Query 039338
Match_columns 493
No_of_seqs 393 out of 1893
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 14:40:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039338.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039338hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3okp_A GDP-mannose-dependent a 100.0 3.4E-46 1.2E-50 368.7 33.9 366 81-489 2-384 (394)
2 3fro_A GLGA glycogen synthase; 100.0 7.4E-47 2.5E-51 378.9 28.8 389 82-491 1-437 (439)
3 3c48_A Predicted glycosyltrans 100.0 2.8E-45 9.5E-50 367.5 36.5 380 80-489 17-430 (438)
4 2r60_A Glycosyl transferase, g 100.0 1.2E-44 4.2E-49 368.8 32.0 393 82-489 6-464 (499)
5 2jjm_A Glycosyl transferase, g 100.0 7.8E-43 2.7E-47 344.7 33.3 357 82-489 12-390 (394)
6 2gek_A Phosphatidylinositol ma 100.0 6.8E-43 2.3E-47 346.5 32.8 360 79-489 16-388 (406)
7 1rzu_A Glycogen synthase 1; gl 100.0 6.6E-44 2.2E-48 362.2 25.4 391 84-489 1-480 (485)
8 3oy2_A Glycosyltransferase B73 100.0 1.2E-42 4.2E-47 345.5 29.5 345 84-489 1-395 (413)
9 2qzs_A Glycogen synthase; glyc 100.0 1.5E-42 5.3E-47 352.1 28.4 390 84-488 1-480 (485)
10 2x6q_A Trehalose-synthase TRET 100.0 1E-42 3.5E-47 346.5 26.5 357 80-485 37-415 (416)
11 3vue_A GBSS-I, granule-bound s 100.0 5.6E-42 1.9E-46 348.0 29.4 395 81-485 7-512 (536)
12 2iw1_A Lipopolysaccharide core 100.0 1.1E-41 3.6E-46 334.2 28.4 354 84-486 1-373 (374)
13 3s28_A Sucrose synthase 1; gly 100.0 7.4E-41 2.5E-45 349.9 31.5 387 81-485 276-770 (816)
14 2iuy_A Avigt4, glycosyltransfe 100.0 3.7E-41 1.3E-45 326.2 25.7 312 81-489 1-340 (342)
15 2x0d_A WSAF; GT4 family, trans 100.0 1.3E-38 4.6E-43 314.0 16.4 347 81-487 44-412 (413)
16 2vsy_A XCC0866; transferase, g 100.0 6.3E-34 2.2E-38 294.5 24.8 331 79-487 201-562 (568)
17 2hy7_A Glucuronosyltransferase 100.0 4E-34 1.4E-38 282.3 16.1 196 248-487 174-382 (406)
18 1f0k_A MURG, UDP-N-acetylgluco 100.0 5.4E-33 1.8E-37 271.2 20.1 324 83-487 6-360 (364)
19 1vgv_A UDP-N-acetylglucosamine 100.0 2.5E-33 8.6E-38 275.6 13.9 358 84-488 1-380 (384)
20 3beo_A UDP-N-acetylglucosamine 100.0 6E-33 2.1E-37 272.0 16.3 348 81-482 6-374 (375)
21 1uqt_A Alpha, alpha-trehalose- 100.0 9.9E-29 3.4E-33 246.4 24.5 200 275-484 218-454 (482)
22 2bfw_A GLGA glycogen synthase; 100.0 1E-28 3.4E-33 219.6 18.8 182 281-469 2-200 (200)
23 3nb0_A Glycogen [starch] synth 100.0 2.7E-28 9.4E-33 243.6 23.8 303 176-489 179-638 (725)
24 1v4v_A UDP-N-acetylglucosamine 100.0 1.8E-27 6.1E-32 233.1 18.4 343 84-486 6-366 (376)
25 3qhp_A Type 1 capsular polysac 99.9 7.8E-27 2.7E-31 200.8 17.1 158 311-476 2-166 (166)
26 3t5t_A Putative glycosyltransf 99.9 1.5E-25 5.2E-30 220.5 26.4 278 177-485 148-474 (496)
27 2xci_A KDO-transferase, 3-deox 99.9 5.3E-26 1.8E-30 221.5 16.0 304 85-470 42-366 (374)
28 3rhz_A GTF3, nucleotide sugar 99.9 1.2E-22 4E-27 193.3 27.6 240 176-475 72-327 (339)
29 2f9f_A First mannosyl transfer 99.9 1.4E-24 4.9E-29 188.5 13.1 146 305-459 18-173 (177)
30 3dzc_A UDP-N-acetylglucosamine 99.9 7.8E-24 2.7E-28 207.5 16.8 334 81-462 23-380 (396)
31 3otg_A CALG1; calicheamicin, T 99.9 1.5E-23 5E-28 207.9 18.9 341 80-483 17-409 (412)
32 3ot5_A UDP-N-acetylglucosamine 99.9 7.7E-24 2.6E-28 207.8 16.7 350 80-481 24-392 (403)
33 3s2u_A UDP-N-acetylglucosamine 99.9 3.5E-21 1.2E-25 186.7 22.2 327 83-484 2-358 (365)
34 2iyf_A OLED, oleandomycin glyc 99.9 5.9E-21 2E-25 190.2 22.3 353 82-485 6-402 (430)
35 4fzr_A SSFS6; structural genom 99.9 5.9E-22 2E-26 195.4 11.2 156 308-479 225-397 (398)
36 3tsa_A SPNG, NDP-rhamnosyltran 99.8 1.2E-20 4E-25 185.6 16.7 163 308-482 216-388 (391)
37 3ia7_A CALG4; glycosysltransfe 99.8 7.3E-19 2.5E-23 173.4 20.3 350 84-483 5-399 (402)
38 3oti_A CALG3; calicheamicin, T 99.8 1.2E-18 4E-23 171.7 19.1 158 308-481 230-396 (398)
39 4hwg_A UDP-N-acetylglucosamine 99.8 8.1E-20 2.8E-24 177.5 10.6 350 83-483 9-376 (385)
40 3rsc_A CALG2; TDP, enediyne, s 99.8 3.1E-18 1.1E-22 169.6 20.1 353 81-483 18-414 (415)
41 3q3e_A HMW1C-like glycosyltran 99.8 3.2E-18 1.1E-22 170.9 19.9 331 81-487 273-626 (631)
42 2p6p_A Glycosyl transferase; X 99.8 7.3E-17 2.5E-21 158.1 21.9 157 309-482 209-379 (384)
43 4gyw_A UDP-N-acetylglucosamine 99.7 8.3E-16 2.8E-20 161.0 24.4 183 299-487 512-708 (723)
44 2yjn_A ERYCIII, glycosyltransf 99.7 4E-16 1.4E-20 155.6 20.1 159 308-482 265-435 (441)
45 2iya_A OLEI, oleandomycin glyc 99.7 1.2E-14 4E-19 144.3 25.9 160 309-482 254-421 (424)
46 4amg_A Snogd; transferase, pol 99.6 1E-14 3.6E-19 143.4 15.2 161 307-480 234-398 (400)
47 1iir_A Glycosyltransferase GTF 99.5 3.8E-13 1.3E-17 132.9 19.0 156 310-488 238-402 (415)
48 3h4t_A Glycosyltransferase GTF 99.5 7.8E-13 2.7E-17 130.1 19.4 156 309-482 220-382 (404)
49 1rrv_A Glycosyltransferase GTF 99.4 7.1E-13 2.4E-17 131.0 12.8 135 311-462 238-382 (416)
50 2o6l_A UDP-glucuronosyltransfe 99.3 2.9E-12 9.8E-17 109.8 9.7 129 308-452 19-157 (170)
51 1l5w_A Maltodextrin phosphoryl 99.2 2.3E-10 7.8E-15 116.9 18.2 232 249-486 410-732 (796)
52 2gj4_A Glycogen phosphorylase, 99.1 1E-09 3.4E-14 112.6 16.1 231 249-486 434-756 (824)
53 2c4m_A Glycogen phosphorylase; 99.1 7.7E-10 2.6E-14 113.1 13.2 232 249-486 399-721 (796)
54 2acv_A Triterpene UDP-glucosyl 98.9 5.8E-06 2E-10 82.2 34.1 189 248-448 207-425 (463)
55 2pq6_A UDP-glucuronosyl/UDP-gl 98.9 1E-06 3.6E-11 88.2 26.8 146 308-466 293-455 (482)
56 2vch_A Hydroquinone glucosyltr 98.7 6.5E-05 2.2E-09 75.0 34.4 131 309-448 267-429 (480)
57 3hbf_A Flavonoid 3-O-glucosylt 98.7 1.1E-05 3.7E-10 79.5 28.1 204 248-464 211-428 (454)
58 1psw_A ADP-heptose LPS heptosy 98.7 7.2E-07 2.5E-11 85.4 18.6 108 297-412 167-286 (348)
59 2c1x_A UDP-glucose flavonoid 3 98.7 7.5E-06 2.6E-10 81.2 25.9 200 249-466 210-428 (456)
60 3hbm_A UDP-sugar hydrolase; PS 98.6 2.6E-07 8.8E-12 84.8 11.9 240 84-414 1-252 (282)
61 3l7i_A Teichoic acid biosynthe 98.4 1.9E-05 6.6E-10 83.3 20.3 186 250-448 476-683 (729)
62 3tov_A Glycosyl transferase fa 98.1 0.00012 4E-09 69.9 17.9 106 300-413 175-287 (349)
63 2gt1_A Lipopolysaccharide hept 97.8 0.0014 4.8E-08 61.7 18.8 130 310-448 178-322 (326)
64 2jzc_A UDP-N-acetylglucosamine 97.7 6.7E-05 2.3E-09 65.9 7.4 130 305-447 23-198 (224)
65 1ygp_A Yeast glycogen phosphor 96.1 0.078 2.7E-06 54.8 14.1 126 312-438 601-766 (879)
66 1xv5_A AGT, DNA alpha-glucosyl 93.4 3.1 0.00011 34.9 32.7 327 83-467 1-385 (401)
67 4g65_A TRK system potassium up 92.1 2.7 9.1E-05 41.1 14.2 121 323-447 218-366 (461)
68 4gi5_A Quinone reductase; prot 84.9 1.4 4.6E-05 39.9 5.9 47 79-129 18-65 (280)
69 4b4o_A Epimerase family protei 84.6 1.1 3.9E-05 40.8 5.4 33 84-126 1-33 (298)
70 2v4n_A Multifunctional protein 80.9 7.1 0.00024 34.4 8.7 39 83-129 1-39 (254)
71 3q0i_A Methionyl-tRNA formyltr 80.4 3.6 0.00012 37.8 7.0 106 81-206 5-115 (318)
72 2d1p_A TUSD, hypothetical UPF0 79.3 4 0.00014 32.4 6.0 46 81-129 10-56 (140)
73 3auf_A Glycinamide ribonucleot 78.8 3.1 0.00011 36.2 5.7 106 82-206 21-131 (229)
74 2hy5_A Putative sulfurtransfer 78.5 4.2 0.00014 31.7 6.0 43 84-129 1-44 (130)
75 2ixd_A LMBE-related protein; h 77.1 5.8 0.0002 34.9 7.0 42 82-129 2-43 (242)
76 3ty2_A 5'-nucleotidase SURE; s 76.0 2.9 0.0001 36.9 4.7 41 81-129 9-49 (261)
77 3kcn_A Adenylate cyclase homol 75.4 27 0.00092 27.3 10.4 77 372-448 36-123 (151)
78 2bw0_A 10-FTHFDH, 10-formyltet 75.2 7.7 0.00026 35.9 7.6 107 81-206 20-129 (329)
79 3jte_A Response regulator rece 74.6 20 0.00068 27.6 9.2 76 373-448 37-123 (143)
80 4ds3_A Phosphoribosylglycinami 74.4 3.4 0.00012 35.4 4.6 108 80-206 4-116 (209)
81 1fmt_A Methionyl-tRNA FMet for 73.8 6.2 0.00021 36.2 6.5 35 82-127 2-36 (314)
82 1k68_A Phytochrome response re 73.4 24 0.00082 26.8 9.4 77 372-448 37-131 (140)
83 2zay_A Response regulator rece 73.1 27 0.00094 27.0 9.8 76 373-448 42-128 (147)
84 3hly_A Flavodoxin-like domain; 72.8 6.1 0.00021 32.1 5.7 39 84-127 1-39 (161)
85 3dhn_A NAD-dependent epimerase 72.2 14 0.00048 31.5 8.3 36 84-129 5-40 (227)
86 3c97_A Signal transduction his 71.7 32 0.0011 26.4 10.8 76 373-448 44-130 (140)
87 3tqq_A Methionyl-tRNA formyltr 71.4 5.5 0.00019 36.5 5.6 105 82-206 1-110 (314)
88 2ywr_A Phosphoribosylglycinami 70.0 5.1 0.00017 34.5 4.8 104 84-206 2-110 (216)
89 3kcq_A Phosphoribosylglycinami 70.0 5.8 0.0002 34.1 5.0 102 82-206 7-112 (215)
90 3grc_A Sensor protein, kinase; 70.0 34 0.0012 26.1 9.5 76 373-448 40-127 (140)
91 3tqr_A Phosphoribosylglycinami 69.9 7.5 0.00026 33.4 5.7 106 82-206 4-113 (215)
92 1q74_A 1D-MYO-inosityl 2-aceta 69.8 20 0.00067 32.7 8.9 41 83-129 4-44 (303)
93 3cg4_A Response regulator rece 69.7 35 0.0012 26.1 9.8 76 373-448 41-127 (142)
94 3e8x_A Putative NAD-dependent 69.6 5.6 0.00019 34.5 5.1 39 80-128 18-56 (236)
95 3f6r_A Flavodoxin; FMN binding 69.3 8.4 0.00029 30.6 5.7 39 84-127 2-40 (148)
96 3heb_A Response regulator rece 68.7 26 0.0009 27.3 8.7 67 381-447 59-134 (152)
97 4e7p_A Response regulator; DNA 68.0 39 0.0013 26.2 9.7 67 382-448 67-140 (150)
98 1jkx_A GART;, phosphoribosylgl 67.4 8.1 0.00028 33.1 5.5 104 84-206 1-109 (212)
99 1f4p_A Flavodoxin; electron tr 67.3 6.9 0.00024 31.0 4.8 38 84-126 1-38 (147)
100 3ew7_A LMO0794 protein; Q8Y8U8 67.3 6.7 0.00023 33.4 5.1 34 84-127 1-34 (221)
101 3av3_A Phosphoribosylglycinami 67.3 6.2 0.00021 33.9 4.7 104 84-206 4-112 (212)
102 1kjn_A MTH0777; hypotethical p 66.5 15 0.00051 29.1 6.1 41 82-126 5-45 (157)
103 3ilh_A Two component response 65.4 35 0.0012 26.2 8.8 77 372-448 44-139 (146)
104 3h2s_A Putative NADH-flavin re 65.3 7.4 0.00025 33.3 5.0 34 84-127 1-34 (224)
105 1mkz_A Molybdenum cofactor bio 64.8 23 0.0008 29.0 7.6 46 80-129 7-53 (172)
106 3gt7_A Sensor protein; structu 64.8 43 0.0015 26.2 9.3 76 373-448 41-127 (154)
107 3nbm_A PTS system, lactose-spe 64.5 9.7 0.00033 28.6 4.7 40 81-126 4-43 (108)
108 3gl9_A Response regulator; bet 64.3 42 0.0014 25.0 8.9 66 382-447 47-121 (122)
109 1i3c_A Response regulator RCP1 64.3 48 0.0016 25.7 10.2 66 382-447 62-136 (149)
110 1hdo_A Biliverdin IX beta redu 63.9 9.4 0.00032 32.0 5.3 37 83-129 3-39 (206)
111 3hzh_A Chemotaxis response reg 63.7 29 0.001 27.3 8.1 66 382-447 84-156 (157)
112 1fjh_A 3alpha-hydroxysteroid d 63.2 9.1 0.00031 33.6 5.3 35 84-127 1-35 (257)
113 3eul_A Possible nitrate/nitrit 63.0 51 0.0017 25.5 10.3 67 382-448 62-135 (152)
114 3ehd_A Uncharacterized conserv 63.0 21 0.00073 28.9 6.8 69 377-446 65-161 (162)
115 1e2b_A Enzyme IIB-cellobiose; 62.9 16 0.00056 27.2 5.8 42 82-129 2-43 (106)
116 3h1g_A Chemotaxis protein CHEY 62.7 44 0.0015 25.1 8.7 67 382-448 52-127 (129)
117 3da8_A Probable 5'-phosphoribo 62.5 5.7 0.0002 34.1 3.5 107 80-206 9-119 (215)
118 2qzj_A Two-component response 62.2 35 0.0012 26.0 8.1 76 373-448 38-121 (136)
119 1dbw_A Transcriptional regulat 61.6 43 0.0015 24.9 8.4 76 373-448 37-121 (126)
120 3eod_A Protein HNR; response r 61.5 29 0.00098 26.1 7.4 33 80-122 4-36 (130)
121 3i6i_A Putative leucoanthocyan 61.5 7 0.00024 36.3 4.3 38 80-127 7-44 (346)
122 3t6k_A Response regulator rece 61.4 51 0.0018 25.0 9.8 76 373-448 38-124 (136)
123 3hdg_A Uncharacterized protein 61.1 51 0.0017 24.9 9.1 76 373-448 41-125 (137)
124 1ydg_A Trp repressor binding p 61.1 16 0.00053 31.0 6.2 40 83-127 6-45 (211)
125 2dkn_A 3-alpha-hydroxysteroid 60.8 11 0.00036 33.0 5.3 35 84-127 1-35 (255)
126 1lss_A TRK system potassium up 60.7 12 0.00041 29.0 5.1 33 83-126 4-36 (140)
127 2phj_A 5'-nucleotidase SURE; S 60.7 9.1 0.00031 33.6 4.5 38 84-129 2-39 (251)
128 2rdm_A Response regulator rece 60.4 50 0.0017 24.6 9.4 78 371-448 37-123 (132)
129 3mc3_A DSRE/DSRF-like family p 60.4 17 0.00057 28.4 5.7 45 82-129 14-58 (134)
130 2l2q_A PTS system, cellobiose- 60.3 12 0.00041 28.0 4.7 40 83-128 4-43 (109)
131 2qsj_A DNA-binding response re 60.2 50 0.0017 25.7 8.9 77 372-448 38-124 (154)
132 3tem_A Ribosyldihydronicotinam 59.6 16 0.00053 31.7 5.9 43 83-129 1-44 (228)
133 1qkk_A DCTD, C4-dicarboxylate 59.6 46 0.0016 26.0 8.6 67 382-448 48-121 (155)
134 3zqu_A Probable aromatic acid 59.3 17 0.00057 31.0 5.8 38 83-127 4-41 (209)
135 2a5l_A Trp repressor binding p 59.2 17 0.00057 30.5 6.0 39 84-127 6-44 (200)
136 3dqp_A Oxidoreductase YLBE; al 59.1 8.8 0.0003 32.7 4.3 36 84-129 1-36 (219)
137 2zki_A 199AA long hypothetical 59.1 14 0.00049 30.9 5.5 39 83-127 4-42 (199)
138 1jx7_A Hypothetical protein YC 59.0 17 0.00057 27.3 5.4 43 84-129 2-46 (117)
139 3h5i_A Response regulator/sens 58.7 58 0.002 24.8 11.3 77 372-448 38-124 (140)
140 1k66_A Phytochrome response re 58.6 51 0.0017 25.2 8.6 67 382-448 63-138 (149)
141 1mb3_A Cell division response 58.5 52 0.0018 24.2 8.5 76 373-448 35-121 (124)
142 4dzz_A Plasmid partitioning pr 58.4 18 0.00062 30.2 6.2 41 84-128 1-41 (206)
143 2x4g_A Nucleoside-diphosphate- 58.3 13 0.00044 34.2 5.5 37 82-128 12-48 (342)
144 1sbz_A Probable aromatic acid 58.3 15 0.00051 31.0 5.3 37 84-127 1-38 (197)
145 3guy_A Short-chain dehydrogena 58.2 8.6 0.00029 33.2 4.1 35 84-127 1-35 (230)
146 3of5_A Dethiobiotin synthetase 58.1 16 0.00054 31.7 5.7 39 82-124 2-40 (228)
147 2e6c_A 5'-nucleotidase SURE; S 57.9 11 0.00036 33.1 4.4 38 84-129 1-38 (244)
148 3hv2_A Response regulator/HD d 57.8 64 0.0022 25.0 9.8 67 382-448 59-133 (153)
149 3mcu_A Dipicolinate synthase, 57.4 11 0.00036 32.2 4.3 39 83-129 5-45 (207)
150 2pn1_A Carbamoylphosphate synt 57.1 18 0.00061 33.2 6.3 34 81-126 2-37 (331)
151 1j9j_A Stationary phase surviV 57.0 11 0.00039 33.0 4.5 38 84-129 1-38 (247)
152 2q62_A ARSH; alpha/beta, flavo 57.0 20 0.00067 31.5 6.2 44 80-127 31-75 (247)
153 2bln_A Protein YFBG; transfera 56.9 22 0.00075 32.4 6.7 35 84-129 1-35 (305)
154 1p3y_1 MRSD protein; flavoprot 56.7 72 0.0025 26.7 9.3 99 310-413 9-122 (194)
155 3n53_A Response regulator rece 56.6 62 0.0021 24.5 10.0 76 373-448 36-122 (140)
156 3c3m_A Response regulator rece 56.6 63 0.0021 24.5 8.8 76 373-448 37-123 (138)
157 3hdv_A Response regulator; PSI 56.1 57 0.002 24.5 8.4 77 372-448 40-127 (136)
158 3lqk_A Dipicolinate synthase s 55.9 12 0.0004 31.7 4.3 40 83-129 7-47 (201)
159 3m6m_D Sensory/regulatory prot 55.8 67 0.0023 24.6 9.4 76 373-448 48-136 (143)
160 3nhm_A Response regulator; pro 55.2 63 0.0022 24.1 10.8 76 373-448 37-122 (133)
161 3cnb_A DNA-binding response re 55.0 66 0.0023 24.3 9.8 76 373-448 44-130 (143)
162 3kjh_A CO dehydrogenase/acetyl 54.8 9.9 0.00034 33.1 3.9 39 84-128 1-39 (254)
163 3qjg_A Epidermin biosynthesis 54.6 14 0.00048 30.5 4.5 39 84-129 6-44 (175)
164 1l5x_A SurviVal protein E; str 54.4 13 0.00045 33.3 4.6 38 84-129 1-38 (280)
165 3l77_A Short-chain alcohol deh 54.4 15 0.00052 31.6 5.0 35 83-126 1-35 (235)
166 3b6i_A Flavoprotein WRBA; flav 54.3 21 0.00072 29.7 5.8 39 84-127 2-41 (198)
167 1meo_A Phosophoribosylglycinam 53.8 8.5 0.00029 32.9 3.1 104 84-206 1-109 (209)
168 2hy5_B Intracellular sulfur ox 53.8 19 0.00067 28.2 5.0 44 83-129 4-48 (136)
169 3s5p_A Ribose 5-phosphate isom 53.6 26 0.0009 28.4 5.7 41 79-127 17-57 (166)
170 3kht_A Response regulator; PSI 53.6 31 0.0011 26.5 6.5 35 81-125 3-37 (144)
171 3gpi_A NAD-dependent epimerase 53.4 14 0.00047 33.0 4.8 36 83-129 3-38 (286)
172 1zmt_A Haloalcohol dehalogenas 53.3 9.5 0.00032 33.6 3.5 34 84-126 1-34 (254)
173 2rjn_A Response regulator rece 52.6 78 0.0027 24.5 8.9 76 373-448 41-126 (154)
174 4eg0_A D-alanine--D-alanine li 52.6 15 0.0005 33.6 4.8 42 81-124 11-52 (317)
175 3kht_A Response regulator; PSI 52.6 75 0.0026 24.2 9.5 76 373-448 41-128 (144)
176 3d7l_A LIN1944 protein; APC893 52.5 17 0.00058 30.4 4.9 34 82-126 2-35 (202)
177 3gt7_A Sensor protein; structu 51.9 43 0.0015 26.2 7.1 33 81-123 5-37 (154)
178 3orf_A Dihydropteridine reduct 51.8 20 0.00067 31.4 5.4 36 85-129 23-58 (251)
179 3dfz_A SIRC, precorrin-2 dehyd 51.3 1.2E+02 0.004 26.0 10.6 134 327-468 41-187 (223)
180 2j48_A Two-component sensor ki 51.3 28 0.00096 25.3 5.6 73 373-446 35-116 (119)
181 1ehi_A LMDDL2, D-alanine:D-lac 51.3 16 0.00055 34.4 5.0 45 81-127 1-46 (377)
182 1id1_A Putative potassium chan 51.2 17 0.0006 28.8 4.6 34 82-126 2-35 (153)
183 2wqk_A 5'-nucleotidase SURE; S 51.2 61 0.0021 28.4 8.3 37 85-129 3-39 (251)
184 2fb6_A Conserved hypothetical 51.2 15 0.00052 27.9 3.9 43 83-129 7-51 (117)
185 4f3y_A DHPR, dihydrodipicolina 50.7 11 0.00037 33.8 3.4 59 373-433 65-128 (272)
186 2yxb_A Coenzyme B12-dependent 50.7 25 0.00085 28.5 5.4 39 82-126 17-55 (161)
187 1e4e_A Vancomycin/teicoplanin 50.5 10 0.00036 35.2 3.5 45 81-127 1-45 (343)
188 2f62_A Nucleoside 2-deoxyribos 49.9 63 0.0022 26.1 7.6 38 376-413 62-105 (161)
189 4e4y_A Short chain dehydrogena 49.8 54 0.0018 28.3 8.0 36 83-127 3-39 (244)
190 3ko8_A NAD-dependent epimerase 49.8 19 0.00064 32.6 5.1 34 84-127 1-34 (312)
191 2ark_A Flavodoxin; FMN, struct 49.5 30 0.001 28.6 5.9 38 84-126 5-43 (188)
192 3r0j_A Possible two component 49.3 1.1E+02 0.0037 26.3 10.0 66 382-447 68-140 (250)
193 2vzf_A NADH-dependent FMN redu 49.3 27 0.00093 29.2 5.7 41 84-127 3-44 (197)
194 2i87_A D-alanine-D-alanine lig 49.2 9.3 0.00032 35.9 2.9 46 81-128 1-46 (364)
195 3l4b_C TRKA K+ channel protien 49.2 17 0.00057 31.1 4.4 33 84-127 1-33 (218)
196 3rqi_A Response regulator prot 49.2 50 0.0017 26.9 7.3 34 80-123 4-37 (184)
197 1dhr_A Dihydropteridine reduct 49.1 23 0.00078 30.7 5.3 36 84-128 7-42 (241)
198 1ccw_A Protein (glutamate muta 49.0 24 0.00082 27.6 4.9 41 83-129 3-43 (137)
199 2pzm_A Putative nucleotide sug 49.0 22 0.00075 32.5 5.5 38 80-127 17-54 (330)
200 3lua_A Response regulator rece 48.7 25 0.00087 26.9 5.1 67 382-448 51-127 (140)
201 3l6e_A Oxidoreductase, short-c 48.7 21 0.0007 30.9 4.9 34 84-126 3-36 (235)
202 4hb9_A Similarities with proba 48.6 9.8 0.00033 36.0 3.0 33 83-126 1-33 (412)
203 3r5x_A D-alanine--D-alanine li 48.6 16 0.00054 33.2 4.3 44 82-127 2-45 (307)
204 4hs4_A Chromate reductase; tri 48.6 14 0.00047 31.3 3.6 41 81-125 4-45 (199)
205 4e3z_A Putative oxidoreductase 48.4 21 0.00071 31.7 5.1 37 81-126 23-59 (272)
206 4id9_A Short-chain dehydrogena 48.2 17 0.00058 33.5 4.6 37 81-127 17-53 (347)
207 1kjq_A GART 2, phosphoribosylg 48.1 50 0.0017 31.0 8.0 36 82-128 10-45 (391)
208 2fzv_A Putative arsenical resi 48.0 27 0.00094 31.2 5.6 45 81-129 56-101 (279)
209 2vvp_A Ribose-5-phosphate isom 48.0 23 0.00077 28.7 4.5 35 83-125 3-37 (162)
210 2b4a_A BH3024; flavodoxin-like 47.7 86 0.0029 23.6 8.2 66 382-448 61-131 (138)
211 2gkg_A Response regulator homo 47.6 80 0.0027 23.1 8.3 75 373-448 39-125 (127)
212 3i83_A 2-dehydropantoate 2-red 47.6 20 0.00068 32.8 4.9 33 83-126 2-34 (320)
213 2m1z_A LMO0427 protein; homolo 47.4 30 0.001 25.7 4.8 41 83-129 2-45 (106)
214 1rcu_A Conserved hypothetical 47.3 12 0.00041 31.5 3.0 69 374-445 111-192 (195)
215 3oh8_A Nucleoside-diphosphate 47.1 23 0.00079 35.0 5.6 37 83-129 147-183 (516)
216 1zgh_A Methionyl-tRNA formyltr 47.0 13 0.00043 33.0 3.2 37 80-124 27-63 (260)
217 3cfy_A Putative LUXO repressor 46.9 91 0.0031 23.5 10.6 76 373-448 38-122 (137)
218 3fni_A Putative diflavin flavo 46.9 47 0.0016 26.6 6.5 40 83-127 4-43 (159)
219 2hna_A Protein MIOC, flavodoxi 46.7 21 0.00073 28.1 4.4 36 84-124 2-37 (147)
220 3nrb_A Formyltetrahydrofolate 46.6 78 0.0027 28.4 8.4 106 81-206 86-195 (287)
221 2qr3_A Two-component system re 46.6 81 0.0028 23.7 7.9 77 372-448 36-126 (140)
222 3ruf_A WBGU; rossmann fold, UD 46.5 22 0.00075 32.8 5.1 37 82-128 24-60 (351)
223 3sc6_A DTDP-4-dehydrorhamnose 46.4 11 0.00037 33.7 2.8 33 83-125 5-37 (287)
224 2z1m_A GDP-D-mannose dehydrata 46.4 23 0.0008 32.4 5.2 36 83-128 3-38 (345)
225 3fwz_A Inner membrane protein 46.3 26 0.00088 27.3 4.8 35 83-128 7-41 (140)
226 1jay_A Coenzyme F420H2:NADP+ o 46.3 23 0.0008 29.9 4.8 33 84-126 1-33 (212)
227 3i4f_A 3-oxoacyl-[acyl-carrier 46.0 23 0.0008 31.1 5.0 36 83-127 6-41 (264)
228 3m2p_A UDP-N-acetylglucosamine 45.9 23 0.0008 32.0 5.1 34 83-126 2-35 (311)
229 3rfo_A Methionyl-tRNA formyltr 45.8 22 0.00076 32.5 4.8 36 83-129 4-39 (317)
230 3qvo_A NMRA family protein; st 45.7 20 0.0007 30.9 4.4 38 83-129 22-60 (236)
231 2qvg_A Two component response 45.7 95 0.0033 23.4 9.0 84 363-448 35-135 (143)
232 3ea0_A ATPase, para family; al 45.6 29 0.001 29.9 5.5 43 82-128 2-45 (245)
233 3vps_A TUNA, NAD-dependent epi 45.6 20 0.00069 32.4 4.6 36 83-128 7-42 (321)
234 3rft_A Uronate dehydrogenase; 45.4 19 0.00064 31.9 4.2 38 83-129 2-39 (267)
235 3obi_A Formyltetrahydrofolate 45.4 83 0.0028 28.2 8.4 106 80-206 86-196 (288)
236 2gdz_A NAD+-dependent 15-hydro 45.4 26 0.00088 30.9 5.2 33 85-126 8-40 (267)
237 3ic5_A Putative saccharopine d 45.4 36 0.0012 25.1 5.4 34 83-127 5-39 (118)
238 3f6p_A Transcriptional regulat 45.3 88 0.003 22.9 8.0 75 373-447 36-118 (120)
239 2r85_A PURP protein PF1517; AT 45.1 16 0.00055 33.5 3.9 33 83-127 2-34 (334)
240 3luf_A Two-component system re 45.1 1.5E+02 0.0052 25.6 11.3 106 341-448 123-245 (259)
241 2ew2_A 2-dehydropantoate 2-red 45.1 22 0.00074 32.2 4.7 33 83-126 3-35 (316)
242 1iow_A DD-ligase, DDLB, D-ALA\ 45.0 33 0.0011 30.8 6.0 39 83-126 2-43 (306)
243 1ys7_A Transcriptional regulat 45.0 1.4E+02 0.0047 25.1 10.9 76 373-448 41-125 (233)
244 3fgn_A Dethiobiotin synthetase 44.6 34 0.0012 30.0 5.7 41 81-125 23-63 (251)
245 1t0i_A YLR011WP; FMN binding p 44.4 37 0.0013 28.0 5.8 41 84-127 1-47 (191)
246 1bg6_A N-(1-D-carboxylethyl)-L 44.3 23 0.00078 32.9 4.8 35 81-126 2-36 (359)
247 1tvm_A PTS system, galactitol- 44.2 63 0.0021 24.2 6.4 43 81-129 19-62 (113)
248 2qxy_A Response regulator; reg 44.2 89 0.0031 23.6 7.8 66 382-448 49-121 (142)
249 1xjc_A MOBB protein homolog; s 44.1 37 0.0013 27.7 5.5 42 82-128 2-43 (169)
250 3svl_A Protein YIEF; E. coli C 44.1 10 0.00035 31.9 2.1 41 82-126 3-44 (193)
251 1d4a_A DT-diaphorase, quinone 43.9 45 0.0016 29.6 6.5 42 84-129 3-45 (273)
252 4em8_A Ribose 5-phosphate isom 43.9 45 0.0015 26.5 5.6 38 81-126 5-42 (148)
253 3ghy_A Ketopantoate reductase 43.8 18 0.00062 33.4 4.0 33 82-125 2-34 (335)
254 1ks9_A KPA reductase;, 2-dehyd 43.7 28 0.00094 31.1 5.2 33 84-127 1-33 (291)
255 3k4h_A Putative transcriptiona 43.7 1.6E+02 0.0056 25.6 13.0 39 82-124 7-50 (292)
256 1jg7_A BGT, DNA beta-glucosylt 43.6 1.5E+02 0.0051 25.1 22.6 145 312-466 182-333 (351)
257 3to5_A CHEY homolog; alpha(5)b 43.6 34 0.0012 26.6 5.0 66 382-447 58-132 (134)
258 4egb_A DTDP-glucose 4,6-dehydr 43.5 59 0.002 29.7 7.6 33 82-124 23-55 (346)
259 2qv0_A Protein MRKE; structura 43.4 1E+02 0.0036 23.2 10.8 76 373-448 45-127 (143)
260 1rpn_A GDP-mannose 4,6-dehydra 43.4 29 0.00098 31.7 5.3 39 80-128 11-49 (335)
261 1wma_A Carbonyl reductase [NAD 43.1 28 0.00095 30.6 5.1 35 83-126 3-38 (276)
262 3r6d_A NAD-dependent epimerase 43.1 28 0.00095 29.5 4.9 36 84-128 5-41 (221)
263 3sju_A Keto reductase; short-c 43.0 27 0.00093 31.1 4.9 37 81-126 21-57 (279)
264 3kkl_A Probable chaperone prot 42.9 54 0.0018 28.6 6.7 44 84-127 4-52 (244)
265 3lcm_A SMU.1420, putative oxid 42.7 35 0.0012 28.5 5.3 41 84-129 1-42 (196)
266 3cu5_A Two component transcrip 42.5 1.1E+02 0.0037 23.2 8.7 76 373-448 39-123 (141)
267 3cg0_A Response regulator rece 42.3 1.1E+02 0.0036 23.0 8.8 76 373-448 44-128 (140)
268 1yxm_A Pecra, peroxisomal tran 42.1 41 0.0014 30.2 6.1 33 85-126 19-51 (303)
269 1e6u_A GDP-fucose synthetase; 42.1 19 0.00065 32.7 3.9 33 82-124 2-34 (321)
270 2v6g_A Progesterone 5-beta-red 42.0 76 0.0026 29.1 8.2 36 84-129 2-42 (364)
271 2b69_A UDP-glucuronate decarbo 41.9 32 0.0011 31.6 5.4 36 82-127 26-61 (343)
272 3slg_A PBGP3 protein; structur 41.9 26 0.00088 32.6 4.8 39 81-129 22-61 (372)
273 3ph3_A Ribose-5-phosphate isom 41.9 39 0.0013 27.5 5.0 39 80-126 17-55 (169)
274 2ejb_A Probable aromatic acid 41.8 45 0.0015 27.8 5.7 36 85-127 3-38 (189)
275 1sqs_A Conserved hypothetical 41.8 37 0.0013 29.5 5.5 42 84-129 2-45 (242)
276 1z82_A Glycerol-3-phosphate de 41.5 28 0.00095 32.1 4.9 36 80-126 11-46 (335)
277 3rqi_A Response regulator prot 41.5 71 0.0024 25.9 7.1 67 382-448 52-125 (184)
278 3i12_A D-alanine-D-alanine lig 41.3 17 0.0006 34.0 3.5 46 81-128 1-46 (364)
279 3k3p_A D-alanine--D-alanine li 41.2 17 0.00058 34.4 3.4 47 80-128 34-80 (383)
280 1y5e_A Molybdenum cofactor bio 41.1 68 0.0023 26.0 6.7 45 81-129 11-56 (169)
281 2h54_A Caspase-1; allosteric s 41.1 83 0.0028 25.9 7.1 42 84-125 43-86 (178)
282 3f2v_A General stress protein 41.0 14 0.00048 31.1 2.4 39 84-127 2-40 (192)
283 1ooe_A Dihydropteridine reduct 40.8 40 0.0014 29.0 5.6 35 85-128 4-38 (236)
284 1qzu_A Hypothetical protein MD 40.5 28 0.00096 29.5 4.3 42 81-129 17-59 (206)
285 1bvy_F Protein (cytochrome P45 40.5 27 0.00092 29.2 4.2 40 83-127 21-60 (191)
286 3a10_A Response regulator; pho 40.4 1E+02 0.0034 22.2 8.6 74 373-446 35-115 (116)
287 1mvl_A PPC decarboxylase athal 40.4 34 0.0012 29.1 4.8 41 81-129 17-57 (209)
288 2iz6_A Molybdenum cofactor car 40.3 7.8 0.00027 32.1 0.7 68 378-448 104-174 (176)
289 3enk_A UDP-glucose 4-epimerase 40.3 34 0.0012 31.3 5.3 36 83-128 5-40 (341)
290 3dff_A Teicoplanin pseudoaglyc 40.2 52 0.0018 29.3 6.3 42 82-129 6-47 (273)
291 3bfv_A CAPA1, CAPB2, membrane 40.2 51 0.0018 29.2 6.3 44 81-128 79-122 (271)
292 1vl8_A Gluconate 5-dehydrogena 40.2 36 0.0012 30.0 5.3 34 84-126 21-54 (267)
293 3gk3_A Acetoacetyl-COA reducta 40.2 31 0.0011 30.5 4.8 36 82-126 23-58 (269)
294 3doj_A AT3G25530, dehydrogenas 40.1 28 0.00097 31.6 4.6 36 81-127 19-54 (310)
295 2rhc_B Actinorhodin polyketide 40.0 43 0.0015 29.7 5.8 33 85-126 23-55 (277)
296 1g63_A Epidermin modifying enz 39.8 24 0.00081 29.3 3.6 38 85-129 4-41 (181)
297 3oid_A Enoyl-[acyl-carrier-pro 39.8 35 0.0012 29.9 5.1 33 84-125 4-36 (258)
298 1rkx_A CDP-glucose-4,6-dehydra 39.8 32 0.0011 31.7 5.1 37 83-129 9-45 (357)
299 2gk4_A Conserved hypothetical 39.7 35 0.0012 29.5 4.8 28 98-128 27-54 (232)
300 3jvd_A Transcriptional regulat 39.7 1.9E+02 0.0064 26.1 10.4 43 81-127 62-104 (333)
301 3ijp_A DHPR, dihydrodipicolina 39.7 13 0.00045 33.5 2.2 59 373-433 80-143 (288)
302 1y1p_A ARII, aldehyde reductas 39.6 44 0.0015 30.4 6.0 36 81-126 9-44 (342)
303 1wcv_1 SOJ, segregation protei 39.5 36 0.0012 29.8 5.1 43 82-128 4-46 (257)
304 2gwr_A DNA-binding response re 39.5 1.2E+02 0.0039 25.8 8.5 67 382-448 50-122 (238)
305 3iwt_A 178AA long hypothetical 39.5 73 0.0025 26.0 6.7 50 80-129 12-65 (178)
306 1cp2_A CP2, nitrogenase iron p 39.4 42 0.0014 29.5 5.6 41 84-129 1-41 (269)
307 3m1a_A Putative dehydrogenase; 39.2 32 0.0011 30.5 4.8 36 83-127 4-39 (281)
308 1zgz_A Torcad operon transcrip 39.2 1.1E+02 0.0037 22.2 9.2 75 373-447 36-118 (122)
309 2afh_E Nitrogenase iron protei 39.2 45 0.0015 29.7 5.8 41 84-129 2-42 (289)
310 3hn2_A 2-dehydropantoate 2-red 39.1 25 0.00085 32.0 4.1 33 83-126 2-34 (312)
311 1dcf_A ETR1 protein; beta-alph 39.1 76 0.0026 23.8 6.6 66 383-448 52-129 (136)
312 2d1p_B TUSC, hypothetical UPF0 39.1 44 0.0015 25.3 4.9 42 85-129 3-44 (119)
313 2lpm_A Two-component response 39.0 27 0.00091 26.8 3.6 73 373-446 43-120 (123)
314 3n7t_A Macrophage binding prot 39.0 62 0.0021 28.3 6.4 44 84-127 10-58 (247)
315 2vns_A Metalloreductase steap3 38.9 28 0.00097 29.6 4.2 36 80-126 25-60 (215)
316 2bka_A CC3, TAT-interacting pr 38.9 34 0.0011 29.4 4.8 37 83-129 18-56 (242)
317 2ph3_A 3-oxoacyl-[acyl carrier 38.8 27 0.00092 30.1 4.2 32 84-124 1-32 (245)
318 3m6m_D Sensory/regulatory prot 38.7 35 0.0012 26.3 4.5 35 79-123 10-44 (143)
319 3ego_A Probable 2-dehydropanto 38.6 32 0.0011 31.2 4.7 33 83-127 2-34 (307)
320 1qo0_D AMIR; binding protein, 38.3 1.2E+02 0.0041 24.7 8.1 67 381-448 52-125 (196)
321 2p5y_A UDP-glucose 4-epimerase 38.2 29 0.00099 31.3 4.4 32 84-125 1-32 (311)
322 1p2f_A Response regulator; DRR 38.1 72 0.0024 26.7 6.8 69 380-448 42-117 (220)
323 3ius_A Uncharacterized conserv 38.0 30 0.001 30.7 4.4 34 83-127 5-38 (286)
324 2ehd_A Oxidoreductase, oxidore 38.0 36 0.0012 29.1 4.8 33 85-126 6-38 (234)
325 3un1_A Probable oxidoreductase 37.9 43 0.0015 29.4 5.4 36 84-128 28-63 (260)
326 1ykg_A SIR-FP, sulfite reducta 37.8 21 0.00071 29.0 3.0 38 84-126 10-47 (167)
327 3n0r_A Response regulator; sig 37.6 2.2E+02 0.0074 25.2 11.3 115 331-448 150-277 (286)
328 2r25_B Osmosensing histidine p 37.4 1.1E+02 0.0037 22.9 7.2 67 382-448 53-127 (133)
329 2vrn_A Protease I, DR1199; cys 37.4 69 0.0023 26.3 6.3 43 80-129 6-48 (190)
330 1fjk_A Cardiac phospholamban; 37.2 21 0.00072 21.4 2.0 19 15-33 31-49 (52)
331 3tfo_A Putative 3-oxoacyl-(acy 37.2 40 0.0014 29.8 5.0 34 84-126 4-37 (264)
332 2rh8_A Anthocyanidin reductase 37.2 43 0.0015 30.5 5.5 34 83-126 9-42 (338)
333 3o1l_A Formyltetrahydrofolate 37.1 82 0.0028 28.5 7.0 105 81-206 103-211 (302)
334 3vot_A L-amino acid ligase, BL 37.1 42 0.0014 32.0 5.5 36 83-129 5-40 (425)
335 2g1u_A Hypothetical protein TM 37.0 45 0.0015 26.4 4.9 37 81-128 17-53 (155)
336 3p0r_A Azoreductase; structura 36.9 47 0.0016 28.1 5.2 44 84-129 5-51 (211)
337 3i42_A Response regulator rece 36.9 52 0.0018 24.4 5.1 35 81-125 1-35 (127)
338 3e5n_A D-alanine-D-alanine lig 36.8 23 0.00077 33.6 3.5 47 80-128 19-65 (386)
339 2ydy_A Methionine adenosyltran 36.8 32 0.0011 31.0 4.5 32 84-125 3-34 (315)
340 1y80_A Predicted cobalamin bin 36.7 48 0.0017 28.0 5.3 39 82-126 87-125 (210)
341 3osu_A 3-oxoacyl-[acyl-carrier 36.7 44 0.0015 28.9 5.2 33 85-126 5-37 (246)
342 1s5p_A NAD-dependent deacetyla 36.7 1E+02 0.0035 26.6 7.5 77 362-442 146-226 (235)
343 1p3y_1 MRSD protein; flavoprot 36.7 29 0.00098 29.2 3.7 38 83-127 8-45 (194)
344 2hun_A 336AA long hypothetical 36.6 30 0.001 31.5 4.3 35 82-126 2-38 (336)
345 3end_A Light-independent proto 36.6 54 0.0018 29.5 5.9 44 81-129 38-81 (307)
346 3i1j_A Oxidoreductase, short c 36.5 51 0.0018 28.4 5.6 34 84-126 14-47 (247)
347 3c1o_A Eugenol synthase; pheny 36.5 33 0.0011 31.1 4.5 35 83-127 4-38 (321)
348 3sxp_A ADP-L-glycero-D-mannohe 36.4 58 0.002 30.0 6.3 37 82-128 9-47 (362)
349 2pk3_A GDP-6-deoxy-D-LYXO-4-he 36.4 41 0.0014 30.4 5.2 27 98-127 20-46 (321)
350 3qxc_A Dethiobiotin synthetase 36.2 55 0.0019 28.5 5.6 39 82-124 19-57 (242)
351 1jbe_A Chemotaxis protein CHEY 36.1 78 0.0027 23.3 6.1 66 382-447 50-124 (128)
352 3cz5_A Two-component response 36.0 1.5E+02 0.005 22.8 10.2 76 373-448 41-125 (153)
353 3l18_A Intracellular protease 36.0 69 0.0024 25.7 6.0 39 83-128 2-40 (168)
354 3hwr_A 2-dehydropantoate 2-red 36.0 34 0.0012 31.2 4.5 33 80-123 16-48 (318)
355 3k9g_A PF-32 protein; ssgcid, 35.9 48 0.0017 29.1 5.4 44 81-129 24-67 (267)
356 3k96_A Glycerol-3-phosphate de 35.9 30 0.001 32.3 4.1 35 81-126 27-61 (356)
357 2pl1_A Transcriptional regulat 35.8 1.2E+02 0.0042 21.8 9.9 76 373-448 34-118 (121)
358 2ph1_A Nucleotide-binding prot 35.7 64 0.0022 28.2 6.2 42 84-129 18-59 (262)
359 1o5i_A 3-oxoacyl-(acyl carrier 35.6 46 0.0016 28.9 5.1 34 84-126 19-52 (249)
360 3dfi_A Pseudoaglycone deacetyl 35.5 73 0.0025 28.2 6.5 42 82-129 6-47 (270)
361 3tpc_A Short chain alcohol deh 35.4 48 0.0016 28.9 5.3 36 85-129 8-43 (257)
362 2i2x_B MTAC, methyltransferase 35.4 69 0.0024 28.1 6.3 43 81-129 121-163 (258)
363 1s8n_A Putative antiterminator 35.2 1.8E+02 0.0063 23.7 11.2 67 382-448 59-131 (205)
364 1gsa_A Glutathione synthetase; 35.2 29 0.001 31.2 3.9 40 84-126 2-41 (316)
365 3crn_A Response regulator rece 35.2 1.4E+02 0.0047 22.2 10.3 76 373-448 37-121 (132)
366 1r5j_A Putative phosphotransac 35.2 16 0.00054 33.9 2.0 90 304-404 202-293 (337)
367 3q9l_A Septum site-determining 35.1 62 0.0021 28.0 6.0 40 84-127 2-41 (260)
368 3mm4_A Histidine kinase homolo 35.1 1.4E+02 0.0048 24.7 8.1 65 382-448 120-196 (206)
369 1t5b_A Acyl carrier protein ph 35.1 58 0.002 26.9 5.6 42 84-129 2-47 (201)
370 3cwq_A Para family chromosome 35.0 58 0.002 27.4 5.6 39 84-128 1-39 (209)
371 1udb_A Epimerase, UDP-galactos 35.0 39 0.0013 30.8 4.8 32 84-125 1-32 (338)
372 3g0o_A 3-hydroxyisobutyrate de 35.0 41 0.0014 30.3 4.8 35 81-126 5-39 (303)
373 2nzw_A Alpha1,3-fucosyltransfe 35.0 45 0.0015 31.2 5.0 81 374-457 224-308 (371)
374 2hpv_A FMN-dependent NADH-azor 34.9 51 0.0017 27.6 5.2 39 84-126 2-45 (208)
375 1kgs_A DRRD, DNA binding respo 34.8 1.9E+02 0.0067 23.9 9.9 75 373-447 36-119 (225)
376 3dtt_A NADP oxidoreductase; st 34.8 47 0.0016 28.8 5.1 36 80-126 16-51 (245)
377 2z06_A Putative uncharacterize 34.7 1.9E+02 0.0066 25.2 8.8 92 313-417 2-105 (252)
378 1g3q_A MIND ATPase, cell divis 34.6 68 0.0023 27.3 6.1 40 85-128 3-42 (237)
379 1n7h_A GDP-D-mannose-4,6-dehyd 34.6 43 0.0015 31.2 5.1 27 98-127 36-62 (381)
380 2gkg_A Response regulator homo 34.6 48 0.0016 24.4 4.6 33 81-123 3-35 (127)
381 2prs_A High-affinity zinc upta 34.6 82 0.0028 28.1 6.7 107 374-484 41-172 (284)
382 1evy_A Glycerol-3-phosphate de 34.5 33 0.0011 32.0 4.2 36 80-126 11-47 (366)
383 2cfc_A 2-(R)-hydroxypropyl-COM 34.4 47 0.0016 28.6 5.0 33 85-126 3-35 (250)
384 2nm0_A Probable 3-oxacyl-(acyl 34.4 55 0.0019 28.5 5.5 35 84-127 21-55 (253)
385 1cyd_A Carbonyl reductase; sho 34.3 58 0.002 27.9 5.6 26 98-126 15-40 (244)
386 1gy8_A UDP-galactose 4-epimera 34.3 51 0.0017 30.9 5.6 35 83-127 2-37 (397)
387 1p9o_A Phosphopantothenoylcyst 34.2 42 0.0014 30.6 4.6 26 103-128 65-90 (313)
388 3n0v_A Formyltetrahydrofolate 34.2 76 0.0026 28.4 6.3 106 80-206 87-196 (286)
389 2vvr_A Ribose-5-phosphate isom 34.1 40 0.0014 26.8 3.9 34 84-125 2-35 (149)
390 3t7c_A Carveol dehydrogenase; 34.0 48 0.0017 29.8 5.2 35 84-127 28-62 (299)
391 1t2a_A GDP-mannose 4,6 dehydra 34.0 45 0.0015 31.0 5.1 28 98-128 32-59 (375)
392 2a35_A Hypothetical protein PA 33.9 41 0.0014 28.1 4.4 34 83-126 5-40 (215)
393 3eod_A Protein HNR; response r 33.9 1.4E+02 0.0048 21.9 8.4 76 373-448 41-126 (130)
394 1uzm_A 3-oxoacyl-[acyl-carrier 33.8 67 0.0023 27.8 5.9 34 85-127 16-49 (247)
395 4had_A Probable oxidoreductase 33.7 31 0.0011 31.8 3.9 90 311-413 23-117 (350)
396 4e21_A 6-phosphogluconate dehy 33.7 40 0.0014 31.4 4.6 35 81-126 20-54 (358)
397 2ayx_A Sensor kinase protein R 33.7 2.3E+02 0.0078 24.3 11.8 67 382-448 174-247 (254)
398 3g17_A Similar to 2-dehydropan 33.7 22 0.00076 32.0 2.8 34 83-127 2-35 (294)
399 3r6w_A FMN-dependent NADH-azor 33.6 55 0.0019 27.6 5.2 42 84-129 2-47 (212)
400 3h7a_A Short chain dehydrogena 33.6 50 0.0017 28.8 5.0 35 84-127 7-41 (252)
401 1zmo_A Halohydrin dehalogenase 33.5 33 0.0011 29.7 3.9 31 84-123 1-31 (244)
402 1sny_A Sniffer CG10964-PA; alp 33.5 48 0.0016 29.0 5.0 38 82-128 19-59 (267)
403 1qyd_A Pinoresinol-lariciresin 33.5 38 0.0013 30.5 4.4 35 83-127 4-38 (313)
404 4huj_A Uncharacterized protein 33.4 40 0.0014 28.7 4.3 34 81-125 21-54 (220)
405 1sb8_A WBPP; epimerase, 4-epim 33.4 45 0.0015 30.7 4.9 35 83-127 27-61 (352)
406 1vl0_A DTDP-4-dehydrorhamnose 33.3 32 0.0011 30.6 3.8 37 80-126 9-45 (292)
407 3p9x_A Phosphoribosylglycinami 33.3 68 0.0023 27.3 5.5 104 84-206 3-111 (211)
408 2c20_A UDP-glucose 4-epimerase 33.2 48 0.0016 30.0 5.1 26 99-127 10-35 (330)
409 3ug7_A Arsenical pump-driving 33.2 66 0.0022 29.8 6.0 31 98-128 35-65 (349)
410 3o26_A Salutaridine reductase; 33.1 44 0.0015 29.9 4.8 36 83-127 11-46 (311)
411 1xq6_A Unknown protein; struct 33.1 59 0.002 27.9 5.5 26 98-126 12-39 (253)
412 1w6u_A 2,4-dienoyl-COA reducta 33.0 64 0.0022 28.8 5.9 33 85-126 27-59 (302)
413 3iqw_A Tail-anchored protein t 33.0 52 0.0018 30.3 5.2 40 83-127 15-54 (334)
414 3tzq_B Short-chain type dehydr 32.9 56 0.0019 28.8 5.3 35 84-127 11-45 (271)
415 3glr_A NAD-dependent deacetyla 32.9 59 0.002 29.1 5.3 101 361-464 174-280 (285)
416 2raf_A Putative dinucleotide-b 32.8 55 0.0019 27.6 5.0 34 81-125 17-50 (209)
417 1srr_A SPO0F, sporulation resp 32.8 1.4E+02 0.0049 21.7 8.4 76 373-448 37-121 (124)
418 3bq9_A Predicted rossmann fold 32.7 47 0.0016 31.8 4.8 80 365-448 230-332 (460)
419 1uay_A Type II 3-hydroxyacyl-C 32.7 46 0.0016 28.4 4.7 26 98-126 10-35 (242)
420 2d1y_A Hypothetical protein TT 32.7 55 0.0019 28.5 5.2 33 85-126 7-39 (256)
421 3dfu_A Uncharacterized protein 32.7 36 0.0012 29.5 3.8 33 82-125 5-37 (232)
422 2dtx_A Glucose 1-dehydrogenase 32.6 59 0.002 28.5 5.4 33 85-126 9-41 (264)
423 2qyt_A 2-dehydropantoate 2-red 32.6 35 0.0012 30.9 4.0 33 82-125 7-45 (317)
424 1mvo_A PHOP response regulator 32.5 1.5E+02 0.0052 21.9 10.3 76 373-448 37-121 (136)
425 3zq6_A Putative arsenical pump 32.5 59 0.002 29.7 5.5 41 83-128 12-53 (324)
426 1hyq_A MIND, cell division inh 32.5 72 0.0025 27.8 6.0 39 85-127 3-41 (263)
427 2q1s_A Putative nucleotide sug 32.3 51 0.0018 30.7 5.2 35 83-127 32-67 (377)
428 3f1l_A Uncharacterized oxidore 32.1 71 0.0024 27.7 5.8 34 84-126 12-45 (252)
429 1xgk_A Nitrogen metabolite rep 32.1 47 0.0016 30.7 4.9 35 83-127 5-39 (352)
430 2nwq_A Probable short-chain de 32.1 50 0.0017 29.2 4.8 33 85-126 22-54 (272)
431 3pg5_A Uncharacterized protein 32.0 50 0.0017 30.7 5.0 40 84-129 1-42 (361)
432 1p6q_A CHEY2; chemotaxis, sign 31.9 1.5E+02 0.0051 21.7 7.3 76 373-448 41-127 (129)
433 3cio_A ETK, tyrosine-protein k 31.9 71 0.0024 28.8 5.9 43 82-128 102-144 (299)
434 4e5v_A Putative THUA-like prot 31.9 79 0.0027 28.2 6.0 40 82-126 3-43 (281)
435 3f9i_A 3-oxoacyl-[acyl-carrier 31.8 58 0.002 28.1 5.2 35 83-126 13-47 (249)
436 3f6c_A Positive transcription 31.7 1.6E+02 0.0053 21.8 9.1 68 381-448 46-120 (134)
437 2ekp_A 2-deoxy-D-gluconate 3-d 31.7 58 0.002 27.9 5.1 33 85-126 3-35 (239)
438 3se7_A VANA; alpha-beta struct 31.7 31 0.0011 31.9 3.5 45 82-128 2-46 (346)
439 2xj4_A MIPZ; replication, cell 31.6 73 0.0025 28.3 5.9 40 84-127 4-43 (286)
440 4imr_A 3-oxoacyl-(acyl-carrier 31.5 56 0.0019 28.9 5.1 36 84-128 33-68 (275)
441 3qiv_A Short-chain dehydrogena 31.5 53 0.0018 28.4 4.9 34 84-126 9-42 (253)
442 3ezl_A Acetoacetyl-COA reducta 31.5 58 0.002 28.2 5.1 35 83-126 12-46 (256)
443 4da9_A Short-chain dehydrogena 31.5 50 0.0017 29.4 4.7 33 84-125 29-61 (280)
444 1fy2_A Aspartyl dipeptidase; s 31.5 93 0.0032 26.7 6.3 40 374-413 72-120 (229)
445 3vtz_A Glucose 1-dehydrogenase 31.5 61 0.0021 28.5 5.3 37 84-129 14-50 (269)
446 2r8r_A Sensor protein; KDPD, P 31.5 92 0.0031 26.8 6.1 41 83-129 6-46 (228)
447 1orr_A CDP-tyvelose-2-epimeras 31.4 44 0.0015 30.5 4.5 25 98-125 9-33 (347)
448 3eag_A UDP-N-acetylmuramate:L- 31.4 60 0.0021 29.7 5.4 35 83-127 4-38 (326)
449 3he8_A Ribose-5-phosphate isom 31.4 73 0.0025 25.3 5.0 35 84-126 1-35 (149)
450 2bll_A Protein YFBG; decarboxy 31.4 52 0.0018 30.0 5.0 34 84-127 1-35 (345)
451 3pdi_B Nitrogenase MOFE cofact 31.4 1.6E+02 0.0054 28.5 8.5 74 103-198 322-395 (458)
452 2fwm_X 2,3-dihydro-2,3-dihydro 31.3 61 0.0021 28.1 5.2 33 85-126 8-40 (250)
453 1n2s_A DTDP-4-, DTDP-glucose o 31.3 36 0.0012 30.4 3.8 32 84-126 1-32 (299)
454 2ew8_A (S)-1-phenylethanol deh 31.3 59 0.002 28.2 5.1 34 85-127 8-41 (249)
455 1yb1_A 17-beta-hydroxysteroid 31.2 68 0.0023 28.2 5.6 33 85-126 32-64 (272)
456 2o23_A HADH2 protein; HSD17B10 31.1 60 0.0021 28.2 5.2 34 85-127 13-46 (265)
457 1ek6_A UDP-galactose 4-epimera 31.1 53 0.0018 30.0 5.0 33 84-126 3-35 (348)
458 1nff_A Putative oxidoreductase 31.0 56 0.0019 28.6 4.9 33 85-126 8-40 (260)
459 2zat_A Dehydrogenase/reductase 31.0 53 0.0018 28.6 4.8 33 85-126 15-47 (260)
460 2p2s_A Putative oxidoreductase 30.9 97 0.0033 28.2 6.8 37 81-127 2-38 (336)
461 3e03_A Short chain dehydrogena 30.8 64 0.0022 28.5 5.3 36 85-129 7-42 (274)
462 3dii_A Short-chain dehydrogena 30.7 58 0.002 28.2 4.9 33 85-126 3-35 (247)
463 2r6j_A Eugenol synthase 1; phe 30.7 49 0.0017 29.9 4.6 33 85-127 13-45 (318)
464 2wsb_A Galactitol dehydrogenas 30.6 57 0.0019 28.2 4.9 33 85-126 12-44 (254)
465 3sx2_A Putative 3-ketoacyl-(ac 30.6 63 0.0022 28.5 5.3 33 85-126 14-46 (278)
466 2jah_A Clavulanic acid dehydro 30.5 58 0.002 28.2 4.9 33 85-126 8-40 (247)
467 1rtt_A Conserved hypothetical 30.5 32 0.0011 28.5 3.1 41 82-127 5-46 (193)
468 1uls_A Putative 3-oxoacyl-acyl 30.4 59 0.002 28.1 4.9 33 85-126 6-38 (245)
469 3d3k_A Enhancer of mRNA-decapp 30.4 82 0.0028 27.7 5.8 36 85-127 87-122 (259)
470 1iy8_A Levodione reductase; ox 30.4 58 0.002 28.6 4.9 33 85-126 14-46 (267)
471 3e48_A Putative nucleoside-dip 30.4 36 0.0012 30.3 3.6 36 84-129 1-37 (289)
472 3ezx_A MMCP 1, monomethylamine 30.2 87 0.003 26.6 5.8 60 81-184 90-149 (215)
473 3p19_A BFPVVD8, putative blue 30.2 51 0.0017 29.0 4.5 33 85-126 17-49 (266)
474 1rw7_A YDR533CP; alpha-beta sa 30.2 86 0.0029 27.1 5.9 45 84-128 4-53 (243)
475 1h5q_A NADP-dependent mannitol 30.0 69 0.0024 27.8 5.4 33 85-126 15-47 (265)
476 4dad_A Putative pilus assembly 29.9 62 0.0021 24.8 4.6 68 381-448 67-141 (146)
477 3d3j_A Enhancer of mRNA-decapp 29.8 84 0.0029 28.5 5.9 36 85-127 134-169 (306)
478 2ae2_A Protein (tropinone redu 29.8 59 0.002 28.3 4.9 33 85-126 10-42 (260)
479 4dll_A 2-hydroxy-3-oxopropiona 29.8 61 0.0021 29.5 5.1 35 81-126 29-63 (320)
480 1u9c_A APC35852; structural ge 29.8 77 0.0026 26.9 5.5 46 84-129 6-54 (224)
481 4e6p_A Probable sorbitol dehyd 29.8 60 0.0021 28.3 4.9 33 85-126 9-41 (259)
482 3jte_A Response regulator rece 29.7 78 0.0027 24.0 5.2 33 82-124 2-34 (143)
483 3ai3_A NADPH-sorbose reductase 29.7 60 0.0021 28.3 4.9 33 85-126 8-40 (263)
484 3tqt_A D-alanine--D-alanine li 29.7 37 0.0013 31.9 3.6 46 81-128 2-47 (372)
485 3lou_A Formyltetrahydrofolate 29.7 1.1E+02 0.0036 27.6 6.4 106 80-206 92-201 (292)
486 3cky_A 2-hydroxymethyl glutara 29.6 59 0.002 29.1 5.0 33 82-125 3-35 (301)
487 4iin_A 3-ketoacyl-acyl carrier 29.6 74 0.0025 27.9 5.5 34 84-126 29-62 (271)
488 3edm_A Short chain dehydrogena 29.5 67 0.0023 28.0 5.2 33 85-126 9-41 (259)
489 3io3_A DEHA2D07832P; chaperone 29.5 75 0.0026 29.4 5.7 41 82-127 16-58 (348)
490 3ppi_A 3-hydroxyacyl-COA dehyd 29.5 67 0.0023 28.3 5.3 33 85-126 31-63 (281)
491 3m2t_A Probable dehydrogenase; 29.4 62 0.0021 30.0 5.2 92 312-413 6-99 (359)
492 4dqx_A Probable oxidoreductase 29.4 62 0.0021 28.7 5.0 34 84-126 27-60 (277)
493 3asu_A Short-chain dehydrogena 29.3 59 0.002 28.2 4.7 32 86-126 2-33 (248)
494 4b79_A PA4098, probable short- 29.3 75 0.0026 27.6 5.3 36 85-129 12-47 (242)
495 2z1n_A Dehydrogenase; reductas 29.3 62 0.0021 28.2 4.9 33 85-126 8-40 (260)
496 3q9s_A DNA-binding response re 29.2 1.7E+02 0.0057 25.1 7.8 67 382-448 82-154 (249)
497 3rd5_A Mypaa.01249.C; ssgcid, 29.2 74 0.0025 28.3 5.5 34 85-127 17-50 (291)
498 3icc_A Putative 3-oxoacyl-(acy 29.2 71 0.0024 27.6 5.3 35 84-127 7-41 (255)
499 3awd_A GOX2181, putative polyo 29.2 62 0.0021 28.0 4.9 33 85-126 14-46 (260)
500 1geg_A Acetoin reductase; SDR 29.2 63 0.0021 28.1 4.9 33 85-126 3-35 (256)
No 1
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=3.4e-46 Score=368.68 Aligned_cols=366 Identities=17% Similarity=0.210 Sum_probs=290.8
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK 160 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (493)
+++|||++++..||+ ..||+++++.+++++| +||+|+|++..... ...... .......+..... ...
T Consensus 2 ~~~mkIl~v~~~~~p--~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~--~~~~~~------~~~~~~~~~~~~~-~~~ 68 (394)
T 3okp_A 2 SASRKTLVVTNDFPP--RIGGIQSYLRDFIATQ--DPESIVVFASTQNA--EEAHAY------DKTLDYEVIRWPR-SVM 68 (394)
T ss_dssp --CCCEEEEESCCTT--SCSHHHHHHHHHHTTS--CGGGEEEEEECSSH--HHHHHH------HTTCSSEEEEESS-SSC
T ss_pred CCCceEEEEeCccCC--ccchHHHHHHHHHHHh--cCCeEEEEECCCCc--cchhhh------ccccceEEEEccc-ccc
Confidence 457999999998876 6899999999999999 69999999987654 100000 0011111222211 112
Q ss_pred cccccchHHHHHHhcCCCCcEEEeCccchhH---H--hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338 161 WRYSKGWEQFDEENQREPFDVVHSESVALPH---W--LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS 235 (493)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~---~--~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (493)
.........+.+.+++.+||+||+++..... . ...++|+++.++|+....... ..
