BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039337
(1344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7KZ85|SPT6H_HUMAN Transcription elongation factor SPT6 OS=Homo sapiens GN=SUPT6H PE=1
SV=2
Length = 1726
Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust.
Identities = 364/1275 (28%), Positives = 600/1275 (47%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + AK +++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV DG+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS S
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>sp|Q62383|SPT6H_MOUSE Transcription elongation factor SPT6 OS=Mus musculus GN=Supt6h PE=1
SV=2
Length = 1726
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 361/1275 (28%), Positives = 599/1275 (46%), Gaps = 171/1275 (13%)
Query: 29 WIY-NQLLSGTLPL-----FGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAM 82
WIY N + T+ L + RG + + I L + Q ++PFIA
Sbjct: 319 WIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIKEALGFMRNQHFEVPFIAF 378
Query: 83 YRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSALQS 142
YRKE L +N+ LW + D+KW L+ RK L
Sbjct: 379 YRKEYVEPEL------HIND-----------------LWRVWQWDEKWTQLRIRKENLTR 415
Query: 143 YYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER--------EVDDVDLKFNLH 194
++K + Y++ ++ L D I ++L+ + ER E+ DV F L+
Sbjct: 416 LFEKMQAYQ----YEQISADPDKPLADGI-RALDTTDMERLKDVQSMDELKDVYNHFLLY 470
Query: 195 F----PPGEVGVDEG----------------------------QYKRPKRSTKYSSCSKA 222
+ P + + K+ R Y+ C A
Sbjct: 471 YGRDIPKMQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSA 530
Query: 223 GLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARH 282
GL +A KFG + EQ G L E E P E+A ++ C+ F + +AVL+GAR+
Sbjct: 531 GLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARY 590
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
M A++I+ EP VR+ +R F + A ++ PT G +D H K+L+ KP+++ D
Sbjct: 591 MVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRD 650
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDSL------NKLFSDCKEHYLSDGVSKSAQLWNDQRE 396
Q+L I AE+E LL + I + + F + K+ Y D S Q WN QR
Sbjct: 651 DQFLKIGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRT 710
Query: 397 LILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEE 456
+ ++ AL FL M KE ++ + A+ ++ + L+N + V PY R D + D++
Sbjct: 711 MAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPY-RPDQQVEEDDD 769
Query: 457 -------AAPRVLACCWGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKN 508
RVL + + F +++ GEV D L T R R+++ +K
Sbjct: 770 FMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKK 829
Query: 509 DQ--ERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIV 566
Q E L KF+++ +PHVV + N L +D+ I+ H D G ++ + +
Sbjct: 830 AQDIETLKKFLVNKKPHVVTIAGENRDAQMLTEDVKRIV------HELDQGQQLSSIGVE 883
Query: 567 YGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLC 626
D L LY NS+ S + +++AV+L R +Q+PL A +C +IL K
Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943
Query: 627 PLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRS 686
PL+ + +E + ++ N+VG+D+N AI + A +Q++ GLGPRK L +
Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003
Query: 687 LVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESY 745
L + + +R VT +G KVF+N GFL++ + S+ +I++LD +R+HPE+Y
Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063
Query: 746 GLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NK 802
A+++A + +E D + ++ A+E + + P+ LK LD +E +R+ +K
Sbjct: 1064 EWARKMAVDA----LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1119
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRV 857
TLY IR EL ++D R Y+ P+ +E F M++ ET +T G+++ V RR
Sbjct: 1120 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1179
Query: 858 QGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE---------------------- 887
QG+ +AI E+GL ++++ S+ W +
Sbjct: 1180 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1239
Query: 888 -----LSDKLHE--------GDILTCKIKSIQKNRYQVFLVCRESEM--RNNRYQHCQNL 932
LSDK+ + G + C+I I ++ L CR S++ RNN ++ +
Sbjct: 1240 IPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK-- 1297
Query: 933 DPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESI 992
D YY + + +QE+ K K+ + K R+I HP F N+ +A K++ + G+ I
Sbjct: 1298 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1356
Query: 993 IRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEV 1052
IRPSS+G ++LT+T KV G+Y H D+ E GK++ +G TL I + FEDLDE+
Sbjct: 1357 IRPSSKGENHLTVTWKVSAGIYQHVDVREEGKENA-----FSLGATLWINSEEFEDLDEI 1411
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGT 1109
V RY+ P+ S + +L+++ ++ G + +++ELL K E PT I Y E PG
Sbjct: 1412 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1471
Query: 1110 FILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAA 1169
F+L Y P EY+ + P+GF++R ++F ++ L +F+ H DP PS +
Sbjct: 1472 FLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSNRT- 1530
Query: 1170 MVPMRSPANGGSTAS 1184
R+PA+ +T +
Sbjct: 1531 ----RTPASINATPA 1541
>sp|Q8UVK2|SPT6H_DANRE Transcription elongation factor SPT6 OS=Danio rerio GN=supt6h PE=1
SV=1
Length = 1726
Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust.
Identities = 376/1343 (27%), Positives = 630/1343 (46%), Gaps = 185/1343 (13%)
Query: 11 KALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRD------DIM 64
+A+ P + + + +E+ WIY S T + Q G + SR I
Sbjct: 290 RAIPVKPAEDDELEEEAEWIYRNAFS-TPTISMQESTDYLDRGTTTNFSRKGPSTIAKIK 348
Query: 65 RFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIH 124
L+ + Q ++PFIA YRKE + E+N ++ LW +
Sbjct: 349 EALNFMRNQHFEVPFIAFYRKEYV--------EPELNIND---------------LWKVW 385
Query: 125 DLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETER-- 182
D+KW L+ RK L +++ + +I + ++ L DS ++ L+ A+ ER
Sbjct: 386 QWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADP----DKPLADS-TRPLDTADMERLK 440
Query: 183 ------EVDDVDLKFNLHF-------------------PPGEVGVDEGQ----------- 206
E+ DV F L++ EV ++G+
Sbjct: 441 DVQSIDELGDVYNHFLLYYGRDIPKMQNAAKGGKKKLKKIKEVSEEDGEEAEVEEEEEEE 500
Query: 207 ------YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEE 260
K+ R YS C AGL +A KFG + EQ G L E E P E
Sbjct: 501 EQKGPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLE 560
Query: 261 MASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAI 320
+A ++ C+ FN+ +AVL+GAR+M A++I+ EP VR +R F + A ++ PT G +
Sbjct: 561 LAKDYVCSQFNTPEAVLEGARYMVAMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKDV 620
Query: 321 DSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSL-----NKLFSDC 375
D H K+L+ KP+++ Q+L + AEEE LL + I + + F +
Sbjct: 621 DEAHFAYSFKYLKNKPVKELSGDQFLKMCLAEEEGLLAIDICIDLVGVKGYGDQTYFDEI 680
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
K+ Y D S Q WN QR L ++ +L FL P M KE ++ + AK ++ K L
Sbjct: 681 KQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNKLIAEAKDNIVKSCCKKL 740
Query: 436 WNKVSVGPYQRKDNDITPDEE-------AAPRVLACCWGPGKPETTFV-MLDSSGEVVDV 487
+N + V PY R D + D++ RVL + G+ F +++ GEVVD
Sbjct: 741 YNWLKVAPY-RPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDTPVFCSLINGEGEVVDF 799
Query: 488 LFTGCLTLRSQNVR--DQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEII 545
L R R +++ K+ D E L KF++ +PHVV + N + +DI I
Sbjct: 800 LRLPYFLKRRNAWREDEREKKQQDVENLKKFLLSKKPHVVAVSGENRDAHMVMEDIKRTI 859
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
++ + V + + D L LY NS+ S +++AV++ R +Q+
Sbjct: 860 SELEQNSSLPV------VGVELVDNELAVLYMNSKKSEADFRDYPPLLRQAVSVARKIQD 913
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PL A +C +IL KL PL+ + +E + ++ N+VG+D+N AI +
Sbjct: 914 PLVEFAQVCSTDDDILCLKLHPLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYT 973
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
+ +Q+I GLGPRK + L + L + + R VT +G KVF+N GF+++ +
Sbjct: 974 QSLVQYICGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASL 1033
Query: 725 AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMAIEHVRDRPDL 784
S+ +I++LD +R+HPE+Y A+++A + +E D + ++ A+E + + P+
Sbjct: 1034 GDSTDSYIEVLDGSRVHPETYEWARKMAVDA----LEYDESAEDANPAGALEEILENPER 1089
Query: 785 LKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETE 841
LK LD +E +R+ NK TLY IR EL ++D R Y+ P+ +E F M++ ET
Sbjct: 1090 LKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKETP 1149
Query: 842 DTLAEGRVVQATV-----RRVQGQ---RAICVLESGL--AGMLMKEDY---SDDWRDSE- 887
+T G+++ V RR QG+ +AI E+GL ++++ S+ W +
Sbjct: 1150 ETFYIGKLITCVVTNIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDS 1209
Query: 888 --------------------------LSDK--------LHEGDILTCKIKSIQKNRYQVF 913
LSDK + G + C+I I ++ V
Sbjct: 1210 GSCPGQAIGVRTRLDNAVMGFIPTKFLSDKVVKHPEERVKPGMTVHCRIMKIDIEKFNVD 1269
Query: 914 LVCRESEM--RNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCF 971
L CR S++ +NN ++ + D YY + + +QE+ +K+K+ + K R+I HP F
Sbjct: 1270 LTCRTSDLSDKNNEWKLPK--DTYYDFDAETDDVKQEEEQKKKQQRTTYIK-RVIAHPSF 1326
Query: 972 QNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKS 1031
N+ +A K++ + + G+ +IRPSS+G ++LT+T KV DG+Y H D+ E GK++
Sbjct: 1327 HNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENA---- 1382
Query: 1032 LVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRK---GSKAEVDELLRIE 1088
+G TL I + FEDLDE+ RY+ P+ + + +L ++ F + G + +++ELL
Sbjct: 1383 -FSLGHTLWINTEEFEDLDEITARYVQPMAAFARDLLGHKYFHECNGGDRKKMEELLVRT 1441
Query: 1089 KAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAY 1148
K E PT I Y + PG F+L Y P EY+ + P GF++R ++F ++ L +
Sbjct: 1442 KKEKPTFIPYYISACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRW 1501
Query: 1149 FQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSSTPGS 1208
F+ H DP P + ++ R+PA+ +T + + N R +S P +
Sbjct: 1502 FKDHYQDP----VPGVTPASSRT--RTPASVNATPA-------NINIADLTRAVNSLPRN 1548
Query: 1209 RTGR--NDYRNGGGRDGHPSGLP 1229
T + N G+ +P+ P
Sbjct: 1549 MTSQMFNAIAAVTGQGQNPNTTP 1571
>sp|Q9W420|SPT6H_DROME Transcription elongation factor SPT6 OS=Drosophila melanogaster
GN=Spt6 PE=1 SV=1
Length = 1831
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 355/1323 (26%), Positives = 605/1323 (45%), Gaps = 200/1323 (15%)
Query: 9 LRKALAGPPTDGESIVD-ESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFL 67
LR+ P +G +D E+ WIY + Q S ++ + + I + L
Sbjct: 295 LREVPVTPVPEGSDELDLEAEWIYKYAFCKHT-VSEQEKPESREKMRKPPTTVNKIKQTL 353
Query: 68 DLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLD 127
+ + Q+L++PFIA YRKE + E+N D+ LW ++ D
Sbjct: 354 EFIRNQQLEVPFIAFYRKEYV--------KPELNIDD---------------LWKVYYYD 390
Query: 128 KKWLLLQKRKSALQSYYKKRYE--------EESRRIYDETRLALNQQLFDSISKSLEAAE 179
W L +RK L+ ++K + + + + D+ RL L DS + L +
Sbjct: 391 GIWCQLNERKRKLKVLFEKMRQFQLDTLCADTDQPVPDDVRLIL-----DSDFERLADVQ 445
Query: 180 TEREVDDVDLKFNLHFP----------------------------PGEVGVDEG------ 205
+ E+ DV + F L++ E G D
Sbjct: 446 SMEELKDVHMYFLLNYSHELPRMQAEQRRKAIQERREAKARRQAAAAENGDDAAEAIVVP 505
Query: 206 -------------QYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELE 252
Q K+ S+ Y+ KAG+ A FG + EQ L +E+
Sbjct: 506 EPEDDDDPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEIT 565
Query: 253 DPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCP 312
