVSG 506
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
+ P A ++ + GA R+ + LG K F A GFLR+ R G+ +
Sbjct: 507 ITPTIANNIIAYRNQNGAFKNRRQLLKVAKLGPKAFEQAAGFLRI-RGGE--------NP 557
Query: 735 LDDTRIHPESYGLAQELAKEV 755
LD+T +HPESY L Q +A ++
Sbjct: 558 LDNTAVHPESYSLVQSIAADL 578
>gi|424780428|ref|ZP_18207301.1| Transcription accessory protein [Catellicoccus marimammalium
M35/04/3]
gi|422842830|gb|EKU27277.1| Transcription accessory protein [Catellicoccus marimammalium
M35/04/3]
Length = 719
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 143/684 (20%), Positives = 271/684 (39%), Gaps = 150/684 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL +EV + I D ++ L+KR
Sbjct: 33 IPFIARYRKERTGSL------DEV------------------AIKEIADTYQEEEQLEKR 68
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K +Q +K+ +Q +++ L+ A+T +EV+D+ +
Sbjct: 69 KQTIQQQLEKQ-----------------KQWTKELAQQLKEAKTLQEVEDI-------YR 104
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
P YK+ KR TK + GL E L L L P+E
Sbjct: 105 P---------YKQ-KRKTKAMIAKEHGL-----------EPFALWL--------LAHPQE 135
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
E + ++ + V QGA + A +S + R +VR + +++ +
Sbjct: 136 EIETQWEKYLSDEVSTKEEVEQGAIEIIAERVSQQRKERDWVRKEIWQHGSIASTKKKEA 195
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ F + + ++P++ + L + + ++EK+LQ+ ++ + F K
Sbjct: 196 EDEKAVFQMY----YEYQEPIKSVPSHRVLAMNRGKKEKVLQIQFLYDKEKIENFF--VK 249
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
+ ++ + SA + + + L FL PS+ +E + ++ +A+ + +G L+
Sbjct: 250 KAKATEDTTVSALIRQG-----IHEGLTRFLYPSLEREIQQELTQKAEKQAIDIFGLNLY 304
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLR 496
+ + P Q K V+ + ++DS+G+V+++
Sbjct: 305 HLLLQAPLQGK-------------VILGLDPAYRTGCKLAVIDSTGKVLEIAVIYPTASP 351
Query: 497 SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV 556
Q++ +E++ + + +Q ++ +G S S + I + ++E
Sbjct: 352 KQDI------PKAKEKIRQLVEKYQVEMIAIGNGTASRES-----EQFISECIQEF---- 396
Query: 557 GHEMDELSIVYG--DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
L I Y +E+ +Y S + + P + A+++ R LQ+PLA + +
Sbjct: 397 -----HLPIYYTIVNEAGASVYSASEAARKEFPELAVEERSAISIARRLQDPLAELVKIE 451
Query: 614 ---CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
G G+ ++ ++ E + V+ N+VG+D+N A A L+
Sbjct: 452 PKAVGVGQ---------YQHDVSQKELEQALRFVVETAVNKVGVDVNTA-----STALLE 497
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
++SGL A ++ G RK+ LG K + A+GFLR+
Sbjct: 498 YVSGLTATTAKNIVAYREEHGPFTERKELKNVSRLGPKSYEQAIGFLRIFDGK------- 550
Query: 731 FIDLLDDTRIHPESYGLAQELAKE 754
+ LD T IHP+SY AQEL +E
Sbjct: 551 --NPLDQTEIHPDSYSAAQELLQE 572
>gi|397665429|ref|YP_006506967.1| transcriptional accessory protein [Legionella pneumophila subsp.
pneumophila]
gi|395128840|emb|CCD07060.1| transcriptional accessory protein [Legionella pneumophila subsp.
pneumophila]
Length = 789
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 137/637 (21%), Positives = 263/637 (41%), Gaps = 103/637 (16%)
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+Q R A + Y + +E I R ++L + +S+ AAET+ ++D+ L +
Sbjct: 53 VQLRFLAERLIYLRELDERRTVILQSIRE--QEKLTPELEQSILAAETKTRLEDLYLPY- 109
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDEL- 251
RPKR TK Q+ ++ LE + L
Sbjct: 110 ----------------RPKRRTK--------------------AQIAIEAGLEPLAHALW 133
Query: 252 EDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
+DP PEE AS F A ++QA L GARH+ + + + +R + +V
Sbjct: 134 KDPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELINELREYLWQHGIVK 193
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
+ + F + + + ++K + L + + E +LQV++ LP+ N
Sbjct: 194 SVGNSTKKDQANKFSDY----FDYSEAIKKIPSHRALALFRGRREGILQVSLVLPDQDAN 249
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
Y + V+ + + QR+ D +L+ + V+ + L+
Sbjct: 250 ---------YGENKVAAYFNITDRQRKA------DGWLIDT-VRMTWKIKLFTKLELELL 293
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVL 488
+ + ++ ++ + + D+ A P+V PG + V++D++G+++D
Sbjct: 294 TRLREIADEEAIKVFSKNLRDLLLAAPAGPQV-TIGLDPGIRTGVKVVVVDATGKLLD-- 350
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
++ QN Q L K +Q +++ +G N + + + + + KM
Sbjct: 351 YSVIFPFAPQNEWHQSIAD-----LAKLAAKYQVNLISIG--NGTGSRETERLVADLIKM 403
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
+ +L+ + E+ +Y S I++++ P +++ AV++ R LQ+PLA
Sbjct: 404 YPDL---------KLTKIIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLA 454
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ + E S + ++ + + ++ V+ D N VG+DIN A A
Sbjct: 455 ELVKI-----EAKSIGVGQYQHDVNQAKLARCLDGVVEDCVNAVGVDINTA-----SAAL 504
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L ISGL A ++ + GA R + +G+K F A GFLR+ A
Sbjct: 505 LSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNINRMGEKAFQQAAGFLRIMNGDNA--- 561
Query: 729 SQFIDLLDDTRIHPESYGLAQELA--KEVYNRDIEGD 763
LD + +HPE+Y L Q++ K+V ++I G+
Sbjct: 562 ------LDASCVHPEAYPLVQKIISDKKVSIKEIIGN 592
>gi|317151867|ref|YP_004119915.1| Tex-like protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942118|gb|ADU61169.1| Tex-like protein [Desulfovibrio aespoeensis Aspo-2]
Length = 732
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 161/709 (22%), Positives = 271/709 (38%), Gaps = 152/709 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV + A+ D ++ L KR
Sbjct: 39 VPFIARYRKEATGSL------DEV------------------AVAAVRDRLEELAALDKR 74
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ A+ + +R L D++ + LEAA + ++D+ + P
Sbjct: 75 REAILASLAER-----------------DLLTDALRRELEAATDKARLEDI------YLP 111
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
RPKR T+ + + GL +A Q G+ D + + ++
Sbjct: 112 -----------HRPKRRTRGAMALERGLALLADA---LMAQRGI--------DPVAEARK 149
Query: 257 --TPEEMASNFKC-AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPT 313
TP ++ + + A L GAR + A +S P R+ +R++F +
Sbjct: 150 FVTPPDLVHDAAPEKLVPDVVAALAGARDIIAERVSENPKARQAMRALFAKRGRFGSRGV 209
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+ A ++ + W ++PL + L + + E E +L+++++ PED L
Sbjct: 210 KGKEEAGATYRDW--FDW--DEPLSAVPSHRALAMFRGEREGMLKLSLRPPEDEALGLM- 264
Query: 374 DCKEHYLSDGVSKSAQLWNDQREL--ILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
L G + D RE+ L D L PS+ E R+ + RA + +
Sbjct: 265 ---RRSLLRGAHPDVR--PDAREVGAALDDCYKRLLGPSIENEVRAEVKARADGEAIRVF 319
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFT 490
L + P +K RVLA PG + +LD+ G + + T
Sbjct: 320 AANLRELLLAAPLGQK------------RVLA--LDPGYRTGAKLAVLDAQGALKE--HT 363
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
+ S+ +D+ L ++ V +G + T+ ++ E
Sbjct: 364 TIFVVGSKKQQDEAGAT-----LRTLCARYEIEAVAVG----NGTAGRE---------TE 405
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R +G M + +ES +Y S ++ + P V+ AV++GR L +PLA +
Sbjct: 406 AFVRGLGLGM---PVALVNESGASIYSASEVARREFPDLDLTVRGAVSIGRRLMDPLAEL 462
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L L + V+ N +G+D+N A
Sbjct: 463 VKIDPKSIGVGQYQHDVDQAALRRAL---------DDVVASCVNSIGVDLNTA-----SV 508
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
L +SGLGP AA++ G +R+ + LG K F A GFLRVR S
Sbjct: 509 ELLSHVSGLGPVLAANIVAHRDEHGPFPSRRALLKVKRLGPKAFEQAAGFLRVRGS---- 564
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAI 775
D LD + +HPE Y L + +A++ DL DE A + I
Sbjct: 565 ------DPLDASAVHPERYELVKRMARDAGQ--TVADLLGDEAARQRII 605
>gi|327200639|pdb|3PSJ|A Chain A, Crystal Structure Of The Spt6 Tandem Sh2 Domain From
Saccharomyces Cerevisiae, Form Se-Spt6 (1247-1451)
Length = 210
Score = 83.2 bits (204), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
R+I HP + +A L +KE GE +IR SSRG +L +T K+ ++ H DI E
Sbjct: 11 RVINHPYYFPFNGRQAEDYLRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELE 70
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
K++ + +GK L + + DLD+++ Y+ V L S KF+ G+K +V +
Sbjct: 71 KENP-----LALGKVLIVDNQKYNDLDQIIVEYLQNKVRLLNEXTSSEKFKSGTKKDVVK 125
Query: 1084 LLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
+ P + VY F ++H++PG F L + + N
Sbjct: 126 FIEDYSRVNPNKSVYYFSLNHDNPGWFYLXFKINAN 161
>gi|207345100|gb|EDZ72031.1| YGR116Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 214
Score = 83.2 bits (204), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 957 AKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAH 1016
A+ R+I HP + +A L +KE GE +IR SSRG +L +T K+ ++ H
Sbjct: 8 ARAKRTHRVINHPYYFPFNGRQAEDYLRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQH 67
Query: 1017 KDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKG 1076
DI E K++ + +GK L + + DLD+++ Y+ V L M S KF+ G
Sbjct: 68 IDIQELEKENP-----LALGKVLIVDNQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSG 122
Query: 1077 SKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTN 1119
+K +V + + P + VY F +++++PG F L + + N
Sbjct: 123 TKKDVVKFIEDYSRVNPNKSVYYFSLNYDNPGWFYLMFKINAN 165
>gi|29346648|ref|NP_810151.1| RNA-binding protein [Bacteroides thetaiotaomicron VPI-5482]
gi|29338545|gb|AAO76345.1| putative RNA binding protein with S1 RNA-binding domain
[Bacteroides thetaiotaomicron VPI-5482]
Length = 724
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/557 (21%), Positives = 226/557 (40%), Gaps = 104/557 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L + + L++ +P T + A+ F
Sbjct: 120 KPKRKTRAEAARQKGL-----------EPLAMIMMLQR------EPNLTAK--AATFVKG 160
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
++ L+GAR + A +++ + C R +R+ F A ++ + + +
Sbjct: 161 DVKDAEDALKGARDIIAEQVNEDECARNAIRNQFTRQAEITAKVVKGKEEEAAKYRDY-- 218
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ + L++ + L I++AE E LL+V+I P+D C E V +
Sbjct: 219 --FDFSESLKRCTSHRLLAIRRAESEGLLKVSIS-PDDEA------CLERLDRQFVHGNN 269
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ + +E DA L PS+ E + +A + + + L + P +K
Sbjct: 270 ECSHQVKEAT-ADAYKRLLKPSIETEFAAQSKEKADDEAIRVFTENLRQLLLSPPLGQK- 327
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RVLA PG + V LD+ G + L ++N+
Sbjct: 328 -----------RVLA--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVN 364
Query: 508 NDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM--DE 562
E +L K + ++ + +G N + + +D + H+ +
Sbjct: 365 KTGEAASKLRKMIEAYEIEAISIG--NGTASRETEDF--------------INHQTFDRQ 408
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ + E +Y S+I+ D+ P V+ AV++GR L +PLA + + G G+
Sbjct: 409 IPVFVVSEQGASIYSASKIARDEFPDYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQ 468
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L +Q + + N VG+++N A L +ISGLGP+
Sbjct: 469 YQHDVDQTKLKKAL---------DQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQ 514
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ GA +RK+ + +G K F GFLR+ + LD+T
Sbjct: 515 LAQNIVNFRAENGAFSSRKELMKVPRMGAKAFEQCAGFLRIPEAKNP---------LDNT 565
Query: 739 RIHPESYGLAQELAKEV 755
+HPESY + +++AK++
Sbjct: 566 AVHPESYHIVEQMAKDL 582
>gi|255534058|ref|YP_003094430.1| RNA binding S1 domain-containing protein [Pedobacter heparinus DSM
2366]
gi|255347042|gb|ACU06368.1| RNA binding S1 domain protein [Pedobacter heparinus DSM 2366]
Length = 775
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 124/554 (22%), Positives = 226/554 (40%), Gaps = 97/554 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ S K GL E L L + LE K PE A F
Sbjct: 106 KPKRKTRASEARKKGL-----------EPLALFI--------LEQAKTDPEIEAGKFLND 146
Query: 269 MFN--SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQF 326
S + L GAR + A ++ R +R+ F AV SA+ +
Sbjct: 147 ELGVGSLEDALAGARDIIAELVNENAEARTAMRNYFQQKAVFK--------SAVIKGKEE 198
Query: 327 AGVKWLR----EKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSD 382
G+K+ ++PL+ + L I++ E E +L++ +PE+ D L
Sbjct: 199 EGIKYKDYFDWQEPLKNAPSHRVLAIRRGENEAILKLE-AMPEE-------DGAIRILES 250
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
K DQ +L ++D+ L PSM E R+L +A + + + +
Sbjct: 251 QFVKGNNACADQVKLAIQDSYKRLLGPSMETEIRNLSKEKADEEAIRVFAENARQLLLAA 310
Query: 443 PYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVR 501
P +K+ VLA PG + V LD G++++ T+ +
Sbjct: 311 PMGQKN------------VLAI--DPGFRTGCKVVCLDKQGKLLE-----NATIYPHTGQ 351
Query: 502 DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD 561
K D ++ + ++ V +G + T+ ++ E+ + + +
Sbjct: 352 GNVKKAGD--KIKELCAKYEIEAVAIG----NGTAGRET--EVFVRALN---------IP 394
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREIL 621
+ +V E+ +Y S ++ ++ P Q V+ AV++GR L +PLA + + +
Sbjct: 395 GIVVVMVSENGASIYSASEVAREEFPTQDITVRGAVSIGRRLMDPLAELVKI-----DPK 449
Query: 622 SWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAA 681
S + ++ + ++ ++ ++ N VG+++N A + L ++SGLGP+ A
Sbjct: 450 SIGVGQYQHDVDQNKLQASLDDTVMSCVNAVGVELNTASKQ-----VLAYVSGLGPQLAQ 504
Query: 682 SLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIH 741
++ GA R+ LG K F A GFLR+R + +LD + +H
Sbjct: 505 NIVAYRNEHGAFKNRESLKKVPRLGDKAFEQAAGFLRIRNAEA---------VLDSSGVH 555
Query: 742 PESYGLAQELAKEV 755
PE Y L ++A+++
Sbjct: 556 PERYALVHKMARDL 569
>gi|423421591|ref|ZP_17398680.1| hypothetical protein IE3_05063 [Bacillus cereus BAG3X2-1]
gi|401097253|gb|EJQ05281.1| hypothetical protein IE3_05063 [Bacillus cereus BAG3X2-1]
Length = 722
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 205/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P E A F S++ LQGA+ + A +S R ++R+ ++S+
Sbjct: 139 KENPAEKAMEFVDGEKEVESAEDALQGAQDIIAELVSDNASYRSWIRNTTFRKGIMSSSV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + E+PL+K + L + + E+E +L+V++ P + +N+
Sbjct: 199 KDKEKDEKNIYEMY----YDYEEPLQKIVPHRVLAMNRGEKEDVLRVSVVTPIEEINQFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSA +L ++D + PS+ +E R ++ A+ + +
Sbjct: 255 H---KKMIRDEASKSAHYV----QLAIEDGYKRLIQPSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLSVVDDTGKVLNIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
+ ++ + +++L + +Q ++ +G S + E I +++
Sbjct: 355 HPPVRKYEDAK---------KKVLSIIDKYQVEMIAIGNGTASRET-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
RDV + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKRDVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R + LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEDGKFTKRTELKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|422412350|ref|ZP_16489309.1| protein YhgF [Listeria innocua FSL S4-378]
gi|313619754|gb|EFR91362.1| protein YhgF [Listeria innocua FSL S4-378]
Length = 725
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/495 (21%), Positives = 217/495 (43%), Gaps = 86/495 (17%)
Query: 271 NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST---CPTPDGDSAIDSFHQFA 327
S++ LQGA + A +IS EP R+++R+ ++ + D + +++F
Sbjct: 156 TSAEDALQGAHEIIAEQISDEPTFREWIRNFTRKFGMIESRAKNAEADEKGVYEMYYEFN 215
Query: 328 GVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGV--S 385
+ + K + L + E+E +L+V +++ K+F YL + V +
Sbjct: 216 EM-------IGKVASHRILAFNRGEKEDILRVQVQV---DTTKIF-----QYLFEKVIQN 260
Query: 386 KSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ 445
+++ E IL DA F+ P++ +E R ++ +A+ + + + L K+ + P
Sbjct: 261 RNSATRTYVEEAIL-DAYKRFIGPAIEREIRGELTDKAEEQAIHIFSENL-RKLLLQPPL 318
Query: 446 RKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQS 505
+ + D P C F +LD +G+V+++ G + + R ++
Sbjct: 319 KGKIILGVD----PAFRTGC--------KFSVLDQTGKVLEI---GVVYPHTAKARRPEA 363
Query: 506 KKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSI 565
K +++ + + +Q V+ +G S + + I +++ E + + I
Sbjct: 364 K----QKIAEILSTYQVEVIAIGNGTAS-----RETEQFIVEVIRESKSNAYY-----CI 409
Query: 566 VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR--- 618
V +E+ +Y S + ++ P + + AV++GR LQ+PLA + + G G+
Sbjct: 410 V--NEAGASVYSASETAREEFPDYQVEERSAVSIGRRLQDPLAELVKIDPKSVGVGQYQH 467
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
++ +L F V+ NQVG+++N A + LQ+++GL
Sbjct: 468 DVAQKRLNETLTF------------VVETAVNQVGVNVNTA-----SASLLQYVAGLNKT 510
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++++ G+ +RK+ LG K + ++GFLR+ LD T
Sbjct: 511 VANNIRKYREENGSFTSRKELKKVPRLGAKSYEQSIGFLRILEGENP---------LDKT 561
Query: 739 RIHPESYGLAQELAK 753
IHPESY A+++ K
Sbjct: 562 AIHPESYKAAEQIVK 576
>gi|300777665|ref|ZP_07087523.1| YhgF like protein [Chryseobacterium gleum ATCC 35910]
gi|300503175|gb|EFK34315.1| YhgF like protein [Chryseobacterium gleum ATCC 35910]
Length = 707
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 116/520 (22%), Positives = 217/520 (41%), Gaps = 81/520 (15%)
Query: 261 MASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTPDGDS 318
+AS + + S + LQGAR + A I+ VRK +R +F AV+++ +
Sbjct: 138 LASKYLSSEVTSEEEALQGARDIMAEWINENMYVRKNLRRLFQRKAVITSKVVKAKKDEE 197
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDCKE 377
F Q+ +W E+ L + + L + +AE E ++ + + E++++
Sbjct: 198 EAQKFSQY--FEW--EESLNRTPSHRLLAMLRAEAEGFVKTNVGIDKEEAID-------- 245
Query: 378 HYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWN 437
++ + KS +DQ L +KD+ L P++ E +A + + + L
Sbjct: 246 -FIEKAIIKSNNESSDQISLAIKDSYKRLLEPAISNETLQEAKEKADKKAIEIFSENLSQ 304
Query: 438 KVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLR 496
+ P K R+LA PG + V LD G D+L +
Sbjct: 305 LLLAPPLGEK------------RILAI--DPGYRSGCKVVCLDEKG---DLLHNETIYPH 347
Query: 497 S-QNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ QN KK ++ M++ + A+++ + + I K+ + P
Sbjct: 348 APQNESGMAMKK------IRSMVNAYN----IEAISIGNGTASRETEFFIKKIAFDKP-- 395
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL-- 613
L + E+ +Y S+I+ D+ P V+ AV++GR L +PLA + +
Sbjct: 396 -------LQVFVVSEAGASVYSASKIARDEFPSYDVTVRGAVSIGRRLSDPLAELVKIDA 448
Query: 614 --CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
G G+ L+N L + ++ N VG+++N A + L +
Sbjct: 449 KSIGVGQYQHDVDQTQLKNEL---------DSTVMKCVNSVGINLNTASK-----SLLSY 494
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+SG+G + A ++ GA RK LG K F A F+R++ +
Sbjct: 495 VSGIGEKMAENIVNYRTENGAFEDRKQLKKVPRLGDKAFQQAAAFVRIKNARNP------ 548
Query: 732 IDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDAL 771
LD++ +HPE+YG+ +++AK++ + E N ++ AL
Sbjct: 549 ---LDNSAVHPEAYGIVEKMAKDLGIKTNELIANKEKIAL 585
>gi|116511133|ref|YP_808349.1| transcriptional accessory protein [Lactococcus lactis subsp.
cremoris SK11]
gi|116106787|gb|ABJ71927.1| Transcriptional accessory protein [Lactococcus lactis subsp.