T Consensus 69 ~~~~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~--------------------~~ 128 (394)
T 3okp_A 69 LPTPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSM--------------------LP 128 (394)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHTT--------------------SH
T ss_pred ccchhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhhh--------------------cc
Confidence 2233455677777788899999998653222 1 222456688899985431100 01
Q ss_pred HHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccC-CcccchhhhhhhCCCCCCcEEE
Q 039338 236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGV-DLSLGQSFRSRIGIPKNASLVL 314 (493)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~-~~~~~~~~r~~~~i~~~~~~~i 314 (493)
....+. +.+++.+|.++++|+..++.+.+.++ +..++.+||||+|.+.+.+ .......++++++++++. ++|
T Consensus 129 ~~~~~~-----~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i 201 (394)
T 3okp_A 129 GSRQSL-----RKIGTEVDVLTYISQYTLRRFKSAFG-SHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTT-PVI 201 (394)
T ss_dssp HHHHHH-----HHHHHHCSEEEESCHHHHHHHHHHHC-SSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTC-CEE
T ss_pred hhhHHH-----HHHHHhCCEEEEcCHHHHHHHHHhcC-CCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCc-eEE
Confidence 111111 25578999999999999999999876 4579999999999998877 555567889999998776 678
Q ss_pred EEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc----CcEEEecCCCHHHHHHHHHHcCEEEeCCC
Q 039338 315 GVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG----HQVLVMGSMSPAELRAFYNAIDIFVNPTL 390 (493)
Q Consensus 315 ~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~----~~V~~~g~~~~~~~~~~~~~adv~v~ps~ 390 (493)
+++|++.+.||++.+++|+..+.+++++++|+|+|+|+..+.++++. ++|.|+|+++++++.++|+.||++|+||.
T Consensus 202 ~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~ 281 (394)
T 3okp_A 202 ACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPAR 281 (394)
T ss_dssp EEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCC
T ss_pred EEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCc
Confidence 89999999999999999999999999999999999999888777653 89999999999999999999999999995
Q ss_pred CC------CCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338 391 RP------QGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQY 463 (493)
Q Consensus 391 ~~------eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~ 463 (493)
.. ||+|++++|||++|+|||+++.++.. |++.++ +|+++++ |+++++++|.+++++ ++.++++++++++.
T Consensus 282 ~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~ 358 (394)
T 3okp_A 282 TRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAP-ETVTPA-TGLVVEGSDVDKLSELLIELLDD-PIRRAAMGAAGRAH 358 (394)
T ss_dssp CBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGG-GGCCTT-TEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHHHHHHH
T ss_pred cccccccccccCcHHHHHHHcCCCEEEeCCCChH-HHHhcC-CceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 32 99999999999999999999999998 888888 9999999 999999999999998 99999999999999
Q ss_pred HHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338 464 AASMFTANKMALAYERLFLCIKNETF 489 (493)
Q Consensus 464 ~~~~fs~~~~~~~~~~~~~~i~~~~~ 489 (493)
++++|+|+.+++++.++|+++..++.
T Consensus 359 ~~~~~s~~~~~~~~~~~~~~~~r~~~ 384 (394)
T 3okp_A 359 VEAEWSWEIMGERLTNILQSEPRKLA 384 (394)
T ss_dssp HHHHTBHHHHHHHHHHHHHSCCC---
T ss_pred HHHhCCHHHHHHHHHHHHHHhccCcc
Confidence 99999999999999999999876654
No 2
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=7.4e-47 Score=378.89 Aligned_cols=389 Identities=18% Similarity=0.218 Sum_probs=285.8
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccc------cCCCCC--CCCCCceEe
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQ------ENDDGS--NNKYPLLHF 153 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~ 153 (493)
++|||++++..|+| ...||+++++..|+++|+++||+|+|+++............. ...... ...+..+..
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~ 79 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYR 79 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEE
Confidence 57999999998876 588999999999999999999999999977655111100000 000000 111222222
Q ss_pred ecCC----CCccc------------cccchHHHHHHh--cCCCCcEEEeCccchh---HHh--hhccCcEEEEeccchhh
Q 039338 154 HEGE----ADKWR------------YSKGWEQFDEEN--QREPFDVVHSESVALP---HWL--ARNVTNLAVSWHGIALE 210 (493)
Q Consensus 154 ~~~~----~~~~~------------~~~~~~~~~~~~--~~~~~DiI~~~~~~~~---~~~--~~~~p~~v~~~h~~~~~ 210 (493)
.... ...+. +......+.+.+ ++.+||+||+|+.... .++ ..++| +++++|+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~ 158 (439)
T 3fro_A 80 IGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-AVFTIHRLNKS 158 (439)
T ss_dssp EESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCC-EEEEESCCCCC
T ss_pred ecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCC-EEEEecccccc
Confidence 2210 00000 001111112222 2679999999975321 222 23557 99999998643
Q ss_pred hhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCc
Q 039338 211 SLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEY 290 (493)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~ 290 (493)
............ .... .......+...++.+|.++++|+..++.....++.+..++.+||||+|.+.|
T Consensus 159 ~~~~~~~~~~~~-----------~~~~-~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~ 226 (439)
T 3fro_A 159 KLPAFYFHEAGL-----------SELA-PYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFW 226 (439)
T ss_dssp CEEHHHHHHTTC-----------GGGC-CSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTS
T ss_pred cCchHHhCcccc-----------cccc-ccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhc
Confidence 322221110000 0000 0000012335677899999999999998766666788999999999999988
Q ss_pred cCCc------ccchhhhhhhCCCCCCcEEEEEecccc-cccChHHHHHHHHHHHhhC--CCeEEEEEeCCCcH--HHHhh
Q 039338 291 GVDL------SLGQSFRSRIGIPKNASLVLGVAGRLV-KDKGHPLLHEAFSKLMVKY--PDVYLIVAGSGPWE--QRYKD 359 (493)
Q Consensus 291 ~~~~------~~~~~~r~~~~i~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~~--~~~~l~i~G~g~~~--~~~~~ 359 (493)
.+.. ..+..+++++|++++ ++|+|+|++. +.||++.+++|++.+.+++ ++++|+++|+|+.. +.+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~ 304 (439)
T 3fro_A 227 NESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARS 304 (439)
T ss_dssp CGGGSCSCHHHHHHHHHHHHTCCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHH
T ss_pred CcccccchhhhhHHHHHHHcCCCCC--cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHH
Confidence 7652 245678899999766 7888999999 9999999999999999877 89999999998865 55544
Q ss_pred h----cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-C
Q 039338 360 F----GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-N 434 (493)
Q Consensus 360 l----~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d 434 (493)
+ ++.+.|.|+++++++.++|++||++|+||.. ||+|++++|||+||+|||+++.++.. |++.++ +|+++++ |
T Consensus 305 ~~~~~~~~~~~~g~~~~~~~~~~~~~adv~v~ps~~-e~~~~~~~EAma~G~Pvi~s~~~~~~-e~~~~~-~g~~~~~~d 381 (439)
T 3fro_A 305 LEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DIITNE-TGILVKAGD 381 (439)
T ss_dssp HHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECBSC-CSSCHHHHHHHHTTCEEEEESSTHHH-HHCCTT-TCEEECTTC
T ss_pred HHhhcCCEEEEcCCCCHHHHHHHHHHCCEEEeCCCC-CCccHHHHHHHHCCCCeEEcCCCCcc-eeEEcC-ceEEeCCCC
Confidence 3 4678899999999999999999999999965 99999999999999999999999998 887776 9999999 9
Q ss_pred HHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcccCC
Q 039338 435 VESLHKTLEAAVS-EGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETFCD 491 (493)
Q Consensus 435 ~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~~~ 491 (493)
+++++++|.++++ + ++.++++++++++.+ ++|||+.+++++.++|++++++....
T Consensus 382 ~~~la~~i~~ll~~~-~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
T 3fro_A 382 PGELANAILKALELS-RSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRAFDF 437 (439)
T ss_dssp HHHHHHHHHHHHHHT-TTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCBCSS
T ss_pred HHHHHHHHHHHHhcC-HHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999 6 899999999999999 55999999999999999998876543
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=2.8e-45 Score=367.49 Aligned_cols=380 Identities=19% Similarity=0.262 Sum_probs=278.4
Q ss_pred CCCceEEEEEeccCCCCC-----CCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEee
Q 039338 80 SKFTLKIAVFSRKWPIST-----TPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFH 154 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~-----~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (493)
.++.|||++++..|+|.. ..||+++++..++++|.++||+|++++..... ....... ...+ ..+...
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~-~~~~~~~------~~~~-v~v~~~ 88 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRP-SQGEIVR------VAEN-LRVINI 88 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCG-GGCSEEE------EETT-EEEEEE
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCC-CCccccc------ccCC-eEEEEe
Confidence 455699999999886521 46999999999999999999999999976543 0111000 0011 112221
Q ss_pred cCCCC----ccccccch----HHHHHH-hc-CCCCcEEEeCccc--hhHH-hh--hccCcEEEEeccchhhhhhhhhhhh
Q 039338 155 EGEAD----KWRYSKGW----EQFDEE-NQ-REPFDVVHSESVA--LPHW-LA--RNVTNLAVSWHGIALESLQSGIFQD 219 (493)
Q Consensus 155 ~~~~~----~~~~~~~~----~~~~~~-~~-~~~~DiI~~~~~~--~~~~-~~--~~~p~~v~~~h~~~~~~~~~~~~~~ 219 (493)
..... .......+ ..+.+. ++ ..+||+||+|... +..+ +. .++| +++++|+........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~----- 162 (438)
T 3c48_A 89 AAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIP-LIHTAHTLAAVKNSY----- 162 (438)
T ss_dssp CCSCSSSCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCC-EEEECSSCHHHHSCC-----
T ss_pred cCCCccccchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCC-EEEEecCCccccccc-----
Confidence 11110 01111111 122222 22 2249999999642 1111 22 3567 999999975422100
Q ss_pred hhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcc-cch
Q 039338 220 LTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLS-LGQ 298 (493)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~-~~~ 298 (493)
.. ... .... ..+...+...++.+|.++++|+..++.+.+.+|++..++.+||||+|.+.+.+... ...
T Consensus 163 ~~-~~~---------~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~ 231 (438)
T 3c48_A 163 RD-DSD---------TPES-EARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATE 231 (438)
T ss_dssp -----C---------CHHH-HHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CH
T ss_pred cc-ccC---------Ccch-HHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhh
Confidence 00 000 0000 11112234667899999999999999999888988889999999999988766432 223
Q ss_pred hhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCC--CeEEEEEeC----CCcHHHHhh----h--cCcEEE
Q 039338 299 SFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYP--DVYLIVAGS----GPWEQRYKD----F--GHQVLV 366 (493)
Q Consensus 299 ~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~--~~~l~i~G~----g~~~~~~~~----l--~~~V~~ 366 (493)
..+++++++.+. ++|+++|++.+.||++.+++|+..+.++.| +++|+++|+ |+..+.+++ + .++|.|
T Consensus 232 ~~r~~~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~ 310 (438)
T 3c48_A 232 RSRRELGIPLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRF 310 (438)
T ss_dssp HHHHHTTCCSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEE
T ss_pred hhHHhcCCCCCC-cEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEE
Confidence 478899988776 788899999999999999999999998876 899999998 655544443 2 278999
Q ss_pred ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHH
Q 039338 367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAA 445 (493)
Q Consensus 367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~l 445 (493)
+|+++++++.++|+.||++|+||. .|++|++++|||+||+|||+++.++.. |++.++.+|+++++ |+++++++|.++
T Consensus 311 ~g~~~~~~~~~~~~~adv~v~ps~-~e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~d~~~la~~i~~l 388 (438)
T 3c48_A 311 LDPRPPSELVAVYRAADIVAVPSF-NESFGLVAMEAQASGTPVIAARVGGLP-IAVAEGETGLLVDGHSPHAWADALATL 388 (438)
T ss_dssp ECCCCHHHHHHHHHHCSEEEECCS-CCSSCHHHHHHHHTTCCEEEESCTTHH-HHSCBTTTEEEESSCCHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHhCCEEEECcc-ccCCchHHHHHHHcCCCEEecCCCChh-HHhhCCCcEEECCCCCHHHHHHHHHHH
Confidence 999999999999999999999996 599999999999999999999999998 89999999999998 999999999999
Q ss_pred HHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338 446 VSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF 489 (493)
Q Consensus 446 l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~ 489 (493)
+++ ++.++++++++++.+++ |+|+.+++++.++|+++++++.
T Consensus 389 ~~~-~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 389 LDD-DETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp HHC-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCC
T ss_pred HcC-HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhcc
Confidence 998 99999999999999999 9999999999999999988753
No 4
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=1.2e-44 Score=368.80 Aligned_cols=393 Identities=15% Similarity=0.116 Sum_probs=282.8
Q ss_pred CceEEEEEeccCCCC---------CCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCC-CCCCCce
Q 039338 82 FTLKIAVFSRKWPIS---------TTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGS-NNKYPLL 151 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~---------~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 151 (493)
++|||++++..|+|. ...||+++++.+++++|+++||+|+|++..... ............. ......+
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~--~~~~~~~~~~~~~~~~~gv~v 83 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKD--ENWPEFSGEIDYYQETNKVRI 83 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCB--TTBGGGCCSEEECTTCSSEEE
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCc--ccccchhhhHHhccCCCCeEE
Confidence 359999999977552 257999999999999999999999999976543 1100000000000 0111222
Q ss_pred EeecCCCCc----ccccc----chHHHHHHhcC--CCCcEEEeCccch--hHH-h--hhccCcEEEEeccchhhhhhhhh
Q 039338 152 HFHEGEADK----WRYSK----GWEQFDEENQR--EPFDVVHSESVAL--PHW-L--ARNVTNLAVSWHGIALESLQSGI 216 (493)
Q Consensus 152 ~~~~~~~~~----~~~~~----~~~~~~~~~~~--~~~DiI~~~~~~~--~~~-~--~~~~p~~v~~~h~~~~~~~~~~~ 216 (493)
......... ..... ....+.+.+++ .+||+||+|+... ... + ..++| ++++.|+........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p-~v~~~H~~~~~~~~~-- 160 (499)
T 2r60_A 84 VRIPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLP-FTFTGHSLGAQKMEK-- 160 (499)
T ss_dssp EEECCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCC-EEEECSSCHHHHHHT--
T ss_pred EEecCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCc-EEEEccCcccccchh--
Confidence 222211110 01111 11234445544 5899999997521 111 2 23567 999999975432211
Q ss_pred hhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH--hC-C----CCCcEEEecCCccCCC
Q 039338 217 FQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV--YQ-I----PSERVHVILNGINENE 289 (493)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~--~~-~----~~~~v~vi~ngvd~~~ 289 (493)
... .. .....+. .......+...++..++.+|.++++|+..++.+.+. +| + +..++.+||||+|.+.
T Consensus 161 ---~~~-~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~ 234 (499)
T 2r60_A 161 ---LNV-NT-SNFKEMD-ERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRV 234 (499)
T ss_dssp ---TCC-CS-TTSHHHH-HHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTT
T ss_pred ---hcc-CC-CCcchhh-hhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhh
Confidence 000 00 0000010 111111122223467889999999999999999887 77 6 7789999999999988
Q ss_pred ccCCcc--cchhhhhhhC-----CCCCCcEEEEEecccccccChHHHHHHHHHHHhhCC-CeEEEEEeC--CC------c
Q 039338 290 YGVDLS--LGQSFRSRIG-----IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYP-DVYLIVAGS--GP------W 353 (493)
Q Consensus 290 ~~~~~~--~~~~~r~~~~-----i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~-~~~l~i~G~--g~------~ 353 (493)
|.+... .+..+++++| ++.+. ++|+++||+.+.||++.+++|+..+.++.+ .++++|+|+ |+ .
T Consensus 235 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l 313 (499)
T 2r60_A 235 FDGEYGDKIKAKITKYLERDLGSERMEL-PAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRA 313 (499)
T ss_dssp SSSCCCHHHHHHHHHHHHHHSCGGGTTS-CEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTS
T ss_pred cCccchhhhHHHHHHHhcccccccCCCC-cEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccc
Confidence 876532 2356778887 76666 678899999999999999999999987644 468999998 33 1
Q ss_pred -------HHHHhh----h--cCcEEEecCCCHHHHHHHHHHc----CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC
Q 039338 354 -------EQRYKD----F--GHQVLVMGSMSPAELRAFYNAI----DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS 416 (493)
Q Consensus 354 -------~~~~~~----l--~~~V~~~g~~~~~~~~~~~~~a----dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~ 416 (493)
.+.+++ + .++|.|+|+++++++.++|++| |++|+||.. ||+|++++|||+||+|||+++.++
T Consensus 314 ~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~-Eg~~~~~lEAma~G~PvI~s~~~g 392 (499)
T 2r60_A 314 GQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFY-EPFGLAPVEAMASGLPAVVTRNGG 392 (499)
T ss_dssp CHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSC-BCCCSHHHHHHHTTCCEEEESSBH
T ss_pred cccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECccc-CCCCcHHHHHHHcCCCEEEecCCC
Confidence 333333 2 3789999999999999999999 999999965 999999999999999999999999
Q ss_pred CccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338 417 IKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF 489 (493)
Q Consensus 417 ~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~ 489 (493)
.. |++.++.+|+++++ |+++++++|.+++++ ++.++++++++++.+.+.|||+.+++++.++|+++++++.
T Consensus 393 ~~-e~v~~~~~g~l~~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~ 464 (499)
T 2r60_A 393 PA-EILDGGKYGVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKD 464 (499)
T ss_dssp HH-HHTGGGTSSEEECTTCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC--
T ss_pred HH-HHhcCCceEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence 88 89999999999998 999999999999998 9999999999999999999999999999999999987653
No 5
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=7.8e-43 Score=344.74 Aligned_cols=357 Identities=20% Similarity=0.276 Sum_probs=268.5
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC---
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA--- 158 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 158 (493)
..||.-+....|| ..||+++++..|+++|+++||+|++++..... ... .. ...+.+.....
T Consensus 12 ~~~~~~~~~~~~p---~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~--~~~-~~----------~~~i~~~~~~~~~~ 75 (394)
T 2jjm_A 12 HHMKLKIGITCYP---SVGGSGVVGTELGKQLAERGHEIHFITSGLPF--RLN-KV----------YPNIYFHEVTVNQY 75 (394)
T ss_dssp ---CCEEEEECCC-----CHHHHHHHHHHHHHHHTTCEEEEECSSCC-------CC----------CTTEEEECCCCC--
T ss_pred hhheeeeehhcCC---CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCC--ccc-cc----------CCceEEEecccccc
Confidence 3576667777776 57999999999999999999999999986433 100 00 01111111000
Q ss_pred ----CccccccchHHHHHHhcCCCCcEEEeCccc---hhHHhhh-----ccCcEEEEeccchhhhhhhhhhhhhhcCCCC
Q 039338 159 ----DKWRYSKGWEQFDEENQREPFDVVHSESVA---LPHWLAR-----NVTNLAVSWHGIALESLQSGIFQDLTRKPLE 226 (493)
Q Consensus 159 ----~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~~~~~-----~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~ 226 (493)
...........+.+.+++.+||+||+|+.. +..++.+ ++| ++.++|+....... .
T Consensus 76 ~~~~~~~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~---------~--- 142 (394)
T 2jjm_A 76 SVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIK-IVTTLHGTDITVLG---------S--- 142 (394)
T ss_dssp --CCSCCHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSE-EEEECCHHHHHTTT---------T---
T ss_pred cccccccccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCC-EEEEEecCcccccC---------C---
Confidence 001111233455666667899999998642 2222222 356 99999985431100 0
Q ss_pred ccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCC
Q 039338 227 PMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGI 306 (493)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i 306 (493)
......+ +...++.+|.++++|+..++.+.+.++. ..++.+||||+|.+.+.+.. ...+++++++
T Consensus 143 -------~~~~~~~-----~~~~~~~ad~ii~~s~~~~~~~~~~~~~-~~~~~vi~ngv~~~~~~~~~--~~~~~~~~~~ 207 (394)
T 2jjm_A 143 -------DPSLNNL-----IRFGIEQSDVVTAVSHSLINETHELVKP-NKDIQTVYNFIDERVYFKRD--MTQLKKEYGI 207 (394)
T ss_dssp -------CTTTHHH-----HHHHHHHSSEEEESCHHHHHHHHHHTCC-SSCEEECCCCCCTTTCCCCC--CHHHHHHTTC
T ss_pred -------CHHHHHH-----HHHHHhhCCEEEECCHHHHHHHHHhhCC-cccEEEecCCccHHhcCCcc--hHHHHHHcCC
Confidence 0011111 1245678999999999999999987654 57999999999998876542 3567888888
Q ss_pred CCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHH
Q 039338 307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYN 380 (493)
Q Consensus 307 ~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~ 380 (493)
+++. ++|+++|++.+.||++.+++|+..+.++ ++++|+++|+|+..+.++++ .++|.|+|+. +++.++|+
T Consensus 208 ~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~ 283 (394)
T 2jjm_A 208 SESE-KILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ--DNVAELLA 283 (394)
T ss_dssp C----CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSC--SCTHHHHH
T ss_pred CCCC-eEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCch--hhHHHHHH
Confidence 7665 6788999999999999999999999877 57999999999876665543 2789999974 79999999
Q ss_pred HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHH
Q 039338 381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEA 459 (493)
Q Consensus 381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~ 459 (493)
.||++|+||. .||+|++++|||++|+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+++++++
T Consensus 284 ~adv~v~ps~-~e~~~~~~~EAma~G~PvI~~~~~~~~-e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~ 360 (394)
T 2jjm_A 284 MSDLMLLLSE-KESFGLVLLEAMACGVPCIGTRVGGIP-EVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGER 360 (394)
T ss_dssp TCSEEEECCS-CCSCCHHHHHHHHTTCCEEEECCTTST-TTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred hCCEEEeccc-cCCCchHHHHHHhcCCCEEEecCCChH-HHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 9999999996 599999999999999999999999998 89999999999999 999999999999998 9999999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338 460 CRQYAASMFTANKMALAYERLFLCIKNETF 489 (493)
Q Consensus 460 ~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~ 489 (493)
+++.+.+.|+|+.+++++.++|+++++++.
T Consensus 361 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 390 (394)
T 2jjm_A 361 ARESVYEQFRSEKIVSQYETIYYDVLRDDK 390 (394)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence 999998889999999999999999987643
No 6
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=6.8e-43 Score=346.51 Aligned_cols=360 Identities=18% Similarity=0.301 Sum_probs=271.8
Q ss_pred CCCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-
Q 039338 79 PSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE- 157 (493)
Q Consensus 79 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 157 (493)
...++|||++++..+|+ ..||+++++..++++|+++||+|++++............. .....+.+....
T Consensus 16 ~~~~~MkIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 85 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV--------SGGKAVPIPYNGS 85 (406)
T ss_dssp -----CEEEEECSSCTT--SCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE--------ECCCCC-------
T ss_pred cCCCcceEEEEeccCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc--------cCCcEEeccccCC
Confidence 34567999999987653 6799999999999999999999999998765510111100 000111110000
Q ss_pred CCcccc-ccchHHHHHHhcCCCCcEEEeCccchh---HHhh--hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchH
Q 039338 158 ADKWRY-SKGWEQFDEENQREPFDVVHSESVALP---HWLA--RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLA 231 (493)
Q Consensus 158 ~~~~~~-~~~~~~~~~~~~~~~~DiI~~~~~~~~---~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (493)
...+.+ ......+.+.+++.+||+||+++.... ..+. .+.| +++++|+.....
T Consensus 86 ~~~~~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~-------------------- 144 (406)
T 2gek_A 86 VARLRFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGP-IVATFHTSTTKS-------------------- 144 (406)
T ss_dssp -----CCHHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESS-EEEEECCCCCSH--------------------
T ss_pred cccccccHHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCC-EEEEEcCcchhh--------------------
Confidence 000111 112355666666779999999875321 1222 2556 999999853221
Q ss_pred hHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCc
Q 039338 232 FNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNAS 311 (493)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~ 311 (493)
.....+.+.+. ..++.+|.++++|+..++.+.+.++ ..++ +||||+|.+.+.+.... .+++.++
T Consensus 145 ---~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~~~~--~~~~-vi~~~v~~~~~~~~~~~-------~~~~~~~- 208 (406)
T 2gek_A 145 ---LTLSVFQGILR--PYHEKIIGRIAVSDLARRWQMEALG--SDAV-EIPNGVDVASFADAPLL-------DGYPREG- 208 (406)
T ss_dssp ---HHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHHHHHS--SCEE-ECCCCBCHHHHHTCCCC-------TTCSCSS-
T ss_pred ---hhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHHHhcC--CCcE-EecCCCChhhcCCCchh-------hhccCCC-
Confidence 11112222222 5678999999999999999988765 4578 99999998776554321 1223333
Q ss_pred EEEEEeccc-ccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh----cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338 312 LVLGVAGRL-VKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF----GHQVLVMGSMSPAELRAFYNAIDIFV 386 (493)
Q Consensus 312 ~~i~~~Gr~-~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l----~~~V~~~g~~~~~~~~~~~~~adv~v 386 (493)
.+|+|+|++ .+.||++.+++++..+.+++++++|+++|+|+. +.++++ .++|.|+|+++++++.++|+.||++|
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v 287 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYC 287 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEE
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEE
Confidence 688899999 999999999999999999889999999999887 555554 47899999999999999999999999
Q ss_pred eCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Q 039338 387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAA 465 (493)
Q Consensus 387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 465 (493)
+||.+.||+|++++|||++|+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+.++++++++.++
T Consensus 288 ~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~ 365 (406)
T 2gek_A 288 APHLGGESFGIVLVEAMAAGTAVVASDLDAFR-RVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVH 365 (406)
T ss_dssp ECCCSCCSSCHHHHHHHHHTCEEEECCCHHHH-HHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHGG
T ss_pred ecCCCCCCCchHHHHHHHcCCCEEEecCCcHH-HHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHH
Confidence 99864699999999999999999999999988 88998999999998 999999999999998 8999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHhhccc
Q 039338 466 SMFTANKMALAYERLFLCIKNETF 489 (493)
Q Consensus 466 ~~fs~~~~~~~~~~~~~~i~~~~~ 489 (493)
.|+|+.+++++.++|+++++++.
T Consensus 366 -~~s~~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 366 -RYDWSVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp -GGBHHHHHHHHHHHHHHHCCTTC
T ss_pred -hCCHHHHHHHHHHHHHHHHhhcc
Confidence 79999999999999999987653
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=6.6e-44 Score=362.22 Aligned_cols=391 Identities=17% Similarity=0.194 Sum_probs=271.3
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCC--CCccccC--------CCCC--CCCCCce
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSP--SISHQEN--------DDGS--NNKYPLL 151 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--~~~~~~~--------~~~~--~~~~~~~ 151 (493)
|||++++..|+|....||+++++.+|+++|+++||+|+|++......... ....... .... ...+..+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence 89999999887644579999999999999999999999999754320000 0000000 0000 0011122
Q ss_pred EeecC-----CCC-ccc-------------cccchHHHHHHh----cCCCCcEEEeCccc---hhHHhh----hccCcEE
Q 039338 152 HFHEG-----EAD-KWR-------------YSKGWEQFDEEN----QREPFDVVHSESVA---LPHWLA----RNVTNLA 201 (493)
Q Consensus 152 ~~~~~-----~~~-~~~-------------~~~~~~~~~~~~----~~~~~DiI~~~~~~---~~~~~~----~~~p~~v 201 (493)
+.... ... .+. +......+.+.+ ++.+|||||+|+.. ++.++. .++| ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~p-~v 159 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIP-SL 159 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCC-EE
T ss_pred EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcccCCCC-EE
Confidence 22111 000 010 000111122222 47799999999742 222232 3557 99
Q ss_pred EEeccchhhhhhh-hhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH-hC-------
Q 039338 202 VSWHGIALESLQS-GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV-YQ------- 272 (493)
Q Consensus 202 ~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~~------- 272 (493)
+++|+.+...... ...... ..+.......... ... ....++..++.+|.++++|+..++.+.+. +|
T Consensus 160 ~t~H~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~---~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~ 234 (485)
T 1rzu_A 160 LTIHNIAFQGQFGANIFSKL-ALPAHAFGMEGIE-YYN---DVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVI 234 (485)
T ss_dssp EEESCTTCCCEECGGGGGGS-CCCGGGSSTTTTE-ETT---EEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHH
T ss_pred EEecCccccCCCCHHHHhhc-CCChhhccccccc-ccc---cccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHH
Confidence 9999975421111 000000 0000000000000 000 00112355678999999999999998764 44
Q ss_pred -CCCCcEEEecCCccCCCccCCccc-----------------chhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHH
Q 039338 273 -IPSERVHVILNGINENEYGVDLSL-----------------GQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFS 334 (493)
Q Consensus 273 -~~~~~v~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~ 334 (493)
++..++.+||||+|.+.|.+.... +..+++++|++.++..+|+++||+.+.||++.+++|+.
T Consensus 235 ~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~ 314 (485)
T 1rzu_A 235 GSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVD 314 (485)
T ss_dssp HTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHH
T ss_pred HhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHH
Confidence 467899999999999888765432 46788999998863368899999999999999999999
Q ss_pred HHHhhCCCeEEEEEeCCCc--HHHHhh----hcCcEE-EecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCC
Q 039338 335 KLMVKYPDVYLIVAGSGPW--EQRYKD----FGHQVL-VMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK 407 (493)
Q Consensus 335 ~l~~~~~~~~l~i~G~g~~--~~~~~~----l~~~V~-~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~ 407 (493)
.+.+ ++++|+|+|+|+. .+.+++ ++++|. +.|+ +++++.++|++||++|+||.. ||||++++|||+||+
T Consensus 315 ~l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~-E~~~~~~lEAma~G~ 390 (485)
T 1rzu_A 315 EIVS--LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAGCDAIIIPSRF-EPCGLTQLYALRYGC 390 (485)
T ss_dssp HHHH--TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHHCSEEEECCSC-CSSCSHHHHHHHHTC
T ss_pred HHHh--cCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhcCCEEEECccc-CCCCHHHHHHHHCCC
Confidence 9976 4899999999863 444444 347887 7888 778889999999999999974 999999999999999
Q ss_pred cEEecCCCCCccceeeeC---------cceEEECC-CHHHHHHHHHHHH---HcCcHHHHHHHHHHHHHHHHhcCHHHHH
Q 039338 408 PVMASRFPSIKGTIVVDD---------EFGFMFAP-NVESLHKTLEAAV---SEGPMRLAQRGEACRQYAASMFTANKMA 474 (493)
Q Consensus 408 PvI~s~~~~~~~e~v~~~---------~~G~~~~~-d~~~l~~~i~~ll---~~~~~~~~~~~~~~~~~~~~~fs~~~~~ 474 (493)
|||+++.||.+ |++.++ .+|+++++ |+++|+++|.+++ +| ++.++++++++++ +.|||+.++
T Consensus 391 PvI~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~---~~fs~~~~~ 465 (485)
T 1rzu_A 391 IPVVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD-PKLWTQMQKLGMK---SDVSWEKSA 465 (485)
T ss_dssp EEEEESSHHHH-HHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHT---CCCBHHHHH
T ss_pred CEEEeCCCChh-heecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHH---HhCChHHHH
Confidence 99999999998 888888 89999999 9999999999999 67 8899999999874 679999999
Q ss_pred HHHHHHHHHHhhccc
Q 039338 475 LAYERLFLCIKNETF 489 (493)
Q Consensus 475 ~~~~~~~~~i~~~~~ 489 (493)
++|.++|++++++..
T Consensus 466 ~~~~~~y~~~~~~~~ 480 (485)
T 1rzu_A 466 GLYAALYSQLISKGH 480 (485)
T ss_dssp HHHHHHHHHHTC---
T ss_pred HHHHHHHHHhhCCCC
Confidence 999999999988754
No 8
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=1.2e-42 Score=345.52 Aligned_cols=345 Identities=14% Similarity=0.164 Sum_probs=265.0
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCC--ceEeecCCCCcc
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYP--LLHFHEGEADKW 161 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 161 (493)
|||+++++.+| ..||+++++..|+++|+++ |+|++++..... ...... .. ............
T Consensus 1 MkI~~v~~~~p---~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g--~~~~~~----------~~~~~~~~~~~~~~~~ 64 (413)
T 3oy2_A 1 MKLIIVGAHSS---VPSGYGRVMRAIVPRISKA-HEVIVFGIHAFG--RSVHAN----------IEEFDAQTAEHVRGLN 64 (413)
T ss_dssp CEEEEEEECTT---CCSHHHHHHHHHHHHHTTT-SEEEEEEESCCS--CCSCSS----------SEEEEHHHHHHHTTCC
T ss_pred CeEEEecCCCC---CCCCHHHHHHHHHHHHHhc-CCeEEEeecCCC--cccccc----------cccCCccccccccccc
Confidence 89999998764 5699999999999999999 999999876543 111000 00 000000000000
Q ss_pred ccccchHHHHHHhcCCCCcEEEeCccch-h-HHh--hhccC---cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHh
Q 039338 162 RYSKGWEQFDEENQREPFDVVHSESVAL-P-HWL--ARNVT---NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNK 234 (493)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~DiI~~~~~~~-~-~~~--~~~~p---~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (493)
.....+..+.+.+++.+||+||+|.... . .+. ...+| +.+..+|....... .
T Consensus 65 ~~~~~~~~l~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~ 123 (413)
T 3oy2_A 65 EQGFYYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR---------------------E 123 (413)
T ss_dssp STTCCHHHHHHHHHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC---------------------G
T ss_pred cccchHHHHHHHHHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH---------------------H
Confidence 0112334455666677999999995421 1 111 12223 24555554321100 0
Q ss_pred HHHHHHHHHHHHHHhhccCC--eEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCC--CC
Q 039338 235 SLQGVMLKVLNEIRFFNKYA--HHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPK--NA 310 (493)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~d--~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~--~~ 310 (493)
. ...+++++| .++++|+..++.+.+ +|. ..++.+||||+|.+.+ ...++++++++ +.
T Consensus 124 ~----------~~~~~~~~~~~~ii~~S~~~~~~~~~-~~~-~~~~~vi~ngvd~~~~-------~~~~~~~~~~~~~~~ 184 (413)
T 3oy2_A 124 N----------LWWIFSHPKVVGVMAMSKCWISDICN-YGC-KVPINIVSHFVDTKTI-------YDARKLVGLSEYNDD 184 (413)
T ss_dssp G----------GGGGGGCTTEEEEEESSTHHHHHHHH-TTC-CSCEEECCCCCCCCCC-------TTHHHHTTCGGGTTS
T ss_pred H----------HHHHHhccCCceEEEcCHHHHHHHHH-cCC-CCceEEeCCCCCHHHH-------HHHHHhcCCCcccCc
Confidence 0 125678888 999999999999998 776 6899999999999877 34567788876 54
Q ss_pred cEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH------HHHhh----hc--Cc-------EEEecCCC
Q 039338 311 SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE------QRYKD----FG--HQ-------VLVMGSMS 371 (493)
Q Consensus 311 ~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~------~~~~~----l~--~~-------V~~~g~~~ 371 (493)
++|+++||+.+.||++.+++|+..+.+++++++|+|+|+|+.. +.+++ ++ ++ |.+.|+++
T Consensus 185 -~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~ 263 (413)
T 3oy2_A 185 -VLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLT 263 (413)
T ss_dssp -EEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCC
T ss_pred -eEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCC
Confidence 8899999999999999999999999999999999999998753 55554 22 54 88899999
Q ss_pred HHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcc---------------eE--EECC-
Q 039338 372 PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEF---------------GF--MFAP- 433 (493)
Q Consensus 372 ~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~---------------G~--~~~~- 433 (493)
++++.++|++||++|+||. .||||++++|||++|+|||+++.+|.+ |++.++.+ |+ ++++
T Consensus 264 ~~~~~~~~~~adv~v~pS~-~E~~~~~~lEAma~G~PvI~s~~~g~~-e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~ 341 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSS-GEGFGLCSAEGAVLGKPLIISAVGGAD-DYFSGDCVYKIKPSAWISVDDRDGIGGIEGII 341 (413)
T ss_dssp HHHHHHHHHHCSEEEECCS-CCSSCHHHHHHHTTTCCEEEECCHHHH-HHSCTTTSEEECCCEEEECTTTCSSCCEEEEC
T ss_pred HHHHHHHHHhCCEEEeCCC-cCCCCcHHHHHHHcCCCEEEcCCCChH-HHHccCcccccccccccccccccCcceeeCCC
Confidence 9999999999999999996 599999999999999999999999988 88888877 99 9998
Q ss_pred CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338 434 NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF 489 (493)
Q Consensus 434 d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~ 489 (493)
|+++++++| +++++ ++.++++++++++++++.|||+.++++++++|+++++++.
T Consensus 342 d~~~la~~i-~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 395 (413)
T 3oy2_A 342 DVDDLVEAF-TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVES 395 (413)
T ss_dssp CHHHHHHHH-HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC---
T ss_pred CHHHHHHHH-HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Confidence 999999999 99998 9999999999999998889999999999999999988754
No 9
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=1.5e-42 Score=352.14 Aligned_cols=390 Identities=17% Similarity=0.186 Sum_probs=268.5
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCc--cc---c----CCCCC--CCCCCceE
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSIS--HQ---E----NDDGS--NNKYPLLH 152 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~--~~---~----~~~~~--~~~~~~~~ 152 (493)
|||++++..|+|....||+++++.+|+++|+++||+|+|++............ .. . ..... ......++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence 89999999886644689999999999999999999999999754320000000 00 0 00000 00111222
Q ss_pred eecC-----CCC-ccc-------------cccchHHHHHHhc----CCCCcEEEeCccc---hhHHhh---hccCcEEEE
Q 039338 153 FHEG-----EAD-KWR-------------YSKGWEQFDEENQ----REPFDVVHSESVA---LPHWLA---RNVTNLAVS 203 (493)
Q Consensus 153 ~~~~-----~~~-~~~-------------~~~~~~~~~~~~~----~~~~DiI~~~~~~---~~~~~~---~~~p~~v~~ 203 (493)
.... ... .+. +......+.+.++ +.+|||||+|+.. ++.++. .++| ++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~~~p-~v~t 159 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAK-SVFT 159 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTTCSSE-EEEE
T ss_pred EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhccCCCC-EEEE
Confidence 2111 000 010 0001223334443 3799999999752 222222 3456 9999
Q ss_pred eccchhhhhhh-hhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH-hCCC-------
Q 039338 204 WHGIALESLQS-GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV-YQIP------- 274 (493)
Q Consensus 204 ~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~~~~------- 274 (493)
+|+.+...... ...... ..+......... ... .....++..++.+|.++++|+..++.+.+. +|..
T Consensus 160 ~H~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~---~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~ 234 (485)
T 2qzs_A 160 VHNLAYQGMFYAHHMNDI-QLPWSFFNIHGL-EFN---GQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQ 234 (485)
T ss_dssp ESCTTCCCEEEGGGGGTT-TCCGGGCSTTTT-EET---TEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHH
T ss_pred ecCccccCCCCHHHHHhc-CCCchhcccccc-ccc---ccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHh
Confidence 99975321110 000000 000000000000 000 000112245678999999999999998764 4532
Q ss_pred -C--CcEEEecCCccCCCccCCcc-----------------cchhhhhhhCCCCC-CcEEEEEecccccccChHHHHHHH
Q 039338 275 -S--ERVHVILNGINENEYGVDLS-----------------LGQSFRSRIGIPKN-ASLVLGVAGRLVKDKGHPLLHEAF 333 (493)
Q Consensus 275 -~--~~v~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~ll~a~ 333 (493)
. .++.+||||+|.+.|.+... .+..+++++|++.+ +.++|+++||+.+.||++.+++|+
T Consensus 235 ~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~ 314 (485)
T 2qzs_A 235 RHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEAL 314 (485)
T ss_dssp HHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHH
T ss_pred hccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHH
Confidence 2 78999999999988876543 24678889999862 337888999999999999999999
Q ss_pred HHHHhhCCCeEEEEEeCCC--cHHHHhh----hcCcEE-EecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcC
Q 039338 334 SKLMVKYPDVYLIVAGSGP--WEQRYKD----FGHQVL-VMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSG 406 (493)
Q Consensus 334 ~~l~~~~~~~~l~i~G~g~--~~~~~~~----l~~~V~-~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G 406 (493)
+.+.+ ++++|+|+|+|+ ..+.+++ ++++|. +.|+ +++++.++|++||++|+||. .||+|++++|||+||
T Consensus 315 ~~l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~-~E~~g~~~lEAma~G 390 (485)
T 2qzs_A 315 PGLLE--QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIMGGADVILVPSR-FEPCGLTQLYGLKYG 390 (485)
T ss_dssp HHHHH--TTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHHHHCSEEEECCS-CCSSCSHHHHHHHHT
T ss_pred HHHhh--CCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHHHhCCEEEECCc-cCCCcHHHHHHHHCC
Confidence 99976 489999999986 3444444 346886 7888 77888999999999999996 499999999999999
Q ss_pred CcEEecCCCCCccceeeeC---------cceEEECC-CHHHHHHHHHHHH---HcCcHHHHHHHHHHHHHHHHhcCHHHH
Q 039338 407 KPVMASRFPSIKGTIVVDD---------EFGFMFAP-NVESLHKTLEAAV---SEGPMRLAQRGEACRQYAASMFTANKM 473 (493)
Q Consensus 407 ~PvI~s~~~~~~~e~v~~~---------~~G~~~~~-d~~~l~~~i~~ll---~~~~~~~~~~~~~~~~~~~~~fs~~~~ 473 (493)
+|||+++.||.+ |++.++ .+|+++++ |+++|+++|.+++ +| ++.++++++++++ +.|||+.+
T Consensus 391 ~PvI~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~---~~fs~~~~ 465 (485)
T 2qzs_A 391 TLPLVRRTGGLA-DTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSR-PSLWRFVQRQAMA---MDFSWQVA 465 (485)
T ss_dssp CEEEEESSHHHH-HHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTS-HHHHHHHHHHHHH---CCCCHHHH
T ss_pred CCEEECCCCCcc-ceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHh---hcCCHHHH
Confidence 999999999998 888888 89999999 9999999999999 56 8899999998874 67999999
Q ss_pred HHHHHHHHHHHhhcc
Q 039338 474 ALAYERLFLCIKNET 488 (493)
Q Consensus 474 ~~~~~~~~~~i~~~~ 488 (493)
+++|.++|++++.+.
T Consensus 466 ~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 466 AKSYRELYYRLKLEH 480 (485)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhhhhh
Confidence 999999999987654
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=1e-42 Score=346.45 Aligned_cols=357 Identities=17% Similarity=0.184 Sum_probs=262.5
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD 159 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (493)
.+++|||++++..+ ..||+++++.+++++|+++||+|++++..... .. ......+.........+.+ ...
T Consensus 37 ~~~~mkIl~v~~~~----~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~---~~~ 106 (416)
T 2x6q_A 37 KLKGRSFVHVNSTS----FGGGVAEILHSLVPLLRSIGIEARWFVIEGPT--EF-FNVTKTFHNALQGNESLKL---TEE 106 (416)
T ss_dssp TTTTCEEEEEESCS----SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH--HH-HHHHHHHHHHHTTCCSCCC---CHH
T ss_pred hhhccEEEEEeCCC----CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc--ch-hhhhcccceeecccccccc---cHH
Confidence 56789999999863 67999999999999999999999999875432 10 0000000000000000000 000
Q ss_pred cc-ccccchHHHHHHhcCCCCcEEEeCccch---hHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338 160 KW-RYSKGWEQFDEENQREPFDVVHSESVAL---PHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS 235 (493)
Q Consensus 160 ~~-~~~~~~~~~~~~~~~~~~DiI~~~~~~~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (493)
.+ .+......+.+.+++.+||+||+|+... ..++.+..| ++++.|+..... . ..
T Consensus 107 ~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~----------------~-----~~ 164 (416)
T 2x6q_A 107 MKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSP-WLWRCHIDLSSP----------------N-----RE 164 (416)
T ss_dssp HHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSCCCSC-EEEECCSCCSSC----------------C-----HH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHHHHHHhcCC-EEEEEccccCCc----------------c-----HH
Confidence 00 0111123344556677999999997532 222233355 999999853210 0 11
Q ss_pred HHHHHHHHHHHHHhhccCCeEE-EcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCc---ccchhhhhhhCCCCCCc
Q 039338 236 LQGVMLKVLNEIRFFNKYAHHV-AISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDL---SLGQSFRSRIGIPKNAS 311 (493)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~d~ii-~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~---~~~~~~r~~~~i~~~~~ 311 (493)
....+. +++.++|.++ ++|+...+ +++..++.+||||+|...+.+.. .....+++++++++++
T Consensus 165 ~~~~~~------~~~~~~~~~i~~~s~~~~~------~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~- 231 (416)
T 2x6q_A 165 FWEFLR------RFVEKYDRYIFHLPEYVQP------ELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEK- 231 (416)
T ss_dssp HHHHHH------HHHTTSSEEEESSGGGSCT------TSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTS-
T ss_pred HHHHHH------HHHHhCCEEEEechHHHHh------hCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCC-
Confidence 112121 3456788776 55555433 23457899999999987665322 2345678899998776
Q ss_pred EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCc-----HHHHh----hhc--CcEEEecCC---CHHHHHH
Q 039338 312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW-----EQRYK----DFG--HQVLVMGSM---SPAELRA 377 (493)
Q Consensus 312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~-----~~~~~----~l~--~~V~~~g~~---~~~~~~~ 377 (493)
++|+++||+.+.||++.+++|+..+.++.|+++|+|+|+|+. .+.++ +++ ++|.|+|++ +++++.+
T Consensus 232 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~ 311 (416)
T 2x6q_A 232 PIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNA 311 (416)
T ss_dssp CEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHH
T ss_pred cEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHH
Confidence 678899999999999999999999999889999999999864 22222 232 799999965 4789999
Q ss_pred HHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHH
Q 039338 378 FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRG 457 (493)
Q Consensus 378 ~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~ 457 (493)
+|+.||++|+||.. ||+|++++|||+||+|||+++.++.+ |++.++.+|++++ |+++++++|.++++| ++.+++++
T Consensus 312 ~~~~ad~~v~ps~~-E~~~~~~lEAma~G~PvI~~~~~g~~-e~i~~~~~g~l~~-d~~~la~~i~~ll~~-~~~~~~~~ 387 (416)
T 2x6q_A 312 FQRASDVILQMSIR-EGFGLTVTEAMWKGKPVIGRAVGGIK-FQIVDGETGFLVR-DANEAVEVVLYLLKH-PEVSKEMG 387 (416)
T ss_dssp HHHHCSEEEECCSS-CSSCHHHHHHHHTTCCEEEESCHHHH-HHCCBTTTEEEES-SHHHHHHHHHHHHHC-HHHHHHHH
T ss_pred HHHhCCEEEECCCc-CCCccHHHHHHHcCCCEEEccCCCCh-hheecCCCeEEEC-CHHHHHHHHHHHHhC-HHHHHHHH
Confidence 99999999999965 99999999999999999999999988 8999999999999 999999999999998 99999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338 458 EACRQYAASMFTANKMALAYERLFLCIK 485 (493)
Q Consensus 458 ~~~~~~~~~~fs~~~~~~~~~~~~~~i~ 485 (493)
+++++.+.+.|+|+.+++++.++|++++
T Consensus 388 ~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 388 AKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 9999999988999999999999999875
No 11
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=5.6e-42 Score=347.95 Aligned_cols=395 Identities=16% Similarity=0.208 Sum_probs=261.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCcc-ccCCC-----------CCCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISH-QENDD-----------GSNNKY 148 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~ 148 (493)
.+.|||++|+.+++|....||.+.++..|.++|+++||+|.|+++....+....... ...+. .....+
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 86 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRG 86 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETT
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECC
Confidence 458999999999877677899999999999999999999999997665422211000 00000 000011
Q ss_pred CceEeecCCCC-----------cc------ccc---cch----HHHHH---Hh----------cCCCCcEEEeCcc--c-
Q 039338 149 PLLHFHEGEAD-----------KW------RYS---KGW----EQFDE---EN----------QREPFDVVHSESV--A- 188 (493)
Q Consensus 149 ~~~~~~~~~~~-----------~~------~~~---~~~----~~~~~---~~----------~~~~~DiI~~~~~--~- 188 (493)
..++++..... .+ .+. ..+ +...+ .+ ....+||+|+|.+ +
T Consensus 87 v~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l 166 (536)
T 3vue_A 87 VDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGP 166 (536)
T ss_dssp EEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGST
T ss_pred ceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHH
Confidence 11111111000 00 000 000 11111 11 1235678889865 2
Q ss_pred hhHHhh---------hccCcEEEEeccchhhhhhhh-hhhhhhcCCCCccch-HhHhHHHHHH--HHHHHHHHhhccCCe
Q 039338 189 LPHWLA---------RNVTNLAVSWHGIALESLQSG-IFQDLTRKPLEPMSL-AFNKSLQGVM--LKVLNEIRFFNKYAH 255 (493)
Q Consensus 189 ~~~~~~---------~~~p~~v~~~h~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~d~ 255 (493)
++.++. +.+| ++.|+|+..+...... ..... ..+...... .+........ ...-.++..+..||.
T Consensus 167 ~~~~l~~~~~~~~~~~~~~-~V~TiHnl~~qg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~ 244 (536)
T 3vue_A 167 LASYLKNNYQPNGIYRNAK-VAFCIHNISYQGRFAFEDYPEL-NLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADR 244 (536)
T ss_dssp HHHHHHHHTTTTTSSTTCE-EEEEESCTTCCCEEEGGGGGGG-CCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSE
T ss_pred HHHHHHHhhhhhhhhcccc-eeeeecCcccccccchhhhhhc-CCchhhcchhhhhhcccccccccchhHHHHHHHhccE
Confidence 222222 1345 9999998654321110 00000 000000000 0000000000 000011244668999
Q ss_pred EEEcChhHHHHHHHHhC--------CCCCcEEEecCCccCCCccCCccc------------------chhhhhhhCCCCC
Q 039338 256 HVAISDSCGEMLRDVYQ--------IPSERVHVILNGINENEYGVDLSL------------------GQSFRSRIGIPKN 309 (493)
Q Consensus 256 ii~~S~~~~~~~~~~~~--------~~~~~v~vi~ngvd~~~~~~~~~~------------------~~~~r~~~~i~~~ 309 (493)
|+++|+..++.+.+.++ ....++.+|+||||.+.|.+..+. +..+++.+|++.+
T Consensus 245 v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d 324 (536)
T 3vue_A 245 VLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVD 324 (536)
T ss_dssp EEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCC
T ss_pred EEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCC
Confidence 99999999998877553 235689999999999999875321 2445667787643
Q ss_pred -CcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHH--HH----hhhcCcEEEecCCCHHHHHHHHHHc
Q 039338 310 -ASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQ--RY----KDFGHQVLVMGSMSPAELRAFYNAI 382 (493)
Q Consensus 310 -~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~--~~----~~l~~~V~~~g~~~~~~~~~~~~~a 382 (493)
+.++|+|+||+.++||++.+++|+.++.++ +.+++++|.|+... .+ ..+..+|.+.+..+.+++..+|+.|
T Consensus 325 ~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 325 RKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp TTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred CCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence 236888999999999999999999999874 66888988876432 22 2234899999999999999999999
Q ss_pred CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceE----------EECC-CHHHHHHHHHHHHH--cC
Q 039338 383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGF----------MFAP-NVESLHKTLEAAVS--EG 449 (493)
Q Consensus 383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~----------~~~~-d~~~l~~~i~~ll~--~~ 449 (493)
|++|+||.+ |+||++++|||+||+|||+++.||++ |+|.++.+|+ ++++ |+++|+++|.++++ +
T Consensus 403 D~~v~PS~~-E~fgl~~lEAma~G~PvI~s~~gG~~-e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~- 479 (536)
T 3vue_A 403 DVLAVPSRF-EPCGLIQLQGMRYGTPCACASTGGLV-DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVG- 479 (536)
T ss_dssp SEEEECCSC-CSSCSHHHHHHHTTCCEEECSCTHHH-HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTT-
T ss_pred heeeccccc-CCCCHHHHHHHHcCCCEEEcCCCCch-heeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcC-
Confidence 999999965 99999999999999999999999999 9999999998 6677 89999999999887 4
Q ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338 450 PMRLAQRGEACRQYAASMFTANKMALAYERLFLCIK 485 (493)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~ 485 (493)
.+.++++++++ ++++|||++.+++|+++|+++.
T Consensus 480 ~~~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 480 TPAYEEMVRNC---MNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp SHHHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Confidence 44556665554 5577999999999999999974
No 12
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=1.1e-41 Score=334.15 Aligned_cols=354 Identities=19% Similarity=0.224 Sum_probs=263.4
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC--cc
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD--KW 161 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 161 (493)
|||++++..+++ .||+++++.+++++|+++||+|++++..... .. . ....+........ ..
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~--~~-----------~-~~~~v~~~~~~~~~~~~ 63 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEG--DC-----------P-KAFELIQVPVKSHTNHG 63 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECS--CC-----------C-TTCEEEECCCCCSSHHH
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCC--CC-----------C-CCcEEEEEccCcccchh
Confidence 899999998753 5999999999999999999999999976433 10 0 1112222221111 11
Q ss_pred ccccchHHHHHHhcCCCCcEEEeCccchhH--Hhhhc---cCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHH
Q 039338 162 RYSKGWEQFDEENQREPFDVVHSESVALPH--WLARN---VTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL 236 (493)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~--~~~~~---~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (493)
........+.+.+++.+||+||+++..... ..... .+ .+.+.|+... ... .....
T Consensus 64 ~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~----------~~~~~ 123 (374)
T 2iw1_A 64 RNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAE-KVAQEKGFLY---------RLT----------SRYRH 123 (374)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEECCSCCHHH-HHHHHCCHHH---------HTS----------HHHHH
T ss_pred hHHHHHHHHHHHHhccCCCEEEEecCCCCceeeeccccccce-eeeecccchh---------hhc----------HHHHH
Confidence 122233456666677899999998642211 11100 01 1111122100 000 00011
Q ss_pred HHHHHHHHHHHHhh--ccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcc--cchhhhhhhCCCCCCcE
Q 039338 237 QGVMLKVLNEIRFF--NKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLS--LGQSFRSRIGIPKNASL 312 (493)
Q Consensus 237 ~~~~~~~~~~~~~~--~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~--~~~~~r~~~~i~~~~~~ 312 (493)
...+ +...+ +.+|.++++|+..++.+.+.+|++..++.++|||+|.+.+.+... .+..++++++++++. +
T Consensus 124 ~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 197 (374)
T 2iw1_A 124 YAAF-----ERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQ-N 197 (374)
T ss_dssp HHHH-----HHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTC-E
T ss_pred HHHH-----HHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCC-e
Confidence 1111 11233 379999999999999999988988889999999999988765432 245688999998776 7
Q ss_pred EEEEecccccccChHHHHHHHHHHHhh-CCCeEEEEEeCCCcHH---HHhhh--cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338 313 VLGVAGRLVKDKGHPLLHEAFSKLMVK-YPDVYLIVAGSGPWEQ---RYKDF--GHQVLVMGSMSPAELRAFYNAIDIFV 386 (493)
Q Consensus 313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~-~~~~~l~i~G~g~~~~---~~~~l--~~~V~~~g~~~~~~~~~~~~~adv~v 386 (493)
+++++|++.+.||++.+++++..+.++ .++++|+++|+|+..+ ..+++ .++|.|+|+. +++.++|+.||++|
T Consensus 198 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v 275 (374)
T 2iw1_A 198 LLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLL 275 (374)
T ss_dssp EEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEE
T ss_pred EEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCHHHHHHHHHHcCCCCcEEECCCc--ccHHHHHHhcCEEE
Confidence 888999999999999999999999776 5789999999987532 22223 3799999985 78999999999999
Q ss_pred eCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEEC-C-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Q 039338 387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFA-P-NVESLHKTLEAAVSEGPMRLAQRGEACRQYA 464 (493)
Q Consensus 387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~-~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 464 (493)
+||. .|++|++++|||++|+|||+++.++.. |++.++.+|++++ + |+++++++|.+++++ ++.++++++++++.+
T Consensus 276 ~ps~-~e~~~~~~~Ea~a~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~ 352 (374)
T 2iw1_A 276 HPAY-QEAAGIVLLEAITAGLPVLTTAVCGYA-HYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYA 352 (374)
T ss_dssp ECCS-CCSSCHHHHHHHHHTCCEEEETTSTTT-HHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
T ss_pred eccc-cCCcccHHHHHHHCCCCEEEecCCCch-hhhccCCceEEeCCCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHH
Confidence 9996 499999999999999999999999998 8899999999998 7 999999999999998 999999999999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHhh
Q 039338 465 ASMFTANKMALAYERLFLCIKN 486 (493)
Q Consensus 465 ~~~fs~~~~~~~~~~~~~~i~~ 486 (493)
++ ++|+..++++.++++..++
T Consensus 353 ~~-~~~~~~~~~~~~~l~~~l~ 373 (374)
T 2iw1_A 353 DT-QDLYSLPEKAADIITGGLD 373 (374)
T ss_dssp HH-SCCSCHHHHHHHHHHCC--
T ss_pred HH-hhHHHHHHHHHHHHHHhhc
Confidence 87 7999999999999886553
No 13
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=7.4e-41 Score=349.93 Aligned_cols=387 Identities=16% Similarity=0.134 Sum_probs=267.3
Q ss_pred CCceEEEEEeccCC-------CCCCCCchHHHHHH--------HHHHHHhCCCEEE----EEecCCCCCCCCCCccccCC
Q 039338 81 KFTLKIAVFSRKWP-------ISTTPGGMERHAHT--------LHVALARRGHRVH----IFTSPVDNINSPSISHQEND 141 (493)
Q Consensus 81 ~~~mkIl~v~~~~p-------~~~~~gG~~~~~~~--------l~~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~ 141 (493)
++.|+|++++.+.= ..+..||...++.+ |++.|+++||+|+ |+|..... ..........
T Consensus 276 ~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~--~~g~~y~~~~ 353 (816)
T 3s28_A 276 PMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPD--AVGTTCGERL 353 (816)
T ss_dssp CCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTT--CTTSSTTSSE
T ss_pred CceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCC--CCCCccCCcc
Confidence 45789999998541 01478999999984 6667778999886 88877554 2111111110
Q ss_pred CCCC-CCCCceEeecCCC------------Cccccccch--HHHHHHh--cCCCCcEEEeCcc--chhHH---hhhccCc
Q 039338 142 DGSN-NKYPLLHFHEGEA------------DKWRYSKGW--EQFDEEN--QREPFDVVHSESV--ALPHW---LARNVTN 199 (493)
Q Consensus 142 ~~~~-~~~~~~~~~~~~~------------~~~~~~~~~--~~~~~~~--~~~~~DiI~~~~~--~~~~~---~~~~~p~ 199 (493)
.... .....+...+..+ ..+.+...+ ..+...+ ...+|||||+|.. .+.++ ...++|
T Consensus 354 e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP- 432 (816)
T 3s28_A 354 ERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVT- 432 (816)
T ss_dssp EECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCC-
T ss_pred eeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCC-
Confidence 0010 1111222221111 011111111 1122222 2458999999964 22222 223568
Q ss_pred EEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH---hC----
Q 039338 200 LAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV---YQ---- 272 (493)
Q Consensus 200 ~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~---~~---- 272 (493)
++.+.|+......... ..........+....+...+...++.+|.|+++|+..++.+.+. |+
T Consensus 433 ~V~T~Hsl~~~k~~~~-----------~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~ 501 (816)
T 3s28_A 433 QCTIAHALEKTKYPDS-----------DIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTA 501 (816)
T ss_dssp EEEECSCCHHHHSTTT-----------TTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSS
T ss_pred EEEEEecccccccccc-----------cchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhc
Confidence 9999998754321100 00000001112222333345567899999999999988853221 11
Q ss_pred --------------CCCCcEEEecCCccCCCccCCcccch-----------------hhhhhhCC--CCCCcEEEEEecc
Q 039338 273 --------------IPSERVHVILNGINENEYGVDLSLGQ-----------------SFRSRIGI--PKNASLVLGVAGR 319 (493)
Q Consensus 273 --------------~~~~~v~vi~ngvd~~~~~~~~~~~~-----------------~~r~~~~i--~~~~~~~i~~~Gr 319 (493)
...+++.|||||+|.+.|.+...... ..++.+|+ +.++ ++|+|+||
T Consensus 502 ~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~-~vIl~vGR 580 (816)
T 3s28_A 502 FTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKK-PILFTMAR 580 (816)
T ss_dssp EEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTS-CEEEEECC
T ss_pred cccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCC-eEEEEEcc
Confidence 12239999999999999877543221 33455666 4444 78889999
Q ss_pred cccccChHHHHHHHHHHHhhCCCeEEEEEeCCC-----------cHHHHhh----h--cCcEEEecCCC----HHHHHHH
Q 039338 320 LVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP-----------WEQRYKD----F--GHQVLVMGSMS----PAELRAF 378 (493)
Q Consensus 320 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~-----------~~~~~~~----l--~~~V~~~g~~~----~~~~~~~ 378 (493)
+.+.||++.+++|+..+.+..++++|+|+|+|+ ..+.+++ + .++|.|+|+++ .+++..+
T Consensus 581 l~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~ 660 (816)
T 3s28_A 581 LDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRY 660 (816)
T ss_dssp CCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHH
Confidence 999999999999999998877899999999988 2233332 2 28999999654 5889999
Q ss_pred HH-HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHH----HcCcHH
Q 039338 379 YN-AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAV----SEGPMR 452 (493)
Q Consensus 379 ~~-~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll----~~~~~~ 452 (493)
|+ ++|++|+||.. |+||++++|||+||+|||+|+.||.. |++.++.+|+++++ |+++++++|.+++ .| ++.
T Consensus 661 ~~~aaDvfV~PS~~-EgfglvllEAMA~G~PVIasd~GG~~-EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d-~~~ 737 (816)
T 3s28_A 661 ICDTKGAFVQPALY-EAFGLTVVEAMTCGLPTFATCKGGPA-EIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED-PSH 737 (816)
T ss_dssp HHHTTCEEEECCSC-BSSCHHHHHHHHTTCCEEEESSBTHH-HHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHC-THH
T ss_pred HHhcCeEEEECCCc-cCccHHHHHHHHcCCCEEEeCCCChH-HHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccC-HHH
Confidence 98 57999999965 99999999999999999999999998 99999999999999 9999999997776 77 899
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338 453 LAQRGEACRQYAASMFTANKMALAYERLFLCIK 485 (493)
Q Consensus 453 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~ 485 (493)
++++++++++++.+.|||+.+++++.++|+...
T Consensus 738 ~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 738 WDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 999999999999889999999999999998753
No 14
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=3.7e-41 Score=326.19 Aligned_cols=312 Identities=17% Similarity=0.149 Sum_probs=249.0
Q ss_pred CCceEEEEEecc-----------CCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCC
Q 039338 81 KFTLKIAVFSRK-----------WPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYP 149 (493)
Q Consensus 81 ~~~mkIl~v~~~-----------~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (493)
|++|||++++.. ||+ ...||+++++..++++|+++||+|++++..... .. ..
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~--~~--------------~~ 63 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSP--AG--------------RP 63 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSC--CC--------------ST
T ss_pred CCccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCC--CC--------------CC
Confidence 456999999998 343 256999999999999999999999999987654 11 01
Q ss_pred ceEeecCCCCccccccchHHHHHHhcCCCCcEEEeCccchhHHh--hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCc
Q 039338 150 LLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWL--ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEP 227 (493)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~ 227 (493)
.+...... .+..+.+.+++.+||+||+|+.....+. ..+.| ++++|+.....
T Consensus 64 ~~~~~~~~--------~~~~l~~~l~~~~~Dvi~~~~~~~~~~~~~~~~~p--v~~~h~~~~~~---------------- 117 (342)
T 2iuy_A 64 GLTVVPAG--------EPEEIERWLRTADVDVVHDHSGGVIGPAGLPPGTA--FISSHHFTTRP---------------- 117 (342)
T ss_dssp TEEECSCC--------SHHHHHHHHHHCCCSEEEECSSSSSCSTTCCTTCE--EEEEECSSSBC----------------
T ss_pred cceeccCC--------cHHHHHHHHHhcCCCEEEECCchhhHHHHhhcCCC--EEEecCCCCCc----------------
Confidence 12222111 1236666677779999999976432222 22344 88999864310
Q ss_pred cchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCC
Q 039338 228 MSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIP 307 (493)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~ 307 (493)
..+|.++++|+..++.+.+ ..++.+||||+|.+.+.+.... .
T Consensus 118 -----------------------~~~d~ii~~S~~~~~~~~~-----~~~~~vi~ngvd~~~~~~~~~~---------~- 159 (342)
T 2iuy_A 118 -----------------------VNPVGCTYSSRAQRAHCGG-----GDDAPVIPIPVDPARYRSAADQ---------V- 159 (342)
T ss_dssp -----------------------SCCTTEEESCHHHHHHTTC-----CTTSCBCCCCBCGGGSCCSTTC---------C-
T ss_pred -----------------------ccceEEEEcCHHHHHHHhc-----CCceEEEcCCCChhhcCccccc---------C-
Confidence 1289999999999998865 4689999999998877654321 1
Q ss_pred CCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh----cCcEEEecCCCHHHHHHHHHHcC
Q 039338 308 KNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF----GHQVLVMGSMSPAELRAFYNAID 383 (493)
Q Consensus 308 ~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l----~~~V~~~g~~~~~~~~~~~~~ad 383 (493)
.++ .+|+|+||+.+.||++.++++++.+ +++|+++|+|+..+.++++ +++|.|+|+++++++.++|++||
T Consensus 160 ~~~-~~i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 160 AKE-DFLLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CCC-SCEEEESCCCGGGTHHHHHHHHHHH-----TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCS
T ss_pred CCC-CEEEEEeccccccCHHHHHHHHHhc-----CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCC
Confidence 223 4688999999999999999999987 7899999999877666553 48999999999999999999999
Q ss_pred EEEeCCC---------CCCCCChHHHHHHHcCCcEEecCCCCCccceeee--CcceEEECCCHHHHHHHHHHHHHcCcHH
Q 039338 384 IFVNPTL---------RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD--DEFGFMFAPNVESLHKTLEAAVSEGPMR 452 (493)
Q Consensus 384 v~v~ps~---------~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~--~~~G~~~~~d~~~l~~~i~~ll~~~~~~ 452 (493)
++|+||. +.|++|++++|||++|+|||+++.++.. |++.+ +.+|+++++|+++++++|.++++
T Consensus 234 v~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~-e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~----- 307 (342)
T 2iuy_A 234 AVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLA-EIVPSVGEVVGYGTDFAPDEARRTLAGLPA----- 307 (342)
T ss_dssp EEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHH-HHGGGGEEECCSSSCCCHHHHHHHHHTSCC-----
T ss_pred EEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChH-HHhcccCCCceEEcCCCHHHHHHHHHHHHH-----
Confidence 9999996 2599999999999999999999999998 89988 88999998899999999998865
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338 453 LAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF 489 (493)
Q Consensus 453 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~ 489 (493)
++++++++.+.|+|+.+++++.++|+++++++.
T Consensus 308 ----~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 340 (342)
T 2iuy_A 308 ----SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGAT 340 (342)
T ss_dssp ----HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTCC
T ss_pred ----HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccCC
Confidence 578888988889999999999999999987653
No 15
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=100.00 E-value=1.3e-38 Score=314.02 Aligned_cols=347 Identities=12% Similarity=0.041 Sum_probs=229.9
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-CC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE-AD 159 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 159 (493)
.++|||++++..|+|....||. +.+.+++++|+++||+|+|++..... .. .....+ ......... ..