P E+A + F ++ V+ A+++ A +++ EP +RK +R ++ D A ++ P
Sbjct: 566 QESIGPTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRP 625
Query: 313 TPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL- 371
T +G ID +K++ +KP+ Q++ + AEEEKLL++T L E N
Sbjct: 626 TKNGMVLIDENSPVYSMKYVAKKPVSDLFGDQFIKLMMAEEEKLLEITF-LEEFEGNACA 684
Query: 372 -------FSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAK 424
+ K Y D +K Q WN R ++ AL +++P ++KE RS + A+
Sbjct: 685 NGTPGDYVEESKALYQLDQFAKHVQEWNKLRAECVQLALQKWVIPDLIKELRSTLHEEAQ 744
Query: 425 SWLLMEYGKALWNKVSVGPYQRKDNDITPD---EEAAP----RVLACCWGPGKPETTFVM 477
++L L+ + V PY+ + + PD EE + RVL + P F
Sbjct: 745 QFVLRSCTGKLYKWLKVAPYKPQ---LPPDFGYEEWSTLRGIRVLGLAYDPDHSVAAFCA 801
Query: 478 LDS-SGEVVDVLFTGCLTLR--SQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSC 534
+ + G++ D L + R S N+ ++ K D +L F+ +PH+VV+GA +
Sbjct: 802 VTTVEGDISDYLRLPNILKRKNSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGAESRDA 861
Query: 535 TSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVK 594
+++ DI EI+ H + + + + D L ++Y NS+ +K
Sbjct: 862 QNIQADIKEIL------HELETSEQFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLLK 915
Query: 595 RAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGL 654
+A +L R +Q+PL + LC EIL + PL+ + ++ + ++ T++VGL
Sbjct: 916 QAASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGL 975
Query: 655 DINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNA 713
DINL + LQ+I GLGPRK +L + L ++ + R VT LG +VF+N
Sbjct: 976 DINLMVQNSRTINLLQYICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINC 1035
Query: 714 VGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEM 773
GF+++ S S+ ++++LD +R+HPE+Y A+++A + D D+E
Sbjct: 1036 SGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYD------DEETNPAG 1089
Query: 774 AIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWRNQYKEPSQD 830
A+E + + P+ LK LD E +R+ +K TLY IR EL ++D+R Y +PS +
Sbjct: 1090 ALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAE 1149
Query: 831 EEFYMISGETEDTLAEGRVVQA-----TVRRVQG-----------------QRAIC---- 864
E F M++ ET D+ G+ V A T RR QG Q C
Sbjct: 1150 ELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLDSANPVRLDSNESWQCPFCHKDD 1209
Query: 865 -------------------------VLESGLAGMLMKEDYSD-DWRDSELSDKLHEGDIL 898
LE+GL G + ++ SD R+ E +++ ++
Sbjct: 1210 FPELSEVWNHFDANACPGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPE--ERVRVSQMI 1267
Query: 899 TCKIKSIQKNRYQVFLVCRESEMR--NNRYQ-HCQNLDPYYHEERSSRQSEQEKARKEKE 955
+I I +R+ V R ++++ NN ++ N Y EE+ +R+ KAR
Sbjct: 1268 HVRIIKIDIDRFSVECSSRTADLKDVNNEWRPRRDNYYDYVTEEQDNRKVSDAKARA--- 1324
Query: 956 LAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYA 1015
L +K + R+I HP F N + E + +L+ + GE +RPSS+ +LT T KV D ++
Sbjct: 1325 LKRKIYARRVIAHPSFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVADDIFQ 1384
Query: 1016 HKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFR- 1074
H D+ E GK++ +G++L IG + FEDLDE++ R+I P+ + ++ Y+ ++
Sbjct: 1385 HIDVREEGKEND-----FSLGRSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKP 1439
Query: 1075 ---KGSKAEVD---ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLY 1128
G + E D +LLR EKA P +I Y F S PG F+L+Y+ T HEY+ +
Sbjct: 1440 NMVTGDENERDVMEKLLREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVM 1499
Query: 1129 PKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP---MRSPANGGSTASA 1185
P+G++FR ++F+ ++ L+ +F+ H DP + P+ S + + P MR P S++
Sbjct: 1500 PEGYRFRGQIFDTVNSLLRWFKEHWLDPT--ATPASASASNLTPLHLMRPPPTISSSSQT 1557
Query: 1186 GSG 1188
G
Sbjct: 1558 SLG 1560
>sp|Q93148|SPT6H_CAEBR Suppressor of Ty 6 homolog OS=Caenorhabditis briggsae GN=emb-5 PE=2
SV=2
Length = 1521
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 308/1194 (25%), Positives = 537/1194 (44%), Gaps = 156/1194 (13%)
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQ 134
++PFI YRKE +LL +NN LW ++D D+K+ L
Sbjct: 366 FEVPFIGFYRKESIDNLLT------MNN-----------------LWIVYDYDEKYCHLS 402
Query: 135 KRKSALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFN 192
++K L ++ Y+E S I + R L D + AET ++ D+ F
Sbjct: 403 EKKRRLYDLMRRMREYQELSDDITAKRRPINEMDLID-----INFAETLEQLTDIHANFQ 457
Query: 193 LHF----------------PPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSE 236
L + GE ++K R+ KY C + G+ E+A +FG +++
Sbjct: 458 LLYGSLLEDMTKWEKERRAADGEETEYRAKFKSSIRNDKYQMCVENGIGELAGRFGLTAK 517
Query: 237 QLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
Q L K +++ P E A + C F + VL GA+ M A EIS +P VR
Sbjct: 518 QFAENLDWRKH--DIDQDSAFPLEAAEEYICPAFIDRETVLNGAKFMLAKEISRQPLVRS 575
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
VR F DNA PT G ID H ++++ KP+R D ++L KA+++ L
Sbjct: 576 RVRQEFRDNAHFWVKPTKKGRDTIDETHPLFNKRYIKNKPIRNLTDEEFLYYHKAKQDGL 635
Query: 357 LQVTIKLPEDSLNKLFSDCKEHYLSDGV------SKSAQLWNDQRELILKDALDNFLLPS 410
+ + + D + +LSD + + + + WN R+ + A+ L+P
Sbjct: 636 IDMVLMYESDEDQAANQFLVKKFLSDSIFRKDEYTDNVEQWNAVRDQCVNMAITEMLVPY 695
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVG---PYQRKDNDITPDEEAAPRVLACCWG 467
M +E + + AK + + K ++++ P + K ++ + A R++A C+
Sbjct: 696 MKEEVYNTILEEAKMAVAKKCKKEFASRIARSGYVPEKEKLDEEDEEHSARRRMMAICYS 755
Query: 468 PGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLK-FMMDHQPHVV 525
P + E +F VM+D +G +VD L T R + + K + L K F+ +PH +
Sbjct: 756 PVRDEASFGVMVDENGAIVDYLRMVHFTKRGHGGGNTGALKEESMELFKKFVQRRRPHAI 815
Query: 526 VLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQ 585
L ++ CT LK D+ E + ++ + ++++ D L ++Y S IS +
Sbjct: 816 ALNIEDMECTRLKRDLEEAVAELYSQ-----SKIFSQINVYLMDNELAKVYMRSNISIAE 870
Query: 586 LPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVM 645
P +++AV+L R L +P+ A L +I L PL+ + + ++ +
Sbjct: 871 NPDHPPTLRQAVSLARQLLDPIPEYAHLWNSDEDIFCLSLHPLQRDIDQEILAQLLNHEL 930
Query: 646 VDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG 704
V+ N+ G+DIN LQF GLGPRKA SL +S+ I +R V
Sbjct: 931 VNRVNEEGVDINKCAEFPHYTNMLQFTCGLGPRKATSLLKSIKANDNLIESRSKLVVGCK 990
Query: 705 LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDL 764
LG KVF+N GF+R+ + + ++++LD +R+HPE+Y A+++A + D D
Sbjct: 991 LGPKVFMNCAGFIRIDTRRVSDKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDDSADP 1050
Query: 765 NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQDWR 821
A++ + + P+ L+ LD E R+ K+ TLY I EL ++D R
Sbjct: 1051 T-------AALQEIMETPERLRDLDLDAFADELNRQGFGEKKATLYDISSELSERYKDLR 1103
Query: 822 N----------------------------------QYKEPSQDEEFYMISGETED----- 842
QY++ +D MI TE+
Sbjct: 1104 APFVEPSGEALYDLLTRSGKEVKVGCKMLGTVQSVQYRKVERDTIDSMIPEHTEEDQYIC 1163
Query: 843 ------TLAEGRVVQATVRRVQGQRAICV---------LESGLAGMLMKEDYSDDWRDSE 887
T A+ + V+ + G+ CV L++G+ + S D+
Sbjct: 1164 PSCKIFTAADPQSVREHLLNA-GRPGGCVGSACGIRVRLDNGMTAFCPNKFISSSHVDNP 1222
Query: 888 LSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQ 947
L+ ++ K+ +I K ++ + L C+ S+++ + D ++ ++ Q +
Sbjct: 1223 LT-RVKLNQPYWFKVMAINKEKFSILLSCKSSDLKED---APAERDDFWDQQ----QYDD 1274
Query: 948 EKARKEKELAKKHFKE----RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYL 1003
+ A +KE KK + R+I HP F NV+ + A K+L + + IIRPS+ S L
Sbjct: 1275 DVAAMKKETTKKKDADTRVKRVIAHPNFHNVSYEAATKMLDEMDWSDCIIRPSANKESGL 1334
Query: 1004 TLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSH 1063
++T K+ D +Y + + E KD + IG+TL +G + FEDLDE++ R++ P++
Sbjct: 1335 SVTWKICDRIYHNFFVKESAKDQ-----VFSIGRTLSVGGEDFEDLDELIARFVLPMIQI 1389
Query: 1064 LKAMLSYRK-FRKGSKAEVD--ELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI--RST 1118
+ +++ F +G+ + D E EK R Y F S+ P F ++Y+ S
Sbjct: 1390 SHEITTHKYFFTQGTSEDTDQVETFVHEKRRELGRSPYVFSASYRQPCQFCISYMFDNSN 1449
Query: 1119 NPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVP 1172
HE+ + P+G +FR++ F+ +DR++A+F+RH ++P P IRS + P
Sbjct: 1450 RIRHEHFKISPRGIRFRQQNFDSLDRMMAWFKRHFNEP----PPGIRSSLSYRP 1499
>sp|P34703|SPT6H_CAEEL Suppressor of Ty 6 homolog OS=Caenorhabditis elegans GN=emb-5 PE=1
SV=1
Length = 1521
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 311/1177 (26%), Positives = 533/1177 (45%), Gaps = 156/1177 (13%)
Query: 79 FIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKS 138
FI YRKE+ +LL +NN LW ++D D+KW L ++K+
Sbjct: 369 FIGFYRKEDIDNLLT------MNN-----------------LWRVYDFDEKWCHLSEKKN 405
Query: 139 ALQSYYKK--RYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHF- 195
+ ++ Y+E S + + R + L D+ + AET ++ D+ F L +
Sbjct: 406 KIYDLMRRMREYQELSDDLTAKRRPISDADLMDT-----KYAETLEQLTDIHANFQLLYG 460
Query: 196 ---------PPGEV-GVDEGQYKRPK-----RSTKYSSCSKAGLWEVASKFGYSSEQLGL 240
G + G +E Q R K R+ KY C + G+ E+A +FG +++Q
Sbjct: 461 ALLDDMIRWEKGRLTGEEEEQEYRVKFKSSIRNDKYQMCVENGIGELAGRFGLTAKQFSE 520
Query: 241 QLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
L+ +K E +DP P E A + C F+ S VL GA+ M A EIS +P VR VR
Sbjct: 521 NLNWKKHDIE-QDPM-LPLEAAEEYVCPAFSDSDMVLNGAKFMLAKEISRQPQVRHSVRQ 578
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVT 360
F +A PT G ID H ++++ KP+R ++L KA+E+ L+ V
Sbjct: 579 EFRQSAHFWIKPTKKGRDTIDQTHPLYDKRYIKSKPVRSLTAEEFLFYHKAKEDGLVDVL 638
Query: 361 IKLP----EDSLNKLFSDCKEHYLSDGV------SKSAQLWNDQRELILKDALDNFLLPS 410
I +DS N L + YLSD + +++ + WN R+ + A+ L+P
Sbjct: 639 IMYESEEDQDSNNYLVN----KYLSDSIFQKDEYTENVEQWNSVRDECVNMAITEMLVPY 694
Query: 411 MVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPY-----QRKDNDITPDEEAAPRVLACC 465
M E + + AK+ + + K +++S Y D+D D+ A R++A C
Sbjct: 695 MRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNNDDDDDGMDQHGARRIMAVC 754
Query: 466 WGPGKPETTF-VMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLK-FMMDHQPH 523
+ + E +F VM+D +G +VD L T R+ + +K + L K F+ +PH
Sbjct: 755 YPTERDEASFGVMVDENGAIVDYLRMVHFTKRTFGGGNNGLRKAESMDLFKKFVQRRKPH 814
Query: 524 VVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISS 583
+ L ++ CT LK D+ E + + ++ + + D ++Y S +S
Sbjct: 815 AIGLNIEDMECTRLKRDLEEAVADLFSQNLI-----YKPIPVFLMDNEAAKVYMRSNVSL 869
Query: 584 DQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQ 643
+ P +++A++L R L +P+ A L +I L PL+ + ++ ++
Sbjct: 870 AENPDHPPTLRQALSLARLLLDPIPEYAHLWNIDEDIFCLSLHPLQRDIDQEQLALVLSH 929
Query: 644 VMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTA 702
+V+ N+ G+DIN LQF GLGPRKA L +S+ I +R V
Sbjct: 930 ELVNKVNEEGVDINKCAEFPHYTNMLQFTCGLGPRKATDLLKSIKANDNLIESRSKLVVG 989
Query: 703 HGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEG 762
LG KVF+N GF+++ + + ++++LD +R+HPE+Y A+++A + D
Sbjct: 990 CKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDDSA 1049
Query: 763 DLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELIHGFQD 819
D A++ + + PD L+ LD E R+ K+ TLY I EL ++D
Sbjct: 1050 DPT-------AALQEIMESPDRLRDLDLDAFADELSRQGFGEKKSTLYDISSELSARYKD 1102
Query: 820 WRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATV-----RRVQGQRAICVL-------- 866
R ++EP+ E Y + + + EG V TV R+V A +L
Sbjct: 1103 LRQPFQEPT-GELLYDLLARSGKEIREGAKVLGTVQSVQYRKVDKDAADSMLPDVGEDGL 1161
Query: 867 -----------------------------------------ESGLAGMLMKEDYSDDWRD 885
++G+ G ++ S D
Sbjct: 1162 FTCPCCKSFTSSAPGGIQEHMLGDSRQGGCPGTPVGIRVRFDNGMTGFCPNKNISSSHVD 1221
Query: 886 SELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQS 945