cremoris SK11]
Length = 713
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 144/680 (21%), Positives = 271/680 (39%), Gaps = 143/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ E + I D D L +R
Sbjct: 31 VPFIARYRKEATGSL--------------DEVE----------IKKIIDEDNLLTKLSER 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+A+ S + EE + L DS+ + AAE EV+D L+ P
Sbjct: 67 KTAVLS----KIEELGK-------------LTDSLKTQILAAEKLTEVED------LYLP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK KR TK + + GL+ +A ++ L
Sbjct: 104 ----------YKE-KRRTKATIAKENGLFPLAQLIVKNAANL------------------ 134
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
EE A F F ++Q L+GA + + IS + +R ++ +N+++++ D
Sbjct: 135 --EEEAEKFVNENFTTAQKALEGAVDILSEAISEDARLRSWLTGEIKNNSLLTSSLKKD- 191
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
A+D F EK + + + + L + + E+ +L V + ED + + F+
Sbjct: 192 --AVDEKQVFQMYYKFSEK-VSELPNYRVLALNRGEKLGILSVKFENNEDKILRYFA--- 245
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
++ A N ++ +KDA+ L+P+M + R+ ++ +A++ + +GK L
Sbjct: 246 --------ARFAAQNNPMMQVAIKDAVKKKLIPAMERSIRTELTEKAEASAIEVFGKNLK 297
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
N + V P + + + + P + ++D +G++ ++ T +
Sbjct: 298 NLLLVAPLKGR--------------VVMGFDPAYRTGAKLAIVDETGKL--LMTTVIYPV 341
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ N K D L KF+ ++ +++ +G N + + + + K E + D
Sbjct: 342 KPANAGQIAQAKKD---LAKFIREYGVNMIAIG--NGTASRESESFVSEVLK--ENNFSD 394
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCG 615
V + V ES +Y S ++ ++ P + A+++ R LQ+PLA + +
Sbjct: 395 VYY-------VIVSESGASIYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEP 447
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
+ ++ E LT + +D + ++ + L ++GL
Sbjct: 448 KAIGVGQYQHDVSEKKLTEN----------LDFVVETVVNQVGVNVNTASPSLLSHVAGL 497
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ + GA+ TR + G K F A GFLR+ + L
Sbjct: 498 NKSLAQNVVKYREENGALKTRNELKKVPRWGAKAFEQAAGFLRIPEGK---------NFL 548
Query: 736 DDTRIHPESYGLAQELAKEV 755
D+T +HPESY + ++L E+
Sbjct: 549 DNTGVHPESYKVTEQLLTEI 568
>gi|313889985|ref|ZP_07823622.1| Tex-like protein N-terminal domain protein [Streptococcus
pseudoporcinus SPIN 20026]
gi|416852804|ref|ZP_11909949.1| Tex-like protein N-terminal domain protein [Streptococcus
pseudoporcinus LQ 940-04]
gi|313121643|gb|EFR44745.1| Tex-like protein N-terminal domain protein [Streptococcus
pseudoporcinus SPIN 20026]
gi|356740293|gb|EHI65525.1| Tex-like protein N-terminal domain protein [Streptococcus
pseudoporcinus LQ 940-04]
Length = 713
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 193/879 (21%), Positives = 344/879 (39%), Gaps = 204/879 (23%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL +S+ I L L + IPFIA YRKE +L +EV
Sbjct: 13 SNDLQLSQKQIESVLALTA-EGNTIPFIARYRKEVTGNL------DEV------------ 53
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQ---LFD 169
++ AI D +K LQ+RK ET LA Q+ L D
Sbjct: 54 ------MIKAIIDQEKSLRNLQERK--------------------ETVLAKIQEQGKLTD 87
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
S+ S+ AAE +V++ L+ P E KR TK + +AGL+ +A
Sbjct: 88 SLKASILAAEKLADVEE------LYLPYKE-----------KRRTKATIAREAGLFPLAR 130
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEIS 289
++ L E+ A F C F + ++VL GA + +S
Sbjct: 131 LILQNANNL--------------------EKEAEGFVCDTFPNLESVLSGAIDILVEAMS 170
Query: 290 CEPCVRKYV-RSIFMDNAVVSTC--PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWL 346
+ +R +V I+ +++ S T D ++ FA + K + + L
Sbjct: 171 EDVKLRSWVYNEIWTYSSITSQVKDKTLDDKQVFQIYYDFAD-------KVSKMQGYRTL 223
Query: 347 LIQKAEEEKLLQVTIKLPEDSLNKLFS---DCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
+ + E+ +L+V + D + + FS K Y+ D +++ +
Sbjct: 224 ALNRGEKLGILKVGFEHHFDKMIRFFSVRFKEKNGYIED---------------VIQQTI 268
Query: 404 DNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLA 463
++P+M + R+ ++ A+ + + + L + + V P + K +
Sbjct: 269 KKKIVPAMERRIRTELTEAAEDGAITLFSENLRHLLLVSPLKGK--------------MV 314
Query: 464 CCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQP 522
+ P + ++D +G+++ + SQ + Q+KK+ L + D++
Sbjct: 315 LGFDPAFRTGAKLAVVDQTGKLMTTQVIYPVAPASQ-AKIAQAKKD----LAALISDYKI 369
Query: 523 HVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRIS 582
++ +G S S E DV + S V +ES +Y S ++
Sbjct: 370 EIIAIGNGTASRES-------------EAFVADVLKDFPNCSYVIVNESGASVYSASELA 416
Query: 583 SDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPD 635
+ P + A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 417 RHEFPDLSLEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSDNLDF---- 472
Query: 636 EKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFT 695
V+ V NQVG+++N A L +SGL + ++ + G I +
Sbjct: 473 --------VVDTVVNQVGVNLNTA-----SSVLLSHVSGLNKTISENIVKYREENGRIKS 519
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
R + LG K F A GFLR+ + ++LD+T +HPESY KE+
Sbjct: 520 RAEIKKVPRLGAKAFEQAAGFLRIPNAE---------NILDNTGVHPESY----PAVKEL 566
Query: 756 YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIH 815
+ R DL+D A +I+ +KT D I ETL I +L+
Sbjct: 567 FKRLAISDLDDQARAKLKSID--------MKTMSQDLGI-------GLETLTDIINDLLK 611
Query: 816 GFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLM 875
+D R+ ++ P ++ + L G+ ++ TVR V A + G++
Sbjct: 612 PGRDLRDDFQTPVLRQDVLDLKD-----LIIGQKLEGTVRNVVDFGAFVDIGVHEDGLIH 666
Query: 876 KEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
+ S + + S L GD++T + I +R++V L
Sbjct: 667 ISEMSQTFVNHP-SQVLSVGDVVTVWVSKIDLDRHKVNL 704
>gi|354603867|ref|ZP_09021860.1| hypothetical protein HMPREF9450_00775 [Alistipes indistinctus YIT
12060]
gi|353348299|gb|EHB92571.1| hypothetical protein HMPREF9450_00775 [Alistipes indistinctus YIT
12060]
Length = 714
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 136/632 (21%), Positives = 247/632 (39%), Gaps = 110/632 (17%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
RPKR T+ + + GL +A+ + P+ +A F
Sbjct: 110 RPKRRTRATVAREKGLEPLAAML-------------------MRQDGARPDRLAERFVGG 150
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ Q L GA + A +S R +R +F V+S + + +
Sbjct: 151 EVHDLQEALDGACDIIAEWVSESEAARSAMRRLFTREGVISARVVKGKEQEGAKYSDY-- 208
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDS-----LNKLFSDCKEHYLSDG 383
W +PLR+ + L + +AE E +++++ LP++S L ++F
Sbjct: 209 FDW--SEPLRRVAAHRLLAMVRAEREGFIKLSV-LPDESAAVEQLERIF----------- 254
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+ ++ E ++D L PSM E + RA + + + L + P
Sbjct: 255 IKRNPSPVRPLVEAAVRDGYKRLLKPSMEGETLTEAKARADEESIKVFAENLRQLLLAAP 314
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRD 502
+K RVLA PG + V LD G + L ++ +
Sbjct: 315 LGQK------------RVLAI--DPGFRTGCKVVCLDGQGNL----------LHNETIFP 350
Query: 503 QQSKKNDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV--G 557
+K D E RL + +++ V +G T+ ++ E+ R+V G
Sbjct: 351 HPPQKRDAEAMQRLASLVDEYRIDAVAVG----DGTAGRE---------TEQLVRNVRFG 397
Query: 558 HEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPG 617
HE+ + E +Y S ++ P V+ AV++GR L +PLA + +
Sbjct: 398 HEVQVFMV---SEDGASVYSASAAGREEFPNYDVTVRGAVSIGRRLIDPLAELVKI---- 450
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ S + ++ + P++ G ++ V+ N+VG+++N A L ++SGLGP
Sbjct: 451 -DPKSIGVGQYQHDVNPEKLRGGLDSVVESCVNRVGVNLNTASKHL-----LTYVSGLGP 504
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
A ++ G +R+D + LG K F GFLR+ + LD+
Sbjct: 505 SLAQNIVEYRAANGDFASRRDLLKVSRLGAKAFEQCAGFLRIPQGKHP---------LDN 555
Query: 738 TRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKE- 796
+ +HPE+Y + + +A ++ R ++ L+ E L I+ R D + L + E
Sbjct: 556 SAVHPEAYPVVERMAADLGVR-VQELLSSAE--LRAKIDLKRYVTDTIGLPTLTDILAEL 612
Query: 797 -KKRENKRETLYLIRRELIHGFQDWRNQYKEP 827
K + R T+ R +H D R + P
Sbjct: 613 AKPGRDPRSTIRTFRFADVHSLDDLREGMELP 644
>gi|363896442|ref|ZP_09322993.1| hypothetical protein HMPREF9624_01737 [Oribacterium sp. ACB7]
gi|361960728|gb|EHL13961.1| hypothetical protein HMPREF9624_01737 [Oribacterium sp. ACB7]
Length = 720
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 190/885 (21%), Positives = 336/885 (37%), Gaps = 185/885 (20%)
Query: 51 KEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFER 110
K DLS+ + + + LL + +PFIA YRKE L ND+ R
Sbjct: 6 KIAEDLSLKKMQVEAAVQLLD-EGNTVPFIARYRKEATHGL-------------NDEELR 51
Query: 111 TPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDS 170
+ + L + +L+ ++R+S L S +A +L D
Sbjct: 52 S----LEEKLQYLRNLE------ERRESILNS------------------IAEQGKLTDE 83
Query: 171 ISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASK 230
+ +EAA+T ++D L+ P YK+ +R+
Sbjct: 84 LKAQIEAADTAVRLED------LYLP----------YKKKRRTR---------------- 111
Query: 231 FGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKC--AMFNSSQAVLQGARHMAAVEI 288
G + + GL E + + P P + A N+ +S + L A+ + A E
Sbjct: 112 -GMIAREKGL----EGLAKAILTPGINPVKEAENYLSEEKEVHSVEEALNYAKDILAEEF 166
Query: 289 SCEPCVRKYVRSIFMDNAVVSTCP-----TPDGDSAIDSFHQFAGVKWLREKPLRKFEDA 343
S R+++R+ M+ +S+ PD + F E+ ++
Sbjct: 167 SENASYREWIRNKTMELGSISSSKKDAEENPDAKTYEMYFDY--------EEKVKTIPGY 218
Query: 344 QWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
+ L I + E+EK+L V + P++ + YL K Q + L+ + L
Sbjct: 219 RTLAINRGEKEKVLSVKLNFPQEEIIA--------YLEKQAGKDLQ--GENLRLLQEAVL 268
Query: 404 DNF---LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPR 460
D+F + PS+ E R++++ +A+ + + L + P K
Sbjct: 269 DSFKRLISPSIETEIRNILTEKAEDGAIAIFADNLKQLLMQAPIVGK------------- 315
Query: 461 VLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMD 519
+ W PG + ++D +G+V+D ++Q K + K +
Sbjct: 316 -VVLGWDPGFRTGCKIAVVDPTGKVLDTTVIYPTPPKNQ-------VKEAMAVIHKLIEK 367
Query: 520 HQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENS 579
H+ ++ LG S S K +I + E V + V +E+ +Y S
Sbjct: 368 HKVDIIALGNGTASRESEK-----VISDYIHETKSKVQY-------VIVNEAGASVYSAS 415
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPD 635
++++++ P + + ++ R LQ+PLA + + G G+ LE L
Sbjct: 416 KLATEEFPNFDTGERSSTSMARRLQDPLAELVKIEPKAIGVGQYQHDMNQNKLEEQLN-- 473
Query: 636 EKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFT 695
+ D N VG+D+N A A L +ISG+ A ++ GA +
Sbjct: 474 -------NTVEDCVNHVGVDLNTA-----SAALLSYISGINKTLAKNIVVYREENGAFKS 521
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
RK+ + LG K F + GFLR+R + +LD T +HPESY +EL +
Sbjct: 522 RKELLKVAKLGPKAFEQSAGFLRIREGKE---------VLDRTSVHPESYQKTKELLALL 572
Query: 756 YNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIH 815
+ + +D +M + P +K E+K E TL I L
Sbjct: 573 NLNEKDIAEGKGKDIAKM----ISALPGGMKAI-------EEKLEIGSFTLKDIVEALAK 621
Query: 816 GFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLM 875
+D R P + +S L EG +++ TVR V A + G++
Sbjct: 622 PGRDPREDVPAPVLRSDVLELSD-----LKEGMILEGTVRNVLDFGAFVDIGVHQDGLVH 676
Query: 876 KEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE 920
S + L D + GDI+ KI S+ R ++ L +++E
Sbjct: 677 ISALSKKFVKHPL-DVVKLGDIVKVKILSVDMERKKISLSMKDAE 720
>gi|225387171|ref|ZP_03756935.1| hypothetical protein CLOSTASPAR_00923 [Clostridium asparagiforme
DSM 15981]
gi|225046719|gb|EEG56965.1| hypothetical protein CLOSTASPAR_00923 [Clostridium asparagiforme
DSM 15981]
Length = 715
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 148/683 (21%), Positives = 280/683 (40%), Gaps = 154/683 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL ND+ R DLD++ L+
Sbjct: 31 IPFIARYRKEVTGSL-------------NDEVLR--------------DLDERLRYLRN- 62
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+ R E+ I D+ ++L + + + AA T V+D L+ P
Sbjct: 63 -------LEDRKEQVIASIRDQ------EKLTPELEQQIRAAATLVAVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK PKR T+ + + GL +A + + +Q++ KE
Sbjct: 104 ----------YK-PKRRTRATIAKEKGLEPLA-------DLIFMQMA-----------KE 134
Query: 257 TPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFM-DNAVVSTCPT 313
E+ A+ + + + + GA+ + A +S R Y+RS M + + ST
Sbjct: 135 PLEKAAAPYISQEKGVETVEEAISGAKDILAERVSDNAQYRTYIRSATMREGTLQSTAKD 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+ ++++ + E+P+RK + L + + E EK L V + PE+++ +
Sbjct: 195 EKAQTVYETYYNY-------EEPIRKAAGHRVLALNRGENEKALAVKVTAPEETILRYLE 247
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
K+ + + + L + +++D+ + + PS+ +E R+ ++ +A+ + +GK
Sbjct: 248 --KQVIVRENPYTTPAL-----KAVVQDSYERLIAPSIEREVRNELTEKAEEGAIKVFGK 300
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGC 492
L + P + + W P + ++D +G+V+D +
Sbjct: 301 NLEQLLMQPPIVGR--------------VVLGWDPAFRTGCKLAVVDGTGKVLDTVV--I 344
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
QN R ++SKK + + K+ +V ++ N + + + I + K ++E
Sbjct: 345 YPTAPQN-RVEESKKILKNLIKKY------NVSLISVGNGTASRESEQIIVDLLKEIKE- 396
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
++ V +E+ +Y S++++++ P + AV++ R LQ+PL+ +
Sbjct: 397 ---------QVQYVIVNEAGASVYSASKLATEEFPQYDVGQRSAVSIARRLQDPLSELVK 447
Query: 613 L----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ G G+ L L G++E D N+VG+D+N A +
Sbjct: 448 IDPKSIGVGQYQHDMNQKRLGEALG-----GVVE----DCVNRVGVDLNTA-----SASL 493
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L++ISG+ A ++ GA R+ + LG K F GF+R+ G+
Sbjct: 494 LEYISGISKALAKNIVAYREENGAFSNRRQLLKVAKLGPKAFEQCAGFMRI-LGGE---- 548
Query: 729 SQFIDLLDDTRIHPESYGLAQEL 751
+ LD T +HPESY A L
Sbjct: 549 ----NPLDATSVHPESYKAAGAL 567
>gi|415886158|ref|ZP_11547981.1| S1 RNA-binding domain-containing protein [Bacillus methanolicus
MGA3]
gi|387588811|gb|EIJ81132.1| S1 RNA-binding domain-containing protein [Bacillus methanolicus
MGA3]
Length = 729
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 156/706 (22%), Positives = 289/706 (40%), Gaps = 158/706 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE+ +L +EV + ++ ++W LQ
Sbjct: 39 VPFIARYRKEQTGAL------DEVQ---------------------LRNIIERWQYLQN- 70
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++R EE R I ++ +L +L I K+++ E E +L+ P
Sbjct: 71 -------LEQRKEEVIRLIAEQGKL--TPELQSQIEKAIKLQEVE----------DLYRP 111
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A L+ K G
Sbjct: 112 ----------YKQ-KRRTKATIAKEKGLEPLAEWL----------LTFPKTG-------- 142
Query: 257 TPEEMASNFKC--AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
+ EE A+ F NS + L GA+ + A +S +P RK++R + ++ +
Sbjct: 143 SVEEKANEFLSEEKELNSIEDALAGAKDIIAEWVSDDPESRKWIRGETAKSGIIESVLK- 201
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
D+ D + + + E+P+ K + L + + E+E +++V IK ++K+
Sbjct: 202 --DAEKDE-KKVYEMYYEYEEPIEKIVPHRILALNRGEKEDVIRVQIK---PDIHKILHF 255
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
+ ++ D S +A L D E D + PS+ +E R+ ++ +A+ + + +
Sbjct: 256 LHKKWIKDEQSITASLVADAVE----DGYKRLIQPSIEREIRNELTEKAEERAIHIFSEN 311
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFTGC 492
L N + P + K I + A R C +D +G+V +DV++
Sbjct: 312 LRNLLLQPPLKGK---IVLGVDPAYRT-GC---------KLAAVDETGKVLHIDVIYPHP 358
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
+++ R E+ +K + D +V +G N + + + I K V+E
Sbjct: 359 PVSKTKEAR---------EKFIKILRDFNIDIVAIG--NGTASRETEQFVAEILKEVKE- 406
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
E+ + +E+ +Y S ++ ++ P + + AV++ R LQ+PLA +
Sbjct: 407 ---------EIFYLIVNEAGASVYSASDLAREEFPDLQVEERSAVSIARRLQDPLAELVK 457
Query: 613 L----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ G G+ ++ KL F V+ NQVG+++N A
Sbjct: 458 IDPKSVGVGQYQHDVSQKKLSESLTF------------VVETAVNQVGVNVNTA-----S 500
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
+ LQ+++GL A ++ + G +R LG K + A+GFLRV +
Sbjct: 501 PSLLQYVAGLSKTVANNIVKYREEQGKFTSRAQLKKIPRLGAKTYEQAIGFLRVIDGEEP 560
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDAL 771
D T IHPE+Y + ++L + + + E ND ++AL
Sbjct: 561 ---------FDRTGIHPENYPVVKKLLENLGFKTDEIGTNDLKNAL 597
>gi|229028095|ref|ZP_04184244.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus AH1271]
gi|228733217|gb|EEL84050.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus AH1271]
Length = 656
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 202/500 (40%), Gaps = 78/500 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 73 KEDPNQKAVEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSSV 132
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D +
Sbjct: 133 KDEEKDEKNIYEMY----YSYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVDEIVTFL 188
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSA L ++D + S+ +E R ++ A+ + +
Sbjct: 189 Y---KKVIRDNDSKSAHYVK----LAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 241
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 242 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 288
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E
Sbjct: 289 ------HPPVRKYEDAKT---KVLSIIDKYQVEMIAIGNGTASRES-------------E 326
Query: 551 EHPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
E DV + E+ + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA
Sbjct: 327 EFIVDVLQNVKQEVFYIIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAE 386
Query: 610 VATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ + G G+ L LT V+ NQVG+++N A
Sbjct: 387 LVKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----S 432
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 433 VALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP 492
Query: 726 ASSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 493 ---------LDRTGIHPEQY 503
>gi|68059341|ref|XP_671656.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56488032|emb|CAI01478.1| hypothetical protein PB300226.00.0 [Plasmodium berghei]
Length = 335
Score = 82.8 bits (203), Expect = 1e-12, Method: Composition-based stats.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 39/275 (14%)
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH-PR 554
+ +++ +Q+ ND L F+ +P ++ C ++D +IF ++
Sbjct: 14 KEKSIIEQEQIANDINIFLSFLKKMKPDII--------CVGIRDIPSYMIFSYIQNMLNN 65
Query: 555 DVGHEMDEL---------SIVYGDESL---PRLY------ENSRISSDQLPGQKGNVKRA 596
D +E D SI Y + S+ LY N + S+D
Sbjct: 66 DRSNEKDYFFSKAQHSNSSIPYNNTSIVIAENLYIPFIVTNNLKYSTDLTTKYSREALLC 125
Query: 597 VALGRYLQNPLAMVATLC-GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLD 655
++L RY+QNPL V +L G + +L+ L L+ ++ + + ++++D+ N+ G D
Sbjct: 126 LSLCRYVQNPLDAVLSLFEGENKNMLNICLHDLQKYICGYKLEHVFYRIILDIVNKTGCD 185
Query: 656 INLAIHREWQFA-PLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG----LGKKVF 710
IN ++ F L +ISGLG RK L + L+ + TR+D +T +G V+
Sbjct: 186 INFVKKKKHYFGNALSYISGLGLRKKEELMK-LLHNRNLNTREDLLTLSSNKNLIGNCVY 244
Query: 711 VNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
+N F+R+ +G S++I+ LD+TRIHP +Y
Sbjct: 245 MNCASFIRIIGTG-----SEYIEALDNTRIHPINY 274
>gi|403669609|ref|ZP_10934800.1| hypothetical protein KJC8E_12266 [Kurthia sp. JC8E]
Length = 676
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 149/705 (21%), Positives = 281/705 (39%), Gaps = 147/705 (20%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
G +L I+ + + L+ +PFIA YRKE SL +EV
Sbjct: 8 GKELKIAPKQVTTVIQLME-DGNTVPFIARYRKEATGSL------DEVQ----------- 49
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKS-ALQSYYKKRYEEESRRIYDETRLALNQQLFDSI 171
+ AI D + L+ RK LQS EE+ + L +
Sbjct: 50 -------IKAIEDRHHYLVQLENRKKDVLQSI-----EEQGK-------------LTSEL 84
Query: 172 SKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKF 231
+ AA ++V+D L+ P YK+ KR TK + + GL +A K
Sbjct: 85 QAKIAAATILKQVED------LYRP----------YKQ-KRRTKATIAKEQGLEPLAEKM 127
Query: 232 GYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCE 291
L+ P ++ ++A+ + + Q V+QGA+ + A + E
Sbjct: 128 -------------------LQYPVDSLSKLAAPYVSEQLDEEQ-VIQGAKDILAERFADE 167
Query: 292 PCVRKYVRS-IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQK 350
+R +R + + + +T + D Q + + E+PL K + L I +
Sbjct: 168 VKIRDMIRQWTWREGTITTTVKKEEQDE-----KQIFEMYYAYEEPLSKIVPHRTLAINR 222
Query: 351 AEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPS 410
E+E +L+V+I P + K+ + Y + K+ E ++D+ + PS
Sbjct: 223 GEKEDILRVSITAP---IVKIEEAMRRFY----IPKTTSPVRVAIEEAIEDSYKRLIAPS 275