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~-~~v~~la~~L~~~GheV~Vvt~~~~~--~~--~~~~~~-------~~~~~~~~~~~~ 111 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGI-STALKLFEQFDNKKFKKRIILTDATP--NP--KDLQSF-------KSFKYVMPEEDK 111 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHH-HHHHHHHTTSCTTTCEEEEEESSCCC--CH--HHHGGG-------TTSEECCTTCCC
T ss_pred CCCceEEEEeCCCCccccccHH-HHHHHHHHHHHHcCCceEEEEecCCC--Ch--HHHHhh-------hccceeeccCCc
Confidence 4679999999998763234554 56899999999999999999986432 10 000000 000000000 00
Q ss_pred c--cccccchHHHHHHhcCCCCcEEEeCccchhHHhhh------------ccCcEEEEeccchhhhhhhhhhhhhhcCCC
Q 039338 160 K--WRYSKGWEQFDEENQREPFDVVHSESVALPHWLAR------------NVTNLAVSWHGIALESLQSGIFQDLTRKPL 225 (493)
Q Consensus 160 ~--~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~~------------~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~ 225 (493)
. .........+.......++|+||+++......... ..+ .+..+|+++.... +.
T Consensus 112 ~~~~~i~~~~~~~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~-----------~~ 179 (413)
T 2x0d_A 112 DFALQIVPFNDRYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNK-ILYIIQDFEPGFY-----------QW 179 (413)
T ss_dssp CCSEEEEECSCCTTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCC-EEEEECSCGGGGS-----------CS
T ss_pred cccceeeeccccccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccccCc-EEEEEeechhhcC-----------cc
Confidence 0 00000000011112234799999987532221111 123 6666776533210 00
Q ss_pred CccchHhHhHHHHHHHHHHHHHHhhccCC--eEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhh
Q 039338 226 EPMSLAFNKSLQGVMLKVLNEIRFFNKYA--HHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSR 303 (493)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~ 303 (493)
.....+ ....+..++ .++++|+.+++.+.+ +|++..++.+++||+|.+.+.+..
T Consensus 180 ---------~~~~~~-----~~~~~~~~~~~~vi~~S~~~~~~l~~-~g~~~~~~~~i~~g~d~~~~~~~~--------- 235 (413)
T 2x0d_A 180 ---------SSQYVL-----AESTYKYRGPQIAVFNSELLKQYFNN-KGYNFTDEYFFQPKINTTLKNYIN--------- 235 (413)
T ss_dssp ---------SHHHHH-----HHHTTSCCSCEEEEEESHHHHHHHHH-HTCCCSEEEEECCCCCHHHHTTTT---------
T ss_pred ---------ChHHHH-----HHHHhccCCceEEEEcCHHHHHHHHH-cCCCCCceEEeCCCcCchhhcccc---------
Confidence 000011 124455555 589999999999988 466667899999999876543321
Q ss_pred hCCCCCCcEEEEEeccc-ccccChHHHHHHHHHHHhhCCC---eEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHH
Q 039338 304 IGIPKNASLVLGVAGRL-VKDKGHPLLHEAFSKLMVKYPD---VYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFY 379 (493)
Q Consensus 304 ~~i~~~~~~~i~~~Gr~-~~~Kg~~~ll~a~~~l~~~~~~---~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~ 379 (493)
.+ ..++ ..++++||+ .+.||++.+++|++.+.++.|+ ++|+++|+|+....+ .+.++|.|+|+++++++.++|
T Consensus 236 ~~-~~~~-~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~~l-~~~~~v~f~G~~~~~~l~~~~ 312 (413)
T 2x0d_A 236 DK-RQKE-KIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDIAL-GKGIHLNSLGKLTLEDYADLL 312 (413)
T ss_dssp SC-CCCC-SEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCEEE-ETTEEEEEEESCCHHHHHHHH
T ss_pred cc-cCCC-CEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhhhc-CCcCcEEEcCCCCHHHHHHHH
Confidence 11 1233 456688996 6889999999999999888775 899999998764211 223789999999999999999
Q ss_pred HHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHH
Q 039338 380 NAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGE 458 (493)
Q Consensus 380 ~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~ 458 (493)
++||++|+||.. |+||++++||||||+|||+++ +|.. |++.++.+|+++++ |+++|+++|.++++| ++.+++
T Consensus 313 ~~adv~v~pS~~-E~~g~~~lEAmA~G~PVV~~~-~g~~-e~v~~~~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~--- 385 (413)
T 2x0d_A 313 KRSSIGISLMIS-PHPSYPPLEMAHFGLRVITNK-YENK-DLSNWHSNIVSLEQLNPENIAETLVELCMS-FNNRDV--- 385 (413)
T ss_dssp HHCCEEECCCSS-SSCCSHHHHHHHTTCEEEEEC-BTTB-CGGGTBTTEEEESSCSHHHHHHHHHHHHHH-TC-------
T ss_pred HhCCEEEEecCC-CCCCcHHHHHHhCCCcEEEeC-CCcc-hhhhcCCCEEEeCCCCHHHHHHHHHHHHcC-HHHHHH---
Confidence 999999999964 999999999999999999955 5667 88889999999999 999999999999999 666655
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhc
Q 039338 459 ACRQYAASMFTANKMALAYERLFLCIKNE 487 (493)
Q Consensus 459 ~~~~~~~~~fs~~~~~~~~~~~~~~i~~~ 487 (493)
++++.++ .|+|++..++ .++|+++.++
T Consensus 386 ~~~~~~~-~~~W~~~~~~-~~~~~~l~~~ 412 (413)
T 2x0d_A 386 DKKESSN-MMFYINEFNE-FSFIKEIEEK 412 (413)
T ss_dssp ---CCBS-CGGGCCCC----TTHHHHHTT
T ss_pred hHHHHHH-hCCHHHHHHH-HHHHHHHHhh
Confidence 4555554 5999999888 7777777543
No 16
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=100.00 E-value=6.3e-34 Score=294.49 Aligned_cols=331 Identities=16% Similarity=0.179 Sum_probs=245.2
Q ss_pred CCCCceEEEEEeccCCCCCCCCchHHHHHHHHHH--HHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecC
Q 039338 79 PSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVA--LARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEG 156 (493)
Q Consensus 79 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~--L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (493)
.+.++|||++++..+ ..||+++++.++++. +.+.||+|++++..... ....... ..... .+...
T Consensus 201 ~~~~~~rI~~~~~~~----~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~-~~~~~~~------~~~~~-~~~~~-- 266 (568)
T 2vsy_A 201 RSKGPLRVGFVSNGF----GAHPTGLLTVALFEALQRRQPDLQMHLFATSGDD-GSTLRTR------LAQAS-TLHDV-- 266 (568)
T ss_dssp CSSSCEEEEEEESCS----SSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCC-SCHHHHH------HHHTS-EEEEC--
T ss_pred CCCCCeEEEEECccc----ccChHHHHHHHHHhhccCCcccEEEEEEECCCCC-ccHHHHH------HHhcC-eEEEC--
Confidence 356789999999977 458999999999999 88889999999975322 0100000 00011 11111
Q ss_pred CCCccccccchHHHHHHhcCCCCcEEEeCcc-----chhHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchH
Q 039338 157 EADKWRYSKGWEQFDEENQREPFDVVHSESV-----ALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLA 231 (493)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~-----~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (493)
. . .....+.+.+++.+|||||.++. .+..+..+..| +++++|+...... . .
T Consensus 267 ~--~----~~~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~---~------- 322 (568)
T 2vsy_A 267 T--A----LGHLATAKHIRHHGIDLLFDLRGWGGGGRPEVFALRPAP-VQVNWLAYPGTSG-------A---P------- 322 (568)
T ss_dssp T--T----CCHHHHHHHHHHTTCSEEEECSSCTTCSSCHHHHTCCSS-EEEEESSSSSCCC-------C---T-------
T ss_pred C--C----CCHHHHHHHHHhCCCCEEEECCCCCCcchHHHHhcCCCc-eeEeeecCCcccC-------C---C-------
Confidence 1 0 12355667777889999997532 12233333446 8888887422100 0 0
Q ss_pred hHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCc
Q 039338 232 FNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNAS 311 (493)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~ 311 (493)
. ..+..+|.++++|+...+ |+ +++.+|||.+......+. ......|+++|++++.
T Consensus 323 -----------~----~~~~~~d~~i~~s~~~~~-----~~---~~i~~ipn~~~~~~~~~~-~~~~~~r~~~~~~~~~- 377 (568)
T 2vsy_A 323 -----------W----MDYVLGDAFALPPALEPF-----YS---EHVLRLQGAFQPSDTSRV-VAEPPSRTQCGLPEQG- 377 (568)
T ss_dssp -----------T----CCEEEECTTTSCTTTGGG-----CS---SEEEECSSCSCCCCTTCC-CCCCCCTGGGTCCTTS-
T ss_pred -----------C----ceEEEECCCcCCcccccC-----Cc---ceeEcCCCcCCCCCCCCC-CCCCCCccccCCCCCC-
Confidence 0 012346788888886543 32 789999996544321111 1223468889998765
Q ss_pred EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEe-CCCcHHHHhh----h--c-CcEEEecCCCHHHHHHHHHHcC
Q 039338 312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAG-SGPWEQRYKD----F--G-HQVLVMGSMSPAELRAFYNAID 383 (493)
Q Consensus 312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G-~g~~~~~~~~----l--~-~~V~~~g~~~~~~~~~~~~~ad 383 (493)
+++ ++|++.+ ||++.+++++.++.++.|+++|+|+| +|+..+.+++ + . ++|.|+|+++++++.++|+.||
T Consensus 378 ~v~-~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~ad 455 (568)
T 2vsy_A 378 VVL-CCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHAD 455 (568)
T ss_dssp CEE-EECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCS
T ss_pred EEE-EeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCC
Confidence 444 8999999 99999999999999888999999999 8877665554 2 2 6899999999999999999999
Q ss_pred EEEeCCCCCCCCChHHHHHHHcCCcEEe-------cCCC-------CCccceeeeCcceEEECCCHHHHHHHHHHHHHcC
Q 039338 384 IFVNPTLRPQGLDLTLMEAMMSGKPVMA-------SRFP-------SIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEG 449 (493)
Q Consensus 384 v~v~ps~~~eg~~~~~~EAm~~G~PvI~-------s~~~-------~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~ 449 (493)
++|+||.+ |+|++++|||+||+|||+ ++.+ |.+ |++.+ |+++++++|.++++|
T Consensus 456 v~v~ps~~--~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~-e~v~~---------~~~~la~~i~~l~~~- 522 (568)
T 2vsy_A 456 LFLDTHPY--NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLD-EMNVA---------DDAAFVAKAVALASD- 522 (568)
T ss_dssp EEECCSSS--CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCG-GGBCS---------SHHHHHHHHHHHHHC-
T ss_pred EEeeCCCC--CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCCh-hhhcC---------CHHHHHHHHHHHhcC-
Confidence 99999954 999999999999999999 9999 888 76644 789999999999999
Q ss_pred cHHHHHHHHHHHHHH--HHhcCHHHHHHHHHHHHHHHhhc
Q 039338 450 PMRLAQRGEACRQYA--ASMFTANKMALAYERLFLCIKNE 487 (493)
Q Consensus 450 ~~~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~~~~i~~~ 487 (493)
++.+++|++++++.+ .+.|+|+.++++++++|++++++
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 523 PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 66799999999999999998865
No 17
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=100.00 E-value=4e-34 Score=282.31 Aligned_cols=196 Identities=16% Similarity=0.204 Sum_probs=162.2
Q ss_pred HhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChH
Q 039338 248 RFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHP 327 (493)
Q Consensus 248 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~ 327 (493)
..++++|.++++|+.+++.+.+ ++ ++.+||||+|.+.|.+.... +.+++.+++|+||+.+.||+
T Consensus 174 ~~~~~ad~vi~~S~~~~~~~~~-~~----~i~vipngvd~~~f~~~~~~----------~~~~~~~i~~vGrl~~~Kg~- 237 (406)
T 2hy7_A 174 RVAPTLDVIALVSPAMAAEVVS-RD----NVFHVGHGVDHNLDQLGDPS----------PYAEGIHAVAVGSMLFDPEF- 237 (406)
T ss_dssp HHGGGCSEEEESCGGGGGGCSC-ST----TEEECCCCBCTTHHHHHCSC----------SCCSSEEEEEECCTTBCHHH-
T ss_pred HHHHhCCEEEEcCHHHHHHHHh-cC----CEEEEcCCcChHhcCccccc----------ccCCCcEEEEEeccccccCH-
Confidence 5688999999999999988765 23 89999999999877543211 12333788899999999998
Q ss_pred HHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh--hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHH--
Q 039338 328 LLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD--FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAM-- 403 (493)
Q Consensus 328 ~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~--l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm-- 403 (493)
+..+.+..++++|+|+|+|+ .++ +.++|.|+|+++++++.++|++||++|+||. .|++|++++|||
T Consensus 238 -----~~~l~~~~~~~~l~ivG~g~----~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~-~E~~~~~~lEAm~K 307 (406)
T 2hy7_A 238 -----FVVASKAFPQVTFHVIGSGM----GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYA-SEQVPVYLADSSMK 307 (406)
T ss_dssp -----HHHHHHHCTTEEEEEESCSS----CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBS-CSCCCTTHHHHCHH
T ss_pred -----HHHHHHhCCCeEEEEEeCch----HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCC-cccCchHHHHHHHH
Confidence 44455566899999999987 333 3489999999999999999999999999996 599999999999
Q ss_pred -----HcCCcEEecCCCCCccceeeeCcceEE-ECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 039338 404 -----MSGKPVMASRFPSIKGTIVVDDEFGFM-FAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALA 476 (493)
Q Consensus 404 -----~~G~PvI~s~~~~~~~e~v~~~~~G~~-~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 476 (493)
+||+|||+|+. +.++.+|++ +++ |+++|+++|.+++++ ++ + ...+.|+|+.++++
T Consensus 308 l~eYla~G~PVIas~~-------v~~~~~G~l~v~~~d~~~la~ai~~ll~~-~~---------~-~~~~~~sw~~~a~~ 369 (406)
T 2hy7_A 308 LLQYDFFGLPAVCPNA-------VVGPYKSRFGYTPGNADSVIAAITQALEA-PR---------V-RYRQCLNWSDTTDR 369 (406)
T ss_dssp HHHHHHHTCCEEEEGG-------GTCSCSSEEEECTTCHHHHHHHHHHHHHC-CC---------C-CCSCCCBHHHHHHH
T ss_pred HHHHhhCCCcEEEehh-------cccCcceEEEeCCCCHHHHHHHHHHHHhC-cc---------h-hhhhcCCHHHHHHH
Confidence 99999999986 456788999 999 999999999999998 54 1 22356999999999
Q ss_pred HHHH--HHHHhhc
Q 039338 477 YERL--FLCIKNE 487 (493)
Q Consensus 477 ~~~~--~~~i~~~ 487 (493)
++++ |.++.-.
T Consensus 370 ~~~~~~y~~~~~~ 382 (406)
T 2hy7_A 370 VLDPRAYPETRLY 382 (406)
T ss_dssp HHCGGGSGGGBSS
T ss_pred HHHhhcccccCcC
Confidence 9999 8876543
No 18
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=100.00 E-value=5.4e-33 Score=271.22 Aligned_cols=324 Identities=16% Similarity=0.123 Sum_probs=232.0
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC--C-
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA--D- 159 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 159 (493)
+|||++++. ..||....+..|+++|+++||+|++++..... .. ... ...+..+....... .
T Consensus 6 ~mkIl~~~~------~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~--~~--~~~------~~~g~~~~~~~~~~~~~~ 69 (364)
T 1f0k_A 6 GKRLMVMAG------GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRM--EA--DLV------PKHGIEIDFIRISGLRGK 69 (364)
T ss_dssp -CEEEEECC------SSHHHHHHHHHHHHHHHTTTCEEEEEECTTST--HH--HHG------GGGTCEEEECCCCCCTTC
T ss_pred CcEEEEEeC------CCccchhHHHHHHHHHHHcCCEEEEEecCCcc--hh--hhc------cccCCceEEecCCccCcC
Confidence 389999984 44799999999999999999999999976532 10 000 00011111111100 0
Q ss_pred --------ccccccchHHHHHHhcCCCCcEEEeCccc--hhHH---hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCC
Q 039338 160 --------KWRYSKGWEQFDEENQREPFDVVHSESVA--LPHW---LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLE 226 (493)
Q Consensus 160 --------~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~ 226 (493)
..........+.+.+++.+||+||+++.. +... ...++| ++++.|+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~~~---------------- 132 (364)
T 1f0k_A 70 GIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIP-VVLHEQNGIAG---------------- 132 (364)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCC-EEEEECSSSCC----------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCC-EEEEecCCCCc----------------
Confidence 01111233455666667799999999752 2222 223567 88888874210
Q ss_pred ccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCC
Q 039338 227 PMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGI 306 (493)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i 306 (493)
. . ...+.+.+|.+++.++.. + + ++.+++||+|.+.+.+.. .++++++
T Consensus 133 --------~----~-----~~~~~~~~d~v~~~~~~~-------~--~--~~~~i~n~v~~~~~~~~~-----~~~~~~~ 179 (364)
T 1f0k_A 133 --------L----T-----NKWLAKIATKVMQAFPGA-------F--P--NAEVVGNPVRTDVLALPL-----PQQRLAG 179 (364)
T ss_dssp --------H----H-----HHHHTTTCSEEEESSTTS-------S--S--SCEECCCCCCHHHHTSCC-----HHHHHTT
T ss_pred --------H----H-----HHHHHHhCCEEEecChhh-------c--C--CceEeCCccchhhcccch-----hhhhccc
Confidence 0 0 113456789999988764 2 2 678999999987654421 2456777
Q ss_pred CCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeE-EEEEeCCCcHHHHh----hhc-CcEEEecCCCHHHHHHHHH
Q 039338 307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVY-LIVAGSGPWEQRYK----DFG-HQVLVMGSMSPAELRAFYN 380 (493)
Q Consensus 307 ~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~-l~i~G~g~~~~~~~----~l~-~~V~~~g~~~~~~~~~~~~ 380 (493)
+.+++.++++.|++.+.|+.+.+++|+..+.+ +++ ++++|+|+. +.++ +++ ++|.|.|++ +++.++|+
T Consensus 180 ~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~~~~l~i~G~~~~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~ 253 (364)
T 1f0k_A 180 REGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIWHQSGKGSQ-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYA 253 (364)
T ss_dssp CCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEEEECCTTCH-HHHHHHHHHTTCTTSEEESCC--SCHHHHHH
T ss_pred CCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---CcEEEEEcCCchH-HHHHHHHhhcCCCceEEecch--hhHHHHHH
Confidence 77765677778899999999999999999965 678 577898874 3333 333 689999999 79999999
Q ss_pred HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc------ceeeeCcceEEECC-C--HHHHHHHHHHHHHcCcH
Q 039338 381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG------TIVVDDEFGFMFAP-N--VESLHKTLEAAVSEGPM 451 (493)
Q Consensus 381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~------e~v~~~~~G~~~~~-d--~~~l~~~i~~ll~~~~~ 451 (493)
.||++|+|| | |++++|||++|+|||+++.+|.++ +.+.+.+.|+++++ | +++++++|.++ | ++
T Consensus 254 ~ad~~v~~s----g-~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~-~~ 325 (364)
T 1f0k_A 254 WADVVVCRS----G-ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--S-RE 325 (364)
T ss_dssp HCSEEEECC----C-HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--C-HH
T ss_pred hCCEEEECC----c-hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--C-HH
Confidence 999999998 2 899999999999999999988642 13444556999998 7 99999999999 6 89
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc
Q 039338 452 RLAQRGEACRQYAASMFTANKMALAYERLFLCIKNE 487 (493)
Q Consensus 452 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~ 487 (493)
.++++++++++.++ .|+|++++++++++|++.-..
T Consensus 326 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~~~~~ 360 (364)
T 1f0k_A 326 TLLTMAERARAASI-PDATERVANEVSRVARALEHH 360 (364)
T ss_dssp HHHHHHHHHHHTCC-TTHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHhhc-cCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999876 599999999999999876543
No 19
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=100.00 E-value=2.5e-33 Score=275.60 Aligned_cols=358 Identities=11% Similarity=0.066 Sum_probs=242.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCC-EEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccc
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH-RVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWR 162 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (493)
|||++++... .+ ...+..++++|.++|+ ++.++...... .......... ..... ..+...........
T Consensus 1 mkIl~v~~~~------~~-~~~~~~l~~~L~~~g~~~~~v~~~~~~~--~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~ 69 (384)
T 1vgv_A 1 MKVLTVFGTR------PE-AIKMAPLVHALAKDPFFEAKVCVTAQHR--EMLDQVLKLF-SIVPD-YDLNIMQPGQGLTE 69 (384)
T ss_dssp CEEEEEECSH------HH-HHHHHHHHHHHHHSTTCEEEEEECCSSG--GGGHHHHHHH-TCCCS-EECCCCSTTSCHHH
T ss_pred CeEEEEeccc------HH-HHHHHHHHHHHHhCCCCceEEEEcCCCH--HHHHHHHHHc-CCCCC-cceecCCCCccHHH
Confidence 8999998632 22 2346789999999994 88877654332 1000010000 00000 00001000001111
Q ss_pred -cccchHHHHHHhcCCCCcEEEeCcc---chhHH---hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338 163 -YSKGWEQFDEENQREPFDVVHSESV---ALPHW---LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS 235 (493)
Q Consensus 163 -~~~~~~~~~~~~~~~~~DiI~~~~~---~~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (493)
.......+.+.+++.+||+||+++. .++.. ...++| ++.+.|+..... .+ . .
T Consensus 70 ~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip-~v~~~~~~~~~~----~~--------~--------~ 128 (384)
T 1vgv_A 70 ITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIP-VGHVEAGLRTGD----LY--------S--------P 128 (384)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCC-EEEESCCCCCSC----TT--------S--------S
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEeccccccc----cc--------C--------C
Confidence 1223455666777889999999864 12211 223567 888888753100 00 0 0
Q ss_pred HHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCCccCCc-c----cchhhhhhhC-CCC
Q 039338 236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENEYGVDL-S----LGQSFRSRIG-IPK 308 (493)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~~~~~~-~----~~~~~r~~~~-i~~ 308 (493)
+.....+. ...+.+|.++++|+..++.+.+ +|++.+++.+++||+ |...+.+.. . ....+++++| ++.
T Consensus 129 ~~~~~~~~----~~~~~~d~ii~~s~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (384)
T 1vgv_A 129 WPEEANRT----LTGHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDP 203 (384)
T ss_dssp TTHHHHHH----HHHTTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCT
T ss_pred CchHhhHH----HHHhhccEEEcCcHHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCC
Confidence 00111111 1235699999999999999976 688888999999995 432221110 0 0124677777 766
Q ss_pred CCcEEEEEecccccc-cChHHHHHHHHHHHhhCCCeEEEEE-eCCC-cHHHHhhh-c--CcEEEecCCCHHHHHHHHHHc
Q 039338 309 NASLVLGVAGRLVKD-KGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-WEQRYKDF-G--HQVLVMGSMSPAELRAFYNAI 382 (493)
Q Consensus 309 ~~~~~i~~~Gr~~~~-Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-~~~~~~~l-~--~~V~~~g~~~~~~~~~~~~~a 382 (493)
+++++++++||+.+. ||++.+++|+..+.++.+++++++. |.++ ..+.++++ . ++|.|+|+++.+++.++|+.|
T Consensus 204 ~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~a 283 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHA 283 (384)
T ss_dssp TSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHC
T ss_pred CCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhC
Confidence 666788899999876 9999999999999888889999885 5443 34455443 2 689999999889999999999
Q ss_pred CEEEeCCCCCCCCChHHHHHHHcCCcEEecCC-CCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHH
Q 039338 383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF-PSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACR 461 (493)
Q Consensus 383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~-~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~ 461 (493)
|++|.|| |.+++|||++|+|||+++. ++.. |++.++ +|+++++|+++++++|.++++| ++.+++|+++++
T Consensus 284 d~~v~~S------g~~~lEA~a~G~PvI~~~~~~~~~-e~v~~g-~g~lv~~d~~~la~~i~~ll~d-~~~~~~~~~~~~ 354 (384)
T 1vgv_A 284 WLILTDS------GGIQEEAPSLGKPVLVMRDTTERP-EAVTAG-TVRLVGTDKQRIVEEVTRLLKD-ENEYQAMSRAHN 354 (384)
T ss_dssp SEEEESS------STGGGTGGGGTCCEEEESSCCSCH-HHHHHT-SEEEECSSHHHHHHHHHHHHHC-HHHHHHHHSSCC
T ss_pred cEEEECC------cchHHHHHHcCCCEEEccCCCCcc-hhhhCC-ceEEeCCCHHHHHHHHHHHHhC-hHHHhhhhhccC
Confidence 9999998 2358999999999999986 7777 787777 9999977999999999999998 899999999998
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhcc
Q 039338 462 QYAASMFTANKMALAYERLFLCIKNET 488 (493)
Q Consensus 462 ~~~~~~fs~~~~~~~~~~~~~~i~~~~ 488 (493)
++. +.|+|+++++.+.++|+++.+.+
T Consensus 355 ~~~-~~~~~~~i~~~~~~~~~~~~~~~ 380 (384)
T 1vgv_A 355 PYG-DGQACSRILEALKNNRISLGSHH 380 (384)
T ss_dssp TTC-CSCHHHHHHHHHHHTCCCC----
T ss_pred CCc-CCCHHHHHHHHHHHHHHhhcccc
Confidence 876 45999999999999998877654
No 20
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=100.00 E-value=6e-33 Score=271.96 Aligned_cols=348 Identities=12% Similarity=0.065 Sum_probs=235.9
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-C-CEEEEEecCCCCCCCCCCccccCCCCCCCCCCc-eEeecCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR-G-HRVHIFTSPVDNINSPSISHQENDDGSNNKYPL-LHFHEGE 157 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G-~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 157 (493)
+++|||++++..+| ..| .+..++++|+++ | |+|.+++..... ......... .+... +......
T Consensus 6 ~~~mkIl~v~~~~~---~~~----~~~~l~~~L~~~~~~~~v~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~ 71 (375)
T 3beo_A 6 TERLKVMTIFGTRP---EAI----KMAPLVLELQKHPEKIESIVTVTAQHR--QMLDQVLSI-----FGITPDFDLNIMK 71 (375)
T ss_dssp SSCEEEEEEECSHH---HHH----HHHHHHHHHTTCTTTEEEEEEECCSSS--HHHHHHHHH-----HTCCCSEECCCCC
T ss_pred CcCceEEEEecCcH---HHH----HHHHHHHHHHhCCCCCCeEEEEcCCCH--HHHHHHHHH-----cCCCCccccccCC
Confidence 44699999986432 112 356788888876 4 888877754432 100000000 00000 1111110
Q ss_pred CC-c--cccccchHHHHHHhcCCCCcEEEeCccc---hhH-H--hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCcc
Q 039338 158 AD-K--WRYSKGWEQFDEENQREPFDVVHSESVA---LPH-W--LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPM 228 (493)
Q Consensus 158 ~~-~--~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~-~--~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ 228 (493)
+. . .........+.+.+++.+||+||+|+.. +.. . ...++| ++.+.|+.... ..+.
T Consensus 72 ~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip-~v~~~~~~~~~----~~~~---------- 136 (375)
T 3beo_A 72 DRQTLIDITTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIP-VGHVEAGLRTW----DKYS---------- 136 (375)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCC-EEEESCCCCCS----CTTS----------
T ss_pred CcccHHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEecccccc----cccC----------
Confidence 10 0 1112234456666777899999998642 221 1 223567 77777764110 0000
Q ss_pred chHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCC-ccCCCccCCcccchhhhhhhCCC
Q 039338 229 SLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNG-INENEYGVDLSLGQSFRSRIGIP 307 (493)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~ 307 (493)
.+...+.+ ....+.+|.++++|+..++.+.+ +|++.+++.+++|| +|...+.+.......+++++ +
T Consensus 137 ------~~~~~~~~----~~~~~~~d~ii~~s~~~~~~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~--~ 203 (375)
T 3beo_A 137 ------PYPEEMNR----QLTGVMADLHFSPTAKSATNLQK-ENKDESRIFITGNTAIDALKTTVKETYSHPVLEKL--G 203 (375)
T ss_dssp ------STTHHHHH----HHHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT--T
T ss_pred ------CChhHhhh----hHHhhhhheeeCCCHHHHHHHHH-cCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc--c
Confidence 00001111 11234589999999999999987 68888899999999 78765544322223455544 2
Q ss_pred CCCcEEEEEecccccc-cChHHHHHHHHHHHhhCCCeEEEEEeCCCc---HHHHhhh-c--CcEEEecCCCHHHHHHHHH
Q 039338 308 KNASLVLGVAGRLVKD-KGHPLLHEAFSKLMVKYPDVYLIVAGSGPW---EQRYKDF-G--HQVLVMGSMSPAELRAFYN 380 (493)
Q Consensus 308 ~~~~~~i~~~Gr~~~~-Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~---~~~~~~l-~--~~V~~~g~~~~~~~~~~~~ 380 (493)
+++++++++||+.+. ||++.+++|+..+.++.|++++++ |.|+. .+.++++ . ++|.|+|+++..++.++|+
T Consensus 204 -~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 281 (375)
T 3beo_A 204 -NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAA 281 (375)
T ss_dssp -TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHH
T ss_pred -CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHH
Confidence 344778899999875 999999999999988888999655 66654 2344443 3 7999999999999999999
Q ss_pred HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCC-CCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHH
Q 039338 381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF-PSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEA 459 (493)
Q Consensus 381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~-~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~ 459 (493)
.||++|+|| |.+++|||++|+|||+++. ++.+ |++.++ +|+++++|+++++++|.++++| ++.+++|+++
T Consensus 282 ~ad~~v~~s------g~~~lEA~a~G~Pvi~~~~~~~~~-e~v~~g-~g~~v~~d~~~la~~i~~ll~~-~~~~~~~~~~ 352 (375)
T 3beo_A 282 RSYLMLTDS------GGVQEEAPSLGVPVLVLRDTTERP-EGIEAG-TLKLAGTDEETIFSLADELLSD-KEAHDKMSKA 352 (375)
T ss_dssp TCSEEEECC------HHHHHHHHHHTCCEEECSSCCSCH-HHHHTT-SEEECCSCHHHHHHHHHHHHHC-HHHHHHHCCC
T ss_pred hCcEEEECC------CChHHHHHhcCCCEEEecCCCCCc-eeecCC-ceEEcCCCHHHHHHHHHHHHhC-hHhHhhhhhc
Confidence 999999988 5679999999999999964 8877 777766 9999977999999999999998 8999999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHH
Q 039338 460 CRQYAASMFTANKMALAYERLFL 482 (493)
Q Consensus 460 ~~~~~~~~fs~~~~~~~~~~~~~ 482 (493)
++++. +.|+|+++++.++++++
T Consensus 353 ~~~~~-~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 353 SNPYG-DGRASERIVEAILKHFN 374 (375)
T ss_dssp CCTTC-CSCHHHHHHHHHHHHTT
T ss_pred CCCCC-CCcHHHHHHHHHHHHhh
Confidence 98876 45999999999988764
No 21
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.96 E-value=9.9e-29 Score=246.43 Aligned_cols=200 Identities=16% Similarity=0.181 Sum_probs=165.1
Q ss_pred CCcEEEecCCccCCCccCCcc---c--chhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCC----eEE
Q 039338 275 SERVHVILNGINENEYGVDLS---L--GQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYL 345 (493)
Q Consensus 275 ~~~v~vi~ngvd~~~~~~~~~---~--~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~----~~l 345 (493)
..++.++|||||.+.|.+... . ...+|++++ ++ .+|+++||+++.||++.+++|++++.+++|+ ++|
T Consensus 218 ~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~-~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~L 293 (482)
T 1uqt_A 218 AFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK---NV-QNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRY 293 (482)
T ss_dssp EEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT---TC-EEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEE
T ss_pred EEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC---CC-EEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEE
Confidence 357899999999887754211 1 346777776 33 6788999999999999999999999888764 789
Q ss_pred EEEeCC-----Cc----HHHHhhhc------------CcEE-EecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHH
Q 039338 346 IVAGSG-----PW----EQRYKDFG------------HQVL-VMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAM 403 (493)
Q Consensus 346 ~i~G~g-----~~----~~~~~~l~------------~~V~-~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm 403 (493)
+++|.+ +. ++.++++. ..|. +.|.++++++..+|+.||++|+||.+ ||||++++|||
T Consensus 294 v~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~-EGfgLv~lEAm 372 (482)
T 1uqt_A 294 TQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYV 372 (482)
T ss_dssp EEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSS-BSCCHHHHHHH
T ss_pred EEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCc-ccCCchHHHHH
Confidence 999852 21 22233321 1366 46899999999999999999999976 99999999999
Q ss_pred HcCC-----cEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338 404 MSGK-----PVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY 477 (493)
Q Consensus 404 ~~G~-----PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~ 477 (493)
+||+ |||+|+.+|.. +.+ .+|+++++ |+++++++|.+++++++++++++++++++.+.+ |||+..++++
T Consensus 373 A~g~~~~~gpvV~S~~~G~~-~~l---~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-~s~~~~a~~~ 447 (482)
T 1uqt_A 373 AAQDPANPGVLVLSQFAGAA-NEL---TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINHWQECF 447 (482)
T ss_dssp HHSCTTSCCEEEEETTBGGG-GTC---TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHH
T ss_pred HhCCCCCCCCEEEECCCCCH-HHh---CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHH
Confidence 9997 89999988877 444 27999999 999999999999997577889999999999987 8999999999
Q ss_pred HHHHHHH
Q 039338 478 ERLFLCI 484 (493)
Q Consensus 478 ~~~~~~i 484 (493)
.+.|+++
T Consensus 448 l~~l~~~ 454 (482)
T 1uqt_A 448 ISDLKQI 454 (482)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 9999887
No 22
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.96 E-value=1e-28 Score=219.61 Aligned_cols=182 Identities=23% Similarity=0.366 Sum_probs=159.5
Q ss_pred ecCCccCCCcc--CCcc----cchhhhhhhCCCCCCcEEEEEecccc-cccChHHHHHHHHHHH--hhCCCeEEEEEeCC
Q 039338 281 ILNGINENEYG--VDLS----LGQSFRSRIGIPKNASLVLGVAGRLV-KDKGHPLLHEAFSKLM--VKYPDVYLIVAGSG 351 (493)
Q Consensus 281 i~ngvd~~~~~--~~~~----~~~~~r~~~~i~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~--~~~~~~~l~i~G~g 351 (493)
||||+|.+.|. +... ....++++++++++ .+|+|+|++. +.||++.+++++..+. +++++++|+++|.+
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~--~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~ 79 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG 79 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCB
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCCC--CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCC
Confidence 79999999987 6531 15678999998754 4788999999 9999999999999997 77789999999998
Q ss_pred C--cHHHHhhhc---CcEEE-ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeC
Q 039338 352 P--WEQRYKDFG---HQVLV-MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDD 425 (493)
Q Consensus 352 ~--~~~~~~~l~---~~V~~-~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~ 425 (493)
+ ..+.++++. .+|.| +|+++++++.++|+.||++|+||.. |++|++++|||++|+|||+++.++.. +++ ++
T Consensus 80 ~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~-e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~~-~~ 156 (200)
T 2bfw_A 80 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DII-TN 156 (200)
T ss_dssp CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSC-CSSCHHHHHHHHTTCEEEEESCHHHH-HHC-CT
T ss_pred ChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCC-CCccHHHHHHHHCCCCEEEeCCCChH-HHc-CC
Confidence 7 555555433 38999 9999999999999999999999965 99999999999999999999999988 888 89
Q ss_pred cceEEECC-CHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHhcC
Q 039338 426 EFGFMFAP-NVESLHKTLEAAVS-EGPMRLAQRGEACRQYAASMFT 469 (493)
Q Consensus 426 ~~G~~~~~-d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs 469 (493)
.+|+++++ |+++++++|.++++ + ++.+++|++++++++++ ||
T Consensus 157 ~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 157 ETGILVKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp TTCEEECTTCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH-TC
T ss_pred CceEEecCCCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHh-cC
Confidence 99999998 99999999999999 8 99999999999999988 76
No 23
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.96 E-value=2.7e-28 Score=243.59 Aligned_cols=303 Identities=13% Similarity=0.143 Sum_probs=201.9
Q ss_pred CCCCcEEEeCccc---hhHHhhh---ccCcEEEEeccchhhhh-h--h--hhhhhhhcCCCCccchHhHhHHHHHHHHHH
Q 039338 176 REPFDVVHSESVA---LPHWLAR---NVTNLAVSWHGIALESL-Q--S--GIFQDLTRKPLEPMSLAFNKSLQGVMLKVL 244 (493)
Q Consensus 176 ~~~~DiI~~~~~~---~~~~~~~---~~p~~v~~~h~~~~~~~-~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (493)
..+|||+|+|.+. .+.++.. .++ .|.|+|...+... . . +++..+... +. .....-.......-
T Consensus 179 ~~~pdIiH~HDW~tg~~~~~Lk~~~~~i~-tVfTiH~telGR~lagqg~~~~y~~L~~~-~~----d~ea~~~~i~~~~~ 252 (725)
T 3nb0_A 179 SQHAIVAHFHEWLAGVALPLCRKRRIDVV-TIFTTHATLLGRYLCASGSFDFYNCLESV-DV----DHEAGRFGIYHRYC 252 (725)
T ss_dssp CSEEEEEEEESGGGCTHHHHHHHTTCSCE-EEEEESSCHHHHHHTSSSCSCHHHHGGGC-CH----HHHHHHTTCHHHHH
T ss_pred CCCCcEEEeCchhhhHHHHHHHHhCCCCC-EEEEEecchhhhhhhhcCCCchhhhhhhc-CC----ChhhhhhchhHHHH
Confidence 4679999999752 2233322 345 9999998643221 0 0 111111100 00 00000000111222
Q ss_pred HHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcc-------cchhhhh--------hhCCCCC
Q 039338 245 NEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLS-------LGQSFRS--------RIGIPKN 309 (493)
Q Consensus 245 ~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~-------~~~~~r~--------~~~i~~~ 309 (493)
.++.....||.|+++|+.+++.+...++.+.+.+ |+||+|.+.|.+... .+..+.+ .++++.+
T Consensus 253 ~EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~d 330 (725)
T 3nb0_A 253 IERAAAHSADVFTTVSQITAFEAEHLLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLD 330 (725)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHHHHHTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGG
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHHHhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Confidence 3456678999999999999999998777665544 999999999987521 1122222 2256555
Q ss_pred CcEEEEEecccc-cccChHHHHHHHHHHHhh----C---CCeEEEEEeCCCcH---------------------------
Q 039338 310 ASLVLGVAGRLV-KDKGHPLLHEAFSKLMVK----Y---PDVYLIVAGSGPWE--------------------------- 354 (493)
Q Consensus 310 ~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~----~---~~~~l~i~G~g~~~--------------------------- 354 (493)
+.++|+.+||+. .+||++.+++|+.+|... + .-+.|+++..+...
T Consensus 331 k~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~ 410 (725)
T 3nb0_A 331 NTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIG 410 (725)
T ss_dssp GEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHh
Confidence 657777789999 789999999999998753 1 23566666533100
Q ss_pred ------------------------------H------------------------------------HHhhhc------C
Q 039338 355 ------------------------------Q------------------------------------RYKDFG------H 362 (493)
Q Consensus 355 ------------------------------~------------------------------------~~~~l~------~ 362 (493)
+ .+++++ +
T Consensus 411 ~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~d 490 (725)
T 3nb0_A 411 KRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSD 490 (725)
T ss_dssp HHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTC
T ss_pred HHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCC
Confidence 0 001111 2
Q ss_pred c--EEEe-cCCCHH------HHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeC-------c
Q 039338 363 Q--VLVM-GSMSPA------ELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDD-------E 426 (493)
Q Consensus 363 ~--V~~~-g~~~~~------~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~-------~ 426 (493)
+ |+|+ ++++.. ++.++|+.||++|+||.+ ||||++++|||+||+|||+++.+|.. +.+.++ .
T Consensus 491 rVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~-EgfGl~~LEAmA~G~PvI~s~~gG~~-d~V~dg~~~~~~~~ 568 (725)
T 3nb0_A 491 RVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYY-EPWGYTPAECTVMGVPSITTNVSGFG-SYMEDLIETNQAKD 568 (725)
T ss_dssp SEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSS-BSSCHHHHHHHHTTCCEEEETTBHHH-HHHHTTSCHHHHHH
T ss_pred ceeEEEeccccCCCCccchhHHHHHHhhceEEEecccc-CCCCHHHHHHHHcCCCEEEeCCCChh-hhhhccccccCCCC
Confidence 2 4555 566654 589999999999999965 99999999999999999999999998 777664 4
Q ss_pred ceEEEC---C-CHHHHHHHHHHHH----HcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338 427 FGFMFA---P-NVESLHKTLEAAV----SEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF 489 (493)
Q Consensus 427 ~G~~~~---~-d~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~ 489 (493)
+|+++. + |+++++++|.+++ +.++..+..+++++++.++ .|+|++++++|+++|++++.+..
T Consensus 569 tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~-~FSWe~iA~~Yl~~Ye~aL~~~~ 638 (725)
T 3nb0_A 569 YGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD-LLDWKRMGLEYVKARQLALRRGY 638 (725)
T ss_dssp TTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG-GGBHHHHHHHHHHHHHHHHHHHC
T ss_pred ceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhhcc
Confidence 798884 3 5665555555554 4447778899998887775 59999999999999999987643
No 24
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.95 E-value=1.8e-27 Score=233.12 Aligned_cols=343 Identities=10% Similarity=0.008 Sum_probs=221.0
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCc-eEeecCCC-Cc
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPL-LHFHEGEA-DK 160 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~ 160 (493)
|||++++...| +. .....++++|.++ ||+|.+++..... ......... .+... +....... ..
T Consensus 6 mkIl~v~~~~~------~~-~~~~~l~~~L~~~~g~~v~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 71 (376)
T 1v4v_A 6 KRVVLAFGTRP------EA-TKMAPVYLALRGIPGLKPLVLLTGQHR--EQLRQALSL-----FGIQEDRNLDVMQERQA 71 (376)
T ss_dssp EEEEEEECSHH------HH-HHHHHHHHHHHTSTTEEEEEEECSSCH--HHHHHHHHT-----TTCCCSEECCCCSSCCC
T ss_pred eEEEEEEeccH------HH-HHHHHHHHHHHhCCCCceEEEEcCCcH--HHHHHHHHH-----cCCCcccccccCCCCcc
Confidence 89999997432 11 1356789999998 8998887654321 100000000 01110 11110000 00
Q ss_pred c--ccccchHHHHHHhcCCCCcEEEeCccc---hhH---HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHh
Q 039338 161 W--RYSKGWEQFDEENQREPFDVVHSESVA---LPH---WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAF 232 (493)
Q Consensus 161 ~--~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (493)
. ........+.+.+++.+||+||+|+.. +.. ....++| ++...++.... ..+.
T Consensus 72 ~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip-~v~~~~~~~~~----~~~~-------------- 132 (376)
T 1v4v_A 72 LPDLAARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIP-VGHVEAGLRSG----NLKE-------------- 132 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCC-EEEETCCCCCS----CTTS--------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCC-EEEEeCCCccc----cccC--------------
Confidence 0 011233456667778899999998542 221 1223567 65443332100 0000
Q ss_pred HhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCCccCCcccchhhhhhhCCCCCCc
Q 039338 233 NKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENEYGVDLSLGQSFRSRIGIPKNAS 311 (493)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~~~~~~~~~~~~r~~~~i~~~~~ 311 (493)
........+ .+.+.+|.++++|+..++.+.+ +|++.+++.+++|++ |...+... ...+++++ + +++
T Consensus 133 -~~~~~~~~~-----~~~~~~~~~~~~s~~~~~~l~~-~g~~~~ki~vi~n~~~d~~~~~~~---~~~~~~~~--~-~~~ 199 (376)
T 1v4v_A 133 -PFPEEANRR-----LTDVLTDLDFAPTPLAKANLLK-EGKREEGILVTGQTGVDAVLLAAK---LGRLPEGL--P-EGP 199 (376)
T ss_dssp -STTHHHHHH-----HHHHHCSEEEESSHHHHHHHHT-TTCCGGGEEECCCHHHHHHHHHHH---HCCCCTTC--C-SSC
T ss_pred -CCchHHHHH-----HHHHHhceeeCCCHHHHHHHHH-cCCCcceEEEECCchHHHHhhhhh---hhHHHHhc--C-CCC
Confidence 000011111 2345689999999999999987 588888999999975 43222111 11223333 2 344
Q ss_pred EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEE-eCCC-cHHHHhhh---cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338 312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-WEQRYKDF---GHQVLVMGSMSPAELRAFYNAIDIFV 386 (493)
Q Consensus 312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-~~~~~~~l---~~~V~~~g~~~~~~~~~~~~~adv~v 386 (493)
++++++||+...||++.+++|++.+.++.++++++++ |+++ ..+.++++ .++|.|+|+++..++.++|+.||++|
T Consensus 200 ~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v 279 (376)
T 1v4v_A 200 YVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLV 279 (376)
T ss_dssp EEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEE
T ss_pred EEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEE
Confidence 7778899998888999999999999888888998886 7665 35555544 26899999998889999999999999
Q ss_pred eCCCCCCCCChHHHHHHHcCCcEEec-CCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Q 039338 387 NPTLRPQGLDLTLMEAMMSGKPVMAS-RFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAA 465 (493)
Q Consensus 387 ~ps~~~eg~~~~~~EAm~~G~PvI~s-~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 465 (493)
.|| + | .++|||++|+|||++ +.++.. +++. +++|++++.|+++|+++|.++++| ++.+++|++++
T Consensus 280 ~~S---~--g-~~lEA~a~G~PvI~~~~~~~~~-~~~~-~g~g~lv~~d~~~la~~i~~ll~d-~~~~~~~~~~~----- 345 (376)
T 1v4v_A 280 TDS---G--G-LQEEGAALGVPVVVLRNVTERP-EGLK-AGILKLAGTDPEGVYRVVKGLLEN-PEELSRMRKAK----- 345 (376)
T ss_dssp ESC---H--H-HHHHHHHTTCCEEECSSSCSCH-HHHH-HTSEEECCSCHHHHHHHHHHHHTC-HHHHHHHHHSC-----
T ss_pred ECC---c--C-HHHHHHHcCCCEEeccCCCcch-hhhc-CCceEECCCCHHHHHHHHHHHHhC-hHhhhhhcccC-----
Confidence 988 3 3 388999999999987 467776 6654 458999866999999999999998 88888888643
Q ss_pred HhcCHHHHHHHHHHHHHHHhh
Q 039338 466 SMFTANKMALAYERLFLCIKN 486 (493)
Q Consensus 466 ~~fs~~~~~~~~~~~~~~i~~ 486 (493)
..|.+...++++.+++.++++
T Consensus 346 ~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 346 NPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp CSSCCSCHHHHHHHHHHHHTT
T ss_pred CCCCCChHHHHHHHHHHHHhc
Confidence 336666667777777776654
No 25
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.95 E-value=7.8e-27 Score=200.82 Aligned_cols=158 Identities=20% Similarity=0.362 Sum_probs=133.4
Q ss_pred cEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh----cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338 311 SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF----GHQVLVMGSMSPAELRAFYNAIDIFV 386 (493)
Q Consensus 311 ~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l----~~~V~~~g~~~~~~~~~~~~~adv~v 386 (493)
+++|+|+||+.+.||++.+++++..+++. ++++|+++|+|+..+.++++ +.+|.+ |+++++++.++|+.||++|
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v 79 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYK-QDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV 79 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTG-GGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccC-CCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence 47899999999999999999999998543 79999999999877666554 358889 9999999999999999999
Q ss_pred eCCCCCCCCChHHHHHHHcCC-cEEec-CCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338 387 NPTLRPQGLDLTLMEAMMSGK-PVMAS-RFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQY 463 (493)
Q Consensus 387 ~ps~~~eg~~~~~~EAm~~G~-PvI~s-~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~ 463 (493)
+||. .|++|++++|||++|+ |||++ +.++.. +++.++.+ ++++ |+++++++|.+++++ ++.+++++++++++
T Consensus 80 ~ps~-~e~~~~~~~Eama~G~vPvi~~~~~~~~~-~~~~~~~~--~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~ 154 (166)
T 3qhp_A 80 HAAN-VESEAIACLEAISVGIVPVIANSPLSATR-QFALDERS--LFEPNNAKDLSAKIDWWLEN-KLERERMQNEYAKS 154 (166)
T ss_dssp ECCC-SCCCCHHHHHHHHTTCCEEEECCTTCGGG-GGCSSGGG--EECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred ECCc-ccCccHHHHHHHhcCCCcEEeeCCCCchh-hhccCCce--EEcCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 9996 5999999999999998 99994 567776 77776644 7777 999999999999998 99999999999999
Q ss_pred HHHhcCHHHHHHH
Q 039338 464 AASMFTANKMALA 476 (493)
Q Consensus 464 ~~~~fs~~~~~~~ 476 (493)
+ ++|+|++++++
T Consensus 155 ~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 155 A-LNYTLENSVIQ 166 (166)
T ss_dssp H-HHHC-------
T ss_pred H-HHCChhhhhcC
Confidence 9 56999998764
No 26
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.94 E-value=1.5e-25 Score=220.47 Aligned_cols=278 Identities=14% Similarity=0.102 Sum_probs=206.5
Q ss_pred CCCcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhc
Q 039338 177 EPFDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFN 251 (493)
Q Consensus 177 ~~~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (493)
..-|+|.+|++. ++.++....| ++.+.+|-+++. +.++..+. ..+...+. +.+-
T Consensus 148 ~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs---~e~f~~Lp------------~~~r~ell------~gll 206 (496)
T 3t5t_A 148 SADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPS---ADYWRILP------------KEIRTGIL------HGML 206 (496)
T ss_dssp CSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCC---HHHHTTSC------------HHHHHHHH------HHHT
T ss_pred CCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCC---HHHHhhCc------------HhHHHHHH------HHHH
Confidence 357899999874 3455544333 388888876432 22222210 00112221 3456
Q ss_pred cCCeEEEcChhHHHHHHH----Hh-CCC-------------CCcEEEecCCccCCCccCCcc-cchhhhhhhCCCCCCcE
Q 039338 252 KYAHHVAISDSCGEMLRD----VY-QIP-------------SERVHVILNGINENEYGVDLS-LGQSFRSRIGIPKNASL 312 (493)
Q Consensus 252 ~~d~ii~~S~~~~~~~~~----~~-~~~-------------~~~v~vi~ngvd~~~~~~~~~-~~~~~r~~~~i~~~~~~ 312 (493)
.+|.|.+.+......+.+ .. |.+ ..++.++|+|||.+.|.+... ....+|++++ ++ .
T Consensus 207 ~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~---~~-~ 282 (496)
T 3t5t_A 207 PATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD---GH-R 282 (496)
T ss_dssp TSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---TS-E
T ss_pred hCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---Cc-e
Confidence 899999999987776543 23 321 136789999999998876542 2356778876 33 6
Q ss_pred EEEEecccccccChHHHHHHHHHHHhhCCC---eEEEEEeC-----CCcH----HHHhhhc---------CcEEEecCCC
Q 039338 313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPD---VYLIVAGS-----GPWE----QRYKDFG---------HQVLVMGSMS 371 (493)
Q Consensus 313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~---~~l~i~G~-----g~~~----~~~~~l~---------~~V~~~g~~~ 371 (493)
+|+++||+++.||++.+++|+ ++.+++|+ +.|+++|. ++.. +.++++. ..|.|+|.++
T Consensus 283 lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~ 361 (496)
T 3t5t_A 283 LVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDND 361 (496)
T ss_dssp EEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred EEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCC
Confidence 778999999999999999999 88888875 56887763 2222 2233331 1699999999
Q ss_pred HHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcC---CcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHH
Q 039338 372 PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSG---KPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVS 447 (493)
Q Consensus 372 ~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G---~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~ 447 (493)
.+++..+|+.||++|+||.+ ||||++.+|||+|| .|+|+|+.+|.. +.+ +.+|++++| |+++++++|.+++.
T Consensus 362 ~~el~aly~~ADv~vv~Slr-EGfgLv~~EamA~~~~~g~lVlSe~aGa~-~~l--~~~allVnP~D~~~lA~AI~~aL~ 437 (496)
T 3t5t_A 362 VNHTIACFRRADLLIFNSTV-DGQNLSTFEAPLVNERDADVILSETCGAA-EVL--GEYCRSVNPFDLVEQAEAISAALA 437 (496)
T ss_dssp HHHHHHHHHHCSEEEECCSS-BSCCSHHHHHHHHCSSCCEEEEETTBTTH-HHH--GGGSEEECTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccEEEECccc-ccCChhHHHHHHhCCCCCCEEEeCCCCCH-HHh--CCCEEEECCCCHHHHHHHHHHHHc
Confidence 99999999999999999987 99999999999997 899999999888 444 347999999 99999999999999
Q ss_pred cCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338 448 EGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIK 485 (493)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~ 485 (493)
+++++++++.++.++++.+ ++....++.+++-+....
T Consensus 438 m~~~er~~r~~~~~~~V~~-~d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 438 AGPRQRAEAAARRRDAARP-WTLEAWVQAQLDGLAADH 474 (496)
T ss_dssp CCHHHHHHHHHHHHHHHTT-CBHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHhhcc
Confidence 9778899999999999977 899999999988887653
No 27
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.93 E-value=5.3e-26 Score=221.47 Aligned_cols=304 Identities=13% Similarity=0.072 Sum_probs=204.3
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS 164 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (493)
+|.+.+. ..|..+.+..|+++|.++| +|.+.+..... ...... ...+....... + +
T Consensus 42 ~iwih~~-------s~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~--~~~~~~------~~~~v~~~~~~---p--~--- 97 (374)
T 2xci_A 42 ALWVHTA-------SIGEFNTFLPILKELKREH-RILLTYFSPRA--REYLKT------KSDFYDCLHPL---P--L--- 97 (374)
T ss_dssp CEEEECS-------SHHHHHHHHHHHHHHHHHS-CEEEEESCGGG--HHHHHT------TGGGCSEEEEC---C--C---
T ss_pred CEEEEcC-------CHHHHHHHHHHHHHHHhcC-CEEEEEcCCcH--HHHHHH------hcccccceeEC---C--C---
Confidence 4766653 3577888999999999998 88766654322 100000 00011100111 1 1
Q ss_pred cchHHHHHHhcCCCCcEEEeCccc-hhHHh--hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHH
Q 039338 165 KGWEQFDEENQREPFDVVHSESVA-LPHWL--ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVML 241 (493)
Q Consensus 165 ~~~~~~~~~~~~~~~DiI~~~~~~-~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (493)
.....+.+.+++.+||+||++... .+..+ ... | ++...+.... .. +
T Consensus 98 ~~~~~l~~~l~~~~pDiv~~~~~~~~~~~~~~~~~-p-~~~~~~~~~~------------------------~~----~- 146 (374)
T 2xci_A 98 DNPFSVKRFEELSKPKALIVVEREFWPSLIIFTKV-P-KILVNAYAKG------------------------SL----I- 146 (374)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESCCCCHHHHHHCCS-C-EEEEEECCCC------------------------CH----H-
T ss_pred CCHHHHHHHHHHhCCCEEEEECccCcHHHHHHHhC-C-EEEEEeecCc------------------------hH----H-
Confidence 123456666667789999875332 11111 122 5 5443332100 01 1
Q ss_pred HHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccc
Q 039338 242 KVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLV 321 (493)
Q Consensus 242 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~ 321 (493)
.+.+++++|.++++|+..++.+.+ +|++ ++.+++|+. |....... .. + .. .++++.|+
T Consensus 147 ----~~~~~~~~d~ii~~S~~~~~~l~~-~g~~--ki~vi~n~~----f~~~~~~~----~~--l--~~-~vi~~~~~-- 204 (374)
T 2xci_A 147 ----EKILSKKFDLIIMRTQEDVEKFKT-FGAK--RVFSCGNLK----FICQKGKG----IK--L--KG-EFIVAGSI-- 204 (374)
T ss_dssp ----HHHHHTTCSEEEESCHHHHHHHHT-TTCC--SEEECCCGG----GCCCCCSC----CC--C--SS-CEEEEEEE--
T ss_pred ----HHHHHHhCCEEEECCHHHHHHHHH-cCCC--eEEEcCCCc----cCCCcChh----hh--h--cC-CEEEEEeC--
Confidence 125578899999999999999988 5776 899999973 21111100 11 1 11 34556664
Q ss_pred cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH-HHHhhh----c----------CcEEEecCCCHHHHHHHHHHcCEEE
Q 039338 322 KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE-QRYKDF----G----------HQVLVMGSMSPAELRAFYNAIDIFV 386 (493)
Q Consensus 322 ~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~-~~~~~l----~----------~~V~~~g~~~~~~~~~~~~~adv~v 386 (493)
..||.+.+++|++.+.++.|+++|+|+|+|+.+ +.++++ + .+|.+.|+. +|+..+|+.||+++
T Consensus 205 ~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~v 282 (374)
T 2xci_A 205 HTGEVEIILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAI 282 (374)
T ss_dssp CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEE
T ss_pred CCchHHHHHHHHHHHHhhCCCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEE
Confidence 468999999999999988899999999998865 344432 2 257788876 79999999999988
Q ss_pred eCCCCCCCCChHHHHHHHcCCcEEec-CCCCCccceeeeC-cceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338 387 NPTLRPQGLDLTLMEAMMSGKPVMAS-RFPSIKGTIVVDD-EFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQY 463 (493)
Q Consensus 387 ~ps~~~eg~~~~~~EAm~~G~PvI~s-~~~~~~~e~v~~~-~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~ 463 (493)
+|+...|++|++++|||+||+|||++ +.++.+ |++.+. .+|+++++ |+++|+++|.++++| +.+++|+++++++
T Consensus 283 l~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~-e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~mg~~ar~~ 359 (374)
T 2xci_A 283 VGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVN-DLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKVEEKSREI 359 (374)
T ss_dssp ECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSH-HHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCHHHHHHHH
T ss_pred ECCcccCCCCcCHHHHHHhCCCEEECCCccChH-HHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHHHHHHHHH
Confidence 87654467889999999999999975 677877 766552 46888888 999999999999986 6788999999999
Q ss_pred HHHhcCH
Q 039338 464 AASMFTA 470 (493)
Q Consensus 464 ~~~~fs~ 470 (493)
+++++..
T Consensus 360 ~~~~~ga 366 (374)
T 2xci_A 360 KGCYLEK 366 (374)
T ss_dssp HHHHHHH
T ss_pred HHhcccH
Confidence 9876443
No 28
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.92 E-value=1.2e-22 Score=193.27 Aligned_cols=240 Identities=12% Similarity=0.031 Sum_probs=172.5
Q ss_pred CCCCcEEEeCccch-----hH-Hhhh----ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHH
Q 039338 176 REPFDVVHSESVAL-----PH-WLAR----NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLN 245 (493)
Q Consensus 176 ~~~~DiI~~~~~~~-----~~-~~~~----~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (493)
-.++|+|+++++.+ .. ++.+ +.| ++..+||+++..... .... ...
T Consensus 72 ~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k-~i~~ihDl~pl~~~~-------------------~~~~-----~~~ 126 (339)
T 3rhz_A 72 LRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIK-IVLFIHDVVPLMFSG-------------------NFYL-----MDR 126 (339)
T ss_dssp CCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCE-EEEEESCCHHHHCGG-------------------GGGG-----HHH
T ss_pred CCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCE-EEEEecccHHhhCcc-------------------chhh-----HHH
Confidence 45799999987643 11 1221 345 999999987643211 0000 013
Q ss_pred HHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccC
Q 039338 246 EIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKG 325 (493)
Q Consensus 246 ~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg 325 (493)
|+.+++++|.|+++|+.+++.+.+ +|++..++.++++. |... +.+ ...+ ..+++|+|+|+++....
T Consensus 127 E~~~y~~aD~Ii~~S~~~~~~l~~-~G~~~~ki~~~~~~-~~~~--~~~---------~~~~-~~~~~i~yaG~l~k~~~ 192 (339)
T 3rhz_A 127 TIAYYNKADVVVAPSQKMIDKLRD-FGMNVSKTVVQGMW-DHPT--QAP---------MFPA-GLKREIHFPGNPERFSF 192 (339)
T ss_dssp HHHHHTTCSEEEESCHHHHHHHHH-TTCCCSEEEECCSC-CCCC--CCC---------CCCC-EEEEEEEECSCTTTCGG
T ss_pred HHHHHHHCCEEEECCHHHHHHHHH-cCCCcCceeecCCC-CccC--ccc---------cccc-CCCcEEEEeCCcchhhH
Confidence 568899999999999999999988 68876777655442 2110 000 0112 22378899999985322
Q ss_pred hHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCC------CCCCChHH
Q 039338 326 HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLR------PQGLDLTL 399 (493)
Q Consensus 326 ~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~------~eg~~~~~ 399 (493)
++ .+ .++++|+++|+|+.+ ++. ||.|+|++|++++..+++++|+.++.... ..++|.++
T Consensus 193 L~-------~l---~~~~~f~ivG~G~~~----~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl 257 (339)
T 3rhz_A 193 VK-------EW---KYDIPLKVYTWQNVE----LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKL 257 (339)
T ss_dssp GG-------GC---CCSSCEEEEESCCCC----CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHH
T ss_pred HH-------hC---CCCCeEEEEeCCccc----CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHH
Confidence 21 11 378999999999875 354 99999999999999999999998875210 13579999
Q ss_pred HHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHH
Q 039338 400 MEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMAL 475 (493)
Q Consensus 400 ~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 475 (493)
+||||+|+|||+++.++.. +++.++++|+.++ +.++++++|.++. ++.+++|++++++.+++ +++..+.+
T Consensus 258 ~eymA~G~PVI~~~~~~~~-~~v~~~~~G~~~~-~~~e~~~~i~~l~---~~~~~~m~~na~~~a~~-~~~~~f~k 327 (339)
T 3rhz_A 258 GSFLAAGIPVIVQEGIANQ-ELIENNGLGWIVK-DVEEAIMKVKNVN---EDEYIELVKNVRSFNPI-LRKGFFTR 327 (339)
T ss_dssp HHHHHHTCCEEEETTCTTT-HHHHHHTCEEEES-SHHHHHHHHHHCC---HHHHHHHHHHHHHHTHH-HHTTHHHH
T ss_pred HHHHHcCCCEEEccChhHH-HHHHhCCeEEEeC-CHHHHHHHHHHhC---HHHHHHHHHHHHHHHHH-hhccHHHH
Confidence 9999999999999999988 9999999999998 7888998888762 56789999999988665 44444433
No 29
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.92 E-value=1.4e-24 Score=188.52 Aligned_cols=146 Identities=23% Similarity=0.270 Sum_probs=124.9
Q ss_pred CCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh--------hcCcEEEecCCCHHHHH
Q 039338 305 GIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD--------FGHQVLVMGSMSPAELR 376 (493)
Q Consensus 305 ~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~--------l~~~V~~~g~~~~~~~~ 376 (493)
.++.++ .+|+|+|++.+.||++.+++++..+ ++++|+++|.++..+.+++ +.++|.|+|+++++++.
T Consensus 18 ~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~ 92 (177)
T 2f9f_A 18 KFKCYG-DFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELI 92 (177)
T ss_dssp CCCCCC-SCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHH
T ss_pred ccCCCC-CEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHH
Confidence 345555 5678999999999999999999988 5889999998876443332 23699999999999999
Q ss_pred HHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHH-HH
Q 039338 377 AFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMR-LA 454 (493)
Q Consensus 377 ~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~-~~ 454 (493)
++|+.||++|+|+. .|++|++++|||++|+|||+++.++.. +++.++.+|+++ + |+++++++|.+++++ ++. ++
T Consensus 93 ~~~~~adi~v~ps~-~e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~~~g~~~-~~d~~~l~~~i~~l~~~-~~~~~~ 168 (177)
T 2f9f_A 93 DLYSRCKGLLCTAK-DEDFGLTPIEAMASGKPVIAVNEGGFK-ETVINEKTGYLV-NADVNEIIDAMKKVSKN-PDKFKK 168 (177)
T ss_dssp HHHHHCSEEEECCS-SCCSCHHHHHHHHTTCCEEEESSHHHH-HHCCBTTTEEEE-CSCHHHHHHHHHHHHHC-TTTTHH
T ss_pred HHHHhCCEEEeCCC-cCCCChHHHHHHHcCCcEEEeCCCCHH-HHhcCCCccEEe-CCCHHHHHHHHHHHHhC-HHHHHH
Confidence 99999999999996 599999999999999999999999888 889999999999 6 999999999999999 554 44
Q ss_pred HHHHH
Q 039338 455 QRGEA 459 (493)
Q Consensus 455 ~~~~~ 459 (493)
+++++
T Consensus 169 ~~~~~ 173 (177)
T 2f9f_A 169 DCFRR 173 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.91 E-value=7.8e-24 Score=207.51 Aligned_cols=334 Identities=13% Similarity=0.069 Sum_probs=216.8
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD 159 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (493)
++.|||++|+..- .|.. .+..++++|.++ |+++.++.+.... +-..+..+. ... .+.........+
T Consensus 23 ~~m~ki~~v~Gtr------~~~~-~~a~li~~l~~~~~~~~~~~~tG~h~--~~~~~~~~~---~~i-~~~~~l~~~~~~ 89 (396)
T 3dzc_A 23 NAMKKVLIVFGTR------PEAI-KMAPLVQQLCQDNRFVAKVCVTGQHR--EMLDQVLEL---FSI-TPDFDLNIMEPG 89 (396)
T ss_dssp -CCEEEEEEECSH------HHHH-HHHHHHHHHHHCTTEEEEEEECCSSS--HHHHHHHHH---TTC-CCSEECCCCCTT
T ss_pred CCCCeEEEEEecc------HhHH-HHHHHHHHHHhCCCCcEEEEEecccH--HHHHHHHHh---cCC-CCceeeecCCCC
Confidence 4457999999742 3433 357899999987 7898876665442 100000000 011 011111110011
Q ss_pred ---ccccccchHHHHHHhcCCCCcEEEeCccc---hh---HHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccch
Q 039338 160 ---KWRYSKGWEQFDEENQREPFDVVHSESVA---LP---HWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSL 230 (493)
Q Consensus 160 ---~~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (493)
..........+.+.+++.+||+|++++.. ++ +....++| ++...++..... ++
T Consensus 90 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IP-v~h~~ag~rs~~----~~------------- 151 (396)
T 3dzc_A 90 QTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIP-VGHVEAGLRTGN----IY------------- 151 (396)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCC-EEEETCCCCCSC----TT-------------
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCC-EEEEECCccccc----cc-------------
Confidence 11223455667777788899999998642 22 22234567 654444321100 00
Q ss_pred HhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCCccCCcc-c----chhhhhhh
Q 039338 231 AFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENEYGVDLS-L----GQSFRSRI 304 (493)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~~~~~~~-~----~~~~r~~~ 304 (493)
..+.....+. ...+.+|.+++.|+..++.+.+ .|++++++.+++|++ |...+.+... . ...+++++
T Consensus 152 ---~~~~~~~~r~----~~~~~a~~~~~~se~~~~~l~~-~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~l 223 (396)
T 3dzc_A 152 ---SPWPEEGNRK----LTAALTQYHFAPTDTSRANLLQ-ENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQF 223 (396)
T ss_dssp ---SSTTHHHHHH----HHHHTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTC
T ss_pred ---cCCcHHHHHH----HHHHhcCEEECCCHHHHHHHHH-cCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHh
Confidence 0000111111 1134689999999999999987 699888999999854 4322221110 0 25677889
Q ss_pred C-CCCCCcEEEEEeccccc-ccChHHHHHHHHHHHhhCCCeEEEEE-eCCC-cHHHHhhh---cCcEEEecCCCHHHHHH
Q 039338 305 G-IPKNASLVLGVAGRLVK-DKGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-WEQRYKDF---GHQVLVMGSMSPAELRA 377 (493)
Q Consensus 305 ~-i~~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-~~~~~~~l---~~~V~~~g~~~~~~~~~ 377 (493)
| ++.++++++++.+|... .|+++.+++|+..+.+++|++++++. |.++ .++.++++ .++|.+.++++..++..