+ L+ ++ K+ + K R+ +FL C+ S+++ + D Y+ E +
Sbjct: 1222 NPLT-RVKINQPYYFKVLKLDKERFSLFLSCKSSDLKED---DLSQRDQYWDEHQYQADL 1277
Query: 946 EQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTL 1005
E K+ +K+ +R+I HP F NV+ + A K+L + E IIRPS+ S L++
Sbjct: 1278 ELMKSESKKKTEANTRVKRVIAHPNFHNVSYEAATKMLDEMDWSECIIRPSANKDSGLSV 1337
Query: 1006 TLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLK 1065
T K+ D VY + + E KD + IG+ L +G + FEDLDE++ R++ P++
Sbjct: 1338 TWKICDRVYHNFFVKESAKDQ-----VFSIGRQLSVGGEDFEDLDELIARFVQPMIQISH 1392
Query: 1066 AMLSYRKFRKGSKAE----VDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI--RSTN 1119
+ +++ F E V++ +R +K E R Y F S+ P F ++Y+ +
Sbjct: 1393 EITTHKYFFPNGTCEETEAVEQFVREKKREL-GRSPYVFSASYRQPCQFCISYMFDNTER 1451
Query: 1120 PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP 1156
HEY + P G +FR + F+ +DR++A+F+RH +P
Sbjct: 1452 IRHEYFKIVPHGVRFRHQNFDTLDRMMAWFKRHFHEP 1488
>sp|Q09915|SPT6_SCHPO Transcription elongation factor spt6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spt6 PE=1 SV=2
Length = 1365
Score = 350 bits (899), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 311/1115 (27%), Positives = 520/1115 (46%), Gaps = 132/1115 (11%)
Query: 75 LDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL-DKKWLLL 133
L++PFI +R++ + + E+N + TP L + LW I L K W L
Sbjct: 331 LEVPFIWQHRRDYIVH--NNRERNTI----------TPLLSQND-LWNIFFLCTKFWSLH 377
Query: 134 QKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNL 193
K++ L+ Y + L +N L + EAA + +DD L +
Sbjct: 378 SKKQDILKLY---------------SDLGINDDL---VVPFCEAASSLDAIDD--LNDYI 417
Query: 194 HFPPGEVGVDEGQY-----KRPKRSTKYS---SCSKAGLWEVASKFGYSSEQLGLQLSLE 245
HF E D +RP+ S KYS K+ L+ + +FG S++ ++
Sbjct: 418 HFTYSEQIRDRALLMGTGLRRPQGS-KYSFFEKFRKSSLYNLVKEFGMSAKDFSFNVAQG 476
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
+ED +PEE++ + +S + VLQ AR + A EI +P RK R +
Sbjct: 477 ARLRFVEDNTLSPEELSRTYVTNELSSPEQVLQKARRVLAEEIIHDPQFRKSFRDKLYNA 536
Query: 306 AVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKL 363
VV+ T G I S H + K+L+ KPL FE L ++ KAEEE L+Q++I+
Sbjct: 537 GVVTVLATQKGVRKIGSEHPYYEFKYLKRKPLGSFELEPILFLKMLKAEEEGLIQLSIEF 596
Query: 364 --PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLM 419
P+D +F E ++SD S++A WN QREL+LK+ F L P ++E +
Sbjct: 597 EDPDD----VFKGLLELFVSDNFSENAMQWNAQRELVLKEVFKRFSALAPDAIRET---L 649
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTF--VM 477
R L M L++++ PY+ + D P VLA G G+ V
Sbjct: 650 RSRYLDELGMRCRNQLFSRLDQAPYEPSTKNF--DRGTIPSVLAVSNGKGESSDAIICVF 707
Query: 478 LDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
+D GE D +L+ ++RD +Q +F+ +P V+ + +++S +
Sbjct: 708 VDDVGEPTD-------SLKLADLRDLA----NQAMFAEFVEKVKPDVIGVSGMSVSAHKI 756
Query: 538 KDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAV 597
+ +H +D + + ++ ++ + RLY+NS + D+ P V
Sbjct: 757 R------------QHVQDSLTSHEPVDLIMVNDEVARLYQNSTRAVDEFPTLPTISCYCV 804
Query: 598 ALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDIN 657
AL RY+QNPL A + GR+++S P ++ L PD + +E +VD+++ VG+DIN
Sbjct: 805 ALARYVQNPLFEYAAM---GRDLMSLSFDPWQHLLPPDVLWKYLETALVDISSLVGIDIN 861
Query: 658 LAIHREWQFAPLQFISGLGPRKA-ASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGF 716
A+ +++ L +I+GLGPRKA L++ G I R D ++ + +KVF+N F
Sbjct: 862 EAVTNKYEANILPYIAGLGPRKADYVLKKIAATGGRIDNRSDLISKQIMSRKVFINCSSF 921
Query: 717 LRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVY------------NRDIEGDL 764
+ +D+LD TRIH E Y LA+++A + NR + L
Sbjct: 922 FIIPNDEYPN-----MDILDSTRIHNEDYELARKMASDALELDEEDIEELETNRGVVYHL 976
Query: 765 ---NDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWR 821
N+ E+ +E D+ L+R +K KR TL IR EL + + R
Sbjct: 977 LEENETGKLDELVLEEYADQ--------LEREFHQK----KRNTLEKIRLELKDPYGEQR 1024
Query: 822 NQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSD 881
N + + + E F M++GE + L +V VRRV + L+ G+ G + ++ SD
Sbjct: 1025 NVFHKLTPSEIFLMLTGENPEELQADAIVPVNVRRVTNRFVAVKLDCGIDGNIKADEVSD 1084
Query: 882 DWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR--NNRYQHCQNLDPYYHEE 939
D+ L G + I S+ + + V L R S ++ N++ Q + Y+ E
Sbjct: 1085 DFIPP--PQLLQVGQTVEGVIISLDEANFMVDLSLRNSVLQSANSKRQTSSHRTSYWDTE 1142
Query: 940 RSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRG 999
R +E+ +A + E R+I HP F+++ A +A LS + G+ +IRPSS+G
Sbjct: 1143 AEKRDTERMQAETQAE----QRVARVIKHPLFKDLNASQAEAYLSKMQVGDLVIRPSSKG 1198
Query: 1000 PSYLTLTLKVYDGVYAHKDIIEGGKDHKDI--KSLVGIGKTLKIGEDTFEDLDEVVDRYI 1057
++ +T KV +G Y H D++E K+++ + L+ G+ K+ + DLDE++ +I
Sbjct: 1199 SDHIVVTWKVAEGSYQHIDVLELEKENEFTIGQKLLVKGRFEKMTY-QYSDLDELIVLHI 1257
Query: 1058 DPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRS 1117
+ + M + KFRKG++AE ++ L P R Y F H+HPG FIL + S
Sbjct: 1258 KAIAKKIDEMCIHDKFRKGTQAETEKWLESYSEANPKRSCYAFCFDHQHPGYFILCFKAS 1317
Query: 1118 TN-PHHEY-IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
N P + + + P F + ++ D+ L F+
Sbjct: 1318 VNSPVTAWPVKVIPNAFFLQGNVYGDMTALCNGFK 1352
>sp|Q4PI89|SPT6_USTMA Transcription elongation factor SPT6 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=SPT6 PE=3 SV=1
Length = 1723
Score = 342 bits (877), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 296/1091 (27%), Positives = 502/1091 (46%), Gaps = 92/1091 (8%)
Query: 207 YKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFK 266
+K+P +Y K L E+A KFG +S++L ++ DP+E+P + A F
Sbjct: 558 FKKPSLVGQYERNKKTVLAELAKKFGITSDELASNVTSHTRQYSPRDPEESPFKFAEQFT 617
Query: 267 CAMF--NSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFH 324
+ + +S + L A+ M + EI +P +++ +R +F D A ++ PT G + ID H
Sbjct: 618 GSAWGAHSPEIALAKAKMMLSQEIGKDPILKREMRQLFKDAAEINIEPTERGMTVIDDQH 677
Query: 325 QFAGVKWLREKPLRKFED--AQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCKEHYLSD 382
+A K++ KP R +Q+L + +AE+E L+++ I L + L + + +Y S+
Sbjct: 678 PYANFKFIANKPARLVPQNPSQYLQMLQAEDELLIKLDIDLKDVVLTRFEARLYNNYASE 737
Query: 383 GVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVG 442
GV + + WN+QR ++++AL L+P+ + + ++ LL + +V G
Sbjct: 738 GVGELSNAWNEQRRDVIREALKTHLVPNGRIWLKEFLREESRETLLRHVDVLMTKRVQEG 797
Query: 443 PYQ------RKDNDITPDEEAAPRVLACCWGPGKPETTFVM---LDSSGEVVDVLFTGCL 493
P+ R + +E+ PRVLA G G P V LD G +
Sbjct: 798 PFMSKSMMARNRDPKIEEEDRIPRVLAVSHGGGDPRKDVVQAVYLDERGRFRE--HATFD 855
Query: 494 TLRSQNVRDQQSKKNDQER-------------LLKFMMDHQPHVVVLGAVNLSCTSLKDD 540
LR + R Q ++ + ER +K + +P +VV+ ++ LK
Sbjct: 856 DLRPLSARQMQERELELERTRGKAEFVDHRADFVKLLKQRRPDIVVVSGWSVRTAELKRH 915
Query: 541 IYEIIFKMVEE-------HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNV 593
+ E+ +E H D+ + + +V + + R+Y++S ++++ P
Sbjct: 916 VQELADTAHQEICDADRLHS-DLERDQAVIDVVTCHDDVARIYQHSSRAAEEFPELSELG 974
Query: 594 KRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVG 653
+ +AL RY Q+P+ A L G ++ + L P + L D E+ + V N+ G
Sbjct: 975 RYCLALARYAQSPVNEFAAL---GSDLTAVILDPNQRLLPQDRLRLHFERCIGAVVNENG 1031
Query: 654 LDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRA--GAIFTRKDFVTAHGLGKKVFV 711
++IN A+ + L F++GLGPRKA +L ++ G + R ++ + L +VF
Sbjct: 1032 VEINQAMTSTYLQTMLPFVAGLGPRKAHALVNAISTKLEGTLINRTLLISRNILTFQVFQ 1091
Query: 712 NAVGFLRVRRSGQ-AASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDA 770
N FLR+ + A D+LD TRIHPE Y +++A + N+ E DL + +
Sbjct: 1092 NCASFLRIEQDMLLEADEDDVPDVLDSTRIHPEDYDFPRKMAADALNKH-EEDLEGEHPS 1150
Query: 771 LEMA-IEHVRDRPDLLKTYLLDRH---IKEKKRENKRETLYLIRRELIHGFQDWRNQYKE 826
L + D D L T LD + + E+K E KR TL+ R ELI + D R + E
Sbjct: 1151 LPCKELMEDADPADKLNTLDLDNYATMLFERKGERKRATLHSCRTELIKPYDDLREKQSE 1210
Query: 827 PSQDEEFYMISGETEDTLAEGRVVQATVRRVQ-GQRA-----ICVLESGLAGMLMKEDYS 880
PS +E M +GET TLAEG VV V RVQ G R C L+SG+ G + E
Sbjct: 1211 PSLEEMLTMFTGETSKTLAEGFVVSVEVTRVQEGNRMQEGHIKCRLDSGIEGTIEAEHAV 1270
Query: 881 DDWR--DSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNN-RYQHCQNLDPYYH 937
+ + L D + L ++ I V L E+++ +Q +D ++
Sbjct: 1271 EHYTPGSVRLRDLVRPQQTLDALVRKIDYKMCTVQLSISPWELQHRATHQGKTPIDIKFY 1330
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSS 997
+ R + Q + A K K + + R+I HP + N A+ L ++ G ++RPSS
Sbjct: 1331 DRRKADQWNEHAAAKAKLRIQARRQNRVIDHPNYHNFNYKAAVTFLRSQPRGTVVVRPSS 1390
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRY 1056
+G +L +T KV D VY + D+ E D +S +G+ L+I G ++ DLDE++ +
Sbjct: 1391 KGDDHLAVTWKVDDDVYQNIDVTE-----LDKESEYSLGRVLRIEGMGSYSDLDELIVNH 1445
Query: 1057 IDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIR 1116
+ P+V ++ M+++ K++ + ++ L P+R VY FG++ + PG F L++
Sbjct: 1446 VKPMVHMVEMMMNHEKYKGADEEDLHRFLTNWSLANPSRSVYAFGLNKDRPGYFNLSFKA 1505
Query: 1117 STNPHHEY--IGLYPKGFKF-RKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPM 1173
+ + + + + P FK D+ L F+ Q + S+ A
Sbjct: 1506 NRDAAIQTWPVKVLPNAFKLGPADQLADVAALCNAFK-----TQYTTQASMARGA----- 1555
Query: 1174 RSPANGGSTASAGSG----WGGSTNEGGWNRDR--SSTPGSRTGRNDYRNGGGRD----G 1223
++P GG T + G G GG T GG S+TPG GG
Sbjct: 1556 KTPYGGGRTPAPGMGGATPLGGRTPYGGVRNGMAGSATPGQGV-------AGGYTTPMIN 1608
Query: 1224 HPSGLPRPYGG 1234
S P PYGG
Sbjct: 1609 VASATPNPYGG 1619
>sp|Q8NIV6|SPT6_NEUCR Transcription elongation factor spt-6 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=spt-6 PE=3 SV=1
Length = 1402
Score = 342 bits (876), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 297/1178 (25%), Positives = 540/1178 (45%), Gaps = 103/1178 (8%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDL 69
RKA + +E+ WI N +L G + G + L+
Sbjct: 276 RKAFKNLQMTSDQFKEEARWISNLMLPSKNLSSELHGPFNKAVG-----------KVLEF 324
Query: 70 LHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERT---PTLKWHKVLWAIHDL 126
+ +++P++ +R++ + K +N D+ D E T L LW + DL
Sbjct: 325 FVIDGVEVPYVFQHRRDYLIHAKK--MRNPNRRDDPDAPEYTVDAEKLLTQDDLWKVLDL 382
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
D ++ ++++AL+ Y K E+ I +E + A++ E+ D
Sbjct: 383 DIRFRSFLEKRNALEQTYDKLKEKTRDDILEEM---------------IRQAQSIEELQD 427
Query: 187 VDLKFNLHFPP--GEVGVDEGQYKRP-----KRSTKYSSCSKAGLWEVASKFGYSSEQLG 239
+ N + ++ ++ +R R+ ++ ++ ++ G + ++L
Sbjct: 428 LQDYLNFQYSAELKDLAANDNSAQREIKRAGGRTAQFERIRRSNAYKFVQALGITPDRLA 487
Query: 240 LQLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVR 299
+ E ED P+++A A F + + V+ AR M A E+ P +RK+ R
Sbjct: 488 KNILRESSKVTSEDDSRLPDDLADTLVDADFPTGELVINAARQMLAEEMFASPRMRKHFR 547
Query: 300 SIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLL 357
F +VS T G ID + + VK+L+ + +L + KAEEE L+
Sbjct: 548 KNFYGMGIVSCRRTDKGLRKIDEANPYYEVKYLKNMSIADLAVRPELFLKMMKAEEEGLI 607
Query: 358 QVTIKLPEDS--LNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEA 415
++ + L D +LFSD + S+ S+ A WN +R+ ++ A D L+ +VK
Sbjct: 608 EIKVSLENDREFRQQLFSD----FASENFSELADKWNAERQKVIDLAFDK-LVKVIVKGV 662
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE--- 472
+ + + LL + + ++ PY+ K I PRVL G G P
Sbjct: 663 KDSLRTACQDELLKTCRELYFKRLDQAPYKPKGMVIG----TTPRVLTLSNGMGDPNREP 718
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
++V +D G +++ G T N+ +S++ E L + + QP V+ + +
Sbjct: 719 VSWVSMDEDGRILE---HGTFT----NLARDESQR---EALAELVRRRQPDVIGISGFSA 768
Query: 533 SCTSLKDDIYEIIFK--MV---EEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
L D+ ++ + +V + P + D L ++ ++ + RLY++S + P