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG- 469
+ +E R+ ++ +A+ + + + L + + P + K P
Sbjct: 276 IEREVRNELTEKAEGQAIHIFSENLRSLLLQPPLKGK--------------YVLGLDPAY 321
Query: 470 KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGA 529
+ ++D +G+++++ + + ++SK R++ ++ P ++ A
Sbjct: 322 RTGCKLAVVDDTGKMLEI---AVIYPHPPKAKPEESK-----RVVTDLLKRYPISII--A 371
Query: 530 VNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQ 589
+ S + + + + +++E + + V E+ +Y S + ++ P
Sbjct: 372 IGNGTASRESEAF--VASLLQELQSEAAY-------VIVSEAGASVYSASEKAREEFPEL 422
Query: 590 KGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVT 649
+ + A+++ R LQ+PLA + + + ++ + LT + G I + V
Sbjct: 423 QVEQRSAISIARRLQDPLAELVKIEPKAVGVGQYQHDVSQKKLT--DSLGFIVETAV--- 477
Query: 650 NQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKV 709
NQVG+D+N A + LQ++SGL A ++ + G R LG K
Sbjct: 478 NQVGVDVNTA-----SASLLQYVSGLSKTVAENIVQMRSEVGKFTARTQLKKVPRLGAKT 532
Query: 710 FVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+ A+GFLRV LD T IHPESY LA++L KE
Sbjct: 533 YEQAIGFLRVPEGKNP---------LDATGIHPESYALAEQLLKE 568
>gi|383122923|ref|ZP_09943612.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides sp. 1_1_6]
gi|251841978|gb|EES70058.1| competence protein ComEA helix-hairpin-helix repeat region
[Bacteroides sp. 1_1_6]
Length = 710
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/557 (21%), Positives = 225/557 (40%), Gaps = 104/557 (18%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR T+ + + GL E L + + L++ +P T + A+ F
Sbjct: 106 KPKRKTRAEAARQKGL-----------EPLAMIMMLQR------EPNLTAK--AATFVKG 146
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
++ L+GAR + A +++ C R +R+ F A ++ + + +
Sbjct: 147 DVKDTEDALKGARDIIAEQVNENECARNAIRNQFTRQAEITAKVVKGKEEEAAKYRDY-- 204
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+ + L++ + L I++AE E LL+V+I P+D C E V +
Sbjct: 205 --FDFSESLKRCTSHRLLAIRRAESEGLLKVSIS-PDDEA------CLERLDRQFVHGNN 255
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ + +E DA L PS+ E + +A + + + L + P +K
Sbjct: 256 ECSHQVKEAT-ADAYKRLLKPSIETEFAAQSKEKADDEAIRVFTENLRQLLLSPPLGQK- 313
Query: 449 NDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
RVLA PG + V LD+ G + L ++N+
Sbjct: 314 -----------RVLA--IDPGFRTGCKVVCLDAQGNL----------LHNENIYPHPPVN 350
Query: 508 NDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM--DE 562
E +L K + ++ + +G N + + +D + H+ +
Sbjct: 351 KTGEAASKLRKMIEAYEIEAISIG--NGTASRETEDF--------------INHQTFDRQ 394
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR 618
+ + E +Y S+I+ D+ P V+ AV++GR L +PLA + + G G+
Sbjct: 395 IPVFVVSEQGASIYSASKIARDEFPDYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQ 454
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPR 678
L+ L +Q + + N VG+++N A L +ISGLGP+
Sbjct: 455 YQHDVDQTKLKKAL---------DQTVENCVNLVGVNLNTASSH-----LLTYISGLGPQ 500
Query: 679 KAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDT 738
A ++ GA +RK+ + +G K F GFLR+ + LD+T
Sbjct: 501 LAQNIVNFRAENGAFSSRKELMKVPRMGAKAFEQCAGFLRIPGAKNP---------LDNT 551
Query: 739 RIHPESYGLAQELAKEV 755
+HPESY + +++AK++
Sbjct: 552 AVHPESYHIVEQMAKDL 568
>gi|149201797|ref|ZP_01878771.1| S1 RNA binding domain protein [Roseovarius sp. TM1035]
gi|149144845|gb|EDM32874.1| S1 RNA binding domain protein [Roseovarius sp. TM1035]
Length = 775
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 132/635 (20%), Positives = 251/635 (39%), Gaps = 122/635 (19%)
Query: 149 EEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYK 208
E E+RR+ + +L + +++S+ AET+ ++D+ L F
Sbjct: 67 ELEARRVAILNSIKDQGKLTEPLARSIAGAETKAVLEDIYLPF----------------- 109
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCA 268
+PKR TK + GL + + L + PE++A+ +
Sbjct: 110 KPKRRTKAMIARENGLEPLLRRI-------------------LAERSAVPEDLAAGYLSE 150
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+ + L+GAR + A E++ + +R AV+S P + F +
Sbjct: 151 SVATVKEALEGARDILAEELTENATLLGRLREFMRAEAVISARVLPGKEEVGAKFSDY-- 208
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVS--- 385
+ +P K + L I +A +E++ VT+ + D + G+
Sbjct: 209 --FDHREPWAKIPAHRALAILRAAKEEI--VTLDIAPDPDTGALRAVGMIEATIGIPGNA 264
Query: 386 ------KSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKV 439
+S W + +L L SM + + RA + + + L + +
Sbjct: 265 PGDIWLRSVAAWTWRVKLSL----------SMYVDLMGELRNRAHDEAITVFARNLKDLL 314
Query: 440 SVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQ 498
P A PR PG + ++D++G++++ T
Sbjct: 315 LAAP-------------AGPRP-TLGLDPGIRTGVKAAVVDATGKLIE-------TATLY 353
Query: 499 NVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGH 558
+ + + Q +L+ + H ++ +G N + + + + K++ P+
Sbjct: 354 PFQPKNDLRGAQVAVLEMVRKHGVELIAIG--NGTASRETERMVAEALKLL---PQGAKR 408
Query: 559 EMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGR 618
M V E+ +Y S +++ + PG +++ AV++ R LQ+PLA + +
Sbjct: 409 PMS----VIVSEAGASVYSASELAAKEFPGLDVSLRGAVSIARRLQDPLAELVKITPQ-- 462
Query: 619 EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFISGLGP 677
S + ++ + ++ V+ D N VG+D+N+A APL ++GLG
Sbjct: 463 ---SIGVGQYQHDVDQRRLVQALDAVVEDAVNAVGVDLNMA------SAPLLARVAGLG- 512
Query: 678 RKAASLQRSLVR----AGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
ASL +++V GA +RK + GLG K F GFLR+R S +
Sbjct: 513 ---ASLAQAIVAHRDAEGAFPSRKALLKVAGLGPKAFEQCAGFLRIRDSAEP-------- 561
Query: 734 LLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDE 768
LD T +HPE+YG+A+ + + RDI + E
Sbjct: 562 -LDATSVHPEAYGVARRIV-QACGRDIRAIMGTPE 594
>gi|373107174|ref|ZP_09521473.1| competence protein ComEA helix-hairpin-helix repeat region
[Stomatobaculum longum]
gi|371651004|gb|EHO16438.1| competence protein ComEA helix-hairpin-helix repeat region
[Stomatobaculum longum]
Length = 730
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 147/696 (21%), Positives = 280/696 (40%), Gaps = 164/696 (23%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL +D+ RT L R
Sbjct: 31 IPFIARYRKEVTGSL-------------DDEQLRT---------------------LDTR 56
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQ--LFDSISKSLEAAETEREVDDVDLKFNLH 194
+AL++ ++R ++ R A+ +Q + +++ L+AAET +++D+ L +
Sbjct: 57 LTALRNLEERR---------EKIRAAITEQGKMTEALGAQLDAAETLVQLEDIYLPY--- 104
Query: 195 FPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDP 254
RPKRST+ + + GL E+A + L+
Sbjct: 105 --------------RPKRSTRATVAIERGLSELADLIWAQKTEKSLE------------- 137
Query: 255 KETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
E E S K ++ +QGA + A S +R YVR +
Sbjct: 138 -EEAERFISEEKG--IGTAALCIQGALDILAERFSDARVIRSYVRDTTKRGGQLCAARRE 194
Query: 315 DGDSA---------------IDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQV 359
SA ++++ F +PL K + L + + E+EK+L+V
Sbjct: 195 QKGSAEKQNEAEKEREKRAVYETYYDF-------REPLMKATGYRVLAMNRGEKEKILRV 247
Query: 360 TIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLM 419
I+ P + ++ + + + +A+ + + D+ + P++ ++ R+ +
Sbjct: 248 YIEAPSE---EILATLRGRLIKAENRNTAEAMDRA----ITDSYARLMAPAVERDIRNEL 300
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVML 478
+ A++ + + K L + P A VL W P + ++
Sbjct: 301 TEAAETGAIEVFRKNLHQLLMQPPI------------AGEVVLG--WDPAFRTGCKLAVV 346
Query: 479 DSSGEVVD--VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTS 536
D +G+V+D V++ T +++ ++ E+L +F+ + ++ +G S S
Sbjct: 347 DETGKVLDTAVVYPTMPT-------NEKKQRAAAEKLREFIEKYGVTLISIGNGTASRES 399
Query: 537 LKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA 596
+ + +++++ P+ V S V +E+ +Y S +++++ P + A
Sbjct: 400 -----EQFVAEVLKKLPQKV-------SYVITNEAGASVYSASALATEEFPEFDVGQRSA 447
Query: 597 VALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDI 656
++ R +Q+PLA + + + S + ++ + +E V+ D N VG+D+
Sbjct: 448 ASIARRVQDPLAELVKI-----DPKSIGVGQYQHDMEQKRLGEALEGVVEDCVNAVGVDL 502
Query: 657 NLAIHREWQFAPL-QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVG 715
N A APL ++ISG+ A ++ G RK+ + LG K F G
Sbjct: 503 NTA------SAPLLRYISGITKTTAKNIVSYREENGKFKNRKELLKVSKLGPKAFEQCAG 556
Query: 716 FLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
FLR+ SG + LDDT +HPESY LA+ +
Sbjct: 557 FLRI--SGGE-------NPLDDTGVHPESYALAKAI 583
>gi|374812602|ref|ZP_09716339.1| tex protein [Treponema primitia ZAS-1]
Length = 837
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 142/680 (20%), Positives = 273/680 (40%), Gaps = 150/680 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE+ +L +EV + D+D +
Sbjct: 67 VPFIARYRKEQTGTL------DEVQ---------------------VRDVDHLF------ 93
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
S+ ++ +R E R I+D+ +L + L+++I++++ E E +++ P
Sbjct: 94 -SSGKNLETRRLEI-IRGIFDQGKL--TESLYENITRAVTLTELE----------DIYLP 139
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YKR K++ ++ K GL +A E +Q + E + ++ E+P
Sbjct: 140 ----------YKRKKKTRGMAAIEK-GLEPLADAMLELKEAALVQKAAEFIKEDAENP-- 186
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
+++ LQGA + A + EP R ++S + + + D
Sbjct: 187 ----------ALSVATAEEALQGAMDILAERTAQEPENRAAIKSFYGKDGRIIVKGVGDE 236
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ S +Q W + L + + + L I + E E LL+VTI + E++ +L +
Sbjct: 237 ELKKTSTYQMY---WDYTENLSQIKSHRVLAINRGEREGLLEVTIDVDENTAAELL---Q 290
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
YL + ND + ++D L L P++++E R S A + + + L
Sbjct: 291 RKYL---------INNDYHKTAIEDGLKRLLSPAVIRELRGDQSDTADDHGISVFSQNLK 341
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTL 495
N + P + RVL PG + T LD +G+ + +
Sbjct: 342 NLLMQQPIK------------GTRVLGV--DPGIRTGTKCAFLDDTGK-----YLANFVI 382
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
+ V + + LL + ++ ++ +G + T K+ + EI+ ++ E+ +
Sbjct: 383 YNHKVEEAK------RLLLGGIKNYDVQLIAVG----NGTGSKE-VQEIVTALIAENNLE 431
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL-- 613
V + ++V DE +Y S I+ ++ P ++ A+++GR LQ+PLA + +
Sbjct: 432 VLY-----TVV--DEDGASVYSASDIAREEFPELDLTIRGAISIGRRLQDPLAELVKIDP 484
Query: 614 --CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
G G L L + + T L L++
Sbjct: 485 KSIGVGLYQHDVNQKKLSETLDEVVSSVVNNVGVNLNTASASL--------------LRY 530
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+SG+ A + + G I +R++ + G+G K F GFL++ S +A
Sbjct: 531 VSGINGPLAKKIVKYRDEKGKIASREELTSVPGMGPKSFEQCAGFLKIPESPEA------ 584
Query: 732 IDLLDDTRIHPESYGLAQEL 751
LD+T +HPE+Y +A+ +
Sbjct: 585 ---LDNTWVHPENYAIARAI 601
>gi|229154014|ref|ZP_04282143.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus ATCC 4342]
gi|228629535|gb|EEK86233.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus ATCC 4342]
Length = 722
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 207/499 (41%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+ +
Sbjct: 139 KEDPNQKAMEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMFSAV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YDYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSAQ +L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKKVIRDNDSKSAQYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAIVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVLSIIDKYQVEMIAIGNGTASRES-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
R+V + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVKREVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|381183767|ref|ZP_09892473.1| hypothetical protein KKC_10697 [Listeriaceae bacterium TTU M1-001]
gi|380316348|gb|EIA19761.1| hypothetical protein KKC_10697 [Listeriaceae bacterium TTU M1-001]
Length = 719
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 184/850 (21%), Positives = 348/850 (40%), Gaps = 179/850 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE+ SL D+ E I D+++ + + K
Sbjct: 33 VPFIARYRKEKTGSL--------------DEVE-------------IRDIEETYHYITKL 65
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ +EE R+ DE +L D + K + A + ++ ++D+ F
Sbjct: 66 EA---------RKEEVIRLIDE-----QGKLTDELRKQIMATDKQQSLEDIYRPF----- 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
+ K+ TK + + GL E L +QL D DP +
Sbjct: 107 ------------KQKKRTKATIAKEQGL-----------EPLAIQLL--TFADF--DPVK 139
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
E S K +++ L GA + A ++S RK++R ++++ D
Sbjct: 140 EAETYISTEKN--IQTAEEALLGAHEIIAEQVSDVAEYRKWIRDFTRKFGMITSTKKNDA 197
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ + + + ++ + K ++ + L + E+E +L+V +++ K+ S +
Sbjct: 198 EDEKAVYEMY----YDYQEMIAKMQNHRVLAFNRGEKEGILRVAVQV---DTTKIHSFLE 250
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
E L + + QL R IL DA F+ P++ +E R+ +S A+ + + + L
Sbjct: 251 EKVLPKKENAAVQLV---RAAIL-DAYKRFIGPAIEREIRAELSEVAEDHAIDIFSQNL- 305
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLR 496
K+ + P + + D P C +LD +G+V+++ G +
Sbjct: 306 RKLLLQPPLKGKIVLGVD----PAFRTGC--------KLAVLDPTGKVLEI---GVIYPH 350
Query: 497 SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDV 556
+ R ++K+ Q+ L K+ ++ ++ +G S + + I ++++E +
Sbjct: 351 TAKARRPEAKEKIQDLLKKYGIE----IIAIGNGTAS-----RETEQFIVEVIKESGSNA 401
Query: 557 GHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL--- 613
+ +IV +E+ +Y S I+ ++ P + + AV++GR LQ+PLA + +
Sbjct: 402 FY-----TIV--NEAGASVYSASEIAREEFPTYQVEERSAVSIGRRLQDPLAELVKIDPK 454
Query: 614 -CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL 669
G G+ ++ K+ F V+ NQVG+++N A + L
Sbjct: 455 SVGVGQYQHDVAQKKINETLRF------------VVETAVNQVGVNVNTA-----SASLL 497
Query: 670 QFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSS 729
Q+++GL A ++++ G +R + LG K + ++GF+R+
Sbjct: 498 QYVAGLNKTVAGNIRKYREENGPFASRAELKKVPRLGAKSYEQSIGFMRILEGKNP---- 553
Query: 730 QFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYL 789
LD T IHPESY A+ L ++ R L D LK L
Sbjct: 554 -----LDKTAIHPESYAAAKALIGKMDYR-----LQDIGS-------------QALKESL 590
Query: 790 LDRHIKEKKRENKRETLYL--IRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEG 847
D +IKE E + L L I + LI +D R+ + P ++ + ED L G
Sbjct: 591 QDLNIKETAEELEIGVLTLQDIIQNLIAPGRDLRDALEAPMLKQDVI----KMED-LKAG 645
Query: 848 RVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSI-- 905
+Q TVR V A + G++ S + + +S + GDI+T ++ +
Sbjct: 646 MELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSRTFVKNPMS-VVSVGDIVTVWVEDVDL 704
Query: 906 QKNRYQVFLV 915
+KNR + +V
Sbjct: 705 KKNRIALSMV 714
>gi|406911887|gb|EKD51595.1| hypothetical protein ACD_62C00222G0002 [uncultured bacterium]
Length = 770
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 148/662 (22%), Positives = 271/662 (40%), Gaps = 105/662 (15%)
Query: 271 NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVK 330
++S A+L GA+H+ + +P +R++VR A + T +G F + +
Sbjct: 157 DASLAIL-GAQHIITELAAEDPALRQFVRDSLWKKAAIKTGKG-EGAKEHSKFEPYFEFQ 214
Query: 331 WLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQ- 389
++ ++L +++ EK L++T +D+ N +E L +K +
Sbjct: 215 AALSSLIKPENSHRYLALRRGWVEKELELTFADIDDAQN-----VEESLLVAYQTKQCRH 269
Query: 390 -LWNDQRELI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ 445
L +D +++ K AL +LPS+ E + A + + + + + P+
Sbjct: 270 PLDDDITKIVHGACKLALRAHVLPSIHTEIHKELKDSADAAAIEVFSNNVKQLLLSAPFG 329
Query: 446 RKDN-DITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVV--DVLFTGCLTLRSQNVRD 502
K I P + +V V++++ G V+ DV + +
Sbjct: 330 AKTVLGIDPGQRTGCKV--------------VVMNAEGSVLCHDVFY----------LLQ 365
Query: 503 QQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDE 562
K +LL+ + H V +G N + ++ +IIFK +
Sbjct: 366 DNDKAKSAHKLLELVKKHGVQAVAIG--NGTAGRETEEFVKIIFKA----------QKIT 413
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILS 622
L +V ES +Y S ++ ++ P V+ A+++ R LQ+PL+ + + + S
Sbjct: 414 LPVVMVSESGASVYSASDVAREEFPDLDVTVRGAISIARRLQDPLSELVKV-----DPKS 468
Query: 623 WKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAAS 682
+ ++ ++ + ++ V+ N VG+++N A + L +SG+GP A +
Sbjct: 469 IGVGQYQHDVSQTQLKKKLDFVVDSCVNTVGVNVNTA-----SYHLLAHVSGIGPVLAKT 523
Query: 683 LQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
L G +RK + A KKVF A GFLR+ +S LD+T +HP
Sbjct: 524 LVAYRQEHGLFTSRKSLLKAPRFSKKVFEQAAGFLRIPQSKNP---------LDNTGVHP 574
Query: 743 ESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENK 802
E Y L + +K + N+ ++ L D LE + +E K++
Sbjct: 575 EKYSLLETFSKSL-NKTMKDFLFDGVKCLESS--------------------EEFKQQVG 613
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
T I EL +D R Y+ S E+ + +S L+EG V V V A
Sbjct: 614 LFTFNDIIEELKKPGRDPREVYEVFSFREDIHELSD-----LSEGLVCPGIVTNVTNFGA 668
Query: 863 ---ICVLESGLAGM-LMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
I V + GL + M E + D +D + GD + K+ SI +++ Q+ L R
Sbjct: 669 FVDIGVHQDGLVHISQMSEAFVKDPKDV-----VSPGDKVAVKVISINQDKRQIGLSLRL 723
Query: 919 SE 920
SE
Sbjct: 724 SE 725
>gi|195502650|ref|XP_002098317.1| GE24021 [Drosophila yakuba]
gi|194184418|gb|EDW98029.1| GE24021 [Drosophila yakuba]
Length = 992
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 185/428 (43%), Gaps = 61/428 (14%)
Query: 344 QWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
Q L I + E+ K L V ++ + L + Y+++G+ + +RE+ K
Sbjct: 424 QMLAINRGEKHKFLTVKLETNDYLKRDLMRFITDQYMNEGLQ-----YPLRREVFTKSLE 478
Query: 404 DNF---LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPR 460
+ + L P M ++ R+ + +A+ + + K L + + P + R
Sbjct: 479 ECYAKKLQPLMCRQIRADLKEKAQKAAIDTFAKNLKQLLLMSPLK------------GER 526
Query: 461 VLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDH 520
+L PG T L E DVL TG + + +K+ +++L++ + DH
Sbjct: 527 ILGV--DPGY--TNGCKLAVISETADVLDTGVIYPHGA----RSNKRAAEQKLVQLLSDH 578
Query: 521 QPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHE--MDELSIVYG--DESLPRLY 576
++ LG +C + E D+ H +D SI Y +E+ +Y
Sbjct: 579 NCRIIALGN-GTAC------------RETEHWLTDMFHAGVLDGGSIRYSIVNENGASVY 625
Query: 577 ENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDE 636
S +++ + P N + AV++ R L +PL+ + + ++ E LT
Sbjct: 626 SCSDVAAKEFPEMDTNERSAVSIARRLNDPLSEYVKIEPRHLGVGMYQHDVSEKVLTES- 684
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTR 696
++ V+ + + VG+D+N A + L+ I+GL +KA + + G TR
Sbjct: 685 ----LKDVVSECVSYVGVDLNTA-----SLSVLKHIAGLSEKKAEKIIEYRTQKGPFKTR 735
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELA---K 753
KD ++ +G+K FV GF+R+ + + + LD T +HPESY + + LA
Sbjct: 736 KDLLSVRTIGEKSFVQCAGFVRIE---PLSVGGRLQNPLDCTWVHPESYKVVESLAFSSA 792
Query: 754 EVYNRDIE 761
+ N+++E
Sbjct: 793 ALTNKEVE 800
>gi|423405043|ref|ZP_17382216.1| hypothetical protein ICW_05441 [Bacillus cereus BAG2X1-2]
gi|423479880|ref|ZP_17456594.1| hypothetical protein IEO_05337 [Bacillus cereus BAG6X1-1]
gi|401645686|gb|EJS63336.1| hypothetical protein ICW_05441 [Bacillus cereus BAG2X1-2]
gi|402424272|gb|EJV56458.1| hypothetical protein IEO_05337 [Bacillus cereus BAG6X1-1]
Length = 722
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 205/500 (41%), Gaps = 78/500 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAVEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSSV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YSYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSA +L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKRVIRDNDSKSAHYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAVVDDTGKVLYIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + +Q ++ +G S S E
Sbjct: 355 ------HPPVRKYEDAKT---KVLSIIDKYQVEMIAIGNGTASRES-------------E 392
Query: 551 EHPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
E DV + E+ + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA
Sbjct: 393 EFIVDVLQNVKQEVFYIIVNEAGASVYSASDLAREEFPNLQVEERSAVSIGRRLQDPLAE 452
Query: 610 VATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ + G G+ L LT V+ NQVG+++N A
Sbjct: 453 LVKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----S 498
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 499 VALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANP 558
Query: 726 ASSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 ---------LDRTGIHPEQY 569
>gi|229171090|ref|ZP_04298688.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus MM3]
gi|423462490|ref|ZP_17439284.1| hypothetical protein IEI_05627 [Bacillus cereus BAG5X2-1]