T Consensus 224 g~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~ 303 (396)
T 3dzc_A 224 PMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVY 303 (396)
T ss_dssp TTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHH
T ss_pred CccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHH
Confidence 8 56666677767766543 47899999999999988889999885 5543 34455543 27899999999889999
Q ss_pred HHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEec-CCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHH
Q 039338 378 FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS-RFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQR 456 (493)
Q Consensus 378 ~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s-~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~ 456 (493)
+|+.||++|.+| | | ..+|||++|+|+|++ +.++.+ |++.++ .+++++.|++++++++.++++| ++.+++|
T Consensus 304 l~~~ad~vv~~S----G-g-~~~EA~a~G~PvV~~~~~~~~~-e~v~~G-~~~lv~~d~~~l~~ai~~ll~d-~~~~~~m 374 (396)
T 3dzc_A 304 LMDRAHIILTDS----G-G-IQEEAPSLGKPVLVMRETTERP-EAVAAG-TVKLVGTNQQQICDALSLLLTD-PQAYQAM 374 (396)
T ss_dssp HHHHCSEEEESC----S-G-GGTTGGGGTCCEEECCSSCSCH-HHHHHT-SEEECTTCHHHHHHHHHHHHHC-HHHHHHH
T ss_pred HHHhcCEEEECC----c-c-HHHHHHHcCCCEEEccCCCcch-HHHHcC-ceEEcCCCHHHHHHHHHHHHcC-HHHHHHH
Confidence 999999999887 2 3 348999999999998 666666 777666 5777766899999999999999 8888888
Q ss_pred HHHHHH
Q 039338 457 GEACRQ 462 (493)
Q Consensus 457 ~~~~~~ 462 (493)
++++..
T Consensus 375 ~~~~~~ 380 (396)
T 3dzc_A 375 SQAHNP 380 (396)
T ss_dssp HTSCCT
T ss_pred hhccCC
Confidence 877644
No 31
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.91 E-value=1.5e-23 Score=207.91 Aligned_cols=341 Identities=13% Similarity=0.021 Sum_probs=218.5
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeec----
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHE---- 155 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 155 (493)
...+|||++++. ..+|....+..|+++|+++||+|++++..... . .... .+...+.+..
T Consensus 17 ~~~~MrIl~~~~------~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~--~-~~~~--------~g~~~~~~~~~~~~ 79 (412)
T 3otg_A 17 EGRHMRVLFASL------GTHGHTYPLLPLATAARAAGHEVTFATGEGFA--G-TLRK--------LGFEPVATGMPVFD 79 (412)
T ss_dssp -CCSCEEEEECC------SSHHHHGGGHHHHHHHHHTTCEEEEEECGGGH--H-HHHH--------TTCEEEECCCCHHH
T ss_pred ccceeEEEEEcC------CCcccHHHHHHHHHHHHHCCCEEEEEccHHHH--H-HHHh--------cCCceeecCccccc
Confidence 456799999985 34777777889999999999999999975311 0 0000 0111111100
Q ss_pred ----------------------CCCCccccccc------hHHHHHHhcCCCCcEEEeCccchhHH---hhhccCcEEEEe
Q 039338 156 ----------------------GEADKWRYSKG------WEQFDEENQREPFDVVHSESVALPHW---LARNVTNLAVSW 204 (493)
Q Consensus 156 ----------------------~~~~~~~~~~~------~~~~~~~~~~~~~DiI~~~~~~~~~~---~~~~~p~~v~~~ 204 (493)
........... ...+.+.+++.+||+|+++...+... ...++| ++.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP-~v~~~ 158 (412)
T 3otg_A 80 GFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIP-TICHG 158 (412)
T ss_dssp HHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCC-EEEEC
T ss_pred chhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCC-EEEec
Confidence 00000111111 25566667788999999886543322 234678 88888
Q ss_pred ccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHH-------HhhccCCeEEEcChhHHHHHHHHhCCCCCc
Q 039338 205 HGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEI-------RFFNKYAHHVAISDSCGEMLRDVYQIPSER 277 (493)
Q Consensus 205 h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~ 277 (493)
|+...... ....+...+.+..... ..+..+|.+++.++...+...+..... .
T Consensus 159 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~--~ 217 (412)
T 3otg_A 159 VGRDTPDD-------------------LTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPR--R 217 (412)
T ss_dssp CSCCCCSH-------------------HHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTT--E
T ss_pred ccccCchh-------------------hhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCC--c
Confidence 87532110 0112222222222110 112467888998887766655433211 1
Q ss_pred EEEecCCccCCCccCCcccchhhhhhh--CCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCC-CcH
Q 039338 278 VHVILNGINENEYGVDLSLGQSFRSRI--GIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSG-PWE 354 (493)
Q Consensus 278 v~vi~ngvd~~~~~~~~~~~~~~r~~~--~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g-~~~ 354 (493)
..+.+.+.+. . . . +.++ ..++++++++++.|++. .++.+.+.+++..+.+. ++++++++.+ ...
T Consensus 218 ~~~~~~~~~~-----~-~---~-~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~~ 284 (412)
T 3otg_A 218 HELRPVPFAE-----Q-G---D-LPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLDV 284 (412)
T ss_dssp EECCCCCCCC-----C-C---C-CCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCCC
T ss_pred ceeeccCCCC-----C-C---C-CCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCCh
Confidence 1111111110 0 0 0 1112 22345568888999986 67888888888777653 5666666544 335
Q ss_pred HHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEE
Q 039338 355 QRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFM 430 (493)
Q Consensus 355 ~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~ 430 (493)
+.++++.++|.+.|++ ++.++|+.||++|.++ .+.+++|||++|+|+|+.+.++ .. +.+.+.+.|++
T Consensus 285 ~~l~~~~~~v~~~~~~---~~~~~l~~ad~~v~~~-----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~-~~v~~~g~g~~ 355 (412)
T 3otg_A 285 SGLGEVPANVRLESWV---PQAALLPHVDLVVHHG-----GSGTTLGALGAGVPQLSFPWAGDSFANA-QAVAQAGAGDH 355 (412)
T ss_dssp TTCCCCCTTEEEESCC---CHHHHGGGCSEEEESC-----CHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEE
T ss_pred hhhccCCCcEEEeCCC---CHHHHHhcCcEEEECC-----chHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHcCCEEe
Confidence 5555667899999999 4889999999999654 2479999999999999987654 33 56777889999
Q ss_pred ECC---CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 039338 431 FAP---NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLC 483 (493)
Q Consensus 431 ~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 483 (493)
+++ |+++|+++|.++++| ++.+++|++.+++.... ++++++++.+++++.+
T Consensus 356 ~~~~~~~~~~l~~ai~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 356 LLPDNISPDSVSGAAKRLLAE-ESYRAGARAVAAEIAAM-PGPDEVVRLLPGFASR 409 (412)
T ss_dssp CCGGGCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHS-CCHHHHHTTHHHHHC-
T ss_pred cCcccCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHhcc
Confidence 986 789999999999999 89999999999888776 7999999999988754
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.91 E-value=7.7e-24 Score=207.77 Aligned_cols=350 Identities=14% Similarity=0.084 Sum_probs=218.8
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeec--
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHE-- 155 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 155 (493)
.|++|||++|+.. ..+... +..+.++|.++ |+++.++.+.... +-..+..+. ... .+......
T Consensus 24 ~m~~~kI~~v~Gt------r~~~~~-~a~li~~l~~~~~~~~~~~~~tG~h~--~m~~~~~~~---~~i-~~~~~l~v~~ 90 (403)
T 3ot5_A 24 AMAKIKVMSIFGT------RPEAIK-MAPLVLALEKEPETFESTVVITAQHR--EMLDQVLEI---FDI-KPDIDLDIMK 90 (403)
T ss_dssp --CCEEEEEEECS------HHHHHH-HHHHHHHHHTCTTTEEEEEEECC-------CHHHHHH---TTC-CCSEECCCCC
T ss_pred ccccceEEEEEec------ChhHHH-HHHHHHHHHhCCCCCcEEEEEecCcH--HHHHHHHHh---cCC-CCCcccccCC
Confidence 3556899999973 234443 58899999987 6898877665442 110111111 011 01111111
Q ss_pred CCCCc-cccccchHHHHHHhcCCCCcEEEeCccc---hh---HHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCcc
Q 039338 156 GEADK-WRYSKGWEQFDEENQREPFDVVHSESVA---LP---HWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPM 228 (493)
Q Consensus 156 ~~~~~-~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ 228 (493)
..... .........+.+.+++.+||+|++++.. ++ +....++| ++....+..... .+. +
T Consensus 91 ~~~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IP-v~h~~aglrs~~----~~~--------~- 156 (403)
T 3ot5_A 91 KGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKM-LGHVEAGLRTWN----KYS--------P- 156 (403)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCE-EEEESCCCCCSC----TTS--------S-
T ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCC-EEEEECCccccc----ccc--------C-
Confidence 01011 1123455667777788899999998642 22 22234566 554333320000 000 0
Q ss_pred chHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCC-ccCCCccCCcccchhhhhhhCCC
Q 039338 229 SLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNG-INENEYGVDLSLGQSFRSRIGIP 307 (493)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~ 307 (493)
.......+ ..-+.+|.+++.|+..++.+.+ .|++++++.+++|+ +|...+..........++++
T Consensus 157 ------~p~~~~r~-----~~~~~a~~~~~~se~~~~~l~~-~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l--- 221 (403)
T 3ot5_A 157 ------FPEEMNRQ-----LTGVMADIHFSPTKQAKENLLA-EGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL--- 221 (403)
T ss_dssp ------TTHHHHHH-----HHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---
T ss_pred ------CcHHHHHH-----HHHHhcCEEECCCHHHHHHHHH-cCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc---
Confidence 00011111 1223478999999999999988 68988999999985 55433322222122444544
Q ss_pred CCCcEEEEEeccccc-ccChHHHHHHHHHHHhhCCCeEEEEE-eCCC-cHHHHhh-hc--CcEEEecCCCHHHHHHHHHH
Q 039338 308 KNASLVLGVAGRLVK-DKGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-WEQRYKD-FG--HQVLVMGSMSPAELRAFYNA 381 (493)
Q Consensus 308 ~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-~~~~~~~-l~--~~V~~~g~~~~~~~~~~~~~ 381 (493)
.++++++++.||... .|+++.+++++..+.++++++++++. |.++ .++.+++ +. ++|.+.|++++.++..+|+.
T Consensus 222 ~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ 301 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRK 301 (403)
T ss_dssp TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHH
T ss_pred cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHh
Confidence 344577777777643 47789999999999988899999887 4443 2444444 22 78999999999999999999
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHcCCcEEec-CCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHH
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS-RFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEAC 460 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s-~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~ 460 (493)
||++|.+| |...+||+++|+|+|++ +.++.. |.+..+ +|++++.|++++++++.+++++ ++.+++|++++
T Consensus 302 ad~vv~~S------Gg~~~EA~a~g~PvV~~~~~~~~~-e~v~~g-~~~lv~~d~~~l~~ai~~ll~~-~~~~~~m~~~~ 372 (403)
T 3ot5_A 302 SYLVFTDS------GGVQEEAPGMGVPVLVLRDTTERP-EGIEAG-TLKLIGTNKENLIKEALDLLDN-KESHDKMAQAA 372 (403)
T ss_dssp EEEEEECC------HHHHHHGGGTTCCEEECCSSCSCH-HHHHHT-SEEECCSCHHHHHHHHHHHHHC-HHHHHHHHHSC
T ss_pred cCEEEECC------ccHHHHHHHhCCCEEEecCCCcch-hheeCC-cEEEcCCCHHHHHHHHHHHHcC-HHHHHHHHhhc
Confidence 99999776 23448999999999998 566665 666544 8888877999999999999999 88888888765
Q ss_pred HHHHHHhcCHHHHHHHHHHHH
Q 039338 461 RQYAASMFTANKMALAYERLF 481 (493)
Q Consensus 461 ~~~~~~~fs~~~~~~~~~~~~ 481 (493)
..+... .+.+++++.+.+.+
T Consensus 373 ~~~g~~-~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 373 NPYGDG-FAANRILAAIKSHF 392 (403)
T ss_dssp CTTCCS-CHHHHHHHHHHHHH
T ss_pred CcccCC-cHHHHHHHHHHHHh
Confidence 544222 34555555554443
No 33
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.88 E-value=3.5e-21 Score=186.73 Aligned_cols=327 Identities=16% Similarity=0.116 Sum_probs=204.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-----
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE----- 157 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 157 (493)
+.||++.+. ..||.-.-+..++++|.++||+|++++....- +. +.. ...+..++.+...
T Consensus 2 ~~~i~i~~G------GTgGHi~palala~~L~~~g~~V~~vg~~~g~--e~--~~v------~~~g~~~~~i~~~~~~~~ 65 (365)
T 3s2u_A 2 KGNVLIMAG------GTGGHVFPALACAREFQARGYAVHWLGTPRGI--EN--DLV------PKAGLPLHLIQVSGLRGK 65 (365)
T ss_dssp -CEEEEECC------SSHHHHHHHHHHHHHHHHTTCEEEEEECSSST--HH--HHT------GGGTCCEEECC-------
T ss_pred CCcEEEEcC------CCHHHHHHHHHHHHHHHhCCCEEEEEECCchH--hh--chh------hhcCCcEEEEECCCcCCC
Confidence 347887763 55787777899999999999999999865432 10 000 0011111111110
Q ss_pred ------CCccccccchHHHHHHhcCCCCcEEEeCccc--hhH---HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCC
Q 039338 158 ------ADKWRYSKGWEQFDEENQREPFDVVHSESVA--LPH---WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLE 226 (493)
Q Consensus 158 ------~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~ 226 (493)
...+..........+++++.+||+|+.++.. .+. ....++| +++.-.+... +
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP-~vihe~n~~~---------------G- 128 (365)
T 3s2u_A 66 GLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVP-LVIHEQNAVA---------------G- 128 (365)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCC-EEEEECSSSC---------------C-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCC-EEEEecchhh---------------h-
Confidence 0111222333455566778899999987542 222 2334567 5543222110 0
Q ss_pred ccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCC
Q 039338 227 PMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGI 306 (493)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i 306 (493)
. ..+ .+.+.++.+....+.. + ...+++.++.|++..+.+... +...++
T Consensus 129 --------~----~nr-----~l~~~a~~v~~~~~~~-------~-~~~~k~~~~g~pvr~~~~~~~-------~~~~~~ 176 (365)
T 3s2u_A 129 --------T----ANR-----SLAPIARRVCEAFPDT-------F-PASDKRLTTGNPVRGELFLDA-------HARAPL 176 (365)
T ss_dssp --------H----HHH-----HHGGGCSEEEESSTTS-------S-CC---CEECCCCCCGGGCCCT-------TSSCCC
T ss_pred --------h----HHH-----hhccccceeeeccccc-------c-cCcCcEEEECCCCchhhccch-------hhhccc
Confidence 0 011 2234567776654432 2 134577788888876654322 233455
Q ss_pred CCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEE-EEEeCCCcH---HHHhhhcCcEEEecCCCHHHHHHHHHHc
Q 039338 307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYL-IVAGSGPWE---QRYKDFGHQVLVMGSMSPAELRAFYNAI 382 (493)
Q Consensus 307 ~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~---~~~~~l~~~V~~~g~~~~~~~~~~~~~a 382 (493)
+++++.++++.|+....+..+.+.+++..+..+. ++++ +++|.+... +.++++..++.+.+++ +++.++|++|
T Consensus 177 ~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~-~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~--~dm~~~l~~a 253 (365)
T 3s2u_A 177 TGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEI-RPAIRHQAGRQHAEITAERYRTVAVEADVAPFI--SDMAAAYAWA 253 (365)
T ss_dssp TTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTTT-CCEEEEECCTTTHHHHHHHHHHTTCCCEEESCC--SCHHHHHHHC
T ss_pred CCCCcEEEEECCcCCccccchhhHHHHHhccccc-ceEEEEecCccccccccceecccccccccccch--hhhhhhhccc
Confidence 6667677778888888888888899998886553 3444 445654332 2344455789999999 6899999999
Q ss_pred CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc-------ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHH
Q 039338 383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG-------TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMR 452 (493)
Q Consensus 383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~-------e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~ 452 (493)
|++|.- .| ++|+.|+|++|+|+|..+.+...+ +.+.+.+.|++++. ++++|+++|.++++| ++.
T Consensus 254 DlvI~r----aG-~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d-~~~ 327 (365)
T 3s2u_A 254 DLVICR----AG-ALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMH-PET 327 (365)
T ss_dssp SEEEEC----CC-HHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC-THH
T ss_pred eEEEec----CC-cchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCC-HHH
Confidence 999952 23 689999999999999887654321 24566678998875 689999999999999 999
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 039338 453 LAQRGEACRQYAASMFTANKMALAYERLFLCI 484 (493)
Q Consensus 453 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i 484 (493)
+++|++++++.... ...+++++.++++.+.+
T Consensus 328 ~~~m~~~a~~~~~~-~aa~~ia~~i~~larG~ 358 (365)
T 3s2u_A 328 LRSMADQARSLAKP-EATRTVVDACLEVARGL 358 (365)
T ss_dssp HHHHHHHHHHTCCT-THHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhcCCc-cHHHHHHHHHHHHHccc
Confidence 99999999987655 36677777777665544
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.87 E-value=5.9e-21 Score=190.21 Aligned_cols=353 Identities=14% Similarity=0.091 Sum_probs=207.2
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC----
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE---- 157 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 157 (493)
..|||++++. ..+|....+..|+++|.++||+|++++..... .. ... .+...+.+....
T Consensus 6 ~m~kIl~~~~------~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~--~~-~~~--------~g~~~~~~~~~~~~~~ 68 (430)
T 2iyf_A 6 TPAHIAMFSI------AAHGHVNPSLEVIRELVARGHRVTYAIPPVFA--DK-VAA--------TGPRPVLYHSTLPGPD 68 (430)
T ss_dssp --CEEEEECC------SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGH--HH-HHT--------TSCEEEECCCCSCCTT
T ss_pred ccceEEEEeC------CCCccccchHHHHHHHHHCCCeEEEEeCHHHH--HH-HHh--------CCCEEEEcCCcCcccc
Confidence 3479999863 34677778899999999999999999876431 00 000 000001000000
Q ss_pred -------CCccc--------cccchHHHHHHhcCCCCcEEEeCccchhH---HhhhccCcEEEEeccchhhh-hh----h
Q 039338 158 -------ADKWR--------YSKGWEQFDEENQREPFDVVHSESVALPH---WLARNVTNLAVSWHGIALES-LQ----S 214 (493)
Q Consensus 158 -------~~~~~--------~~~~~~~~~~~~~~~~~DiI~~~~~~~~~---~~~~~~p~~v~~~h~~~~~~-~~----~ 214 (493)
..... .......+.+.+++.+||+|+++...... ....++| .+...+...... +. .
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP-~v~~~~~~~~~~~~~~~~~~ 147 (430)
T 2iyf_A 69 ADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVP-AVSLSPNLVAWKGYEEEVAE 147 (430)
T ss_dssp SCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCC-EEEEESSCCCCTTHHHHTHH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCC-EEEEeccccccccccccccc
Confidence 00000 01223445666678899999987543222 2234678 676665542110 00 0
Q ss_pred hhhhhhhcCCCCccchHhHhHHHHHHHHHHHH-------HHhhccCCeEEEcChhHHHHHHHHhCCCCCc-EEEecCCcc
Q 039338 215 GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNE-------IRFFNKYAHHVAISDSCGEMLRDVYQIPSER-VHVILNGIN 286 (493)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~-v~vi~ngvd 286 (493)
..+...... ... ..+...+.+.+.. ..++..++.+++.+....+...+. ++ .+ +..+.++++
T Consensus 148 ~~~~~~~~~------~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~-~~~v~~vG~~~~ 217 (430)
T 2iyf_A 148 PMWREPRQT------ERG-RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADR--VD-EDVYTFVGACQG 217 (430)
T ss_dssp HHHHHHHHS------HHH-HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGG--SC-TTTEEECCCCC-
T ss_pred chhhhhccc------hHH-HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCccc--CC-CccEEEeCCcCC
Confidence 000000000 000 0111112222111 012335788888877654433221 22 34 777776554
Q ss_pred CCCccCCcccchhhhhhhCC-CCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEE-EEEeCCCcHHHHhhhcCcE
Q 039338 287 ENEYGVDLSLGQSFRSRIGI-PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYL-IVAGSGPWEQRYKDFGHQV 364 (493)
Q Consensus 287 ~~~~~~~~~~~~~~r~~~~i-~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~~~~~~l~~~V 364 (493)
...... .+.. .++++++++++|++. .++.+.+.+++..+.+. +++++ +++|+++..+.++++.++|
T Consensus 218 ~~~~~~----------~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~G~~~~~~~l~~~~~~v 285 (430)
T 2iyf_A 218 DRAEEG----------GWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-PGWHLVLQIGRKVTPAELGELPDNV 285 (430)
T ss_dssp ----CC----------CCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-TTEEEEEECC---CGGGGCSCCTTE
T ss_pred CCCCCC----------CCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-CCeEEEEEeCCCCChHHhccCCCCe
Confidence 321000 0111 234457888999998 55555555555555432 46787 5688876655555566899
Q ss_pred EEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHH
Q 039338 365 LVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVES 437 (493)
Q Consensus 365 ~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~ 437 (493)
.+.|++++. ++|+.||++|..+ | +++++|||++|+|+|+.+.++ .. +.+.+.+.|+.++. |+++
T Consensus 286 ~~~~~~~~~---~~l~~ad~~v~~~----G-~~t~~Ea~~~G~P~i~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~ 356 (430)
T 2iyf_A 286 EVHDWVPQL---AILRQADLFVTHA----G-AGGSQEGLATATPMIAVPQAVDQFGNA-DMLQGLGVARKLATEEATADL 356 (430)
T ss_dssp EEESSCCHH---HHHTTCSEEEECC----C-HHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHTTSEEECCCC-CCHHH
T ss_pred EEEecCCHH---HHhhccCEEEECC----C-ccHHHHHHHhCCCEEECCCccchHHHH-HHHHHcCCEEEcCCCCCCHHH
Confidence 999999754 7899999999743 2 379999999999999998754 23 45667788999875 7899
Q ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338 438 LHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIK 485 (493)
Q Consensus 438 l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~ 485 (493)
++++|.++++| ++.++++++.+++.... ++++++++.+++++++..
T Consensus 357 l~~~i~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 357 LRETALALVDD-PEVARRLRRIQAEMAQE-GGTRRAADLIEAELPARH 402 (430)
T ss_dssp HHHHHHHHHHC-HHHHHHHHHHHHHHHHH-CHHHHHHHHHHTTSCC--
T ss_pred HHHHHHHHHcC-HHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHhhccc
Confidence 99999999998 88889999988887765 799999999988876543
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.86 E-value=5.9e-22 Score=195.37 Aligned_cols=156 Identities=18% Similarity=0.156 Sum_probs=107.5
Q ss_pred CCCcEEEEEeccccccc----------ChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHH
Q 039338 308 KNASLVLGVAGRLVKDK----------GHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRA 377 (493)
Q Consensus 308 ~~~~~~i~~~Gr~~~~K----------g~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~ 377 (493)
.+++.+++++|++...| .+..+++++..+ +++++++|++...+.+.++.++|.+.|+++ +.+
T Consensus 225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~---~~~ 296 (398)
T 4fzr_A 225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKLAQTLQPLPEGVLAAGQFP---LSA 296 (398)
T ss_dssp CSSCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC--------CCTTEEEESCCC---HHH
T ss_pred CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcchhhhccCCCcEEEeCcCC---HHH
Confidence 34557888899997554 355555555443 678888887776666667779999999985 567
Q ss_pred HHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCC----CCccceeeeCcceEEECC---CHHHHHHHHHHHHHcCc
Q 039338 378 FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFP----SIKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGP 450 (493)
Q Consensus 378 ~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~----~~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~ 450 (493)
+++.||++|. .|.+.+++|||++|+|+|+.... +.. +.+.+.+.|++++. ++++|+++|.++++| +
T Consensus 297 ll~~ad~~v~-----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~-~ 369 (398)
T 4fzr_A 297 IMPACDVVVH-----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSA-RLLHAAGAGVEVPWEQAGVESVLAACARIRDD-S 369 (398)
T ss_dssp HGGGCSEEEE-----CCCHHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHTTSEEECC-------CHHHHHHHHHHC-T
T ss_pred HHhhCCEEEe-----cCCHHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHcCCEEecCcccCCHHHHHHHHHHHHhC-H
Confidence 8889999995 33367999999999999997553 333 56778889999875 688999999999999 8
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 039338 451 MRLAQRGEACRQYAASMFTANKMALAYER 479 (493)
Q Consensus 451 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 479 (493)
+.++++++.+++.... .+++++++.+++
T Consensus 370 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 397 (398)
T 4fzr_A 370 SYVGNARRLAAEMATL-PTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHHHHHHHTTS-CCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcC-CCHHHHHHHHhc
Confidence 9999998888877655 799998887753
No 36
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.85 E-value=1.2e-20 Score=185.59 Aligned_cols=163 Identities=14% Similarity=0.103 Sum_probs=126.8
Q ss_pred CCCcEEEEEecccccccCh-HHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338 308 KNASLVLGVAGRLVKDKGH-PLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFV 386 (493)
Q Consensus 308 ~~~~~~i~~~Gr~~~~Kg~-~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v 386 (493)
.+++.++++.|+....|+. ..+++++.+. .+.|+++++++|++...+.+..+.++|.+.|+++..+ +++.||++|
T Consensus 216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~---ll~~ad~~v 291 (391)
T 3tsa_A 216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLNL---FLRTCELVI 291 (391)
T ss_dssp CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGG---TGGGCSEEE
T ss_pred CCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHHH---HHhhCCEEE
Confidence 4555788888998765544 6777777777 7767999999988766555556678999999997654 559999999
Q ss_pred eCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC-----CHHHHHHHHHHHHHcCcHHHHHHH
Q 039338 387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP-----NVESLHKTLEAAVSEGPMRLAQRG 457 (493)
Q Consensus 387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~-----d~~~l~~~i~~ll~~~~~~~~~~~ 457 (493)
. .|.+.+++|||++|+|+|+....+ .. +.+.+.+.|..+++ +++++++++.++++| ++.+++++
T Consensus 292 ~-----~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~-~~~~~~~~ 364 (391)
T 3tsa_A 292 C-----AGGSGTAFTATRLGIPQLVLPQYFDQFDYA-RNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGD-TGFAAAAI 364 (391)
T ss_dssp E-----CCCHHHHHHHHHTTCCEEECCCSTTHHHHH-HHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTC-THHHHHHH
T ss_pred e-----CCCHHHHHHHHHhCCCEEecCCcccHHHHH-HHHHHcCCEEecCcccccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 5 333569999999999999975532 22 45677889999874 799999999999999 88889998
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338 458 EACRQYAASMFTANKMALAYERLFL 482 (493)
Q Consensus 458 ~~~~~~~~~~fs~~~~~~~~~~~~~ 482 (493)
+.+++.... .+++++++.++++..
T Consensus 365 ~~~~~~~~~-~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 365 KLSDEITAM-PHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHTS-CCHHHHHHHHHHC--
T ss_pred HHHHHHHcC-CCHHHHHHHHHHHHh
Confidence 888777655 799999888877654
No 37
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.81 E-value=7.3e-19 Score=173.40 Aligned_cols=350 Identities=13% Similarity=0.103 Sum_probs=200.3
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecC-------
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEG------- 156 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 156 (493)
|||++++. ...|.-..+..|+++|+++||+|++++..... .. .+. .+ ..+.....
T Consensus 5 ~~il~~~~------~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~--~~-~~~--------~G-~~~~~~~~~~~~~~~ 66 (402)
T 3ia7_A 5 RHILFANV------QGHGHVYPSLGLVSELARRGHRITYVTTPLFA--DE-VKA--------AG-AEVVLYKSEFDTFHV 66 (402)
T ss_dssp CEEEEECC------SSHHHHHHHHHHHHHHHHTTCEEEEEECHHHH--HH-HHH--------TT-CEEEECCCGGGTSSS
T ss_pred CEEEEEeC------CCCcccccHHHHHHHHHhCCCEEEEEcCHHHH--HH-HHH--------cC-CEEEecccccccccc
Confidence 39999985 34677888999999999999999999964311 00 000 00 00000000
Q ss_pred -----CCCccc-----c----ccchHHHHHHhcCCCCcEEEeC-ccchhH---HhhhccCcEEEEeccchhhhhhhh---
Q 039338 157 -----EADKWR-----Y----SKGWEQFDEENQREPFDVVHSE-SVALPH---WLARNVTNLAVSWHGIALESLQSG--- 215 (493)
Q Consensus 157 -----~~~~~~-----~----~~~~~~~~~~~~~~~~DiI~~~-~~~~~~---~~~~~~p~~v~~~h~~~~~~~~~~--- 215 (493)
...... . ......+.+.+++.+||+||++ ...... ....++| ++...++.+.......
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP-~v~~~~~~~~~~~~~~~~~ 145 (402)
T 3ia7_A 67 PEVVKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRP-AVRLTGGFAANEHYSLFKE 145 (402)
T ss_dssp SSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCC-EEEEESSCCCBTTBCHHHH
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCC-EEEEecccccCcccccccc
Confidence 000000 0 0113455666778899999997 332222 2335678 7777766543211111
Q ss_pred hhhhhhcCCCCccchHhHhHHHHHHHHHHHH-------HHhhccC-CeEEEcChhHHHHHHHHhCCCCCcEEEecCCccC
Q 039338 216 IFQDLTRKPLEPMSLAFNKSLQGVMLKVLNE-------IRFFNKY-AHHVAISDSCGEMLRDVYQIPSERVHVILNGINE 287 (493)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~ 287 (493)
..... . ...+. ....+...+.+.... ..+.... +..++......+.....+ ..++..+.+.++.
T Consensus 146 ~~~~~-~-~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~~~~ 217 (402)
T 3ia7_A 146 LWKSN-G-QRHPA---DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETF---DERFAFVGPTLTG 217 (402)
T ss_dssp HHHHH-T-CCCGG---GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGC---CTTEEECCCCCCC
T ss_pred ccccc-c-ccChh---hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccC---CCCeEEeCCCCCC
Confidence 00000 0 00000 001111111111110 0112222 556666655444333222 2345555443321
Q ss_pred CCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEE-EeCCCcHHHHhhhcCcEEE
Q 039338 288 NEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIV-AGSGPWEQRYKDFGHQVLV 366 (493)
Q Consensus 288 ~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-~G~g~~~~~~~~l~~~V~~ 366 (493)
...... ......+++.++++.|+....+ .+.+.+++..+.+. ++++++ +|++...+.++++.++|.+
T Consensus 218 ~~~~~~---------~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~v~~ 285 (402)
T 3ia7_A 218 RDGQPG---------WQPPRPDAPVLLVSLGNQFNEH-PEFFRACAQAFADT--PWHVVMAIGGFLDPAVLGPLPPNVEA 285 (402)
T ss_dssp ----CC---------CCCSSTTCCEEEEECCSCSSCC-HHHHHHHHHHHTTS--SCEEEEECCTTSCGGGGCSCCTTEEE
T ss_pred cccCCC---------CcccCCCCCEEEEECCCCCcch-HHHHHHHHHHHhcC--CcEEEEEeCCcCChhhhCCCCCcEEE
Confidence 110000 0001234557888999987554 23333333334322 355555 6766566666667789999
Q ss_pred ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCC-C----CCccceeeeCcceEEECC---CHHHH
Q 039338 367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF-P----SIKGTIVVDDEFGFMFAP---NVESL 438 (493)
Q Consensus 367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~-~----~~~~e~v~~~~~G~~~~~---d~~~l 438 (493)
.|++++. ++++.||++|..+ | ..+++|||++|+|+|+... . +.. +.+.+.+.|..++. +++++
T Consensus 286 ~~~~~~~---~ll~~ad~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l 356 (402)
T 3ia7_A 286 HQWIPFH---SVLAHARACLTHG----T-TGAVLEAFAAGVPLVLVPHFATEAAPSA-ERVIELGLGSVLRPDQLEPASI 356 (402)
T ss_dssp ESCCCHH---HHHTTEEEEEECC----C-HHHHHHHHHTTCCEEECGGGCGGGHHHH-HHHHHTTSEEECCGGGCSHHHH
T ss_pred ecCCCHH---HHHhhCCEEEECC----C-HHHHHHHHHhCCCEEEeCCCcccHHHHH-HHHHHcCCEEEccCCCCCHHHH
Confidence 9999754 8999999999644 2 3689999999999997654 2 233 45677889999875 78999
Q ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 039338 439 HKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLC 483 (493)
Q Consensus 439 ~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 483 (493)
++++.++++| ++.++++++.+++.... .++++.++.+++++.+
T Consensus 357 ~~~~~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 357 REAVERLAAD-SAVRERVRRMQRDILSS-GGPARAADEVEAYLGR 399 (402)
T ss_dssp HHHHHHHHHC-HHHHHHHHHHHHHHHTS-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-HHHHHHHHHHHHHHhhC-ChHHHHHHHHHHHHhh
Confidence 9999999999 88888888877766544 7889999998888764
No 38
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.80 E-value=1.2e-18 Score=171.72 Aligned_cols=158 Identities=13% Similarity=0.061 Sum_probs=117.6
Q ss_pred CCCcEEEEEecccccc-cChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338 308 KNASLVLGVAGRLVKD-KGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFV 386 (493)
Q Consensus 308 ~~~~~~i~~~Gr~~~~-Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v 386 (493)
.+++.+++++|++... ++.+.+.+++..+.+. +++++++|++...+.+.++.++|.+.|+++ +.++++.||++|
T Consensus 230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~---~~~ll~~ad~~v 304 (398)
T 3oti_A 230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDISPLGTLPRNVRAVGWTP---LHTLLRTCTAVV 304 (398)
T ss_dssp CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCCGGGCSCCTTEEEESSCC---HHHHHTTCSEEE
T ss_pred CCCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcChhhhccCCCcEEEEccCC---HHHHHhhCCEEE
Confidence 4555888899999654 4666666666666543 688999888776666666778999999995 557788899999
Q ss_pred eCCCCCCCCChHHHHHHHcCCcEEecCC----CCCcc-ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHH
Q 039338 387 NPTLRPQGLDLTLMEAMMSGKPVMASRF----PSIKG-TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGE 458 (493)
Q Consensus 387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~----~~~~~-e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~ 458 (493)
.. |.+.+++|||++|+|+|+... .+... +.+.+.+.|+.++. +++.+. ++++| ++.++++++
T Consensus 305 ~~-----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~-~~~~~~~~~ 374 (398)
T 3oti_A 305 HH-----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGD-ESLRTAARE 374 (398)
T ss_dssp EC-----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHC-HHHHHHHHH
T ss_pred EC-----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcC-HHHHHHHHH
Confidence 53 345699999999999999543 33320 34566788999875 445554 88888 899999988
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHH
Q 039338 459 ACRQYAASMFTANKMALAYERLF 481 (493)
Q Consensus 459 ~~~~~~~~~fs~~~~~~~~~~~~ 481 (493)
.+++.... .+++.+++.++++.
T Consensus 375 ~~~~~~~~-~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 375 VREEMVAL-PTPAETVRRIVERI 396 (398)
T ss_dssp HHHHHHTS-CCHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCHHHHHHHHHHHh
Confidence 88776655 79999999888765
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.80 E-value=8.1e-20 Score=177.50 Aligned_cols=350 Identities=11% Similarity=0.047 Sum_probs=219.0
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC-Ccc
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA-DKW 161 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 161 (493)
-+|+++|+..=| . -.-+..+.++|.+. +++.++.+.... +....... .+.+....+.+....... ...
T Consensus 9 ~~~~~~v~GtRp------e-~~k~~p~~~~l~~~-~~~~~~~tgqh~--~~~~~~~~-~~~~~i~~~~~~l~~~~~~~~~ 77 (385)
T 4hwg_A 9 MLKVMTIVGTRP------E-LIKLCCVISEFDKH-TKHILVHTGQNY--AYELNQVF-FDDMGIRKPDYFLEVAADNTAK 77 (385)
T ss_dssp CCEEEEEECSHH------H-HHHHHHHHHHHHHH-SEEEEEECSCHH--HHHHTHHH-HC-CCCCCCSEECCCCCCCSHH
T ss_pred hhheeEEEEcCH------h-HHHHHHHHHHHHhc-CCEEEEEeCCCC--ChhHHHHH-HhhCCCCCCceecCCCCCCHHH
Confidence 368999986322 1 12367788888887 998888776543 11111100 000111112222111111 111
Q ss_pred ccccchHHHHHHhcCCCCcEEEeCcc---chh--HHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHH
Q 039338 162 RYSKGWEQFDEENQREPFDVVHSESV---ALP--HWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL 236 (493)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~DiI~~~~~---~~~--~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (493)
........+.+.+++.+||+|++++. .++ +....++| ++....+.... . ..+
T Consensus 78 ~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IP-v~h~eaglrs~--------------~--------~~~ 134 (385)
T 4hwg_A 78 SIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIP-IFHMEAGNRCF--------------D--------QRV 134 (385)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCC-EEEESCCCCCS--------------C--------TTS
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCC-EEEEeCCCccc--------------c--------ccC
Confidence 22345566777778889999999763 222 22334667 65544442110 0 000
Q ss_pred HHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCCccCCcccchhhhhhhCCCCCCcEEEE
Q 039338 237 QGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENEYGVDLSLGQSFRSRIGIPKNASLVLG 315 (493)
Q Consensus 237 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~~~~~~~~~~~~r~~~~i~~~~~~~i~ 315 (493)
.....|. ..-+-+|.+++.++..++.+.+ .|++++++.++.|.+ |...+......+..+++++|++++ +++++
T Consensus 135 pee~nR~----~~~~~a~~~~~~te~~~~~l~~-~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~-~~iLv 208 (385)
T 4hwg_A 135 PEEINRK----IIDHISDVNITLTEHARRYLIA-EGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPK-QYFLI 208 (385)
T ss_dssp THHHHHH----HHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTT-SEEEE
T ss_pred cHHHHHH----HHHhhhceeecCCHHHHHHHHH-cCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcC-CEEEE
Confidence 0001111 1123478899999999999988 689889999999854 432221112234567888999774 47777
Q ss_pred Eecccc---cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338 316 VAGRLV---KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFV 386 (493)
Q Consensus 316 ~~Gr~~---~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v 386 (493)
+.||.. ..|+++.+++|+.++.+++ ++++++.......+.++++ .++|.+.+.++..++..+|+.||+++
T Consensus 209 t~hr~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvv 287 (385)
T 4hwg_A 209 SSHREENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCIL 287 (385)
T ss_dssp EECCC-----CHHHHHHHHHHHHHHHHH-CCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEE
T ss_pred EeCCchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEE
Confidence 888753 3478899999999997765 6777775543344455544 26899999999899999999999999
Q ss_pred eCCCCCCCCChHHHHHHHcCCcEEecCCCC-CccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHH-H
Q 039338 387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPS-IKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQY-A 464 (493)
Q Consensus 387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~-~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~ 464 (493)
.+| |....||+++|+|+|+.+... .+ |.+..| ++.++..|++++.+++.++++| ++.++.|++++..+ .
T Consensus 288 t~S------Ggv~~EA~alG~Pvv~~~~~ter~-e~v~~G-~~~lv~~d~~~i~~ai~~ll~d-~~~~~~m~~~~~~~~g 358 (385)
T 4hwg_A 288 SDS------GTITEEASILNLPALNIREAHERP-EGMDAG-TLIMSGFKAERVLQAVKTITEE-HDNNKRTQGLVPDYNE 358 (385)
T ss_dssp ECC------TTHHHHHHHTTCCEEECSSSCSCT-HHHHHT-CCEECCSSHHHHHHHHHHHHTT-CBTTBCCSCCCHHHHT
T ss_pred ECC------ccHHHHHHHcCCCEEEcCCCccch-hhhhcC-ceEEcCCCHHHHHHHHHHHHhC-hHHHHHhhccCCCCCC
Confidence 655 236799999999999986544 34 665544 6777766999999999999998 77666666555544 2
Q ss_pred HHhcCHHHHHHHHHHHHHH
Q 039338 465 ASMFTANKMALAYERLFLC 483 (493)
Q Consensus 465 ~~~fs~~~~~~~~~~~~~~ 483 (493)
.. .+.+++++.+.+.+..
T Consensus 359 ~g-~aa~rI~~~l~~~~~~ 376 (385)
T 4hwg_A 359 AG-LVSKKILRIVLSYVDY 376 (385)
T ss_dssp CC-CHHHHHHHHHHHHHHH
T ss_pred CC-hHHHHHHHHHHHHhhh
Confidence 22 4566677766666543
No 40
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.79 E-value=3.1e-18 Score=169.63 Aligned_cols=353 Identities=15% Similarity=0.121 Sum_probs=198.2
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-C-
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE-A- 158 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 158 (493)
.+.|||++++. ...|.-..+..|+++|+++||+|++++..... .. ... .+. .+...... +
T Consensus 18 ~~m~rIl~~~~------~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~--~~-~~~--------~G~-~~~~~~~~~~~ 79 (415)
T 3rsc_A 18 RHMAHLLIVNV------ASHGLILPTLTVVTELVRRGHRVSYVTAGGFA--EP-VRA--------AGA-TVVPYQSEIID 79 (415)
T ss_dssp -CCCEEEEECC------SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGH--HH-HHH--------TTC-EEEECCCSTTT
T ss_pred ccCCEEEEEeC------CCccccccHHHHHHHHHHCCCEEEEEeCHHHH--HH-HHh--------cCC-EEEeccccccc
Confidence 34589999985 34677778899999999999999999954321 00 000 000 01110000 0
Q ss_pred ----------Ccc---------ccccchHHHHHHhcCCCCcEEEeC-ccchhH---HhhhccCcEEEEeccchhhhhhh-
Q 039338 159 ----------DKW---------RYSKGWEQFDEENQREPFDVVHSE-SVALPH---WLARNVTNLAVSWHGIALESLQS- 214 (493)
Q Consensus 159 ----------~~~---------~~~~~~~~~~~~~~~~~~DiI~~~-~~~~~~---~~~~~~p~~v~~~h~~~~~~~~~- 214 (493)
... ........+.+.+++.+||+|++. ...+.. ....++| ++...++........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP-~v~~~~~~~~~~~~~~ 158 (415)
T 3rsc_A 80 ADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRP-AVRLSAAFASNEHYSF 158 (415)
T ss_dssp CCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCC-EEEEESSCCCCSSCCH
T ss_pred cccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCC-EEEEEecccccCcccc
Confidence 000 001123455666778899999987 332222 2334678 777776654211100
Q ss_pred --hhhhhhhcCCCCccchHhHhHHHHHHHHHHHH-------HHhhccC-CeEEEcChhHHHHHHHHhCCCCCcEEEecCC
Q 039338 215 --GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNE-------IRFFNKY-AHHVAISDSCGEMLRDVYQIPSERVHVILNG 284 (493)
Q Consensus 215 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ng 284 (493)
....... ...+. ....+...+.+.... ..+.... +..++......+...... ..++..+.+.
T Consensus 159 ~~~~~~~~~--~~~p~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~ 230 (415)
T 3rsc_A 159 SQDMVTLAG--TIDPL---DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTF---DDRFVFVGPC 230 (415)
T ss_dssp HHHHHHHHT--CCCGG---GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGC---CTTEEECCCC
T ss_pred ccccccccc--cCChh---hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccC---CCceEEeCCC
Confidence 0000000 00000 001111112111110 0111112 555555544433332211 2334444332
Q ss_pred ccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEE-EeCCCcHHHHhhhcCc
Q 039338 285 INENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIV-AGSGPWEQRYKDFGHQ 363 (493)
Q Consensus 285 vd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-~G~g~~~~~~~~l~~~ 363 (493)
+.... . .........+++.++++.|+..... .+.+..++..+.+ .+ +++++ +|.+...+.++++.++
T Consensus 231 ~~~~~-----~----~~~~~~~~~~~~~v~v~~Gs~~~~~-~~~~~~~~~al~~-~~-~~~v~~~g~~~~~~~l~~~~~~ 298 (415)
T 3rsc_A 231 FDDRR-----F----LGEWTRPADDLPVVLVSLGTTFNDR-PGFFRDCARAFDG-QP-WHVVMTLGGQVDPAALGDLPPN 298 (415)
T ss_dssp CCCCG-----G----GCCCCCCSSCCCEEEEECTTTSCCC-HHHHHHHHHHHTT-SS-CEEEEECTTTSCGGGGCCCCTT
T ss_pred CCCcc-----c----CcCccccCCCCCEEEEECCCCCCCh-HHHHHHHHHHHhc-CC-cEEEEEeCCCCChHHhcCCCCc
Confidence 21110 0 0000011234558888999986433 2333333333322 23 67766 6766566666667789
Q ss_pred EEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHH
Q 039338 364 VLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVE 436 (493)
Q Consensus 364 V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~ 436 (493)
|.+.|++++. ++++.||++|..+ | ..+++|||++|+|+|+....+ .. +.+.+.+.|..++. +++
T Consensus 299 v~~~~~~~~~---~ll~~ad~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~l~~~g~g~~~~~~~~~~~ 369 (415)
T 3rsc_A 299 VEAHRWVPHV---KVLEQATVCVTHG----G-MGTLMEALYWGRPLVVVPQSFDVQPMA-RRVDQLGLGAVLPGEKADGD 369 (415)
T ss_dssp EEEESCCCHH---HHHHHEEEEEESC----C-HHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHHTCEEECCGGGCCHH
T ss_pred EEEEecCCHH---HHHhhCCEEEECC----c-HHHHHHHHHhCCCEEEeCCcchHHHHH-HHHHHcCCEEEcccCCCCHH
Confidence 9999999754 8899999999643 2 358999999999999965432 22 45566778988875 789
Q ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 039338 437 SLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLC 483 (493)
Q Consensus 437 ~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 483 (493)
++++++.++++| ++.++++.+.+++.... ..++++++.+++++.+
T Consensus 370 ~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 370 TLLAAVGAVAAD-PALLARVEAMRGHVRRA-GGAARAADAVEAYLAR 414 (415)
T ss_dssp HHHHHHHHHHTC-HHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-HHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhhc
Confidence 999999999999 88888888777776554 6888899888887754
No 41
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.79 E-value=3.2e-18 Score=170.86 Aligned_cols=331 Identities=11% Similarity=0.058 Sum_probs=210.4
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK 160 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (493)
.++.+|.+++..+ ...-+.+....+.++ .+..+||++++ .... +... ......++.....
T Consensus 273 ~K~l~ig~ls~f~----~~HsV~r~~~~~l~~-dR~~FEV~~Ys-~~~~--D~~t---------r~~~d~f~~l~~~--- 332 (631)
T 3q3e_A 273 NKPVMVVLLEHFH----SAHSIYRTHSTSMIA-AREHFYLIGLG-SPSV--DQAG---------QEVFDEFHLVAGD--- 332 (631)
T ss_dssp TEEEEEEECSSCC----TTSHHHHHHHHHHHH-HTTTSEEEEEE-CTTS--CHHH---------HTTSSEEEECCCS---
T ss_pred CCeEEEEEeCccc----CCCcHHHHHHHHHHh-hhhcEEEEEEe-CCCC--CHHH---------HhcCcEEEECCCC---
Confidence 4556777777754 445555666666666 46679999998 3322 1110 1111222221111
Q ss_pred cccccchHHHHHHhcCCCCcEEEeCc---cchhHHh--hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338 161 WRYSKGWEQFDEENQREPFDVVHSES---VALPHWL--ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS 235 (493)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~DiI~~~~---~~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (493)
........+.+.+++.++||++--+ .....++ .+..| +.+++-|++...
T Consensus 333 -s~~~~~~~ia~~Ir~d~IDILVdL~g~t~~~~i~~aa~RpAP-VQvs~lGyp~TT------------------------ 386 (631)
T 3q3e_A 333 -NMKQKLEFIRSVCESNGAAIFYMPSIGMDMTTIFASNTRLAP-IQAIALGHPATT------------------------ 386 (631)
T ss_dssp -SHHHHHHHHHHHHHHHTCSEEEESCCSSSHHHHHHTTSCCSS-EEEEECSSCSCC------------------------
T ss_pred -CccccHHHHHHHHHhcCCCEEEECCCCCCchhHHHHhCCCch-heEeccCCCccc------------------------
Confidence 0011245677777888999997633 2333333 35557 999998865321
Q ss_pred HHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCC-CcEEE
Q 039338 236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKN-ASLVL 314 (493)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~-~~~~i 314 (493)
-+...|.+++-..... -... -.+++..+|+..-. +.+... ...+..+|++.+ +.++|
T Consensus 387 -------------Gl~~iDY~i~D~~~~~--~~~~---ysEklirLP~~~~~--~~p~~~--~p~r~~~~lp~~~G~v~F 444 (631)
T 3q3e_A 387 -------------HSDFIEYVIVEDDYVG--SEEC---FSETLLRLPKDALP--YVPSAL--APEKVDYLLRENPEVVNI 444 (631)
T ss_dssp -------------CCTTCCEEEEEGGGCC--CGGG---CSSEEEEECTTSSC--CCCCTT--CCSSCCCCCCSCCSEEEE
T ss_pred -------------CcccCCEEEeCCCCCC--cccC---ceeeEEECCCCccc--cCCccc--CCccccccCCcCCCeEEE
Confidence 1234566665332111 1222 25788888864211 112111 123566788774 45888
Q ss_pred EEecccccccChHHHHHHHHHHHhhCCCeEEE--EEeCC--CcHHHHhh-----hcCcEEEecCCCHHHHHHHHHHcCEE
Q 039338 315 GVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLI--VAGSG--PWEQRYKD-----FGHQVLVMGSMSPAELRAFYNAIDIF 385 (493)
Q Consensus 315 ~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~--i~G~g--~~~~~~~~-----l~~~V~~~g~~~~~~~~~~~~~adv~ 385 (493)
+++++. .|..+.++++|.++.++.|+..++ ++|++ ......++ +.++|.|.|.++.++....|+.+|++
T Consensus 445 g~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIf 522 (631)
T 3q3e_A 445 GIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMM 522 (631)
T ss_dssp EEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEE
T ss_pred EECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEE
Confidence 888875 599999999999999999987764 35632 33332222 23799999999999999999999999
Q ss_pred EeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceee------eCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHH
Q 039338 386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVV------DDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEA 459 (493)
Q Consensus 386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~------~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~ 459 (493)
+.|+. .+.|++.+|||+||+|||+...++.. ..+. -|-.++++..|.+++++...++..| ++.+++++++
T Consensus 523 LDpfp--y~GgtTtlEALwmGVPVVTl~G~~~a-sRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D-~~~l~~LR~~ 598 (631)
T 3q3e_A 523 VNPFP--FGNTNGIIDMVTLGLVGVCKTGAEVH-EHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAEN-HQERLELRRY 598 (631)
T ss_dssp ECCSS--SCCSHHHHHHHHTTCCEEEECCSSHH-HHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred EeCCc--ccCChHHHHHHHcCCCEEeccCCcHH-HHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCC-HHHHHHHHHH
Confidence 99983 46699999999999999997655444 2221 1333433333889999999999999 9999999999
Q ss_pred HHHHHHH--hcCHHHHHHHHHHHHHHHhhc
Q 039338 460 CRQYAAS--MFTANKMALAYERLFLCIKNE 487 (493)
Q Consensus 460 ~~~~~~~--~fs~~~~~~~~~~~~~~i~~~ 487 (493)
.++.... .|+ ...+++++.|+++.++
T Consensus 599 Lr~~~~~spLFd--~~~~~~e~~ye~~~~~ 626 (631)
T 3q3e_A 599 IIENNGLNTLFT--GDPRPMGQVFLEKLNA 626 (631)
T ss_dssp HHHSCCHHHHTC--SCCTHHHHHHHHHHHH
T ss_pred HHHHhhhCCCcc--hhHHHHHHHHHHHHHH
Confidence 9887644 344 4455666666655543
No 42
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.75 E-value=7.3e-17 Score=158.05 Aligned_cols=157 Identities=18% Similarity=0.163 Sum_probs=118.4
Q ss_pred CCcEEEEEecccccc-------cChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHH
Q 039338 309 NASLVLGVAGRLVKD-------KGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNA 381 (493)
Q Consensus 309 ~~~~~i~~~Gr~~~~-------Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~ 381 (493)
+++.+++++|++... +.+..+++++..+ +++++++++++..+.++.+.++|.+ |++++ .++|+.
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~---~~~l~~ 279 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPDTVAEALRAEVPQARV-GWTPL---DVVAPT 279 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCHHHHHHHHHHCTTSEE-ECCCH---HHHGGG
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCCCCHHhhCCCCCceEE-cCCCH---HHHHhh
Confidence 445788899999865 5667777776543 5788876554444445556789999 99975 457899
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHH
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLA 454 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~ 454 (493)
||++|..+ | +++++|||++|+|+|+.+..+ .. +.+.+.+.|+.++. ++++++++|.++++| ++.++
T Consensus 280 ~d~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~dq~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~ 352 (384)
T 2p6p_A 280 CDLLVHHA----G-GVSTLTGLSAGVPQLLIPKGSVLEAPA-RRVADYGAAIALLPGEDSTEAIADSCQELQAK-DTYAR 352 (384)
T ss_dssp CSEEEECS----C-TTHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHHTSEEECCTTCCCHHHHHHHHHHHHHC-HHHHH
T ss_pred CCEEEeCC----c-HHHHHHHHHhCCCEEEccCcccchHHH-HHHHHCCCeEecCcCCCCHHHHHHHHHHHHcC-HHHHH
Confidence 99999743 2 458999999999999998643 33 44666778999874 789999999999998 88888
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338 455 QRGEACRQYAASMFTANKMALAYERLFL 482 (493)
Q Consensus 455 ~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 482 (493)
++++.+++.... -..+++++.++++..
T Consensus 353 ~~~~~~~~~~~~-~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 353 RAQDLSREISGM-PLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHHTS-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCHHHHHHHHHHHhh
Confidence 888877766555 477888877776654
No 43
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.71 E-value=8.3e-16 Score=161.02 Aligned_cols=183 Identities=15% Similarity=0.179 Sum_probs=144.2
Q ss_pred hhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH-HHH----hhhc---CcEEEecCC
Q 039338 299 SFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE-QRY----KDFG---HQVLVMGSM 370 (493)
Q Consensus 299 ~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~-~~~----~~l~---~~V~~~g~~ 370 (493)
..|..+|++++. ++|+++.++. |-.+.++++|.++.++.|+.+|++...+... +.+ ++.+ ++|+|.+..
T Consensus 512 ~~R~~~gLp~~~-v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 512 TTRSQYGLPEDA-IVYCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp EEGGGGTCCTTS-EEEECCSCGG--GCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred cchhhcCCCCCC-EEEEeCCccc--cCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCC
Confidence 457889999887 8887777665 8889999999999999999999998765432 222 2223 789999999
Q ss_pred CHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccc----eeeeCcceEEECCCHHHHHHHHHHHH
Q 039338 371 SPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGT----IVVDDEFGFMFAPNVESLHKTLEAAV 446 (493)
Q Consensus 371 ~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e----~v~~~~~G~~~~~d~~~l~~~i~~ll 446 (493)
+.++....|+.+|+++.|. +.+-++|.+||+++|+|||+-....+... ++..-+..-++..|.+++.+...++.
T Consensus 589 ~~~~~l~~~~~~Di~LDt~--p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la 666 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTP--LCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLG 666 (723)
T ss_dssp CHHHHHHHGGGCSEEECCS--SSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCeEEeCCC--CcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHh
Confidence 9999999999999999987 45778999999999999998764333310 11111111123338899999999999
Q ss_pred HcCcHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHhhc
Q 039338 447 SEGPMRLAQRGEACRQYAAS--MFTANKMALAYERLFLCIKNE 487 (493)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~i~~~ 487 (493)
.| ++.+.+++++.++.... -|+.+..++.+++.|+++..+
T Consensus 667 ~d-~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 667 TD-LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred cC-HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 99 99999999999888766 499999999999999998643
No 44
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.71 E-value=4e-16 Score=155.62 Aligned_cols=159 Identities=13% Similarity=0.060 Sum_probs=117.8
Q ss_pred CCCcEEEEEecccccc-----cChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHc
Q 039338 308 KNASLVLGVAGRLVKD-----KGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAI 382 (493)
Q Consensus 308 ~~~~~~i~~~Gr~~~~-----Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~a 382 (493)
++++.++++.|+.... +.+..+++++..+ ++++++.+++...+.++++.++|.+.|++++. ++|..|
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~---~ll~~a 336 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQLEGVANIPDNVRTVGFVPMH---ALLPTC 336 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTTSSCSSCCSSEEECCSCCHH---HHGGGC
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcchhhhccCCCCEEEecCCCHH---HHHhhC
Confidence 4455788899998753 7788888887654 57888876655443343456899999999854 568999
Q ss_pred CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHH
Q 039338 383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQ 455 (493)
Q Consensus 383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~ 455 (493)
|++|.. |.+.+++|||++|+|+|+.+..+ .. +.+.+.+.|+.++. ++++++++|.++++| ++.+++
T Consensus 337 d~~V~~-----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~ 409 (441)
T 2yjn_A 337 AATVHH-----GGPGSWHTAAIHGVPQVILPDGWDTGVRA-QRTQEFGAGIALPVPELTPDQLRESVKRVLDD-PAHRAG 409 (441)
T ss_dssp SEEEEC-----CCHHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHHTSEEECCTTTCCHHHHHHHHHHHHHC-HHHHHH
T ss_pred CEEEEC-----CCHHHHHHHHHhCCCEEEeCCcccHHHHH-HHHHHcCCEEEcccccCCHHHHHHHHHHHhcC-HHHHHH
Confidence 999962 33579999999999999998743 22 45667788999875 789999999999998 888888
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338 456 RGEACRQYAASMFTANKMALAYERLFL 482 (493)
Q Consensus 456 ~~~~~~~~~~~~fs~~~~~~~~~~~~~ 482 (493)
+++.+++.... ...+++++.+++++.
T Consensus 410 ~~~~~~~~~~~-~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 410 AARMRDDMLAE-PSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHTS-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CCHHHHHHHHHHHHH
Confidence 88877766554 688888888887764
No 45
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.68 E-value=1.2e-14 Score=144.31 Aligned_cols=160 Identities=14% Similarity=0.076 Sum_probs=113.4
Q ss_pred CCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEE-EEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338 309 NASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYL-IVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVN 387 (493)
Q Consensus 309 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ 387 (493)
+++.++++.|+.. .+..+.+.+++..+.+ .++++ +++|.+...+.+.++.++|.+.+++++. ++|+.||++|.
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~d~~v~ 327 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQL---DILTKASAFIT 327 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHH---HHHTTCSEEEE
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCChHHhccCCCCeEEecCCCHH---HHHhhCCEEEE
Confidence 4457888999987 3444444444444533 35676 4568765444444566899999999854 68999999986
Q ss_pred CCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHH
Q 039338 388 PTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEAC 460 (493)
Q Consensus 388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~ 460 (493)
. +-.++++||+++|+|+|+....+ .. +.+.+.+.|+.++. ++++++++|.++++| ++.++++++.+
T Consensus 328 ~-----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~ 400 (424)
T 2iya_A 328 H-----AGMGSTMEALSNAVPMVAVPQIAEQTMNA-ERIVELGLGRHIPRDQVTAEKLREAVLAVASD-PGVAERLAAVR 400 (424)
T ss_dssp C-----CCHHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHTTSEEECCGGGCCHHHHHHHHHHHHHC-HHHHHHHHHHH
T ss_pred C-----CchhHHHHHHHcCCCEEEecCccchHHHH-HHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHH
Confidence 2 22479999999999999997643 12 34566778988874 889999999999998 77777776666
Q ss_pred HHHHHHhcCHHHHHHHHHHHHH
Q 039338 461 RQYAASMFTANKMALAYERLFL 482 (493)
Q Consensus 461 ~~~~~~~fs~~~~~~~~~~~~~ 482 (493)
++... ....++.++.+++++.
T Consensus 401 ~~~~~-~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 401 QEIRE-AGGARAAADILEGILA 421 (424)
T ss_dssp HHHHT-SCHHHHHHHHHHHHHH
T ss_pred HHHHh-cCcHHHHHHHHHHHHh
Confidence 55443 3566777777776654
No 46
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.59 E-value=1e-14 Score=143.44 Aligned_cols=161 Identities=14% Similarity=0.096 Sum_probs=104.9
Q ss_pred CCCCcEEEEEecccccccC-hHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEE
Q 039338 307 PKNASLVLGVAGRLVKDKG-HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIF 385 (493)
Q Consensus 307 ~~~~~~~i~~~Gr~~~~Kg-~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~ 385 (493)
..+++.++++.|++...++ .+.+.+++..+.+ .+.++++.+.+...+....+.+++.+.+++|+. +++..+|++
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~---~lL~~~~~~ 308 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDLALLGELPANVRVVEWIPLG---ALLETCDAI 308 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCCCCCCCCCTTEEEECCCCHH---HHHTTCSEE
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCccccccccCCCCEEEEeecCHH---HHhhhhhhe
Confidence 3455577888898865443 3444555555544 356666666554444445566899999999765 567889999
Q ss_pred EeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Q 039338 386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQ 462 (493)
Q Consensus 386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 462 (493)
|. .+-.++++|||++|+|+|+....+-.. +.+++.+.|+.++. .+..+++|.++++| ++.+++..+-+++
T Consensus 309 v~-----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~-~~~~~~al~~lL~d-~~~r~~a~~l~~~ 381 (400)
T 4amg_A 309 IH-----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEA-GSLGAEQCRRLLDD-AGLREAALRVRQE 381 (400)
T ss_dssp EE-----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCT-TTCSHHHHHHHHHC-HHHHHHHHHHHHH
T ss_pred ec-----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCC-CCchHHHHHHHHcC-HHHHHHHHHHHHH
Confidence 85 233569999999999999987654210 34555667887774 34467889999998 7766555444433
Q ss_pred HHHHhcCHHHHHHHHHHH
Q 039338 463 YAASMFTANKMALAYERL 480 (493)
Q Consensus 463 ~~~~~fs~~~~~~~~~~~ 480 (493)
+...-+....++.++++
T Consensus 382 -~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 382 -MSEMPPPAETAAXLVAL 398 (400)
T ss_dssp -HHTSCCHHHHHHHHHHH
T ss_pred -HHcCCCHHHHHHHHHHh
Confidence 33434777777777664
No 47
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.52 E-value=3.8e-13 Score=132.87 Aligned_cols=156 Identities=17% Similarity=0.164 Sum_probs=104.8
Q ss_pred CcEEEEEeccc-ccccChHHHHHHHHHHHhhCCCeEEEEE-eCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338 310 ASLVLGVAGRL-VKDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVN 387 (493)
Q Consensus 310 ~~~~i~~~Gr~-~~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ 387 (493)
++.++++.|+. ...+..+.+++++..+ +.+++++ |.+... ...+.++|.+.+++++.+ ++.+||++|.
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~~~~~~~v~~~~~~~~~~---~l~~~d~~v~ 307 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH-----GRRVILSRGWADLV--LPDDGADCFAIGEVNHQV---LFGRVAAVIH 307 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT-----TCCEEECTTCTTCC--CSSCGGGEEECSSCCHHH---HGGGSSEEEE
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC-----CCeEEEEeCCCccc--ccCCCCCEEEeCcCChHH---HHhhCCEEEe
Confidence 34678899998 4777788888888765 3455554 755432 133457999999998654 5799999996
Q ss_pred CCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHH
Q 039338 388 PTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEAC 460 (493)
Q Consensus 388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~ 460 (493)
. .| .++++|||++|+|+|+.+..+ .. +.+.+.+.|+.++. +.+++.++|.++ +| ++.++++.+.+
T Consensus 308 ~----~G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~~~~~~~~~~ 379 (415)
T 1iir_A 308 H----GG-AGTTHVAARAGAPQILLPQMADQPYYA-GRVAELGVGVAHDGPIPTFDSLSAALATA-LT-PETHARATAVA 379 (415)
T ss_dssp C----CC-HHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECSSSSCCHHHHHHHHHHH-TS-HHHHHHHHHHH
T ss_pred C----CC-hhHHHHHHHcCCCEEECCCCCccHHHH-HHHHHCCCcccCCcCCCCHHHHHHHHHHH-cC-HHHHHHHHHHH
Confidence 3 23 469999999999999997644 22 34566678998864 789999999999 77 76666555544
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhcc
Q 039338 461 RQYAASMFTANKMALAYERLFLCIKNET 488 (493)
Q Consensus 461 ~~~~~~~fs~~~~~~~~~~~~~~i~~~~ 488 (493)
++. ....-+++..+.+++++..+
T Consensus 380 ~~~-----~~~~~~~~~~~~i~~~~~~~ 402 (415)
T 1iir_A 380 GTI-----RTDGAAVAARLLLDAVSREK 402 (415)
T ss_dssp HHS-----CSCHHHHHHHHHHHHHHTC-
T ss_pred HHH-----hhcChHHHHHHHHHHHHhcc
Confidence 432 22334444444455544443
No 48
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.50 E-value=7.8e-13 Score=130.07 Aligned_cols=156 Identities=17% Similarity=0.118 Sum_probs=104.6
Q ss_pred CCcEEEEEecccc-cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338 309 NASLVLGVAGRLV-KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVN 387 (493)
Q Consensus 309 ~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ 387 (493)
+++.++++.|+.. ..+....+++++..+ ++++++.++....+. .++.++|.+.+++++. +++..+|++|.
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~~~-~~~~~~v~~~~~~~~~---~ll~~~d~~v~ 290 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGLGR-IDEGDDCLVVGEVNHQ---VLFGRVAAVVH 290 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTCCC-SSCCTTEEEESSCCHH---HHGGGSSEEEE
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCccccc-ccCCCCEEEecCCCHH---HHHhhCcEEEE
Confidence 4457788899987 556677777777665 466666644322211 1335899999999754 56789999996
Q ss_pred CCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHHH
Q 039338 388 PTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEACR 461 (493)
Q Consensus 388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~~ 461 (493)
.+ | ..++.||+++|+|+|+....+-.. +.+.+.+.|..++. +++++.+++.++++ ++.++++.+.+.