Sbjct: 769 DTHRLIKDVEGLVSEKGLVGPEYDDPETNEYRSDLLEVIVINDEVARLYKDSPRAVADHP 828
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ +AL RY+QNP+ A L G+++ S ++ P + +L + +E MVD
Sbjct: 829 SLNPMTRYCIALARYMQNPMKEYAAL---GKDVTSLQIHPYQQYLPQAKLLKHLETAMVD 885
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG--- 704
+ N VG+DIN+A+ L +++GLGPRKA L + + + G + T +D +
Sbjct: 886 MVNLVGVDINVAMQDANTAHLLPYVAGLGPRKAQLLIKGINKNGGVVTSRDELVGDPERH 945
Query: 705 ----LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDI 760
LG +V+ N FL + S D LD+TRIHPE Y LA+++A + D
Sbjct: 946 KLPVLGPRVWNNCASFLFIEYEPTNPES----DPLDNTRIHPEDYDLARKVAADALGLDE 1001
Query: 761 EG-DLNDDEDALEMAIEHV--RDRPDLLKTYLLDRHIKEKKRE---NKRETLYLIRRELI 814
E DE+ + + D D + +L+ + ++ +RE KR TL IR EL
Sbjct: 1002 EDVKAETDENGAGAIVRKLFKDDEQDKVNELILEEYAEQLEREYQQRKRATLETIRAELQ 1061
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+++ R +++ + D+ F M++GE D+L EG +V A VR V+ AI L+ G+ G +
Sbjct: 1062 VPYEELRKKFESLTVDQVFTMLTGENRDSLCEGMIVAANVRVVKDDFAIVKLDCGIEGRI 1121
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
D S +R S + D LH G ++ K+ + + + L R+ EMR +H +
Sbjct: 1122 ESHDVS--YRHS-IKDVLHVGQVVQAKLIDLNRKEFVSKLSMRDEEMRRPFRRHFDHGRD 1178
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ + R + +E K+K + +R++ HP F+ + +A + L ++ GE +IR
Sbjct: 1179 QW-DYRKEDEDREELREKDKSTGR---AQRVVNHPLFKPFNSTQAEEYLGSQPSGEVVIR 1234
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVD 1054
PSS+G +L +T KV DGV+ H D++E K+++ +G+ L++G+ T++DLDE++
Sbjct: 1235 PSSKGNDHLAVTWKVADGVFQHVDVLELQKENE-----FAVGRVLRVGKYTYQDLDELIV 1289
Query: 1055 RYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++ + + ++ KF+KGS+ E ++ L P R Y F I +HPG F L +
Sbjct: 1290 DHVKAMAKKVDELMQCDKFQKGSRNETEKWLTTYMDANPNRSTYAFCIDTKHPGYFFLCF 1349
Query: 1115 IRSTNPHHEY--IGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
S N + + P F+ K + D+ L F+
Sbjct: 1350 KASRNSRVNAWPVRVIPHAFELMKSQYPDVRALCNGFK 1387
>sp|Q2U561|SPT6_ASPOR Transcription elongation factor spt6 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=spt6 PE=3 SV=1
Length = 1422
Score = 306 bits (785), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 298/1175 (25%), Positives = 530/1175 (45%), Gaps = 108/1175 (9%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R +E S+++ L+ L ++PFI
Sbjct: 299 EQFREEAAWISN------LMLLKKRIEPELREPFQRSVAK-----VLEFLVTDDWEVPFI 347
Query: 81 AMYRKEECLSLLK-DLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKSA 139
+RK+ + +K +E + D + R L LW I D D K+ L ++++
Sbjct: 348 FQHRKDYMIHAVKAPVEGAGEDGDASQYTVRAEKLLNMTDLWDIFDHDLKFKALVEKRNT 407
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS-LEAAETEREVDDVDLKFNLHFPPG 198
+Q + YD + N + DS+ + L AA T E+ DV + +HF
Sbjct: 408 IQ------------KTYDNLQSLFN--VSDSVVEEMLPAAVTMEELQDV--QDYIHFQYA 451
Query: 199 EVGVD--------EGQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG 248
D G+ R K S+K + + + FG +++ E
Sbjct: 452 SQLRDMTLMNSDVNGETHRRKASSKTFFERVRNGKAYGLVRAFGITADAFAQNALKEGRR 511
Query: 249 DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV 308
EDP E PEEMA F F+++ V++ A+ + A EI P +RK +R + N V
Sbjct: 512 QYTEDPAERPEEMADGFVDNDFSNASHVIKAAKSLFAEEIVMSPKMRKVIRQAYYMNGAV 571
Query: 309 STCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKLP-- 364
T G ID H + K+LR + L +L + KAEEE L++V ++
Sbjct: 572 DCFRTEKGLRRIDEQHPYYEFKYLRNQQLSDIARRPELYLRMLKAEEEGLVEVKVRFENF 631
Query: 365 EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGR 422
+ +L+ D + SD S+ A WN R +L AL L+ VKE +
Sbjct: 632 DQFRQRLYPDIE----SDNYSEIADGWNRSRRDVLDMALGKLERLINRSVKEN---IRQE 684
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGP---GKPETTFVMLD 479
++ + E + ++ PY+ K + PRVLA G G+ + ++
Sbjct: 685 CENHVAKECRETFSQRLDQAPYKPKGMVLG----TVPRVLALSTGSGVVGREPIHWAYIE 740
Query: 480 SSGEVVDVLFTGCLTL--RSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSL 537
G V++ L++ R +N+ D + D E ++ + +P V+ + ++ L
Sbjct: 741 EDGRVLENGKFVDLSIGDRDRNIPDGK----DVEAFVELVDRRRPDVIGVSGMSPETRRL 796
Query: 538 KDDIYEIIFK-------MVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQK 590
+ E++ K ++H ++ D L ++ ++ + RLY++S + P
Sbjct: 797 YKLLAEVVDKKDLRGAPYTDDHDEEIS---DRLEVIIVNDEVARLYQHSERAKKDHPSFA 853
Query: 591 GNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTN 650
VAL +YLQ+PL A+L GR+I+S + P + +T + +E +VD+ N
Sbjct: 854 PLTHYCVALAKYLQSPLKEYASL---GRDIVSIQFKPGQQLVTQELLLKQLETALVDMVN 910
Query: 651 QVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAH----GL 705
VG+DIN A+ L ++ GLGPRKAA L + + + G + R + + + +
Sbjct: 911 LVGVDINEAVTDSSTANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVNAQYPAM 970
Query: 706 GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLN 765
G KV+ N FL + + D LD+TR+HPE Y +A+++A + D E D+
Sbjct: 971 GVKVWNNCASFLYIDFENVDPDA----DPLDNTRVHPEDYDIARKMAADALELD-EEDIK 1025
Query: 766 DDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
+ D ++ E +DR + L +++ + KR TL IR EL ++
Sbjct: 1026 AETDENGTGAIVRKLFREEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYE 1085
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
+ R QY S D+ F M++GET DTLAEG VV +++RV L+ G+ ++ + +
Sbjct: 1086 ELRKQYVFLSTDDIFTMLTGETSDTLAEGMVVPISIKRVSDDHIDGKLDCGIDALVPESE 1145
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHE 938
+D + D + ++ KI + + + + RE ++ + N
Sbjct: 1146 LTDRY-DIPVRALYSPHQTVSAKILFLNRKNFTCNVSLREEQVS----RPVSNTQDRLRG 1200
Query: 939 ERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSR 998
E RQ +Q++ +++ R+I HP F+ + +A + L ++ G+ +IRPSS+
Sbjct: 1201 EWDERQEQQDRESLQEKTQSGGRTMRVIKHPLFRPFNSTQAEEFLGSQSRGDVVIRPSSK 1260
Query: 999 GPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRYI 1057
G +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD+++ ++
Sbjct: 1261 GHDHLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRYTYSDLDDLIFNHV 1315
Query: 1058 DPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRS 1117
+ + M+ + K++ G+K L P R Y F I +H G F L +
Sbjct: 1316 KAMAKKVDEMMLHEKYQDGTKDATYSWLETYTKANPKRSAYAFCIDPKHAGYFFLCFKAG 1375
Query: 1118 TNP--HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
N H + + P+G++ ++ + D+ L F+
Sbjct: 1376 ENARLHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1410
>sp|Q5B7Q7|SPT6_EMENI Transcription elongation factor spt6 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=spt6 PE=3 SV=2
Length = 1417
Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 302/1176 (25%), Positives = 535/1176 (45%), Gaps = 117/1176 (9%)
Query: 25 DESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYR 84
+E+ WI N L L +R +E S+++ L+ L ++PFI +R
Sbjct: 297 EEAAWIAN------LMLLKKRLEPELREPFQRSVAK-----VLEFLVTDDWEVPFIFQHR 345
Query: 85 KEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVL-----WAIHDLDKKWLLLQKRKSA 139
K+ + +K VN + DD T+K K+L W I D D K+ L ++++
Sbjct: 346 KDYMIHTVK----VPVNGASADDSSSQYTIKAEKLLNMTDLWDIFDYDLKFKALVEKRNT 401
Query: 140 LQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS-LEAAETEREVDDVDLKFNLHFPPG 198
+Q + YD R + + D I + L A T E+ D+ + LHF
Sbjct: 402 IQ------------KTYDNIRSVFSVE--DPIVEEMLPIATTMEELQDI--QDYLHFQYA 445
Query: 199 EV--------GVDEGQYKRPKRSTK--YSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMG 248
G G+ +R K T+ + + + + FG +++ E
Sbjct: 446 SQIRDLTLTNGDTNGEVQRRKALTRNFFERVRNSKAYGLVRAFGITADAFAQNALKEGRR 505
Query: 249 DELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVV 308
ED E PE+MA FN+S VL+ A+ M A EI P +RK +R + N V
Sbjct: 506 QYTEDASERPEDMADGLVDNDFNNSSQVLKAAKGMFAEEIVMSPKMRKVIRQAYYMNGAV 565
Query: 309 STCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQ--KAEEEKLLQVTIKLP-- 364
T G ID H + K+LR++ L + L ++ KAEEE L++V ++
Sbjct: 566 DCFRTEKGLRRIDEQHPYYEFKYLRDQQLSDIARSPELFLRMLKAEEEGLIEVKVRFENF 625
Query: 365 EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLMSGR 422
E+ +L+ + + SD S+ A WN R + AL ++ VKE +
Sbjct: 626 ENFRKRLYPNIE----SDNYSELADSWNRLRREAVDLALGKLERVINRSVKEN---IRQE 678
Query: 423 AKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFVMLD 479
++ + E +A ++ PY+ K + PRVLA G G + + ++
Sbjct: 679 CENHVAKECREAFSQRLDQAPYKPKGMILG----TVPRVLALSTGTGIIGRAPIHWAYVE 734
Query: 480 SSGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLK 538
G V++ G T S +D+ + D E L++ + +P V+ G +S + +
Sbjct: 735 EDGRVLE---NGKFTDLSLGDKDRGIADGKDLEALVELVNRRRPDVI--GVSGMSPETRR 789
Query: 539 DDIYEIIFKMVEE-------HPRDVGHEM-DELSIVYGDESLPRLYENSRISSDQLPGQK 590
+Y+++ ++V+ + D E+ D L +V ++ + RLY+NS + P
Sbjct: 790 --LYKLLTEIVDAKDLRGALYTDDRDEEVSDRLEVVIVNDEVARLYQNSDRAKKDHPSFA 847
Query: 591 GNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTN 650
V L +YLQ+PL A+L GR+I+S + P + + + +E +VD+ N
Sbjct: 848 PLTHYCVGLAKYLQSPLKEYASL---GRDIVSIQFKPGQQLVAQELLLKQLETALVDMVN 904
Query: 651 QVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHG-----L 705
VG+DIN A+ L ++ GLGPRKAA L + + G + + + G +
Sbjct: 905 LVGVDINEAVSDPATANLLPYVCGLGPRKAAHLLKIVNMTGGVVNSRFSLLGVGVQYPAM 964
Query: 706 GKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLN 765
G KV+ N+ FL + A S D LD+TR+HPE Y +A+++A + D E D+
Sbjct: 965 GVKVWNNSASFLYIDYESADADS----DPLDNTRVHPEDYDIARKMAADALELD-EEDIK 1019
Query: 766 DDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQ 818
+ D ++ E +DR + L +++ + KR TL IR EL ++
Sbjct: 1020 AETDENGPGAIVRKLFREDAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYE 1079
Query: 819 DWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKED 878
+ R + S D+ F M++GET TLAEG VV +++ ++ L+ G+ ++ + +
Sbjct: 1080 ELRKHFVFLSTDDIFTMLTGETAQTLAEGMVVPISIKSIRDDHIEGKLDCGVDALVGESE 1139
Query: 879 YSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEM-RNNRYQHCQNLDPYYH 937
+D + D + + K+ + + + + RE ++ R +R D +
Sbjct: 1140 MTDRY-DIPVRAIYSLHQTVPAKVMFLNRKTFTCNVSLREEQVSRPSR----PAADRAHA 1194
Query: 938 EERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSS 997
E RQ EQ++ E + R+I HP F+ + +A++ L ++ G+ +IRPSS
Sbjct: 1195 GEWDYRQEEQDREALEAKTQDGGRTMRVIKHPLFRPFNSTQAVEFLGSQSRGDVVIRPSS 1254
Query: 998 RGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVVDRY 1056
+GP +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD+++ +
Sbjct: 1255 KGPDHLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRFTYSDLDDLIFNH 1309
Query: 1057 IDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYI- 1115
+ + + M+ + K+++GSK + L P R Y F I +H G F L +
Sbjct: 1310 VKAMAKKVDEMMLHEKYQEGSKDSTYQWLETYTKANPRRSAYAFCIDPKHAGYFFLCFKA 1369
Query: 1116 -RSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
H + + P+G++ ++ + D+ L F+
Sbjct: 1370 GEHAQVHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1405
>sp|P0CR73|SPT6_CRYNB Transcription elongation factor SPT6 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SPT6 PE=3 SV=1
Length = 1506
Score = 300 bits (768), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 304/1216 (25%), Positives = 525/1216 (43%), Gaps = 138/1216 (11%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+++ +Q L++P++ Y K + SLL++ Q+ V D+ LW ++ L
Sbjct: 349 LNMMFVQHLEVPYLWHY-KRDVFSLLENQGQSSVLFLERDE------------LWQVYVL 395
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
+++ + +R + + K ++R+ E L + S+EAA E