gi|228612420|gb|EEK69644.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus cereus MM3]
gi|401131784|gb|EJQ39434.1| hypothetical protein IEI_05627 [Bacillus cereus BAG5X2-1]
Length = 722
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 113/501 (22%), Positives = 205/501 (40%), Gaps = 80/501 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P + A F A S++ LQGA+ + A +S E R ++R++ V+S+
Sbjct: 139 KEDPNQKAVEFINAEKEVQSAEEALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSSV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + + E+PL+K + L + + E+E +L+V++ P D ++
Sbjct: 199 KDEEKDEKNIYEMY----YSYEEPLQKVVPHRVLAMNRGEKEDILRVSVVPPVD---EIV 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + + D SKSA +L ++D + S+ +E R ++ A+ + +
Sbjct: 252 TFLYKRVIRDNDSKSAHYV----KLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEV--VDVLF 489
+ L N + P + K + P + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK--------------VVLALDPAYRTGCKLAVVDDTGKVLYIDVIY 353
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
VR + K ++L + +Q ++ +G S S
Sbjct: 354 P------HPPVRKYEDAKT---KVLSIIDKYQVEMIAIGNGTASRES------------- 391
Query: 550 EEHPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
EE DV + E+ + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA
Sbjct: 392 EEFIVDVLQNVKQEVFYIIVNEAGASVYSASDLAREEFPNLQVEERSAVSIGRRLQDPLA 451
Query: 609 MVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+ + G G+ L LT V+ NQVG+++N A
Sbjct: 452 ELVKIDPKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA----- 497
Query: 665 QFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
A LQ++SGL A ++ G R D LG K + +GFLR+
Sbjct: 498 SVALLQYVSGLSKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGAN 557
Query: 725 AASSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 558 P---------LDRTGIHPEQY 569
>gi|347548303|ref|YP_004854631.1| hypothetical protein LIV_0840 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346981374|emb|CBW85325.1| Conserved hypothetical protein [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 725
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 181/856 (21%), Positives = 350/856 (40%), Gaps = 188/856 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ E I D+++ + + K
Sbjct: 36 VPFIARYRKEMTGSL--------------DEVE-------------IRDIEETFEYVTKL 68
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ +EE R+ DE +L D + ++ AE + ++D L+ P
Sbjct: 69 ENR---------KEEIIRLIDE-----QGKLTDELKNAIIKAEKHQALED------LYRP 108
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS---KFGYSSEQLGLQLSLEKMGDELED 253
YK+ KR TK + + GL +A+ F ++E LE+ + + +
Sbjct: 109 ----------YKQKKR-TKATIAKEKGLEPLANWLMSFPNNAE------PLEEAANYISE 151
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--- 310
KE S++ L GA + A +IS EP R+++R+ +V +
Sbjct: 152 EKEV-------------ESAELALLGAHEIIAEQISDEPAFREWIRNFTRKFGMVESRGK 198
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
D + +++F + + K + L + E+E +L+V +++ K
Sbjct: 199 NIEADEKGVYEMYYEF-------NEMIGKVASHRVLAFNRGEKEDILRVQVQV---DTTK 248
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
+F+ E + + S + E IL DA F+ P++ +E R ++ +A+ +
Sbjct: 249 IFAYLFEKVIQNRNSNTRPYV---EEAIL-DAYKRFIGPAIEREIRGELTEKAEEQAIHI 304
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFT 490
+ + L K+ + P + + D P C F +LD +G+V+++
Sbjct: 305 FSENL-RKLLLQPPLKGKIILGVD----PAFRTGC--------KFSVLDKTGKVLEI--- 348
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
G + + R ++K +++ + + +Q V+ +G S + + I +++
Sbjct: 349 GVVYPHTAKARRPEAK----QKIAEILSTYQVEVIAIGNGTAS-----RETEQFIVEVIR 399
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E + + IV +E+ +Y S + ++ P + + AV++GR LQ+PLA +
Sbjct: 400 ESNSNAYY-----CIV--NEAGASVYSASETAREEFPDYQVEERSAVSIGRRLQDPLAEL 452
Query: 611 ATL----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
+ G G+ ++ +L F V+ NQVG+++N A
Sbjct: 453 VKIDPKSVGVGQYQHDVAQKRLNETLTF------------VVETAVNQVGVNVNTA---- 496
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+ LQ+++GL A ++++ G+ +RK+ LG K + ++GFLR+
Sbjct: 497 -SASLLQYVAGLNKTVANNIRKFREENGSFTSRKELKKVPRLGAKSYEQSIGFLRILEGE 555
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEV--YNRDIEGDLNDDEDALEMAIEHVRDR 781
LD T IHPESY A+++ K +DI G N E ++I
Sbjct: 556 NP---------LDRTAIHPESYKAAEQIVKAAGFELKDI-GSTNLKEALQALSI------ 599
Query: 782 PDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE 841
P+ + +K +ET+ I LI +D R++ P ++ +
Sbjct: 600 PE-----------EAEKLAIGKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISM----- 643
Query: 842 DTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCK 901
D L +G +Q TVR V A + G++ S+ + + + D + GD++T
Sbjct: 644 DDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNSFVKNPM-DIVSVGDVVTVW 702
Query: 902 IKSIQKNRYQVFLVCR 917
+ + + ++ L R
Sbjct: 703 VDEVDTKKNRIALTMR 718
>gi|194746339|ref|XP_001955638.1| GF16142 [Drosophila ananassae]
gi|190628675|gb|EDV44199.1| GF16142 [Drosophila ananassae]
Length = 900
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 182/421 (43%), Gaps = 50/421 (11%)
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
++ + Q L I + E+ K L V ++ + L + Y+++G+ + +RE
Sbjct: 370 IKTIKPHQMLAINRGEKHKFLSVKLETNDYLKRDLMRFINDQYMTEGLH-----YPLRRE 424
Query: 397 LILKDALDNF---LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
+ K + + L P M ++ R+ + +A+ + + K L + + P +
Sbjct: 425 VFTKSVEECYSKKLQPLMCRQIRADLKEKAQKAAIDVFAKNLKQLLLMSPLK-------- 476
Query: 454 DEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERL 513
R+L+ PG T L E DVL TG + Q R +K ++ L
Sbjct: 477 ----GERILSI--DPGY--TNGCKLAVISETADVLETG--VIYPQGAR--SNKHGAEKTL 524
Query: 514 LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLP 573
+ + H ++ LG +C + + ++ H + + SIV +E+
Sbjct: 525 VNLLNKHNCQIIALGN-GTACRETEHWLTDMF------HAGTLDSQRIRYSIV--NENGA 575
Query: 574 RLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLT 633
+Y S ++S + P N + AV++ R L +PL+ + + ++ E LT
Sbjct: 576 SVYSCSDVASKEFPDMDTNERSAVSIARRLNDPLSEYVKIEPRHLGVGMYQHDVSEKILT 635
Query: 634 PDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAI 693
++ V+ + + VG+D+N A + L+ I+GL +KA + ++ G
Sbjct: 636 ES-----LKDVVSECVSYVGVDLNTA-----SLSVLKHIAGLSEKKAEKIIEHRLKKGPF 685
Query: 694 FTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK 753
TRKD ++ +G+K FV GF+R+ + + + LD T +HPESY +A+ +
Sbjct: 686 QTRKDLLSVRTIGEKSFVQCAGFVRIE---PLSVGGKLQNPLDCTWVHPESYKVAESILS 742
Query: 754 E 754
E
Sbjct: 743 E 743
>gi|254443813|ref|ZP_05057289.1| S1 RNA binding domain protein [Verrucomicrobiae bacterium DG1235]
gi|198258121|gb|EDY82429.1| S1 RNA binding domain protein [Verrucomicrobiae bacterium DG1235]
Length = 779
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 158/715 (22%), Positives = 270/715 (37%), Gaps = 156/715 (21%)
Query: 50 PKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFE 109
PK +LSI + LL ++ +PFIA YRKE L +EV N D
Sbjct: 7 PKIAEELSIPESHVTATAKLL-VEGGTVPFIARYRKEATGGL------DEVQIANIRD-- 57
Query: 110 RTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFD 169
LD+ L +R + ++S ++ L D
Sbjct: 58 ---------------RLDQLKALEDRRAAIIKSLVDQKL------------------LTD 84
Query: 170 SISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS 229
+ +EAAET ++DV L + +PKR TK + + GL +A
Sbjct: 85 ELKAKVEAAETMARLEDVYLPY-----------------KPKRRTKATIAREKGLEPLA- 126
Query: 230 KFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAM--FNSSQAVLQGARHMAAVE 287
EK+ ED P A+ F A S A L GAR + A
Sbjct: 127 ---------------EKLFQNQEDASIDPATAAAAFVDAEKEVADSDAALAGARDIIAEW 171
Query: 288 ISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLL 347
I+ + R +R ++ ++ +++ + F + W +P+ + L
Sbjct: 172 INDDADARAELRELYTKHSTLTSRVMMGKEEEGAKFRDY--FDW--SEPIANAPSHRILA 227
Query: 348 IQKAEEEKLLQVTIKLPED-SLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF 406
I++ E E +L ++++ ED ++ KL E G S +A+ Q L +DA
Sbjct: 228 IRRGESEMVLSMSVRPDEDLAVAKL-----EARFVKGQSPAAE----QVRLATRDAFKRL 278
Query: 407 LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCW 466
L SM AR + RA + + + +
Sbjct: 279 LSISMETAARLEIKKRADAEAINVFTSNIRE--------------------------LLL 312
Query: 467 GPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHV-- 524
P E T + +D TGC T+ V D Q K + Q V
Sbjct: 313 APALGERTVIAIDPG------FRTGCKTV----VLDAQGKLLFDTVIYPSQSQRQIDVAK 362
Query: 525 -VVLGAV---NLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSR 580
+V G N+ ++ + + E R +G +++IV +ES +Y S
Sbjct: 363 TIVSGLAQRFNVEAIAIGNGTAG---RETETFVRSLGLP-KQIAIVMVNESGASIYSASD 418
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
++ ++ P + V+ AV++GR L +PLA + + + S + ++ +
Sbjct: 419 VAREEFPDKDITVRGAVSIGRRLMDPLAELVKI-----DPKSIGVGQYQHDVDQRALKAS 473
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFV 700
++ ++ N VG+++N A + L ++SGL R A ++ G +RK
Sbjct: 474 LDDSVLSCVNAVGVEVNTASKQ-----LLSYVSGLNSRLAGAIVAHREANGPFKSRKQIT 528
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
G+G K F A GFLR+R + LD + +HPE Y L +++AK++
Sbjct: 529 KVAGIGPKAFEQAAGFLRIRGAENP---------LDASAVHPERYPLLEQMAKDL 574
>gi|429759271|ref|ZP_19291774.1| Tex-like protein [Veillonella atypica KON]
gi|429180136|gb|EKY21364.1| Tex-like protein [Veillonella atypica KON]
Length = 725
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/517 (21%), Positives = 217/517 (41%), Gaps = 70/517 (13%)
Query: 244 LEKMGDELEDPKET---PEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
LE + D + + T P ++A + + + +QGA + A +S R +R
Sbjct: 121 LEPLADMILNDTVTSGNPLDIAREYISEDVPTPEDAIQGASDIVAEIVSDSADFRATLRK 180
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVT 360
+ D + D F Q+ +P+R+ + L + + E+ L++
Sbjct: 181 RMWKEGFIQAELVEDNEHK-DQFLQYNEYA----EPVRQMPSHRILAVNRGEKLGALKLA 235
Query: 361 IKLPEDSLNKLFSDCKEHYLSDGVSKSAQ-LWNDQRELILKDALDNFLLPSMVKEARSLM 419
+ +P++S + Y+ G++ + Q ++ D + + DA + P++ ++ R+ +
Sbjct: 236 LTVPDESYIQ--------YIVRGITNNEQSIFIDVKASAVADAYKRLMFPALERDIRNEL 287
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVML 478
+ A + +G L N + P A V+ PG + ++
Sbjct: 288 TESADEQAIKVFGVNLKNLLLQPPL-------------AGHVI-MGLDPGYRTGCKMAII 333
Query: 479 DSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
D+ G V+D G L + Q+++K E++ KF +V +L N + +
Sbjct: 334 DAQGNVLDY---GAYYLTNSEKLKQEAQKKLAEKIRKF------NVTLLSIGNGTASY-- 382
Query: 539 DDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVA 598
+ + KM+EE D + + +E+ +Y S+++ D+LP ++ AV+
Sbjct: 383 -ETEQFASKMIEEEKLDCHY-------IITNEAGASVYSASKLAIDELPNLDVTIRGAVS 434
Query: 599 LGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINL 658
+ R +Q+PLA + + S + ++ + + ++QV+ V N VG+++N
Sbjct: 435 IARRVQDPLAESVKI-----DPKSIGVGQYQHDVNQKQLTHTLDQVVESVVNHVGVELNT 489
Query: 659 AIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLR 718
A A LQ I+G+ A ++ G +RK + LG F GFLR
Sbjct: 490 A-----SPAILQHIAGISGTVAKNIVAFRQENGGFTSRKQLLKVPRLGPAAFTQCAGFLR 544
Query: 719 VRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
+ + LD+T +HPESY LA+ + E+
Sbjct: 545 LNGAKNP---------LDNTSVHPESYELAERIIGEL 572
>gi|402830616|ref|ZP_10879313.1| Tex-like protein N-terminal domain protein [Capnocytophaga sp.
CM59]
gi|402283965|gb|EJU32470.1| Tex-like protein N-terminal domain protein [Capnocytophaga sp.
CM59]
Length = 707
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/555 (21%), Positives = 232/555 (41%), Gaps = 95/555 (17%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
YK+ KR TK + GL E L QL +++ D E++A+ +
Sbjct: 104 YKK-KRKTKADVAKENGL-----------EPLAKQLMSQRVAD--------LEQLAARYL 143
Query: 267 CAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA--VVSTCPTPDGDSAIDSFH 324
S+Q LQGA + A I+ VR+ +R +F A + + +
Sbjct: 144 SDKVTSAQEALQGASDIIAEWINENMYVRRTLRRVFQRKAQLCAEVAKGKENEEEAQKYA 203
Query: 325 QFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL-PEDSLNKLFSDCKEHYLSDG 383
Q+ W +PL K + L + +AE+E +++ +++ PED++ ++ +
Sbjct: 204 QY--FDW--SEPLAKAPSHRVLAVLRAEKEGFIKMKVEVEPEDTI---------PFIEET 250
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
V K + D + +KD+ L PS+ E +A + + + + L + P
Sbjct: 251 VIKGSGEVADFLKKTVKDSYKRLLEPSISNETLQEAKDKADTKAISVFSENLSQLLLASP 310
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCLTLRSQNV 500
K R+LA PG + V LD G+++ + +F Q+
Sbjct: 311 LGEK------------RILAI--DPGFRTGCKVVCLDEKGDLLHNETIFPHA----PQHE 352
Query: 501 RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
SKK ++ M++ + A+++ + + I ++ HP
Sbjct: 353 TALASKK------IRTMVEQYR----IEAISIGNGTASRETESFIKQIAFPHP------- 395
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
+ + E+ +Y S+++ D+ P V+ AV++GR L +PLA + + E
Sbjct: 396 --VQVFVVSEAGASVYSASKVARDEFPDYDVTVRGAVSIGRRLADPLAELVKI-----EP 448
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
S + ++ + ++ ++ N+VG+++N A + L ++SG+G + A
Sbjct: 449 KSIGVGQYQHDVNQASLKQELDATVIRCVNKVGVNLNTASK-----SLLSYVSGIGEKMA 503
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ GA R+D LG KV+ AV FLRV S LD++ +
Sbjct: 504 ENIVAYRSANGAFARREDLKKVPRLGDKVYQQAVAFLRVHNSENP---------LDNSAV 554
Query: 741 HPESYGLAQELAKEV 755
HPE+Y + +++AK++
Sbjct: 555 HPEAYPIIKQMAKDL 569
>gi|228989421|ref|ZP_04149410.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus pseudomycoides DSM 12442]
gi|228770368|gb|EEM18943.1| Tex protein-related transcription accessory protein (S1 RNA binding
domain) [Bacillus pseudomycoides DSM 12442]
Length = 722
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/507 (21%), Positives = 211/507 (41%), Gaps = 76/507 (14%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P A F A S+Q LQGA+ + A IS R ++R++ ++++
Sbjct: 139 KEDPTGKAKEFVNAEKEVQSAQEALQGAQDIIAELISDNAAYRSWIRNVTFKKGMIASSV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + + G E+PL+K + L + + E+E++L+ ++ P + + +
Sbjct: 199 KDEEKDEKNIYEMYYGY----EEPLQKIVPHRVLAMNRGEKEEVLKASVVPPIEEIVRFL 254
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
H +S +SA D +L ++D + PS+ +E R ++ +A+ + +
Sbjct: 255 HKKVIHDVS---FESA----DYVQLAIEDGYKRLIQPSIEREIRKELTEKAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAVVDDTGKVLHIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K +++ + +Q ++ +G S + E I +++
Sbjct: 355 ------HPPVRKYEDAKA---KVVSILEKYQVQMIAIGNGTASRET-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
P+DV + + +E+ +Y S ++ ++ P + + A+++GR LQ+PLA +
Sbjct: 401 VVPQDVFY-------IIVNEAGASVYSASDLAREEFPDLQVEERSAISIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ NQVG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNQVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ + G R + LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVKKREEDGKFTKRTELKGIPRLGAKTYEQCIGFLRILEGKNP- 558
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAK 753
LD T IHPE Y + L K
Sbjct: 559 --------LDRTSIHPEQYKNVELLLK 577
>gi|386757080|ref|YP_006230296.1| S1 RNA binding domain-containing protein [Bacillus sp. JS]
gi|384930362|gb|AFI27040.1| S1 RNA binding domain protein [Bacillus sp. JS]
Length = 719
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 184/847 (21%), Positives = 336/847 (39%), Gaps = 171/847 (20%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE+ S+ +EV I + ++W +Q
Sbjct: 35 VPFIARYRKEQTGSM------DEVQ---------------------IQTISERWQYIQN- 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+R EE R I ++ +L D + + +E + +EV+D L+ P
Sbjct: 67 -------LNQRKEEVIRLIAEQDKLT------DDLKRKIEQSVKLQEVED------LYRP 107
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + GL +A L+L + D L +
Sbjct: 108 ----------YKQ-KRKTKATVAKSKGLEPLADYI----------LTLPQ-DDRL---AK 142
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
T E+ S K +F +A+ +GA+H+ A +IS EP RK++R + + G
Sbjct: 143 TAEQYISEEK-EVFTREEAI-EGAKHIIAEQISDEPSFRKWIRQETFKKGTIKSVA---G 197
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
SA + + E+P+ K + L + + E+E +L+V+I+ P D +
Sbjct: 198 KSADTDEKNVYEMYYEYEEPIAKVVPHRVLAMNRGEKEDILKVSIEPPADHIK------- 250
Query: 377 EHYLSDGVSK--SAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
YL + K S + +E I +D+ + P++ +E R +S +A + + +
Sbjct: 251 -AYLEKQIIKNRSTSVKEILQETI-EDSYKRLIQPAIEREIRKELSEKADEQAIHIFSEN 308
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFTGC 492
L K+ + P + + D P C + D +G+V +DV++
Sbjct: 309 L-RKLLLQPPMKGKTVLGVD----PAFRTGC--------KLAVSDETGKVLKIDVIYPHA 355
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
++ K E++ K + +Q +V +G S + + I ++++
Sbjct: 356 PVNKT---------KEAHEKVKKILEQYQVEMVAIGNGTAS-----RETEQFIVNVLKDM 401
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
PR + + V +E+ +Y S ++ ++ P K + AV++ R LQ+PLA +
Sbjct: 402 PRKIYY-------VIVNEAGASVYSASELAREEFPDLKVEERSAVSIARRLQDPLAELVK 454
Query: 613 LCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFI 672
+ + ++ + L ++ + + ++ A LQ++
Sbjct: 455 IDPKSVGVGQYQHDVSQKRLNESLRFVV----------ETVVNQVGVNVNTASAALLQYV 504
Query: 673 SGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFI 732
+GL A ++ + G RK+ LG K + +GFLRV+ +
Sbjct: 505 AGLSKSVAGNVVKKREEIGKFSNRKELKDIPRLGAKTYEQCIGFLRVQEGTEP------- 557
Query: 733 DLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDR 792
LD T IHPESY +EL K+ L ++ EH+ LK +
Sbjct: 558 --LDRTGIHPESYKETKELLKK----------------LGLSTEHIGTAE--LKDKINQL 597
Query: 793 HIKEKKRE--NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVV 850
+ E +E TL IR +L +D R++ +P + + + L EG +
Sbjct: 598 ALSETAKELGIGEITLKDIREQLTRPERDPRDEVPKPLLKTDVLQL-----EDLKEGMEL 652
Query: 851 QATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIK--SIQKN 908
Q TVR V A + G++ S+ + L D + GDI+T + +QK
Sbjct: 653 QGTVRNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHPL-DVVSVGDIVTVWVDGVDVQKG 711
Query: 909 RYQVFLV 915
R + +V
Sbjct: 712 RVSLSMV 718
>gi|116626034|ref|YP_828190.1| RNA-binding S1 domain-containing protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116229196|gb|ABJ87905.1| RNA binding S1 domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 749
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 148/656 (22%), Positives = 252/656 (38%), Gaps = 125/656 (19%)
Query: 209 RPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETP-EEMASNFKC 267
+PKR TK S GL E L L L E DP TP ++A+ F
Sbjct: 113 KPKRRTKASIARDKGL-----------EPLALFLW------EQSDP--TPLSQVAARFGM 153
Query: 268 AMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST-----CPTPDGDSAIDS 322
++ L+GARH+ A +S + RK VR++ M VS+ P P+G +
Sbjct: 154 ----PAEEALEGARHIVAEMVSEKAEFRKAVRAMMMTEGRVSSRAIEGVPDPEGKYKM-- 207
Query: 323 FHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSD 382
+ +A +P K + L I++ +E +L I+L + +L
Sbjct: 208 YVSYA-------EPASKIPSHRMLAIRRGAKEGILTFEIELEKPQ--------PLAWLRS 252
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
V K+ W E ++D+ D L PS+ E R + R+ + + + L N +
Sbjct: 253 HVVKAPGPWVPHLEEAIEDSYDRLLKPSIQTEVRLELKDRSDEEAIKVFRENLENLLLSP 312
Query: 443 PYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVR 501
P A R+ PG + ++D +G+ ++ +V
Sbjct: 313 P--------------AGRMTVLALDPGIRTGCKIAVVDDTGKFLE-----------NSVI 347
Query: 502 DQQSKKND----QERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVG 557
KND ++ L + + + +G S S V+E R
Sbjct: 348 YPFEPKNDTAGSRKTLASLIARYNVQAIAIGNGTASRESAA---------FVQEFLRSAN 398
Query: 558 HEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPG 617
+ + V ES +Y S ++ + P ++ A+++ R LQ+PLA + +
Sbjct: 399 --LASIFSVTVSESGASVYSASEMARQEFPELDLTIRGAISIARRLQDPLAELVKV---- 452
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ S + ++ + +E + N+VG+D+N A W L++++G+
Sbjct: 453 -DPKSIGVGQYQHDVDQRRLKASLEATVESCVNRVGVDLNTA---SWAL--LRYVAGITE 506
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
R A + G +R D + G G K F A GFLR+R LD
Sbjct: 507 RTAIKITEYRNDHGRFRSRMDLMAVPGFGPKTFEQAAGFLRIRGGDNP---------LDI 557
Query: 738 TRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEK 797
T +HPESY + Q++A+ +L I+ + +P+L++ L+
Sbjct: 558 TAVHPESYPVVQKIAQ----------------SLGTTIDDLIRKPELIEKVKLEGF---A 598
Query: 798 KRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQAT 853