T Consensus 291 ~g----G-~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~--~~~~~~~~~~~~ 363 (404)
T 3h4t_A 291 HG----G-AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT--PGIRARAAAVAG 363 (404)
T ss_dssp CC----C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS--HHHHHHHHHHHT
T ss_pred CC----c-HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 32 3 368999999999999987644210 23556678888764 78999999999986 555555554444
Q ss_pred HHHHHhcCHHHHHHHHHHHHH
Q 039338 462 QYAASMFTANKMALAYERLFL 482 (493)
Q Consensus 462 ~~~~~~fs~~~~~~~~~~~~~ 482 (493)
+... -..+++++.++++++
T Consensus 364 ~~~~--~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 364 TIRT--DGTTVAAKLLLEAIS 382 (404)
T ss_dssp TCCC--CHHHHHHHHHHHHHH
T ss_pred HHhh--hHHHHHHHHHHHHHh
Confidence 3322 255566666655543
No 49
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.43 E-value=7.1e-13 Score=131.02 Aligned_cols=135 Identities=15% Similarity=0.080 Sum_probs=95.2
Q ss_pred cEEEEEecccc---cccChHHHHHHHHHHHhhCCCeEEEEE-eCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338 311 SLVLGVAGRLV---KDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFV 386 (493)
Q Consensus 311 ~~~i~~~Gr~~---~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v 386 (493)
+.++++.|+.. ..+..+.+++++..+ +.+++++ |.+... ...+.+++.+.+++++. ++|.+||++|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~~~~~~~v~~~~~~~~~---~ll~~~d~~v 307 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTELV--LPDDRDDCFAIDEVNFQ---ALFRRVAAVI 307 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTCC--CSCCCTTEEEESSCCHH---HHGGGSSEEE
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCcccc--ccCCCCCEEEeccCChH---HHhccCCEEE
Confidence 46777889985 356666777777655 3456554 755332 13455799999999854 5679999999
Q ss_pred eCCCCCCCCChHHHHHHHcCCcEEecCCCCCc---cceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHH
Q 039338 387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK---GTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEAC 460 (493)
Q Consensus 387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~---~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~ 460 (493)
.. .| ..+++||+++|+|+|+....+-. .+.+++.+.|..++. +.+++.++|.++ .| ++.++++++.+
T Consensus 308 ~~----~G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~~~~~~~~~~ 380 (416)
T 1rrv_A 308 HH----GS-AGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LA-PETRARAEAVA 380 (416)
T ss_dssp EC----CC-HHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TS-HHHHHHHHHHT
T ss_pred ec----CC-hhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hC-HHHHHHHHHHH
Confidence 62 23 46999999999999998764311 024556778888863 789999999999 77 76666665544
Q ss_pred HH
Q 039338 461 RQ 462 (493)
Q Consensus 461 ~~ 462 (493)
++
T Consensus 381 ~~ 382 (416)
T 1rrv_A 381 GM 382 (416)
T ss_dssp TT
T ss_pred HH
Confidence 43
No 50
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.34 E-value=2.9e-12 Score=109.82 Aligned_cols=129 Identities=12% Similarity=0.163 Sum_probs=96.1
Q ss_pred CCCcEEEEEecccc---cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCE
Q 039338 308 KNASLVLGVAGRLV---KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDI 384 (493)
Q Consensus 308 ~~~~~~i~~~Gr~~---~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv 384 (493)
.+++.+++++|++. +.|.+..+++++..+ +.++++++++...+ .+.++|.+.|+++++++..+ ++||+
T Consensus 19 ~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~---~~~~~v~~~~~~~~~~~l~~-~~ad~ 89 (170)
T 2o6l_A 19 GENGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKPD---TLGLNTRLYKWIPQNDLLGH-PKTRA 89 (170)
T ss_dssp TTTCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCCT---TCCTTEEEESSCCHHHHHTS-TTEEE
T ss_pred CCCCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCcc---cCCCcEEEecCCCHHHHhcC-CCcCE
Confidence 34457888999986 556677777776543 36777776554322 35679999999987655433 99999
Q ss_pred EEeCCCCCCCCChHHHHHHHcCCcEEecCCCCC----ccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHH
Q 039338 385 FVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI----KGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMR 452 (493)
Q Consensus 385 ~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~----~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~ 452 (493)
+|.. +.+.+++|||++|+|+|+.+..+- . +.+.+.+.|+.++. ++++++++|.+++++ ++.
T Consensus 90 ~I~~-----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~ 157 (170)
T 2o6l_A 90 FITH-----GGANGIYEAIYHGIPMVGIPLFADQPDNI-AHMKARGAAVRVDFNTMSSTDLLNALKRVIND-PSY 157 (170)
T ss_dssp EEEC-----CCHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC-HHH
T ss_pred EEEc-----CCccHHHHHHHcCCCEEeccchhhHHHHH-HHHHHcCCeEEeccccCCHHHHHHHHHHHHcC-HHH
Confidence 9963 235899999999999999987431 2 45677789999875 789999999999988 553
No 51
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.24 E-value=2.3e-10 Score=116.92 Aligned_cols=232 Identities=13% Similarity=0.109 Sum_probs=163.6
Q ss_pred hhccCCeEEEcChhHHHHHHHH-----hCCCCCcEEEecCCccCCCcc----CC--------------------------
Q 039338 249 FFNKYAHHVAISDSCGEMLRDV-----YQIPSERVHVILNGINENEYG----VD-------------------------- 293 (493)
Q Consensus 249 ~~~~~d~ii~~S~~~~~~~~~~-----~~~~~~~v~vi~ngvd~~~~~----~~-------------------------- 293 (493)
.+..++.|-++|+...+.+++. +..-+.++.-|-|||+...|- |.
T Consensus 410 ai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~ 489 (796)
T 1l5w_A 410 CVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKF 489 (796)
T ss_dssp HHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGG
T ss_pred HHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhc
Confidence 3567899999999999988641 223356899999999887661 21
Q ss_pred ccc--------------chh----hhhhhCCCCC-CcEEEEEecccccccChHH-HHHHHHHHHh--hC-----CCeEEE
Q 039338 294 LSL--------------GQS----FRSRIGIPKN-ASLVLGVAGRLVKDKGHPL-LHEAFSKLMV--KY-----PDVYLI 346 (493)
Q Consensus 294 ~~~--------------~~~----~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~-ll~a~~~l~~--~~-----~~~~l~ 346 (493)
.++ +.. +++++|++-+ +.+.++++.|+..+|++++ ++..+.++.+ .+ .+++++
T Consensus 490 ~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~I 569 (796)
T 1l5w_A 490 ADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFL 569 (796)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEE
Confidence 000 111 3556777543 2388899999999999999 8888877754 12 369999
Q ss_pred EEeCCCc--HHH------Hhh----------hcC--cEEEecCCCHHHHHHHHHHcCEEEeCCCC-CCCCChHHHHHHHc
Q 039338 347 VAGSGPW--EQR------YKD----------FGH--QVLVMGSMSPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMMS 405 (493)
Q Consensus 347 i~G~g~~--~~~------~~~----------l~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~~-~eg~~~~~~EAm~~ 405 (493)
+.|.+.. ... +.+ ..+ +|.|+...+-+-...++++||+.++||.. .|.+|+.-+-+|..
T Consensus 570 f~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N 649 (796)
T 1l5w_A 570 FGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN 649 (796)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT
T ss_pred EEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence 9998642 111 112 224 79999988878888899999999999971 49999999999999
Q ss_pred CCcEEecCCCCCccceeee--CcceEEECCCHHHHHHHHH------HHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338 406 GKPVMASRFPSIKGTIVVD--DEFGFMFAPNVESLHKTLE------AAVSEGPMRLAQRGEACRQYAASMFTANKMALAY 477 (493)
Q Consensus 406 G~PvI~s~~~~~~~e~v~~--~~~G~~~~~d~~~l~~~i~------~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~ 477 (493)
|.+.|++-.|... |+.+. .+||++|..+++++.+.-. .+..+.+ .++++.. ..+...|||+.- ..|
T Consensus 650 GaL~iGtLDGanv-Ei~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd---~~~~g~fs~~~~-~~y 723 (796)
T 1l5w_A 650 GALTVGTLDGANV-EIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDK-VLDAVLK---ELESGKYSDGDK-HAF 723 (796)
T ss_dssp TCEEEECSCTTHH-HHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCH-HHHHHHH---HHHHTTTTTTCT-TTT
T ss_pred CCeeecCcCCeee-ehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhcCH-HHHHHHH---HHHcCCCCCCcH-HHH
Confidence 9999988777766 55433 5799999887777663221 2232213 3333333 334566999875 779
Q ss_pred HHHHHHHhh
Q 039338 478 ERLFLCIKN 486 (493)
Q Consensus 478 ~~~~~~i~~ 486 (493)
.++|+.+++
T Consensus 724 ~~Ly~~L~~ 732 (796)
T 1l5w_A 724 DQMLHSIGK 732 (796)
T ss_dssp HHHHHHTST
T ss_pred HHHHHHHhc
Confidence 999999865
No 52
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.12 E-value=1e-09 Score=112.64 Aligned_cols=231 Identities=14% Similarity=0.151 Sum_probs=163.3
Q ss_pred hhccCCeEEEcChhHHHHHHHH-----hCCCCCcEEEecCCccCCCc----cCCcc------------------------
Q 039338 249 FFNKYAHHVAISDSCGEMLRDV-----YQIPSERVHVILNGINENEY----GVDLS------------------------ 295 (493)
Q Consensus 249 ~~~~~d~ii~~S~~~~~~~~~~-----~~~~~~~v~vi~ngvd~~~~----~~~~~------------------------ 295 (493)
.+..++.|-++|+-..+.+++. +...++++.-|-|||+...| .|...
T Consensus 434 ai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y 513 (824)
T 2gj4_A 434 CIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSY 513 (824)
T ss_dssp HHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGG
T ss_pred HHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhc
Confidence 3567899999999988887532 22336789999999998888 22100
Q ss_pred ---c-------------chh----hhhhhCCCCC-CcEEEEEecccccccChHHH-HHHHHHHHh--hCC-----CeEEE
Q 039338 296 ---L-------------GQS----FRSRIGIPKN-ASLVLGVAGRLVKDKGHPLL-HEAFSKLMV--KYP-----DVYLI 346 (493)
Q Consensus 296 ---~-------------~~~----~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~l-l~a~~~l~~--~~~-----~~~l~ 346 (493)
. +.. ++++.|++-+ +.+.++++.|+..+|+.+++ +..+.++.+ ..| +++++
T Consensus 514 ~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~I 593 (824)
T 2gj4_A 514 VDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVM 593 (824)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEE
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEE
Confidence 0 011 3344676533 23889999999999999997 788777742 333 57999
Q ss_pred EEeCCCc-HHH-------Hhhh----------cC--cEEEecCCCHHHHHHHHHHcCEEEeCCCC-CCCCChHHHHHHHc
Q 039338 347 VAGSGPW-EQR-------YKDF----------GH--QVLVMGSMSPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMMS 405 (493)
Q Consensus 347 i~G~g~~-~~~-------~~~l----------~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~~-~eg~~~~~~EAm~~ 405 (493)
+.|.+.. ... +.++ .+ +|.|+...+-+-...++++||+.++||.. .|.+|+.-+-||..
T Consensus 594 f~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN 673 (824)
T 2gj4_A 594 IGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN 673 (824)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT
T ss_pred EEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence 9998642 111 2222 24 79999988878888899999999999971 49999999999999
Q ss_pred CCcEEecCCCCCccceee--eCcceEEECCCHHHHHHHH-------HHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 039338 406 GKPVMASRFPSIKGTIVV--DDEFGFMFAPNVESLHKTL-------EAAVSEGPMRLAQRGEACRQYAASMFTANKMALA 476 (493)
Q Consensus 406 G~PvI~s~~~~~~~e~v~--~~~~G~~~~~d~~~l~~~i-------~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 476 (493)
|.+.|++--|... |+.+ ..+||++|...++++ .++ ..+.+. .+.++++.++ .+...|+|..- +.
T Consensus 674 GaLtigtlDGanv-Ei~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~-~~~l~~v~d~---i~~g~fs~~~~-~~ 746 (824)
T 2gj4_A 674 GALTIGTMDGANV-EMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDR-IPELRQIIEQ---LSSGFFSPKQP-DL 746 (824)
T ss_dssp TCEEEECSCTTHH-HHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHH-CHHHHHHHHH---HHHTTTCTTST-TT
T ss_pred CceEEEEecCccc-hhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcC-CHHHHHHHHH---HHhCCCCCCCh-HH
Confidence 9999998776665 5543 467999999766666 443 234444 3344444333 34566999876 77
Q ss_pred HHHHHHHHhh
Q 039338 477 YERLFLCIKN 486 (493)
Q Consensus 477 ~~~~~~~i~~ 486 (493)
|..+|+++++
T Consensus 747 y~~ly~~l~~ 756 (824)
T 2gj4_A 747 FKDIVNMLMH 756 (824)
T ss_dssp THHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 8888888864
No 53
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.08 E-value=7.7e-10 Score=113.07 Aligned_cols=232 Identities=14% Similarity=0.114 Sum_probs=161.3
Q ss_pred hhccCCeEEEcChhHHHHHHH-----HhCCCCCcEEEecCCccCCCcc----CC--------------------------
Q 039338 249 FFNKYAHHVAISDSCGEMLRD-----VYQIPSERVHVILNGINENEYG----VD-------------------------- 293 (493)
Q Consensus 249 ~~~~~d~ii~~S~~~~~~~~~-----~~~~~~~~v~vi~ngvd~~~~~----~~-------------------------- 293 (493)
.+..++.|-++|+...+.++. .+..-+.++.-|-|||+...|- |.
T Consensus 399 ai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~ 478 (796)
T 2c4m_A 399 ACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRS 478 (796)
T ss_dssp HHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGG
T ss_pred HHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHh
Confidence 355689999999999988874 1233457899999999998882 21
Q ss_pred -ccc--------------chh----hhhhhCCCCC-CcEEEEEecccccccChHH-HHHHHHHHHh--hC-----CCeEE
Q 039338 294 -LSL--------------GQS----FRSRIGIPKN-ASLVLGVAGRLVKDKGHPL-LHEAFSKLMV--KY-----PDVYL 345 (493)
Q Consensus 294 -~~~--------------~~~----~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~-ll~a~~~l~~--~~-----~~~~l 345 (493)
.++ +.. +++++|++-+ +.+.++++.|+..+|++++ ++..+.++.+ ++ .++++
T Consensus 479 ~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~ 558 (796)
T 2c4m_A 479 YADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTV 558 (796)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEE
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEE
Confidence 000 112 3556676543 2388899999999999999 8888887764 22 36999
Q ss_pred EEEeCCCc--HHH------Hhh----------hcC--cEEEecCCCHHHHHHHHHHcCEEEeCCCC-CCCCChHHHHHHH
Q 039338 346 IVAGSGPW--EQR------YKD----------FGH--QVLVMGSMSPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMM 404 (493)
Q Consensus 346 ~i~G~g~~--~~~------~~~----------l~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~~-~eg~~~~~~EAm~ 404 (493)
++.|.+.. ... +.+ ..+ +|.|+...+-+-...++++||+.++||.. .|.+|+.-+-+|.
T Consensus 559 If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~ 638 (796)
T 2c4m_A 559 IFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMM 638 (796)
T ss_dssp EEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHH
T ss_pred EEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHH
Confidence 99998642 111 111 225 79999988878888899999999999971 4999999999999
Q ss_pred cCCcEEecCCCCCccceeee--CcceEEECC---CHHHHHHH--HHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338 405 SGKPVMASRFPSIKGTIVVD--DEFGFMFAP---NVESLHKT--LEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY 477 (493)
Q Consensus 405 ~G~PvI~s~~~~~~~e~v~~--~~~G~~~~~---d~~~l~~~--i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~ 477 (493)
.|.+.|++-.|... |+.+. .+||++|.. +++++... -..+..+.+ .++++..+ .+...|+|+.- ..|
T Consensus 639 NGaL~iGtLDGanv-Ei~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~-~~~~vvd~---~~~g~fs~~~~-~~y 712 (796)
T 2c4m_A 639 NGALTLGTMDGANV-EIVDSVGEENAYIFGARVEELPALRESYKPYELYETVP-GLKRALDA---LDNGTLNDNNS-GLF 712 (796)
T ss_dssp TTCEEEEESSTHHH-HHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHST-THHHHHHT---TTSSSSCCTTC-CHH
T ss_pred cCCeEEeccCCeEe-ehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcCH-HHHHHHHH---HHcCCCCCCCH-HHH
Confidence 99999988766666 55433 579999986 44444432 111222212 23333222 23456888776 779
Q ss_pred HHHHHHHhh
Q 039338 478 ERLFLCIKN 486 (493)
Q Consensus 478 ~~~~~~i~~ 486 (493)
.++|+.+++
T Consensus 713 ~~Ly~~L~~ 721 (796)
T 2c4m_A 713 YDLKHSLIH 721 (796)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHh
Confidence 999999874
No 54
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=98.92 E-value=5.8e-06 Score=82.22 Aligned_cols=189 Identities=14% Similarity=0.052 Sum_probs=108.1
Q ss_pred HhhccCCeEEEcChhHHH-HH----HHHhCCCCCcEEEecCCccCCCccCC-c---ccchhhhhhhCCCCCCcEEEEEec
Q 039338 248 RFFNKYAHHVAISDSCGE-ML----RDVYQIPSERVHVILNGINENEYGVD-L---SLGQSFRSRIGIPKNASLVLGVAG 318 (493)
Q Consensus 248 ~~~~~~d~ii~~S~~~~~-~~----~~~~~~~~~~v~vi~ngvd~~~~~~~-~---~~~~~~r~~~~i~~~~~~~i~~~G 318 (493)
..++.++.+++.|-...+ .. .+... +..++..|..-.... -... . .......+.+.-.++++.+++..|
T Consensus 207 ~~~~~~~~~l~nt~~ele~~~~~~l~~~~~-p~~~v~~vGpl~~~~-~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~G 284 (463)
T 2acv_A 207 ERFRDTKGIIVNTFSDLEQSSIDALYDHDE-KIPPIYAVGPLLDLK-GQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFG 284 (463)
T ss_dssp HHHTTSSEEEESCCHHHHHHHHHHHHHHCT-TSCCEEECCCCCCSS-CCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECC
T ss_pred HhcccCCEEEECCHHHHhHHHHHHHHhccc-cCCcEEEeCCCcccc-cccccccccccchhHHHHHhcCCCCceEEEEec
Confidence 445778888777644333 22 22110 134566665322111 0010 0 111233444444445558888899
Q ss_pred ccccccChHHHHHHHHHHHhhCCCeEEEE-EeCC--Cc-HHHHhhh--cCcEEEecCCCHHHHHHHHH--HcCEEEeCCC
Q 039338 319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIV-AGSG--PW-EQRYKDF--GHQVLVMGSMSPAELRAFYN--AIDIFVNPTL 390 (493)
Q Consensus 319 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-~G~g--~~-~~~~~~l--~~~V~~~g~~~~~~~~~~~~--~adv~v~ps~ 390 (493)
+....-+.+.+.+++..+.+. +.++++ +|.+ .. ....+.. .+++.+.+++|+. ++++ ++|++|.
T Consensus 285 S~~~~~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~---~vL~h~~~~~fvt--- 356 (463)
T 2acv_A 285 SMGVSFGPSQIREIALGLKHS--GVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQV---EVLAHKAIGGFVS--- 356 (463)
T ss_dssp SSCCCCCHHHHHHHHHHHHHH--TCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHH---HHHHSTTEEEEEE---
T ss_pred cccccCCHHHHHHHHHHHHhC--CCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHH---HHhCCCccCeEEe---
Confidence 887322334444444444433 355554 4543 11 1222233 5789999999865 4576 6778884
Q ss_pred CCCCCChHHHHHHHcCCcEEecCCCCCcc---ce-eeeCcceEEE-C-------C-CHHHHHHHHHHHHHc
Q 039338 391 RPQGLDLTLMEAMMSGKPVMASRFPSIKG---TI-VVDDEFGFMF-A-------P-NVESLHKTLEAAVSE 448 (493)
Q Consensus 391 ~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~-v~~~~~G~~~-~-------~-d~~~l~~~i~~ll~~ 448 (493)
+ |-.++++||+++|+|+|+....+-.. .. ++.-+.|+.+ . . +.+++.++|.+++++
T Consensus 357 h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~ 425 (463)
T 2acv_A 357 H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK 425 (463)
T ss_dssp C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT
T ss_pred c--CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhc
Confidence 3 33579999999999999987633210 23 4567788888 2 4 789999999999964
No 55
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=98.87 E-value=1e-06 Score=88.19 Aligned_cols=146 Identities=14% Similarity=0.114 Sum_probs=94.2
Q ss_pred CCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEE-eCCC-------c-HHHHhhhcCcEEEecCCCHHHHHHH
Q 039338 308 KNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-------W-EQRYKDFGHQVLVMGSMSPAELRAF 378 (493)
Q Consensus 308 ~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-------~-~~~~~~l~~~V~~~g~~~~~~~~~~ 378 (493)
++++.+++..|+... ...+.+.+.+..+.+. +.+++++ |... . ....+...+++.+.+++|+. ++
T Consensus 293 ~~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~---~~ 366 (482)
T 2pq6_A 293 EPGSVVYVNFGSTTV-MTPEQLLEFAWGLANC--KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD---KV 366 (482)
T ss_dssp CTTCEEEEECCSSSC-CCHHHHHHHHHHHHHT--TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHH---HH
T ss_pred CCCceEEEecCCccc-CCHHHHHHHHHHHHhc--CCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHH---HH
Confidence 344578888898753 2334444444444432 4565554 4321 1 22233456899999999865 47
Q ss_pred HHHcCE--EEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceee-eCcceEEECC--CHHHHHHHHHHHHHcCc
Q 039338 379 YNAIDI--FVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVV-DDEFGFMFAP--NVESLHKTLEAAVSEGP 450 (493)
Q Consensus 379 ~~~adv--~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~-~~~~G~~~~~--d~~~l~~~i~~ll~~~~ 450 (493)
++.+++ +| + + .| .++++||+++|+|+|+....+-.. ..+. +-+.|+.++. +.+++.++|.+++++ +
T Consensus 367 L~h~~~~~~v--t-h-~G-~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~-~ 440 (482)
T 2pq6_A 367 LNHPSIGGFL--T-H-CG-WNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAG-D 440 (482)
T ss_dssp HTSTTEEEEE--E-C-CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTS-H
T ss_pred hcCCCCCEEE--e-c-CC-cchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcC-C
Confidence 877666 55 3 2 33 569999999999999997643210 1233 5678888864 899999999999988 5
Q ss_pred HHHHHHHHHHHHHHHH
Q 039338 451 MRLAQRGEACRQYAAS 466 (493)
Q Consensus 451 ~~~~~~~~~~~~~~~~ 466 (493)
+ .+++++++++..+.
T Consensus 441 ~-~~~~r~~a~~l~~~ 455 (482)
T 2pq6_A 441 K-GKKMKQKAMELKKK 455 (482)
T ss_dssp H-HHHHHHHHHHHHHH
T ss_pred c-HHHHHHHHHHHHHH
Confidence 4 35666666665544
No 56
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=98.73 E-value=6.5e-05 Score=74.95 Aligned_cols=131 Identities=12% Similarity=-0.032 Sum_probs=80.7
Q ss_pred CCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEE-eCCCc-----------HHHH-hhhcCc---------EEE
Q 039338 309 NASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGPW-----------EQRY-KDFGHQ---------VLV 366 (493)
Q Consensus 309 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~~-----------~~~~-~~l~~~---------V~~ 366 (493)
+++.+++..|+... ...+.+.+.+..+.+. +.+++++ |.+.. ...+ ..+.++ +.+
T Consensus 267 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v 343 (480)
T 2vch_A 267 LGSVLYVSFGSGGT-LTCEQLNELALGLADS--EQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVI 343 (480)
T ss_dssp TTCEEEEECTTTCC-CCHHHHHHHHHHHHHT--TCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEE
T ss_pred CCceEEEecccccC-CCHHHHHHHHHHHHhc--CCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEE
Confidence 44578889999863 2345555555555443 4555544 43210 0111 123333 456
Q ss_pred ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ce-eeeCcceEEEC-----C-CHH
Q 039338 367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TI-VVDDEFGFMFA-----P-NVE 436 (493)
Q Consensus 367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~-v~~~~~G~~~~-----~-d~~ 436 (493)
.+++|+. ++++.+++.++-+ + .| -++++||+++|+|+|+-...+-.. .. ++.-+.|+.++ . +.+
T Consensus 344 ~~w~Pq~---~vL~h~~v~~fvt-H-gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~ 417 (480)
T 2vch_A 344 PFWAPQA---QVLAHPSTGGFLT-H-CG-WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRRE 417 (480)
T ss_dssp ESCCCHH---HHHHSTTEEEEEE-C-CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHH
T ss_pred eCccCHH---HHhCCCCcCeEEe-c-cc-chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHH
Confidence 6799864 7889899644434 2 34 469999999999999987643110 12 34566777664 3 789
Q ss_pred HHHHHHHHHHHc
Q 039338 437 SLHKTLEAAVSE 448 (493)
Q Consensus 437 ~l~~~i~~ll~~ 448 (493)
++.++|.+++.+
T Consensus 418 ~l~~av~~vl~~ 429 (480)
T 2vch_A 418 EVARVVKGLMEG 429 (480)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHhcC
Confidence 999999999984
No 57
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=98.73 E-value=1.1e-05 Score=79.51 Aligned_cols=204 Identities=13% Similarity=0.027 Sum_probs=117.4
Q ss_pred HhhccCCeEEEcChhHHHH-HHHHh-CCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccC
Q 039338 248 RFFNKYAHHVAISDSCGEM-LRDVY-QIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKG 325 (493)
Q Consensus 248 ~~~~~~d~ii~~S~~~~~~-~~~~~-~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg 325 (493)
..+.+++.+++.|-...+. ..+.+ .. ..++..|..-..... ...........+.++-.++++.+++..|+.... .
T Consensus 211 ~~~~~~~~vl~ns~~eLE~~~~~~~~~~-~~~v~~vGPl~~~~~-~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~-~ 287 (454)
T 3hbf_A 211 LELPRANAVAINSFATIHPLIENELNSK-FKLLLNVGPFNLTTP-QRKVSDEHGCLEWLDQHENSSVVYISFGSVVTP-P 287 (454)
T ss_dssp HHGGGSSCEEESSCGGGCHHHHHHHHTT-SSCEEECCCHHHHSC-CSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCC-C
T ss_pred HhhccCCEEEECChhHhCHHHHHHHHhc-CCCEEEECCcccccc-cccccchHHHHHHHhcCCCCceEEEecCCCCcC-C
Confidence 4567899999998765442 11111 11 135555543221100 000111223444554444556788889988642 2
Q ss_pred hHHHHHHHHHHHhhCCCeEEEE-EeCCCc----HHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHH
Q 039338 326 HPLLHEAFSKLMVKYPDVYLIV-AGSGPW----EQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLM 400 (493)
Q Consensus 326 ~~~ll~a~~~l~~~~~~~~l~i-~G~g~~----~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~ 400 (493)
.+.+.+.+..+.+. +.++++ +|.+.. ....++..+++.+.+++|+. .+++.+++.++-+ + .| .++++
T Consensus 288 ~~~~~el~~~l~~~--~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq~---~vL~h~~v~~fvt-H-~G-~~S~~ 359 (454)
T 3hbf_A 288 PHELTALAESLEEC--GFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQV---EILKHSSVGVFLT-H-SG-WNSVL 359 (454)
T ss_dssp HHHHHHHHHHHHHH--CCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCCHH---HHHHSTTEEEEEE-C-CC-HHHHH
T ss_pred HHHHHHHHHHHHhC--CCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCCHH---HHHhhcCcCeEEe-c-CC-cchHH
Confidence 34444444445443 344444 443221 11223345789999999864 7788899544434 3 34 46999
Q ss_pred HHHHcCCcEEecCCCCCcc---ceeeeC-cceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Q 039338 401 EAMMSGKPVMASRFPSIKG---TIVVDD-EFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEACRQYA 464 (493)
Q Consensus 401 EAm~~G~PvI~s~~~~~~~---e~v~~~-~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 464 (493)
||+++|+|+|+-...+-.. ..+++. +.|+.++. +.+++.++|.+++++ + ..+++++++++..
T Consensus 360 Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~-~-~~~~~r~~a~~l~ 428 (454)
T 3hbf_A 360 ECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSS-E-KGGIMRQKIVKLK 428 (454)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSS-H-HHHHHHHHHHHHH
T ss_pred HHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCC-C-hHHHHHHHHHHHH
Confidence 9999999999987533110 234453 78888764 789999999999976 3 3345555555543
No 58
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=98.70 E-value=7.2e-07 Score=85.44 Aligned_cols=108 Identities=12% Similarity=0.091 Sum_probs=78.6
Q ss_pred chhhhhhhCCCCCCcEEEEEecc-cccccChH--HHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc--------Cc-E
Q 039338 297 GQSFRSRIGIPKNASLVLGVAGR-LVKDKGHP--LLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG--------HQ-V 364 (493)
Q Consensus 297 ~~~~r~~~~i~~~~~~~i~~~Gr-~~~~Kg~~--~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~--------~~-V 364 (493)
.+.+++.+|++.+++++++..|. ..+.|.+. .+.+++..|.++ ++++++.|...+.+..+++. .+ +
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~ 244 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKDHEAGNEILAALNTEQQAWCR 244 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEE
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhhHHHHHHHHHhhhhccccceE
Confidence 34566778887566677778887 55666654 888888888765 68899998766655444432 13 4
Q ss_pred EEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEec
Q 039338 365 LVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS 412 (493)
Q Consensus 365 ~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s 412 (493)
.+.|..+-.++.++++.||++|... + | .+-.|.++|+|+|+-
T Consensus 245 ~l~g~~sl~e~~ali~~a~l~I~~D----s-g-~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 245 NLAGETQLDQAVILIAACKAIVTND----S-G-LMHVAAALNRPLVAL 286 (348)
T ss_dssp ECTTTSCHHHHHHHHHTSSEEEEES----S-H-HHHHHHHTTCCEEEE
T ss_pred eccCcCCHHHHHHHHHhCCEEEecC----C-H-HHHHHHHcCCCEEEE
Confidence 6778888899999999999999643 2 2 333399999999985
No 59
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=98.69 E-value=7.5e-06 Score=81.19 Aligned_cols=200 Identities=15% Similarity=0.030 Sum_probs=116.6
Q ss_pred hhccCCeEEEcChhHHHH-----HHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccc
Q 039338 249 FFNKYAHHVAISDSCGEM-----LRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKD 323 (493)
Q Consensus 249 ~~~~~d~ii~~S~~~~~~-----~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~ 323 (493)
..++++.+++.|....+. ++..+ .++..|..-..... ...........+.++..++++.+++..|+....
T Consensus 210 ~~~~~~~vl~ns~~~le~~~~~~~~~~~----~~~~~vGpl~~~~~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~ 284 (456)
T 2c1x_A 210 VLPKATAVFINSFEELDDSLTNDLKSKL----KTYLNIGPFNLITP-PPVVPNTTGCLQWLKERKPTSVVYISFGTVTTP 284 (456)
T ss_dssp HGGGSSCEEESSCGGGCHHHHHHHHHHS----SCEEECCCHHHHC----------CHHHHHHTSCTTCEEEEECCSSCCC
T ss_pred hhhhCCEEEECChHHHhHHHHHHHHhcC----CCEEEecCcccCcc-cccccchhhHHHHHhcCCCcceEEEecCccccC
Confidence 356789999988655443 24422 25555543211000 000000112334444344555888889988643
Q ss_pred cChHHHHHHHHHHHhhCCCeEE-EEEeCCCc----HHHHhhhcCcEEEecCCCHHHHHHHHH--HcCEEEeCCCCCCCCC
Q 039338 324 KGHPLLHEAFSKLMVKYPDVYL-IVAGSGPW----EQRYKDFGHQVLVMGSMSPAELRAFYN--AIDIFVNPTLRPQGLD 396 (493)
Q Consensus 324 Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~----~~~~~~l~~~V~~~g~~~~~~~~~~~~--~adv~v~ps~~~eg~~ 396 (493)
..+.+.+.+..+.+. +.++ +.+|.... ....+...+++.+.+++|+. ++++ ++|++|. + .| .
T Consensus 285 -~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~---~vL~h~~~~~fvt---h-~G-~ 353 (456)
T 2c1x_A 285 -PPAEVVALSEALEAS--RVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQA---EVLAHEAVGAFVT---H-CG-W 353 (456)
T ss_dssp -CHHHHHHHHHHHHHH--TCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHH---HHHTSTTEEEEEE---C-CC-H
T ss_pred -CHHHHHHHHHHHHhc--CCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHH---HHhcCCcCCEEEe---c-CC-c
Confidence 234444444444433 3344 44554321 11223345789999999864 5688 6788884 3 33 5
Q ss_pred hHHHHHHHcCCcEEecCCCCCcc---ceeeeC-cceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Q 039338 397 LTLMEAMMSGKPVMASRFPSIKG---TIVVDD-EFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEACRQYAAS 466 (493)
Q Consensus 397 ~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~-~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 466 (493)
++++||+++|+|+|+....+-.. ..+.+. +.|+.++. +.+++.++|.+++++ ++ .+++++++++..+.
T Consensus 354 ~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~-~~-~~~~r~~a~~l~~~ 428 (456)
T 2c1x_A 354 NSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQ-EK-GKKLRENLRALRET 428 (456)
T ss_dssp HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHS-HH-HHHHHHHHHHHHHH
T ss_pred chHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCC-Cc-HHHHHHHHHHHHHH
Confidence 69999999999999987543110 245555 78888863 789999999999988 54 45666666655443
No 60
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.61 E-value=2.6e-07 Score=84.84 Aligned_cols=240 Identities=11% Similarity=0.059 Sum_probs=130.1
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY 163 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (493)
|||+|.+..-+. ...|.-.++..||++|. +|.+++..... ...+. .+.+ +.....
T Consensus 1 mki~ir~Da~~~--IG~GHvmRcl~LA~~l~----~v~F~~~~~~~---~~~~~--------~g~~-v~~l~~------- 55 (282)
T 3hbm_A 1 MKVLFRSDSSSQ--IGFGHIKRDLVLAKQYS----DVSFACLPLEG---SLIDE--------IPYP-VYELSS------- 55 (282)
T ss_dssp CCEEEEECCBTT--TBSHHHHHHHHHHTTCS----SEEEEECCCTT---CCGGG--------CCSC-EEECSS-------
T ss_pred CEEEEEEecCCC--ccccHHHHHHHHHHHHH----hCEEEEecCcH---hHHHH--------CCCe-EEEcCc-------
Confidence 899999996543 55677778888888887 78888755332 11111 1111 111111
Q ss_pred ccchHHHHHHhcCCCCcEEEeCccchhHHhh----hc-cCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338 164 SKGWEQFDEENQREPFDVVHSESVALPHWLA----RN-VTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG 238 (493)
Q Consensus 164 ~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~----~~-~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (493)
.....+...+++.++|+|++.++.+..... .. .. .+..+-|..
T Consensus 56 -~d~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~-~i~~iDD~~------------------------------ 103 (282)
T 3hbm_A 56 -ESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGV-KILSFDDEI------------------------------ 103 (282)
T ss_dssp -SCHHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHCC-EEEEECSSC------------------------------
T ss_pred -cCHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcCc-EEEEEecCC------------------------------
Confidence 122445555556689999987764333221 11 12 344454421
Q ss_pred HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhC--CCCCcEEEecCCccCCCccCCcccchhhhhhh-CCCCCCcEEEE
Q 039338 239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQ--IPSERVHVILNGINENEYGVDLSLGQSFRSRI-GIPKNASLVLG 315 (493)
Q Consensus 239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~--~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~-~i~~~~~~~i~ 315 (493)
+ -..||.++-.+..... ..|. +|....... |.+.... . +++.+.- ...++.+.+++
T Consensus 104 ---------~-~~~~Dllin~~~~~~~---~~Y~~~~p~~~~~l~--G~~Y~~l---R---~eF~~~~~~~r~~~~~ILv 162 (282)
T 3hbm_A 104 ---------K-PHHCDILLNVNAYAKA---SDYEGLVPFKCEVRC--GFSYALI---R---EEFYQEAKENRKKKYDFFI 162 (282)
T ss_dssp ---------C-CCCCSEEEECSTTCCG---GGGTTTCC-CCEEEE--SGGGCCC---C---HHHHHHTTCCCCCCEEEEE
T ss_pred ---------C-cccCCEEEeCCcccch---hhccccCCCCCeEee--CCccccc---C---HHHHHhhhhccccCCeEEE
Confidence 0 1246777766543321 1131 232222233 3321111 1 1111110 01223345667
Q ss_pred EecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCC-cHHHHhhh---cCcEEEecCCCHHHHHHHHHHcCEEEeCCCC
Q 039338 316 VAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP-WEQRYKDF---GHQVLVMGSMSPAELRAFYNAIDIFVNPTLR 391 (493)
Q Consensus 316 ~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~-~~~~~~~l---~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~ 391 (493)
++|..+...-...++++ +.+. ..+ .++.|.+. ..+.+++. ..++.+.+++ +++.++|++||++|.+
T Consensus 163 ~~GG~d~~~l~~~vl~~---L~~~-~~i-~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~--~~m~~~m~~aDlvI~~--- 232 (282)
T 3hbm_A 163 CMGGTDIKNLSLQIASE---LPKT-KII-SIATSSSNPNLKKLQKFAKLHNNIRLFIDH--ENIAKLMNESNKLIIS--- 232 (282)
T ss_dssp ECCSCCTTCHHHHHHHH---SCTT-SCE-EEEECTTCTTHHHHHHHHHTCSSEEEEESC--SCHHHHHHTEEEEEEE---
T ss_pred EECCCchhhHHHHHHHH---hhcC-CCE-EEEECCCchHHHHHHHHHhhCCCEEEEeCH--HHHHHHHHHCCEEEEC---
Confidence 88876544333344444 3332 233 45667653 34444432 2589999998 6999999999999972
Q ss_pred CCCCChHHHHHHHcCCcEEecCC
Q 039338 392 PQGLDLTLMEAMMSGKPVMASRF 414 (493)
Q Consensus 392 ~eg~~~~~~EAm~~G~PvI~s~~ 414 (493)
. |.|+.|++++|+|.|....
T Consensus 233 -g--G~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 233 -A--SSLVNEALLLKANFKAICY 252 (282)
T ss_dssp -S--SHHHHHHHHTTCCEEEECC
T ss_pred -C--cHHHHHHHHcCCCEEEEeC
Confidence 2 4799999999999998754
No 61
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.38 E-value=1.9e-05 Score=83.27 Aligned_cols=186 Identities=12% Similarity=0.156 Sum_probs=113.7
Q ss_pred hccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccC--CcccchhhhhhhCCCCCCcEEEEEeccccccc---
Q 039338 250 FNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGV--DLSLGQSFRSRIGIPKNASLVLGVAGRLVKDK--- 324 (493)
Q Consensus 250 ~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~--~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~K--- 324 (493)
..+.|.+++.|+...+.+.+.++++..++.....+-....+.. .......++++++++.++ .+|+|+-.+....
T Consensus 476 ~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~k-k~ILyaPT~r~~~~~~ 554 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDK-KVIMYAPTWRDDEFVS 554 (729)
T ss_dssp HTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSC-EEEEECCCCCGGGCCG
T ss_pred hccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCC-eEEEEeeeeeCCcccc
Confidence 5678999999999999999988887666655544322222211 122345688899998877 6677998776531
Q ss_pred -C-----hHHHHHHHHHHHhhCCCeEEEEEeCCCcHHH--HhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCC
Q 039338 325 -G-----HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQR--YKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLD 396 (493)
Q Consensus 325 -g-----~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~--~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~ 396 (493)
| ...-++.+.+... .+..+++-......+. .....+.+...... .++.+++..||++|. -++
T Consensus 555 ~~~~~~~~~~~~~~l~~~l~--~~~~li~r~Hp~~~~~~~~~~~~~~~~~~~~~--~di~~ll~~aD~lIT------DyS 624 (729)
T 3l7i_A 555 KGKYLFELKIDLDNLYKELG--DDYVILLRMHYLISNALDLSGYENFAIDVSNY--NDVSELFLISDCLIT------DYS 624 (729)
T ss_dssp GGSSCCCCTTCHHHHHHHHT--TTEEEEECCCHHHHTTCCCTTCTTTEEECTTC--SCHHHHHHTCSEEEE------SSC
T ss_pred ccccccchhhHHHHHHHHcC--CCeEEEEecCcchhccccccccCCcEEeCCCC--cCHHHHHHHhCEEEe------ech
Confidence 1 1112333333222 4677776553211111 11122444444433 589999999999994 245
Q ss_pred hHHHHHHHcCCcEEecCCC---------CCccceeeeCcceEEECCCHHHHHHHHHHHHHc
Q 039338 397 LTLMEAMMSGKPVMASRFP---------SIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSE 448 (493)
Q Consensus 397 ~~~~EAm~~G~PvI~s~~~---------~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~ 448 (493)
.+++|++..++|||..... |.--+ ..+...|-++. +.++|.++|.+....
T Consensus 625 Sv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d-~~~~~pg~~~~-~~~eL~~~i~~~~~~ 683 (729)
T 3l7i_A 625 SVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMN-YMEDLPGPIYT-EPYGLAKELKNLDKV 683 (729)
T ss_dssp THHHHHGGGCCCEEEECTTTTTTTSSCCSBSSC-TTSSSSSCEES-SHHHHHHHHTTHHHH
T ss_pred HHHHhHHhhCCCEEEecCCHHHHhhccCCcccC-hhHhCCCCeEC-CHHHHHHHHhhhhcc
Confidence 6999999999999987321 11101 11223344444 889999999988764
No 62
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=98.13 E-value=0.00012 Score=69.86 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=77.3
Q ss_pred hhhhhCCCCCCcEEEEEecccccccCh--HHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc-----CcEEEecCCCH
Q 039338 300 FRSRIGIPKNASLVLGVAGRLVKDKGH--PLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG-----HQVLVMGSMSP 372 (493)
Q Consensus 300 ~r~~~~i~~~~~~~i~~~Gr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~-----~~V~~~g~~~~ 372 (493)
+..+.|++.+++++++..|.-.+.|.+ +.+.+++..+.++ +.+++++|...+.+..+++. ..+.+.|..+-
T Consensus 175 ~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl 252 (349)
T 3tov_A 175 FYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQL 252 (349)
T ss_dssp HHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCH
T ss_pred HHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCH
Confidence 344567776666777777765556664 5788888888776 56788888766666555442 34677888898
Q ss_pred HHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338 373 AELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR 413 (493)
Q Consensus 373 ~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~ 413 (493)
.++..+++.||++|.. ++ |..-+ |.++|+|+|+-=
T Consensus 253 ~e~~ali~~a~~~i~~----Ds-G~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 253 GPLAAAMNRCNLLITN----DS-GPMHV-GISQGVPIVALY 287 (349)
T ss_dssp HHHHHHHHTCSEEEEE----SS-HHHHH-HHTTTCCEEEEC
T ss_pred HHHHHHHHhCCEEEEC----CC-CHHHH-HHhcCCCEEEEE
Confidence 9999999999999963 23 33444 899999999864
No 63
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.80 E-value=0.0014 Score=61.71 Aligned_cols=130 Identities=15% Similarity=0.157 Sum_probs=81.5
Q ss_pred CcEEEEEecccccccCh--HHHHHHHHHHHhhCCCeEEEEE-eCCCcHHHHhhhc---CcEEEecCCCHHHHHHHHHHcC
Q 039338 310 ASLVLGVAGRLVKDKGH--PLLHEAFSKLMVKYPDVYLIVA-GSGPWEQRYKDFG---HQVLVMGSMSPAELRAFYNAID 383 (493)
Q Consensus 310 ~~~~i~~~Gr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~i~-G~g~~~~~~~~l~---~~V~~~g~~~~~~~~~~~~~ad 383 (493)
++++++..|.-.+.|.+ +.+.+++..+.++ ++++++. |...+.+..+++. +++.+.|..+-.++.++++.||
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCS
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCC
Confidence 34666677765556664 4778888887653 6788887 5333333344432 4677889989999999999999
Q ss_pred EEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc--------ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG--------TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 384 v~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~--------e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
++|.. ++ |..=+ |.++|+|+|+--.+..+. ..+..+... .... ++++..+++.++++.
T Consensus 256 l~I~~----DS-G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~-cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 256 FVVSV----DT-GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGN-ELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEEEE----SS-HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGG-CGGGCCHHHHHHHHHHTTTT
T ss_pred EEEec----CC-cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcc-cccCCCHHHHHHHHHHHHHH
Confidence 99963 23 33444 777999999862111110 111111111 1223 788888888887765
No 64
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=97.72 E-value=6.7e-05 Score=65.88 Aligned_cols=130 Identities=12% Similarity=0.087 Sum_probs=79.7
Q ss_pred CCCCCCcEEEEEecccccccChHHHHHHH------HHHHhhCCCeEEEE-EeCCCc---HHHHhhh--------------
Q 039338 305 GIPKNASLVLGVAGRLVKDKGHPLLHEAF------SKLMVKYPDVYLIV-AGSGPW---EQRYKDF-------------- 360 (493)
Q Consensus 305 ~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~------~~l~~~~~~~~l~i-~G~g~~---~~~~~~l-------------- 360 (493)
+.+.+.+.++++.|.. ..+..+++.+ ..+.+.. .+++++ +|.+.. ......+
T Consensus 23 ~~~~~~~~VlVtgGS~---~~~n~li~~vl~~~~l~~L~~~~-~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~ 98 (224)
T 2jzc_A 23 EGIIEEKALFVTCGAT---VPFPKLVSCVLSDEFCQELIQYG-FVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQF 98 (224)
T ss_dssp -CCCCSCCEEEECCSC---CSCHHHHHHHTSHHHHHHHHTTT-CCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTT
T ss_pred CCCCCCCEEEEEcCCc---hHHHHHHHHHHHHHHHHHHhcCC-CeEEEEEECCCchhhHHHHHHhhhccccccccccccc
Confidence 3444555778888885 3356665544 5554432 245544 575543 1111111
Q ss_pred --------------cCcEEEecCCCHHHHHHHHH-HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc------
Q 039338 361 --------------GHQVLVMGSMSPAELRAFYN-AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG------ 419 (493)
Q Consensus 361 --------------~~~V~~~g~~~~~~~~~~~~-~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~------ 419 (493)
..++...+++ +++.++|+ .||++|. + +-..+++|++++|+|.|.-..+...+
T Consensus 99 ~~~~~~~~~~~~~~~~~v~v~~f~--~~m~~~l~~~AdlvIs---h--aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~n 171 (224)
T 2jzc_A 99 GCGDTARQYVLMNGKLKVIGFDFS--TKMQSIIRDYSDLVIS---H--AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQI 171 (224)
T ss_dssp CTTCSCEEEESTTTSSEEEECCSS--SSHHHHHHHHCSCEEE---S--SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHH
T ss_pred cccccccccccccCCceEEEeecc--chHHHHHHhcCCEEEE---C--CcHHHHHHHHHhCCCEEEEcCcccccchHHHH
Confidence 1356777887 69999999 9999995 3 33569999999999999887643211
Q ss_pred -ceeeeCcceEEECCCHHHHHHHHHHHHH
Q 039338 420 -TIVVDDEFGFMFAPNVESLHKTLEAAVS 447 (493)
Q Consensus 420 -e~v~~~~~G~~~~~d~~~l~~~i~~ll~ 447 (493)
+.+.+.+.++.+ +++.|.++|.++..
T Consensus 172 A~~l~~~G~~~~~--~~~~L~~~i~~l~~ 198 (224)
T 2jzc_A 172 ADKFVELGYVWSC--APTETGLIAGLRAS 198 (224)
T ss_dssp HHHHHHHSCCCEE--CSCTTTHHHHHHHH
T ss_pred HHHHHHCCCEEEc--CHHHHHHHHHHHHh
Confidence 123333445554 55677777777633
No 65
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=96.14 E-value=0.078 Score=54.77 Aligned_cols=126 Identities=16% Similarity=0.165 Sum_probs=94.1
Q ss_pred EEEEEecccccccChHH-HHHHHHHH---Hhh-------------CCCeEEEEEeCCC-c----HHHHh---h-------
Q 039338 312 LVLGVAGRLVKDKGHPL-LHEAFSKL---MVK-------------YPDVYLIVAGSGP-W----EQRYK---D------- 359 (493)
Q Consensus 312 ~~i~~~Gr~~~~Kg~~~-ll~a~~~l---~~~-------------~~~~~l~i~G~g~-~----~~~~~---~------- 359 (493)
+.++++-|+..+|...+ ++..+.++ ++. ..++++++.|... . +..++ .
T Consensus 601 Lfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~ 680 (879)
T 1ygp_A 601 LFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNN 680 (879)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTT
T ss_pred eeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhcc
Confidence 88899999999999888 56654443 333 2468888888632 1 11111 1
Q ss_pred ---hcC--cEEEecCCCHHHHHHHHHHcCEEEeCCC-CCCCCChHHHHHHHcCCcEEecCCCCCccceeee--CcceEEE
Q 039338 360 ---FGH--QVLVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD--DEFGFMF 431 (493)
Q Consensus 360 ---l~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~-~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~--~~~G~~~ 431 (493)
..+ +|.|+...+=+-...++.+|||-.+.|. --|..|+.-+-+|.-|.+.|++--|... |+.++ .+|+++|
T Consensus 681 Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanv-Ei~e~vG~eN~fiF 759 (879)
T 1ygp_A 681 DESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANV-EITREIGEDNVFLF 759 (879)
T ss_dssp CGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHH-HHHHHHCGGGSEEE
T ss_pred ChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhH-HHHHHcCcccEEEc
Confidence 123 7999999987888889999999999665 3489999999999999999999878777 76654 5699999
Q ss_pred CCCHHHH
Q 039338 432 APNVESL 438 (493)
Q Consensus 432 ~~d~~~l 438 (493)
-.+.+++
T Consensus 760 G~~~~ev 766 (879)
T 1ygp_A 760 GNLSENV 766 (879)
T ss_dssp SCCHHHH
T ss_pred cCCHHHH
Confidence 8754444
No 66
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=93.41 E-value=3.1 Score=34.94 Aligned_cols=327 Identities=14% Similarity=0.123 Sum_probs=181.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccc
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWR 162 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (493)
.|||+++-.. +....|+..+....-..+.+.||+|+++......+....... ...-.+..+
T Consensus 1 smricifmar---glegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshd--------hksfsipvi-------- 61 (401)
T 1xv5_A 1 SMRICIFMAR---GLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRTSSHD--------HKSFSIPVI-------- 61 (401)
T ss_dssp CCEEEEEETT---CCCSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTTTSSS--------CTTTCEEEC--------
T ss_pred CceEEEEeec---cccccCceeeehhhhhhhhcCCcEEEEEEecccccccccccc--------CccccceeE--------
Confidence 3889988764 347789999999999999999999999987665521111111 111112221
Q ss_pred cccchHHHHHHhcCCCCcEEEeCccch--------hH---HhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccc
Q 039338 163 YSKGWEQFDEENQREPFDVVHSESVAL--------PH---WLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMS 229 (493)
Q Consensus 163 ~~~~~~~~~~~~~~~~~DiI~~~~~~~--------~~---~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 229 (493)
..+-+.+..+++ .+.||+++++.+. .. ++..-.| ++++.-|+.........
T Consensus 62 lakeydkalklv--ndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlslrrn-------------- 125 (401)
T 1xv5_A 62 LAKEYDKALKLV--NDCDILIINSVPATSVQEATINNYKKLLDNIKPSIRVVVYQHDHSVLSLRRN-------------- 125 (401)
T ss_dssp TTTCHHHHHHHH--TSCSEEEEEECCBTTSCHHHHHHHHHHHHHSCTTSEEEEEECCCSHHHHTTB--------------
T ss_pred ehhhhHHHhhhh--ccCcEEEEccCccchhHHHHHhhHHHHHhcCCCceEEEEEeccchhhhhhhh--------------
Confidence 112233444444 4689988876421 11 1111122 37777787433221111
Q ss_pred hHhHhHHHHHHHHHHHHHHhhccCCeEEEcChh---HHHHHHHHhCCCCCcEEEecCCccC----CCccCCcccchhhhh
Q 039338 230 LAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDS---CGEMLRDVYQIPSERVHVILNGINE----NEYGVDLSLGQSFRS 302 (493)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~---~~~~~~~~~~~~~~~v~vi~ngvd~----~~~~~~~~~~~~~r~ 302 (493)
+......+++|.++..|+. .+-.+.+.|+ +.+.... .+.. -.|+|.. +.-.+|.
T Consensus 126 --------------lgleetvrradvifshsdngdfnkvlmkewyp---etvslfd-dieeaptvynfqppm-divkvrs 186 (401)
T 1xv5_A 126 --------------LGLEETVRRADVIFSHSDNGDFNKVLMKEWYP---ETVSLFD-DIEEAPTVYNFQPPM-DIVKVRS 186 (401)
T ss_dssp --------------SSHHHHHHHCSEEEESCTTSHHHHTHHHHHSC---SSCCSSS-CCCCCCCEEECCCCB-CHHHHHH
T ss_pred --------------cChHHhhhhhceEEecCCCCcHHHHHHHhhcc---chhhhhc-chhhCCceeccCCCc-eeeeeeh
Confidence 1111345689999998863 2234445442 2221111 1110 0122221 1123333
Q ss_pred hhCCCCCC--cEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHH--HHhh-----------------hc
Q 039338 303 RIGIPKNA--SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQ--RYKD-----------------FG 361 (493)
Q Consensus 303 ~~~i~~~~--~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~--~~~~-----------------l~ 361 (493)
.+--+-.. --+=-++||-...||+..+.+.-.++.+-. .-.-++-|-..... .+++ ++
T Consensus 187 tywkdvseinmninrwigrtttwkgfyqmfdfhekflkpa-gkstvmeglerspafiaikekgipyeyygnreidkmnla 265 (401)
T 1xv5_A 187 TYWKDVSEINMNINRWIGRTTTWKGFYQMFDFHEKFLKPA-GKSTVMEGLERSPAFIAIKEKGIPYEYYGNREIDKMNLA 265 (401)
T ss_dssp HHCCCGGGCEEEEEEEECCSCGGGCHHHHHHHHHHTTTTT-TCEEEEECCCCSHHHHHHHHTTCCEEEECGGGGGGCCCS
T ss_pred hhhccHHHhhcchhhhhcccchhHhHHHHhhHHHHhcCcc-chhhhhhhhhcCCceEEEcccCCchhhcCcchhhhhcCC
Confidence 33211111 012248899999999999988777765521 12334445322211 1111 11
Q ss_pred --CcEEEecCCCHHHHHHHHHHcCEEEeCCCC-----CCCCChHHHHHHHcCCcEEecC---------CCCCccceeeeC
Q 039338 362 --HQVLVMGSMSPAELRAFYNAIDIFVNPTLR-----PQGLDLTLMEAMMSGKPVMASR---------FPSIKGTIVVDD 425 (493)
Q Consensus 362 --~~V~~~g~~~~~~~~~~~~~adv~v~ps~~-----~eg~~~~~~EAm~~G~PvI~s~---------~~~~~~e~v~~~ 425 (493)
....++.-.-..++.+-++.+.+....|.- ..++-.+-+|--+||+-.|--. +...+ +..++
T Consensus 266 pnqpaqildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntp--ltshd 343 (401)
T 1xv5_A 266 PNQPAQILDCYINSEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTP--LTSHD 343 (401)
T ss_dssp SSCCEEEESCCCHHHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCB--GGGSC
T ss_pred CCCcchhhhheecHHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCc--ccccC
Confidence 223445544468899999999998776531 2456789999999999655432 22222 11222
Q ss_pred cceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHh
Q 039338 426 EFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASM 467 (493)
Q Consensus 426 ~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~ 467 (493)
..-+.++. |.++-.+.|.++-.+ +..+.+-+++++++.-++
T Consensus 344 sgiiwfdendmestferikelssd-ralydrerekayeflyqh 385 (401)
T 1xv5_A 344 SGIIWFDENDMESTFERIKELSSD-RALYDREREKAYEFLYQH 385 (401)
T ss_dssp CSCEEECTTCHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHH
T ss_pred CceEEecCCchHHHHHHHHHhccc-hhhhhHHHHHHHHHHHhc
Confidence 22345565 999999999999888 899999889998877554
No 67
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.09 E-value=2.7 Score=41.15 Aligned_cols=121 Identities=15% Similarity=0.160 Sum_probs=65.8
Q ss_pred ccChHHHHHHHHHHHhhCCCeEEEEEeCCCc--------------------HHHHhhh----cCcEEEecCCCHHHHHH-
Q 039338 323 DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW--------------------EQRYKDF----GHQVLVMGSMSPAELRA- 377 (493)
Q Consensus 323 ~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~--------------------~~~~~~l----~~~V~~~g~~~~~~~~~- 377 (493)
.++++.+.+.+....+ +--+++|+|.|.. .++.+++ .+-+.+.|--.+.++..
T Consensus 218 ~~~i~~~~~~~g~~~~--~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 218 SNHIRSVMSELQRLEK--PYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTE 295 (461)
T ss_dssp TTTHHHHHHHTTGGGS--CCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHH
T ss_pred cchHHHHHHhhccccc--cccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhh
Confidence 4667777776654433 3346888887642 2222222 24566777776555544
Q ss_pred -HHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCc-cceeeeCcceEEECCCHHH-HHHHHHHHHH
Q 039338 378 -FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK-GTIVVDDEFGFMFAPNVES-LHKTLEAAVS 447 (493)
Q Consensus 378 -~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~-~e~v~~~~~G~~~~~d~~~-l~~~i~~ll~ 447 (493)
=+..+|+++..+...|.-=++.+-|-.+|.+=+.+...... .+++...+....+. +.. .+..|.+.+.
T Consensus 296 e~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~~gid~vis--p~~~~a~~I~~~i~ 366 (461)
T 4g65_A 296 ENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAIS--PQQATISALLTHVR 366 (461)
T ss_dssp TTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCSSSSCEEEC--HHHHHHHHHHHHHH
T ss_pred cCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhhhhccccceeeC--HHHHHHHHHHHHhh
Confidence 36889999987643233224556677888877766543221 13343333344444 333 3455555444
No 68
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=84.93 E-value=1.4 Score=39.88 Aligned_cols=47 Identities=15% Similarity=0.163 Sum_probs=31.5
Q ss_pred CCCCceEEEEEeccCCCCCCCCchHH-HHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 79 PSKFTLKIAVFSRKWPISTTPGGMER-HAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 79 ~~~~~mkIl~v~~~~p~~~~~gG~~~-~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
..++.||||+|..+ | ..++... .....++.|.+.||+|.++-.....
T Consensus 18 ~~m~~MKiLII~aH-P---~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~~~ 65 (280)
T 4gi5_A 18 LYFQSMKVLLIYAH-P---EPRSLNGALKNFAIRHLQQAGHEVQVSDLYAMR 65 (280)
T ss_dssp ----CCEEEEEECC-S---CTTSHHHHHHHHHHHHHHHTTCEEEEEETTTTT
T ss_pred chhhCCeEEEEEeC-C---CCccHHHHHHHHHHHHHHHCCCeEEEEEccccC
Confidence 35788999999885 3 3344433 3456788899999999999765444
No 69
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=84.62 E-value=1.1 Score=40.77 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=25.4
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|||++. ||.+..=..|++.|.++||+|++++..
T Consensus 1 MkILVT----------GatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG----------GGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE----------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 898765 444444566999999999999999754
No 70
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=80.89 E-value=7.1 Score=34.44 Aligned_cols=39 Identities=18% Similarity=0.222 Sum_probs=29.6
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.||||+.... |=..--+..|+++|++.| +|+|+.+..+.
T Consensus 1 ~M~ILlTNDD-------Gi~apGi~aL~~~L~~~g-~V~VVAP~~~~ 39 (254)
T 2v4n_A 1 SMRILLSNDD-------GVHAPGIQTLAKALREFA-DVQVVAPDRNR 39 (254)
T ss_dssp CCEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CCeEEEEcCC-------CCCCHHHHHHHHHHHhCC-cEEEEeeCCCC
Confidence 4899888763 223345888999998876 99999987766
No 71
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=80.44 E-value=3.6 Score=37.84 Aligned_cols=106 Identities=11% Similarity=0.112 Sum_probs=51.7
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCcc-ccCCC--CCCCCCCceEeecCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISH-QENDD--GSNNKYPLLHFHEGE 157 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~ 157 (493)
|++|||+|+.. ..+.....++|.+.||+|..+.+..+......... ...+. -...+.+ +..
T Consensus 5 ~~~mrivf~Gt-----------~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIp---v~~-- 68 (318)
T 3q0i_A 5 SQSLRIVFAGT-----------PDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVP---VYQ-- 68 (318)
T ss_dssp --CCEEEEECC-----------SHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCC---EEC--
T ss_pred ccCCEEEEEec-----------CHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCC---EEc--
Confidence 56899999975 12455566788888999887766543301110000 00000 0011111 111
Q ss_pred CCccccccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 158 ADKWRYSKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
+.... -..+.+.+++.+||++++.++. ++..+....+.-++.+|.
T Consensus 69 ~~~~~----~~~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHp 115 (318)
T 3q0i_A 69 PENFK----SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHG 115 (318)
T ss_dssp CSCSC----SHHHHHHHHTTCCSEEEESSCCSCCCHHHHTSSTTCEEEEES
T ss_pred cCcCC----CHHHHHHHHhcCCCEEEEeCccccCCHHHHhhCcCCEEEeCC
Confidence 11111 1356666778899999987652 333333332324777885
No 72
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=79.27 E-value=4 Score=32.39 Aligned_cols=46 Identities=17% Similarity=0.211 Sum_probs=34.4
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEE-EEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRV-HIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V-~v~~~~~~~ 129 (493)
...||++|+... || ...-..+..+.++.++.+.||+| .|+...+.-
T Consensus 10 ~~~~~~~ivv~~-~P--yg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV 56 (140)
T 2d1p_A 10 HGSMRFAIVVTG-PA--YGTQQASSAFQFAQALIADGHELSSVFFYREGV 56 (140)
T ss_dssp -CCCEEEEEECS-CS--SSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred CCceEEEEEEcC-CC--CCcHHHHHHHHHHHHHHHCCCccCEEEEechHH
Confidence 346999999886 33 33455667889999999999999 888766544
No 73
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=78.78 E-value=3.1 Score=36.20 Aligned_cols=106 Identities=13% Similarity=0.122 Sum_probs=53.5
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD 159 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (493)
+.|||+++.. |.+..+..+.+++.+. +++|..+.+.... ....+.- ...+.+...+ .+.
T Consensus 21 ~~~rI~~l~S---------G~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~--~~~~~~A-----~~~gIp~~~~---~~~ 81 (229)
T 3auf_A 21 HMIRIGVLIS---------GSGTNLQAILDGCREGRIPGRVAVVISDRAD--AYGLERA-----RRAGVDALHM---DPA 81 (229)
T ss_dssp TCEEEEEEES---------SCCHHHHHHHHHHHTTSSSEEEEEEEESSTT--CHHHHHH-----HHTTCEEEEC---CGG
T ss_pred CCcEEEEEEe---------CCcHHHHHHHHHHHhCCCCCeEEEEEcCCCc--hHHHHHH-----HHcCCCEEEE---Ccc
Confidence 3479999974 1123577788888876 6787666654333 1111110 0112221111 111
Q ss_pred ccccccc-hHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 160 KWRYSKG-WEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 160 ~~~~~~~-~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
.+..... -..+.+.+++.+||+|++.++. ++..+....+.-++.+|.
T Consensus 82 ~~~~r~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 82 AYPSRTAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp GSSSHHHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred cccchhhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 1111111 1345566678899999987652 333333333335777785
No 74
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=78.50 E-value=4.2 Score=31.72 Aligned_cols=43 Identities=19% Similarity=0.202 Sum_probs=32.1
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEE-EEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRV-HIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V-~v~~~~~~~ 129 (493)
||++++...=| ...-..+....++.++.+.||+| .|+.....-
T Consensus 1 mk~~iiv~~~p---~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV 44 (130)
T 2hy5_A 1 MKFALQINEGP---YQHQASDSAYQFAKAALEKGHEIFRVFFYHDGV 44 (130)
T ss_dssp CEEEEEECSCT---TTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred CEEEEEEeCCC---CCcHHHHHHHHHHHHHHhcCCeeCEEEEechHH
Confidence 78888887532 22345566889999999999999 888766544
No 75
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=77.06 E-value=5.8 Score=34.85 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=27.3
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.+++|++|+.+ |- -.+..+-.....+.++|++|.+++.....
T Consensus 2 ~~~~vL~v~aH-PD-----De~l~~Ggtia~~~~~G~~V~vv~lT~G~ 43 (242)
T 2ixd_A 2 SGLHILAFGAH-AD-----DVEIGMAGTIAKYTKQGYEVGICDLTEAD 43 (242)
T ss_dssp CCCSEEEEESS-TT-----HHHHHHHHHHHHHHHTTCCEEEEEEECCT
T ss_pred CCccEEEEEeC-CC-----hHHHhHHHHHHHHHHCCCeEEEEEEcCCC
Confidence 45789999974 32 22333334445566789999998876555
No 76
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=75.97 E-value=2.9 Score=36.92 Aligned_cols=41 Identities=15% Similarity=0.142 Sum_probs=30.3
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.++||||+.... |=..--+..|+++|.+ +|+|+|+.+....
T Consensus 9 ~~~m~ILlTNDD-------Gi~apGi~aL~~~l~~-~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 9 TPKLRLLLSNDD-------GVYAKGLAILAKTLAD-LGEVDVVAPDRNR 49 (261)
T ss_dssp --CCEEEEECSS-------CTTCHHHHHHHHHHTT-TSEEEEEEESSCC
T ss_pred CCCCeEEEEcCC-------CCCCHHHHHHHHHHHh-cCCEEEEecCCCC
Confidence 456999988764 2233458889999988 7999999987766
No 77
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=75.41 E-value=27 Score=27.26 Aligned_cols=77 Identities=10% Similarity=0.105 Sum_probs=47.7
Q ss_pred HHHHHHHHHH---cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCcc---ceeeeC-cceEEECC-CHHHHHH
Q 039338 372 PAELRAFYNA---IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIKG---TIVVDD-EFGFMFAP-NVESLHK 440 (493)
Q Consensus 372 ~~~~~~~~~~---adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~~---e~v~~~-~~G~~~~~-d~~~l~~ 440 (493)
.++..+.+.. .|++++-..-++.-|..+++.+.. ..|+|......-.+ +.+..+ ..+++..| +.++|.+
T Consensus 36 ~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~ 115 (151)
T 3kcn_A 36 GPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQMSDIKA 115 (151)
T ss_dssp HHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCCCHHHHHH
Confidence 3555555543 388776432234456667666543 56776543212110 234455 67899999 9999999
Q ss_pred HHHHHHHc
Q 039338 441 TLEAAVSE 448 (493)
Q Consensus 441 ~i~~ll~~ 448 (493)
+|..++..
T Consensus 116 ~i~~~l~~ 123 (151)
T 3kcn_A 116 AINAGIKQ 123 (151)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999876
No 78
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=75.25 E-value=7.7 Score=35.85 Aligned_cols=107 Identities=14% Similarity=0.207 Sum_probs=52.9
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK 160 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (493)
+++|||+++.. ..+...+.++|.+.||+|..+.+.++....+. .. ... -...+.+.... . .
T Consensus 20 ~~~mrIvf~G~-----------~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~-~v-~~~-A~~~gIpv~~~-~----~ 80 (329)
T 2bw0_A 20 FQSMKIAVIGQ-----------SLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD-PL-GLE-AEKDGVPVFKY-S----R 80 (329)
T ss_dssp -CCCEEEEECC-----------HHHHHHHHHHHHHTTCEEEEEEECCCCSSCCC-HH-HHH-HHHHTCCEEEC-S----C
T ss_pred CCCCEEEEEcC-----------cHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCC-HH-HHH-HHHcCCCEEec-C----c
Confidence 45699999842 33455677888888999877665443300000 00 000 00011111111 1 0
Q ss_pred ccc-ccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 161 WRY-SKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 161 ~~~-~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
+.. ......+.+.++..+||++++-++. ++..+....+.-++.+|.
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHp 129 (329)
T 2bw0_A 81 WRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHP 129 (329)
T ss_dssp CEETTEECHHHHHHHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEES
T ss_pred ccccccccHHHHHHHHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcC
Confidence 110 1112455666778899999987652 333333332334677775
No 79
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=74.55 E-value=20 Score=27.63 Aligned_cols=76 Identities=12% Similarity=0.203 Sum_probs=48.9
Q ss_pred HHHHHHHH----HcCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYN----AIDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~----~adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
++....+. ..|++++-..-++.-|..+++.+.. .+|+|........ .+.+..|..+++..| +.+++..+
T Consensus 37 ~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 116 (143)
T 3jte_A 37 TEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIA 116 (143)
T ss_dssp HHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHHHH
Confidence 55555555 4688776432234456666666543 5677654322211 134556778999999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|..++..