Sbjct: 396 GQRYRAIHERNEQTRQQWGKI---KARKGDIEDEYFTKGLLGKACVASIEAAGEGDEWLA 452
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS-LE 245
++ E DE K P+R+ + + + ++ FG + ++ +
Sbjct: 453 YHYASDIKAIKEEEAFDEVSKKLPERAER-EDIRRGRIMKLVEAFGIDANKVASSFQDVH 511
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
+ +P + P E+A F A ++S + L A + E+S +P +R+ R FMD
Sbjct: 512 GQPAPVMNPDKMPLELADEFTGAAYSSPEQALSAASFVLVQELSKDPAIRQQARD-FMDT 570
Query: 306 A-VVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA-QWLLIQKAEEEKLLQVTIKL 363
+V+ T G S ID +H + K+L KP+ F D+ Q++ + KAEEE L+ + +
Sbjct: 571 CGLVTVNATDRGMSVIDQYHLYYNFKFLTNKPVPDFRDSPQFVHMLKAEEEGLINIAFDI 630
Query: 364 PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
ED L S+ + A WN+ R + + L+P K + + +A
Sbjct: 631 REDMLASFTDALIRCCRSNDYGEIASAWNEVRMEVCNTLVKKHLMPMASKWIKEHLRTQA 690
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG--KPETTFVMLDSS 481
+ ++ + L +V+V PY + + P VLA G G + VMLD
Sbjct: 691 EEYIAERCREELELRVNVRPYASSGME----QGETPSVLAITNGKGDIRDAVMAVMLDDE 746
Query: 482 GEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
G V R+Q D + D+ ++ + +P VVV+G + LKD
Sbjct: 747 GNV-----------RTQTKFDNLRDEEDKTMFIELLEKRKPKVVVIGGFSAQTARLKDAA 795
Query: 542 YEIIFKMVEE-----------HPRDVGH-----EMDE------LSIVYGDESLPRLYENS 579
I + E +P G E DE + +++ +++ RLY +S
Sbjct: 796 LVAIRQHAIELLGQNPPVSDAYPDHEGFQYAMAEYDEKLKAHLIPLIFVNDATARLYMSS 855
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
+ + P N + A+ L RY QNPL C G+ I S L P EK
Sbjct: 856 EEAEKEHPNLPLNGRYALGLARYAQNPLN---AYCKLGKHIASVTFMEHHQKLIPQEKLL 912
Query: 640 M-IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
+E+ +V+ +G++IN + +Q A L +I+GLGPRKA ++ + + GA+ R
Sbjct: 913 YHLERGLVNSVCFMGIEINSCVADPYQRAMLPYIAGLGPRKADAVIYGIQKHGALINRMA 972
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSG-----QAASSSQFIDLLDDTRIHPESYGLAQELAK 753
F G +F N GFL + +A + + D LD TRIHPE+Y AQ++
Sbjct: 973 FTDLGLFGPTIFENTAGFLTIESDLKDMMLEAENPQEQPDPLDMTRIHPENYEFAQKMC- 1031
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVRDR--PDLLKTYLLDR----------------HIK 795
+DAL++ +E V DR ++++T +LD +++
Sbjct: 1032 --------------QDALDLDVEDVADRHKSEVVQTLMLDDKRGKKLGELNLDDFAFNLQ 1077
Query: 796 EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVR 855
+ NKR TL I ELI D R + P+ E M++GETE T+ G V ATVR
Sbjct: 1078 RQGEGNKRHTLGEIVSELIRYRSDRRPAFYVPTDWEIVTMVTGETERTVGRGLKVTATVR 1137
Query: 856 RVQGQRAICVLESGLAGMLMKEDYSDDWRDSELS---DKLHEGDILTCKIKSIQKNRYQV 912
+ R C LESGL +L + DY D + ++ + + + + R+QV
Sbjct: 1138 KAISARVFCQLESGLDAVL-ERDYVADEDQAPVTSCDEVFKPRQAIKGVVIMPEPARFQV 1196
Query: 913 FLVCRESEMRNNRYQHCQNLDPYYHEERSS--RQSEQEKARKEKELAKKHFKERLIVHPC 970
+ R S++R Q + P+ EE +S R+ E A K+ + +R++ HP
Sbjct: 1197 RISTRPSDLR----QGVDFVQPFKDEEYNSKDRRDAAEAATAAKKQRRAGKVQRIVNHPN 1252
Query: 971 FQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIK 1030
+ + + +A + L+++ G+ +IRPSS+GP + +T KV + VY H D+ E K ++
Sbjct: 1253 WHVLNSGQAEQFLASQHRGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNE--- 1309
Query: 1031 SLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEK 1089
+G+ L + G+ + DLD+++ ++ + + K++ + E+D L+
Sbjct: 1310 --YSLGRILMVSGQYRYSDLDDLIINHVKATARKFDEIQMHEKYK--PEHELDAFLKNYV 1365
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPK-----GFKFRKRMFEDIDR 1144
P R +YGF + + PG L ++ I +P +K + +
Sbjct: 1366 QAHPGRSIYGFSVDSDRPGYLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGVTE 1425
Query: 1145 LVAYFQRHIDDP---QGDSAPSIRSVAAMVPM----RSPANGGSTASAGS---GWGGSTN 1194
L F+ + QG + PM R+PA G T + GS G T
Sbjct: 1426 LSNAFKMQYSEKLAEQGHQGKTPGIYLGKTPMHLGGRTPALGSRTPAMGSRTPALGSRTP 1485
Query: 1195 EGGWNRDRSSTPGSRT 1210
G R+ GSRT
Sbjct: 1486 ALG---SRTPALGSRT 1498
>sp|P0CR72|SPT6_CRYNJ Transcription elongation factor SPT6 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SPT6 PE=3 SV=1
Length = 1506
Score = 300 bits (768), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 304/1216 (25%), Positives = 525/1216 (43%), Gaps = 138/1216 (11%)
Query: 67 LDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDL 126
L+++ +Q L++P++ Y K + SLL++ Q+ V D+ LW ++ L
Sbjct: 349 LNMMFVQHLEVPYLWHY-KRDVFSLLENQGQSSVLFLERDE------------LWQVYVL 395
Query: 127 DKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDD 186
+++ + +R + + K ++R+ E L + S+EAA E
Sbjct: 396 GQRYRAIHERNEQTRQQWGKI---KARKGDIEDEYFTKGLLGKACVASIEAAGEGDEWLA 452
Query: 187 VDLKFNLHFPPGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS-LE 245
++ E DE K P+R+ + + + ++ FG + ++ +
Sbjct: 453 YHYASDIKAIKEEEAFDEVSKKLPERAER-EDIRRGRIMKLVEAFGIDANKVASSFQDVH 511
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
+ +P + P E+A F A ++S + L A + E+S +P +R+ R FMD
Sbjct: 512 GQPAPVMNPDKMPLELADEFTGAAYSSPEQALSAASFVLVQELSKDPAIRQQARD-FMDT 570
Query: 306 A-VVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDA-QWLLIQKAEEEKLLQVTIKL 363
+V+ T G S ID +H + K+L KP+ F D+ Q++ + KAEEE L+ + +
Sbjct: 571 CGLVTVNATDRGMSVIDQYHLYYNFKFLTNKPVLDFRDSPQFVHMLKAEEEGLINIAFDI 630
Query: 364 PEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRA 423
ED L S+ + A WN+ R + + L+P K + + +A
Sbjct: 631 REDMLASFTDALIRCCRSNDYGEIASAWNEVRMEVCNTLVKKHLMPMASKWIKEHLRTQA 690
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG--KPETTFVMLDSS 481
+ ++ + L +V+V PY + + P VLA G G + VMLD
Sbjct: 691 EEYIAERCREELELRVNVRPYASSGME----QGETPSVLAITNGKGDIRDAVMAVMLDDE 746
Query: 482 GEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
G V R+Q D + D+ ++ + +P VVV+G + LKD
Sbjct: 747 GNV-----------RTQTKFDNLRDEEDKTMFIELLEKRKPKVVVIGGFSAQTARLKDAA 795
Query: 542 YEIIFKMVEE-----------HPRDVGH-----EMDE------LSIVYGDESLPRLYENS 579
I + E +P G E DE + +++ +++ RLY +S
Sbjct: 796 LVAIRQHAIELLGQNPPVSDAYPDHEGFQYAMAEYDEKLKAHLIPLIFVNDATARLYMSS 855
Query: 580 RISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYG 639
+ + P N + A+ L RY QNPL C G+ I S L P EK
Sbjct: 856 EEAEKEHPNLPLNGRYALGLARYAQNPLN---AYCKLGKHIASVTFMEHHQKLIPQEKLL 912
Query: 640 M-IEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKD 698
+E+ +V+ +G++IN + +Q A L +I+GLGPRKA ++ + + GA+ R
Sbjct: 913 YHLERGLVNSVCFMGIEINSCVADPYQRAMLPYIAGLGPRKADAVIYGIQKHGALINRMA 972
Query: 699 FVTAHGLGKKVFVNAVGFLRVRRSG-----QAASSSQFIDLLDDTRIHPESYGLAQELAK 753
F G +F N GFL + +A + + D LD TRIHPE+Y AQ++
Sbjct: 973 FTDLGLFGPTIFENTAGFLTIESDLKDMMLEAENPQEQPDPLDMTRIHPENYEFAQKMC- 1031
Query: 754 EVYNRDIEGDLNDDEDALEMAIEHVRDR--PDLLKTYLLDR----------------HIK 795
+DAL++ +E V DR ++++T +LD +++
Sbjct: 1032 --------------QDALDLDVEDVADRHKSEVVQTLMLDDKRGKKLGELNLDDFAFNLQ 1077
Query: 796 EKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVR 855
+ NKR TL I ELI D R + P+ E M++GETE T+ G V ATVR
Sbjct: 1078 RQGEGNKRHTLGEIVSELIRYRSDRRPAFYVPTDWEIVTMVTGETERTVGRGLKVTATVR 1137
Query: 856 RVQGQRAICVLESGLAGMLMKEDYSDDWRDSELS---DKLHEGDILTCKIKSIQKNRYQV 912
+ R C LESGL +L + DY D + ++ + + + + R+QV
Sbjct: 1138 KAISARVFCQLESGLDAVL-ERDYVADEDQAPVTSCDEVFKPRQAIKGVVIMPEPARFQV 1196
Query: 913 FLVCRESEMRNNRYQHCQNLDPYYHEERSS--RQSEQEKARKEKELAKKHFKERLIVHPC 970
+ R S++R Q + P+ EE +S R+ E A K+ + +R++ HP
Sbjct: 1197 RISTRPSDLR----QGVDFVQPFKDEEYNSKDRRDAAEAATAAKKQRRAGKVQRIVNHPN 1252
Query: 971 FQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIK 1030
+ + + +A + L+++ G+ +IRPSS+GP + +T KV + VY H D+ E K ++
Sbjct: 1253 WHVLNSGQAEQFLASQHRGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNE--- 1309
Query: 1031 SLVGIGKTLKI-GEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEK 1089
+G+ L + G+ + DLD+++ ++ + + K++ + E+D L+
Sbjct: 1310 --YSLGRILMVSGQYRYSDLDDLIINHVKATARKFDEIQMHEKYK--PEHELDAFLKNYV 1365
Query: 1090 AEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIG-----LYPKGFKFRKRMFEDIDR 1144
P R +YGF + + PG L ++ I + P +K + +
Sbjct: 1366 QAHPGRSIYGFSVDSDRPGYLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGVTE 1425
Query: 1145 LVAYFQRHIDDP---QGDSAPSIRSVAAMVPM----RSPANGGSTASAGS---GWGGSTN 1194
L F+ + QG + PM R+PA G T + GS G T
Sbjct: 1426 LSNAFKMQYSEKLAEQGHQGKTPGIYLGKTPMHLGGRTPALGSRTPAMGSRTPALGSRTP 1485
Query: 1195 EGGWNRDRSSTPGSRT 1210
G R+ GSRT
Sbjct: 1486 ALG---SRTPALGSRT 1498
>sp|Q4WWH6|SPT6_ASPFU Transcription elongation factor spt6 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=spt6
PE=3 SV=1
Length = 1420
Score = 300 bits (767), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 300/1180 (25%), Positives = 529/1180 (44%), Gaps = 118/1180 (10%)
Query: 21 ESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFI 80
E +E+ WI N L L +R +E S+++ L+ L ++PFI
Sbjct: 298 EQFREEAAWIAN------LMLLKKRIEPELREPFQRSVAK-----VLEFLVTDDWEVPFI 346
Query: 81 AMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVL-----WAIHDLDKKWLLLQK 135
+RK+ + K + + + T+K K+L W I D D K+ L +
Sbjct: 347 FQHRKDYMIHATKVPVAGAPADGDTSQY----TIKAEKLLNMTDLWDIFDHDLKFRALVE 402
Query: 136 RKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKS-LEAAETEREVDDVDLKFNLH 194
+++ +Q + YD + N + DS+ + L A T E+ DV +
Sbjct: 403 KRNTIQ------------KTYDNLQSLFN--VNDSVVQDMLSTAVTMEELQDVQDYVHFQ 448
Query: 195 FPP---------GEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE 245
+ GE D + K RS + + + FG +++ E
Sbjct: 449 YASQLRDINLMNGEANGDTHRRKATGRSF-FERVRNGKAYGLVRAFGITADAFAQNALKE 507
Query: 246 KMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDN 305
EDP E PEEMA +F F+++ VL+ A+ + A EI P +RK +R + N
Sbjct: 508 GRRQYTEDPAERPEEMADSFIDNDFSNASHVLKAAKALFAEEIVMSPKMRKVIRQAYYMN 567
Query: 306 AVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQVTIKL 363
V T G ID H + K+LR + L + +L + KAEEE L++V ++
Sbjct: 568 GAVDCFRTEKGLRRIDEQHPYYEFKYLRNQQLSDIARQPELYLRMLKAEEEGLVEVKVRF 627
Query: 364 P--EDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNF--LLPSMVKEARSLM 419
+ +L+ D + SD S+ A WN R +L AL L+ VKE +
Sbjct: 628 ENFDHFRQRLYPDIE----SDNYSEIADAWNRTRREVLDMALGKLERLINRSVKEN---I 680
Query: 420 SGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPG---KPETTFV 476
++ + E +A ++ PY+ K + PRVLA G G + +
Sbjct: 681 RQECENHVAKECREAFSQRLDQAPYKPKGMVLG----TVPRVLAMSTGTGIVGRDPIHWA 736
Query: 477 MLDSSGEVVDVLFTGCLTLRSQNVRDQQ-SKKNDQERLLKFMMDHQPHVVVLGAVNLSCT 535
++ G V++ G S RD+ D E L++ + +P V+ G +S
Sbjct: 737 YVEEDGRVLE---NGKFVDLSIGDRDRSIPDGKDVEALIELLERRRPDVI--GVSGMSPE 791
Query: 536 SLKDDIYEIIFKMVEEHPRDVGHEMDE--------LSIVYGDESLPRLYENSRISSDQLP 587
+ K +Y+++ ++VE+ DE L +V ++ + RLY++S + P
Sbjct: 792 TRK--LYKLLTELVEKKDLRGATYTDERDEEISDPLEVVIVNDEVARLYQHSERAKKDHP 849
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
VAL +YLQ+PL A+L GR+I+S + + + + +E +VD
Sbjct: 850 SFGPLTHYCVALAKYLQSPLKEYASL---GRDIVSIQFKRGQQLVAQELLLKQLETALVD 906
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHG-- 704
+ N VG+DIN A+ L ++ GLGPRKAA L + + + G + R + + +
Sbjct: 907 MVNLVGVDINEAVTDPATANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVNAQY 966
Query: 705 --LGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEG 762
+G KV+ N FL + + D LD+TR+HPE Y +A+++A + D E
Sbjct: 967 PAMGVKVWNNCASFLFIDFENADPDA----DPLDNTRVHPEDYDIARKMAADALELD-EE 1021
Query: 763 DLNDDED-------ALEMAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIH 815
D+ + D ++ + +DR + L +++ + KR TL IR EL
Sbjct: 1022 DIKAETDENGPGAIVRKLFRDEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQ 1081