TL IR EL +D R+Q+ P E+ I+ EG V T
Sbjct: 599 TASVGMYTLGDIREELRKPGRDPRDQFVAPKWREDVREIADLQPGMTLEGVVTNVT 654
>gi|428306321|ref|YP_007143146.1| Tex-like protein [Crinalium epipsammum PCC 9333]
gi|428247856|gb|AFZ13636.1| Tex-like protein [Crinalium epipsammum PCC 9333]
Length = 716
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 212/492 (43%), Gaps = 78/492 (15%)
Query: 272 SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV-VSTCPT--PDGDSAIDSFHQFAG 328
+++ L+GA + A ++ + +R Y+R M++ V VST P+G + + + ++
Sbjct: 157 NAEEALKGASDILAESVAEKADLRAYLRDFLMNSGVFVSTIKDDYPEGTTKFEMYRKYTA 216
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHY-LSDGVSKS 387
++ L + + E E +L+V + E + +D E+ + V +
Sbjct: 217 -------RVKDIPPHNMLALFRGETEGILKVELDFDES----VVTDYLEYQEIKTKVPEV 265
Query: 388 AQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
Q + + +LKDA + + S++ E R+ K++ +E K N + +
Sbjct: 266 RQFYRE----MLKDAFNRLMKTSLISEVRA----EKKNFADIESIKTFENNL-------R 310
Query: 448 DNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKK 507
+ ++P P PG +G V VL L Q V QS+K
Sbjct: 311 ELLLSPPAGMQP---TLAIDPGF---------RTGCKVAVLSETAQFLEYQAVFPHQSQK 358
Query: 508 NDQE---RLLKFMMDHQPHVVVLGAVNLSCTSLKDD-IYEIIFKMVEEHPRDVGHEMDEL 563
+E + K + + ++ +G N + D+ + E++ KM + +
Sbjct: 359 QREEAANTIKKLVEKYHIQLIAIG--NGTAGRETDEFVSEVLAKMSRQPIK--------- 407
Query: 564 SIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSW 623
V +ES +Y S ++ + P V+ A+++GR LQ+PLA + + + +
Sbjct: 408 --VMVNESGASIYSASEVAGKEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQY 465
Query: 624 KLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASL 683
+ + L + +++ + N VG+D+N A +E L F+SG+ P A ++
Sbjct: 466 QHDVDQKLLKKN-----LDETVESCVNYVGVDLNTA-SKEL----LTFVSGITPTVAQNI 515
Query: 684 QRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPE 743
GA R+ LG K F A GFLR+ R G+ + LD+T +HPE
Sbjct: 516 VTYRNENGAFKNRRQLKKVAKLGLKAFEQAAGFLRI-RDGE--------NPLDNTAVHPE 566
Query: 744 SYGLAQELAKEV 755
SYG+ + +A+++
Sbjct: 567 SYGVVEAIAQDL 578
>gi|294054698|ref|YP_003548356.1| Tex-like protein [Coraliomargarita akajimensis DSM 45221]
gi|293614031|gb|ADE54186.1| Tex-like protein protein [Coraliomargarita akajimensis DSM 45221]
Length = 758
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 131/620 (21%), Positives = 249/620 (40%), Gaps = 104/620 (16%)
Query: 138 SALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPP 197
+A++ Y++ + + RR L Q L + + L A+T +++D+ L F
Sbjct: 53 TAIRDRYQQLKDVQFRRESILKSLDERQLLTEELKGKLNTADTLSKLEDIYLPF------ 106
Query: 198 GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKET 257
RPKR TK + + GL +A Y + E+ ++ KE
Sbjct: 107 -----------RPKRRTKATIAREKGLEPLAQ---YLFDNQNASDCAEQAAPYVDADKEV 152
Query: 258 PEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGD 317
+ A ++GARH+ A IS + R +R++F +S+ +
Sbjct: 153 -------------DDINAAIEGARHIIAEWISDDADARDALRTLFWKQGTLSSEVMMGKE 199
Query: 318 SAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKE 377
F + W ++P+ K + L I++ E+E L I LPE + ++
Sbjct: 200 DEAAKFRDY--FDW--KEPIAKAPSHRVLAIRRGEKEGFLFHRI-LPEQE--SAIAILEK 252
Query: 378 HYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWN 437
+L+ S +A++ ++D+ L SM EAR A + + +
Sbjct: 253 QFLNGHGSAAAEVKK-----AIEDSYKRLLSHSMEGEARLRAKKEADGGAIQVFSDNVRE 307
Query: 438 KVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCLT 494
+ P +K R++A PG + V+LD+ G ++ +LF C
Sbjct: 308 LLLASPLGQK------------RIMAV--DPGFRTGCKTVILDAQGNLIFNHILF--CTG 351
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
++Q R + K E+ H V +G S + E R
Sbjct: 352 SQAQVNRAKMEAKALAEQ-------HSIEAVAIGNGTAS-------------RETESFFR 391
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLC 614
++G ++ I+ +ES +Y S ++ ++ P + V+ AV++GR L +PLA + +
Sbjct: 392 ELGLP-KQIPIIVVNESGASIYSASEVAREEFPNEDITVRGAVSIGRRLMDPLAELVKID 450
Query: 615 GPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISG 674
+ ++ +N L ++ ++ N VG+++N A + L ++SG
Sbjct: 451 PKSIGVGQYQHDVDQNALKHK-----LDDTVISCVNNVGVEVNTASKQ-----LLAYVSG 500
Query: 675 LGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDL 734
L A ++ + G +R++ LG K + GFLR+R +
Sbjct: 501 LNESIAGNIVTYRIENGPFKSREELNKVTRLGPKAYEQCAGFLRIRGAANP--------- 551
Query: 735 LDDTRIHPESYGLAQELAKE 754
LD++ +HPE Y L +++A +
Sbjct: 552 LDESAVHPERYALVEQMAAD 571
>gi|227513748|ref|ZP_03943797.1| S1 domain RNA-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227083067|gb|EEI18379.1| S1 domain RNA-binding protein [Lactobacillus buchneri ATCC 11577]
Length = 722
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 186/857 (21%), Positives = 333/857 (38%), Gaps = 194/857 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE +L++ E+ R H+ I LDK+
Sbjct: 34 VPFIARYRKERT----SNLDEVEI---------RDIQASAHR----IQTLDKR------- 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++E +I +E + AL +L K +E A ++V+D L+ P
Sbjct: 70 ------------KDEVIKIIEEQK-ALTPKL----KKQIETATVLQQVED------LYLP 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + + GL +A +L ++S + DP +
Sbjct: 107 ----------YKQ-KRRTKATIAKEKGLLPLAKAATSFDNELDNKIS------QAIDPDK 149
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST-----C 311
+ + V+ G + A E+ RK++R V++T
Sbjct: 150 D------------LSDRETVISGIHEIIAEEVGDSANFRKWIRQNTNRYGVMTTKVKRGA 197
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
D ++ F + +R+ + L I + E+E +L V I + E +N
Sbjct: 198 KEKDETGTYQQYYDFT-------QSVREIPSYRTLAINRGEKEGILNVKITVNETPINWY 250
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDA-LD---NFLLPSMVKEARSLMSGRAKSWL 427
+ S+ + K + L D I+KDA LD F+ P++ +E R +S +A
Sbjct: 251 LT-------SNMIGKHSGLAAD----IVKDATLDGYQRFIGPAIEREIRKELSEKAAEHA 299
Query: 428 LMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVD 486
+ +GK L+N + P + + + + P + ++DS+G+ +D
Sbjct: 300 IDIFGKNLYNLLMQAPLKGR--------------VVMGFDPAYRTGCKLAVVDSNGKYLD 345
Query: 487 VLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIF 546
+ + +K + + F+ + ++ +G S S
Sbjct: 346 -----KTVIYPHKPASEAKRKAAEGLFIDFINKNHVEMIAIGNGTASRES---------- 390
Query: 547 KMVEEHPRDVGHEMDE-LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
E+ + ++D + V +E+ +Y SR++ ++ P + AV++ R +Q+
Sbjct: 391 ---EQFVANAIKKLDTPVYYVIVNEAGASVYSASRVAREEFPDFSVEQRSAVSIARRIQD 447
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYG-MIEQVMVDVTNQVGLDINLAIHREW 664
PLA + + + ++ P ++ G ++QV+ NQVG+++N A
Sbjct: 448 PLAELVKIDPQAIGVGQYQ------HDVPQKQLGEKLDQVVETAVNQVGVNLNTA----- 496
Query: 665 QFAP--LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRS 722
+P L ISGL A ++ + +G R D LG K F +VGFLR+
Sbjct: 497 --SPDLLVHISGLTKSTANNIVKFRNESGKFSNRTDLKKVPRLGPKAFEQSVGFLRIING 554
Query: 723 GQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRP 782
LD+T IHPESY A +L + DL ++ + E
Sbjct: 555 SNP---------LDNTDIHPESYSAATKLLSQY-------DLTINDLGKPIVAE------ 592
Query: 783 DLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ----DWRNQYKEPSQDEEFYMISG 838
K LD + + + ETL R+++ G + D R+ P ++
Sbjct: 593 ---KLVHLDLPVVAQTIDVGEETL----RDIVKGIETPGRDLRDDMPTPLLKKDVL---- 641
Query: 839 ETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDW-RDSELSDKLHEGDI 897
T + L G +Q TVR V A + G++ S + RD S + GDI
Sbjct: 642 -TMEDLKPGMKLQGTVRNVVDFGAFVDIGVNQDGLVHISKMSKTFVRDP--SKLVSVGDI 698
Query: 898 LTCKIKSIQKNRYQVFL 914
+T I S+ NR+++ L
Sbjct: 699 VTVWIDSVDVNRHRIQL 715
>gi|315302310|ref|ZP_07873200.1| protein YhgF [Listeria ivanovii FSL F6-596]
gi|313629320|gb|EFR97563.1| protein YhgF [Listeria ivanovii FSL F6-596]
Length = 725
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 181/857 (21%), Positives = 348/857 (40%), Gaps = 190/857 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL D+ E I D+++ + + K
Sbjct: 36 VPFIARYRKEMTGSL--------------DEVE-------------IRDIEETFEYVTKL 68
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
++ +EE R+ DE +L D + ++ AE + ++D L+ P
Sbjct: 69 ENR---------KEEIIRLIDE-----QGKLTDELKNAIIKAEKHQALED------LYRP 108
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVAS---KFGYSSEQLGLQLSLEKMGDELED 253
YK+ KR TK + + GL +A+ F ++E LE+ + + +
Sbjct: 109 ----------YKQKKR-TKATIAKEKGLEPLANWLMSFPNNAE------PLEEAANYISE 151
Query: 254 PKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--- 310
KE S++ L GA + A +IS EP R+++R+ +V +
Sbjct: 152 EKEV-------------ESAELALLGAHEIIAEQISDEPAFREWIRNFTRKFGMVESRGK 198
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
D + +++F + + K + L + E+E +L+V +++ K
Sbjct: 199 NIEADEKGVYEMYYEF-------NEMIGKVASHRVLAFNRGEKEDILRVQVQV---DTTK 248
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
+F+ E + + S + E IL DA F+ P++ +E R ++ +A+ +
Sbjct: 249 IFAYLFEKVIQNRNSNTRPYV---EEAIL-DAYKRFIGPAIEREIRGELTEKAEEQAIHI 304
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFT 490
+ + L K+ + P + + D P C F +LD +G+V+++
Sbjct: 305 FSENL-RKLLLQPPLKGKIILGVD----PAFRTGC--------KFSVLDKTGKVLEI--- 348
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
G + + R ++K +++ + + +Q V+ +G S + + I +++
Sbjct: 349 GVVYPHTAKARRPEAK----QKIAEILATYQVEVIAIGNGTAS-----RETEQFIVEVIR 399
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E + + IV +E+ +Y S + ++ P + + AV++GR LQ+PLA +
Sbjct: 400 ESNSNAYY-----CIV--NEAGASVYSASETAREEFPDYQVEERSAVSIGRRLQDPLAEL 452
Query: 611 ATL----CGPGR---EILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHRE 663
+ G G+ ++ +L F V+ NQVG+++N A
Sbjct: 453 VKIDPKSVGVGQYQHDVAQKRLNETLTF------------VVETAVNQVGVNVNTA---- 496
Query: 664 WQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+ LQ+++GL A ++++ G+ +RK+ LG K + ++GFLR+
Sbjct: 497 -SASLLQYVAGLNKTVANNIRKFREENGSFTSRKELKKVPRLGAKSYEQSIGFLRILEGE 555
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQELAKEV--YNRDI-EGDLNDDEDALEMAIEHVRD 780
LD T IHPESY A+E+ + +DI DL + AL + E
Sbjct: 556 NP---------LDRTAIHPESYKAAEEIVQATGFELKDIGSEDLKEALQALSIPEEA--- 603
Query: 781 RPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGET 840
+K +ET+ I LI +D R++ P ++ +
Sbjct: 604 ----------------EKLAIGKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISM---- 643
Query: 841 EDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTC 900
D L +G +Q TVR V A + G++ S+ + + + D + GD++T
Sbjct: 644 -DDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNSFVKNPM-DIVSVGDVVTV 701
Query: 901 KIKSIQKNRYQVFLVCR 917
+ + + ++ L R
Sbjct: 702 WVDEVDTKKNRIALTMR 718
>gi|88802812|ref|ZP_01118339.1| putative RNA binding protein with S1 RNA-binding domain
[Polaribacter irgensii 23-P]
gi|88781670|gb|EAR12848.1| putative RNA binding protein with S1 RNA-binding domain
[Polaribacter irgensii 23-P]
Length = 684
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 127/560 (22%), Positives = 236/560 (42%), Gaps = 105/560 (18%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
YK+ KR TK + GL +A M ++ + + T + +N
Sbjct: 81 YKK-KRKTKAETARLQGLEPLAKMI---------------MAQQIANLESTASKYLNN-- 122
Query: 267 CAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTPDGDSAIDSFH 324
+ ++SQA L+ +R + A I+ VR +R+ +S+ T D F
Sbjct: 123 -EILSASQA-LEASRFIIAEWINERTDVRNSLRNQISRFGSISSKVIKTKINDEKAQKFK 180
Query: 325 QFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE-DSLNKLFSDCKEHYLSDG 383
+ +W ++ L + ++L I +AE+E ++V I + E D++ K+ +
Sbjct: 181 DY--FEW--QEALNRIPSHRFLAILRAEKEGFVRVKITIDENDAIQKI---------ENR 227
Query: 384 VSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGP 443
+ +S Q +L ++D+ L PS+ EA S+ +A ++ + K L + P
Sbjct: 228 IIRSQNTCTPQIQLAIQDSYKRLLFPSLANEALSIAKEKADLDAILVFSKNLKQLLLGAP 287
Query: 444 YQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTGCLTLRSQNV 500
K RVLA PG K V L++ G ++ DV++ QN
Sbjct: 288 LGEK------------RVLAI--DPGFKSGCKIVCLNAQGALLHHDVIYPHA----PQNQ 329
Query: 501 RDQQSKKNDQERLLKFMM-DHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHE 559
+ KK + F++ H+ + +G N + + + + E I
Sbjct: 330 TIEALKK------INFLVAKHKIEAIAVG--NGTASRETEQLLEKI------------QL 369
Query: 560 MDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CG 615
D++++ E+ +Y S+I+ ++ P V+ A+++GR LQ+PLA + + G
Sbjct: 370 QDKVAVFVISEAGASIYSASKIAREEFPNYDVTVRGAISIGRRLQDPLAELVKIDAKSIG 429
Query: 616 PGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGL 675
G+ L+ L ++E + N +G++IN A + L ++SG+
Sbjct: 430 VGQYQHDVDQIKLKKSLD-----ALVESCV----NTIGVNINTASE-----SLLSYVSGI 475
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
GP+ A ++ GA +R LG K F A GFLR++ L
Sbjct: 476 GPKIAENIVAYRTENGAFPSRTAIKKIPRLGGKAFEQAAGFLRIKHGENP---------L 526
Query: 736 DDTRIHPESYGLAQELAKEV 755
D++ +HPE Y L +++AK++
Sbjct: 527 DNSAVHPEMYSLVKKMAKDL 546
>gi|418966422|ref|ZP_13518163.1| Tex-like protein N-terminal domain protein [Streptococcus
constellatus subsp. constellatus SK53]
gi|383340243|gb|EID18555.1| Tex-like protein N-terminal domain protein [Streptococcus
constellatus subsp. constellatus SK53]
Length = 709
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 159/736 (21%), Positives = 299/736 (40%), Gaps = 173/736 (23%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
L++S+ + + L+L + IPFIA YRKE N D+ E
Sbjct: 9 AQSLNVSQKQVEKVLELTA-EGNTIPFIARYRKEMT--------------GNLDEVE--- 50
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
+ AI DLDK L++RK+ + + + EE+ + L D +
Sbjct: 51 -------IKAILDLDKSLTNLRERKATVLA----KIEEQGK-------------LTDKLR 86
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFG 232
++EAAE +V++ L+ P YK KR TK + +AGL+ +A
Sbjct: 87 AAIEAAEKLADVEE------LYLP----------YKE-KRRTKATIAREAGLFPLA---- 125
Query: 233 YSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
+L L+ T +E A+ F +++A L GA + IS +
Sbjct: 126 --------RLILQNAA--------TLQEEATALTNETFPTAEAALAGAVDILVEAISEDV 169
Query: 293 CVRKYV-RSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKA 351
+R + I ++++VST D+ +D F EK + + + L + +
Sbjct: 170 QLRAWTYHEILKNSSIVSTLK----DANLDEKQVFQIYYDFSEK-IADMQGYRTLALNRG 224
Query: 352 EEEKLLQVTIKLPEDSLNKLFS---DCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLL 408
E+ +L+V + + + + F K +Y+ + + + A+ ++
Sbjct: 225 EKLGVLKVGFEHNVEKIIRFFELRFKIKNNYIHEAIQQ---------------AVKKKII 269
Query: 409 PSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQ-RKDNDITPDEEAAPRVLACCWG 467
P+M + R+ ++ A+ + + L N + + P + R P + LA
Sbjct: 270 PAMERRIRAELTETAEDGAIQLFSDNLRNLLLIAPLKGRVVLGFDPAFRTGAK-LAVVDA 328
Query: 468 PGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVL 527
GK TT V+ ++ + + SK+ + + +F ++ ++ +
Sbjct: 329 TGKMLTTQVIYPVPP--------------AKAAQIEASKRELSDLIEQFGVE----IIAI 370
Query: 528 GAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
G S S + ++++ HP +S V +ES +Y S ++ + P
Sbjct: 371 GNGTASRES-----EAFVAEVLKTHPN--------VSYVIVNESGASVYSASELARHEFP 417
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---EILSWKLCPLENFLTPDEKYGM 640
+ A+++ R LQ+PLA + + G G+ ++ KL +F
Sbjct: 418 DLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSESLDF--------- 468
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAP--LQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
V+ V NQVG++IN A +P L ++GL + ++ + G I +R+D
Sbjct: 469 ---VVDTVVNQVGVNINTA-------SPSLLSHVAGLNKTISENIVKYREEEGMIHSRED 518
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNR 758
LG K F A GFLR+ S ++LD+T +HPESY ++L + + +
Sbjct: 519 IKKVPRLGAKAFEQAAGFLRIPESD---------NILDNTSVHPESYPAVEKLFQMLAIK 569
Query: 759 DIEGDLNDDEDALEMA 774
D+ D + +L++A
Sbjct: 570 DLNQDGQEKLQSLDVA 585
>gi|312597566|pdb|3PJP|A Chain A, A Tandem Sh2 Domain In Transcription Elongation Factor Spt6
Binds The Phosphorylated Rna Polymerase Ii C-Terminal
Repeat Domain(Ctd)
gi|312597567|pdb|3PJP|B Chain B, A Tandem Sh2 Domain In Transcription Elongation Factor Spt6
Binds The Phosphorylated Rna Polymerase Ii C-Terminal
Repeat Domain(Ctd)
Length = 199
Score = 81.6 bits (200), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
R+I HP + +A L +KE G+ +IR SSRG +L +T K+ ++ H DI E
Sbjct: 6 RVINHPYYFPFNGKQAEDYLRSKERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQELE 65
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
K++ + +GK L + + DLD+++ Y+ + L + S KF+ G+K EV +
Sbjct: 66 KENP-----LALGKVLVVEGQRYHDLDQIIVEYLQNKIRLLNELTSNEKFKAGTKKEVVK 120
Query: 1084 LLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
+ P + VY F +++E+PG F L +
Sbjct: 121 FIEDYSKVNPKKSVYYFSLNYENPGWFYLIF 151
>gi|397668506|ref|YP_006510043.1| transcriptional accessory protein [Legionella pneumophila subsp.
pneumophila]
gi|395131917|emb|CCD10210.1| transcriptional accessory protein [Legionella pneumophila subsp.
pneumophila]
Length = 789
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 136/637 (21%), Positives = 263/637 (41%), Gaps = 103/637 (16%)
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+Q R A + Y + +E I R ++L + +S+ AAET+ ++D+ L +
Sbjct: 53 VQLRFLAERLIYLRELDERRTVILQSIRE--QEKLTPELEQSILAAETKTRLEDLYLPY- 109
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDEL- 251
RPKR TK Q+ ++ LE + L
Sbjct: 110 ----------------RPKRRTK--------------------AQIAIEAGLEPLAHALW 133
Query: 252 EDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
+DP PEE AS F A ++QA L GARH+ + + + +R + +V
Sbjct: 134 KDPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELINELREYLWQHGIVK 193
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
+ + F + + + ++K + L + + E +LQV++ LP+ N
Sbjct: 194 SVGNSTKKDQANKFSDY----FDYSEAIKKIPSHRALALFRGRREGILQVSLVLPDQDAN 249
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
Y + V+ + + QR+ D +L+ + V+ + L+
Sbjct: 250 ---------YGENKVATYFNVTDRQRKA------DGWLIDT-VRMTWKIKLFTKLELELL 293
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVL 488
+ + ++ ++ + + D+ A P+V PG + V++D++G+++D
Sbjct: 294 TRLREIADEEAIKVFSKNLRDLLLAAPAGPQV-TIGLDPGIRTGVKVVVVDATGKLLD-- 350
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
++ QN Q L K +Q +++ +G N + + + + + KM
Sbjct: 351 YSVIFPFAPQNEWHQSIAD-----LAKLAAKYQVNLISIG--NGTGSRETERLVADLIKM 403
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
+ +L+ + E+ +Y S I++++ P +++ AV++ R LQ+PLA
Sbjct: 404 YPDL---------KLTKIIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLA 454
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ + E S + ++ + + ++ V+ D N VG+DIN A A
Sbjct: 455 ELVKI-----EAKSIGVGQYQHDVNQAKLARCLDGVVEDCVNAVGVDINTA-----SAAL 504
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L ISGL A ++ + GA R + +G+K F A GFLR+ A
Sbjct: 505 LSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNINRMGEKAFQQAAGFLRIMNGDNA--- 561
Query: 729 SQFIDLLDDTRIHPESYGLAQELA--KEVYNRDIEGD 763
LD + +HPE+Y L +++ K+V ++I G+
Sbjct: 562 ------LDASCVHPEAYPLVEKIISDKKVSIKEIIGN 592
>gi|417644463|ref|ZP_12294453.1| Tex-like protein N-terminal domain protein [Staphylococcus warneri
VCU121]
gi|330684832|gb|EGG96525.1| Tex-like protein N-terminal domain protein [Staphylococcus
epidermidis VCU121]
Length = 716
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 217/498 (43%), Gaps = 91/498 (18%)
Query: 272 SSQAVLQGARHMAAVEISCEPCVR-KYVRSIFMDNAVVSTCPTPDGDSA--IDSFHQFAG 328
S + +QGA+ + A +IS P R + +++++ +V+T D ++ +A
Sbjct: 152 SVEEAIQGAQDIIAEQISDNPKYRSRILKNVYQQGQIVTTKKKKAEDEKEIFSMYYDYA- 210
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+P++K + + L + + E+EK+L V I+ + + K D ++ + +A
Sbjct: 211 ------EPIKKIANHRVLAVNRGEKEKILSVKIEFDTEIVEK---DIEKQEIKRETEATA 261
Query: 389 QLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKD 448
+ + +KD+L ++PS+ +E R ++ +A++ + + + L N + P + K
Sbjct: 262 IIRD-----AIKDSLKRLIMPSIEREIRGDLTEKAENHAIDVFSENLRNLLLQPPMKGK- 315
Query: 449 NDITPDEEAAPRVLAC--CWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNV---RDQ 503
++L + G +++S G T ++NV
Sbjct: 316 -----------QILGVDPAFRTG---CKLAVINSYG-----------TFVAKNVIYPHPP 350
Query: 504 QSKKNDQERLL-KFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMD- 561
+K + E+++ K + D+ ++ +G S + E+ +V ++ +
Sbjct: 351 VNKTDTAEKIVVKMINDYDVQLIAIGNGTAS-------------RETEQFIANVINKFNL 397
Query: 562 ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPG 617