T Consensus 117 l~~~~~~ 123 (143)
T 3jte_A 117 INNAINR 123 (143)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 80
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=74.43 E-value=3.4 Score=35.38 Aligned_cols=108 Identities=10% Similarity=0.050 Sum_probs=54.9
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC--CEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG--HRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE 157 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (493)
.|.++||+++.. |.+..+..+.+++.+.+ ++|..+.+.... ....+.- ...+.+......
T Consensus 4 ~m~~~ri~vl~S---------G~gsnl~all~~~~~~~l~~~I~~Visn~~~--a~~l~~A-----~~~gIp~~~~~~-- 65 (209)
T 4ds3_A 4 SMKRNRVVIFIS---------GGGSNMEALIRAAQAPGFPAEIVAVFSDKAE--AGGLAKA-----EAAGIATQVFKR-- 65 (209)
T ss_dssp --CCEEEEEEES---------SCCHHHHHHHHHHTSTTCSEEEEEEEESCTT--CTHHHHH-----HHTTCCEEECCG--
T ss_pred cCCCccEEEEEE---------CCcHHHHHHHHHHHcCCCCcEEEEEEECCcc--cHHHHHH-----HHcCCCEEEeCc--
Confidence 366889999874 22345777888886643 687777665433 1111110 011222222211
Q ss_pred CCcccccc-chHHHHHHhcCCCCcEEEeCcc--chhHHhhhccCcEEEEecc
Q 039338 158 ADKWRYSK-GWEQFDEENQREPFDVVHSESV--ALPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~~DiI~~~~~--~~~~~~~~~~p~~v~~~h~ 206 (493)
..+.... .-..+.+.+++.+||+|++.++ -++..+....+.-++.+|.
T Consensus 66 -~~~~~r~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 116 (209)
T 4ds3_A 66 -KDFASKEAHEDAILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRILNIHP 116 (209)
T ss_dssp -GGSSSHHHHHHHHHHHHHHHCCSEEEESSCCSCCCHHHHGGGTTCEEEEES
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeccccCcCHHHHhhccCCeEEECC
Confidence 1111111 1145566667789999998765 2333333333335777885
No 81
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=73.77 E-value=6.2 Score=36.24 Aligned_cols=35 Identities=23% Similarity=0.109 Sum_probs=24.0
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
++|||+|+... .+.....++|.+.||+|..+.+..
T Consensus 2 ~~mrIvf~Gt~-----------~fa~~~L~~L~~~~~~i~~Vvt~p 36 (314)
T 1fmt_A 2 ESLRIIFAGTP-----------DFAARHLDALLSSGHNVVGVFTQP 36 (314)
T ss_dssp CCCEEEEEECS-----------HHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCEEEEEecC-----------HHHHHHHHHHHHCCCcEEEEEeCC
Confidence 57999999751 134445567777799988666653
No 82
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=73.43 E-value=24 Score=26.80 Aligned_cols=77 Identities=10% Similarity=0.053 Sum_probs=49.3
Q ss_pred HHHHHHHHHH---------cCEEEeCCCCCCCCChHHHHHHH-----cCCcEEecCCCCCcc---ceeeeCcceEEECC-
Q 039338 372 PAELRAFYNA---------IDIFVNPTLRPQGLDLTLMEAMM-----SGKPVMASRFPSIKG---TIVVDDEFGFMFAP- 433 (493)
Q Consensus 372 ~~~~~~~~~~---------adv~v~ps~~~eg~~~~~~EAm~-----~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~- 433 (493)
.++..+.+.. .|++++-..-++.-|..+++.+. .++|+|........+ +....|..+++..|
T Consensus 37 ~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~ 116 (140)
T 1k68_A 37 GMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSA 116 (140)
T ss_dssp HHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCC
Confidence 3566666653 68887744323444667777765 356776543222221 23445778999999
Q ss_pred CHHHHHHHHHHHHHc
Q 039338 434 NVESLHKTLEAAVSE 448 (493)
Q Consensus 434 d~~~l~~~i~~ll~~ 448 (493)
+.+++..+|.+++..
T Consensus 117 ~~~~l~~~i~~~~~~ 131 (140)
T 1k68_A 117 NLSQLFQIVKGIEEF 131 (140)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999988764
No 83
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=73.12 E-value=27 Score=26.95 Aligned_cols=76 Identities=13% Similarity=0.144 Sum_probs=49.1
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
++....+.. .|++++-..-++.-|..+++.+.. ++|||........+ +.+..|..+++..+ +.++|..+
T Consensus 42 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~ 121 (147)
T 2zay_A 42 IEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSAR 121 (147)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHH
Confidence 454454443 688776432234456778888764 56776543222221 23456788999999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|..++..
T Consensus 122 i~~~~~~ 128 (147)
T 2zay_A 122 IKRVLKL 128 (147)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998875
No 84
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=72.82 E-value=6.1 Score=32.11 Aligned_cols=39 Identities=13% Similarity=0.178 Sum_probs=30.9
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||+++-. +..|..+..+..+++.|.+.|++|.++....
T Consensus 1 Mkv~IvY~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 39 (161)
T 3hly_A 1 MSVLIGYL-----SDYGYSDRLSQAIGRGLVKTGVAVEMVDLRA 39 (161)
T ss_dssp -CEEEEEC-----TTSTTHHHHHHHHHHHHHHTTCCEEEEETTT
T ss_pred CEEEEEEE-----CCChHHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 78888864 3568888999999999999999998886543
No 85
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=72.18 E-value=14 Score=31.55 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=25.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|||+++. ..|+.+ ..+++.|.++|++|+++......
T Consensus 5 ~~ilItG-------atG~iG---~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIG-------ASGFVG---SALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEET-------CCHHHH---HHHHHHHHTTTCEEEEECSCGGG
T ss_pred CEEEEEc-------CCchHH---HHHHHHHHHCCCEEEEEEcCccc
Confidence 5666553 234444 55889999999999998876444
No 86
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=71.65 E-value=32 Score=26.36 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=45.6
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc--------CCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS--------GKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~--------G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. ..|+|..............+..+++..| +.++|.++
T Consensus 44 ~~al~~l~~~~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~g~~~~l~KP~~~~~L~~~ 123 (140)
T 3c97_A 44 LQALQAYQNRQFDVIIMDIQMPVMDGLEAVSEIRNYERTHNTKRASIIAITADTIDDDRPGAELDEYVSKPLNPNQLRDV 123 (140)
T ss_dssp HHHHHHHHHSCCSEEEECTTCCSSCHHHHHHHHHHHHHHHTCCCCCCEEEESSCCSCCCCCSSCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHhhhhhcCCCceEEEEEeCccchhHHHhCChhheEeCCCCHHHHHHH
Confidence 455555443 588877432223346667777652 4566554322222133344557899999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|.+++..
T Consensus 124 i~~~~~~ 130 (140)
T 3c97_A 124 VLTCHSE 130 (140)
T ss_dssp HHHHHC-
T ss_pred HHHHhCC
Confidence 9988754
No 87
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=71.42 E-value=5.5 Score=36.55 Aligned_cols=105 Identities=20% Similarity=0.105 Sum_probs=50.9
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccc-cCCC--CCCCCCCceEeecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQ-ENDD--GSNNKYPLLHFHEGEA 158 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~ 158 (493)
++|||+|+... .+.....++|.+.||+|..+.+.++.......... ..+. -...+.+ +.. +
T Consensus 1 ~~mrivf~Gtp-----------~fa~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIp---v~~--~ 64 (314)
T 3tqq_A 1 MSLKIVFAGTP-----------QFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIP---IIQ--P 64 (314)
T ss_dssp CCCEEEEEECS-----------GGGHHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCC---EEC--C
T ss_pred CCcEEEEECCC-----------HHHHHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCC---EEC--c
Confidence 36999999861 12344567777889998877765443111100000 0000 0001111 111 1
Q ss_pred CccccccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 159 DKWRYSKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
...+ -..+.+.+++.+||++++.++. ++..+....+.-++.+|.
T Consensus 65 ~~~~----~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHp 110 (314)
T 3tqq_A 65 FSLR----DEVEQEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHA 110 (314)
T ss_dssp SCSS----SHHHHHHHHTTCCSEEEEESCCSCCCHHHHTSSTTCEEEEES
T ss_pred ccCC----CHHHHHHHHhcCCCEEEEcCcccccCHHHHhhCcCCEEEecC
Confidence 1111 1345666778899999887652 333333322324777885
No 88
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=70.04 E-value=5.1 Score=34.53 Aligned_cols=104 Identities=15% Similarity=0.178 Sum_probs=52.5
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCC--EEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH--RVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW 161 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (493)
|||+++.. |.+..+..+.+++.+.++ +|..+.+.... ....+.- ...+.+...+.. ..+
T Consensus 2 ~rI~vl~S---------G~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~--~~~~~~A-----~~~gIp~~~~~~---~~~ 62 (216)
T 2ywr_A 2 LKIGVLVS---------GRGSNLQAIIDAIESGKVNASIELVISDNPK--AYAIERC-----KKHNVECKVIQR---KEF 62 (216)
T ss_dssp EEEEEEEC---------SCCHHHHHHHHHHHTTSSCEEEEEEEESCTT--CHHHHHH-----HHHTCCEEECCG---GGS
T ss_pred CEEEEEEe---------CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCC--hHHHHHH-----HHcCCCEEEeCc---ccc
Confidence 68998864 112457788899988887 76655554333 1111000 011222221111 111
Q ss_pred ccccc-hHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 162 RYSKG-WEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 162 ~~~~~-~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
..... -..+.+.+++.+||+|++.++. ++.-+....+.-++.+|.
T Consensus 63 ~~r~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 63 PSKKEFEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp SSHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred cchhhhhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 11111 1345566678899999987652 333333333335777885
No 89
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=70.03 E-value=5.8 Score=34.09 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=53.4
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD 159 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (493)
+++||+++.. |.+..+..+.+++.+. +++|..+.+.... ....+.- ...+.+...... .
T Consensus 7 ~~~ri~vl~S---------G~gsnl~all~~~~~~~~~~~I~~Vis~~~~--a~~l~~A-----~~~gIp~~~~~~---~ 67 (215)
T 3kcq_A 7 KELRVGVLIS---------GRGSNLEALAKAFSTEESSVVISCVISNNAE--ARGLLIA-----QSYGIPTFVVKR---K 67 (215)
T ss_dssp CCEEEEEEES---------SCCHHHHHHHHHTCCC-CSEEEEEEEESCTT--CTHHHHH-----HHTTCCEEECCB---T
T ss_pred CCCEEEEEEE---------CCcHHHHHHHHHHHcCCCCcEEEEEEeCCcc--hHHHHHH-----HHcCCCEEEeCc---c
Confidence 4678998874 2233577788887654 3687777665433 1111110 011222222211 1
Q ss_pred ccccccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 160 KWRYSKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
.+. -..+.+.+++.+||+|++.++. ++..+....+.-++.+|.
T Consensus 68 ~~~----~~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHp 112 (215)
T 3kcq_A 68 PLD----IEHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHP 112 (215)
T ss_dssp TBC----HHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred cCC----hHHHHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEEECc
Confidence 111 1566667778899999987652 333333333335777775
No 90
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=69.99 E-value=34 Score=26.11 Aligned_cols=76 Identities=12% Similarity=0.067 Sum_probs=48.5
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCcc----ceeeeCcceEEECC-CHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIKG----TIVVDDEFGFMFAP-NVESLHK 440 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~~----e~v~~~~~G~~~~~-d~~~l~~ 440 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. .+|+|........+ +....+..+++..| +.++|..
T Consensus 40 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~ 119 (140)
T 3grc_A 40 AQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLIL 119 (140)
T ss_dssp HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHH
Confidence 444444433 477776443234556778887765 67887654322111 22344677899999 9999999
Q ss_pred HHHHHHHc
Q 039338 441 TLEAAVSE 448 (493)
Q Consensus 441 ~i~~ll~~ 448 (493)
+|.+++..
T Consensus 120 ~i~~~l~~ 127 (140)
T 3grc_A 120 SLHRAIDN 127 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999876
No 91
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=69.91 E-value=7.5 Score=33.38 Aligned_cols=106 Identities=8% Similarity=0.075 Sum_probs=54.8
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHh-CCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALAR-RGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK 160 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (493)
++|||+++.. |.+..+..+.++..+ .+++|..+.+.... ....+.- ...+.+...+.. ..
T Consensus 4 ~~~riavl~S---------G~Gsnl~all~~~~~~~~~eI~~Vis~~~~--a~~~~~A-----~~~gIp~~~~~~---~~ 64 (215)
T 3tqr_A 4 EPLPIVVLIS---------GNGTNLQAIIGAIQKGLAIEIRAVISNRAD--AYGLKRA-----QQADIPTHIIPH---EE 64 (215)
T ss_dssp CCEEEEEEES---------SCCHHHHHHHHHHHTTCSEEEEEEEESCTT--CHHHHHH-----HHTTCCEEECCG---GG
T ss_pred CCcEEEEEEe---------CCcHHHHHHHHHHHcCCCCEEEEEEeCCcc--hHHHHHH-----HHcCCCEEEeCc---cc
Confidence 4789998874 223346777777765 36788877765443 1111110 012222222211 11
Q ss_pred ccc-ccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 161 WRY-SKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 161 ~~~-~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
+.. ...-..+.+.+++.+||+|++.++. ++..+....+.-++.+|.
T Consensus 65 ~~~r~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 113 (215)
T 3tqr_A 65 FPSRTDFESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHP 113 (215)
T ss_dssp SSSHHHHHHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred cCchhHhHHHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCc
Confidence 110 1112456677778999999987652 333332333335677775
No 92
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=69.82 E-value=20 Score=32.66 Aligned_cols=41 Identities=17% Similarity=0.241 Sum_probs=26.9
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.++|++|+.+ |- =.+..+-.+...++++|++|++++.....
T Consensus 4 ~~~vL~v~AH-PD-----De~l~~ggtla~~~~~G~~V~vv~lT~Ge 44 (303)
T 1q74_A 4 TPRLLFVHAH-PD-----DESLSNGATIAHYTSRGAQVHVVTCTLGE 44 (303)
T ss_dssp CCEEEEEESS-TT-----HHHHHHHHHHHHHHHTTCEEEEEESCCCT
T ss_pred CCeEEEEEeC-Cc-----hHHHhHHHHHHHHHHCCCcEEEEEEcCCC
Confidence 5789999874 32 22223334445556679999999877654
No 93
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=69.72 E-value=35 Score=26.07 Aligned_cols=76 Identities=9% Similarity=0.072 Sum_probs=46.8
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEec-CCCC--CccceeeeCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMAS-RFPS--IKGTIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s-~~~~--~~~e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. .+|||.. .... ...+....|..+++..| +.++|.++
T Consensus 41 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 120 (142)
T 3cg4_A 41 GQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEK 120 (142)
T ss_dssp HHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHH
Confidence 455555544 467666332234456677777764 4577654 2211 11134455677899999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|..++..
T Consensus 121 i~~~~~~ 127 (142)
T 3cg4_A 121 TTFFMGF 127 (142)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988764
No 94
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=69.65 E-value=5.6 Score=34.52 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=26.8
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
..+.|||++.. ..||.++. +++.|.++||+|.+++....
T Consensus 18 ~l~~~~ilVtG-------atG~iG~~---l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 18 YFQGMRVLVVG-------ANGKVARY---LLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp ---CCEEEEET-------TTSHHHHH---HHHHHHHTTCEEEEEESSGG
T ss_pred CcCCCeEEEEC-------CCChHHHH---HHHHHHhCCCeEEEEECChH
Confidence 34567877664 44666654 88899999999999986543
No 95
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=69.30 E-value=8.4 Score=30.55 Aligned_cols=39 Identities=23% Similarity=0.345 Sum_probs=30.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||+++-.+ ..|..+..+..+++.|.+.|++|.++....
T Consensus 2 ~ki~I~y~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGS-----STGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEEC-----SSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEEC-----CCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 577777642 557778888889999999999999987554
No 96
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=68.66 E-value=26 Score=27.32 Aligned_cols=67 Identities=9% Similarity=0.069 Sum_probs=44.5
Q ss_pred HcCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHH
Q 039338 381 AIDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVS 447 (493)
Q Consensus 381 ~adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~ 447 (493)
..|++++-..-++.-|..+++.+.. ++|+|..-.....+ +....|..+++..| +.++|.++|.++..
T Consensus 59 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 134 (152)
T 3heb_A 59 RAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLGL 134 (152)
T ss_dssp CBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 3578777443334557778887765 56776643222221 23456778999999 99999999998854
No 97
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=68.04 E-value=39 Score=26.21 Aligned_cols=67 Identities=16% Similarity=0.165 Sum_probs=43.0
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+.. .+|+|........ .+.+..|..+++..+ +.++|.++|.+++..
T Consensus 67 ~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 67 VDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG 140 (150)
T ss_dssp CSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHcC
Confidence 466666432234446666666654 5666654322221 134456778999999 999999999999876
No 98
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=67.42 E-value=8.1 Score=33.11 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=52.6
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW 161 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (493)
|||+++.. . +| ..+..+.+++.+. +++|..+.+.... ....+.- ...+.+.... .+..+
T Consensus 1 ~ri~vl~S------g-~g--snl~ali~~~~~~~~~~~i~~Vis~~~~--~~~~~~A-----~~~gIp~~~~---~~~~~ 61 (212)
T 1jkx_A 1 MNIVVLIS------G-NG--SNLQAIIDACKTNKIKGTVRAVFSNKAD--AFGLERA-----RQAGIATHTL---IASAF 61 (212)
T ss_dssp CEEEEEES------S-CC--HHHHHHHHHHHTTSSSSEEEEEEESCTT--CHHHHHH-----HHTTCEEEEC---CGGGC
T ss_pred CEEEEEEE------C-Cc--HHHHHHHHHHHcCCCCceEEEEEeCCCc--hHHHHHH-----HHcCCcEEEe---Ccccc
Confidence 68888874 1 23 2477788887765 5888766665433 1111110 0112222221 11111
Q ss_pred ccccc-hHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 162 RYSKG-WEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 162 ~~~~~-~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
..... -..+.+.+++.+||+|++.++. ++..+....+.-++.+|.
T Consensus 62 ~~r~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 62 DSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp SSHHHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred cchhhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 11111 1345667778899999987652 333333333335777775
No 99
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=67.30 E-value=6.9 Score=31.02 Aligned_cols=38 Identities=26% Similarity=0.226 Sum_probs=29.4
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|||+++..+ ..|-.+..+..+++.+.+.|++|.++...
T Consensus 1 mki~iiy~S-----~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYGS-----TTGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEEC-----SSSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEEC-----CcCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 788888652 44667777888899999899999887654
No 100
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=67.28 E-value=6.7 Score=33.42 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=25.6
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||+++. ..|+.++ .+++.|.++||+|.+++...
T Consensus 1 MkvlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIG-------ATGRAGS---RILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEc-------CCchhHH---HHHHHHHhCCCEEEEEEcCc
Confidence 7877664 3366665 48889999999999998654
No 101
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=67.26 E-value=6.2 Score=33.86 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=52.8
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW 161 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (493)
|||+++.. |.+..+..+.+++.+. +++|..+.+.... .+..+.- ...+.+...+.. ..+
T Consensus 4 ~ki~vl~s---------G~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~--~~v~~~A-----~~~gIp~~~~~~---~~~ 64 (212)
T 3av3_A 4 KRLAVFAS---------GSGTNFQAIVDAAKRGDLPARVALLVCDRPG--AKVIERA-----ARENVPAFVFSP---KDY 64 (212)
T ss_dssp EEEEEECC---------SSCHHHHHHHHHHHTTCCCEEEEEEEESSTT--CHHHHHH-----HHTTCCEEECCG---GGS
T ss_pred cEEEEEEE---------CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCC--cHHHHHH-----HHcCCCEEEeCc---ccc
Confidence 58888864 1123577788888877 6888766665433 1111110 011222222111 111
Q ss_pred cccc-chHHHHHHhcCCCCcEEEeCcc--chhHHhhhccCcEEEEecc
Q 039338 162 RYSK-GWEQFDEENQREPFDVVHSESV--ALPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 162 ~~~~-~~~~~~~~~~~~~~DiI~~~~~--~~~~~~~~~~p~~v~~~h~ 206 (493)
.... .-..+.+.+++.+||+|++.++ -++.-+....+.-++.+|.
T Consensus 65 ~~~~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 65 PSKAAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp SSHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred cchhhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 1111 1134556667889999998765 2333333333335777785
No 102
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=66.47 E-value=15 Score=29.07 Aligned_cols=41 Identities=24% Similarity=0.144 Sum_probs=29.4
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
..||++++.. .|.. --..-.+..++..|.++||+|+|-...
T Consensus 5 ~~m~~LilLG-CPE~---Pvq~p~~lYl~~~Lk~~G~~v~VA~np 45 (157)
T 1kjn_A 5 STGKALMVLG-CPES---PVQIPLAIYTSHKLKKKGFRVTVTANP 45 (157)
T ss_dssp -CCEEEEECC-CSCS---TTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred cceeeeEEec-CCCC---cchhhHHHHHHHHHHhcCCeeEEecCH
Confidence 4699888876 4432 223445677899999999999998754
No 103
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=65.40 E-value=35 Score=26.16 Aligned_cols=77 Identities=12% Similarity=-0.003 Sum_probs=50.3
Q ss_pred HHHHHHHHHH-------cCEEEeCCCCCCCCChHHHHHHHc-------CCcEEecCCCCCcc---ceeeeC-cceEEECC
Q 039338 372 PAELRAFYNA-------IDIFVNPTLRPQGLDLTLMEAMMS-------GKPVMASRFPSIKG---TIVVDD-EFGFMFAP 433 (493)
Q Consensus 372 ~~~~~~~~~~-------adv~v~ps~~~eg~~~~~~EAm~~-------G~PvI~s~~~~~~~---e~v~~~-~~G~~~~~ 433 (493)
.++..+.+.. .|++++-..-++.-|..+++.+.. ..|+|..-.....+ +....+ ..+++..|
T Consensus 44 ~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~KP 123 (146)
T 3ilh_A 44 GNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKP 123 (146)
T ss_dssp HHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSS
T ss_pred HHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeCC
Confidence 3566666655 688877443335556777777665 56776543322221 223445 67899999
Q ss_pred -CHHHHHHHHHHHHHc
Q 039338 434 -NVESLHKTLEAAVSE 448 (493)
Q Consensus 434 -d~~~l~~~i~~ll~~ 448 (493)
+.++|.++|.+....
T Consensus 124 ~~~~~L~~~i~~~~~~ 139 (146)
T 3ilh_A 124 LTANALNNLYNKVLNE 139 (146)
T ss_dssp CCHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHh
Confidence 999999999998875
No 104
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=65.33 E-value=7.4 Score=33.27 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=25.3
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||++.. ..|+.++ .+++.|.++|++|.++....
T Consensus 1 MkilVtG-------atG~iG~---~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVLG-------ATGRAGS---AIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEEc-------CCCHHHH---HHHHHHHHCCCEEEEEEecc
Confidence 7877664 3366664 58889999999999997654
No 105
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=64.78 E-value=23 Score=29.00 Aligned_cols=46 Identities=20% Similarity=0.227 Sum_probs=31.1
Q ss_pred CCCceEEEEEeccCCCCCCCCch-HHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGM-ERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
+.++||+++++.. .+.|-. ......|+..|.+.|++|.....-.++
T Consensus 7 ~~~~~~v~Ii~tG----dE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd 53 (172)
T 1mkz_A 7 EFIPTRIAILTVS----NRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKEN 53 (172)
T ss_dssp SCCCCEEEEEEEC----SSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSC
T ss_pred CCCCCEEEEEEEe----CCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCC
Confidence 4567999999873 244433 334566889999999998776544433
No 106
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=64.78 E-value=43 Score=26.18 Aligned_cols=76 Identities=17% Similarity=0.136 Sum_probs=48.4
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH-----cCCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM-----SGKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~-----~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
++..+.+.. .|++++-..-++.-|..+++.+. ..+|+|........+ +.+..|..+++..| +.++|..+
T Consensus 41 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 120 (154)
T 3gt7_A 41 REAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLASH 120 (154)
T ss_dssp HHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCCHHHHHHH
Confidence 444444433 47777643223445677777775 356777643222221 23456778999999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|.+++..
T Consensus 121 i~~~l~~ 127 (154)
T 3gt7_A 121 VKRLLSG 127 (154)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
No 107
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=64.54 E-value=9.7 Score=28.56 Aligned_cols=40 Identities=18% Similarity=0.152 Sum_probs=27.9
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.++|||++++. .....+..+..+-++..++|.+|.+....
T Consensus 4 ~~~mkIlL~C~------aGmSTsllv~km~~~a~~~gi~v~i~a~~ 43 (108)
T 3nbm_A 4 SKELKVLVLCA------GSGTSAQLANAINEGANLTEVRVIANSGA 43 (108)
T ss_dssp -CCEEEEEEES------SSSHHHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred ccCceEEEECC------CCCCHHHHHHHHHHHHHHCCCceEEEEcc
Confidence 46899999996 22344445556667777789999997743
No 108
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=64.30 E-value=42 Score=24.95 Aligned_cols=66 Identities=12% Similarity=0.119 Sum_probs=43.1
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHH
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVS 447 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~ 447 (493)
.|++++-..-++.-|..+++.+.. ++|+|.....+..+ +....|..+++..| +.+++..++.+++.
T Consensus 47 ~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 47 PDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp CSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred CCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCCCHHHHHHHHHHHhc
Confidence 477776433234456778887743 56876543222221 23455778999999 99999999998764
No 109
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=64.26 E-value=48 Score=25.67 Aligned_cols=66 Identities=11% Similarity=0.076 Sum_probs=42.4
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHH
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVS 447 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~ 447 (493)
.|++++-..-++.-|..+++.+.. ++|||........+ +....|..+++..| +.++|..+|..++.
T Consensus 62 ~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~ 136 (149)
T 1i3c_A 62 PNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIES 136 (149)
T ss_dssp CSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHH
Confidence 588877432233346677777753 46776543222111 23455778999999 99999999988754
No 110
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=63.85 E-value=9.4 Score=31.97 Aligned_cols=37 Identities=22% Similarity=0.286 Sum_probs=26.4
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.|||+++. ..|+.++ .+++.|.++|++|.+++.....
T Consensus 3 ~~~ilVtG-------atG~iG~---~l~~~l~~~g~~V~~~~r~~~~ 39 (206)
T 1hdo_A 3 VKKIAIFG-------ATGQTGL---TTLAQAVQAGYEVTVLVRDSSR 39 (206)
T ss_dssp CCEEEEES-------TTSHHHH---HHHHHHHHTTCEEEEEESCGGG
T ss_pred CCEEEEEc-------CCcHHHH---HHHHHHHHCCCeEEEEEeChhh
Confidence 37777664 3366554 5889999999999998865433
No 111
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=63.74 E-value=29 Score=27.35 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=41.8
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHH
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVS 447 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~ 447 (493)
.|++++-..-++.-|..+++.+.. .+|||........+ +....|..+++..+ +.++|.++|.+++.
T Consensus 84 ~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 84 IDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp CCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTTC
T ss_pred CCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHhc
Confidence 477777443234446666666543 56776653222221 23456778899999 99999999988753
No 112
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=63.18 E-value=9.1 Score=33.62 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=26.5
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
||+++|+. ..||.+.. +++.|.++|++|.++....
T Consensus 1 mk~vlVTG------as~gIG~~---~a~~l~~~G~~V~~~~r~~ 35 (257)
T 1fjh_A 1 MSIIVISG------CATGIGAA---TRKVLEAAGHQIVGIDIRD 35 (257)
T ss_dssp CCEEEEET------TTSHHHHH---HHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEeC------CCCHHHHH---HHHHHHHCCCEEEEEeCCc
Confidence 67777875 45776654 8899999999998886543
No 113
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=62.97 E-value=51 Score=25.54 Aligned_cols=67 Identities=12% Similarity=0.057 Sum_probs=43.8
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+.. .+|||......-.+ +.+..|..+++..+ +.+++.++|.+++..
T Consensus 62 ~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 62 PDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp CSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHcC
Confidence 577776432234456677776654 46676543222211 23456788999999 999999999999886
No 114
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=62.96 E-value=21 Score=28.94 Aligned_cols=69 Identities=20% Similarity=0.095 Sum_probs=40.6
Q ss_pred HHHHHcCEEEeCCCCCCCCChHHHH---HHHcCCcEEecCC-----CCCcc-------ceeee-------------Ccce
Q 039338 377 AFYNAIDIFVNPTLRPQGLDLTLME---AMMSGKPVMASRF-----PSIKG-------TIVVD-------------DEFG 428 (493)
Q Consensus 377 ~~~~~adv~v~ps~~~eg~~~~~~E---Am~~G~PvI~s~~-----~~~~~-------e~v~~-------------~~~G 428 (493)
+.+..||++|.--...+.-+.|.+| |.+.|+||++-.. |+... |+.++ ..+|
T Consensus 65 ~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~~N~~~~G~i~~~g 144 (162)
T 3ehd_A 65 ENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLIKLNG 144 (162)
T ss_dssp HHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCCCCHHHHHHHHTTE
T ss_pred HHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhhhhHHHhhhHHhCC
Confidence 4689999987632111222346666 6899999998632 11110 01111 1278
Q ss_pred EEECCCHHHHHHHHHHHH
Q 039338 429 FMFAPNVESLHKTLEAAV 446 (493)
Q Consensus 429 ~~~~~d~~~l~~~i~~ll 446 (493)
.++. +.+++.++|.+.+
T Consensus 145 ~~~~-~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 145 RVVS-SEEDLLEEIKQRL 161 (162)
T ss_dssp EEES-SHHHHHHHHHHTC
T ss_pred eEEe-CHHHHHHHHHHHh
Confidence 8886 8888888887653
No 115
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=62.91 E-value=16 Score=27.15 Aligned_cols=42 Identities=14% Similarity=0.001 Sum_probs=31.2
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
+.+||++++. ..-|.+..+..+-+.+.++|.++.+.......
T Consensus 2 ~mkkIll~Cg------~G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~ 43 (106)
T 1e2b_A 2 EKKHIYLFSS------AGMSTSLLVSKMRAQAEKYEVPVIIEAFPETL 43 (106)
T ss_dssp CCEEEEEECS------SSTTTHHHHHHHHHHHHHSCCSEEEEEECSSS
T ss_pred CCcEEEEECC------CchhHHHHHHHHHHHHHHCCCCeEEEEecHHH
Confidence 3468999997 23355567778889999999998887765544
No 116
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=62.71 E-value=44 Score=25.07 Aligned_cols=67 Identities=16% Similarity=0.234 Sum_probs=45.3
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+.. .+|||........+ +....|..+++..| +++++.+++..++..
T Consensus 52 ~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 52 TKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp CCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHhcc
Confidence 578776432234557788888764 46777643222221 23456788999999 999999999988764
No 117
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=62.50 E-value=5.7 Score=34.13 Aligned_cols=107 Identities=11% Similarity=0.025 Sum_probs=52.8
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHh-CCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALAR-RGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA 158 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (493)
+.++|||+++.. |.+..+..+.+++.+ .+++|..+.+.... +..+.- ...+.+.... ..
T Consensus 9 ~~~~~ri~vl~S---------G~gsnl~all~~~~~~~~~eI~~Vis~~~a---~~~~~A-----~~~gIp~~~~-~~-- 68 (215)
T 3da8_A 9 PSAPARLVVLAS---------GTGSLLRSLLDAAVGDYPARVVAVGVDREC---RAAEIA-----AEASVPVFTV-RL-- 68 (215)
T ss_dssp CCSSEEEEEEES---------SCCHHHHHHHHHSSTTCSEEEEEEEESSCC---HHHHHH-----HHTTCCEEEC-CG--
T ss_pred CCCCcEEEEEEe---------CChHHHHHHHHHHhccCCCeEEEEEeCCch---HHHHHH-----HHcCCCEEEe-Cc--
Confidence 456789999874 123346667776643 24587766655432 111110 0122222222 11
Q ss_pred Cccc-cccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 159 DKWR-YSKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 159 ~~~~-~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
..+. ....-..+.+.+++.+||+|++.++. ++..+....+.-++.+|.
T Consensus 69 ~~~~~r~~~d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHp 119 (215)
T 3da8_A 69 ADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHP 119 (215)
T ss_dssp GGSSSHHHHHHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEES
T ss_pred ccccchhhhhHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCc
Confidence 1110 11112456677778999999887652 333222222324677775
No 118
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=62.16 E-value=35 Score=26.00 Aligned_cols=76 Identities=14% Similarity=0.169 Sum_probs=46.7
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc--CCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS--GKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKTLEA 444 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~--G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~i~~ 444 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. .+|+|........ .+.+..|..+++..| +.+++..++..
T Consensus 38 ~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~ 117 (136)
T 2qzj_A 38 EEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKA 117 (136)
T ss_dssp HHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHH
Confidence 455555543 477776332223345667777653 5677654322211 123456778999999 99999999998
Q ss_pred HHHc
Q 039338 445 AVSE 448 (493)
Q Consensus 445 ll~~ 448 (493)
++..
T Consensus 118 ~~~~ 121 (136)
T 2qzj_A 118 ILRR 121 (136)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 119
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=61.61 E-value=43 Score=24.89 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=45.6
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++..+.+.. .|++++-..-+..-|..+++.+. .+.|+|........ .+....|..+++..| +.+++.+++.
T Consensus 37 ~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~ 116 (126)
T 1dbw_A 37 EAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIE 116 (126)
T ss_dssp HHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHH
Confidence 444444433 46766532222334566666664 35677664322211 123456778999999 9999999999
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
+++..
T Consensus 117 ~~~~~ 121 (126)
T 1dbw_A 117 RASEH 121 (126)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 88765
No 120
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=61.51 E-value=29 Score=26.10 Aligned_cols=33 Identities=9% Similarity=0.085 Sum_probs=24.4
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEE
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHI 122 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v 122 (493)
+++++||+++... ......+.+.|.+.|++|..
T Consensus 4 ~~~~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~ 36 (130)
T 3eod_A 4 PLVGKQILIVEDE----------QVFRSLLDSWFSSLGATTVL 36 (130)
T ss_dssp TTTTCEEEEECSC----------HHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCeEEEEeCC----------HHHHHHHHHHHHhCCceEEE
Confidence 4557899999863 33456677888889998875
No 121
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=61.49 E-value=7 Score=36.28 Aligned_cols=38 Identities=11% Similarity=0.066 Sum_probs=25.6
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
+|.+|||+++. ..|+.+. .+++.|.+.||+|.+++...
T Consensus 7 ~M~~~~IlVtG-------atG~iG~---~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 7 PSPKGRVLIAG-------ATGFIGQ---FVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ----CCEEEEC-------TTSHHHH---HHHHHHHHTTCCEEEEECSS
T ss_pred CCCCCeEEEEC-------CCcHHHH---HHHHHHHHCCCCEEEEECCC
Confidence 34567888775 3355554 47888999999999998765
No 122
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=61.35 E-value=51 Score=25.02 Aligned_cols=76 Identities=12% Similarity=0.066 Sum_probs=48.3
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. .+|+|.....+..+ +....|..+++..| +.++|..+
T Consensus 38 ~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 117 (136)
T 3t6k_A 38 EEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYLAKPFEPQELVYR 117 (136)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEEETTCCHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEEeCCCCHHHHHHH
Confidence 444444433 477776432234456777777753 56777543222221 23456788999999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
+.+++..
T Consensus 118 i~~~l~~ 124 (136)
T 3t6k_A 118 VKNILAR 124 (136)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9999875
No 123
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=61.14 E-value=51 Score=24.90 Aligned_cols=76 Identities=17% Similarity=0.100 Sum_probs=48.8
Q ss_pred HHHHHHHH--HcCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYN--AIDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~--~adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++..+.+. ..|++++-..-++.-|..+++.+.. ..|+|........ .+....|..+++..| +.++|.++|.
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~ 120 (137)
T 3hdg_A 41 EEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKPIEPGRLMETLE 120 (137)
T ss_dssp HHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSSCCHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeEcCCCCHHHHHHHHH
Confidence 44444443 3578777443234456677776654 5677765332221 123456778899999 9999999999
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
+++..
T Consensus 121 ~~~~~ 125 (137)
T 3hdg_A 121 DFRHI 125 (137)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 124
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=61.06 E-value=16 Score=31.04 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=30.8
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|||++|..+ ..|-....+..+++.+.+.|++|.++....
T Consensus 6 mmkilii~~S-----~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 45 (211)
T 1ydg_A 6 PVKLAIVFYS-----STGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp CCEEEEEECC-----SSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCeEEEEEEC-----CCChHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 4799999863 345566777788899998999999987544
No 125
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=60.84 E-value=11 Score=32.98 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=24.9
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
||.++|+. ..||.+.. +++.|.++|++|.++....
T Consensus 1 Mk~vlVtG------asg~iG~~---l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 1 MSVIAITG------SASGIGAA---LKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp -CEEEEET------TTSHHHHH---HHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEeC------CCcHHHHH---HHHHHHhCCCEEEEEeCCh
Confidence 66666664 44676654 7889999999999887643
No 126
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=60.70 E-value=12 Score=28.96 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=23.9
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|||+++.. |.. -..+++.|.+.|++|.++...
T Consensus 4 ~m~i~IiG~--------G~i---G~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI--------GRV---GYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC--------SHH---HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC--------CHH---HHHHHHHHHhCCCeEEEEECC
Confidence 589988842 443 345788899999999998654
No 127
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=60.67 E-value=9.1 Score=33.62 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=30.0
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
||||+.... |=..--+..|+++|.+.| +|+|+.+..+.
T Consensus 2 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~~ 39 (251)
T 2phj_A 2 PTFLLVNDD-------GYFSPGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CEEEEECCC-------CCCCHHHHHHHHHHHhcC-CEEEEecCCCc
Confidence 899988763 223345888999999998 99999988766
No 128
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=60.39 E-value=50 Score=24.63 Aligned_cols=78 Identities=12% Similarity=-0.012 Sum_probs=44.6
Q ss_pred CHHHHHHHHHH---cCEEEeCCCCCC-CCChHHHHHHHc---CCcEEecCCCCCccceeee-CcceEEECC-CHHHHHHH
Q 039338 371 SPAELRAFYNA---IDIFVNPTLRPQ-GLDLTLMEAMMS---GKPVMASRFPSIKGTIVVD-DEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 371 ~~~~~~~~~~~---adv~v~ps~~~e-g~~~~~~EAm~~---G~PvI~s~~~~~~~e~v~~-~~~G~~~~~-d~~~l~~~ 441 (493)
+.++....+.. .|++++-..-++ .-|..+++.+.. ++|+|........+..... ...+++..| +.+++..+
T Consensus 37 ~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~l~kP~~~~~l~~~ 116 (132)
T 2rdm_A 37 SGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHAALEWASNGVPDSIILEKPFTSAQLITA 116 (132)
T ss_dssp SHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSCCTTHHHHSCTTCEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCccHHHHHhhcCCcceEeCCCCHHHHHHH
Confidence 33555555543 477776432223 345666666643 5777654222212111111 112688888 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|.+++..
T Consensus 117 i~~~~~~ 123 (132)
T 2rdm_A 117 VSQLLNA 123 (132)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999876
No 129
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=60.37 E-value=17 Score=28.43 Aligned_cols=45 Identities=9% Similarity=-0.090 Sum_probs=32.1
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
..+|++|+...=| ...........++......||+|.++.....-
T Consensus 14 ~~~kl~ii~~sgP---~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV 58 (134)
T 3mc3_A 14 QXXXILIVVTHGP---EDLDRTYAPLFMASISASMEYETSVFFMIXGP 58 (134)
T ss_dssp CCCEEEEEECCCG---GGTHHHHHHHHHHHHHHHTTCEEEEEECTTGG
T ss_pred ccceEEEEEccCC---CCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcH
Confidence 3568888887522 23445556778888888999999998876544
No 130
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=60.32 E-value=12 Score=28.03 Aligned_cols=40 Identities=5% Similarity=-0.012 Sum_probs=28.3
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|||++++.. .. |.+..+..+-+.+.+.|.++.+-+....
T Consensus 4 ~mkIlvvC~~-----G~-~TSll~~kl~~~~~~~gi~~~i~~~~~~ 43 (109)
T 2l2q_A 4 SMNILLVCGA-----GM-STSMLVQRIEKYAKSKNINATIEAIAET 43 (109)
T ss_dssp CEEEEEESSS-----SC-SSCHHHHHHHHHHHHHTCSEEEEEECST
T ss_pred ceEEEEECCC-----hH-hHHHHHHHHHHHHHHCCCCeEEEEecHH
Confidence 5999999873 33 3336677888889999998776554433
No 131
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=60.20 E-value=50 Score=25.65 Aligned_cols=77 Identities=12% Similarity=0.118 Sum_probs=46.3
Q ss_pred HHHHHHHHHH---cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHH
Q 039338 372 PAELRAFYNA---IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 372 ~~~~~~~~~~---adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
.++....+.. .|++++-..-++.-|..+++.+.. ++|+|........ .+.+..|..+++..| +.++|.++
T Consensus 38 ~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~ 117 (154)
T 2qsj_A 38 VSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHA 117 (154)
T ss_dssp HHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHHHH
Confidence 3566666655 588776432223345666766653 6788765322211 123445778888889 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|..++..
T Consensus 118 l~~~~~~ 124 (154)
T 2qsj_A 118 VSLILEG 124 (154)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9999876
No 132
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=59.64 E-value=16 Score=31.71 Aligned_cols=43 Identities=16% Similarity=0.147 Sum_probs=31.1
Q ss_pred ceEEEEEeccCCCCCCCCch-HHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGM-ERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.|||++|..+ | ..++. ...+..+++.+.+.|++|.++......
T Consensus 1 ~mkiLiI~gs-p---r~~S~t~~l~~~~~~~l~~~g~ev~~~dL~~~~ 44 (228)
T 3tem_A 1 GKKVLIVYAH-Q---EPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMN 44 (228)
T ss_dssp CCEEEEEECC-S---CTTSHHHHHHHHHHHHHHHHTCEEEEEETTTTT
T ss_pred CCEEEEEEeC-C---CCCCHHHHHHHHHHHHHHHCCCEEEEEEhhhcC
Confidence 3899999985 2 44554 444556778888889999999876544
No 133
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=59.61 E-value=46 Score=25.96 Aligned_cols=67 Identities=15% Similarity=0.213 Sum_probs=41.9
Q ss_pred cCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+. .++|||........ .+.+..|..+++..| +.+++..+|..++..
T Consensus 48 ~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 48 AGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEK 121 (155)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHHH
Confidence 47776633222334556666654 36777764321111 123445778999999 999999999998875
No 134
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=59.31 E-value=17 Score=31.05 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=28.1
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
++||++-.. . +-+......|++.|.+.|++|+++.+..
T Consensus 4 ~k~IllgvT------G-aiaa~k~~~ll~~L~~~g~eV~vv~T~~ 41 (209)
T 3zqu_A 4 PERITLAMT------G-ASGAQYGLRLLDCLVQEEREVHFLISKA 41 (209)
T ss_dssp CSEEEEEEC------S-SSCHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CCEEEEEEE------C-HHHHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 457776654 2 2234558899999999999999998754
No 135
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=59.24 E-value=17 Score=30.45 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=30.1
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||++|..+ ..|-....+..+++.+.+.|++|.++....
T Consensus 6 ~kilii~~S-----~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 6 PYILVLYYS-----RHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp CEEEEEECC-----SSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred ceEEEEEeC-----CCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 589999864 345566677788899998999999987644
No 136
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=59.15 E-value=8.8 Score=32.74 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=26.9
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|||++.. ..|+.++ .+++.|.++|++|.+++.....
T Consensus 1 M~ilItG-------atG~iG~---~l~~~L~~~g~~V~~~~R~~~~ 36 (219)
T 3dqp_A 1 MKIFIVG-------STGRVGK---SLLKSLSTTDYQIYAGARKVEQ 36 (219)
T ss_dssp CEEEEES-------TTSHHHH---HHHHHHTTSSCEEEEEESSGGG
T ss_pred CeEEEEC-------CCCHHHH---HHHHHHHHCCCEEEEEECCccc
Confidence 7877664 3466664 5889999999999999876544
No 137
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=59.05 E-value=14 Score=30.90 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=30.0
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|||++|.. + .|-....+..+++.+.+.|++|.++....
T Consensus 4 mmkilii~~-----S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 4 KPNILVLFY-----G-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCEEEEEEC-----C-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CcEEEEEEe-----C-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 479999975 2 45566677778888888899999987644
No 138
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=59.04 E-value=17 Score=27.34 Aligned_cols=43 Identities=16% Similarity=0.172 Sum_probs=30.9
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CC-EEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GH-RVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~-~V~v~~~~~~~ 129 (493)
||++++...=| ...........++..+.+. |+ +|.++.....-
T Consensus 2 ~k~~ii~~~~p---~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV 46 (117)
T 1jx7_A 2 QKIVIVANGAP---YGSESLFNSLRLAIALREQESNLDLRLFLMSDAV 46 (117)
T ss_dssp CEEEEEECCCT---TTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGG
T ss_pred cEEEEEEcCCC---CCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHH
Confidence 37888877533 2234455678899999999 99 99998876544
No 139
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=58.73 E-value=58 Score=24.79 Aligned_cols=77 Identities=13% Similarity=0.045 Sum_probs=48.6
Q ss_pred HHHHHHHHHH---cCEEEeCCCCCC-CCChHHHHHHH--cCCcEEecCCCCC---ccceeeeCcceEEECC-CHHHHHHH
Q 039338 372 PAELRAFYNA---IDIFVNPTLRPQ-GLDLTLMEAMM--SGKPVMASRFPSI---KGTIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 372 ~~~~~~~~~~---adv~v~ps~~~e-g~~~~~~EAm~--~G~PvI~s~~~~~---~~e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
.++....+.. .|++++-..-++ .-|..+++.+. -.+|+|....... ..+....|..+++..| +.++|..+
T Consensus 38 ~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 117 (140)
T 3h5i_A 38 GEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITI 117 (140)
T ss_dssp HHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHHH
T ss_pred hHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHHH
Confidence 3555555543 478776432222 44566666655 3678776422111 1134555778999999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|..++..
T Consensus 118 i~~~l~~ 124 (140)
T 3h5i_A 118 VEMALRL 124 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998875
No 140
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=58.64 E-value=51 Score=25.21 Aligned_cols=67 Identities=10% Similarity=0.114 Sum_probs=43.6
Q ss_pred cCEEEeCCCCCCCCChHHHHHHH-----cCCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMM-----SGKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~-----~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+. .++|+|........+ +....+..+++..| +.++|..+|.+++..
T Consensus 63 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 138 (149)
T 1k66_A 63 PAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQTFIKY 138 (149)
T ss_dssp CSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 58877743223445667777776 356776643222211 23445778999999 999999999988764
No 141
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=58.45 E-value=52 Score=24.19 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=45.8
Q ss_pred HHHHHHHH--HcCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYN--AIDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~--~adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
++....+. ..|++++-..-++.-|..+++.+.. .+|+|........ .+....|..+++..| +.+++..+
T Consensus 35 ~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (124)
T 1mb3_A 35 LSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLET 114 (124)
T ss_dssp HHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC------CHHHHHHHTCSEEECSSCCHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHH
Confidence 34444433 3588776432234446677777753 5677764322111 123446778999999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
+.+++..
T Consensus 115 i~~~~~~ 121 (124)
T 1mb3_A 115 IKRLLER 121 (124)
T ss_dssp HHHHHSC
T ss_pred HHHHHhc
Confidence 9988754
No 142
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=58.37 E-value=18 Score=30.22 Aligned_cols=41 Identities=17% Similarity=0.297 Sum_probs=31.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
|||..|+.. ...-|-...+.+|+..|+++|..|.++-.+..
T Consensus 1 M~vi~v~s~----kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 1 MKVISFLNP----KGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp CEEEEECCS----STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEEeC----CCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 777777652 24456677788999999999999999976543
No 143
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=58.28 E-value=13 Score=34.24 Aligned_cols=37 Identities=22% Similarity=0.335 Sum_probs=26.6
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
..|||++.. ..|+.+. .+++.|.++||+|++++....
T Consensus 12 ~~M~ilVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~~ 48 (342)
T 2x4g_A 12 AHVKYAVLG-------ATGLLGH---HAARAIRAAGHDLVLIHRPSS 48 (342)
T ss_dssp CCCEEEEES-------TTSHHHH---HHHHHHHHTTCEEEEEECTTS
T ss_pred cCCEEEEEC-------CCcHHHH---HHHHHHHHCCCEEEEEecChH
Confidence 357887764 3366554 478889999999999886543
No 144
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=58.28 E-value=15 Score=30.97 Aligned_cols=37 Identities=22% Similarity=0.153 Sum_probs=27.8
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~ 127 (493)
|||++-.. ...| ......+++.|.+. |++|+++.+..
T Consensus 1 ~~IllgvT------Gsia-a~k~~~ll~~L~~~~g~~V~vv~T~~ 38 (197)
T 1sbz_A 1 MKLIVGMT------GATG-APLGVALLQALREMPNVETHLVMSKW 38 (197)
T ss_dssp CEEEEEEC------SSSC-HHHHHHHHHHHHTCTTCEEEEEECHH
T ss_pred CEEEEEEe------ChHH-HHHHHHHHHHHHhccCCEEEEEECch
Confidence 67777664 2233 45689999999999 99999998654
No 145
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=58.20 E-value=8.6 Score=33.21 Aligned_cols=35 Identities=11% Similarity=0.203 Sum_probs=25.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
||+++|+. ..||.++ .+++.|.++|++|.++....
T Consensus 1 Mk~vlVTG------as~gIG~---~~a~~l~~~G~~V~~~~r~~ 35 (230)
T 3guy_A 1 MSLIVITG------ASSGLGA---ELAKLYDAEGKATYLTGRSE 35 (230)
T ss_dssp --CEEEES------TTSHHHH---HHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEec------CCchHHH---HHHHHHHHCCCEEEEEeCCH
Confidence 78788875 4577665 48899999999988886543
No 146
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=58.10 E-value=16 Score=31.68 Aligned_cols=39 Identities=10% Similarity=-0.016 Sum_probs=31.9
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFT 124 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 124 (493)
.+||.++|+.. ...-|=...+..|+++|+++|..|..+=
T Consensus 2 ~~mk~i~Itgt----~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGT----DTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEES----SSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeC----CCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 46898888873 3556777788999999999999998864
No 147
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=57.86 E-value=11 Score=33.13 Aligned_cols=38 Identities=18% Similarity=0.227 Sum_probs=29.3
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
||||+.... |=..--+..|+++|.+.| +|+|+.+..+.
T Consensus 1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (244)
T 2e6c_A 1 MRILVTNDD-------GIYSPGLWALAEAASQFG-EVFVAAPDTEQ 38 (244)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEECSSC
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 788888763 223345888999999988 99999987765
No 148
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=57.78 E-value=64 Score=25.01 Aligned_cols=67 Identities=13% Similarity=0.176 Sum_probs=42.1
Q ss_pred cCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCCCCCcc---ceeeeC-cceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRFPSIKG---TIVVDD-EFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~~~~~~---e~v~~~-~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+. ..+|||........+ +.+..+ ..+++..| +.++|..+|.+++..
T Consensus 59 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 59 VDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELLLALRQALEH 133 (153)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 47776643223444566666654 356776653322221 223445 57899999 999999999999875
No 149
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=57.43 E-value=11 Score=32.19 Aligned_cols=39 Identities=15% Similarity=-0.027 Sum_probs=27.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHH--HHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERH--AHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~--~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.+||++... ||...+ ...+.+.|.+.|++|+++.+....
T Consensus 5 ~k~IllgiT--------Gsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFT--------GSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEEC--------SCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEE--------ChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 457777654 333444 789999999999999999876544
No 150
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=57.13 E-value=18 Score=33.16 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=24.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-C-CEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR-G-HRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G-~~V~v~~~~ 126 (493)
|++|||+++.. |+ . ..+++.|.+. | ++|.++...
T Consensus 2 m~~~~Ili~g~--------g~-~---~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSA--------GR-R---AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESC--------TT-C---HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecC--------Cc-h---HHHHHHHHHhcCCCEEEEEeCC
Confidence 56799999853 22 1 3678888876 6 888887654
No 151
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=57.02 E-value=11 Score=32.99 Aligned_cols=38 Identities=16% Similarity=0.206 Sum_probs=29.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
||||+.... |=..--+..|+++|.+.| +|+|+.+..+.
T Consensus 1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (247)
T 1j9j_A 1 MRILVTNDD-------GIQSKGIIVLAELLSEEH-EVFVVAPDKER 38 (247)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 788888763 223345888999999987 99999987765
No 152
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=56.96 E-value=20 Score=31.53 Aligned_cols=44 Identities=18% Similarity=0.160 Sum_probs=31.2
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHH-HHHHHHHHHhCCCEEEEEecCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERH-AHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~-~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
++..|||++|...- ..+|.... +..+++.+.+.|++|.++....
T Consensus 31 ~~~~mkIliI~GS~----r~~s~t~~La~~~~~~l~~~g~eve~idL~~ 75 (247)
T 2q62_A 31 STHRPRILILYGSL----RTVSYSRLLAEEARRLLEFFGAEVKVFDPSG 75 (247)
T ss_dssp CCSCCEEEEEECCC----CSSCHHHHHHHHHHHHHHHTTCEEEECCCTT
T ss_pred cCCCCeEEEEEccC----CCCCHHHHHHHHHHHHHhhCCCEEEEEEhhc
Confidence 45578999999852 34555544 4557788888899999987654
No 153
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=56.91 E-value=22 Score=32.35 Aligned_cols=35 Identities=23% Similarity=0.211 Sum_probs=23.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|||+|+.. ..+.....++|.+.||+|..+.+..+.
T Consensus 1 mrivf~gt-----------~~fa~~~L~~L~~~~~~i~~Vvt~~d~ 35 (305)
T 2bln_A 1 MKTVVFAY-----------HDMGCLGIEALLAAGYEISAIFTHTDN 35 (305)
T ss_dssp CEEEEEEC-----------HHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred CEEEEEEc-----------CHHHHHHHHHHHHCCCcEEEEEcCCCC
Confidence 78888864 223445567777779999877765443
No 154
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=56.75 E-value=72 Score=26.66 Aligned_cols=99 Identities=8% Similarity=0.100 Sum_probs=52.9
Q ss_pred CcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCC---cHHHHhhhcCcEEEecCCC---HHHHHHHHHHcC
Q 039338 310 ASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP---WEQRYKDFGHQVLVMGSMS---PAELRAFYNAID 383 (493)
Q Consensus 310 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~---~~~~~~~l~~~V~~~g~~~---~~~~~~~~~~ad 383 (493)
++++++..|.....|..+. ++.|++.+-++++++--... ..+.++.+..+ .+..... .-.-.++...+|
T Consensus 9 k~IllgvTGs~aa~k~~~l----~~~L~~~g~~V~vv~T~~A~~fi~~~~~~~l~~~-v~~~~~~~~~~~~hi~l~~~aD 83 (194)
T 1p3y_1 9 KKLLIGICGSISSVGISSY----LLYFKSFFKEIRVVMTKTAEDLIPAHTVSYFCDH-VYSEHGENGKRHSHVEIGRWAD 83 (194)
T ss_dssp CEEEEEECSCGGGGGTHHH----HHHHTTTSSEEEEEECHHHHHHSCHHHHGGGSSE-EECTTCSSSCCCCHHHHHHHCS
T ss_pred CEEEEEEECHHHHHHHHHH----HHHHHHCCCEEEEEEchhHHHHHHHHHHHHhcCC-EeccccccCCCcCcccccccCC
Confidence 3489999999998887543 34455544456655532211 12234455555 3433221 123345567899
Q ss_pred EEEe-CCC--------CCCCCChHHHHHHHcCCcEEecC
Q 039338 384 IFVN-PTL--------RPQGLDLTLMEAMMSGKPVMASR 413 (493)
Q Consensus 384 v~v~-ps~--------~~eg~~~~~~EAm~~G~PvI~s~ 413 (493)
++|. |.. .+-.=.+...=+++.++|+|...
T Consensus 84 ~~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~P 122 (194)
T 1p3y_1 84 IYCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFP 122 (194)
T ss_dssp EEEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEE
T ss_pred EEEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEE
Confidence 8776 421 11111223333456889988764
No 155
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=56.65 E-value=62 Score=24.52 Aligned_cols=76 Identities=12% Similarity=0.020 Sum_probs=44.4
Q ss_pred HHHHHHHH--HcCEEEeCCCCCCCCChHHHHHHH-----cCCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYN--AIDIFVNPTLRPQGLDLTLMEAMM-----SGKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~--~adv~v~ps~~~eg~~~~~~EAm~-----~G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
++..+.+. ..|++++-..-++.-|..+++.+. .+.|+|..-..... .+....|..+++..| +.++|..+
T Consensus 36 ~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 115 (140)
T 3n53_A 36 KEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLLSR 115 (140)
T ss_dssp HHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHHHH
Confidence 44444443 357777643223444566777765 46677764222111 134556778999999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|..++..
T Consensus 116 i~~~~~~ 122 (140)
T 3n53_A 116 IEIHLRT 122 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998875
No 156
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=56.56 E-value=63 Score=24.50 Aligned_cols=76 Identities=14% Similarity=0.129 Sum_probs=45.6
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEec-CCCCCccceee--eCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMAS-RFPSIKGTIVV--DDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s-~~~~~~~e~v~--~~~~G~~~~~-d~~~l~~~ 441 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. .+|||.. ........... .+..+++..| +.++|..+
T Consensus 37 ~~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~ 116 (138)
T 3c3m_A 37 EECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKPLTPEEANEYGSYIEDYILKPTTHHQLYEA 116 (138)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSCCCHHHHHHTTTTCSEEEECCCHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCCChHHHHHHhhcCHhheEeCCCCHHHHHHH
Confidence 454455544 477776332234446778888753 5677654 32222111111 1235899999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|..++..
T Consensus 117 i~~~~~~ 123 (138)
T 3c3m_A 117 IEHVLAR 123 (138)
T ss_dssp HHHHHSC
T ss_pred HHHHHHH
Confidence 9998865
No 157
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=56.11 E-value=57 Score=24.54 Aligned_cols=77 Identities=10% Similarity=0.174 Sum_probs=48.4
Q ss_pred HHHHHHHHHH---cCEEEeCCCCCCCCChHHHHHHHc----CCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHH
Q 039338 372 PAELRAFYNA---IDIFVNPTLRPQGLDLTLMEAMMS----GKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHK 440 (493)
Q Consensus 372 ~~~~~~~~~~---adv~v~ps~~~eg~~~~~~EAm~~----G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~ 440 (493)
.++....+.. .|++++-..-++.-|..+++.+.. .+|+|........ .+.+..|..+++..| +.++|..
T Consensus 40 ~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~ 119 (136)
T 3hdv_A 40 AEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLE 119 (136)
T ss_dssp HHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCCCHHHHHH
Confidence 3455444443 467776432234556778877754 3577664322222 123455788999999 9999999
Q ss_pred HHHHHHHc
Q 039338 441 TLEAAVSE 448 (493)
Q Consensus 441 ~i~~ll~~ 448 (493)
+|.++...
T Consensus 120 ~i~~~~~~ 127 (136)
T 3hdv_A 120 LVNKELKI 127 (136)
T ss_dssp HHHHHHC-
T ss_pred HHHHHhcC
Confidence 99999876
No 158
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=55.94 E-value=12 Score=31.75 Aligned_cols=40 Identities=10% Similarity=-0.010 Sum_probs=29.1
Q ss_pred ceEEEEEeccCCCCCCCCchHH-HHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMER-HAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~-~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.+||++-.. . +++.. ....+.+.|.+.|++|+++.+....
T Consensus 7 ~k~I~lgiT------G-s~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 7 GKHVGFGLT------G-SHCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TCEEEEECC------S-CGGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCEEEEEEE------C-hHHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 457777654 1 23333 5899999999999999999876554
No 159
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=55.84 E-value=67 Score=24.62 Aligned_cols=76 Identities=13% Similarity=0.098 Sum_probs=46.7
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH-------cCCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM-------SGKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLH 439 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~-------~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~ 439 (493)
++..+.+.. .|++++-..-++.-|..+++.+. -.+|+|........+ +....|..+++..| +.++|.
T Consensus 48 ~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~ 127 (143)
T 3m6m_D 48 EQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKLL 127 (143)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHHHcChhheeeCCCCHHHHH
Confidence 444455443 57777643223445677777774 136777653322221 23345778999999 999999
Q ss_pred HHHHHHHHc
Q 039338 440 KTLEAAVSE 448 (493)
Q Consensus 440 ~~i~~ll~~ 448 (493)
++|.++...
T Consensus 128 ~~l~~~~~~ 136 (143)
T 3m6m_D 128 DTLADLAVS 136 (143)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHHh
Confidence 999988654
No 160
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=55.20 E-value=63 Score=24.13 Aligned_cols=76 Identities=16% Similarity=0.034 Sum_probs=47.5
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCc--cceeeeCcceEEECC-CHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIK--GTIVVDDEFGFMFAP-NVESLHKTL 442 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~--~e~v~~~~~G~~~~~-d~~~l~~~i 442 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. ++|||........ .+....+..+++..| +.++|.++|
T Consensus 37 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i 116 (133)
T 3nhm_A 37 ASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPPVLIAQL 116 (133)
T ss_dssp HHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCCHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCHHHHHHHH
Confidence 444444433 477776432234456777777765 5777664321111 133455677899999 999999999
Q ss_pred HHHHHc
Q 039338 443 EAAVSE 448 (493)
Q Consensus 443 ~~ll~~ 448 (493)
.+++..
T Consensus 117 ~~~l~~ 122 (133)
T 3nhm_A 117 HALLAR 122 (133)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999876
No 161
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=54.99 E-value=66 Score=24.32 Aligned_cols=76 Identities=16% Similarity=0.088 Sum_probs=48.6
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEec-CCCCCc--cceeeeCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMAS-RFPSIK--GTIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s-~~~~~~--~e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
++....+.. .|++++-..-++.-|..+++.+.. ++|+|.. ...... .+.+..+..+++..| +.++|.++
T Consensus 44 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~ 123 (143)
T 3cnb_A 44 FDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKT 123 (143)
T ss_dssp HHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHH
Confidence 455555543 577776432234446677777765 5677654 322211 123456778999999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|.+++..
T Consensus 124 i~~~~~~ 130 (143)
T 3cnb_A 124 IKQLVEQ 130 (143)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999876
No 162
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=54.76 E-value=9.9 Score=33.13 Aligned_cols=39 Identities=23% Similarity=0.183 Sum_probs=29.6
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
|||++ +.. ..-|-...+.+|+..|+++|+.|.++-....
T Consensus 1 mkI~v-s~k-----GGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MKLAV-AGK-----GGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CEEEE-ECS-----SSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CEEEE-ecC-----CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 78888 532 3345566678899999999999999987653
No 163
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=54.59 E-value=14 Score=30.48 Aligned_cols=39 Identities=8% Similarity=0.018 Sum_probs=28.5
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
+||++... . +........+++.|.+.|++|+++.+....
T Consensus 6 k~IllgvT------G-s~aa~k~~~ll~~L~~~g~~V~vv~T~~A~ 44 (175)
T 3qjg_A 6 ENVLICLC------G-SVNSINISHYIIELKSKFDEVNVIASTNGR 44 (175)
T ss_dssp CEEEEEEC------S-SGGGGGHHHHHHHHTTTCSEEEEEECTGGG
T ss_pred CEEEEEEe------C-HHHHHHHHHHHHHHHHCCCEEEEEECcCHH
Confidence 57777764 2 223335788999999999999999876544
No 164
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=54.37 E-value=13 Score=33.26 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=29.3
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
||||+.... |=..--+..|+++|.+.| +|+|+.+..+.
T Consensus 1 M~ILlTNDD-------Gi~ApGi~aL~~aL~~~g-~V~VVAP~~~q 38 (280)
T 1l5x_A 1 MKILVTNDD-------GVHSPGLRLLYQFALSLG-DVDVVAPESPK 38 (280)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHGGGS-EEEEEEESSCT
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 789888763 223345888999999988 99999987766
No 165
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=54.35 E-value=15 Score=31.64 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=26.6
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
+||+++|+. ..||.+. .+++.|.++|++|.+....
T Consensus 1 ~~k~vlITG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 1 EMKVAVITG------ASRGIGE---AIARALARDGYALALGARS 35 (235)
T ss_dssp CCCEEEEES------CSSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 367888885 4567665 5889999999998887654
No 166
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=54.33 E-value=21 Score=29.72 Aligned_cols=39 Identities=21% Similarity=0.251 Sum_probs=30.1
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHh-CCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALAR-RGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~ 127 (493)
|||++|..+ ..|-....+..+++.+.+ .|++|.++....
T Consensus 2 mkilii~~S-----~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~ 41 (198)
T 3b6i_A 2 AKVLVLYYS-----MYGHIETMARAVAEGASKVDGAEVVVKRVPE 41 (198)
T ss_dssp CEEEEEECC-----SSSHHHHHHHHHHHHHHTSTTCEEEEEECCC
T ss_pred CeEEEEEeC-----CCcHHHHHHHHHHHHHhhcCCCEEEEEEccc
Confidence 689999763 345566677788889888 899999987654
No 167
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=53.79 E-value=8.5 Score=32.90 Aligned_cols=104 Identities=12% Similarity=0.104 Sum_probs=50.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW 161 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (493)
|||+++... +| ..+..|.+++.+. +++|..+.+.... ....+.- ...+.+...+.. ..+
T Consensus 1 ~riaVl~SG-------~G--s~L~aLi~~~~~~~~~~~I~~Vvs~~~~--~~~~~~A-----~~~gIp~~~~~~---~~~ 61 (209)
T 1meo_A 1 ARVAVLISG-------TG--SNLQALIDSTREPNSSAQIDIVISNKAA--VAGLDKA-----ERAGIPTRVINH---KLY 61 (209)
T ss_dssp CEEEEEESS-------SC--TTHHHHHHHHHSTTCSCEEEEEEESSTT--CHHHHHH-----HHTTCCEEECCG---GGS
T ss_pred CeEEEEEEC-------Cc--hHHHHHHHHHhcCCCCcEEEEEEeCCCC--hHHHHHH-----HHcCCCEEEECc---ccc
Confidence 578888741 22 2356667766654 6898777765543 1111110 011222221111 111
Q ss_pred ccccc-hHHHHHHhcCCCCcEEEeCcc--chhHHhhhccCcEEEEecc
Q 039338 162 RYSKG-WEQFDEENQREPFDVVHSESV--ALPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 162 ~~~~~-~~~~~~~~~~~~~DiI~~~~~--~~~~~~~~~~p~~v~~~h~ 206 (493)
..... -..+.+.+++.+||+|++.++ -++.-+....+.-++.+|.
T Consensus 62 ~~r~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 109 (209)
T 1meo_A 62 KNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHP 109 (209)
T ss_dssp SSHHHHHHHHHHHHHHTTCCEEEEESCCSCCCHHHHHHTTTSEEEEES
T ss_pred CchhhhhHHHHHHHHhcCCCEEEEcchhhhCCHHHHhhhcCCEEEEcc
Confidence 11111 134556667889999988765 2333332333334677775
No 168
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=53.78 E-value=19 Score=28.18 Aligned_cols=44 Identities=16% Similarity=0.018 Sum_probs=31.9
Q ss_pred ce-EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TL-KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~m-kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.| |++++...=| ..+-..+..+.++.++...|++|.|+...+.-
T Consensus 4 ~Mkk~~ivv~~~P---~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV 48 (136)
T 2hy5_B 4 VVKKFMYLNRKAP---YGTIYAWEALEVVLIGAAFDQDVCVLFLDDGV 48 (136)
T ss_dssp -CCEEEEEECSCT---TTSSHHHHHHHHHHHHGGGCCEEEEEECGGGG
T ss_pred chhEEEEEEeCCC---CCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHH
Confidence 47 4888887533 33335666888999999999999999876544
No 169
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=53.63 E-value=26 Score=28.36 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=29.1
Q ss_pred CCCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 79 PSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 79 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
+.+.+|||++=++. +|.+ .=..+.+.|.++||+|.=+.+..