Query: 816 GFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLM 875
+++ R Q+ S D+ F M++GET DTLAEG VV +++R+ L+ G+ ++
Sbjct: 1082 PYEELRKQFALLSTDDVFTMLTGETSDTLAEGMVVPISIKRITDDHIDGKLDCGVDVLVP 1141
Query: 876 KEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPY 935
+ + +D + D + L K+ + K + + RE ++ + ++
Sbjct: 1142 ESELTDRY-DIPVRALYSLHQTLPAKVLFLNKKNFLCNVSLREEQVSRPTPRPRDHMRGE 1200
Query: 936 Y--HEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESII 993
+ +E R+ QEK + + R+I HP F+ + +A + L ++ G+ +I
Sbjct: 1201 WDDRQEAKDREMLQEKTQSGGRVM------RVIKHPLFRPFNSTQAEEFLGSQSRGDVVI 1254
Query: 994 RPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEV 1052
RPSS+GP +L +T KV DG++ H D++E K+++ +G+TLK+ G T+ DLD++
Sbjct: 1255 RPSSKGPDHLAVTWKVADGIFQHIDVLELDKENE-----FSVGRTLKVGGRYTYSDLDDL 1309
Query: 1053 VDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFIL 1112
+ ++ + + M+ + K+++GSK L P R Y F I +HPG F L
Sbjct: 1310 IFNHVKAMAKKVDEMMLHEKYQEGSKDATYSWLNTYTKANPRRSAYAFCIDPKHPGYFQL 1369
Query: 1113 TYIRSTNP--HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ N H + + P+G++ ++ + D+ L F+
Sbjct: 1370 CFKAGENAQLHSWPVKVIPQGYELQRNPYPDMRALCNGFK 1409
>sp|Q4HYQ4|SPT6_GIBZE Transcription elongation factor SPT6 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SPT6 PE=3
SV=1
Length = 1408
Score = 293 bits (749), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 293/1179 (24%), Positives = 525/1179 (44%), Gaps = 105/1179 (8%)
Query: 10 RKALAGPPTDGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDL-SISRDDIMRFLD 68
RK E +E+ WI NQL + ++G S DL S + + L+
Sbjct: 284 RKTFKSLQLTAEQFKEEARWITNQL-------WPKKGLAS-----DLQSPFGKAVGKVLE 331
Query: 69 LLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDK 128
+ ++++P++ +RK+ L K N + D + L LW I +LD
Sbjct: 332 FFIVDEVEVPYVFQHRKDYLLHTRKTRNPNRDDPDAPEYVISADKLLNQDDLWKILELDI 391
Query: 129 KWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVD 188
K+ +++AL+ + + + + ++ + D + + A T E+ D
Sbjct: 392 KFRSFVDKRNALE-----------KTVDNLKGMEIHDAMVDEM---IPEATTMEELQD-- 435
Query: 189 LKFNLHFPPGEVGVDEGQY-------KRP-KRSTKYSSCSKAGLWEVASKFGYSSEQLGL 240
L+ LHF G+ D KRP +S + + +G S++QL
Sbjct: 436 LQDYLHFQYGQQLKDLAALAGNLSLTKRPGSKSNLLERVRQGKAYGFVRAYGISADQLAK 495
Query: 241 QLSLEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRS 300
+D + P ++A + +F++ V+ AR M + E+ P +RK+ R+
Sbjct: 496 NALRHGKKVTPDDDAQYPMDLADSLIDDVFSTGDQVISAARQMYSEELFASPRMRKHFRN 555
Query: 301 IFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKF--EDAQWLLIQKAEEEKLLQ 358
+ A +S T G ID H + +K+L+ + + + +L + KAEEE L
Sbjct: 556 SYYQAAEISCRRTEKGLRRIDDSHPYYEIKYLQNQAIADLVHQPELFLKMMKAEEEGL-- 613
Query: 359 VTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDA---LDNFLLPSMVKEA 415
VTIKL + + + S+ S A+ W ++R+ +L A L+ + ++ +
Sbjct: 614 VTIKLDMPARYDFRQHLYQEFESENFSDRAEQWREERKKVLDLAYPKLEKIIAKNVKEVI 673
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWG---PGKPE 472
R+ EY K ++ PY+ K + PRVL G P +
Sbjct: 674 RTFCQDEVLKMCREEYAK----RLDQAPYKPKGMILG----TTPRVLVLSNGMSDPARDP 725
Query: 473 TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL 532
+ ++ G V++ G L RD++ + E + + +P V+ + +
Sbjct: 726 ICWAWVEEDGRVIEQGKLGNLA------RDERQR----EEFEELVKRRRPDVIGVSGWSA 775
Query: 533 SCTSLKDDIYEIIFKM-----VEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLP 587
T L D+ ++ + E P + + L +V ++ + RLY++S + + P
Sbjct: 776 ETTKLVRDLEGLVNEKGLMGPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRALAEHP 835
Query: 588 GQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVD 647
+ VAL RY+QNP+ A L G+++ S P +N L D+ ++ MVD
Sbjct: 836 SLNPITRYCVALARYMQNPMKEYAAL---GKDVSSLSYHPCQNLLPADKLAKYLDSAMVD 892
Query: 648 VTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL-VRAGAIFTRKDFVTAHGLG 706
+ N G+DIN A++ + L ++SGLGPRKA S+ +++ GA+ TR + V G
Sbjct: 893 MVNLCGVDINEAMNDTYTANLLPYVSGLGPRKATSVIKAINANGGAVGTRDELVGDPDSG 952
Query: 707 K------KVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAK---EVYN 757
K +V+ N FL + SS D LD+TR+HPE Y L +++A E+
Sbjct: 953 KLPVVGPRVWNNCASFLFIEYEATNPSS----DPLDNTRVHPEDYELGRKMAADALELDE 1008
Query: 758 RDIEGDLNDDEDALEMAIEHVRDRPDLLKTYLLDRHIKEKKR---ENKRETLYLIRRELI 814
D++G+ +++ + D D + +L+ + ++ +R + KR TL IR EL
Sbjct: 1009 EDVKGETDENGPGAIVRKLFKMDEQDKVNELVLEEYAEQLERNYSQRKRATLETIRAELQ 1068
Query: 815 HGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGML 874
+++ R + S E F M +GET+ TL EG +V VR V+ AI L+ G+ G +
Sbjct: 1069 APYEELRRNFALLSASEIFTMFTGETKHTLCEGMIVPVNVRVVKDDFAIVKLDCGIEGRV 1128
Query: 875 MKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDP 934
+ S S + + L G KI I + L RE +R Y+ NL
Sbjct: 1129 EGHEVS---HRSSIKEVLSSGQTSQAKILDINYKDFMAKLSMREDALRIP-YKRPINLGR 1184
Query: 935 YYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIR 994
+ ++E K+K + +R++ HP F+ +A + L ++ GE +IR
Sbjct: 1185 DGWDYVLEAADKEELREKDKTTGR---TQRVVKHPNFKPFNGLQAEEYLGSQPNGEVVIR 1241
Query: 995 PSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKI-GEDTFEDLDEVV 1053
PSS+G +L +T KV DGV+ H D++E K+ + +GK L++ G+ T+ DLDE++
Sbjct: 1242 PSSKGNDHLAVTWKVADGVFQHIDVLEMQKETE-----FAVGKLLRVGGKYTYTDLDELI 1296
Query: 1054 DRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILT 1113
++ + ++ ++ + K++ S+ E ++ L P R Y F I +HPG F L
Sbjct: 1297 VEHVKAMARKVEELMRHDKYQNRSRGETEKWLTTYIDANPNRSTYAFCIDTKHPGYFWLC 1356
Query: 1114 Y--IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ 1150
+ R+ + P+GF+ + + D+ L F+
Sbjct: 1357 FKASRAAKVIALPVRAIPQGFELKGYQYPDMRALCNGFK 1395
>sp|Q6BVE1|SPT6_DEBHA Transcription elongation factor SPT6 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SPT6 PE=3 SV=1
Length = 1439
Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 282/1226 (23%), Positives = 517/1226 (42%), Gaps = 135/1226 (11%)
Query: 19 DGESIVDESTWIYNQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIP 78
+GE + E W+ N L ++G+ S G ++ + + ++ + ++P
Sbjct: 294 EGEELKSEQGWVANILF------MEKQGSFS---GFLEEPFKEAVSKVVEFISKDVYEVP 344
Query: 79 FIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKRKS 138
FI +R++ L E+ N++ L + LW I LD ++
Sbjct: 345 FIWTHRRDFLLY------SEEIKNEDGSVTNSVHKLLFEDDLWRIFQLDIEY-------- 390
Query: 139 ALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPG 198
S Y+KR E +L + L D + K +++ ET + D+ N +
Sbjct: 391 --HSLYEKRVNIE--------KLIESLNLDDDLVKDVKSLETMVAIQDLQDYINFTYST- 439
Query: 199 EV----------GVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLS----- 243
E+ G+D K+ + + L++ + FG S+++ G +
Sbjct: 440 EIRKLYDDKETEGIDANITKKHSKYAIFERIKSNVLYDAVNAFGISAKEFGENVQDQSSK 499
Query: 244 -------LEKMGDELEDPKETPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRK 296
+ D +E P++ E + + + +F + L R A EI P +R
Sbjct: 500 KFEVPYRIHATDDHIESPEDLIERLCEDDEV-LFKDPKNALNAVRKTFAEEIFHNPKIRH 558
Query: 297 YVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL 356
VR+ F D A + T G AID+ +A +K+ + +L++ E E
Sbjct: 559 EVRTTFKDFASIRVAVTEKG-KAIDNHSPYADIKYAINRSPADLVRNPDVLLRMLEAEAA 617
Query: 357 LQVTIKLPEDSLNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVK-EA 415
V +K+ + F SDG S+ + WN +RE +L A L SMV
Sbjct: 618 GLVVVKVETKDYDSWFQCIFNCLKSDGSSEIFEKWNKEREFVLNMAFKR--LTSMVSMNT 675
Query: 416 RSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP---DEEAAPRVLACCWGPGKPE 472
+ + + + E + ++ P+ TP D+ P VLA +G G +
Sbjct: 676 KEDLRRECERLIASEVRRRFLARIDQAPF-------TPFGFDKGTKPNVLALSFGKGDFD 728
Query: 473 TTFV--MLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKF----MMDHQPHVVV 526
+ + L SG+V D F +RD++S+ +L +F + + +P V+V
Sbjct: 729 SAVIGAFLRESGKV-DEFFKS----EDNPIRDRESEDKFSGQLKEFFDKNLRNQKPDVIV 783
Query: 527 LGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELS---------IVYGDESLPRLYE 577
+ N L D + + +V +EL+ +++G L++
Sbjct: 784 VSGYNAISKKLFDSVKSFV------ETNNVTANTEELTDVQNPPLIQVIWGQSETATLFQ 837
Query: 578 NSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEK 637
NS + + + K V L RY+Q+PL +L G ILS + ++ D
Sbjct: 838 NSERARIEFSDKPTLAKYCVGLARYVQSPLLEYLSL---GEGILSLTFFEHQKLISTDLV 894
Query: 638 YGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVR--AGAIFT 695
IE VD+ N VG++IN AI + L +++GLGPRKA+ L R++ +
Sbjct: 895 MEAIESAYVDIINMVGVEINEAIRDPYIAQLLPYVAGLGPRKASGLLRNINSKLGSTLAN 954
Query: 696 RKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEV 755
R D + +F+N FL + + ++LLD TRIHPE Y LA+++A +
Sbjct: 955 RSDLIENELSTANIFINCSSFLNIPYDEGLSMRDSSVELLDATRIHPEDYDLARKMAADA 1014
Query: 756 YNRDIEGDLNDDEDALEMAIEHVRD---RPDLLKTYLLDRHIKEKKRENKRETLYLIRRE 812
+ D E D+ E+ + + ++D + D L + ++ K + K TL I+ E
Sbjct: 1015 LDLD-EEDMAHVEEQGGIIYQLMQDGVNKVDDLNLTAYGKELESKFGKKKYATLQSIKEE 1073
Query: 813 LIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRV-QGQRAICVLESGLA 871
L++ F++ R + E F+M++GET ++ +V TV +V Q R + A
Sbjct: 1074 LVNNFEEIRRSFHILESHEVFHMLTGETTESFTRNTIVPVTVNKVGQNFRDFENSKIKFA 1133
Query: 872 GMLMKEDYSDDWRDSELSD--KLHEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHC 929
+ + ++ + L +G ++ + + + E++++
Sbjct: 1134 KVTTSSFIQGNIEEASIPQGIDLAQGQVVQAVVLDAYYDSFTASFSLLEADIQ------- 1186
Query: 930 QNLDPYYHEERSSRQSEQEKARKEKELAKKH---FKERLIVHPCFQNVTADEAMKLLSAK 986
+ P +H++ E E+A K+KE+AK+ K R I HP F N + +A + L+ +
Sbjct: 1187 KGAAPKFHKDPLKWNFEAEQADKQKEMAKERAQLAKTRNIQHPLFHNFSYKQAEEFLAPQ 1246
Query: 987 EPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTF 1046
G+ ++RPSS+GP+YLT+T KV + ++ H I E + G+GK + +
Sbjct: 1247 AVGDCVLRPSSKGPNYLTVTWKVSNNLFQHLSIQENTQ---------GMGKEYIVEHKKY 1297
Query: 1047 EDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEH 1106
DLD+++ +++ + H+ M + KFR+G+ +EV+E L P Y F H+
Sbjct: 1298 ADLDQLIFQHVQAIAKHVDEMCRHPKFREGTMSEVNEWLESYTKANPKNSAYVFCFDHKA 1357
Query: 1107 PGTFILTYIRSTNPHHE--YIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSI 1164
PG F+L + + N ++ G++ + + + RL F++ A
Sbjct: 1358 PGWFLLLFKVNVNTPITTWHVKTECDGYRLKGFSYPSMLRLCNGFKQTFKSYVKGIADRS 1417
Query: 1165 RSVAAMVPMRSPANGGSTASAGSGWG 1190
RS +P N + AS G+G
Sbjct: 1418 RSTKP-----APVNNQAQASTYGGYG 1438
>sp|Q3MNT0|SPT6_CANAL Transcription elongation factor SPT6 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=SPT6 PE=3 SV=1
Length = 1401
Score = 257 bits (656), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 239/952 (25%), Positives = 429/952 (45%), Gaps = 88/952 (9%)
Query: 203 DEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEK-MGDEL-------EDP 254
+E Q ++ + Y + L++ +G ++++ G + + G E+ +DP
Sbjct: 442 EETQNRKHSKFALYERIRENVLYDAVKAYGITAKEFGENVQDQSSKGFEVPYRIHATDDP 501
Query: 255 KETPEEMASNF---KCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTC 311
E+P++M +F + R A EI P +R VRS + A +S
Sbjct: 502 WESPDDMIERLIQDDEVIFRDEKTARDAVRRTFADEIFYNPKIRHEVRSTYKLYASISVA 561
Query: 312 PTPDGDSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKL 371
T G ++ID+ FA +K+ + +L++ E E+L V IK+
Sbjct: 562 VTEKGRASIDAHSPFADIKYAINRSPADLIAKPDVLLRMLEAERLGLVVIKVETKDFANW 621
Query: 372 FSDCKEHYL-SDGVSKSAQLWNDQRELILKDALDNFLL-------PSMVKEARSLMSGRA 423
F DC + L SDG S ++ WN +R+ +L+ A+ + +E L++ +
Sbjct: 622 F-DCLFNCLKSDGFSDISEKWNQERQAVLRTAISRLCAVVALNTKEDLRRECERLIASKV 680
Query: 424 KSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFV--MLDSS 481