++ + +E+ +Y S I+ + P + + AV++GR +Q+PL+ + + G G
Sbjct: 398 KVQFIIVNEAGASVYSASEIARAEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSIGVG 457
Query: 618 REILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGP 677
+ LE LT V+ NQVG+D+N A + LQ++SGL
Sbjct: 458 QYQHDVNQKELEKALTF---------VVETAVNQVGVDVNTASR-----SLLQYVSGLSS 503
Query: 678 RKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDD 737
+ A +L GAI KD LG K F ++GF+R+ + LD+
Sbjct: 504 QIAQNLIEYREENGAIKHHKDIAKVKRLGAKTFEQSIGFMRIVDGTEP---------LDN 554
Query: 738 TRIHPESYGLAQELAKEV 755
T IHPESY + +L ++
Sbjct: 555 TSIHPESYDVTYQLLNQL 572
>gi|54295658|ref|YP_128073.1| hypothetical protein lpl2746 [Legionella pneumophila str. Lens]
gi|53755490|emb|CAH16989.1| hypothetical protein lpl2746 [Legionella pneumophila str. Lens]
Length = 789
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 136/637 (21%), Positives = 263/637 (41%), Gaps = 103/637 (16%)
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+Q R A + Y + +E I R ++L + +S+ AAET+ ++D+ L +
Sbjct: 53 VQLRFLAERLIYLRELDERRTVILQSIRE--QEKLTPELEQSILAAETKTRLEDLYLPY- 109
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDEL- 251
RPKR TK Q+ ++ LE + L
Sbjct: 110 ----------------RPKRRTK--------------------AQIAIEAGLEPLAHALW 133
Query: 252 EDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
+DP PEE AS F A ++QA L GARH+ + + + +R + +V
Sbjct: 134 KDPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELINELREYLWQHGIVK 193
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
+ + F + + + ++K + L + + E +LQV++ LP+ N
Sbjct: 194 SVGNSTKKDQANKFSDY----FDYSEAIKKIPSHRALALFRGRREGILQVSLVLPDQDAN 249
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
Y + V+ + + QR+ D +L+ + V+ + L+
Sbjct: 250 ---------YGENKVAAYFNVTDRQRKA------DGWLIDT-VRMTWKIKLFTKLELELL 293
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVL 488
+ + ++ ++ + + D+ A P+V PG + V++D++G+++D
Sbjct: 294 TRLREIADEEAIKVFSKNLRDLLLAAPAGPQV-TIGLDPGIRTGVKVVVVDATGKLLD-- 350
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
++ QN Q L K +Q +++ +G N + + + + + KM
Sbjct: 351 YSVIFPFAPQNEWHQSIAD-----LAKLAAKYQVNLISIG--NGTGSRETERLVADLIKM 403
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
+ +L+ + E+ +Y S I++++ P +++ AV++ R LQ+PLA
Sbjct: 404 YPDL---------KLTKIIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLA 454
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ + E S + ++ + + ++ V+ D N VG+DIN A A
Sbjct: 455 ELVKI-----EAKSIGVGQYQHDVNQAKLARCLDGVVEDCVNAVGVDINTA-----SAAL 504
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L ISGL A ++ + GA R + +G+K F A GFLR+ A
Sbjct: 505 LSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNINRMGEKAFQQAAGFLRIMNGDNA--- 561
Query: 729 SQFIDLLDDTRIHPESYGLAQELA--KEVYNRDIEGD 763
LD + +HPE+Y L +++ K+V ++I G+
Sbjct: 562 ------LDASCVHPEAYPLVEKIISDKKVSIKEIIGN 592
>gi|317057260|ref|YP_004105727.1| Tex-like protein [Ruminococcus albus 7]
gi|315449529|gb|ADU23093.1| Tex-like protein [Ruminococcus albus 7]
Length = 760
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 149/681 (21%), Positives = 276/681 (40%), Gaps = 151/681 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL DD +V+ ++D L+KR
Sbjct: 31 IPFIARYRKEVTGSL--------------DD----------QVIRELYDRLTYLRNLEKR 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K EE I ++ +++ D I+ ++E A T EV+D+ +
Sbjct: 67 K-----------EEVVNAITEQ------EKMTDEIAAAIEKAVTLVEVEDI-------YR 102
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
P YK PKR T+ S + GL +A ++ DP
Sbjct: 103 P---------YK-PKRKTRASIAREKGLEPLAEIILAQADST--------------DP-- 136
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPTPD 315
T E A + + A +QGA + A ++S +RK +R + ++ + S+ + D
Sbjct: 137 TAEAAAFVSEEKGVADAAAAVQGAMDIIAEDVSDNAELRKALREAYNNSGKITSSAASED 196
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
D+ ++ +++ + + K + L + + E+E L+V+I +PE ++ C
Sbjct: 197 ADAVYQNYFEYS-------ENVSKTAGHRVLALDRGEKEGALKVSIDIPEGMGEEI---C 246
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
+ Y+ + S +L E D+ + PS+ +E R+ +S A+ + + L
Sbjct: 247 RGQYVKND-SACGKLVAAACE----DSFSRLIAPSVEREIRAELSANAQEGAIKVFSSNL 301
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFV-MLDSSGEVVDVLFTGCLT 494
+ P + N +T PG V +D +G+V+D T +
Sbjct: 302 RQLLMAPPVK---NTVT-----------LGLDPGYAHGCKVATVDETGKVLD---TAIVY 344
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
L R ++++K + + K+ V + N + + +D + + ++
Sbjct: 345 LTQSERRKEEARKVLTDMIKKY------GVTTIAIGNGTASRETEDFTAELIRGIDS--- 395
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
++S + E+ +Y S++++++ P +++ AV++ R LQ+PLA + +
Sbjct: 396 -------KVSYMVVSEAGASVYSASKLAAEEFPDYDVSLRSAVSIARRLQDPLAELVKID 448
Query: 614 ---CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
G G+ +++ L G++E D N VG+D+N A ++ L
Sbjct: 449 PKAVGVGQYQHDMPKARMDDALK-----GVVE----DCVNSVGVDVNTA-----SYSLLS 494
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
+I+G+ A ++ GA RK + LG K + GFLRV +
Sbjct: 495 YIAGINSAVAKNIVLYREENGAFTDRKQLLKVKKLGAKAYEQCAGFLRVPEAKNP----- 549
Query: 731 FIDLLDDTRIHPESYGLAQEL 751
D+T IHPESY A+ L
Sbjct: 550 ----FDNTGIHPESYAAAKAL 566
>gi|408675297|ref|YP_006875045.1| Tex-like protein [Emticicia oligotrophica DSM 17448]
gi|387856921|gb|AFK05018.1| Tex-like protein [Emticicia oligotrophica DSM 17448]
Length = 708
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 106/502 (21%), Positives = 210/502 (41%), Gaps = 74/502 (14%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
E +A + + LQGAR + A I+ + R VR +F A++++
Sbjct: 138 EAIAEKYLNEQVENVNDALQGARDIMAEWINEDIQARNAVRKLFEREAIITSKVKKGKKE 197
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPE----DSLNKLFSD 374
+ + + +PL K + L +++ EEE +L + I + D+L+++
Sbjct: 198 EGIKYQDY----YDFSEPLSKIPSHRLLALRRGEEEGILSIDISIEVERGVDALDRI--- 250
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
YL G+ ++ +Q E + D+ D L PS+ E ++ RA S + +
Sbjct: 251 ----YLR-GLPEA----KEQVEQAISDSYDRLLKPSIETEFSNISKQRADSEAIKIFATN 301
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCL 493
L + P +K RVL PG + V L+ G D+LF +
Sbjct: 302 LRQLLLASPLGQK------------RVLGI--DPGFRTGCKTVCLNEQG---DLLFDTVI 344
Query: 494 TLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHP 553
+ + + K K +++++ + +G N + + + + + K
Sbjct: 345 YPMDKKIEAEAVVK-------KLILEYRIDAIAIG--NGTASRETEAFIKNLIK------ 389
Query: 554 RDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL 613
+ + ++++ E +Y S I+ D+ P + V+ A+++ R L +PLA + +
Sbjct: 390 --ASNGLLKVAVHVVSEQGASIYSASPIARDEFPNKDVTVRGAISIARRLMDPLAELVKI 447
Query: 614 CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFIS 673
+ ++ + L ++ V+ N VG+++N A L ++S
Sbjct: 448 DPKSIGVGQYQHDVEQKMLKES-----LDSVVESCVNLVGVELNTASKH-----LLSYVS 497
Query: 674 GLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFID 733
GLGP A ++ + GA +R++ LG K F GFLR+R +
Sbjct: 498 GLGPSLAQNIVEYRAKNGAFSSREELKKVPRLGAKAFEQCAGFLRIRGAENP-------- 549
Query: 734 LLDDTRIHPESYGLAQELAKEV 755
LD++ +HPE+Y + Q++AK++
Sbjct: 550 -LDNSAVHPETYAIVQKMAKDL 570
>gi|224368955|ref|YP_002603119.1| transcriptional accessory protein (S1 RNA binding domain-containing
protein) [Desulfobacterium autotrophicum HRM2]
gi|223691672|gb|ACN14955.1| transcriptional accessory protein (S1 RNA binding domain protein)
[Desulfobacterium autotrophicum HRM2]
Length = 703
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 161/697 (23%), Positives = 270/697 (38%), Gaps = 157/697 (22%)
Query: 63 IMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWA 122
I F D Q IPFIA YRKE+ SL +EV V+
Sbjct: 19 IANFFD----QGATIPFIARYRKEQTGSL------DEV------------------VIAE 50
Query: 123 IHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER 182
I D K+ R+ + + EE + + R A+N+ A T+
Sbjct: 51 IRDRITKFKEFSARQQVIIASL-----EERDLMTENLRQAINR------------ATTKA 93
Query: 183 EVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQL 242
E++D+ KF RPKR T+ + + GL +A L
Sbjct: 94 ELEDLFEKF-----------------RPKRKTRAQTAREQGLEPLA-------------L 123
Query: 243 SLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIF 302
+L K D+ DP+ K + + L GAR + A + +P +R VR +F
Sbjct: 124 TLLKQRDK--DPQIEALPFVDTAKGV--ETVEQALAGARDILAETFNEDPTLRARVRKLF 179
Query: 303 MDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIK 362
A++S ++ F + W + K + L + + E +L V +
Sbjct: 180 ESKAILSARVKKGKEAEGAKFRDY--FDW--SESAAKSPSHRILAMFRGEAAAILTVHVL 235
Query: 363 LPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGR 422
PE++ + E + +++A + + +KDA + S+ KE + + R
Sbjct: 236 PPEETALAII----EQRIVKNSTRAAL----EVKAAIKDAYKRLMGKSLEKETMANLKQR 287
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSS 481
A + + + + P +K RVLA PG + V LD
Sbjct: 288 ADQEAIGVFAGNIRELLLFSPLGQK------------RVLAI--DPGFRTGCKIVCLDQQ 333
Query: 482 GEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
G +V G + S + D+ +K L K +H+ + +G + T+ ++
Sbjct: 334 GTLV---HHGVIYPFSDS--DKAAKT-----LKKLTREHETEAIAIG----NGTAGRE-- 377
Query: 542 YEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGR 601
E R G D++ + DES +Y S+I+ D+ P Q V+ AV++GR
Sbjct: 378 -------TEAFVRQAGLG-DKIQTIMVDESGASIYSASQIARDEFPDQDITVRGAVSIGR 429
Query: 602 YLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDIN 657
L +PLA + + G G+ L+ L + V+ N+VG+++N
Sbjct: 430 RLMDPLAELVKIDPKSIGVGQYQHDVDQKALQTTL---------DDVISFCVNRVGVEVN 480
Query: 658 LAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFL 717
A A L ++GL AA++ G TR+D + LG + F + GFL
Sbjct: 481 TA-----SAALLTHVAGLNTTIAANIINFRKENGPFTTRRDLLKVPRLGPRAFEQSAGFL 535
Query: 718 RVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
R+ S + LD + IHPESY + + +AK+
Sbjct: 536 RI---------SDGKNPLDRSGIHPESYTIVESMAKD 563
>gi|62484314|ref|NP_651070.3| CG31156 [Drosophila melanogaster]
gi|16768960|gb|AAL28699.1| LD12377p [Drosophila melanogaster]
gi|61679372|gb|AAF56028.3| CG31156 [Drosophila melanogaster]
gi|220950410|gb|ACL87748.1| CG31156-PA [synthetic construct]
Length = 948
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 175/414 (42%), Gaps = 50/414 (12%)
Query: 344 QWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
Q L I + E+ K L V I+ + L + Y++ G+ + +RE+ K
Sbjct: 425 QMLAINRGEKHKWLSVKIETNDYLKRDLMRYITDQYMNQGLQ-----YPLRREVFTKSLE 479
Query: 404 DNF---LLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPR 460
+ + L P M ++ R+ + + + + K L + + P + R
Sbjct: 480 ECYAKKLQPLMCRQIRAALKEKGTKAAIDVFAKNLKQLLLISPLK------------GER 527
Query: 461 VLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDH 520
+L PG + L S E DVL+TG + +K+ +++L++ + DH
Sbjct: 528 ILGI--DPGFINGCKLALIS--ETADVLYTGVIYPHGA----MSNKRAAEQKLVQLLSDH 579
Query: 521 QPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSR 580
++ LG +C + + + H + + SIV +E+ +Y S
Sbjct: 580 NCKIIGLGN-GTACRETEHWLTGMF------HAGVLDSRIIRYSIV--NENGASIYSCSN 630
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGM 640
+++ + P N + AV++ R L +PL+ + + ++ E LT
Sbjct: 631 VAAKEFPKMDTNERSAVSIARRLNDPLSEYVKIEPRHLGVGMYQHDVPEKILT-----AS 685
Query: 641 IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFV 700
+ V+ + + VG+D+N A + L+ I+GL +KA + + G TRKD +
Sbjct: 686 LNDVVSECVSYVGVDLNTA-----SLSVLKHIAGLSEKKAEKIIEHRTQKGPFKTRKDLL 740
Query: 701 TAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
+ +G+K FV GF+R+ + Q + LD T +HPESY + + + E
Sbjct: 741 SVRSIGEKSFVQCAGFVRIE---PRSVGGQLQNPLDCTWVHPESYNVVESIVGE 791
>gi|325955240|ref|YP_004238900.1| Tex-like protein [Weeksella virosa DSM 16922]
gi|323437858|gb|ADX68322.1| Tex-like protein [Weeksella virosa DSM 16922]
Length = 709
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 208/509 (40%), Gaps = 86/509 (16%)
Query: 259 EEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR-SIFMDNAVVSTC----PT 313
E + + +++ L GA+H+ I+ VRK +R ++F + V S +
Sbjct: 137 ENLQKKYLSREITTTKDALDGAKHIITQWINEHENVRKQLRKAMFHEGKVKSLLIKGKES 196
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
+ S ++ F E+P+++ + L + + E E LL+V KL D L
Sbjct: 197 EENASKFSNYFDF-------EEPIKRIPAHRLLAVLRGENEGLLRV--KLAFDQQQAL-- 245
Query: 374 DCKEHYLSDGVSKSAQL-WNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + K+ Q + E K+A +L PS+ E A + +
Sbjct: 246 ----EIIRQKIIKTQQKEVQNFLETACKEAYTKYLEPSLTTELMQQAKKDADVLSISIFS 301
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTG 491
K L + PY K R+LA PG K V LD +G +
Sbjct: 302 KNLQQLLLTPPYGEK------------RILAI--DPGFKSGCKVVCLDENGGL------- 340
Query: 492 CLTLRSQNVRDQQSKKND---QERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
L ++N+ K Q+++ + +Q + +G S + I K+
Sbjct: 341 ---LHNENIYPHAPKNESIPAQKKIRSLVNAYQIQAIAIGNGTAS-----RETEHFIQKI 392
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
+ P DV E+ +Y S I+ ++ P + V+ AV++GR L +PLA
Sbjct: 393 AFDRPLDV---------FVVSEAGASIYSASAIAREEFPDKDVTVRGAVSIGRRLSDPLA 443
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ + I ++ + L + ++Q ++ NQVG+++N A +P
Sbjct: 444 ELVKINPKSIGIGQYQHDVNQTLLKEE-----LDQTVMFCVNQVGVNLNTA-------SP 491
Query: 669 --LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
LQ++SG+G + A ++ + + G RKD + G+K F+ A FLR+
Sbjct: 492 HLLQYVSGIGKKLAENIVQYRTKNGPFECRKDLLKVPSFGEKAFLQASAFLRIANGKNK- 550
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEV 755
LD++ +HPESY + +++A ++
Sbjct: 551 --------LDNSAVHPESYSIVEKIANDL 571
>gi|188585248|ref|YP_001916793.1| RNA binding S1 domain-containing protein [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179349935|gb|ACB84205.1| RNA binding S1 domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 727
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 184/848 (21%), Positives = 354/848 (41%), Gaps = 167/848 (19%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PF+A YRK NE N + D+ R+ +W ++ LQ R
Sbjct: 34 VPFVARYRK------------NETGNLSEDEL-RSIVERWDYLVN-----------LQDR 69
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K+ + + +KR ++L + ++++ +ET +E+++ L+ P
Sbjct: 70 KAEIIATLEKR-----------------EKLTPELKEAIQKSETMQELEE------LYKP 106
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ K+ T+ + GL +A+K + G EL+ E
Sbjct: 107 ----------YKQ-KKKTRGMKAKEKGLEPLANKL--------------RQG-ELKTEAE 140
Query: 257 TPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTP 314
E AS+F NS+ LQGA+ + A +IS R+ V+ I A + T
Sbjct: 141 A-ESTASDFIDDEQGVNSTDEALQGAQDIIAEQISETVDNRRDVKEI---AAPETYLETQ 196
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
D A D + RE L+K + + I + E+E +L+V++ PE+ +
Sbjct: 197 LKDQAQDENKVYQDYYDYREN-LKKMPLHRAMAINRGEKEGVLKVSLSSPEERI------ 249
Query: 375 CKEHYLSDGVSKSAQLWNDQRELI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
+ L + VS ++ REL+ +KDA ++PS+ +E R+ + +A+ + +
Sbjct: 250 IDKVALRELVSLENAGFS--RELVFEAVKDACKRLIIPSIQRELRTSKTEQAEEHAIKIF 307
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLF 489
+ L + P + K N + D P + C ++D G++ VDV++
Sbjct: 308 SQNLERLLMQPPIKGK-NVMGID----PAYKSGC--------KIAVVDYKGDMQEVDVIY 354
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
N +Q +KK ++ + +Q ++ +G S + + V
Sbjct: 355 PTP----PFNKTEQAAKK-----VISLLNKYQVEIIAIGNGTASRET---------EEFV 396
Query: 550 EEHPRDVGHEMD-ELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
E DV ++ + +IV D + +Y S++++++ P + A+++ R + +PLA
Sbjct: 397 SETIEDVELSLEVQYAIVSEDGA--SVYSASKLAAEEFPELDVQERSAISIARRVIDPLA 454
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD-VTNQVGLDINLA-IHREWQF 666
+ + + ++ P K Q +V+ V NQVG+D+N A +H
Sbjct: 455 ELVKIDPKSIGVGQYQ------HDVPQSKLKEAVQFVVEKVVNQVGVDVNTASVHL---- 504
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
L++ISGL + A ++ + G +R GLG K F GFLR+
Sbjct: 505 --LRYISGLNKKSAENMVNTRSELGGFDSRAQLTEVKGLGAKTFEQCAGFLRILDGSNP- 561
Query: 727 SSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLK 786
LD T IHPESY +A+ + + E N +AL ++ + + + ++
Sbjct: 562 --------LDKTAIHPESYHIAEGIIAHLN----EVPENIGSEALRTGVDSLLNNKNQIQ 609
Query: 787 TYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAE 846
+ ++ + + TL I L D R ++ +P ++ + + L+E
Sbjct: 610 SLC-------QEFDTDKYTLEDILTGLKKPLYDPREEFDKPRLKKDVMKL-----EDLSE 657
Query: 847 GRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQ 906
G +++ +R V A L G++ + S+ + + + + GD++ +I SI
Sbjct: 658 GMILEGEIRNVVDFGAFVDLGIKEDGLIHISNLSEKFVKHPM-EIVSVGDVVQVEIVSID 716
Query: 907 KNRYQVFL 914
K+R ++ L
Sbjct: 717 KDRGRIGL 724
>gi|406830523|ref|ZP_11090117.1| RNA binding S1 domain-containing protein [Schlesneria paludicola
DSM 18645]
Length = 783
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 127/595 (21%), Positives = 238/595 (40%), Gaps = 115/595 (19%)
Query: 166 QLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLW 225
+L + +E A++ + +DD+ L F RPKR ++ + + GL
Sbjct: 87 KLTPGLKSEIEQADSLKRLDDLYLPF-----------------RPKRRSRATMAKERGLE 129
Query: 226 EVASKFGYSSEQLGLQLSLEKMGDELEDPK-ETPEEMASNFKCAMFNSSQAVLQGARHMA 284
+A S +LE +G + P+ E P+ + L+GA +
Sbjct: 130 PLADSIWNQSTS---GQTLESVGAKYIRPENEVPD-------------ANKALEGAADII 173
Query: 285 AVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQ 344
A I + +R+ R++ + + + T D + F + + +P+ K +
Sbjct: 174 AERIGDDANLRELCRAVARETGQLKSFGTKSADQSHPEFRDY----FEYAEPISKIPPHR 229
Query: 345 WLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKE---HYLSDGVSKSAQLWNDQRELILKD 401
L + + EE+K L+VT ++ ++ D E H + +S A D
Sbjct: 230 ILALNRGEEQKALRVTFTWNDERATRVTCDHLELDRHRHREFMSACA-----------SD 278
Query: 402 ALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRV 461
AL+ F+ P++ +E R ++ +A+ + + + L N + P + RV
Sbjct: 279 ALERFVQPALDREFRRDLTEKAERHAISVFAQNLRNLLLQPPLHSQ------------RV 326
Query: 462 LACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDH 520
LA PG + +LD G VV V L+ + K + +L+ + +H
Sbjct: 327 LAI--DPGFRTGCKLAVLDEVGSVVVVDVMYILS--------DEKKGEAKTKLVTLIREH 376
Query: 521 QPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSR 580
V+V+G +C ++ + E+I E E+ + +E+ +Y S
Sbjct: 377 GCQVIVIGN-GTACRETEELVTEMI-----------ASECPEVQYIVVNEAGASIYSTSS 424
Query: 581 ISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGREILSWKLCPLENFLTPDE 636
++ + P + +++GR LQ+PL+ + + G G L L++ L
Sbjct: 425 VAQQEFPQLDAIARGTISIGRRLQDPLSELVKIEPQHIGVGMYQHDLNLKQLKDAL---- 480
Query: 637 KYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTR 696
+QV+ N VG+DIN A + L +SG A + + G+ R
Sbjct: 481 -----DQVVESCVNYVGVDINRA-----SSSLLAHVSGFNQLLARRVVEYRDKQGSFTNR 530
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQEL 751
+ + G+G F A GFL++ + D+T IHPESY +A++L
Sbjct: 531 QQLLNVPGIGPATFTQAAGFLKLDGD----------EPFDNTWIHPESYDIARKL 575
>gi|403381781|ref|ZP_10923838.1| hypothetical protein PJC66_18316 [Paenibacillus sp. JC66]
Length = 784
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 140/680 (20%), Positives = 269/680 (39%), Gaps = 147/680 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE + + ++D RT +++R
Sbjct: 93 IPFIARYRKE-------------MTGEMDEDTLRT---------------------IEER 118
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
LQS + R E R I ++ +L+ Q +E A +EV+D L+ P
Sbjct: 119 LHYLQSL-EDRKREVIRIIEEQGKLSAELQ------AEIEQATKLQEVED------LYRP 165
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
R KR T+ S + GL +A+ LS + GD L +
Sbjct: 166 -----------YRQKRKTRASVAKEKGLEPLANWI----------LSQPREGDVLTEAAR 204
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN-AVVSTCPTPD 315
+E S++ LQGA+ + A ++ EP +R +VR D AV++ D
Sbjct: 205 YIDEEKE------VASAEDALQGAKDIIAEMMADEPKIRAWVRKYVWDRGAVITKAKDAD 258
Query: 316 GDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDC 375
+S + ++ + ++P+ K + L I + E E++L+V+I++ + K++
Sbjct: 259 QESVYEMYYDY-------QEPVNKLPSHRILAINRGEREEVLKVSIEVQAE---KIYDYM 308
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
HY+ S + + + +++DA + P++ +E R+ ++ +A+ + + + L
Sbjct: 309 NRHYIKRWGSIAVPVIEE----VVEDAYKRLIAPAVEREIRNQLTEKAEEQAIQIFSENL 364
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTL 495
+ + P + K V+ + ++D +G+V+D+ T
Sbjct: 365 RHLLLQPPVKGK-------------VVLGVDPAFRTGCKLAVVDETGKVLDIAVTYPTA- 410
Query: 496 RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRD 555