T Consensus 17 ~~~~~MkIaIgsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~~~ 57 (166)
T 3s5p_A 17 QGPGSMKVAFASDH-------GGRD-LRMFLQQRASAHGYEVMDLGTES 57 (166)
T ss_dssp --CTTCEEEEEECG-------GGHH-HHHHHHHHHHHTTCEEEEEEC--
T ss_pred CCCCceEEEEEECc-------hHHH-HHHHHHHHHHHCCCEEEEcCCCC
Confidence 34567999988863 5655 35668899999999998887643
No 170
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=53.60 E-value=31 Score=26.50 Aligned_cols=35 Identities=9% Similarity=0.075 Sum_probs=23.7
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
++++||+++... ......+...|.+.|+++.+.+.
T Consensus 3 ~~~~~ILivdd~----------~~~~~~l~~~L~~~~~~~~v~~~ 37 (144)
T 3kht_A 3 LRSKRVLVVEDN----------PDDIALIRRVLDRKDIHCQLEFV 37 (144)
T ss_dssp --CEEEEEECCC----------HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEEEeCC----------HHHHHHHHHHHHhcCCCeeEEEE
Confidence 346889999763 33466788888889988555443
No 171
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=53.39 E-value=14 Score=33.03 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=26.1
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.|||++.. . |+.+. .+++.|.++||+|++++.....
T Consensus 3 ~~~ilVtG-------a-G~iG~---~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAG-------C-GDLGL---ELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEEC-------C-SHHHH---HHHHHHHHTTCCEEEEECTTSC
T ss_pred CCcEEEEC-------C-CHHHH---HHHHHHHHCCCEEEEEeCCccc
Confidence 46777663 2 66555 4888999999999999865443
No 172
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=53.29 E-value=9.5 Score=33.57 Aligned_cols=34 Identities=15% Similarity=0.127 Sum_probs=25.5
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
||+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 1 Mk~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~~r~ 34 (254)
T 1zmt_A 1 MSTAIVTN------VKHFGGMG---SALRLSEAGHTVACHDES 34 (254)
T ss_dssp -CEEEESS------TTSTTHHH---HHHHHHHTTCEEEECCGG
T ss_pred CeEEEEeC------CCchHHHH---HHHHHHHCCCEEEEEeCC
Confidence 77888885 55777754 889999999998876543
No 173
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=52.62 E-value=78 Score=24.47 Aligned_cols=76 Identities=11% Similarity=0.082 Sum_probs=44.4
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCCCCCcc---ceeeeC-cceEEECC-CHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRFPSIKG---TIVVDD-EFGFMFAP-NVESLHKTL 442 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~~~~~~---e~v~~~-~~G~~~~~-d~~~l~~~i 442 (493)
++....+.. .|++++-..-++.-|..+++.+. ..+|||........+ +.+..+ ..+++..| +.++|..+|
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP~~~~~L~~~i 120 (154)
T 2rjn_A 41 LDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLLKPWEDEDVFKVV 120 (154)
T ss_dssp HHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEESSCCHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeeeCCCCHHHHHHHH
Confidence 344444432 47776633222334556666654 367776643222111 223344 67899999 999999999
Q ss_pred HHHHHc
Q 039338 443 EAAVSE 448 (493)
Q Consensus 443 ~~ll~~ 448 (493)
..++..
T Consensus 121 ~~~~~~ 126 (154)
T 2rjn_A 121 EKGLQL 126 (154)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
No 174
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=52.60 E-value=15 Score=33.64 Aligned_cols=42 Identities=21% Similarity=0.060 Sum_probs=29.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFT 124 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 124 (493)
.++|||+++.... .......-.....++++|.+.||+|..+.
T Consensus 11 ~~~~~v~vl~gg~--s~E~~vsl~s~~~v~~al~~~g~~v~~i~ 52 (317)
T 4eg0_A 11 KRFGKVAVLFGGE--SAEREVSLTSGRLVLQGLRDAGIDAHPFD 52 (317)
T ss_dssp GGGCEEEEECCCS--STTHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhcceEEEEECCC--CCcceeeHHHHHHHHHHHHHCCCEEEEEe
Confidence 3578999998632 11111112356789999999999999987
No 175
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=52.59 E-value=75 Score=24.20 Aligned_cols=76 Identities=13% Similarity=0.053 Sum_probs=46.4
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCcc---ceeeeCcceEEECC--CHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIKG---TIVVDDEFGFMFAP--NVESLHK 440 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~~---e~v~~~~~G~~~~~--d~~~l~~ 440 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. ++|+|........+ +.+..|..+++..+ +.++|.+
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~ 120 (144)
T 3kht_A 41 AKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYG 120 (144)
T ss_dssp HHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHH
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHH
Confidence 444444433 477776432224446677777765 56777653322221 23455778888887 7899999
Q ss_pred HHHHHHHc
Q 039338 441 TLEAAVSE 448 (493)
Q Consensus 441 ~i~~ll~~ 448 (493)
+|.+++..
T Consensus 121 ~i~~~l~~ 128 (144)
T 3kht_A 121 RIYAIFSY 128 (144)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888764
No 176
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=52.45 E-value=17 Score=30.37 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=23.8
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.+|||++.. ..||.++. +++.|. +|++|.++...
T Consensus 2 ~kM~vlVtG-------asg~iG~~---~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLIG-------ASGTLGSA---VKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEET-------TTSHHHHH---HHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEEc-------CCcHHHHH---HHHHHH-CCCeEEEEecC
Confidence 358866553 34666654 788888 89999887643
No 177
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=51.92 E-value=43 Score=26.22 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=23.1
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEE
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIF 123 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~ 123 (493)
.+++||+++... ......+.+.|.+.|++|..+
T Consensus 5 ~~~~~ILivdd~----------~~~~~~l~~~L~~~g~~v~~~ 37 (154)
T 3gt7_A 5 NRAGEILIVEDS----------PTQAEHLKHILEETGYQTEHV 37 (154)
T ss_dssp --CCEEEEECSC----------HHHHHHHHHHHHTTTCEEEEE
T ss_pred cCCCcEEEEeCC----------HHHHHHHHHHHHHCCCEEEEe
Confidence 346899999863 334666788888889987654
No 178
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=51.82 E-value=20 Score=31.42 Aligned_cols=36 Identities=6% Similarity=-0.010 Sum_probs=26.7
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|+++|+. ..||.++ .+++.|.++|++|.++......
T Consensus 23 k~vlITG------as~gIG~---~la~~l~~~G~~V~~~~r~~~~ 58 (251)
T 3orf_A 23 KNILVLG------GSGALGA---EVVKFFKSKSWNTISIDFRENP 58 (251)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESSCCT
T ss_pred CEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeCCccc
Confidence 6777774 4467665 5889999999999888765443
No 179
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=51.34 E-value=1.2e+02 Score=26.04 Aligned_cols=134 Identities=11% Similarity=0.077 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc--CcEEEe-cCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHH
Q 039338 327 PLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG--HQVLVM-GSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAM 403 (493)
Q Consensus 327 ~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~--~~V~~~-g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm 403 (493)
+.....++.|.+.+. .+.++.... .+.++++. .+|.+. +....++ +..+|+++..+-. ......+.++.
T Consensus 41 ~va~~ka~~Ll~~GA--~VtVvap~~-~~~l~~l~~~~~i~~i~~~~~~~d----L~~adLVIaAT~d-~~~N~~I~~~a 112 (223)
T 3dfz_A 41 TIATRRIKGFLQEGA--AITVVAPTV-SAEINEWEAKGQLRVKRKKVGEED----LLNVFFIVVATND-QAVNKFVKQHI 112 (223)
T ss_dssp HHHHHHHHHHGGGCC--CEEEECSSC-CHHHHHHHHTTSCEEECSCCCGGG----SSSCSEEEECCCC-THHHHHHHHHS
T ss_pred HHHHHHHHHHHHCCC--EEEEECCCC-CHHHHHHHHcCCcEEEECCCCHhH----hCCCCEEEECCCC-HHHHHHHHHHH
Confidence 444555666766544 455555432 23344443 345544 3344333 4679998876632 33444555555
Q ss_pred HcCCcEEecCCCCCcc----ceeeeCcceEEECC--CHHHHHHH----HHHHHHcCcHHHHHHHHHHHHHHHHhc
Q 039338 404 MSGKPVMASRFPSIKG----TIVVDDEFGFMFAP--NVESLHKT----LEAAVSEGPMRLAQRGEACRQYAASMF 468 (493)
Q Consensus 404 ~~G~PvI~s~~~~~~~----e~v~~~~~G~~~~~--d~~~l~~~----i~~ll~~~~~~~~~~~~~~~~~~~~~f 468 (493)
..|+||-..|.+.... .++..+..-+-+.. ..-.++.. |++++...-..+.+.....|+.+++.+
T Consensus 113 k~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~lp~~~~~~~~~~~~~R~~vk~~~ 187 (223)
T 3dfz_A 113 KNDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNYDESYTQYTQFLYECRVLIHRLN 187 (223)
T ss_dssp CTTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTHHHHHHHHHHHHHHHHHHCC
T ss_pred hCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHC
Confidence 5899998887655441 24445544444443 22344444 444432212334444555666666544
No 180
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=51.34 E-value=28 Score=25.29 Aligned_cols=73 Identities=12% Similarity=0.154 Sum_probs=43.8
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH-----cCCcEEec-CCCCCccceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM-----SGKPVMAS-RFPSIKGTIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~-----~G~PvI~s-~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++....+.. .|++++-..-++.-|..+++.+. .++|+|.. ...... +....+..+++..| +.+++.+.+.
T Consensus 35 ~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~~~-~~~~~g~~~~l~kp~~~~~l~~~l~ 113 (119)
T 2j48_A 35 STALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEPPVD-PLLTAQASAILSKPLDPQLLLTTLQ 113 (119)
T ss_dssp HHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSCCSS-HHHHHHCSEECSSCSTTHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCCCch-hhhhcCHHHhccCCCCHHHHHHHHH
Confidence 444444433 57777643222344667777775 35676654 332222 34455667888888 9999999887
Q ss_pred HHH
Q 039338 444 AAV 446 (493)
Q Consensus 444 ~ll 446 (493)
+++
T Consensus 114 ~~~ 116 (119)
T 2j48_A 114 GLC 116 (119)
T ss_dssp TTC
T ss_pred HHh
Confidence 664
No 181
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=51.28 E-value=16 Score=34.43 Aligned_cols=45 Identities=16% Similarity=0.108 Sum_probs=28.9
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHH-HhCCCEEEEEecCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVAL-ARRGHRVHIFTSPV 127 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L-~~~G~~V~v~~~~~ 127 (493)
|.+|||+++.... .....-.-.....++++| .+.||+|+.+....
T Consensus 1 m~k~~v~vl~gG~--s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~~ 46 (377)
T 1ehi_A 1 MTKKRVALIFGGN--SSEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQ 46 (377)
T ss_dssp --CEEEEEEEECS--STTHHHHHHHHHHHHHHHHHHSSEEEEEEEECT
T ss_pred CCCcEEEEEeCCC--CCCcceeHHHHHHHHHHhCcccCcEEEEEEEcC
Confidence 3479999998631 001101112467889999 99999999997654
No 182
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=51.23 E-value=17 Score=28.84 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=25.1
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.+.||+++.. ++.-..+++.|.+.|++|+++...
T Consensus 2 ~~~~vlI~G~-----------G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH-----------SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC-----------SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC-----------CHHHHHHHHHHHHCCCCEEEEECC
Confidence 3456777732 334567889999999999999864
No 183
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=51.22 E-value=61 Score=28.41 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=26.8
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|||+.... |=..--+..|+++|.+.| +|+|+++..+.
T Consensus 3 ~ILlTNDD-------Gi~apGi~~L~~~l~~~g-~V~VvAP~~~~ 39 (251)
T 2wqk_A 3 TFLLVNDD-------GYFSPGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp EEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred EEEEEcCC-------CCCcHHHHHHHHHHHhCC-CEEEEeeCCCC
Confidence 67776653 222334788999999998 69999987766
No 184
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=51.21 E-value=15 Score=27.94 Aligned_cols=43 Identities=9% Similarity=0.031 Sum_probs=30.6
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC--CEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG--HRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~ 129 (493)
.||++++...-+ ......++..++....++| +||.++......
T Consensus 7 ~~K~~ivi~s~d----~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v 51 (117)
T 2fb6_A 7 NDKLTILWTTDN----KDTVFNMLAMYALNSKNRGWWKHINIILWGASV 51 (117)
T ss_dssp TSEEEEEECCCC----HHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHH
T ss_pred CCeEEEEEEcCC----hHHHHHHHHHHHHHHHHcCCCCcEEEEEECCee
Confidence 489999887521 1222245888999999999 799999866544
No 185
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=50.71 E-value=11 Score=33.75 Aligned_cols=59 Identities=14% Similarity=0.224 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcccee---e--eCcceEEECC
Q 039338 373 AELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIV---V--DDEFGFMFAP 433 (493)
Q Consensus 373 ~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v---~--~~~~G~~~~~ 433 (493)
+++.+++..+|+++.-+. ++..--.+..++..|+|+|+...|... +.. . ....++++.+
T Consensus 65 ~dl~~ll~~~DVVIDfT~-p~a~~~~~~~al~~G~~vVigTTG~s~-~~~~~L~~aa~~~~vv~a~ 128 (272)
T 4f3y_A 65 DDIERVCAEADYLIDFTL-PEGTLVHLDAALRHDVKLVIGTTGFSE-PQKAQLRAAGEKIALVFSA 128 (272)
T ss_dssp CCHHHHHHHCSEEEECSC-HHHHHHHHHHHHHHTCEEEECCCCCCH-HHHHHHHHHTTTSEEEECS
T ss_pred CCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEECCCCCH-HHHHHHHHHhccCCEEEEC
Confidence 567777889999998663 344334566789999999987665433 211 1 1345677766
No 186
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=50.70 E-value=25 Score=28.48 Aligned_cols=39 Identities=23% Similarity=0.151 Sum_probs=27.0
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
++.||++.+.. ..+...-..-++..|...||+|+.+...
T Consensus 17 ~~~~vlla~~~------gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMG------LDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEES------SSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCEEEEEeCC------CCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 45678888762 1334444666778899999999876544
No 187
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=50.47 E-value=10 Score=35.16 Aligned_cols=45 Identities=9% Similarity=-0.000 Sum_probs=29.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|++|||+++.... ..+..-.-.....++++|.+.||+|..+....
T Consensus 1 m~~~~v~vl~gG~--s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (343)
T 1e4e_A 1 MNRIKVAILFGGC--SEEHDVSVKSAIEIAANINKEKYEPLYIGITK 45 (343)
T ss_dssp -CCEEEEEEEECS--STTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred CCCcEEEEEeCCC--CCCcchhHHHHHHHHHHhhhcCCEEEEEEEcC
Confidence 3579999998532 00111111145678999999999999987654
No 188
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=49.92 E-value=63 Score=26.06 Aligned_cols=38 Identities=16% Similarity=-0.031 Sum_probs=26.0
Q ss_pred HHHHHHcCEEEeC---CCCCCCCChHHHH---HHHcCCcEEecC
Q 039338 376 RAFYNAIDIFVNP---TLRPQGLDLTLME---AMMSGKPVMASR 413 (493)
Q Consensus 376 ~~~~~~adv~v~p---s~~~eg~~~~~~E---Am~~G~PvI~s~ 413 (493)
.+.+..||++|.- ....+.=+.|.+| |.+.|+|||+-.
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 5889999998763 2111233447777 588999999854
No 189
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=49.80 E-value=54 Score=28.28 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=26.4
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHh-CCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALAR-RGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~ 127 (493)
+||.++|+. ..||.++ .+++.|.+ .|+.|.+.....
T Consensus 3 ~~k~vlITG------as~gIG~---~~a~~l~~~~g~~v~~~~~~~ 39 (244)
T 4e4y_A 3 AMANYLVTG------GSKGIGK---AVVELLLQNKNHTVINIDIQQ 39 (244)
T ss_dssp CCEEEEEET------TTSHHHH---HHHHHHTTSTTEEEEEEESSC
T ss_pred CCCeEEEeC------CCChHHH---HHHHHHHhcCCcEEEEecccc
Confidence 578888885 5577775 48889988 788888765443
No 190
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=49.79 E-value=19 Score=32.55 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=24.4
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||++.. ..|+.+. .+++.|.++||+|.++....
T Consensus 1 m~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~ 34 (312)
T 3ko8_A 1 MRIVVTG-------GAGFIGS---HLVDKLVELGYEVVVVDNLS 34 (312)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEECCCS
T ss_pred CEEEEEC-------CCChHHH---HHHHHHHhCCCEEEEEeCCC
Confidence 6776653 3366554 48899999999999886543
No 191
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=49.48 E-value=30 Score=28.62 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=29.4
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHh-CCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALAR-RGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~ 126 (493)
|||+++..+ ..|..+..+..+++.+.+ .|++|.++...
T Consensus 5 ~kiliiy~S-----~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 5 GKVLVIYDT-----RTGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp EEEEEEECC-----SSSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CEEEEEEEC-----CCcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 689998753 446667777888999988 89999988653
No 192
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=49.28 E-value=1.1e+02 Score=26.29 Aligned_cols=66 Identities=9% Similarity=0.077 Sum_probs=43.6
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHH
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVS 447 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~ 447 (493)
.|++++-..-++.-|..+++.+.. .+|||........+ +.+..|..+++..| +.++|..+|..++.
T Consensus 68 ~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~Kp~~~~~L~~~i~~~~~ 140 (250)
T 3r0j_A 68 PDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILR 140 (250)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 577776432234456677777653 46776643222221 23456788999999 99999999999876
No 193
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=49.25 E-value=27 Score=29.17 Aligned_cols=41 Identities=15% Similarity=0.004 Sum_probs=28.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHH-HHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVA-LARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~-L~~~G~~V~v~~~~~ 127 (493)
|||++|..+- ...|-....+..+++. +.+.|++|.++....
T Consensus 3 mkilii~gS~---r~~g~t~~la~~i~~~~l~~~g~~v~~~dl~~ 44 (197)
T 2vzf_A 3 YSIVAISGSP---SRNSTTAKLAEYALAHVLARSDSQGRHIHVID 44 (197)
T ss_dssp EEEEEEECCS---STTCHHHHHHHHHHHHHHHHSSEEEEEEEGGG
T ss_pred ceEEEEECCC---CCCChHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 7999998741 1234455556667788 888899999987644
No 194
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=49.22 E-value=9.3 Score=35.86 Aligned_cols=46 Identities=15% Similarity=-0.006 Sum_probs=29.2
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
|++|||+++.... .....-.-.....++++|.+.||+|..+.....
T Consensus 1 m~~~~v~vl~gg~--s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~ 46 (364)
T 2i87_A 1 MTKENICIVFGGK--SAEHEVSILTAQNVLNAIDKDKYHVDIIYITND 46 (364)
T ss_dssp --CEEEEEEEECS--SSCHHHHHHHHHHHHHTSCTTTEEEEEEEECTT
T ss_pred CCCcEEEEEECCC--CccchhHHHHHHHHHHHHhhcCCEEEEEEEcCC
Confidence 3579999998632 001111113457789999999999999876543
No 195
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=49.21 E-value=17 Score=31.08 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=25.8
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||+++. .+..-..+++.|.+.|++|+++....
T Consensus 1 M~iiIiG-----------~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIG-----------GETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEEC-----------CHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEEC-----------CCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 6777773 24567789999999999999998654
No 196
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=49.15 E-value=50 Score=26.89 Aligned_cols=34 Identities=32% Similarity=0.253 Sum_probs=22.6
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEE
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIF 123 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~ 123 (493)
.+.++||++|-.+ ......+...|.+.|++|..+
T Consensus 4 ~m~~~~iLivdd~----------~~~~~~l~~~L~~~g~~v~~~ 37 (184)
T 3rqi_A 4 SMSDKNFLVIDDN----------EVFAGTLARGLERRGYAVRQA 37 (184)
T ss_dssp ---CCEEEEECSC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCeEEEEcCC----------HHHHHHHHHHHHHCCCEEEEe
Confidence 3556899999763 334566778888889987543
No 197
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=49.12 E-value=23 Score=30.71 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=26.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|+++|+. ..||.++ .+++.|.++|++|.++.....
T Consensus 7 ~k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 7 ARRVLVYG------GRGALGS---RCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp CCEEEEET------TTSHHHH---HHHHHHHTTTCEEEEEESSCC
T ss_pred CCEEEEEC------CCcHHHH---HHHHHHHhCCCEEEEEeCChh
Confidence 45667774 4567665 488999999999988876543
No 198
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=49.03 E-value=24 Score=27.64 Aligned_cols=41 Identities=12% Similarity=-0.031 Sum_probs=27.6
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
+.||++.+.. .-+...-..-++..|...|++|.-+....+.
T Consensus 3 ~~~vvla~~~------~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~ 43 (137)
T 1ccw_A 3 KKTIVLGVIG------SDCHAVGNKILDHAFTNAGFNVVNIGVLSPQ 43 (137)
T ss_dssp CCEEEEEEET------TCCCCHHHHHHHHHHHHTTCEEEEEEEEECH
T ss_pred CCEEEEEeCC------CchhHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 4567777652 1244455667788999999999977664333
No 199
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=48.99 E-value=22 Score=32.54 Aligned_cols=38 Identities=13% Similarity=0.224 Sum_probs=27.4
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
..+.|+|++.. ..|+.+.. +++.|.++||+|.++....
T Consensus 17 ~~~~~~vlVTG-------asG~iG~~---l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 17 RGSHMRILITG-------GAGCLGSN---LIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TTTCCEEEEET-------TTSHHHHH---HHHHHGGGTCEEEEEECCS
T ss_pred cCCCCEEEEEC-------CCCHHHHH---HHHHHHHCCCEEEEEECCC
Confidence 44568877664 34666654 8889999999999987643
No 200
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=48.73 E-value=25 Score=26.91 Aligned_cols=67 Identities=13% Similarity=0.269 Sum_probs=43.0
Q ss_pred cCEEEeCCCCC-CCCChHHHHHHHc-----CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRP-QGLDLTLMEAMMS-----GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~-eg~~~~~~EAm~~-----G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-+ +.-|..+++.+.. .+|||........+ +.+..|..+++..| +.++|.++|.+++..
T Consensus 51 ~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (140)
T 3lua_A 51 ITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYPTKRLENSVRSVLKI 127 (140)
T ss_dssp CSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCCTTHHHHHHHHHHCC
T ss_pred CcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHh
Confidence 47777643222 2234566666554 67777653222221 23456778999999 999999999999876
No 201
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=48.68 E-value=21 Score=30.93 Aligned_cols=34 Identities=26% Similarity=0.517 Sum_probs=26.1
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
||+++|+. ..||.++ .+++.|+++|++|.++...
T Consensus 3 ~k~vlVTG------as~GIG~---a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTG------AGSGLGR---ALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEECC
Confidence 56778875 5577775 4889999999999887654
No 202
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=48.61 E-value=9.8 Score=36.03 Aligned_cols=33 Identities=21% Similarity=0.482 Sum_probs=24.4
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|||+||.. .+.| ..++..|+++|++|+|+-..
T Consensus 1 sm~V~IVGa------GpaG-----l~~A~~L~~~G~~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGA------GIGG-----TCLAHGLRKHGIKVTIYERN 33 (412)
T ss_dssp CCEEEEECC------SHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECc------CHHH-----HHHHHHHHhCCCCEEEEecC
Confidence 389999964 2233 44778899999999998543
No 203
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=48.59 E-value=16 Score=33.15 Aligned_cols=44 Identities=11% Similarity=0.012 Sum_probs=28.6
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.+|||+++.... .......-.....++++|.+.||+|..+....
T Consensus 2 ~~m~v~vl~gg~--s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (307)
T 3r5x_A 2 NAMRIGVIMGGV--SSEKQVSIMTGNEMIANLDKNKYEIVPITLNE 45 (307)
T ss_dssp CCEEEEEEECCS--HHHHHHHHHHHHHHHHHSCTTTEEEEEEECSS
T ss_pred CCcEEEEEeCCC--CcchHhHHHHHHHHHHHHHHCCCEEEEEcccC
Confidence 479999998411 00001112336678899999999999987653
No 204
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=48.57 E-value=14 Score=31.27 Aligned_cols=41 Identities=7% Similarity=0.041 Sum_probs=24.9
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEE-EEec
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVH-IFTS 125 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~-v~~~ 125 (493)
|.+|||++|..+ +..+|....+.+.+....+.|++|. ++..
T Consensus 4 M~~mkIl~I~GS----~r~~s~t~~la~~~~~~~~~g~~v~~~idL 45 (199)
T 4hs4_A 4 TSPLHFVTLLGS----LRKASFNAAVARALPEIAPEGIAITPLGSI 45 (199)
T ss_dssp -CCEEEEEEECC----CSTTCHHHHHHHHHHHHCCTTEEEEECCCG
T ss_pred CCCCEEEEEEcC----CCCCChHHHHHHHHHHHccCCCEEEEEEeh
Confidence 457999999985 2456655554444333334688888 5443
No 205
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=48.43 E-value=21 Score=31.66 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=27.1
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
+.++|+++|+. ..||.+. .+++.|.++|++|.+....
T Consensus 23 m~~~k~vlITG------as~gIG~---a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 23 MSDTPVVLVTG------GSRGIGA---AVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp -CCSCEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEcCC
Confidence 44567888885 5567665 5889999999999877543
No 206
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=48.20 E-value=17 Score=33.49 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=24.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.+.|+|++.. ..|+.+. .+++.|.++||+|.++....
T Consensus 17 ~~~~~vlVtG-------atG~iG~---~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 17 RGSHMILVTG-------SAGRVGR---AVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp ----CEEEET-------TTSHHHH---HHHHHHHHTTCCEEEEESSC
T ss_pred cCCCEEEEEC-------CCChHHH---HHHHHHHhCCCEEEEEeCCC
Confidence 3456676663 3366554 48899999999999987543
No 207
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=48.10 E-value=50 Score=30.97 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=26.7
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.+|||+++.. | .....+++++.+.|++|.++.....
T Consensus 10 ~~~~ili~g~--------g---~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 10 AATRVMLLGS--------G---ELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp TCCEEEEESC--------S---HHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCEEEEECC--------C---HHHHHHHHHHHHcCCEEEEEECCCC
Confidence 4589999853 2 1356789999999999988876543
No 208
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=48.03 E-value=27 Score=31.23 Aligned_cols=45 Identities=13% Similarity=0.084 Sum_probs=31.9
Q ss_pred CCceEEEEEeccCCCCCCCCchHHH-HHHHHHHHHhCCCEEEEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERH-AHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~-~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
+..|||++|...- ..+|.... +..+++.+.+.|++|.++......
T Consensus 56 ~~~mKILiI~GS~----R~~S~T~~La~~~~~~l~~~G~eveiidL~dlp 101 (279)
T 2fzv_A 56 APPVRILLLYGSL----RARSFSRLAVEEAARLLQFFGAETRIFDPSDLP 101 (279)
T ss_dssp CSCCEEEEEESCC----SSSCHHHHHHHHHHHHHHHTTCEEEEBCCTTCC
T ss_pred CCCCEEEEEEeCC----CCCCHHHHHHHHHHHHHhhCCCEEEEEehhcCC
Confidence 4579999999852 44565544 455778888889999998765433
No 209
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=47.97 E-value=23 Score=28.70 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=26.2
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
.|||++-+.+ +|.+. =..+.+.|.++||+|.=+.+
T Consensus 3 ~MkIaigsDh-------aG~~l-K~~i~~~L~~~G~eV~D~G~ 37 (162)
T 2vvp_A 3 GMRVYLGADH-------AGYEL-KQRIIEHLKQTGHEPIDCGA 37 (162)
T ss_dssp CCEEEEEECH-------HHHHH-HHHHHHHHHHTTCEEEECSC
T ss_pred CCEEEEEeCc-------hhHHH-HHHHHHHHHHCCCEEEEeCC
Confidence 4899888753 55553 45588899999999887754
No 210
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=47.70 E-value=86 Score=23.60 Aligned_cols=66 Identities=8% Similarity=0.109 Sum_probs=39.3
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecC-CCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASR-FPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~-~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+.. ++|+|... ..... +....-..+++..+ +.++|..+|..++..
T Consensus 61 ~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~-~~~~~~~~~~l~KP~~~~~L~~~i~~~~~~ 131 (138)
T 2b4a_A 61 CDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILTTGRHEL-IESSEHNLSYLQKPFAISELRAAIDYHKPS 131 (138)
T ss_dssp CSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEESCC--C-CCCSSSCEEEEESSCCHHHHHHHHHHTCCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCCCH-HHHHHHHHheeeCCCCHHHHHHHHHHHHHh
Confidence 577776332223346677777754 56776542 21111 11111157889999 999999999988654
No 211
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=47.61 E-value=80 Score=23.09 Aligned_cols=75 Identities=8% Similarity=-0.038 Sum_probs=47.0
Q ss_pred HHHHHHHH--HcCEEEeCCCCC-CCCChHHHHHHH-----cCCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHH
Q 039338 373 AELRAFYN--AIDIFVNPTLRP-QGLDLTLMEAMM-----SGKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHK 440 (493)
Q Consensus 373 ~~~~~~~~--~adv~v~ps~~~-eg~~~~~~EAm~-----~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~ 440 (493)
++..+.+. ..|++++-..-+ ..-|..+++.+. ..+|+|.. .....+ +....|..+++..| +.+++..
T Consensus 39 ~~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~ 117 (127)
T 2gkg_A 39 KGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GNPDGFAQHRKLKAHADEYVAKPVDADQLVE 117 (127)
T ss_dssp HHHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-ECGGGHHHHHHSTTCCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ecCCchhHHHHHHhCcchheeCCCCHHHHHH
Confidence 44444443 257777633222 334567777775 35788877 322221 23455678899999 9999999
Q ss_pred HHHHHHHc
Q 039338 441 TLEAAVSE 448 (493)
Q Consensus 441 ~i~~ll~~ 448 (493)
.+.+++..
T Consensus 118 ~i~~~~~~ 125 (127)
T 2gkg_A 118 RAGALIGF 125 (127)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHcC
Confidence 99988764
No 212
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=47.60 E-value=20 Score=32.84 Aligned_cols=33 Identities=27% Similarity=0.477 Sum_probs=25.0
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|||+++.. |.++.. ++..|++.||+|+++...
T Consensus 2 ~mkI~IiGa--------GaiG~~---~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGT--------GAIGSF---YGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEESC--------CHHHHH---HHHHHHHTTCEEEEECST
T ss_pred CCEEEEECc--------CHHHHH---HHHHHHhCCCeEEEEeCC
Confidence 489999954 555544 778888899999998764
No 213
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=47.43 E-value=30 Score=25.70 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=27.8
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHH---HHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAH---TLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~---~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.|||+.|+. .+.|+....+ .|-++-.++||++.|=+.....
T Consensus 2 ~mkivaVta------CptGiAhTymAAeaLekaA~~~G~~ikVEtqgs~g 45 (106)
T 2m1z_A 2 KRKIIAVTA------CATGVAHTYMAAQALKKGAKKMGNLIKVETQGATG 45 (106)
T ss_dssp CCEEEEEEE------CSSCHHHHHHHHHHHHHHHHHHTCEEEEEEEETTE
T ss_pred CccEEEEEE------CCCcHHHHHHHHHHHHHHHHHCCCEEEEEEecCcc
Confidence 489999986 3355554333 4666666789999998866544
No 214
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=47.34 E-value=12 Score=31.52 Aligned_cols=69 Identities=19% Similarity=0.161 Sum_probs=41.9
Q ss_pred HHHHHHHHcCEEEeCCCCCCCCC--hHHHHHHHcCCcEEecCCCCCccce----eeeC-------cceEEECCCHHHHHH
Q 039338 374 ELRAFYNAIDIFVNPTLRPQGLD--LTLMEAMMSGKPVMASRFPSIKGTI----VVDD-------EFGFMFAPNVESLHK 440 (493)
Q Consensus 374 ~~~~~~~~adv~v~ps~~~eg~~--~~~~EAm~~G~PvI~s~~~~~~~e~----v~~~-------~~G~~~~~d~~~l~~ 440 (493)
.-.-+...||.+|... .|+| ..+.||+..|+||++-+..+.-+.. +.++ ...+.+..|++++.+
T Consensus 111 Rk~~m~~~sda~Ivlp---GG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~ 187 (195)
T 1rcu_A 111 RSFVLLRNADVVVSIG---GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQ 187 (195)
T ss_dssp HHHHHHTTCSEEEEES---CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHH
T ss_pred HHHHHHHhCCEEEEec---CCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHHHH
Confidence 3345566789877632 3455 3478899999999999754432111 2211 123444448898888
Q ss_pred HHHHH
Q 039338 441 TLEAA 445 (493)
Q Consensus 441 ~i~~l 445 (493)
.|.++
T Consensus 188 ~l~~~ 192 (195)
T 1rcu_A 188 IIEQI 192 (195)
T ss_dssp HHHTC
T ss_pred HHHHH
Confidence 87654
No 215
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=47.10 E-value=23 Score=34.97 Aligned_cols=37 Identities=24% Similarity=0.342 Sum_probs=27.2
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.|||++.. ..|+.+. .+++.|.++||+|++++.....
T Consensus 147 ~m~VLVTG-------atG~IG~---~l~~~L~~~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITG-------SRGLVGR---ALTAQLQTGGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEES-------TTSHHHH---HHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEEC-------CCCHHHH---HHHHHHHHCCCEEEEEECCCCC
Confidence 57887764 3355554 5888999999999999876544
No 216
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=46.99 E-value=13 Score=32.98 Aligned_cols=37 Identities=14% Similarity=0.059 Sum_probs=21.4
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFT 124 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 124 (493)
...+|+|++++.. --......++...|. .||+|.++.
T Consensus 27 ~~~~m~ill~~~~-------~~~~~l~q~l~~~l~-~~h~V~~~~ 63 (260)
T 1zgh_A 27 KAGLMNIIIATTK-------SWNIKNAQKFKKENE-SKYNTTIIT 63 (260)
T ss_dssp ---CEEEEEECCS-------HHHHHHHHHHHHHTT-TTEEEEEEC
T ss_pred ccCceEEEEECCh-------HHHHHHHHHHHHHhc-ccCceEEEe
Confidence 4557999999761 011223444555555 689998883
No 217
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=46.90 E-value=91 Score=23.55 Aligned_cols=76 Identities=9% Similarity=0.149 Sum_probs=46.8
Q ss_pred HHHHHHHH--HcCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYN--AIDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~--~adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++..+.+. ..|++++-..-++.-|..+++.+.. .+|+|........+ +.+..|..+++..| +.++|..+|.
T Consensus 38 ~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~ 117 (137)
T 3cfy_A 38 RDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQKGAEDFLEKPINADRLKTSVA 117 (137)
T ss_dssp HHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecCcHHHHHHHHHCCccEEEeCCCCHHHHHHHHH
Confidence 45445444 3688877432234446667776653 56666543222111 23455778999999 9999999998
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
.++..
T Consensus 118 ~~~~~ 122 (137)
T 3cfy_A 118 LHLKR 122 (137)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 218
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=46.86 E-value=47 Score=26.60 Aligned_cols=40 Identities=20% Similarity=0.258 Sum_probs=31.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
..||+++-. +..|..+..+..+++.|.+.|++|.++....
T Consensus 4 ~~kv~IvY~-----S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~ 43 (159)
T 3fni_A 4 ETSIGVFYV-----SEYGYSDRLAQAIINGITKTGVGVDVVDLGA 43 (159)
T ss_dssp CCEEEEEEC-----TTSTTHHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEEEE-----CCChHHHHHHHHHHHHHHHCCCeEEEEECcC
Confidence 346777754 2568889999999999999999999886553
No 219
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=46.69 E-value=21 Score=28.09 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=28.4
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFT 124 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 124 (493)
|||+++-. +..|..+..+..+++.|.+.|++|.++.
T Consensus 2 ~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 2 ADITLISG-----STLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CSEEEECC-----TTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 36666633 3668889999999999999999998763
No 220
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=46.60 E-value=78 Score=28.37 Aligned_cols=106 Identities=11% Similarity=-0.014 Sum_probs=53.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA 158 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (493)
.++|||+++... .| ..+..|..+.... ..+|.++.+.... . ..+. . ...+.+...+ ....
T Consensus 86 ~~~~ri~vl~Sg-------~g--~nl~~ll~~~~~g~l~~~i~~Visn~~~--a-~~~~-A----~~~gIp~~~~-~~~~ 147 (287)
T 3nrb_A 86 TDRKKVVIMVSK-------FD--HCLGDLLYRHRLGELDMEVVGIISNHPR--E-ALSV-S----LVGDIPFHYL-PVTP 147 (287)
T ss_dssp TCCCEEEEEECS-------CC--HHHHHHHHHHHHTSSCCEEEEEEESSCG--G-GCCC-C----CCTTSCEEEC-CCCG
T ss_pred CCCcEEEEEEeC-------CC--cCHHHHHHHHHCCCCCeEEEEEEeCChH--H-HHHH-H----HHcCCCEEEE-eccC
Confidence 457899998751 23 3456677766553 3577766655433 0 0111 0 1123332222 1111
Q ss_pred CccccccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 159 DKWRYSKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
......-..+.+.+++.+||+|++.++. ++..+....+.-++.+|.
T Consensus 148 --~~r~~~~~~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iNiHp 195 (287)
T 3nrb_A 148 --ATKAAQESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHH 195 (287)
T ss_dssp --GGHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred --cchhhHHHHHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEEECc
Confidence 1111112345666777899999987652 333333333335677775
No 221
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=46.56 E-value=81 Score=23.70 Aligned_cols=77 Identities=16% Similarity=0.131 Sum_probs=46.8
Q ss_pred HHHHHHHHHH--cCEEEeCCCCC-----CCCChHHHHHHH---cCCcEEecCCCCCc---cceeeeCcceEEECC-CHHH
Q 039338 372 PAELRAFYNA--IDIFVNPTLRP-----QGLDLTLMEAMM---SGKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVES 437 (493)
Q Consensus 372 ~~~~~~~~~~--adv~v~ps~~~-----eg~~~~~~EAm~---~G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~ 437 (493)
.++..+.+.. .|++++-..-+ +.-|..+++.+. .++|+|........ .+.+..|..+++..| +.++
T Consensus 36 ~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~ 115 (140)
T 2qr3_A 36 PVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVVKPWDNQK 115 (140)
T ss_dssp HHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEEESCCHHH
T ss_pred HHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheeeCCCCHHH
Confidence 3555565554 46666633222 334556666654 36777664221111 123445778999999 9999
Q ss_pred HHHHHHHHHHc
Q 039338 438 LHKTLEAAVSE 448 (493)
Q Consensus 438 l~~~i~~ll~~ 448 (493)
|.++|..++..
T Consensus 116 l~~~l~~~~~~ 126 (140)
T 2qr3_A 116 LLETLLNAASQ 126 (140)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999999876
No 222
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=46.47 E-value=22 Score=32.77 Aligned_cols=37 Identities=11% Similarity=-0.044 Sum_probs=26.3
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
+.|||++.. ..|+.+. .+++.|.++||+|+++.....
T Consensus 24 ~~~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 24 SPKTWLITG-------VAGFIGS---NLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp SCCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEECCSS
T ss_pred CCCeEEEEC-------CCcHHHH---HHHHHHHHCCCEEEEEeCCCC
Confidence 356777663 3355554 588899999999999886544
No 223
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=46.45 E-value=11 Score=33.72 Aligned_cols=33 Identities=12% Similarity=0.226 Sum_probs=24.3
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
+|||++.. ..|+.+. .+++.|.++||+|++++.
T Consensus 5 ~m~ilVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 5 KERVIITG-------ANGQLGK---QLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp CEEEEEES-------TTSHHHH---HHHHHSCTTTEEEEEECT
T ss_pred eeEEEEEC-------CCCHHHH---HHHHHHHhCCCEEEEecc
Confidence 46777664 3355554 488899999999999876
No 224
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=46.36 E-value=23 Score=32.38 Aligned_cols=36 Identities=14% Similarity=0.003 Sum_probs=25.1
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|+|++.. ..|+.+. .+++.|.++||+|.++.....
T Consensus 3 ~~~vlVtG-------atG~iG~---~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 3 GKRALITG-------IRGQDGA---YLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEECSCCS
T ss_pred CCEEEEEC-------CCChHHH---HHHHHHHHCCCEEEEEECCCc
Confidence 46666553 3466665 488899999999998875543
No 225
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=46.29 E-value=26 Score=27.34 Aligned_cols=35 Identities=9% Similarity=-0.002 Sum_probs=26.1
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
+.+|+++.. ++.-..+++.|.+.|++|+++.....
T Consensus 7 ~~~viIiG~-----------G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGY-----------GRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECC-----------SHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECc-----------CHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 456888742 33456788999999999999987644
No 226
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=46.26 E-value=23 Score=29.86 Aligned_cols=33 Identities=21% Similarity=0.440 Sum_probs=23.4
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|||+++. ..|.++ ..+++.|.+.|++|.++...
T Consensus 1 m~i~iiG-------a~G~~G---~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLG-------GTGNLG---KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEET-------TTSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEc-------CCCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 6888774 124444 45788899999999987653
No 227
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=46.03 E-value=23 Score=31.07 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=27.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.||.++|+. ..||.++ .+++.|.++|++|.++....
T Consensus 6 ~~k~vlVTG------as~gIG~---~~a~~l~~~G~~v~~~~~~~ 41 (264)
T 3i4f_A 6 FVRHALITA------GTKGLGK---QVTEKLLAKGYSVTVTYHSD 41 (264)
T ss_dssp CCCEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEESSC
T ss_pred ccCEEEEeC------CCchhHH---HHHHHHHHCCCEEEEEcCCC
Confidence 468888885 4567664 58999999999999876543
No 228
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=45.90 E-value=23 Score=31.96 Aligned_cols=34 Identities=26% Similarity=0.316 Sum_probs=24.9
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|||++.. ..|+.+ ..+++.|.++|++|.+++..
T Consensus 2 ~~~vlVtG-------atG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTG-------GTGFLG---QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CCEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC-------CCcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 36777663 335555 45889999999999999876
No 229
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=45.83 E-value=22 Score=32.54 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=24.7
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.|||+|+... . +.....++|.+.||+|..+.+..+.
T Consensus 4 mmrIvf~Gtp-----~------fa~~~L~~L~~~~~~v~~Vvt~pd~ 39 (317)
T 3rfo_A 4 MIKVVFMGTP-----D------FSVPVLRRLIEDGYDVIGVVTQPDR 39 (317)
T ss_dssp TSEEEEECCS-----T------THHHHHHHHHHTTCEEEEEECCCCC
T ss_pred ceEEEEEeCC-----H------HHHHHHHHHHHCCCcEEEEEeCCCc
Confidence 4899999761 1 2444567777789999877765443
No 230
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=45.73 E-value=20 Score=30.88 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=26.7
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC-CEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG-HRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~ 129 (493)
.||.++|+. ..||.++ .+++.|.++| ++|.++......
T Consensus 22 ~mk~vlVtG------atG~iG~---~l~~~L~~~G~~~V~~~~R~~~~ 60 (236)
T 3qvo_A 22 HMKNVLILG------AGGQIAR---HVINQLADKQTIKQTLFARQPAK 60 (236)
T ss_dssp CCEEEEEET------TTSHHHH---HHHHHHTTCTTEEEEEEESSGGG
T ss_pred cccEEEEEe------CCcHHHH---HHHHHHHhCCCceEEEEEcChhh
Confidence 356556653 4466665 4889999999 999998865443
No 231
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=45.68 E-value=95 Score=23.43 Aligned_cols=84 Identities=8% Similarity=0.016 Sum_probs=50.5
Q ss_pred cEEEecCCCHHHHHHHHHH--------cCEEEeCCCCCCCCChHHHHHHH-----cCCcEEecCCCCCc---cceeeeCc
Q 039338 363 QVLVMGSMSPAELRAFYNA--------IDIFVNPTLRPQGLDLTLMEAMM-----SGKPVMASRFPSIK---GTIVVDDE 426 (493)
Q Consensus 363 ~V~~~g~~~~~~~~~~~~~--------adv~v~ps~~~eg~~~~~~EAm~-----~G~PvI~s~~~~~~---~e~v~~~~ 426 (493)
.|..... .++....+.. .|++++-..-++.-|..+++.+. .++|+|........ .+....|.
T Consensus 35 ~v~~~~~--~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~ 112 (143)
T 2qvg_A 35 KIEIAKS--GNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFESLNI 112 (143)
T ss_dssp CEEEESS--HHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHTTTTC
T ss_pred eEEEECC--HHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcEEEEeCCCCHHHHHHHHhcCC
Confidence 4444433 3566666653 68887643222344667777775 45677664322212 12344577
Q ss_pred ceEEECC-CHHHHHHHHHHHHHc
Q 039338 427 FGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 427 ~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.+++..| +.++|.+++......
T Consensus 113 ~~~l~kP~~~~~L~~~~~~~~~~ 135 (143)
T 2qvg_A 113 RGHLIKPLDYGEAIKLFWILQSM 135 (143)
T ss_dssp CEEEESSCCHHHHHHHHHHHHHC
T ss_pred CeEEECCCCHHHHHHHHHHHHHh
Confidence 8999999 999999997765443
No 232
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=45.63 E-value=29 Score=29.92 Aligned_cols=43 Identities=14% Similarity=0.074 Sum_probs=31.8
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVD 128 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~ 128 (493)
++|||..|+.. ...-|-...+.+|+..|+++ |..|.++-.+..
T Consensus 2 ~~~~vI~v~s~----kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 2 NAKRVFGFVSA----KGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp -CCEEEEEEES----STTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCCeEEEEECC----CCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 45776666652 24456677788999999999 999999987655
No 233
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=45.63 E-value=20 Score=32.41 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=25.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|||++.. ..|+.+. .+++.|.++||+|++++....
T Consensus 7 ~~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITG-------GAGFIGG---HLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEET-------TTSHHHH---HHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEEC-------CCChHHH---HHHHHHHHCCCEEEEEecCCc
Confidence 46676663 3355554 588999999999999876544
No 234
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=45.44 E-value=19 Score=31.88 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=28.3
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.||.++||. ..||.++. +++.|.++|++|.++......
T Consensus 2 ~~k~vlVTG------asg~IG~~---la~~L~~~G~~V~~~~r~~~~ 39 (267)
T 3rft_A 2 AMKRLLVTG------AAGQLGRV---MRERLAPMAEILRLADLSPLD 39 (267)
T ss_dssp CEEEEEEES------TTSHHHHH---HHHHTGGGEEEEEEEESSCCC
T ss_pred CCCEEEEEC------CCCHHHHH---HHHHHHhcCCEEEEEecCCcc
Confidence 367777774 45777755 889999999999988766544
No 235
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=45.38 E-value=83 Score=28.21 Aligned_cols=106 Identities=8% Similarity=-0.004 Sum_probs=53.2
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCC-CCCCCCCCccccCCCCCCCCCCceEeecC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPV-DNINSPSISHQENDDGSNNKYPLLHFHEG 156 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (493)
..+++||+++... +| ..+..|..+.... ..+|.++.+.. ... .. .. ...+.+...+...
T Consensus 86 ~~~~~ri~vl~Sg-------~g--~nl~~ll~~~~~g~l~~~i~~Visn~p~~~-~~-~A-------~~~gIp~~~~~~~ 147 (288)
T 3obi_A 86 RETRRKVMLLVSQ-------SD--HCLADILYRWRVGDLHMIPTAIVSNHPRET-FS-GF-------DFGDIPFYHFPVN 147 (288)
T ss_dssp TTSCEEEEEEECS-------CC--HHHHHHHHHHHTTSSCEEEEEEEESSCGGG-SC-CT-------TTTTCCEEECCCC
T ss_pred cCCCcEEEEEEcC-------CC--CCHHHHHHHHHCCCCCeEEEEEEcCCChhH-HH-HH-------HHcCCCEEEeCCC
Confidence 3457899988741 23 3466677766543 24776666554 331 11 10 1123332222111
Q ss_pred CCCccccccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 157 EADKWRYSKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
. ......-..+.+.+++.++|+|++.++. ++..+....+.-++.+|.
T Consensus 148 ~---~~r~~~~~~~~~~l~~~~~Dlivlagy~~il~~~~l~~~~~~~iNiHp 196 (288)
T 3obi_A 148 K---DTRRQQEAAITALIAQTHTDLVVLARYMQILSDEMSARLAGRCINIHH 196 (288)
T ss_dssp T---TTHHHHHHHHHHHHHHHTCCEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred c---ccHHHHHHHHHHHHHhcCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCc
Confidence 1 1111112355666677899999987652 333333333335677775
No 236
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=45.36 E-value=26 Score=30.90 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=24.7
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 8 k~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTG------AAQGIGRA---FAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEET------TTSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCCcHHHH---HHHHHHHCCCEEEEEECC
Confidence 5667764 45776654 889999999999887654
No 237
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=45.36 E-value=36 Score=25.06 Aligned_cols=34 Identities=15% Similarity=0.236 Sum_probs=24.2
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC-CEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG-HRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 127 (493)
.|||+++. . |+++. .+++.|.+.| ++|.++....
T Consensus 5 ~~~v~I~G-------~-G~iG~---~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVG-------A-GKIGQ---MIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEEC-------C-SHHHH---HHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEEC-------C-CHHHH---HHHHHHHhCCCceEEEEeCCH
Confidence 46788773 3 66554 4788888999 9988877543
No 238
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=45.32 E-value=88 Score=22.90 Aligned_cols=75 Identities=9% Similarity=0.097 Sum_probs=44.4
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc--CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS--GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEA 444 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~--G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ 444 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. +.|+|........+ +....|..+++..| +.+++..++.+
T Consensus 36 ~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~ 115 (120)
T 3f6p_A 36 NEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKA 115 (120)
T ss_dssp HHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSCHHHHHHHHHTTCCEEEEESCCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCChHHHHHHHhCCcceeEcCCCCHHHHHHHHHH
Confidence 344444433 477666332234445666666543 56776542222111 23456788999999 99999999988
Q ss_pred HHH
Q 039338 445 AVS 447 (493)
Q Consensus 445 ll~ 447 (493)
++.
T Consensus 116 ~l~ 118 (120)
T 3f6p_A 116 NLR 118 (120)
T ss_dssp HHT
T ss_pred HHh
Confidence 765
No 239
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=45.12 E-value=16 Score=33.48 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=26.8
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
+|||+++.. | ....+++++.+.|++|.++....
T Consensus 2 ~m~Ililg~---------g---~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYAS---------H---SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESS---------T---THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECC---------h---hHHHHHHHHHhCCCEEEEEECCC
Confidence 689999974 2 45678999999999999988654
No 240
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=45.10 E-value=1.5e+02 Score=25.65 Aligned_cols=106 Identities=11% Similarity=0.097 Sum_probs=62.6
Q ss_pred CCeEEEEEeCCCcHH-----HHhhhcCcEEEecCCCHHHHHHHHHH---cCEEEeCCCCCCCCChHHHHHHHc-----CC
Q 039338 341 PDVYLIVAGSGPWEQ-----RYKDFGHQVLVMGSMSPAELRAFYNA---IDIFVNPTLRPQGLDLTLMEAMMS-----GK 407 (493)
Q Consensus 341 ~~~~l~i~G~g~~~~-----~~~~l~~~V~~~g~~~~~~~~~~~~~---adv~v~ps~~~eg~~~~~~EAm~~-----G~ 407 (493)
...++.++-+.+... .++..+..|... -+.++..+.+.. .|++++--.-++.-|..+++.+.. .+
T Consensus 123 ~~~~ILivDD~~~~~~~l~~~L~~~~~~v~~a--~~~~eal~~l~~~~~~dlvllD~~mP~~dG~~l~~~lr~~~~~~~~ 200 (259)
T 3luf_A 123 QQIEVLVVDDSRTSRHRTMAQLRKQLLQVHEA--SHAREALATLEQHPAIRLVLVDYYMPEIDGISLVRMLRERYSKQQL 200 (259)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHTTTCEEEEE--SSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHHHCCTTTS
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHcCcEEEEe--CCHHHHHHHHhcCCCCCEEEEcCCCCCCCHHHHHHHHHhccCCCCC
Confidence 356778877654321 122222333322 344666666654 367776432234456777777653 46
Q ss_pred cEEec-CCCCCc--cceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 408 PVMAS-RFPSIK--GTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 408 PvI~s-~~~~~~--~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
|||+. ...... .+.+..|..+++..| +.++|...+.+++..
T Consensus 201 ~ii~~s~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~l~~ 245 (259)
T 3luf_A 201 AIIGISVSDKRGLSARYLKQGANDFLNQPFEPEELQCRVSHNLEA 245 (259)
T ss_dssp EEEEEECSSSSSHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred eEEEEEccCCHHHHHHHHhcChhheEcCCCCHHHHHHHHHHHHHh
Confidence 77743 222211 123456889999999 999999999988765
No 241
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=45.08 E-value=22 Score=32.22 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=24.1
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|||+++.. |.++. .++..|.+.||+|+++...
T Consensus 3 ~m~i~iiG~--------G~~G~---~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGA--------GAMGS---RLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECC--------SHHHH---HHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECc--------CHHHH---HHHHHHHhCCCcEEEEECC
Confidence 489999853 44443 4778889999999988653
No 242
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=45.03 E-value=33 Score=30.80 Aligned_cols=39 Identities=21% Similarity=0.075 Sum_probs=27.4
Q ss_pred ceEEEEEeccCCCCCCCCchHH---HHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMER---HAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~---~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
+|||+++.... ....+. ....+++++.+.||+|.++...
T Consensus 2 ~~~i~il~gg~-----s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGT-----SAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCS-----STTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCC-----CccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 58999997521 111122 3467999999999999998765
No 243
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=44.98 E-value=1.4e+02 Score=25.06 Aligned_cols=76 Identities=16% Similarity=0.070 Sum_probs=47.6
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++....+.. .|++++-..-++.-|..+++.+. .++|||........ .+.+..|..|++..| +.++|..+|.
T Consensus 41 ~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~ 120 (233)
T 1ys7_A 41 AEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120 (233)
T ss_dssp HHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHH
Confidence 444444443 57777643223445667777765 36787764221111 134556778999999 9999999999
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
.++..
T Consensus 121 ~~~~~ 125 (233)
T 1ys7_A 121 ALLRR 125 (233)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88753
No 244
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=44.56 E-value=34 Score=30.05 Aligned_cols=41 Identities=20% Similarity=0.159 Sum_probs=32.9
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
.+.||.++|+.. ...-|=...+..|+++|+++|+.|..+=+
T Consensus 23 ~~~m~~i~Itgt----~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 23 QSHMTILVVTGT----GTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp CSSCEEEEEEES----STTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCCEEEEEeC----CCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 356898998873 35567788889999999999999988743
No 245
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=44.45 E-value=37 Score=28.03 Aligned_cols=41 Identities=5% Similarity=0.050 Sum_probs=27.5
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC------CCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR------GHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~------G~~V~v~~~~~ 127 (493)
|||++|..+- . ..|-....+..+++.+.+. |++|.++....
T Consensus 1 Mkilii~gS~-r--~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~ 47 (191)
T 1t0i_A 1 MKVGIIMGSV-R--AKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQ 47 (191)
T ss_dssp CEEEEEECCC-C--SSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHH
T ss_pred CeEEEEeCCC-C--CCCchHHHHHHHHHHHHHhhccCCCCceEEEEehhh
Confidence 8999998752 1 2234455555667777776 79999987654
No 246
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=44.30 E-value=23 Score=32.86 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=24.5
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+.|||+++.. |.++. .++..|.+.||+|+++...
T Consensus 2 m~~mki~iiG~--------G~~G~---~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGL--------GNGGH---AFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECC--------SHHHH---HHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECC--------CHHHH---HHHHHHHhCCCEEEEEeCC
Confidence 34589999953 55454 3677888999999888543
No 247
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=44.24 E-value=63 Score=24.17 Aligned_cols=43 Identities=14% Similarity=0.066 Sum_probs=29.1
Q ss_pred CCceEEEEEeccCCCCCCCCchHH-HHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMER-HAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~-~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.+.+||++++.. . -|.+. ....+-+.+.+.|.++.+-......
T Consensus 19 ~~~kkIlvvC~s-----G-~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~ 62 (113)
T 1tvm_A 19 GSKRKIIVACGG-----A-VATSTMAAEEIKELCQSHNIPVELIQCRVNE 62 (113)
T ss_dssp CSSEEEEEESCS-----C-SSHHHHHHHHHHHHHHHTTCCEEEEEECTTT
T ss_pred ccccEEEEECCC-----C-HHHHHHHHHHHHHHHHHcCCeEEEEEecHHH
Confidence 345789999962 3 34444 4678888999999987666544433
No 248
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=44.20 E-value=89 Score=23.61 Aligned_cols=66 Identities=15% Similarity=0.187 Sum_probs=39.6
Q ss_pred cCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-. -++.-|..+++.+. .++|+|........+ +....|..+++..| +.++|..+|..++..
T Consensus 49 ~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 121 (142)
T 2qxy_A 49 IDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYILKPFRLDYLLERVKKIISS 121 (142)
T ss_dssp CSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEESSCCHHHHHHHHHHHHHC
T ss_pred CCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEeCCCCHHHHHHHHHHHHhh
Confidence 46666533 22223444555443 256776543222111 23445778899999 999999999999876
No 249
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=44.13 E-value=37 Score=27.69 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=31.7
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
++|+++.++. + ...|-.+.+..|+..|.++|+.|.++.....
T Consensus 2 ~~~~~i~i~G-~----sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~~ 43 (169)
T 1xjc_A 2 NAMNVWQVVG-Y----KHSGKTTLMEKWVAAAVREGWRVGTVKHHGH 43 (169)
T ss_dssp --CCEEEEEC-C----TTSSHHHHHHHHHHHHHHTTCCEEEEECCC-
T ss_pred CCCEEEEEEC-C----CCCCHHHHHHHHHHhhHhcCCeeeEEEeCCC
Confidence 3577777775 1 5568888899999999999999999886654
No 250
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=44.08 E-value=10 Score=31.86 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=24.3
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEE-EEecC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVH-IFTSP 126 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~-v~~~~ 126 (493)
++|||++|..+ +..++....+.+.+..+.+.|++|. ++...
T Consensus 3 ~~mkil~I~GS----~r~~s~t~~l~~~~~~~~~~g~~v~~~idL~ 44 (193)
T 3svl_A 3 EKLQVVTLLGS----LRKGSFNGMVARTLPKIAPASMEVNALPSIA 44 (193)
T ss_dssp -CEEEEEEECC----CSTTCHHHHHHHHGGGTSCTTEEEEECCCST
T ss_pred CCCEEEEEEcc----CCCCCHHHHHHHHHHHHccCCCEEEEEEeHH
Confidence 46999999985 2456655544433333334588888 54443
No 251
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=43.89 E-value=45 Score=29.62 Aligned_cols=42 Identities=12% Similarity=0.047 Sum_probs=29.4
Q ss_pred eEEEEEeccCCCCCCCCchHH-HHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMER-HAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~-~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|||++|..+ | ..+|... .+..+++.|.+.|++|.++......
T Consensus 3 mkiLiI~gS-p---r~~s~t~~la~~~~~~l~~~g~eV~~~dL~~~~ 45 (273)
T 1d4a_A 3 RRALIVLAH-S---ERTSFNYAMKEAAAAALKKKGWEVVESDLYAMN 45 (273)
T ss_dssp CEEEEEECC-S---CTTSHHHHHHHHHHHHHHHTTCEEEEEETTTTT
T ss_pred CEEEEEEeC-C---CCccHHHHHHHHHHHHHHhCCCeEEEEEccccC
Confidence 799999875 2 3345444 3445677788889999998876544
No 252
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=43.86 E-value=45 Score=26.45 Aligned_cols=38 Identities=18% Similarity=0.113 Sum_probs=28.1
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|..|||++=+++ +|.+ .=..+.+.|.++||+|.=+.+.
T Consensus 5 m~~mkI~igsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~~ 42 (148)
T 4em8_A 5 MVVKRVFLSSDH-------AGVE-LRLFLSAYLRDLGCEVFDCGCD 42 (148)
T ss_dssp CSCSEEEEEECG-------GGHH-HHHHHHHHHHHTTCEEEECCCC
T ss_pred ceeeEEEEEECc-------hhHH-HHHHHHHHHHHCCCEEEEeCCC
Confidence 445899888763 5655 3567889999999999877653
No 253
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=43.83 E-value=18 Score=33.38 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=25.4
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
..|||++|.. |.++.. ++..|++.|++|+++..
T Consensus 2 ~~mkI~IiGa--------G~~G~~---~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 2 SLTRICIVGA--------GAVGGY---LGARLALAGEAINVLAR 34 (335)
T ss_dssp CCCCEEEESC--------CHHHHH---HHHHHHHTTCCEEEECC
T ss_pred CCCEEEEECc--------CHHHHH---HHHHHHHCCCEEEEEEC
Confidence 3589999954 555543 77888899999999875
No 254
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=43.69 E-value=28 Score=31.05 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=24.6
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||+++.. |.++. .++..|.+.||+|+++....
T Consensus 1 m~i~iiG~--------G~~G~---~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGC--------GALGQ---LWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECC--------SHHHH---HHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECc--------CHHHH---HHHHHHHhCCCCEEEEEcCc
Confidence 78888853 44443 57888999999999986544
No 255
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=43.66 E-value=1.6e+02 Score=25.59 Aligned_cols=39 Identities=8% Similarity=-0.026 Sum_probs=28.1
Q ss_pred CceEEEEEecc-----CCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338 82 FTLKIAVFSRK-----WPISTTPGGMERHAHTLHVALARRGHRVHIFT 124 (493)
Q Consensus 82 ~~mkIl~v~~~-----~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 124 (493)
+..+|+++.+. . ...-.......+.+++.+.|+++.++.
T Consensus 7 ~~~~Igvi~~~~~~~~~----~~~~~~~~~~gi~~~a~~~g~~~~~~~ 50 (292)
T 3k4h_A 7 TTKTLGLVMPSSASKAF----QNPFFPEVIRGISSFAHVEGYALYMST 50 (292)
T ss_dssp CCCEEEEECSSCHHHHT----TSTHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEecCCccccc----cCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 34579999875 3 334456667778888899999988754
No 256
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=43.63 E-value=1.5e+02 Score=25.12 Aligned_cols=145 Identities=12% Similarity=0.068 Sum_probs=87.5
Q ss_pred EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHh-hhc--CcEEEecCCCHHHHHHHHHHcCEEEeC
Q 039338 312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYK-DFG--HQVLVMGSMSPAELRAFYNAIDIFVNP 388 (493)
Q Consensus 312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~-~l~--~~V~~~g~~~~~~~~~~~~~adv~v~p 388 (493)
.-++|-|.+.....-.-+++- |-+. .+.+-+.|.....+.-. +.. ..-.|.|.++-.++.+-=+.|-..+.-
T Consensus 182 ~d~iyggsfrsg~re~kmve~---lfdt--gl~ieffg~~~~~qfknp~~pwt~~pvf~gki~~~~~~~~ns~a~a~~i~ 256 (351)
T 1jg7_A 182 LDVIYGGSFRSGQRESKMVEF---LFDT--GLNIEFFGNAREKQFKNPKYPWTKAPVFTGKIPMNMVSEKNSQAIAALII 256 (351)
T ss_dssp EEEEEECCCGGGTTHHHHHHH---HSSC--SSCEEEESSCCGGGCCCTTSCCSSCCEEEECCCGGGHHHHHTTEEEEEEC
T ss_pred eeeeeccccccCchHHHHHHH---HHhc--CcceeeecchhHHhccCCCCCCcCCCccCCcCCHHHHhhccccceEEEEe
Confidence 567799998765554444443 3333 34455678654332111 111 345799999988888877766665553
Q ss_pred CC--CCCC-CChHHHHHHHcCCcEEecC-CCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Q 039338 389 TL--RPQG-LDLTLMEAMMSGKPVMASR-FPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYA 464 (493)
Q Consensus 389 s~--~~eg-~~~~~~EAm~~G~PvI~s~-~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 464 (493)
.- +..+ .-..+-|+||+....+.-. ...-. .++.+ .-+.+. +-.+|.+.+.++-.+ ...+.++-+-..+..
T Consensus 257 gdk~y~~n~it~rvwe~~as~av~~~d~~fd~~~-~i~~~--a~fyv~-nr~elid~in~~k~~-~~~r~e~l~~qh~il 331 (351)
T 1jg7_A 257 GDKNYNDNFITLRVWETMASDAVMLIDEEFDTKH-RIIND--ARFYVN-NRAELIDRVNELKHS-DVLRKEMLSIQHDIL 331 (351)
T ss_dssp CCGGGTTTCCCHHHHHHHTSSSEEEEEGGGCTTC-CSCSC--GGGEEC-SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
T ss_pred ccccccCCeecHHHHHHHhhhhHhhhhcccCccc-ccccC--ceeEec-CHHHHHHHHhhccch-HHHHHHHHHHHHHHH
Confidence 31 1122 3567899999877655432 22222 33333 335665 889999999999877 777777766655555
Q ss_pred HH
Q 039338 465 AS 466 (493)
Q Consensus 465 ~~ 466 (493)
.+
T Consensus 332 ~k 333 (351)
T 1jg7_A 332 NK 333 (351)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 257
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=43.59 E-value=34 Score=26.60 Aligned_cols=66 Identities=15% Similarity=0.246 Sum_probs=44.3
Q ss_pred cCEEEeCCCCCCCCChHHHHHHH-----cCCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHH
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMM-----SGKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVS 447 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~-----~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~ 447 (493)
-|++++--.=++.-|..+++.+. ..+|||..-..+..+ +....|..+++..| ++++|.++|.++++
T Consensus 58 ~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 58 FDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 57777633223445778888875 457887643222221 23456788999999 99999999988763
No 258
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=43.49 E-value=59 Score=29.67 Aligned_cols=33 Identities=12% Similarity=0.083 Sum_probs=20.2
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFT 124 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 124 (493)
..|||++.. ..|+.+. .+++.|.++|+++.|+.
T Consensus 23 ~~~~vlVtG-------atG~iG~---~l~~~L~~~g~~~~v~~ 55 (346)
T 4egb_A 23 NAMNILVTG-------GAGFIGS---NFVHYMLQSYETYKIIN 55 (346)
T ss_dssp -CEEEEEET-------TTSHHHH---HHHHHHHHHCTTEEEEE
T ss_pred CCCeEEEEC-------CccHHHH---HHHHHHHhhCCCcEEEE
Confidence 346776653 3355554 58889999994444444
No 259
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=43.40 E-value=1e+02 Score=23.23 Aligned_cols=76 Identities=9% Similarity=0.143 Sum_probs=47.5
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc---CCcEEe-cCCCCCccceeeeCcceEEECC-CHHHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMA-SRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAA 445 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~-s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~l 445 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. ..|||. +.......+.+..+..+++..| +.++|..+|.++
T Consensus 45 ~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 124 (143)
T 2qv0_A 45 LDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRIINMLQKL 124 (143)
T ss_dssp HHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCTTHHHHHHTTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCCHHHHHHHHhCCcceEEeCCCCHHHHHHHHHHH
Confidence 455555543 578776432234446677777754 344543 3332222234556778999999 999999999998
Q ss_pred HHc
Q 039338 446 VSE 448 (493)
Q Consensus 446 l~~ 448 (493)
+..