+ LL K+ P+ DI + VLA +G G ++ V +
Sbjct: 681 RHGLLA--------KIEQAPFTPYGFDIG----SKANVLALTFGKGDYDSAVVGVYIKHD 728
Query: 482 GEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDI 541
G+V F S+N + + K ++ F D P VVV+ N + L D
Sbjct: 729 GKVSR--FFKSTENPSRNRETEDAFKGQLKQF--FDEDETPDVVVVSGYNANTKRLHD-- 782
Query: 542 YEIIFKMVEEHPRDVGHEMDE-----LSIVYGDESLPRLYENSRISSDQLPGQKGNVKRA 596
+++ V E+ V E D+ + +++G + RLY+NS + + P + VK A
Sbjct: 783 --VVYNFVSEYGISVKSEFDDGSSQLVKVIWGQDETARLYQNSERAKKEFPDKPTLVKYA 840
Query: 597 VALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDI 656
++LGRYLQ+PL TL G +ILS + ++ D ++E VD+ N VG+DI
Sbjct: 841 ISLGRYLQDPLLEYITL---GDDILSLTFHEHQKLISNDLVKEVVESAFVDLVNAVGVDI 897
Query: 657 NLAIHREWQFAPLQFISGLGPRKAASLQRSLV-RAGAIFT-RKDFVTAHGLGKKVFVNAV 714
N ++ L+++ GLGPRKA+ + R++ + G++ T R + + +F+N
Sbjct: 898 NESVRDSRLAQTLKYVGGLGPRKASGMLRNIAQKLGSVLTTRSQLIEYELTTRTIFINCS 957
Query: 715 GFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALEMA 774
L++ + I++LD TRIHPE Y LA ++A + + D E +L++ ++
Sbjct: 958 AALKISLNKSINVKDFEIEILDTTRIHPEDYQLAMKMAADALDMDEESELHEKGGVIKEL 1017
Query: 775 IEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFY 834
+E+ + +LL I + + K +L IR ELI GF + R+ ++ + ++ F+
Sbjct: 1018 LENDPSKLNLLNLNDFANQIYKLTHKLKFRSLQAIRLELIQGFAEIRSPFRILTNEDAFF 1077
Query: 835 MISGETEDTLAEGRVVQATVRRVQGQ--------RAICVLESGLAGMLMKEDYSDDWRDS 886
+++GE L + V+ AT+ +V R + V+ L + E+ RD+
Sbjct: 1078 ILTGEKPQML-KNTVIPATITKVTKNHHDPYARIRGLKVVTPSLIQGTIDENAIP--RDA 1134
Query: 887 ELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESE----MRNNRYQHCQNLDPYYHEERSS 942
E ++ + + + L R + M+ + D +E
Sbjct: 1135 EYVQGQVVQAVVL----ELYTDTFAAVLSLRREDISRAMKGGVVREYGKWDYKAEDEDIK 1190
Query: 943 RQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSY 1002
R EKA++ +LAK R I HP ++N +A + L+ + G+ +IRPSS+G SY
Sbjct: 1191 R----EKAKENAKLAKT----RNIQHPFYRNFNYKQAEEYLAPQNVGDYVIRPSSKGASY 1242
Query: 1003 LTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVS 1062
LT+T KV + ++ H + E + G K + T+EDLD++ ++I +
Sbjct: 1243 LTITWKVGNNLFQHLLVEERSR---------GRFKEYIVDGKTYEDLDQLAFQHIQVIAK 1293
Query: 1063 HLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
++ M+ + KFR+G+ + V E L P Y F H+ PG F+L +
Sbjct: 1294 NVTDMVRHPKFREGTLSVVHEWLESYTRANPKSSAYVFCYDHKSPGNFLLLF 1345
>sp|Q6CVK3|SPT6_KLULA Transcription elongation factor SPT6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SPT6 PE=3 SV=1
Length = 1460
Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 232/941 (24%), Positives = 415/941 (44%), Gaps = 70/941 (7%)
Query: 208 KRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNF- 265
K+ +++ Y + L++ + G ++EQ+G +S E ++ ++ P P + +N
Sbjct: 493 KKHLKNSSYEKFKASALYQAINDTGITAEQVGENISAEHQLHPVVDHPSLKPTDSVANIL 552
Query: 266 ------KCAMFNSS-QAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDS 318
+F+ + + L+ A+E+S P VR+ +R F +V T G
Sbjct: 553 EGPEAKDLQIFSQNPKLALETIEKYYALELSKNPKVRQKIRDDFYKYYIVDVALTSKGRK 612
Query: 319 AIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKL----LQVTIKLPEDSLNKLFSD 374
I + +K+ + F + ++ E E L +Q+ + + N LF
Sbjct: 613 EIQRGSPYEDIKYALGRTPAHFRSEPDVFLRMLEAESLHLMNIQIHVSSQDQYTNHLFQT 672
Query: 375 CKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKA 434
E + S+ A WN R AL N + + +E + + +
Sbjct: 673 SLE---TSNTSEIASEWNSFRRDAFDSAL-NKVFSDVSQEIKDELKKTCLRLVTKSVRHQ 728
Query: 435 LWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEVVDVLFTGCLT 494
K+ P+ P + PRVL G GK + D + L
Sbjct: 729 FMFKLDQAPFIP-----NPKDPKIPRVLTITCGQGKFGS------------DAIIAVYLN 771
Query: 495 LRSQNVRDQQSKKNDQER--------LLKFMMDH-QPHVVVLGAVNLSCTSLKDDIYEII 545
+++ VRD + +N +R L ++ H QP+V+ + N S L I EI+
Sbjct: 772 RKTEFVRDYKIVENPFDRKEPELFENALDDIIQHCQPNVIGINGPNPSTQRLYKKIQEIV 831
Query: 546 FKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQN 605
K + V + + ++Y ++ + Y++S ++ + P + VK +ALGRY+ +
Sbjct: 832 QK-----KQIVDNRGSHVPVIYVEDEVAVRYQSSERAAQEFPSKPTLVKYCIALGRYIHS 886
Query: 606 PLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQ 665
PL A L E+LS + ++ LT + +E VD+ N VG+++N A +
Sbjct: 887 PLLEYANLTN--EELLSLSIHSHQSLLTRELFLQALETSFVDIVNLVGIEVNKATDNHYY 944
Query: 666 FAPLQFISGLGPRKAASLQRSLVRAG-AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQ 724
L++I+G G RK+A SL R + R+ +T L K +F+N+ FL + + +
Sbjct: 945 AKALRYIAGFGRRKSADFLESLQRLNEPLLARQQLITHDILTKTIFMNSAAFLYISWNEK 1004
Query: 725 AASSSQF-IDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRP 782
D LD TRIHPE Y LA ++A + D + +E + IE +R+ P
Sbjct: 1005 NQRYEDLEHDQLDGTRIHPEDYHLATKVAADALEFDPDAIAEKEEQGTMSEFIELLREDP 1064
Query: 783 DL---LKTYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMI 836
D L++ L+ + +E ++ + K L I EL+ GF++ RN + DE F +
Sbjct: 1065 DRRTKLESLNLEAYAEELEKNTGQRKLNNLNTIVLELLEGFEELRNDFHPLHGDEVFKSL 1124
Query: 837 SGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGD 896
+GE+E T +G ++ V R + V SG+ ++ + + + G
Sbjct: 1125 TGESEKTFFKGCIIPVRVERFRHNDIYGVTNSGVECVINAQRHIGAQLKRPAEEVYEIGK 1184
Query: 897 ILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPY---YHEERSSRQSEQEKARKE 953
K+ I + + E ++R + DP +E ++ E++ A +E
Sbjct: 1185 TYPAKVIYIDYDNISCEVSLLEHDIRRQYVPIHYSKDPSIWNVEQEMKDQEIEKKLALEE 1244
Query: 954 KELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGV 1013
+ H R+I HP + N T +A L ++E G+ +IR SSRG +L +T K+ +
Sbjct: 1245 ARAKRTH---RVINHPYYGNFTGPQAEDYLRSRERGDFVIRQSSRGDDHLAITWKLDKDL 1301
Query: 1014 YAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKF 1073
+ H DI+E KD ++ + +GKTL + + + DLD+++ Y+ V L + S KF
Sbjct: 1302 FQHVDILE-----KDKENPLALGKTLIVEDQKYHDLDQIIVEYLQNKVRLLNEITSNEKF 1356
Query: 1074 RKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
+KG+K EV + + P R VY F ++EHPG F L +
Sbjct: 1357 KKGTKKEVIKFIEDYSKVNPNRSVYYFSFNYEHPGWFYLMF 1397
>sp|P23615|SPT6_YEAST Transcription elongation factor SPT6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPT6 PE=1 SV=1
Length = 1451
Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 244/1097 (22%), Positives = 468/1097 (42%), Gaps = 88/1097 (8%)
Query: 53 GHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTP 112
+DL+ ++ I + + + L++PFI YR+ N +++ D F
Sbjct: 364 NYDLTEFKEAIGNAIKFITKENLEVPFIYAYRR------------NYISSREKDGF---- 407
Query: 113 TLKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSIS 172
L LW I LD ++ L +K +Q +Y + + ++ + + + +
Sbjct: 408 -LLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDP---------IVTEYFKNQNT 457
Query: 173 KSLEAAETEREVDDVDLKFNLHFPPGEVGVDEG--QYKRPKRSTKYSSCSKAGLWEVASK 230
S+ + +++ D L+F E+ ++ K+ +++ Y + L++ S
Sbjct: 458 ASIAELNSLQDIYDY-LEFKYANEINEMFINHTGKTGKKHLKNSSYEKFKASPLYQAVSD 516
Query: 231 FGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFKCA------MFNS-SQAVLQGARH 282
G S+E +G +S + ++ ++ P P E+ + A +F S ++ + +
Sbjct: 517 IGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNANSGDLQVFTSNTKLAIDTVQK 576
Query: 283 MAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPLRKFED 342
++E+S +R+ VRS F + T G I + +K+ + F
Sbjct: 577 YYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRR 636
Query: 343 AQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWNDQRELI 398
+ ++ E E L +++KL S + LF E + S A WN+ R+L
Sbjct: 637 DPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALE---TTNTSDIAIEWNNFRKLA 693
Query: 399 LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAA 458
A+D + + +E + ++ + + K+ P+ D
Sbjct: 694 FNQAMDK-IFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRD-----PKI 747
Query: 459 PRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQER--- 512
P++L+ G G+ V ++ G+ + R + D K + E+
Sbjct: 748 PKILSLTCGQGRFGADAIIAVYVNRKGDFI----------RDYKIVDNPFDKTNPEKFED 797
Query: 513 -LLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDES 571
L + QP+ + + N + E++ K R GH + I+Y ++
Sbjct: 798 TLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSR--GHT---IPIIYVEDE 852
Query: 572 LPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENF 631
+ Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P +N
Sbjct: 853 VAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTS--EEVRSLSIHPHQNL 910
Query: 632 LTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAG 691
L+ ++ +E VD+ N V +++N A + + L++ISG G RKA +SL R
Sbjct: 911 LSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLN 970
Query: 692 A-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESYGLAQ 749
+ R+ +T + L K +F+N+ GFL + + + D LD TRIHPE Y LA
Sbjct: 971 EPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLAT 1030
Query: 750 ELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKREN---K 802
++A + D + +E + IE +R+ PD L++ L+ + +E ++ K
Sbjct: 1031 KVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRK 1090
Query: 803 RETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQGQRA 862
L I EL+ GF++ RN + DE F ++GE+E T +G ++ V R
Sbjct: 1091 LNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHNDI 1150
Query: 863 ICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRESEMR 922
IC S + ++ + ++ ++ G K+ I + + +++
Sbjct: 1151 ICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEVSLLDHDVK 1210
Query: 923 NNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADEAMKL 982
+ DP + + + +E+ + A+ R+I HP + +A
Sbjct: 1211 QQYVPISYSKDPSIWDLKQELEDAEEERKLMMAEARAKRTHRVINHPYYFPFNGRQAEDY 1270
Query: 983 LSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKTLKIG 1042
L +KE GE +IR SSRG +L +T K+ ++ H DI E K++ + +GK L +
Sbjct: 1271 LRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENP-----LALGKVLIVD 1325
Query: 1043 EDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVYGFGI 1102
+ DLD+++ Y+ V L M S KF+ G+K +V + + P + VY F +
Sbjct: 1326 NQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVKFIEDYSRVNPNKSVYYFSL 1385
Query: 1103 SHEHPGTFILTYIRSTN 1119
+H++PG F L + + N
Sbjct: 1386 NHDNPGWFYLMFKINAN 1402
>sp|Q75EP8|SPT6_ASHGO Transcription elongation factor SPT6 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SPT6
PE=3 SV=2
Length = 1432
Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 231/931 (24%), Positives = 399/931 (42%), Gaps = 51/931 (5%)
Query: 208 KRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLE-KMGDELEDPKETPEEMASNFK 266
K+ +++ Y + L++ G ++EQ+G + E ++ ++ P P E S
Sbjct: 469 KKHLKNSSYEKFKSSSLYQAVKDVGITAEQIGENIGAETQIHPVVDHPNLKPSESISQIL 528
Query: 267 CAMFNSSQAVLQG-------ARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSA 319
A Q + + A EI P VR+ +R+ F +V T G
Sbjct: 529 DAASADLQVFAKNHKLAWDTVQKYFAAEIGNNPKVRQKIRNDFYKYYIVDVVLTTKGRKE 588
Query: 320 IDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKL----PEDSLNKLFSDC 375
I + +K+ + F A + ++ E E L + IK+ E LF
Sbjct: 589 IQRSSPYEDIKYAINRTPGHFRSAPDVFLRMLEAESLHLMNIKIHMSSQEQYCEHLFQIA 648
Query: 376 KEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKAL 435
E + S+ A WN+ R AL+ + + +E + + ++ +
Sbjct: 649 LE---TTNTSEIAIEWNNFRRNAFYQALEK-IFEDIAQEIKDELKKTSQKLVANSVRHRF 704
Query: 436 WNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGK---PETTFVMLDSSGEVVDVLFTGC 492
+K+ P+ P E PRVL G G+ V+L+ G+ V
Sbjct: 705 MSKLDQAPFIP-----NPREPKIPRVLTITCGQGRFGLDAIIAVLLNRKGDFVKDFKI-- 757