K ++ + +Q ++V+G + + + E+I ++ E +
Sbjct: 411 ------PHHKTKEAKQIFHDLIGRYQVSLIVIGN-GTASRETEQFVAELIGEIRERN--- 460
Query: 556 VGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL-- 613
L + E+ +Y S+++ + P + A+++ R +Q+PLA + +
Sbjct: 461 -------LEYIIVSEAGASVYSASKLAQQEFPDLDVAERSAISIARRMQDPLAELVKIDP 513
Query: 614 --CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
G G+ LE L+ V+ N VG+D+N A + L +
Sbjct: 514 KSIGVGQYQHDVTQKRLEESLS---------AVVESAVNHVGVDLNTA-----SPSLLSY 559
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
++G+ A ++ + G R LG K F VGF+R+
Sbjct: 560 VAGVNATLAKNIVKFREENGKFLNRSQLKKVPRLGAKTFEQCVGFMRISDGDYP------ 613
Query: 732 IDLLDDTRIHPESYGLAQEL 751
LD+T IHPESY + +L
Sbjct: 614 ---LDNTPIHPESYDVVDKL 630
>gi|429762756|ref|ZP_19295135.1| Tex-like protein [Anaerostipes hadrus DSM 3319]
gi|429180996|gb|EKY22193.1| Tex-like protein [Anaerostipes hadrus DSM 3319]
Length = 713
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 149/675 (22%), Positives = 283/675 (41%), Gaps = 150/675 (22%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
IPFIA YRKE SL +D+ R +H+ L + +L ++R
Sbjct: 31 IPFIARYRKEMTGSL-------------DDETLRN----FHERLLYLRNL-------EER 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K A+ KK EE+ + L ++K +E A+T V+D L+ P
Sbjct: 67 KEAI----KKNIEEQGK-------------LTKELAKQIEEAKTLVAVED------LYRP 103
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR T+ + GL +A+ + LQ++ KE
Sbjct: 104 ----------YKQKKR-TRAMIAKEKGLEPLAN-------LILLQMT-----------KE 134
Query: 257 TPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNA-VVSTCPT 313
T E+ A F + + + L+GA + A I+ + R ++R ++ + S+
Sbjct: 135 TLEKEAEAFINEEKDVKTVEDALKGANDIIAERIADDAEYRTWIRKATWNHGKITSSAKK 194
Query: 314 PDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFS 373
P+ S + ++ F E+P+ K + L I + E+E +LQV I E + K+ S
Sbjct: 195 PEESSVFEMYYDF-------EEPIEKIAGYRILAINRGEKEGILQVKI---EPDMQKIAS 244
Query: 374 DCKEHYLSDGVSKSAQLWNDQRELI--LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
YL+ + + + N + L ++D+ + PS+ ++ R+ ++ A + + +
Sbjct: 245 -----YLARKII-TRKNPNTTKALFAAIEDSYKRLIAPSIERDIRNELTENASTEAIKVF 298
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFT 490
GK L + P A VL W P + ++D++G+V+D +
Sbjct: 299 GKNLAQLLMQPPI------------AGQVVLG--WDPAFRTGCKLAVVDATGKVLDTVVI 344
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
Q+K + ++++K ++ + + + L ++ S + + +I+ M++
Sbjct: 345 YPTA--------PQNKVEEAKKVVKALI--KKYGITLISIGNGTASRESE--QIVVDMLK 392
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
E V + V +E+ +Y S++++++ P + A ++ R +Q+PLA +
Sbjct: 393 EIKEPVQY-------VITNEAGASVYSASKLATEEFPNFDVGQRSATSIARRVQDPLAEL 445
Query: 611 ATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
+ + ++ + LT E G + + V N+VG+D+N A + L+
Sbjct: 446 VKIEPKAIGVGQYQHDMNQKQLT--EALGGVVEATV---NKVGVDLNTA-----SASLLE 495
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
++SG+ A ++ G RK + LG K F GFLRV +
Sbjct: 496 YVSGVSKTVAKNIVAYREENGTFRNRKQLLKVAKLGPKAFEQCAGFLRVSGGDEP----- 550
Query: 731 FIDLLDDTRIHPESY 745
LD T +HPE+Y
Sbjct: 551 ----LDATGVHPETY 561
>gi|329766870|ref|ZP_08258398.1| hypothetical protein HMPREF0428_00095 [Gemella haemolysans M341]
gi|328837595|gb|EGF87220.1| hypothetical protein HMPREF0428_00095 [Gemella haemolysans M341]
Length = 722
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 200/450 (44%), Gaps = 81/450 (18%)
Query: 315 DGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
D +S ++++F + + K + L + +AE+E +++V+I+ +D L+
Sbjct: 203 DENSTYKNYYEFG-------EQISKIASHRILALNRAEKEGIIRVSIENDKDRLH----- 250
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILK---DALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
+Y+ G++K+ Q + EL+L+ D++ + PS+ +E RS ++ +A+ ++ +
Sbjct: 251 ---NYILRGLTKNRQTAIN--ELLLECIADSMKRLIYPSIEREIRSDLTKKAEEDSVVIF 305
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLAC--CWGPGKPETTFVMLDSSGEVVDVLF 489
+ L + P + K +VL + G ++D G +D +
Sbjct: 306 SENLKQLLMQSPLKNK------------KVLGIDPAFRTG---CKMAIVDEYGNFIDKMV 350
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
+ +V Q+ K D L+KF+ H +++ +G S + K V
Sbjct: 351 --IYPHKPASVDKQEKSKKD---LIKFINKHNINLIAIGNGTASRET---------EKFV 396
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
E+ ++ G + D V +E+ +Y S ++ ++ P + AV++ R +Q+PL+
Sbjct: 397 VENLKEAGLKKD---YVIVNEAGASVYSASEVAREEFPDFNVEERSAVSIARRIQDPLSE 453
Query: 610 VATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ + G G+ + P FL + + V+ N+VG+++N A
Sbjct: 454 LVKIDPKSIGVGQ--YQHDITP--KFLEKELTF-----VVETAVNKVGVNVNTA-----S 499
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQA 725
+ L ++SG+ + A ++ G I T K+ LGKK + VGF R+ S
Sbjct: 500 VSLLSYVSGVNKQIAKNIVAYRQENGKIETIKEIAKVPRLGKKTYEQCVGFFRISDSK-- 557
Query: 726 ASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
++ D T IHPESY A+ L KE+
Sbjct: 558 -------NIFDATGIHPESYKAAENLLKEL 580
>gi|335431304|ref|ZP_08558183.1| transcription accessory protein [Haloplasma contractile SSD-17B]
gi|334886591|gb|EGM24946.1| transcription accessory protein [Haloplasma contractile SSD-17B]
Length = 729
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 137/655 (20%), Positives = 267/655 (40%), Gaps = 111/655 (16%)
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKP 336
+QGA+ + A S RKY++ IF + ++T + + + + +P
Sbjct: 164 IQGAKDIIAEIASDNADFRKYIKHIFFNEGSITTKVKDESKDERKVYEMY----YDYHEP 219
Query: 337 LRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
++ + L + + E+EK+L+V+++ P D + HYL ++ + N + E
Sbjct: 220 VKSVVPHRILAMNRGEKEKVLKVSLEEPFDKII--------HYL-----ETQMIQNSKSE 266
Query: 397 LI------LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDND 450
+ ++D L S+ +E RS + +A+ + + + + N + P + K
Sbjct: 267 VTPYIKSAIEDGYKRLLKNSIEREIRSELKDKAEDQAINIFSENVRNLLLQPPMKGK--- 323
Query: 451 ITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDV-LFTGCLTLRSQNVRD---QQSK 506
V+ + +++ +G+V+D+ + + + ++D ++K
Sbjct: 324 ----------VVLGVDPAFRTGCKLAVVNDTGKVLDISVIYPHEKYKGETIKDDRVSKAK 373
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
K Q++L+ ++ ++ +G S + I ++ +DV + +
Sbjct: 374 KTVQDKLI----ENNVEIIAIGNGTASRET-----EAFIVDTIKNIQQDVSY-------L 417
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL----CGPGR---E 619
E+ +Y S ++ + P + + A+++ R LQ+PLA + + G G+ +
Sbjct: 418 IVSEAGASVYSASTLAKKEFPKLQVEERSAISIARRLQDPLAELVKIDPKSIGVGQYQHD 477
Query: 620 ILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRK 679
+ KL NF V+ NQVG+++N A A L+++SG
Sbjct: 478 VTQSKLNDSLNF------------VVETAVNQVGVNVNTA-----SPALLKYVSGCNASV 520
Query: 680 AASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTR 739
A + G R + G G K F A+GFLR+ + LD T
Sbjct: 521 AKKIVAFRDDNGRFTNRDQLLNVKGFGPKSFEQAIGFLRILDGDRP---------LDKTP 571
Query: 740 IHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR 799
IHPESY A ++ + E DL DE L++A+ +V DR + L H
Sbjct: 572 IHPESYDAALKILDSLGFT--EKDLGRDE--LKLAVRNV-DRNKFQELTGLGEH------ 620
Query: 800 ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQG 859
TL I LI +D R+++ +P ++ + ED + EG TVR V
Sbjct: 621 -----TLNDILDALIAPNRDMRDKFSKPLLKKDVLKLEDLKEDMIIEG-----TVRNVVD 670
Query: 860 QRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFL 914
A + G++ S + +D + GDI+ K+ + N+ ++ L
Sbjct: 671 FGAFVDCGVKVDGLVHISKLSKSYVKHP-TDLVSVGDIVKVKVIDVDTNKQRLAL 724
>gi|440796295|gb|ELR17404.1| Texlike RNA-binding protein, putative [Acanthamoeba castellanii
str. Neff]
Length = 1015
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 167/378 (44%), Gaps = 65/378 (17%)
Query: 396 ELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDE 455
E + D+L+ LLPS+ +E R+ ++ +A+ + + + + N + + P R + D
Sbjct: 553 EQAIADSLNRLLLPSLKRELRAKLTEQAEQQAISIFARNVEN-ILIAPPVRGKTILGID- 610
Query: 456 EAAPRVLACCWGPGKPETTFVMLDSSGEV-VDVLFTGCLTLRSQNVRDQQSKKNDQERLL 514
P + C ++D V VD ++ ++ +S RL
Sbjct: 611 ---PGFRSGCK--------LAVIDEGQLVEVDTIYPH---------KNARSYSEAMTRLA 650
Query: 515 KFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPR 574
+ ++ H ++V +G + T ++ E++ + ++ H D HE + +IV ES
Sbjct: 651 ELVVAHGVNLVAIG----NGTGHRE-AEELVSETIKRHLPD--HEALQFAIV--SESGAS 701
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLEN---- 630
Y S ++ + P + + V++ R LQ+PL+ EI+ P+EN
Sbjct: 702 AYSASPEAAQEFPELEAQQRGTVSIARRLQDPLS----------EIIK---VPVENIGVG 748
Query: 631 -FLTPDEKYGMIEQV---MVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAAS-LQR 685
+ ++ G+++ + + V N+VG+++N A + LQ++SGL +A L
Sbjct: 749 LYQHDVDRKGLVQAIGESIEKVVNRVGVNLNTA-----SLSLLQYVSGLDAGRARKILAY 803
Query: 686 SLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
+ G I R + G+G K F A GFLRV G+ LD T IHPESY
Sbjct: 804 RQQKPGPIANRAELRNVSGIGAKTFEQAAGFLRVYHRGEGKEP------LDATSIHPESY 857
Query: 746 GLAQELAKEVYNRDIEGD 763
G +L RD+E D
Sbjct: 858 GKTYKLLVTRALRDVESD 875
>gi|423556766|ref|ZP_17533069.1| hypothetical protein II3_01971 [Bacillus cereus MC67]
gi|401194081|gb|EJR01073.1| hypothetical protein II3_01971 [Bacillus cereus MC67]
Length = 722
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 203/499 (40%), Gaps = 76/499 (15%)
Query: 255 KETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
KE P E A F A S++ LQGA+ + A +S R ++R+ ++S+
Sbjct: 139 KENPAEKAMEFVNAEKEVASAEDALQGAQDIIAELVSDNAAYRSWIRNTTFRQGIMSSSV 198
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLF 372
+ + + G E+PL+K + L + + E+E +L+V++ P + ++
Sbjct: 199 KDKEKDEKNIYEMYYGY----EEPLQKVVPHRVLAMNRGEKEDVLRVSVITP---IEEIL 251
Query: 373 SDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYG 432
+ + D SKSA +L ++D + PS+ +E R + A+ + +
Sbjct: 252 QFLHKKMILDEASKSAHYV----QLAMEDGYKRLIQPSIEREIRKELMETAEEQAIHIFS 307
Query: 433 KALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFT 490
+ L N + P + K V+ + ++D +G+V +DV++
Sbjct: 308 ENLRNLLLQPPMKGK-------------VVLAVDPAYRTGCKLAVVDDTGKVLHIDVIYP 354
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
VR + K ++L + ++ ++ +G S + E I +++
Sbjct: 355 ------HPPVRKYEDAKT---KILSIIDKYEVEMIAIGNGTASRET-----EEFIVDVLQ 400
Query: 551 EHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMV 610
RDV + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA +
Sbjct: 401 NVERDVFY-------IIVNEAGASVYSASDVAREEFPNLQVEERSAVSIGRRLQDPLAEL 453
Query: 611 ATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQF 666
+ G G+ L LT V+ N+VG+++N A
Sbjct: 454 VKIDPKSVGVGQYQHDVSQKRLNESLT---------FVVETAVNRVGVNVNTA-----SV 499
Query: 667 APLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAA 726
A LQ++SGL A ++ G R + LG K + +GFLR+
Sbjct: 500 ALLQYVSGLSKTVAKNIVAKREEDGKFTKRTELKKIPRLGAKTYEQCIGFLRILEGANP- 558
Query: 727 SSSQFIDLLDDTRIHPESY 745
LD T IHPE Y
Sbjct: 559 --------LDRTGIHPEQY 569
>gi|344202957|ref|YP_004788100.1| competence protein ComEA [Muricauda ruestringensis DSM 13258]
gi|343954879|gb|AEM70678.1| competence protein ComEA helix-hairpin-helix repeat protein
[Muricauda ruestringensis DSM 13258]
Length = 710
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 198/490 (40%), Gaps = 87/490 (17%)
Query: 277 LQGARHMAAVEISCEPCVRKYVRSIFMDNAVVST--CPTPDGDSAIDSFHQFAGVKWLRE 334
L+GARH+ + I+ +R +R +A+++T T D F + W
Sbjct: 154 LEGARHIISEWINERTDIRNQLRGQLERHALITTKVVKTKKDDEKAQKFRDY--FDW--S 209
Query: 335 KPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQ 394
+PL + ++L I +AE+E ++V I++ + + + + + KS Q
Sbjct: 210 EPLNRCPSHRFLAIMRAEKEGFIRVKIEIDNE---RALQNIERRLI-----KSNNACAKQ 261
Query: 395 RELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPD 454
+L + DA LLPS+ E A + + + K L + P K
Sbjct: 262 IKLAIADAYKRLLLPSLSNELLKTAKENADASAIQVFSKNLKQLLLGAPLGEK------- 314
Query: 455 EEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERL 513
R+LA PG + V LD G++ K N+
Sbjct: 315 -----RILAI--DPGFRTGCKVVCLDEQGDL---------------------KHNET--- 343
Query: 514 LKFMMDHQPHVVVLGAVNLSCTSLKDDIYEI---------IFKMVEEHPRDVGHEMDELS 564
+ H P GA+ +SL D Y+I + E+ + + + E+
Sbjct: 344 ---IYPHPPQRDSSGAIK-KISSLVD-AYKIEAIAIGNGTASRETEQLVKRIPFK-KEIE 397
Query: 565 IVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWK 624
+ E+ +Y S+I+ D+ P V+ AV++GR L +PLA + + + S
Sbjct: 398 VFVVSEAGASIYSASKIARDEFPNYDVTVRGAVSIGRRLADPLAELVKI-----DAKSIG 452
Query: 625 LCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQ 684
+ ++ + + ++ V+ N VG++IN A L ++SG+GP+ A ++
Sbjct: 453 VGQYQHDVDQTQLKTSLDTVVESCVNSVGVNINTA-----SVPLLSYVSGIGPKLAENIV 507
Query: 685 RSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPES 744
G R+ LG K F + GFLR++ LDD+ +HPES
Sbjct: 508 AYRNENGKFKNREQIKKVARLGGKAFEQSAGFLRIKNGDNP---------LDDSAVHPES 558
Query: 745 YGLAQELAKE 754
YGL ++AK+
Sbjct: 559 YGLVAKMAKD 568
>gi|339500988|ref|YP_004699023.1| Tex-like protein [Spirochaeta caldaria DSM 7334]
gi|338835337|gb|AEJ20515.1| Tex-like protein [Spirochaeta caldaria DSM 7334]
Length = 819
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 150/693 (21%), Positives = 275/693 (39%), Gaps = 168/693 (24%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE+ SL +EV + ++D ++ +
Sbjct: 46 VPFIARYRKEKTGSL------DEVQ---------------------VREIDHRFTSGKNL 78
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+S R E R I+++ +L + L+++I+K A T E++D+ +
Sbjct: 79 ES--------RRIEIIRGIFEQGKL--TEALYENITK----AATLTELEDI-------YA 117
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQL---SLEKMGDEL-- 251
P YKR K+ T+ + GL +A Q ++L +L K +
Sbjct: 118 P---------YKR-KKKTRGMIAQEKGLEPLA--------QAMMELDAAALRKKAEAFVR 159
Query: 252 EDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC 311
EDP E PE ++ A LQGA + A +++ +P R ++ ++ + +
Sbjct: 160 EDP-EHPELSVASIDDA--------LQGAMDIIAEQVAQDPDNRSDIKKFYLSDGRIIVK 210
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
D + S +Q W + L + + + L I + E E L+VTI + E++ +L
Sbjct: 211 GIGDEEKKKTSTYQMY---WDYTEQLSQIKPHRVLAINRGEREGELEVTIDVDENTATEL 267
Query: 372 FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEY 431
+ + ND + ++D L L P++++E R S A + +
Sbjct: 268 LQ------------RKYTIHNDYHKTAIEDGLKRLLSPAVIRELRGDQSDAADDHGISVF 315
Query: 432 GKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFT 490
+ L N + P + RVL PG + T LD +G+ +
Sbjct: 316 SQNLKNLLMQQPIK------------GTRVLGI--DPGIRTGTKCAALDETGK-----YL 356
Query: 491 GCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVE 550
G + Q + + LL+ + + ++ +G S ++ E++ + +
Sbjct: 357 GSFVIY------QHHPEEAKRALLEGIKSYNVQLIAVGNGTGS-----HEVQELVAQTIS 405
Query: 551 EHPRDVGHEMDELSIVYG--DESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
E + L ++Y DE +Y S I+ ++ P ++ A+++GR LQ+PLA
Sbjct: 406 E---------NHLEVLYTVVDEDGASVYSASDIAREEFPDLDLTIRGAISIGRRLQDPLA 456
Query: 609 MVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+ + G G L L + + + T V L
Sbjct: 457 ELVKIDPKSIGVGLYQHDVNQKKLSETLDEVVQSVVNNVGVNLNTASVSL---------- 506
Query: 665 QFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
L+++SG+ A L + G I +RK+ + G+G K F GFL++ S
Sbjct: 507 ----LKYVSGINGSLAKKLVKYREERGKITSRKELMDVPGMGPKSFEQCAGFLKIPESS- 561
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQELAKEVYN 757
D LD+T +HPE+Y E+A+E+Y+
Sbjct: 562 --------DPLDNTWVHPENY----EIAREIYD 582
>gi|54298824|ref|YP_125193.1| hypothetical protein lpp2891 [Legionella pneumophila str. Paris]
gi|53752609|emb|CAH14044.1| hypothetical protein lpp2891 [Legionella pneumophila str. Paris]
Length = 789
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 136/637 (21%), Positives = 262/637 (41%), Gaps = 103/637 (16%)
Query: 133 LQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
+Q R A + Y + +E I R ++L + +S+ AAET+ ++D+ L +
Sbjct: 53 VQLRFLAERLIYLRELDERRTVILQSIRE--QEKLTPELEQSILAAETKTRLEDLYLPY- 109
Query: 193 LHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDEL- 251
RPKR TK Q+ ++ LE + L
Sbjct: 110 ----------------RPKRRTK--------------------AQIAIEAGLEPLAHALW 133
Query: 252 EDPKETPEEMASNF--KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
+DP PEE AS F A ++QA L GARH+ + + + +R + +V
Sbjct: 134 KDPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELINELREYLWQHGIVK 193
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
+ + F + + + ++K + L + + E +LQV++ LP
Sbjct: 194 SVGNSTKKDQANKFSDY----FDYSEAIKKIPSHRALALFRGRREGILQVSLVLP----- 244
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
D Y + V+ + + QR+ D +L+ + V+ + L+
Sbjct: 245 ----DQDASYGENKVAAYFNITDKQRKA------DGWLIDT-VRMTWKIKLFTKLELELL 293
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVL 488
+ + ++ ++ + + D+ A P+V PG + V++D++G+++D
Sbjct: 294 TRLREIADEEAIKVFSKNLRDLLLAAPAGPQV-TIGLDPGIRTGVKVVVVDATGKLLD-- 350
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
++ QN Q L K +Q +++ +G N + + + + + KM
Sbjct: 351 YSVIFPFAPQNEWHQSIAD-----LAKLAAKYQVNLISIG--NGTGSRETERLVADLIKM 403
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
+ +L+ + E+ +Y S I++++ P +++ AV++ R LQ+PLA
Sbjct: 404 YPDL---------KLTKIIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLA 454
Query: 609 MVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAP 668
+ + E S + ++ + + ++ V+ D N VG+DIN A A
Sbjct: 455 ELVKI-----EAKSIGVGQYQHDVNQAKLARCLDGVVEDCVNAVGVDINTA-----SAAL 504
Query: 669 LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASS 728
L ISGL A ++ + GA R + +G+K F A GFLR+ A
Sbjct: 505 LSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKNINRMGEKAFQQAAGFLRIMNGDNA--- 561
Query: 729 SQFIDLLDDTRIHPESYGLAQELA--KEVYNRDIEGD 763
LD + +HPE+Y L +++ K+V ++I G+
Sbjct: 562 ------LDASCVHPEAYPLVEKIISDKKVSIKEIIGN 592
>gi|134298988|ref|YP_001112484.1| RNA-binding S1 domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134051688|gb|ABO49659.1| RNA binding S1 domain protein [Desulfotomaculum reducens MI-1]
Length = 724
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 129/595 (21%), Positives = 247/595 (41%), Gaps = 100/595 (16%)
Query: 206 QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNF 265
Q RPKR T+ S + GL +A ++ G+Q P E A+ +
Sbjct: 106 QPYRPKRKTRASVARERGLEPLAQWLFMATS--GVQ----------------PLEEATKY 147
Query: 266 KCAMF--NSSQAVLQGARHMAAVEISCEPCVRKYVRSI-FMDNAVVSTCPTPDGDSAIDS 322
N ++ LQGA + A IS +P R ++R + +V+ + D
Sbjct: 148 LNPEIGVNCAEEALQGAMDIIAETISDDPDTRGWLRGFTYQRGELVTEVKNQEADQ---- 203
Query: 323 FHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLS- 381
+ + +P++ + L I + E+E++L+V I++ E+++ + ++S
Sbjct: 204 -RGVYRMYYEHREPVKTVPPHRVLAINRGEKEEILKVKIEVSEETV---MENLNRRWISM 259
Query: 382 -DGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVS 440
GV + Q ++D L P++ ++ R+ ++ A+ + + K L +
Sbjct: 260 KSGVGEILQEA-------IRDGYRRLLAPAVERDIRNQLTESAEEQAISVFSKNLKQLLL 312
Query: 441 VGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNV 500
P + K I + A R C W ++D++G++++V G +
Sbjct: 313 QPPVKDK---IVLGLDPAYRT-GCKWA---------VVDNTGKLLEV---GVIYPTPPQK 356
Query: 501 RDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEM 560
+ Q+++ + K+ +D ++ +G S + + V E +D G +
Sbjct: 357 KIQEARAEISRLVDKYEID----IIAIGNGTASRET---------EQFVAELIQDKGWQ- 402
Query: 561 DELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREI 620
+L + +E+ +Y S +++ + PG + AV++GR LQ+PLA + + E
Sbjct: 403 -KLQYIIVNEAGASVYSASELAAKEFPGLDVAQRSAVSIGRRLQDPLAELVKI-----EP 456
Query: 621 LSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKA 680
S + ++ + P ++ V+ N VG+D+N A + L ++SG+ A
Sbjct: 457 RSIGVGQYQHDVAPKRLEESLKGVVESAVNMVGVDLNTA-----SASLLSYVSGINSTVA 511
Query: 681 ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRI 740
++ G R LG K F +VGFLR+ A LD T I
Sbjct: 512 NNIVHYREENGKFIERTQLKKVPRLGPKAFEQSVGFLRIMDGSNA---------LDKTGI 562
Query: 741 HPESYGLAQELAKEVYN--RDI----------EGDLNDDEDALEMAIEHVRDRPD 783
H ESY + ++L KE+ + RDI + D+ + LE + +RD D
Sbjct: 563 HTESYPVVKKLLKEISSSERDIGSSELKEKLKQLDMEKTAERLETGVPTLRDIID 617
>gi|429756351|ref|ZP_19288947.1| Tex-like protein [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429171438|gb|EKY13061.1| Tex-like protein [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 707
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 135/623 (21%), Positives = 258/623 (41%), Gaps = 99/623 (15%)
Query: 144 YKKRYEEESRRIYDET---RLALNQQLFDSISKSLEAAETERE-----VDDVDLKFNLHF 195
+ RY ++S + DE +A +Q +D+I K E + E DD+ + F
Sbjct: 33 FIARYRKDSTQNLDEVAIEHIAKSQADYDNICKRKETILSSIEEQGKLTDDLRKRIENSF 92
Query: 196 PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPK 255
E+ YK+ +R TK + GL E L Q+ +++ D
Sbjct: 93 EINELEDLYLPYKK-RRKTKADVAKENGL-----------EPLAKQIMSQRITD------ 134
Query: 256 ETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPD 315
E +A + + + LQGA + A I+ +R+ +R IF A++S+
Sbjct: 135 --LELLAGRYLSDKVPTEEDALQGASDIIAEWINENTFIRRTLRRIFQRKAIISS-EVAK 191
Query: 316 GDSAIDSFHQFAG-VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
G + + ++A W E+ L K + L + +AE+E +++ +++ DS L
Sbjct: 192 GKNEEEEAQKYAQYFDW--EEALNKAPSHRVLAMLRAEKEGFVKLKVQV--DSEETL--- 244
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
++ + + KS D + +KD+ L PS+ E +A + + + +
Sbjct: 245 ---PFMEENIIKSRGEVADFLKKTVKDSYKRLLEPSISNETLQEAKDKADAKAISVFAEN 301
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVV--DVLFTG 491
L + P K R+LA PG + V LD G+++ DV++
Sbjct: 302 LSQLLLASPLGEK------------RILAI--DPGYRTGCKVVCLDEKGDLLHHDVIYP- 346
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
+ +ND M + ++ N+ S+ + + E
Sbjct: 347 ------------HAPQND------MTMATKKLSTMVSQYNIQAISIGNGTAS---RETES 385
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
R + +++ + E+ +Y S+I+ D+ P V+ AV++GR L +PLA +
Sbjct: 386 FVRSIAFP-EKVEVFVVSEAGASVYSASKIARDEFPDYDVTVRGAVSIGRRLADPLAELV 444
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+ + ++ ++ L + ++ +V N+VG+++N A + L +
Sbjct: 445 KIDPKSIGVGQYQHDVNQSLLKEE-----LDATVVRCVNKVGVNLNTASK-----SLLSY 494
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+SG+G + A ++ GA R+D LG KV+ AV FLRV S
Sbjct: 495 VSGIGEKMAENIVAYRSANGAFSKREDLKKVPRLGDKVYQQAVAFLRVHNSENP------ 548
Query: 732 IDLLDDTRIHPESYGLAQELAKE 754
LD++ +HPE+Y + +++AK+
Sbjct: 549 ---LDNSAVHPEAYPIIKQMAKD 568
>gi|219667445|ref|YP_002457880.1| RNA binding S1 domain-containing protein [Desulfitobacterium
hafniense DCB-2]
gi|219537705|gb|ACL19444.1| RNA binding S1 domain protein [Desulfitobacterium hafniense DCB-2]
Length = 721
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 106/508 (20%), Positives = 221/508 (43%), Gaps = 84/508 (16%)
Query: 254 PKETPEEMASNFKCAMF--NSSQAVLQGARHMAAVEISCEPCVRKYVR-SIFMDNAVVST 310
PK P E A + +S+ + GA + A IS + +RK +R + F + ++
Sbjct: 132 PKAQPLEEAQKYINPELGVETSEEAISGASDILAEMISDDAAMRKRIREATFRFGDIAAS 191
Query: 311 CPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNK 370
+ S + ++ + +P++K + L + + E+E++L V + +P + +
Sbjct: 192 AKKAEERSPYEMYYDY-------REPVKKLPPHRILALNRGEKEEVLSVKVDVPTE---R 241
Query: 371 LFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLME 430
+ + ++ Y+ G +A++ + + D+ + PS+ +E R ++ +A+ +
Sbjct: 242 MLALLEQAYVKHG--PAAEIVRNAAD----DSYKRLIAPSIEREIRGALTEKAEEQAIKV 295
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLF 489
+ + L + P + K + PG + F ++D +G++ V
Sbjct: 296 FAENLKQLLLQPPVRGK--------------VVLGLDPGFRTGCKFAVVDDTGKLFHV-- 339
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMV 549
G + + +++KK ++ + K+ Q V+ +G S + E+ +M+
Sbjct: 340 -GVIYPHPPQNKREEAKKVLRDTIAKY----QVEVIAIGNGTAS-----RETEEVTAEMI 389
Query: 550 EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAM 609
E D+ E + E+ +Y S+++ ++ P +++ AV++ R LQ+PLA
Sbjct: 390 RES--DLASEY-----IIVSEAGASVYSASKLAGEEFPDFDLSLRSAVSIARRLQDPLAE 442
Query: 610 VATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
+ + G G+ + LE L +G++E + N VG+D+N A
Sbjct: 443 LVKIEPKAVGVGQYQHDVQPKRLEESL-----HGVVESAV----NAVGVDLNTA------ 487
Query: 666 FAP--LQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 723
+P LQ+++GL P A ++ G R+ LG++ FV GF+R+
Sbjct: 488 -SPSLLQYVAGLKPTIAKNIVAFRESNGKFQKREQLKKVPRLGEQTFVQCAGFIRIPEGA 546
Query: 724 QAASSSQFIDLLDDTRIHPESYGLAQEL 751
L++T +HPESY LAQ +
Sbjct: 547 NP---------LENTPVHPESYELAQNI 565
>gi|393223979|gb|EJD32583.1| hypothetical protein AURDEDRAFT_77586, partial [Auricularia
delicata TFB-10046 SS5]
Length = 277
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 19/252 (7%)
Query: 120 LWAIHDLDKKWLLLQKRKSALQSYYKK------RYEEESRRIYDETRLALNQQLFDSISK 173
LW ++ L +K+ L +RK L+S Y++ YE E R D L + ++
Sbjct: 37 LWQVYVLAQKYRALVERKRGLESLYERLAVSDGYYEGEIRPRLDSLALVADT------TE 90
Query: 174 SLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGY 233
L R+ D +F L F + V E ++K P R++ Y K + ++A +G
Sbjct: 91 WLSLKYRHRKKD----QFTLEFHDDDAPV-EKKHKAPSRASAYEIVKKTIVAKLAEGYGL 145
Query: 234 SSEQLGLQLSLEKMGDELEDPKETPEEMA-SNFKCAMFNSSQAVLQGARHMAAVEISCEP 292
S+E + L ++D + P E A + A + L AR + A E+ +P
Sbjct: 146 SAESVVLNFLASTRQHFVDDQEAPPLEYAEQSIDPAAAADPKDQLAKARMILATELGKDP 205
Query: 293 CVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPL-RKFEDAQWLLIQKA 351
+R+ R+ F AV+S PT G + ID FH + K+L++KP+ +Q L I +A
Sbjct: 206 LLRQEARTHFKSFAVLSVIPTEKGIAKIDEFHPYYAFKYLKDKPISMMLRSSQLLHILRA 265
Query: 352 EEEKLLQVTIKL 363
E + L+ V I L
Sbjct: 266 ESDHLVTVDIHL 277
>gi|456062949|ref|YP_007501919.1| RNA-binding S1 domain-containing protein [beta proteobacterium CB]
gi|455440246|gb|AGG33184.1| RNA-binding S1 domain-containing protein [beta proteobacterium CB]
Length = 786
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 125/549 (22%), Positives = 226/549 (41%), Gaps = 80/549 (14%)
Query: 237 QLGLQLSLEKMG-DELEDPKETPEEMASNFKCAMFNSSQ----------AVLQGARHMAA 285
Q+ L+ LE + D L +P TPE A + F S Q A L+GAR +
Sbjct: 115 QIALEAGLEPLANDLLSNPMLTPEAEAVQYLKEAFTSDQGDNPGVVDVKAALEGARQILM 174
Query: 286 VEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQW 345
+ + + + +R+ ++ VV + + + F + + +P+ +
Sbjct: 175 ERFAEDAGLVQSLRTYLQEHGVVESKVIAGKEQEGEKFADY----FDYSEPISAIPSHRA 230
Query: 346 LLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDN 405
L + + E++L V ++L + K D + ++ ++ N+ R D
Sbjct: 231 LALFRGRREQMLMVNLRLDTEE-EKPRWDAPHNPCESRIANQFKIKNEGR------PADQ 283
Query: 406 FLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKV---SVGPYQRKDNDITPDEEAAPRVL 462
+L ++ R S +S L+ AL + ++ + R D+ A P+V
Sbjct: 284 WLAETVRWTWRIKCSMHLESELM----SALRERSEIEAINVFARNLKDLLLAAPAGPKV- 338
Query: 463 ACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQE----RLLKFM 517
PG + ++D++G+VVD +V KND E L K
Sbjct: 339 TIGLDPGMRTGVKVAVVDATGKVVDT-----------DVIYPHQPKNDWEASLHTLAKLA 387
Query: 518 MDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYE 577
HQ ++ +G N + + D + + + K E +L+ + E+ +Y
Sbjct: 388 EKHQATLISIG--NGTASRETDKLAQDLIKAKPEL---------KLTKIVVSEAGASVYS 436
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
S +S +LPG +++ AV++ R LQ+PLA + + + ++ ++ L
Sbjct: 437 ASEYASKELPGMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVMQTQLAKS-- 494
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAP-LQFISGLGPRKAASLQRSLVRAGAIFTR 696
+ V+ D N VG+D+N A AP L +SGL A + GA TR
Sbjct: 495 ---LVAVVEDCVNAVGVDVNTA------SAPLLARVSGLSSTVAEGIVSYRDSNGAFQTR 545
Query: 697 KDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY 756
D + LG+K F A GFLR+ D LD + +HPESY L +++ K++
Sbjct: 546 ADLRSVPRLGEKTFEQAAGFLRIMNG---------TDPLDASAVHPESYPLVEKILKDIK 596
Query: 757 N--RDIEGD 763
+++ GD
Sbjct: 597 KGVKEVIGD 605
>gi|416998508|ref|ZP_11939269.1| Tex-like protein N-terminal domain protein [Veillonella parvula
ACS-068-V-Sch12]
gi|333977406|gb|EGL78264.1| Tex-like protein N-terminal domain protein [Veillonella parvula
ACS-068-V-Sch12]
Length = 766
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 156/775 (20%), Positives = 308/775 (39%), Gaps = 132/775 (17%)
Query: 151 ESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRP 210
E+RR + +++ D + KSLEAA +E++D+ L + RP
Sbjct: 62 ETRRQEIIASITEQEKMTDELMKSLEAATKLQELEDLYLPY-----------------RP 104
Query: 211 KRSTKYSSCSKAGLWEVASKFGYSSEQLG--LQLSLEKMGDELEDPKETPEEMASNFKCA 268
K+ T+ + GL +A + G L+++ E + +E+ P++
Sbjct: 105 KKRTRAMIARERGLEPLADMIINDTVISGDPLEIAKEYITEEVPTPEDA----------- 153
Query: 269 MFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAG 328
+QGA + A +S R Y+R + + + F Q+A
Sbjct: 154 --------IQGASDIVAEIVSDSADFRAYLRKKMWNEGFIQ-AELSGEEEEQQQFLQYAE 204
Query: 329 VKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSA 388
+P+R+ + L + + E+ L++ + +P D+ Y+ + K+
Sbjct: 205 YA----EPVRQMPSHRILAVNRGEKLGALKLALTVPGDTYIA--------YMLQKLEKNP 252
Query: 389 Q-LWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRK 447
+ ++ + + + DA + P++ +E R+ ++ +A + +G L N + P
Sbjct: 253 KSIFAEYKAAAVADAYKRLIFPALEREIRNELTEKADEQAIKVFGVNLKNLLLQPPL--- 309
Query: 448 DNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSK 506
A V+ PG + ++D G V+D G L + ++++
Sbjct: 310 ----------AGHVI-MGLDPGYRTGCKMAIIDQQGNVLDY---GAYYLTNSEKLRKEAQ 355
Query: 507 KNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
K +++ +F V L ++ S + + + M+EE D + +
Sbjct: 356 KVLADKIRRFK-------VTLLSIGNGTASYETE--QFASTMIEEEKLDCHY-------I 399
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
+E+ +Y S+++ D+LP ++ AV++ R +Q+PLA + + S +
Sbjct: 400 ITNEAGASVYSASKLAIDELPDLDVTIRGAVSIARRVQDPLAESVKI-----DPKSIGVG 454
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
++ + + ++QV+ V N VG+ +N A A LQ ++G+ A ++
Sbjct: 455 QYQHDVNQKQLTHTLDQVVETVVNHVGVKLNTA-----SPAILQHVAGISSAVAKNIVAY 509
Query: 687 LVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG 746
G +RK+ + LG F GFLR++ LD+T +HPESY
Sbjct: 510 RQENGVFKSRKELLKVPRLGPAAFTQCAGFLRLQHGKNP---------LDNTSVHPESYE 560
Query: 747 LAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL----LKTYLLDRHIKEKKRENK 802
LA+ + E L ++ ++D+ L +K L+D K +
Sbjct: 561 LAERIIGE----------------LGFTLKDLQDKSQLEALQVKLPLVDADKMAAKLDAG 604
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
T+ I L +D R P + +++S E + G VV+ TV V A
Sbjct: 605 VPTVRDILAALAKPGRDPREDLPAPLTRK--HVVSLE---DIKVGTVVKGTVHNVVDFGA 659
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCR 917
G+L + + + + SD L GDI+ +I S+ R ++ L +
Sbjct: 660 FVDFGLKTNGLLHRSELCNSRQHP--SDVLAVGDIIEAQIISVDVKRNRIGLSVK 712
>gi|195158238|ref|XP_002019999.1| GL13731 [Drosophila persimilis]
gi|194116768|gb|EDW38811.1| GL13731 [Drosophila persimilis]
Length = 894
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 178/415 (42%), Gaps = 52/415 (12%)
Query: 344 QWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDAL 403
Q L I +AE+ K L V + + L E Y+S G+ + R L ++ +
Sbjct: 372 QMLAINRAEKHKFLSVKMDTNDYLKRDLSRFISEQYMSQGLQYPLRRETFNRAL--EECI 429
Query: 404 DNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLA 463
L P M ++ R+ + +A+ + + K L + + P + R+L
Sbjct: 430 TKKLQPLMCRQIRADLKEKAQKAAIDVFAKNLKQLLLISPLK------------GERILG 477
Query: 464 CCWGPGKPETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPH 523
PG T L E DVL TG + + +K+ +++L++ + H
Sbjct: 478 --IDPGF--TNGCKLAIISETADVLDTGVIYPHGA----RANKRAAEQKLVELLSKHTCQ 529
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHE--MDELSIVYG--DESLPRLYENS 579
V+ LG + T+ ++ + + D+ H +D SI Y +E+ +Y S
Sbjct: 530 VIALG----NGTACRETEFWLT---------DLFHAGILDSRSIRYSIVNENGASVYSCS 576
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
++S + P N + AV++ R L +PL+ + + ++ E LT
Sbjct: 577 DVASKEFPTMDTNERSAVSIARRLNDPLSEYVKIEPRHLGVGMYQHDVSEKTLTES---- 632
Query: 640 MIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDF 699
++ V+ + + VG+D+N A + L+ I+GL +KA + G +RKD
Sbjct: 633 -LKDVVSECVSYVGVDLNTA-----SLSVLKHIAGLSEKKAEKIIEYRTAKGPFQSRKDL 686
Query: 700 VTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKE 754
++ +G+K FV GF+R+ + + + LD T +HPESY +A+ + E
Sbjct: 687 LSVRTIGEKSFVQCAGFVRIE---PLSVGGRLKNPLDCTWVHPESYKVAETILGE 738
>gi|30018504|ref|NP_830135.1| transcription accessory protein [Bacillus cereus ATCC 14579]
gi|29894044|gb|AAP07336.1| Transcription accessory protein (S1 RNA binding domain) [Bacillus
cereus ATCC 14579]
Length = 724
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 154/683 (22%), Positives = 267/683 (39%), Gaps = 149/683 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE SL +EV RT +W ++ L+ R
Sbjct: 40 VPFIARYRKEWTGSL------DEVQI-------RTILERWQYMMQ-----------LEDR 75
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
K EE R+ DE + L ++L I K+ + E E +L+ P
Sbjct: 76 K------------EEVLRLIDE-KGKLTEELRQQIVKATKLQEVE----------DLYRP 112
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
E KR TK + + GL +A LS +K EDP +
Sbjct: 113 YKE-----------KRRTKATVAKEKGLEPLAEWL----------LSYKK-----EDPAK 146
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
E + K S++ LQGA+ + A +S E R ++R++ V+S+ +
Sbjct: 147 KAVEFINVEKEV--QSAEEALQGAQDIIAEMVSDEAAYRSWIRNVTFRKGVMSSSVKDEE 204
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
+ + + + E+PL+K + L + + E+E +L+V + P D + +
Sbjct: 205 KDEKNIYEMY----YSYEEPLQKVVPHRVLAMNRGEKEDILRVAVVPPVDEIVTFLN--- 257
Query: 377 EHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALW 436
+ + D SKSA +L ++D + S+ +E R ++ A+ + + + L
Sbjct: 258 KKVIRDNDSKSAHYV----QLAIEDGYKRLIQSSIEREIRKELTETAEEQAIHIFSENLR 313
Query: 437 NKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFTGCLT 494
N + P + K V+ + ++D +G+V +DV++
Sbjct: 314 NLLLQPPMKGK-------------VVLAVDPAYRTGCKLSVVDDTGKVLHIDVIYP---- 356
Query: 495 LRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPR 554
VR K ++L + +Q ++ +G S + E I +++ R
Sbjct: 357 --HPPVRKYDDAKT---KVLSIIDKYQVEMIAIGNGTASRET-----EEFIVDVLQSVNR 406
Query: 555 DVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATL- 613
DV + + +E+ +Y S ++ ++ P + + AV++GR LQ+PLA + +
Sbjct: 407 DVFY-------IIVNEAGASVYSASDLAREEFPNLQVEERSAVSIGRRLQDPLAELVKID 459
Query: 614 ---CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQ 670
G G+ L LT V+ NQVG+++N A A LQ
Sbjct: 460 PKSVGVGQYQHDVSQKRLNESLTF---------VVETAVNQVGVNVNTA-----SVALLQ 505
Query: 671 FISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQ 730
++SGL A ++ G R + LG K + +GFLR+
Sbjct: 506 YVSGLSKTVAKNIVAKREEDGKFTKRTELKKIPRLGAKTYEQCIGFLRILEGANP----- 560
Query: 731 FIDLLDDTRIHPESYGLAQELAK 753
LD T IHPE Y + L K
Sbjct: 561 ----LDRTGIHPEQYKNVELLLK 579
>gi|307179348|gb|EFN67712.1| S1 RNA-binding domain-containing protein 1 [Camponotus floridanus]
Length = 822
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 130/579 (22%), Positives = 240/579 (41%), Gaps = 84/579 (14%)
Query: 205 GQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQL----GLQLSLEKMGDE-LEDPKETPE 259
G++ ST S+ S A L ++ + + +S++L +L LE + + L K TP
Sbjct: 155 GKWSPEIHSTIMSTKSLADLEDIYALYKPTSKRLLAERAKELGLENISNAVLHGQKITPL 214
Query: 260 EMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAV---VSTCPTPDG 316
N + + Q V G H+ A I+ + V V S+ + + S C T
Sbjct: 215 VSLVNKEKEGLRNEQQVRDGIIHIIADVITKDKEVFDKVTSLRKKSTIYIETSQCKTTKV 274
Query: 317 DSAID--SFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSD 374
++ + + K RE +R Q L I +AE +K++ V + +P+ +
Sbjct: 275 SENVNEHKYKYYFNFKS-REDIIRP---NQILAINRAESQKIISVKVIVPDTFEHTFKKF 330
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALD----NFLLPSMVKEARSLMSGRAKSWLLME 430
C Y + + + +L D +L D +D + P +V+ RS M RA+ +
Sbjct: 331 CLSQY-TYRMGSATKLHQD----LLSDGIDYAYKKLIKPQVVRRVRSEMKERAEKAAIQV 385
Query: 431 YGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE-TTFVMLDSSGEVVDVLF 489
+ + + P + + + PG ++ G +++
Sbjct: 386 FATNVKQLLLTSPVRGE--------------IILGIDPGFYHGCKLAVISEHGNILE--- 428
Query: 490 TGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII-FKM 548
T +++ S + + ++K + ++ V+ LG C + + +II KM
Sbjct: 429 ----TTVIHPHKNELSFRIAADSMVKLVNKYKCTVLALGN-GTGCRKTESFLTKIIQSKM 483
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
+ P DV + +IV DES +Y S + + P N+ A+++ R LQ+PLA
Sbjct: 484 FD--PLDVKY-----TIV--DESGASIYSCSSEAQSEFPNFDPNLVSAISIARRLQDPLA 534
Query: 609 MVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+ + G G ++ L + +++V+ + + VG+D+N A
Sbjct: 535 ELVKIEPKHLGVGM---------YQHDLPEKQLMNTLDEVVTEAVSFVGVDVNTASQ--- 582
Query: 665 QFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
L+ I+GL +A S+ ++ GA R+ + G+GKK F GF+R+R
Sbjct: 583 --CLLRRIAGLTNSRATSIIEWRIKHGAFRNREQLLDVKGIGKKTFEQCAGFIRIRPETA 640
Query: 725 AAS----------SSQFIDLLDDTRIHPESYGLAQELAK 753
S S ++LLD T IHPESYG+A + +
Sbjct: 641 IISLQTTTKDNKKSKSDLNLLDQTWIHPESYGIANKFLR 679
>gi|260888130|ref|ZP_05899393.1| protein YhgF [Selenomonas sputigena ATCC 35185]
gi|330840001|ref|YP_004414581.1| Tex-like protein [Selenomonas sputigena ATCC 35185]
gi|260862159|gb|EEX76659.1| protein YhgF [Selenomonas sputigena ATCC 35185]
gi|329747765|gb|AEC01122.1| Tex-like protein [Selenomonas sputigena ATCC 35185]
Length = 727
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 211/507 (41%), Gaps = 76/507 (14%)
Query: 252 EDPKETPEEMASNFKCAM--FNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVS 309
E+ T EE A+ F A +++ L GA + A +S +R+ +R A +
Sbjct: 134 EEKSGTAEEYAAQFIDAEKGVETAEDALSGAMDIVAETVSEGAALRRKMRKELWQRAELV 193
Query: 310 TCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLN 369
T + + A +F + K +PLR + L I + E++ L+VT++ + L
Sbjct: 194 TALDEEAEDA-QTFLMYQDYK----EPLRTLPSHRILAINRGEKKGCLKVTLQCDHEKLA 248
Query: 370 KLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLM 429
+ DG++K ++ + + ++D L P+M +E R+L++ A+ +
Sbjct: 249 A--------EIFDGLAKGDSIFRELLKEAIEDGYKRLLFPAMERELRALLTENAEKQAIH 300
Query: 430 EYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG-KPETTFVMLDSSGEVVDVL 488
+G L + P A V+ PG + ++ +G+VVD
Sbjct: 301 VFGANLKQLLLEAPL------------AGHTVMG--LDPGYRTGCKMAVVSPTGQVVD-- 344
Query: 489 FTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKM 548
G L L R ++ K ++L + H ++ +G S + E +
Sbjct: 345 -HGVLYLTMSEERRAEAAK----KVLALIKKHGVTLISIGNGTASY-----ETEEFTASL 394
Query: 549 VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLA 608
+ E+ V + + +E+ +Y S+++ ++LP ++ AV++ R +Q+PLA
Sbjct: 395 IRENKLPVHY-------LITNEAGASVYSASKLAKEELPEYDVTIRGAVSIARRVQDPLA 447
Query: 609 MVATL----CGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREW 664
+ + G G+ ++ + E ++ V+ N VG+++N A
Sbjct: 448 ELVKIDPQAIGVGQ---------YQHDVNQKELAAALDAVVESAVNHVGVNLNTA----- 493
Query: 665 QFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
A L I+G+ A ++ G +R+ + LG F GFLR+
Sbjct: 494 SAALLSHIAGVTKAIAKNIVDWRNENGIFASRRQLLKVPRLGPAAFTQCAGFLRI----- 548
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQEL 751
A S LD+T +HPESY LA++L
Sbjct: 549 AGGKSP----LDNTPVHPESYALAEKL 571
>gi|330508304|ref|YP_004384732.1| S1 RNA binding domain-containing protein [Methanosaeta concilii
GP6]
gi|328929112|gb|AEB68914.1| S1 RNA binding domain protein [Methanosaeta concilii GP6]
Length = 713
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 563 LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILS 622
+SIV +ES +Y S + + P Q V+ AV++GR LQ+PLA + + E +
Sbjct: 401 ISIVPVNESGASVYSTSARARSEFPDQDATVRGAVSIGRRLQDPLAELVKI-----EPQA 455
Query: 623 WKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAAS 682
+ ++ + P ++ V+ NQVG+D+N A L +SGLGP+ A +
Sbjct: 456 IGVGQYQHDVDPSSLGRSLDDVVAACVNQVGVDVNAA-----SIELLARVSGLGPKLAEA 510
Query: 683 LQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHP 742
+ R G +R+D + LG K F A GFLR+ LD T +HP
Sbjct: 511 VVRYRNEHGPFRSRRDLLAVPRLGPKAFEQAAGFLRIHDGDNP---------LDRTAVHP 561
Query: 743 ESYGLAQELAKEV 755
E Y + + +AK++
Sbjct: 562 ERYPIVERMAKDL 574
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,774,619,401
Number of Sequences: 23463169
Number of extensions: 1069012345
Number of successful extensions: 6332709
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6755
Number of HSP's successfully gapped in prelim test: 22804
Number of HSP's that attempted gapping in prelim test: 4772739
Number of HSP's gapped (non-prelim): 518445
length of query: 1344
length of database: 8,064,228,071
effective HSP length: 155
effective length of query: 1189
effective length of database: 8,722,404,172
effective search space: 10370938560508
effective search space used: 10370938560508
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 84 (37.0 bits)