Query: 493 LTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEH 552
QN D+ + + L + + QP+V+ + N L I E+I K ++
Sbjct: 758 ----VQNPFDRDQPQAFEAVLDNIIQEAQPNVIGINGPNPKTQKLFKKIQEVIQK--KQI 811
Query: 553 PRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVAT 612
+ GH + +++ ++ + Y++S + + P + VK +AL RY+ +PL
Sbjct: 812 VDNRGHN---IPVIFVEDEIAIRYQSSERGAQEFPNKPTLVKYCIALARYIHSPLLEYTN 868
Query: 613 LCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFI 672
L E+ S + P ++ L +E VD+ N VG+++N A + LQ+I
Sbjct: 869 LSE--EELQSLLIHPHQSLLPRHIFKRALETSFVDIVNLVGVEVNKANDNPYYAKALQYI 926
Query: 673 SGLGPRKAASLQRSLVRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
+GLG RKA SL R + R+ +T L K +F+N+ GFL + + +
Sbjct: 927 AGLGKRKAIDFLESLQRLNEPLLARQQLITHDILHKTIFMNSAGFLYISWNEKNQRYEDL 986
Query: 732 -IDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LK 786
D LD TRIHPE Y LA ++A + D + +E A+ IE +RD PD L+
Sbjct: 987 EHDHLDSTRIHPEDYHLATKVAADALEYDPDAIREKEEQGAMSEFIELLRDDPDRRMKLE 1046
Query: 787 TYLLDRHIKEKKR---ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDT 843
+ L+ + E +R + K L I EL+ GF++ RN + DE F ++GET+ T
Sbjct: 1047 SLNLEEYADELERSTGQRKLNNLNTIVLELLEGFEELRNDFHPLQGDEIFTSLTGETDKT 1106
Query: 844 LAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIK 903
+G ++ V R + IC+ S + ++ + + SD G KI
Sbjct: 1107 FFKGSIIPVRVERFKHNDIICISNSQVECIVNAQRHLGVQLKRPASDIYEVGKTYPAKII 1166
Query: 904 SIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKE 963
I + + ++++ + DP + + +E+ + A+
Sbjct: 1167 FIDYENISAEVSLLDHDVKHQYIPVDYSKDPTIWNLKQELEDVEEEKKISMAEARAKRTH 1226
Query: 964 RLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGG 1023
R+I HP + +A L +KE GE IIR SSRG +L +T K+ ++ H DI+E
Sbjct: 1227 RVINHPYYFPFNGKQAEDYLRSKERGEFIIRQSSRGDDHLAITWKLDKDLFQHVDILELD 1286
Query: 1024 KDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDE 1083
K++ + +GKTL + + + DLD V+ Y+ + L + S KF+KG+K EV +
Sbjct: 1287 KENP-----LALGKTLIVDNNKYNDLDHVIVEYLQNKIKLLNEITSNEKFKKGTKKEVVK 1341
Query: 1084 LLRIEKAEFPTRIVYGFGISHEHPGTFILTY 1114
+ P R VY ++EHPG F L +
Sbjct: 1342 FIEDYSNVNPNRSVYYLSFNYEHPGWFYLMF 1372
>sp|Q6FLB1|SPT6_CANGA Transcription elongation factor SPT6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SPT6 PE=1 SV=1
Length = 1449
Score = 229 bits (585), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 257/1096 (23%), Positives = 469/1096 (42%), Gaps = 98/1096 (8%)
Query: 54 HDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPT 113
+DL+ ++ + + + + L++PFI YR+ N +++ D F
Sbjct: 364 YDLTEFKEAVGNAIKFITKENLEVPFIYAYRR------------NYISSRERDGF----- 406
Query: 114 LKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISK 173
L LW I LD ++ QS KR + +R Y E L ++ L D K
Sbjct: 407 LLTEDDLWEIVHLDIEF----------QSIINKR--DYVKRFYSE--LGISDPLVDEYFK 452
Query: 174 SLEAAETEREVDDVDLKFN-LHFPPGEVGVDEGQYKRPK------RSTKYSSCSKAGLWE 226
+ ++ + E++ + +N L F + D Q + K +++ Y + L++
Sbjct: 453 N-QSTGSVAELNSLQDIYNYLEFKYAQEINDNLQKESDKSGKKHLKNSNYEKFKSSALYK 511
Query: 227 VASKFGYSSEQLGLQLSLEKM-----GDELEDPKETPE----EMASNFKCAMFNSSQAVL 277
V G S++Q+G +S + E P E E E A + + + N A +
Sbjct: 512 VIEAVGVSADQIGNNISSQHQIHIPKDHEALKPLELIELVLNENAGDLQVFLSNIKLA-M 570
Query: 278 QGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGVKWLREKPL 337
+ + EIS VR+ VR+ F +V T G I + +K+ +
Sbjct: 571 DTIQKYYSWEISKNTKVREKVRADFYRYYLVDVVLTTKGKREIQRGSLYEDIKYAINRTP 630
Query: 338 RKFEDAQWLLIQKAEEEKLLQVTIKLPEDS----LNKLFSDCKEHYLSDGVSKSAQLWND 393
F + ++ E E L +T+KL S ++ LF E + S A WN+
Sbjct: 631 LHFRREPEIFLKMLEAESLNLMTLKLHMSSQKQYVDHLFQIALE---TTNTSDLAIEWNN 687
Query: 394 QRELILKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGKALWNKVSVGPYQRKDNDITP 453
R+ A++ + + +E + + + + K+ PY P
Sbjct: 688 FRKAAFTQAIEK-IFNDIAQEIKDDLEKTCQKLVCKVVRHKFMTKLDQAPY-------VP 739
Query: 454 D--EEAAPRVLACCWGPGKPETTFVM---LDSSGEVV-DVLFTGCLTLRSQNVRDQQSKK 507
D + P++L G G+ + ++ ++ GE V D T +N D+ +
Sbjct: 740 DLKDPKLPKILTLTCGQGRFGSDAIIAAYVNRKGEFVRDFKIT-------ENPFDRSNPD 792
Query: 508 NDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVY 567
+E + Q + + N L + E+I K V + + I+Y
Sbjct: 793 KFEEVFEDIVQTCQITAIGINGPNPKTQKLFKKLIEVIHK-----KNLVDSKGTHIPIIY 847
Query: 568 GDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCP 627
++ + Y+NS ++ + P + VK +AL RY+ +PL A L E+ S + P
Sbjct: 848 VEDEIAIRYQNSERAAQEFPNKPPYVKYCIALARYMHSPLMEYANLSP--EELKSLSIHP 905
Query: 628 LENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQFISGLGPRKAASLQRSL 687
++FL+P+ IE VD+ N VG+++N A + + L+F+SG G RKA SL
Sbjct: 906 FQSFLSPEYLNRAIETAFVDIVNLVGVEVNKATDNSYYASVLRFVSGFGKRKAIDFLESL 965
Query: 688 VRAGA-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF-IDLLDDTRIHPESY 745
R + R+ +T + L K +F+N+ GFL + S + D LD TRIHPE Y
Sbjct: 966 QRLNEPLLARQQLITHNILHKVIFMNSAGFLYISWSKKRQRYEDLEHDQLDSTRIHPEDY 1025
Query: 746 GLAQELAKEVYNRDIEGDLNDDED-ALEMAIEHVRDRPDL---LKTYLLDRHIKEKKR-- 799
LA ++A + D + +E+ + IE +R+ P+ L++ L+ + +E ++
Sbjct: 1026 HLATKVAADALEYDPDTIAEKEENGTMSEFIEFLREDPNRRSKLESLNLESYAEELEKNT 1085
Query: 800 -ENKRETLYLIRRELIHGFQDWRNQYKEPSQDEEFYMISGETEDTLAEGRVVQATVRRVQ 858
+ K L I EL+ GF++ RN + +E F ++GET+ TL +G V+ V R
Sbjct: 1086 GQRKLNNLNTIVLELLDGFEELRNDFHIMQSEEVFSSLTGETDKTLFKGCVIPVRVERFW 1145
Query: 859 GQRAICVLESGLAGMLMKEDYSDDWRDSELSDKLHEGDILTCKIKSIQKNRYQVFLVCRE 918
+CV S + ++ + + ++ K+ I + E
Sbjct: 1146 HNDIVCVTNSEVECIVNAQRHLGAQVRRPPNEIYELNKTYPAKVIFIDYPNITAEVSLLE 1205
Query: 919 SEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARKEKELAKKHFKERLIVHPCFQNVTADE 978
+++N + DP + + + +E+ + ++ R+I HP + +
Sbjct: 1206 HDVKNEYNPLTYSKDPAIWDLKQELEDSEEEKKVTMAESRAKRTHRVINHPYYFPFNGKQ 1265
Query: 979 AMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIIEGGKDHKDIKSLVGIGKT 1038
A L +KE G+ +IR SSRG +L +T K+ ++ H DI E K++ + +GK
Sbjct: 1266 AEDYLRSKERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQELEKENP-----LALGKV 1320
Query: 1039 LKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRKFRKGSKAEVDELLRIEKAEFPTRIVY 1098
L + + DLD+++ Y+ + L + S KF+ G+K EV + + P + VY
Sbjct: 1321 LVVEGQRYHDLDQIIVEYLQNKIRLLNELTSNEKFKAGTKKEVVKFIEDYSKVNPKKSVY 1380
Query: 1099 GFGISHEHPGTFILTY 1114
F +++E+PG F L +
Sbjct: 1381 YFSLNYENPGWFYLIF 1396
>sp|O31489|YDCI_BACSU Uncharacterized protein YdcI OS=Bacillus subtilis (strain 168)
GN=ydcI PE=4 SV=2
Length = 719
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 145/684 (21%), Positives = 273/684 (39%), Gaps = 145/684 (21%)
Query: 77 IPFIAMYRKEECLSLLKDLEQNEVNNDNNDDFERTPTLKWHKVLWAIHDLDKKWLLLQKR 136
+PFIA YRKE+ S+ +EV I + ++W +Q
Sbjct: 35 VPFIARYRKEQTGSM------DEVQ---------------------IQTISERWQYIQN- 66
Query: 137 KSALQSYYKKRYEEESRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFP 196
+R EE R I ++ +L D++ + +E + +EV+D L+ P
Sbjct: 67 -------LNQRKEEVIRLIAEQDKLT------DNLKRKIEQSVKLQEVED------LYRP 107
Query: 197 PGEVGVDEGQYKRPKRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKE 256
YK+ KR TK + GL +A L+L + D L
Sbjct: 108 ----------YKQ-KRKTKATVAKSKGLEPLADYI----------LTLPQ-DDHL---AA 142
Query: 257 TPEEMASNFKCAMFNSSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDG 316
T ++ S K +F +A+ +GA+H+ A +IS EP RK++R + + G
Sbjct: 143 TADQYISEEK-EVFTREEAI-EGAKHIIAEQISDEPTFRKWIRQETFKRGTIKSAA---G 197
Query: 317 DSAIDSFHQFAGVKWLREKPLRKFEDAQWLLIQKAEEEKLLQVTIKLPEDSLNKLFSDCK 376
SA + + E+P+ K + L + + E+E +L+V I+ P D +
Sbjct: 198 KSADTDEKNVYEMYYEYEEPIAKVVPHRVLAMNRGEKEDILKVAIEPPADHIKA------ 251
Query: 377 EHYLSDGVSKSAQLWNDQRELI---LKDALDNFLLPSMVKEARSLMSGRAKSWLLMEYGK 433
YL + K+ RE++ ++D+ + P++ +E R +S +A + + +
Sbjct: 252 --YLEKQIIKNRS--TSVREILQETIEDSYKRLIQPAIEREIRKELSEKADEQAIHIFSE 307
Query: 434 ALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPETTFVMLDSSGEV--VDVLFTG 491
L K+ + P + + D P C + D +G+V +DV++
Sbjct: 308 NL-RKLLLQPPMKGKTVLGVD----PAFRTGC--------KLAVSDETGKVLKIDVIYPH 354
Query: 492 CLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNLSCTSLKDDIYEIIFKMVEE 551
++ K E++ K + +Q +V +G S + + I ++ +
Sbjct: 355 APVNKT---------KEAHEKVKKILEQYQVEMVAIGNGTAS-----RETEQFIVNVLRD 400
Query: 552 HPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVA 611
PR + + V +E+ +Y S ++ ++ P K + AV++ R LQ+PLA +
Sbjct: 401 MPRKIYY-------VIVNEAGASVYSASELAREEFPDLKVEERSAVSIARRLQDPLAELV 453
Query: 612 TLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPLQF 671
+ + ++ + L ++ + + ++ A LQ+
Sbjct: 454 KIDPKSVGVGQYQHDVSQKRLNESLRFVV----------ETVVNQVGVNVNTASAALLQY 503
Query: 672 ISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQF 731
++GL A ++ + G RK+ LG K + +GFLRV+ +
Sbjct: 504 VAGLSKSVAGNVVKKREEIGKFSNRKELKDIPRLGAKTYEQCIGFLRVQEGTEP------ 557
Query: 732 IDLLDDTRIHPESYGLAQELAKEV 755
LD T IHPESY + L K++
Sbjct: 558 ---LDRTGIHPESYKETKALLKKL 578
>sp|Q51152|YHGF_NEIMB Uncharacterized protein NMB0075 OS=Neisseria meningitidis serogroup
B (strain MC58) GN=NMB0075 PE=4 SV=2
Length = 757
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 575 LYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTP 634
+Y S +++ + P +++ AV++ R LQ+PLA + + + S + ++ +
Sbjct: 411 IYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVNQ 465
Query: 635 DEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFISGLGPRKAASLQRSLVRAGAI 693
++ ++ V+ D N VG+D+N A APL ISGL A ++ GA
Sbjct: 466 NQLAKSLDAVVEDCVNAVGVDVNTA------SAPLLARISGLNQTLAQNIVAYRDENGAF 519
Query: 694 FTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYG-LAQELA 752
+RK + LG+K F A GFLR+ + LD + +HPE+Y +A+ LA
Sbjct: 520 DSRKKLLKVPRLGEKTFEQAAGFLRINGGKEP---------LDASAVHPEAYPVVAKMLA 570
Query: 753 KE 754
++
Sbjct: 571 QQ 572
>sp|P57072|YHGF_NEIMA Uncharacterized protein NMA0194 OS=Neisseria meningitidis serogroup
A / serotype 4A (strain Z2491) GN=NMA0194 PE=4 SV=1
Length = 757
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 559 EMDELSI--VYGDESLPRLYENSRISSDQLPGQKGNVKRAVALGRYLQNPLAMVATLCGP 616
EM ++ + + E+ +Y S +++ + P +++ AV++ R LQ+PLA + +
Sbjct: 393 EMSKMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKI--- 449
Query: 617 GREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQVGLDINLAIHREWQFAPL-QFISGL 675
+ S + ++ + + ++ V+ D N VG+D+N A APL ISGL
Sbjct: 450 --DPKSIGVGQYQHDVNQSQLAKSLDAVVEDCVNAVGVDVNTA------SAPLLARISGL 501
Query: 676 GPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGQAASSSQFIDLL 735
A ++ GA +RK + LG+K F A GFLR+ + L
Sbjct: 502 NQTLAQNIVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEP---------L 552
Query: 736 DDTRIHPESYG-LAQELAKE 754
D + +HPE+Y +A+ LA++
Sbjct: 553 DASAVHPEAYPVVAKMLAQQ 572
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 541,242,933
Number of Sequences: 539616
Number of extensions: 25567700
Number of successful extensions: 158921
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 962
Number of HSP's that attempted gapping in prelim test: 103218
Number of HSP's gapped (non-prelim): 20798
length of query: 1344
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1214
effective length of database: 121,419,379
effective search space: 147403126106
effective search space used: 147403126106
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)