T Consensus 125 ~~~ 127 (143)
T 2qv0_A 125 TTA 127 (143)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 260
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=43.36 E-value=29 Score=31.69 Aligned_cols=39 Identities=23% Similarity=0.188 Sum_probs=25.3
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
+...|||++.. ..|+.+. .+++.|.++||+|+++.....
T Consensus 11 ~~~~~~vlVTG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~~ 49 (335)
T 1rpn_A 11 GSMTRSALVTG-------ITGQDGA---YLAKLLLEKGYRVHGLVARRS 49 (335)
T ss_dssp ----CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEECCCS
T ss_pred cccCCeEEEEC-------CCChHHH---HHHHHHHHCCCeEEEEeCCCc
Confidence 33457777663 3466554 488899999999999876543
No 261
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=43.14 E-value=28 Score=30.58 Aligned_cols=35 Identities=14% Similarity=0.180 Sum_probs=25.8
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHh-CCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALAR-RGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~ 126 (493)
++|.++|+. ..||.+. .+++.|.+ +|++|.++...
T Consensus 3 ~~k~vlITG------asggIG~---~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTG------GNKGIGL---AIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCCEEEESS------CSSHHHH---HHHHHHHHHSSSEEEEEESS
T ss_pred CCCEEEEeC------CCcHHHH---HHHHHHHHhcCCeEEEEeCC
Confidence 456777774 4577665 48889999 99999888754
No 262
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=43.12 E-value=28 Score=29.53 Aligned_cols=36 Identities=8% Similarity=0.175 Sum_probs=25.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHH-hCCCEEEEEecCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALA-RRGHRVHIFTSPVD 128 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~-~~G~~V~v~~~~~~ 128 (493)
||.++|+. ..||.++ .+++.|. +.|++|.++.....
T Consensus 5 mk~vlVtG------asg~iG~---~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 5 YXYITILG------AAGQIAQ---XLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp CSEEEEES------TTSHHHH---HHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEEEe------CCcHHHH---HHHHHHHhcCCceEEEEecCcc
Confidence 67555553 4466665 4788888 89999999876543
No 263
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=42.96 E-value=27 Score=31.09 Aligned_cols=37 Identities=19% Similarity=0.118 Sum_probs=25.7
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|.+.|+++|+. ..||.++. +++.|+++|++|.++...
T Consensus 21 m~~~k~~lVTG------as~GIG~a---ia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTG------VSSGIGLA---VARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEES------TTSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeC------CCCHHHHH---HHHHHHHCCCEEEEEeCC
Confidence 33457888885 55777654 889999999999887654
No 264
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=42.92 E-value=54 Score=28.59 Aligned_cols=44 Identities=7% Similarity=0.054 Sum_probs=29.5
Q ss_pred eEEEEEeccCC----CCCCCCchH-HHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWP----ISTTPGGME-RHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p----~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
+|||+|..... ......|.+ .-+..-...|.+.|++|+++++..
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 47999887531 011223333 446677889999999999999764
No 265
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=42.71 E-value=35 Score=28.50 Aligned_cols=41 Identities=17% Similarity=0.344 Sum_probs=26.7
Q ss_pred eEEEEEeccCCCCCCCCchHH-HHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMER-HAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~-~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|||++|..+ | ..++... .+..+++.+ +.|++|.++......
T Consensus 1 MkiLiI~gs-p---r~~s~t~~l~~~~~~~~-~~g~~v~~~dL~~~~ 42 (196)
T 3lcm_A 1 MKILIVYTH-P---NPTSFNAEILKQVQTNL-SKEHTVSTLDLYAEH 42 (196)
T ss_dssp CEEEEEECC-S---CTTSHHHHHHHHHHHHS-CTTSEEEEEETTTTT
T ss_pred CEEEEEEeC-C---CCCChHHHHHHHHHHHh-cCCCeEEEEEcccCC
Confidence 899999985 2 3344333 333445555 679999999876544
No 266
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=42.54 E-value=1.1e+02 Score=23.22 Aligned_cols=76 Identities=7% Similarity=0.102 Sum_probs=43.9
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCC-CC--CccceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRF-PS--IKGTIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~-~~--~~~e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++....+.. .|++++-..-++.-|..+++.+. .+.|+|.... .. ...+.+..|..+++..| +.++|.++|.
T Consensus 39 ~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~ 118 (141)
T 3cu5_A 39 INAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALK 118 (141)
T ss_dssp HHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHHHHHHH
Confidence 444444433 57877633222334666777664 3677765422 21 11134566788999999 9999999999
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
+++..
T Consensus 119 ~~~~~ 123 (141)
T 3cu5_A 119 QSIQT 123 (141)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 267
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=42.25 E-value=1.1e+02 Score=22.99 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=46.2
Q ss_pred HHHHHHHH--HcCEEEeCCCCC-CCCChHHHHHHH--cCCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYN--AIDIFVNPTLRP-QGLDLTLMEAMM--SGKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~--~adv~v~ps~~~-eg~~~~~~EAm~--~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++....+. ..|++++-..-+ +.-|..+++.+. .++|+|........+ +....+..+++..| +.++|..+|.
T Consensus 44 ~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~ 123 (140)
T 3cg0_A 44 EEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQDVETFQRAKRVNPFGYLAKPVAADTLHRSIE 123 (140)
T ss_dssp HHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCCHHHHHHHHTTCCSEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHhcCCCEEEeCCCCHHHHHHHHH
Confidence 44444443 357777643222 234556666654 478887643222221 23445778899999 9999999999
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
.++..
T Consensus 124 ~~~~~ 128 (140)
T 3cg0_A 124 MAIHK 128 (140)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 98765
No 268
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=42.14 E-value=41 Score=30.18 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=24.2
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|.++|+. ..||.+. .+++.|.++|++|.++...
T Consensus 19 k~vlVTG------asggIG~---~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 19 QVAIVTG------GATGIGK---AIVKELLELGSNVVIASRK 51 (303)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4566664 4477665 4889999999999888654
No 269
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=42.08 E-value=19 Score=32.66 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=23.0
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFT 124 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 124 (493)
..|||++.. ..|+.+. .+++.|.++||+|+++.
T Consensus 2 ~~~~ilVtG-------atG~iG~---~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 2 AKQRVFIAG-------HRGMVGS---AIRRQLEQRGDVELVLR 34 (321)
T ss_dssp CCEEEEEET-------TTSHHHH---HHHHHHTTCTTEEEECC
T ss_pred CCCEEEEEC-------CCcHHHH---HHHHHHHhCCCeEEEEe
Confidence 347877663 3355554 48889999999988754
No 270
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=42.02 E-value=76 Score=29.10 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=25.4
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC-----CEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRG-----HRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-----~~V~v~~~~~~~ 129 (493)
|||++.. ..|+.+ ..+++.|.++| |+|+++......
T Consensus 2 ~~vlVtG-------atG~iG---~~l~~~L~~~g~~~~~~~V~~~~r~~~~ 42 (364)
T 2v6g_A 2 SVALIVG-------VTGIIG---NSLAEILPLADTPGGPWKVYGVARRTRP 42 (364)
T ss_dssp EEEEEET-------TTSHHH---HHHHHHTTSTTCTTCSEEEEEEESSCCC
T ss_pred CEEEEEC-------CCcHHH---HHHHHHHHhCCCCCCceEEEEEeCCCCc
Confidence 6776663 335555 45888999999 999998866544
No 271
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=41.95 E-value=32 Score=31.56 Aligned_cols=36 Identities=19% Similarity=0.179 Sum_probs=24.5
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
+.|||++.. ..|+.+. .+++.|.++|++|.++....
T Consensus 26 ~~~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 26 DRKRILITG-------GAGFVGS---HLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp -CCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEECCS
T ss_pred CCCEEEEEc-------CccHHHH---HHHHHHHHCCCEEEEEeCCC
Confidence 346666553 3355554 58889999999999987543
No 272
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=41.92 E-value=26 Score=32.64 Aligned_cols=39 Identities=13% Similarity=0.119 Sum_probs=25.7
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~ 129 (493)
++.|||++.. ..|+.+. .+++.|.++ ||+|+++......
T Consensus 22 m~~~~vlVtG-------atG~iG~---~l~~~L~~~~g~~V~~~~r~~~~ 61 (372)
T 3slg_A 22 MKAKKVLILG-------VNGFIGH---HLSKRILETTDWEVFGMDMQTDR 61 (372)
T ss_dssp -CCCEEEEES-------CSSHHHH---HHHHHHHHHSSCEEEEEESCCTT
T ss_pred cCCCEEEEEC-------CCChHHH---HHHHHHHhCCCCEEEEEeCChhh
Confidence 3345666653 3355554 588888888 9999999865433
No 273
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=41.91 E-value=39 Score=27.49 Aligned_cols=39 Identities=26% Similarity=0.300 Sum_probs=27.2
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
-..+|||++-++. +|.+ .-..+.+.|.++||+|.=+.+.
T Consensus 17 ~~~~MkIaIgsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~~ 55 (169)
T 3ph3_A 17 RGSHMKIGIGSDH-------GGYN-LKREIADFLKKRGYEVIDFGTH 55 (169)
T ss_dssp ----CEEEEEECG-------GGHH-HHHHHHHHHHHTTCEEEECCCC
T ss_pred cCCCCEEEEEeCc-------hHHH-HHHHHHHHHHHCCCEEEEcCCC
Confidence 3457999998863 5655 3567889999999999876654
No 274
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=41.85 E-value=45 Score=27.83 Aligned_cols=36 Identities=22% Similarity=0.137 Sum_probs=26.6
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
||++... ...| ......+++.|.+.|++|+++.+..
T Consensus 3 ~IllgvT------Gs~a-a~k~~~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 3 KIALCIT------GASG-VIYGIKLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp EEEEEEC------SSTT-HHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred EEEEEEE------CHHH-HHHHHHHHHHHHHCCCEEEEEEChh
Confidence 6766654 2223 4468899999999999999997654
No 275
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=41.84 E-value=37 Score=29.46 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=29.6
Q ss_pred eEEEEEeccCCCCCCC-CchHHHHHHHHHHHHhC-CCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTP-GGMERHAHTLHVALARR-GHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~-gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~ 129 (493)
|||++|..+ | .. |-....+..+++.+.+. |++|.++......
T Consensus 2 mkIliI~gS-~---r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~~~~ 45 (242)
T 1sqs_A 2 NKIFIYAGV-R---NHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSE 45 (242)
T ss_dssp CEEEEEECC-C---CTTCHHHHHHHHHHHHHHHHSCCEEEEECTTTCC
T ss_pred CeEEEEECC-C---CCCChHHHHHHHHHHHHHHhcCCeEEEEEcccCC
Confidence 699999874 1 33 44455566678888887 9999998765443
No 276
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=41.53 E-value=28 Score=32.07 Aligned_cols=36 Identities=14% Similarity=0.314 Sum_probs=25.5
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
...+|||+||.. |.++. .++..|.+.||+|+++...
T Consensus 11 ~~~~~kI~iIG~--------G~mG~---ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 11 HHMEMRFFVLGA--------GSWGT---VFAQMLHENGEEVILWARR 46 (335)
T ss_dssp ---CCEEEEECC--------SHHHH---HHHHHHHHTTCEEEEECSS
T ss_pred cccCCcEEEECc--------CHHHH---HHHHHHHhCCCeEEEEeCC
Confidence 345799999954 54443 4788889999999988654
No 277
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=41.51 E-value=71 Score=25.91 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=43.3
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+.. .+|||..-..... .+.+..|..+++..| +.++|..+|..++..
T Consensus 52 ~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~~~~~~ 125 (184)
T 3rqi_A 52 FEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYASIATAVQAVKDGADNYLAKPANVESILAALQTNASE 125 (184)
T ss_dssp CSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHTSTTHHH
T ss_pred CCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHHHHHHH
Confidence 477766332234456777776654 6677664322221 124456788999999 999999999887764
No 278
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=41.33 E-value=17 Score=33.98 Aligned_cols=46 Identities=11% Similarity=0.032 Sum_probs=31.3
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
|++|||+++.... +....-.-.....++++|.+.||+|+.+.....
T Consensus 1 m~~~~v~vl~GG~--S~E~evSl~S~~~v~~al~~~~~~v~~i~i~~~ 46 (364)
T 3i12_A 1 MAKLRVGIVFGGK--SAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKA 46 (364)
T ss_dssp -CCEEEEEEEECS--STTHHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred CCccEEEEEeccC--CCCccchHHHHHHHHHHHhhcCCeEEEEEECCC
Confidence 4689999998742 112222224456789999999999999986544
No 279
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=41.15 E-value=17 Score=34.38 Aligned_cols=47 Identities=11% Similarity=-0.026 Sum_probs=31.7
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|++|||+++.... ..+..-.-.....++++|.+.||+|+.+.....
T Consensus 34 ~m~~~~v~vl~GG~--S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~ 80 (383)
T 3k3p_A 34 SMSKETLVLLYGGR--SAERDVSVLSAESVMRAINYDNFLVKTYFITQA 80 (383)
T ss_dssp ---CEEEEEEEECS--STTHHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred cccCCeEEEEeCCC--CCcchHHHHHHHHHHHHhhhcCCEEEEEEecCC
Confidence 46788999998643 122222235677889999999999999987644
No 280
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=41.12 E-value=68 Score=26.01 Aligned_cols=45 Identities=18% Similarity=0.285 Sum_probs=28.8
Q ss_pred CCceEEEEEeccCCCCCCCCch-HHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGM-ERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.++||+++++.. .+.|-. ......|+..|.+.|++|.-...-.++
T Consensus 11 ~~~~rv~Ii~tG----dElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd 56 (169)
T 1y5e_A 11 PKEVRCKIVTIS----DTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDD 56 (169)
T ss_dssp -CCCEEEEEEEC----SSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSS
T ss_pred ccCCEEEEEEEc----CccCeeccChHHHHHHHHHHCCCeEeEEEEeCCC
Confidence 457899998873 233222 234456888888999998776554433
No 281
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=41.08 E-value=83 Score=25.85 Aligned_cols=42 Identities=14% Similarity=0.220 Sum_probs=31.7
Q ss_pred eEEEEE-ec-cCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 84 LKIAVF-SR-KWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 84 mkIl~v-~~-~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
.++++| .. .|+......|...=+..|.+.|.+.|++|.+...
T Consensus 43 ~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~V~~~~d 86 (178)
T 2h54_A 43 TRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKN 86 (178)
T ss_dssp CCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCEEEEecC
Confidence 444444 43 4654456778999999999999999999998764
No 282
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=41.03 E-value=14 Score=31.05 Aligned_cols=39 Identities=10% Similarity=0.062 Sum_probs=28.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||++|..+ | ..++ +.....+++.+.+.|++|.++....
T Consensus 2 mkiLiI~gs-p---~~~~-s~l~~~l~~~~~~~g~ev~~~dL~~ 40 (192)
T 3f2v_A 2 PKTLIILAH-P---NISQ-STVHKHWSDAVRQHTDRFTVHELYA 40 (192)
T ss_dssp CCEEEEECC-T---TGGG-CSHHHHHHHHHTTCTTTEEEEEHHH
T ss_pred CEEEEEEeC-C---CccH-HHHHHHHHHHHHhCCCeEEEEEchh
Confidence 689999874 2 2222 3567788888888899999987654
No 283
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.82 E-value=40 Score=28.96 Aligned_cols=35 Identities=9% Similarity=0.105 Sum_probs=25.5
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
|+++|+. ..||.++ .+++.|.++|++|.++.....
T Consensus 4 k~vlITG------as~gIG~---~~a~~l~~~G~~V~~~~r~~~ 38 (236)
T 1ooe_A 4 GKVIVYG------GKGALGS---AILEFFKKNGYTVLNIDLSAN 38 (236)
T ss_dssp EEEEEET------TTSHHHH---HHHHHHHHTTEEEEEEESSCC
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEecCcc
Confidence 5666664 4567665 488999999999998876543
No 284
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=40.52 E-value=28 Score=29.54 Aligned_cols=42 Identities=14% Similarity=0.037 Sum_probs=28.2
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHh-CCCEEEEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALAR-RGHRVHIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~~ 129 (493)
.+++||++... .|.+......+++.|.+ .|++|+++.+....
T Consensus 17 l~~k~IllgvT-------Gsiaa~k~~~lv~~L~~~~g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 17 ERKFHVLVGVT-------GSVAALKLPLLVSKLLDIPGLEVAVVTTERAK 59 (206)
T ss_dssp CSSEEEEEEEC-------SSGGGGTHHHHHHHHC---CEEEEEEECTGGG
T ss_pred cCCCEEEEEEe-------ChHHHHHHHHHHHHHhcccCCEEEEEECHhHH
Confidence 34567887764 13334456889999998 89999999876543
No 285
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=40.50 E-value=27 Score=29.22 Aligned_cols=40 Identities=18% Similarity=0.146 Sum_probs=30.9
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|||+++-. +..|..+..+..+++.|.+.|++|.++....
T Consensus 21 ~~kv~IvY~-----S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~~ 60 (191)
T 1bvy_F 21 NTPLLVLYG-----SNMGTAEGTARDLADIAMSKGFAPQVATLDS 60 (191)
T ss_dssp CCCEEEEEE-----CSSSHHHHHHHHHHHHHHTTTCCCEEEEGGG
T ss_pred CCeEEEEEE-----CCChHHHHHHHHHHHHHHhCCCceEEeeHHH
Confidence 456666643 3668889999999999999999998876553
No 286
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=40.45 E-value=1e+02 Score=22.18 Aligned_cols=74 Identities=8% Similarity=0.123 Sum_probs=43.3
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH---cCCcEEec-CCCCCccceeeeCcceEEECC-CHHHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMAS-RFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAA 445 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s-~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~l 445 (493)
++..+.+.. .|++++-..-++.-|..+++.+. ...|+|.. .......+....+..+++..| +.+++..++.++
T Consensus 35 ~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~ 114 (116)
T 3a10_A 35 EEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHYRSDMSSWAADEYVVKSFNFDELKEKVKKL 114 (116)
T ss_dssp HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCGGGGGCGGGGGSSEEEECCSSTHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCcchHHHHHhccccceEECCCCHHHHHHHHHHH
Confidence 444444443 47777633222334566676664 35677653 222211133455678999999 999999998876
Q ss_pred H
Q 039338 446 V 446 (493)
Q Consensus 446 l 446 (493)
+
T Consensus 115 ~ 115 (116)
T 3a10_A 115 L 115 (116)
T ss_dssp T
T ss_pred h
Confidence 4
No 287
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=40.39 E-value=34 Score=29.05 Aligned_cols=41 Identities=5% Similarity=-0.050 Sum_probs=28.5
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.+++||++... . +........+++.|.+.| +|+++.+....
T Consensus 17 l~~k~IllgvT------G-siaa~k~~~ll~~L~~~g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 17 PRKPRVLLAAS------G-SVAAIKFGNLCHCFTEWA-EVRAVVTKSSL 57 (209)
T ss_dssp --CCEEEEEEC------S-SGGGGGHHHHHHHHHTTS-EEEEEECTGGG
T ss_pred cCCCEEEEEEe------C-cHHHHHHHHHHHHHhcCC-CEEEEEcchHH
Confidence 44578888775 1 223345888999999999 99999876543
No 288
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=40.27 E-value=7.8 Score=32.09 Aligned_cols=68 Identities=13% Similarity=0.077 Sum_probs=41.9
Q ss_pred HHHHcCEEEeCCCCCCCCC--hHHHHHHHcCCcEEecCCCCCccceeee-CcceEEECCCHHHHHHHHHHHHHc
Q 039338 378 FYNAIDIFVNPTLRPQGLD--LTLMEAMMSGKPVMASRFPSIKGTIVVD-DEFGFMFAPNVESLHKTLEAAVSE 448 (493)
Q Consensus 378 ~~~~adv~v~ps~~~eg~~--~~~~EAm~~G~PvI~s~~~~~~~e~v~~-~~~G~~~~~d~~~l~~~i~~ll~~ 448 (493)
+...||.+|.-. .|+| ..+.||+..++||++-+.-+..+..+.+ ....+.+..|++++.+.|.+.+..
T Consensus 104 m~~~sda~Ivlp---Gg~GTL~E~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~~~ 174 (176)
T 2iz6_A 104 NALSSNVLVAVG---MGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLAK 174 (176)
T ss_dssp CGGGCSEEEEES---CCHHHHHHHHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEEEESSHHHHHHHHHHHHHC
T ss_pred HHHhCCEEEEec---CCccHHHHHHHHHHhCCcEEEEcCcccccccCChhhcCeEEEcCCHHHHHHHHHHHHHh
Confidence 345578776522 3444 3478889999999998762222112222 223445555999999988887654
No 289
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=40.27 E-value=34 Score=31.26 Aligned_cols=36 Identities=25% Similarity=0.175 Sum_probs=25.2
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|+|++.. ..||.+. .+++.|.++|++|.++.....
T Consensus 5 ~~~vlVTG-------atG~iG~---~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 5 KGTILVTG-------GAGYIGS---HTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp SCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEECCCSS
T ss_pred CcEEEEec-------CCcHHHH---HHHHHHHHCCCcEEEEecCCc
Confidence 45665543 4466665 488999999999998865443
No 290
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=40.22 E-value=52 Score=29.28 Aligned_cols=42 Identities=12% Similarity=-0.024 Sum_probs=27.8
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
..++|++|+.+ |- =.+..+-.+...+.++|++|++++.....
T Consensus 6 ~~~rvLvv~aH-PD-----De~lg~GGtia~~~~~G~~V~vv~~T~G~ 47 (273)
T 3dff_A 6 GATRLLAISPH-LD-----DAVLSFGAGLAQAAQDGANVLVYTVFAGA 47 (273)
T ss_dssp --CEEEEEESS-TT-----HHHHHHHHHHHHHHHTTCEEEEEETTCCC
T ss_pred CCCCEEEEEeC-CC-----hHHHhHHHHHHHHHHCCCcEEEEEEeCCC
Confidence 36789999984 32 22333444555667789999999987765
No 291
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=40.21 E-value=51 Score=29.20 Aligned_cols=44 Identities=20% Similarity=0.253 Sum_probs=33.5
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.++||++.|+.. ...-|-...+.+|+..|++.|..|.++-.+..
T Consensus 79 ~~~~kvI~vts~----kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 79 DSAVQSIVITSE----APGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp TCCCCEEEEECS----STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCCeEEEEECC----CCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 346788877762 13456777889999999999999999876644
No 292
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=40.19 E-value=36 Score=30.01 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=25.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|+++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 21 ~k~~lVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVTG------GSRGLGF---GIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 46777774 4577665 4889999999999887654
No 293
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=40.19 E-value=31 Score=30.46 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=26.7
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
...|+++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 23 ~~~k~vlITG------as~gIG~---~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 23 QAKRVAFVTG------GMGGLGA---AISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp -CCCEEEETT------TTSHHHH---HHHHHHHTTTCEEEEEECS
T ss_pred hcCCEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEcCC
Confidence 3457888885 4577665 4889999999999887643
No 294
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=40.10 E-value=28 Score=31.62 Aligned_cols=36 Identities=14% Similarity=0.418 Sum_probs=26.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.+.|||++|.. |-++ ..++..|.+.||+|+++....
T Consensus 19 ~~m~~I~iIG~--------G~mG---~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGL--------GIMG---KAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeCCH
Confidence 34589999953 4333 458889999999999875443
No 295
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=40.00 E-value=43 Score=29.66 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=25.1
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 23 k~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 23 EVALVTG------ATSGIGLE---IARRLGKEGLRVFVCARG 55 (277)
T ss_dssp CEEEEET------CSSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCCHHHHH---HHHHHHHCCCEEEEEeCC
Confidence 5777774 45777754 889999999999887654
No 296
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=39.85 E-value=24 Score=29.30 Aligned_cols=38 Identities=18% Similarity=0.180 Sum_probs=27.6
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
||++... . |.+......+++.|.+.|++|+++.+....
T Consensus 4 ~IllgvT------G-s~aa~k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 4 KLLICAT------A-SINVININHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CEEEEEC------S-CGGGGGHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred EEEEEEE------C-HHHHHHHHHHHHHHHHCCCEEEEEEchhHH
Confidence 5666654 1 333346889999999999999999876544
No 297
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=39.83 E-value=35 Score=29.93 Aligned_cols=33 Identities=21% Similarity=0.280 Sum_probs=25.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
.|+++|+. ..||.++. +++.|+++|++|.+...
T Consensus 4 ~k~vlVTG------as~gIG~a---ia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 4 NKCALVTG------SSRGVGKA---AAIRLAENGYNIVINYA 36 (258)
T ss_dssp CCEEEESS------CSSHHHHH---HHHHHHHTTCEEEEEES
T ss_pred CCEEEEec------CCchHHHH---HHHHHHHCCCEEEEEcC
Confidence 46788875 55777754 88999999999988643
No 298
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=39.81 E-value=32 Score=31.74 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=26.1
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.|+|++.. ..|+.+. .+++.|.++||+|+++......
T Consensus 9 ~~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~~~ 45 (357)
T 1rkx_A 9 GKRVFVTG-------HTGFKGG---WLSLWLQTMGATVKGYSLTAPT 45 (357)
T ss_dssp TCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEESSCSS
T ss_pred CCEEEEEC-------CCchHHH---HHHHHHHhCCCeEEEEeCCCcc
Confidence 46776653 3466655 4788999999999998865433
No 299
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=39.75 E-value=35 Score=29.53 Aligned_cols=28 Identities=18% Similarity=0.310 Sum_probs=22.1
Q ss_pred CCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 98 TPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
+.|+++. .+++++.++|++|++++....
T Consensus 27 SSG~mG~---aiA~~~~~~Ga~V~lv~~~~~ 54 (232)
T 2gk4_A 27 STGHLGK---IITETLLSAGYEVCLITTKRA 54 (232)
T ss_dssp CCCHHHH---HHHHHHHHTTCEEEEEECTTS
T ss_pred CCCHHHH---HHHHHHHHCCCEEEEEeCCcc
Confidence 4566664 489999999999999987643
No 300
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=39.68 E-value=1.9e+02 Score=26.08 Aligned_cols=43 Identities=9% Similarity=0.081 Sum_probs=29.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.+..+|+++.+.. ...-....+..+.+++.+.|+++.++....
T Consensus 62 ~~~~~Igvi~~~~----~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 104 (333)
T 3jvd_A 62 HRSALVGVIVPDL----SNEYYSESLQTIQQDLKAAGYQMLVAEANS 104 (333)
T ss_dssp --CCEEEEEESCS----SSHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred CCCCEEEEEeCCC----cChHHHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3456799998753 223345566777888888999999886543
No 301
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=39.67 E-value=13 Score=33.46 Aligned_cols=59 Identities=10% Similarity=-0.067 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcccee---e--eCcceEEECC
Q 039338 373 AELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIV---V--DDEFGFMFAP 433 (493)
Q Consensus 373 ~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v---~--~~~~G~~~~~ 433 (493)
+++.+++..+|++|.-+. ++..--.+..++..|+|+|+.-.|... +.. . ....++++.+
T Consensus 80 ~dl~~ll~~aDVvIDFT~-p~a~~~~~~~~l~~Gv~vViGTTG~~~-e~~~~L~~aa~~~~~~~a~ 143 (288)
T 3ijp_A 80 DDPESAFSNTEGILDFSQ-PQASVLYANYAAQKSLIHIIGTTGFSK-TEEAQIADFAKYTTIVKSG 143 (288)
T ss_dssp SCHHHHTTSCSEEEECSC-HHHHHHHHHHHHHHTCEEEECCCCCCH-HHHHHHHHHHTTSEEEECS
T ss_pred CCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEECCCCCH-HHHHHHHHHhCcCCEEEEC
Confidence 456667779999997552 333333456689999999986665433 211 1 1346677766
No 302
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=39.57 E-value=44 Score=30.38 Aligned_cols=36 Identities=14% Similarity=0.026 Sum_probs=25.2
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
++.|+|++.. ..|+.+. .+++.|.++||+|.++...
T Consensus 9 ~~~~~vlVTG-------atG~iG~---~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTG-------ANGFVAS---HVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEC-------CccHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 3456776653 3466665 4788899999999988754
No 303
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=39.53 E-value=36 Score=29.80 Aligned_cols=43 Identities=21% Similarity=0.204 Sum_probs=29.8
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
++|||..|+.. ...-|-...+.+|+..|+++|+.|.++-.+..
T Consensus 4 ~~~~vI~v~s~----kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 4 AKVRRIALANQ----KGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp -CCCEEEECCS----SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCEEEEEEeC----CCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 35777766641 12234456678999999999999999976643
No 304
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=39.53 E-value=1.2e+02 Score=25.83 Aligned_cols=67 Identities=10% Similarity=0.146 Sum_probs=42.9
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc--CCcEEec-CCCCCc--cceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS--GKPVMAS-RFPSIK--GTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~--G~PvI~s-~~~~~~--~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+.. ++|||.. ...... .+.+..|..|++..| ++++|..+|..++..
T Consensus 50 ~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~~~~~ 122 (238)
T 2gwr_A 50 PDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 122 (238)
T ss_dssp CSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEETTCCSCHHHHHHTTCCEEEEESCCHHHHHHHHHHHCCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHhh
Confidence 577776432233446677776653 6777754 222211 134456788999999 999999999988654
No 305
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=39.51 E-value=73 Score=26.02 Aligned_cols=50 Identities=12% Similarity=0.161 Sum_probs=28.8
Q ss_pred CCCceEEEEEeccCCC---CCCCCch-HHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 80 SKFTLKIAVFSRKWPI---STTPGGM-ERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~---~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.++++||++|+-.=-. ....|-. ...-..|++.|.+.|++|.-...-.++
T Consensus 12 ~~~~~~v~iitvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~Dd 65 (178)
T 3iwt_A 12 APKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDD 65 (178)
T ss_dssp -CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSC
T ss_pred CCCCCEEEEEEEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeCCC
Confidence 4578999999852000 0000110 222345889999999999877655444
No 306
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=39.43 E-value=42 Score=29.46 Aligned_cols=41 Identities=10% Similarity=0.122 Sum_probs=30.3
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|||..|+. ...-|-...+.+|+..|+++|+.|.++-.+...
T Consensus 1 M~vI~vs~-----KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q~ 41 (269)
T 1cp2_A 1 MRQVAIYG-----KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKA 41 (269)
T ss_dssp CEEEEEEE-----CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTS
T ss_pred CcEEEEec-----CCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCCC
Confidence 66666653 144466677889999999999999998776544
No 307
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=39.24 E-value=32 Score=30.49 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=26.8
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.+|+++|+. ..||.+. .+++.|.++|++|.++....
T Consensus 4 ~~k~vlVTG------as~gIG~---~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 4 SAKVWLVTG------ASSGFGR---AIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp CCCEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEESSG
T ss_pred CCcEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEeCCH
Confidence 356778874 5577765 48899999999998876543
No 308
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=39.22 E-value=1.1e+02 Score=22.24 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=45.7
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc--CCcEEec-CCCCCc--cceeeeCcceEEECC-CHHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS--GKPVMAS-RFPSIK--GTIVVDDEFGFMFAP-NVESLHKTLEA 444 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~--G~PvI~s-~~~~~~--~e~v~~~~~G~~~~~-d~~~l~~~i~~ 444 (493)
++....+.. .|++++-..-++.-|..+++.+.. +.|+|.. ...... .+.+..|..+++..| +.+++..++.+
T Consensus 36 ~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~ 115 (122)
T 1zgz_A 36 AGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKN 115 (122)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCChhhHHHHHHhCHHHHccCCCCHHHHHHHHHH
Confidence 455555443 577776332223346677777653 5676654 322211 123445778999999 99999999988
Q ss_pred HHH
Q 039338 445 AVS 447 (493)
Q Consensus 445 ll~ 447 (493)
++.
T Consensus 116 ~~~ 118 (122)
T 1zgz_A 116 LLW 118 (122)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 309
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=39.16 E-value=45 Score=29.73 Aligned_cols=41 Identities=20% Similarity=0.203 Sum_probs=30.9
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
||+..|+. ...-|-.+.+.+|+.+|+++|+.|.++-.+...
T Consensus 2 MkvIavs~-----KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q~ 42 (289)
T 2afh_E 2 MRQCAIYG-----KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKA 42 (289)
T ss_dssp CEEEEEEE-----CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSS
T ss_pred ceEEEEeC-----CCcCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 77666653 144566777889999999999999999776544
No 310
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=39.14 E-value=25 Score=32.02 Aligned_cols=33 Identities=27% Similarity=0.453 Sum_probs=23.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|||+++.. |.++.. ++..|++.||+|+++...
T Consensus 2 ~mkI~IiGa--------GaiG~~---~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGA--------GALGLY---YGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp --CEEEECC--------STTHHH---HHHHHHHTSCCEEEECST
T ss_pred CCEEEEECc--------CHHHHH---HHHHHHHCCCeEEEEEcC
Confidence 489999964 444443 677888899999998764
No 311
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=39.09 E-value=76 Score=23.82 Aligned_cols=66 Identities=9% Similarity=0.133 Sum_probs=40.2
Q ss_pred CEEEeCCCCCCCCChHHHHHHH--c-----CCc-EE-ecCCCCCc--cceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 383 DIFVNPTLRPQGLDLTLMEAMM--S-----GKP-VM-ASRFPSIK--GTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 383 dv~v~ps~~~eg~~~~~~EAm~--~-----G~P-vI-~s~~~~~~--~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
|++++-..-++.-|..+++.+. . ..| +| .|...... .+....|..+++..| +.+++.+++.+++..
T Consensus 52 dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 129 (136)
T 1dcf_A 52 KVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLLEP 129 (136)
T ss_dssp SEEEEECCSSTTTTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhhhhccCCCceEEEEeCCCCHHHHHHHHHcCCCeEEECCCCHHHHHHHHHHHhch
Confidence 7777632222334556666664 1 234 44 44433321 123445778999999 999999999998765
No 312
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=39.07 E-value=44 Score=25.27 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=30.1
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|++++...=| ..+...+....++.++...||+|.|+-..+.-
T Consensus 3 k~~~vv~~~P---~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV 44 (119)
T 2d1p_B 3 RIAFVFSTAP---HGTAAGREGLDALLATSALTDDLAVFFIADGV 44 (119)
T ss_dssp CEEEEECSCT---TTSTHHHHHHHHHHHHHTTCSCEEEEECGGGG
T ss_pred EEEEEEcCCC---CCcHHHHHHHHHHHHHHhCCCCEEEEEehHHH
Confidence 4888877532 22334466788999999999999998876544
No 313
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=39.01 E-value=27 Score=26.79 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=44.6
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH-cCCcEEec-CCCCCccceeeeCcceEEECC-CHHHHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM-SGKPVMAS-RFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAV 446 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~-~G~PvI~s-~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll 446 (493)
++..+++.. -|++++--.=++.-|..+++.+. .++|||.. ..+... .....+..+++..| +.++|.++|.+++
T Consensus 43 ~eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa~~~~~-~~~~~g~~~yl~KP~~~~~L~~~l~~~~ 120 (123)
T 2lpm_A 43 QEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATGYGSKG-LDTRYSNIPLLTKPFLDSELEAVLVQIS 120 (123)
T ss_dssp HHHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCTTCTTS-CCSSSCSCSCBCSSSSHHHHHHHHSTTC
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEecCccHH-HHHhCCCCcEEECCCCHHHHHHHHHHHH
Confidence 444444444 47777633223445667777764 57887654 222211 22344667899999 9999999887654
No 314
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=38.99 E-value=62 Score=28.26 Aligned_cols=44 Identities=16% Similarity=0.050 Sum_probs=29.2
Q ss_pred eEEEEEeccC-----CCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKW-----PISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~-----p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
+|||++.... ..+...|=-..-+..-...|.+.|++|+++++..
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3799988753 1111123334446667889999999999999764
No 315
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=38.90 E-value=28 Score=29.58 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=23.7
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
+++.|||+++.. |.++ ..+++.|.+.||+|.++...
T Consensus 25 ~~~~~~I~iiG~--------G~~G---~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 25 PDEAPKVGILGS--------GDFA---RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp ----CCEEEECC--------SHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCEEEEEcc--------CHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 345689999953 4444 44788888999999887644
No 316
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=38.88 E-value=34 Score=29.41 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=25.7
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCC--EEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH--RVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~ 129 (493)
.|+|++.. ..||.++. +++.|.++|+ +|.++......
T Consensus 18 ~~~vlVtG-------asg~iG~~---l~~~L~~~G~~~~V~~~~r~~~~ 56 (242)
T 2bka_A 18 NKSVFILG-------ASGETGRV---LLKEILEQGLFSKVTLIGRRKLT 56 (242)
T ss_dssp CCEEEEEC-------TTSHHHHH---HHHHHHHHTCCSEEEEEESSCCC
T ss_pred CCeEEEEC-------CCcHHHHH---HHHHHHcCCCCCEEEEEEcCCCC
Confidence 35565553 44676654 7889999999 99998765443
No 317
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=38.77 E-value=27 Score=30.11 Aligned_cols=32 Identities=22% Similarity=0.431 Sum_probs=23.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFT 124 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 124 (493)
||.++|+. ..||.+. .+++.|.++|++|.++.
T Consensus 1 ~k~vlITG------asggiG~---~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 1 MRKALITG------ASRGIGR---AIALRLAEDGFALAIHY 32 (245)
T ss_dssp CCEEEETT------TTSHHHH---HHHHHHHTTTCEEEEEE
T ss_pred CCEEEEeC------CCchHHH---HHHHHHHHCCCEEEEEc
Confidence 45666764 4466665 48899999999998874
No 318
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=38.71 E-value=35 Score=26.34 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=20.2
Q ss_pred CCCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEE
Q 039338 79 PSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIF 123 (493)
Q Consensus 79 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~ 123 (493)
...+.|||+++..+ ......+...|.+.|++|..+
T Consensus 10 ~~~~~~~iLivdd~----------~~~~~~l~~~L~~~g~~v~~~ 44 (143)
T 3m6m_D 10 ARVRSMRMLVADDH----------EANRMVLQRLLEKAGHKVLCV 44 (143)
T ss_dssp -----CEEEEECSS----------HHHHHHHHHHHHC--CEEEEE
T ss_pred cccccceEEEEeCC----------HHHHHHHHHHHHHcCCeEEEe
Confidence 34567999999763 334556777788889988754
No 319
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=38.56 E-value=32 Score=31.20 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=24.8
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
+|||+++.. |.++. .++..|. .|++|+++....
T Consensus 2 ~mkI~IiGa--------Ga~G~---~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGG--------GSVGL---LCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECC--------SHHHH---HHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECC--------CHHHH---HHHHHHh-cCCceEEEECCH
Confidence 589999954 66554 3677788 899999987653
No 320
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=38.25 E-value=1.2e+02 Score=24.69 Aligned_cols=67 Identities=12% Similarity=0.140 Sum_probs=40.4
Q ss_pred HcCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 381 AIDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 381 ~adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
..|++++-..-++.-|. +.+.+. ..+|||..-..+-.+ +.+..|..+++..| +.++|..++..++..
T Consensus 52 ~~dlvl~D~~mp~~~g~-l~~~~~~~~~~~~ii~lt~~~~~~~~~~a~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 52 PVDVVFTSIFQNRHHDE-IAALLAAGTPRTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp CCSEEEEECCSSTHHHH-HHHHHHHSCTTCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCccchH-HHHHHhccCCCCCEEEEEcCCChHHHHHHHHcCCCeeEecCcCHHHHHHHHHHHHHH
Confidence 35777663321121144 555554 457777543222221 23445788999999 999999999988765
No 321
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=38.16 E-value=29 Score=31.29 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=23.0
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
|||++.. ..|+.+. .+++.|.++||+|.++..
T Consensus 1 m~vlVTG-------atG~iG~---~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTG-------GAGFIGS---HIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHTTTCEEEEECC
T ss_pred CEEEEEe-------CCcHHHH---HHHHHHHHCCCEEEEEEC
Confidence 6766553 3466664 478899999999988754
No 322
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=38.12 E-value=72 Score=26.71 Aligned_cols=69 Identities=13% Similarity=0.084 Sum_probs=44.9
Q ss_pred HHcCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 380 NAIDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 380 ~~adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
...|++++-..-++.-|..+++.+. ..+|+|........+ +.+..|..|++..| +.++|..+|..++..
T Consensus 42 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~~ 117 (220)
T 1p2f_A 42 EAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLER 117 (220)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 4568887643223444666777665 467777653222211 23456788999999 999999999998764
No 323
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=38.01 E-value=30 Score=30.66 Aligned_cols=34 Identities=29% Similarity=0.267 Sum_probs=25.2
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|||++.. . |..+. .+++.|.++||+|++++...
T Consensus 5 ~~~ilVtG-------a-G~iG~---~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG-------H-GYTAR---VLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET-------C-CHHHH---HHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC-------C-cHHHH---HHHHHHHHCCCEEEEEEcCh
Confidence 37777763 3 65554 48889999999999998654
No 324
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=38.00 E-value=36 Score=29.11 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=23.6
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|.++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 6 k~vlVtG------asggiG~---~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 6 GAVLITG------ASRGIGE---ATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CEEEESS------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEECC
Confidence 3556653 4466664 5889999999999887654
No 325
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=37.87 E-value=43 Score=29.37 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=27.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|+++|+. ..||.+. .+++.|+++|++|.++.....
T Consensus 28 ~k~vlVTG------as~gIG~---aia~~l~~~G~~V~~~~r~~~ 63 (260)
T 3un1_A 28 QKVVVITG------ASQGIGA---GLVRAYRDRNYRVVATSRSIK 63 (260)
T ss_dssp CCEEEESS------CSSHHHH---HHHHHHHHTTCEEEEEESSCC
T ss_pred CCEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCChh
Confidence 35778875 5577775 488999999999998876543
No 326
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=37.77 E-value=21 Score=29.01 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=27.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|||+++-. +..|..+..+..+++.|.+.|++|.++...
T Consensus 10 ~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 47 (167)
T 1ykg_A 10 PGITIISA-----SQTGNARRVAEALRDDLLAAKLNVKLVNAG 47 (167)
T ss_dssp --CEEEEE-----CSSSHHHHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred CeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEeehh
Confidence 45655533 255888888899999999989998887543
No 327
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=37.59 E-value=2.2e+02 Score=25.22 Aligned_cols=115 Identities=14% Similarity=0.106 Sum_probs=61.8
Q ss_pred HHHHHHHhhCCCeEEEEEeCCCcH-----HHHhhhcCcEEEecCCCHHHHHHHHHH--cCEEEeCCCCC---CCCCh-HH
Q 039338 331 EAFSKLMVKYPDVYLIVAGSGPWE-----QRYKDFGHQVLVMGSMSPAELRAFYNA--IDIFVNPTLRP---QGLDL-TL 399 (493)
Q Consensus 331 ~a~~~l~~~~~~~~l~i~G~g~~~-----~~~~~l~~~V~~~g~~~~~~~~~~~~~--adv~v~ps~~~---eg~~~-~~ 399 (493)
.+...+... ...++.++-+.+.. ..+++.+-.|.- ..-+.++..+.+.. .|++++--.-+ .|+-+ ..
T Consensus 150 rA~~~Lr~~-l~~rILvVdD~~~~~~~l~~~L~~~g~~v~~-~a~~g~eAl~~~~~~~~dlvl~D~~MPd~mdG~e~~~~ 227 (286)
T 3n0r_A 150 DAQAEIDAE-LATEVLIIEDEPVIAADIEALVRELGHDVTD-IAATRGEALEAVTRRTPGLVLADIQLADGSSGIDAVKD 227 (286)
T ss_dssp HHHHHHHTS-CCCEEEEECCSHHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHCCCSEEEEESCCTTSCCTTTTTHH
T ss_pred HHHhhhhcc-CCCcEEEEcCCHHHHHHHHHHhhccCceEEE-EeCCHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHH
Confidence 344444433 24466677664422 222233333330 12234566666655 58887622111 23221 22
Q ss_pred HHHHHcCCcEEecCC-CCCccceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 400 MEAMMSGKPVMASRF-PSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 400 ~EAm~~G~PvI~s~~-~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
+-... .+|||..-. +....+....|..+++..| ++++|..+|.+++..
T Consensus 228 ir~~~-~~piI~lT~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~~ 277 (286)
T 3n0r_A 228 ILGRM-DVPVIFITAFPERLLTGERPEPTFLITKPFQPETVKAAIGQALFF 277 (286)
T ss_dssp HHHHT-TCCEEEEESCGGGGCCSSSCCCSSEEESSCCHHHHHHHHHHHHHH
T ss_pred HHhcC-CCCEEEEeCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 22333 899987532 2111133456778899999 999999999999876
No 328
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=37.44 E-value=1.1e+02 Score=22.91 Aligned_cols=67 Identities=15% Similarity=0.182 Sum_probs=43.2
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc----CCcEEec-CCCCCc--cceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS----GKPVMAS-RFPSIK--GTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~----G~PvI~s-~~~~~~--~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+.. ..|||.. ...... .+....|..+++..| +.++|.++|.+++..
T Consensus 53 ~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 127 (133)
T 2r25_B 53 YNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFCAA 127 (133)
T ss_dssp CSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHCTT
T ss_pred CCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 588887432233446677777753 4577653 332211 123445778999999 999999999988654
No 329
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=37.38 E-value=69 Score=26.35 Aligned_cols=43 Identities=16% Similarity=0.167 Sum_probs=30.4
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.++.|||+++... |-...-+....+.|.+.|++|.+++.....
T Consensus 6 ~~~~~~v~il~~~-------g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~ 48 (190)
T 2vrn_A 6 DLTGKKIAILAAD-------GVEEIELTSPRAAIEAAGGTTELISLEPGE 48 (190)
T ss_dssp CCTTCEEEEECCT-------TCBHHHHHHHHHHHHHTTCEEEEEESSSSE
T ss_pred CCCCCEEEEEeCC-------CCCHHHHHHHHHHHHHCCCEEEEEecCCCc
Confidence 4556899999741 222334666788899999999999876543
No 330
>1fjk_A Cardiac phospholamban; helix, membrane protein; NMR {Sus scrofa} SCOP: j.37.1.1 PDB: 1fjp_A 2kyv_A 1zll_A 2hyn_A 1n7l_A 2kb7_P 1plp_A
Probab=37.24 E-value=21 Score=21.35 Aligned_cols=19 Identities=26% Similarity=0.628 Sum_probs=12.5
Q ss_pred chhhhHHHHHHHHHHHHHH
Q 039338 15 WQSNLCITLFFIVIFTIPA 33 (493)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~ 33 (493)
.+.++|.+|+|++|.+|-.
T Consensus 31 lfvnfclilicllli~iiv 49 (52)
T 1fjk_A 31 LFINFCLILIFLLLICIIV 49 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4567888887766665544
No 331
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=37.17 E-value=40 Score=29.76 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=25.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|+++|+. ..||.++ .+++.|+++|++|.+....
T Consensus 4 ~k~~lVTG------as~GIG~---aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 4 DKVILITG------ASGGIGE---GIARELGVAGAKILLGARR 37 (264)
T ss_dssp TCEEEESS------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeC------CccHHHH---HHHHHHHHCCCEEEEEECC
Confidence 36778875 4577765 4889999999999887654
No 332
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=37.16 E-value=43 Score=30.49 Aligned_cols=34 Identities=18% Similarity=0.130 Sum_probs=23.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|||++.. ..|+.+. .+++.|.++||+|.++...
T Consensus 9 ~~~vlVTG-------atGfIG~---~l~~~Ll~~G~~V~~~~r~ 42 (338)
T 2rh8_A 9 KKTACVVG-------GTGFVAS---LLVKLLLQKGYAVNTTVRD 42 (338)
T ss_dssp CCEEEEEC-------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC-------CchHHHH---HHHHHHHHCCCEEEEEEcC
Confidence 45665543 3466665 4888999999999887654
No 333
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=37.13 E-value=82 Score=28.47 Aligned_cols=105 Identities=12% Similarity=0.107 Sum_probs=54.6
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA 158 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (493)
.++|||+++... .|. .+..|..+.... +.+|.++.+.... ..... ...+.+........
T Consensus 103 ~~~~ri~vl~Sg-------~g~--nl~~ll~~~~~g~l~~~I~~Visn~~~--~~~~A-------~~~gIp~~~~~~~~- 163 (302)
T 3o1l_A 103 AQKKRVVLMASR-------ESH--CLADLLHRWHSDELDCDIACVISNHQD--LRSMV-------EWHDIPYYHVPVDP- 163 (302)
T ss_dssp TSCCEEEEEECS-------CCH--HHHHHHHHHHTTCSCSEEEEEEESSST--THHHH-------HTTTCCEEECCCCS-
T ss_pred CCCcEEEEEEeC-------Cch--hHHHHHHHHHCCCCCcEEEEEEECcHH--HHHHH-------HHcCCCEEEcCCCc-
Confidence 457899998751 232 466676665543 4688777765544 11111 11233322221111
Q ss_pred CccccccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 159 DKWRYSKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
......-..+.+.+++.+||+|++.++. ++.-+....+.-++.+|.
T Consensus 164 --~~r~~~~~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHp 211 (302)
T 3o1l_A 164 --KDKEPAFAEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHH 211 (302)
T ss_dssp --SCCHHHHHHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEES
T ss_pred --CCHHHHHHHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCc
Confidence 1111122456677778899999987652 333333333335777775
No 334
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=37.08 E-value=42 Score=32.04 Aligned_cols=36 Identities=17% Similarity=0.315 Sum_probs=24.9
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
..||++++..- ....+.++.++.|++|++++.....
T Consensus 5 ~k~l~Il~~~~-----------~~~~i~~aa~~lG~~vv~v~~~~~~ 40 (425)
T 3vot_A 5 NKNLAIICQNK-----------HLPFIFEEAERLGLKVTFFYNSAED 40 (425)
T ss_dssp CCEEEEECCCT-----------TCCHHHHHHHHTTCEEEEEEETTSC
T ss_pred CcEEEEECCCh-----------hHHHHHHHHHHCCCEEEEEECCCcc
Confidence 45688886421 1234678888999999999876554
No 335
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=36.97 E-value=45 Score=26.39 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=26.3
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
...|+|+++.. |..+ ..+++.|.+.|++|+++.....
T Consensus 17 ~~~~~v~IiG~--------G~iG---~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGC--------GRLG---SLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECCHH
Confidence 34578988842 4444 4578888999999999876543
No 336
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=36.91 E-value=47 Score=28.13 Aligned_cols=44 Identities=5% Similarity=-0.008 Sum_probs=29.6
Q ss_pred eEEEEEeccCCCCCCCCchHHH-HHHHHHHHHhC--CCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERH-AHTLHVALARR--GHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~-~~~l~~~L~~~--G~~V~v~~~~~~~ 129 (493)
|||++|..+ |. +..++.... +..+++.+.+. |++|.++......
T Consensus 5 ~kiLiI~gS-pr-~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~~~~ 51 (211)
T 3p0r_A 5 TKVLFVKAN-NR-PAEQAVSVKLYEAFLASYKEAHPNDTVVELDLYKEE 51 (211)
T ss_dssp CEEEEEECC-CS-CTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGGGSC
T ss_pred CEEEEEEeC-CC-CCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 699999985 21 014554444 45667777776 8999998876544
No 337
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=36.90 E-value=52 Score=24.42 Aligned_cols=35 Identities=14% Similarity=0.079 Sum_probs=0.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
|..+||+++... ......+.+.|.+.|++|..+..
T Consensus 1 M~~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~~~ 35 (127)
T 3i42_A 1 MSLQQALIVEDY----------QAAAETFKELLEMLGFQADYVMS 35 (127)
T ss_dssp -CCEEEEEECSC----------HHHHHHHHHHHHHTTEEEEEESS
T ss_pred CCcceEEEEcCC----------HHHHHHHHHHHHHcCCCEEEECC
No 338
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=36.84 E-value=23 Score=33.55 Aligned_cols=47 Identities=9% Similarity=-0.022 Sum_probs=31.5
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|++|||+++.... +....-.-.....++++|.+.||+|+.+.....
T Consensus 19 ~m~~~~v~vl~GG~--S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~ 65 (386)
T 3e5n_A 19 HMRKIRVGLIFGGK--SAEHEVSLQSARNILDALDPQRFEPVLIGIDKQ 65 (386)
T ss_dssp --CCEEEEEEEECS--STTHHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred hcCCceEEEEeccC--CCCchhHHHHHHHHHHHhCccCCEEEEEEECCC
Confidence 56789999998642 112212224456788999999999999986644
No 339
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=36.75 E-value=32 Score=31.00 Aligned_cols=32 Identities=13% Similarity=0.137 Sum_probs=22.8
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
|||++.. ..|+.+. .+++.|.++||+|+++..
T Consensus 3 ~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r 34 (315)
T 2ydy_A 3 RRVLVTG-------ATGLLGR---AVHKEFQQNNWHAVGCGF 34 (315)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHTTTCEEEEEC-
T ss_pred CeEEEEC-------CCcHHHH---HHHHHHHhCCCeEEEEcc
Confidence 5666653 3466665 488899999999998864
No 340
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=36.72 E-value=48 Score=27.99 Aligned_cols=39 Identities=15% Similarity=0.016 Sum_probs=26.2
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.+-||++.+.. ...+ +.-..-++..|...||+|..+...
T Consensus 87 ~~~~vll~~~~----gd~H--~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 87 SVGKIVLGTVK----GDLH--DIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCEEEEEEBT----TCCC--CHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCEEEEEeCC----Cccc--HHHHHHHHHHHHHCCCEEEECCCC
Confidence 34578888762 1333 333566788889999999887653
No 341
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=36.68 E-value=44 Score=28.95 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=25.3
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.+. .+++.|.++|++|.+....
T Consensus 5 k~~lVTG------as~gIG~---~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 5 KSALVTG------ASRGIGR---SIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp CEEEETT------CSSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 6777874 5577775 4889999999999887654
No 342
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=36.67 E-value=1e+02 Score=26.58 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=42.4
Q ss_pred CcEEEecCCC--HHHHHHHHHHcCEEEe--CCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHH
Q 039338 362 HQVLVMGSMS--PAELRAFYNAIDIFVN--PTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVES 437 (493)
Q Consensus 362 ~~V~~~g~~~--~~~~~~~~~~adv~v~--ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~ 437 (493)
++|.|.|..+ -+...+.+.+||++|. .|....++..-+..|-..|.|+|.-+.+... .+....+.+..+.++
T Consensus 146 P~vv~FGE~p~~~~~a~~~~~~adl~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~~t~----~~~~~~~~i~~~~~~ 221 (235)
T 1s5p_A 146 PHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPSQ----VGNEFAEKYYGPASQ 221 (235)
T ss_dssp EEECCTTSCCSSHHHHHHHHHHCSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSSCC-------CCSEEEESCHHH
T ss_pred CcEEEeCCCHHHHHHHHHHHhcCCEEEEECcCCchhhHHHHHHHHHHcCCeEEEEECCCCC----CCccccEEEeCCHHH
Confidence 5666666542 2456678889999887 3322222222234455679999988765433 122344555545555
Q ss_pred HHHHH
Q 039338 438 LHKTL 442 (493)
Q Consensus 438 l~~~i 442 (493)
....|
T Consensus 222 ~l~~l 226 (235)
T 1s5p_A 222 VVPEF 226 (235)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 343
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=36.66 E-value=29 Score=29.15 Aligned_cols=38 Identities=3% Similarity=-0.118 Sum_probs=27.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
..||++... . +.+......+++.|.+.|++|+++.+..
T Consensus 8 ~k~IllgvT------G-s~aa~k~~~l~~~L~~~g~~V~vv~T~~ 45 (194)
T 1p3y_1 8 DKKLLIGIC------G-SISSVGISSYLLYFKSFFKEIRVVMTKT 45 (194)
T ss_dssp GCEEEEEEC------S-CGGGGGTHHHHHHHTTTSSEEEEEECHH
T ss_pred CCEEEEEEE------C-HHHHHHHHHHHHHHHHCCCEEEEEEchh
Confidence 346777664 2 3333357889999999999999998754
No 344
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=36.61 E-value=30 Score=31.53 Aligned_cols=35 Identities=11% Similarity=0.068 Sum_probs=23.7
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC--CEEEEEecC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG--HRVHIFTSP 126 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~ 126 (493)
..|||++.. ..|+.+.. +++.|.++| ++|.++...
T Consensus 2 ~~m~vlVTG-------atG~iG~~---l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTG-------GMGFIGSN---FIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp -CCEEEEET-------TTSHHHHH---HHHHHHHHCTTCEEEEEECC
T ss_pred CCCeEEEEC-------CCchHHHH---HHHHHHHhCCCCEEEEEecC
Confidence 358876653 34666654 788888886 899888654
No 345
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=36.58 E-value=54 Score=29.53 Aligned_cols=44 Identities=16% Similarity=0.073 Sum_probs=32.4
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.++|||+.|+. ...-|-...+.+|+.+|+++|..|.++-.+...
T Consensus 38 ~~~~~vI~v~~-----KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~~ 81 (307)
T 3end_A 38 ITGAKVFAVYG-----KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKH 81 (307)
T ss_dssp --CCEEEEEEC-----STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSC
T ss_pred cCCceEEEEEC-----CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 44677776663 244567778899999999999999999876533
No 346
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=36.55 E-value=51 Score=28.37 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=25.6
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|+++|+. ..||.+. .+++.|.++|++|.++...
T Consensus 14 ~k~vlITG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 14 GRVILVTG------AARGIGA---AAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TCEEEESS------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeC------CCChHHH---HHHHHHHHCCCEEEEEecC
Confidence 45777774 4577765 4889999999999887654
No 347
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=36.49 E-value=33 Score=31.07 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=24.9
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|+|+++. ..|+.+.. +++.|.++||+|.+++...
T Consensus 4 ~~~ilVtG-------atG~iG~~---l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYG-------GTGYIGKF---MVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEET-------TTSTTHHH---HHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEc-------CCchhHHH---HHHHHHhCCCcEEEEECCc
Confidence 35676664 34666654 7888899999999988654
No 348
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=36.43 E-value=58 Score=30.03 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=25.9
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHh--CCCEEEEEecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALAR--RGHRVHIFTSPVD 128 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~--~G~~V~v~~~~~~ 128 (493)
..|+|++.. ..|+.+. .+++.|.+ .|++|.++.....
T Consensus 9 ~~~~vlVTG-------atG~IG~---~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 9 ENQTILITG-------GAGFVGS---NLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp TTCEEEEET-------TTSHHHH---HHHHHHHHHCTTSEEEEEECCCC
T ss_pred CCCEEEEEC-------CCCHHHH---HHHHHHHhhCCCCeEEEEECCCc
Confidence 346666553 3466665 48889999 9999999986543
No 349
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=36.41 E-value=41 Score=30.37 Aligned_cols=27 Identities=15% Similarity=0.047 Sum_probs=20.1
Q ss_pred CCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 98 TPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
..|+.+. .+++.|.++||+|.++....
T Consensus 20 atG~iG~---~l~~~L~~~G~~V~~~~r~~ 46 (321)
T 2pk3_A 20 VAGFVGK---YLANHLTEQNVEVFGTSRNN 46 (321)
T ss_dssp TTSHHHH---HHHHHHHHTTCEEEEEESCT
T ss_pred CCChHHH---HHHHHHHHCCCEEEEEecCC
Confidence 4466654 48889999999999987543
No 350
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=36.19 E-value=55 Score=28.49 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=31.3
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFT 124 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 124 (493)
+.||.++|+.. ...-|=...+..|+++|+++|..|..+=
T Consensus 19 ~m~k~i~ItgT----~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 19 FQGHMLFISAT----NTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCCEEEEEEES----STTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hcCcEEEEEeC----CCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 35688888873 3556777788899999999999998874
No 351
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=36.13 E-value=78 Score=23.34 Aligned_cols=66 Identities=15% Similarity=0.242 Sum_probs=41.7
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHH
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVS 447 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~ 447 (493)
.|++++-..-++.-|..+++.+.. .+|+|........+ +.+..|..+++..| +.+++..++.+++.
T Consensus 50 ~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~ 124 (128)
T 1jbe_A 50 YGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 124 (128)
T ss_dssp CCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCceeecCCCHHHHHHHHHHHHH
Confidence 477766332233446677877764 46776542222111 23445778999999 99999999988764
No 352
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=36.02 E-value=1.5e+02 Score=22.77 Aligned_cols=76 Identities=13% Similarity=0.148 Sum_probs=47.1
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++....+.. .|++++-..-++.-|..+++.+.. ++|||........+ +.+..|..+++..+ +.++|.++|.
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~ 120 (153)
T 3cz5_A 41 GEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDPAELVQAIE 120 (153)
T ss_dssp HHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTSCTTHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHH
Confidence 455555543 477776432223345666666543 56776643222111 23456778999999 9999999999
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
.++..
T Consensus 121 ~~~~~ 125 (153)
T 3cz5_A 121 AILAG 125 (153)
T ss_dssp HHTTT
T ss_pred HHHhC
Confidence 99875
No 353
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=35.99 E-value=69 Score=25.68 Aligned_cols=39 Identities=15% Similarity=0.144 Sum_probs=29.1
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|||+++... |-...-+....+.|.+.|++|.+++....
T Consensus 2 ~~ki~il~~~-------g~~~~e~~~~~~~l~~ag~~v~~vs~~~~ 40 (168)
T 3l18_A 2 SMKVLFLSAD-------GFEDLELIYPLHRIKEEGHEVYVASFQRG 40 (168)
T ss_dssp CCEEEEECCT-------TBCHHHHHHHHHHHHHTTCEEEEEESSSE
T ss_pred CcEEEEEeCC-------CccHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 5899999752 33344466788889999999999987653
No 354
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=35.96 E-value=34 Score=31.18 Aligned_cols=33 Identities=27% Similarity=0.342 Sum_probs=23.2
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEE
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIF 123 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~ 123 (493)
.-..|||+++.. |.++.. ++..|++.||+|+++
T Consensus 16 ~~~~~kI~IiGa--------Ga~G~~---~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 16 YFQGMKVAIMGA--------GAVGCY---YGGMLARAGHEVILI 48 (318)
T ss_dssp ----CEEEEESC--------SHHHHH---HHHHHHHTTCEEEEE
T ss_pred hccCCcEEEECc--------CHHHHH---HHHHHHHCCCeEEEE
Confidence 345789999954 555543 778888999999998
No 355
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=35.94 E-value=48 Score=29.05 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=31.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.++|||..|+.. ...-|-...+.+|+.+|+ +|..|.++-.+...
T Consensus 24 ~~~~~vI~v~s~----kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~ 67 (267)
T 3k9g_A 24 NKKPKIITIASI----KGGVGKSTSAIILATLLS-KNNKVLLIDMDTQA 67 (267)
T ss_dssp --CCEEEEECCS----SSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTC
T ss_pred CCCCeEEEEEeC----CCCchHHHHHHHHHHHHH-CCCCEEEEECCCCC
Confidence 346777777652 244466677889999999 99999999876543
No 356
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=35.88 E-value=30 Score=32.28 Aligned_cols=35 Identities=29% Similarity=0.569 Sum_probs=26.4
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
+..|||+++.. |.++ ..++..|++.||+|.++...
T Consensus 27 ~~~mkI~VIGa--------G~mG---~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGA--------GSWG---TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECC--------SHHH---HHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 34689999964 4433 44888999999999998764
No 357
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=35.81 E-value=1.2e+02 Score=21.84 Aligned_cols=76 Identities=16% Similarity=0.195 Sum_probs=45.9
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++....+.. .|++++-..-++.-|..+++.+.. ..|+|........ .+.+..|..+++..| +.+++...+.
T Consensus 34 ~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~ 113 (121)
T 2pl1_A 34 KEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQ 113 (121)
T ss_dssp HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCCHHHHHHHHHcCccceEECCCCHHHHHHHHH
Confidence 444444443 477776332223446677777653 4677654322211 123455778999999 9999999998
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
+++..
T Consensus 114 ~~~~~ 118 (121)
T 2pl1_A 114 ALMRR 118 (121)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87653
No 358
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=35.68 E-value=64 Score=28.20 Aligned_cols=42 Identities=19% Similarity=0.139 Sum_probs=29.5
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|||+.|+.. ...-|-...+.+|+.+|+++|..|.++-.....
T Consensus 18 ~~vI~v~s~----kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSG----KGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECS----SSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcC----CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 455555541 233456677889999999999999998766543
No 359
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=35.63 E-value=46 Score=28.93 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=24.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|.++|+. ..||.++. +++.|.++|++|.++...
T Consensus 19 ~k~vlVTG------as~gIG~~---~a~~l~~~G~~V~~~~r~ 52 (249)
T 1o5i_A 19 DKGVLVLA------ASRGIGRA---VADVLSQEGAEVTICARN 52 (249)
T ss_dssp TCEEEEES------CSSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCCHHHHH---HHHHHHHCCCEEEEEcCC
Confidence 34566664 45777754 789999999999887653
No 360
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=35.51 E-value=73 Score=28.21 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=28.8
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
..|||++|+.+ | .=.+..+-.+...+.++|++|++++.....
T Consensus 6 ~~~rvLvv~aH-P-----DDe~l~~GGtia~~~~~G~~V~vv~~T~Ge 47 (270)
T 3dfi_A 6 DRTRILAISPH-L-----DDAVLSVGASLAQAEQDGGKVTVFTVFAGS 47 (270)
T ss_dssp CCSEEEEEESS-T-----THHHHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred CCCCEEEEEeC-C-----chHHHhhHHHHHHHHhCCCeEEEEEEeCCC
Confidence 35789999984 3 223333444555566789999999987766
No 361
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=35.44 E-value=48 Score=28.90 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=26.6
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|+++|+. ..||.++ .+++.|+++|++|.++......
T Consensus 8 k~~lVTG------as~gIG~---aia~~l~~~G~~V~~~~r~~~~ 43 (257)
T 3tpc_A 8 RVFIVTG------ASSGLGA---AVTRMLAQEGATVLGLDLKPPA 43 (257)
T ss_dssp CEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEESSCC-
T ss_pred CEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCChHH
Confidence 5777875 4577765 4889999999999888765443
No 362
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=35.43 E-value=69 Score=28.14 Aligned_cols=43 Identities=12% Similarity=-0.002 Sum_probs=29.6
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
.++-||++.+. ...+.+.-..-++..|...|++|..+....+.
T Consensus 121 ~~~~~vlla~~------~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~ 163 (258)
T 2i2x_B 121 KTKGTVVCHVA------EGDVHDIGKNIVTALLRANGYNVVDLGRDVPA 163 (258)
T ss_dssp CCSCEEEEEEC------TTCCCCHHHHHHHHHHHHTTCEEEEEEEECCS
T ss_pred CCCCeEEEEeC------CCCccHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 34567888875 22334444666788899999999988775444
No 363
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=35.22 E-value=1.8e+02 Score=23.69 Aligned_cols=67 Identities=16% Similarity=0.248 Sum_probs=41.9
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc--CCcEEec-CCCCC--ccceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS--GKPVMAS-RFPSI--KGTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~--G~PvI~s-~~~~~--~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+.. ..|||.. ..... ..+.+..|..+++..| +.++|..+|..++..
T Consensus 59 ~dlvi~D~~~p~~~g~~~~~~l~~~~~~pii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~ 131 (205)
T 1s8n_A 59 PDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSR 131 (205)
T ss_dssp CSEEEEESSCSSSCHHHHHHHHHHTTCSCEEEEEEGGGHHHHHTTGGGSCEEEEEESCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHHHHH
Confidence 577776332234446667776653 3466553 22111 1133456778999999 999999999998875
No 364
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=35.22 E-value=29 Score=31.24 Aligned_cols=40 Identities=13% Similarity=0.195 Sum_probs=27.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|||++++..... ..... .....+++++.++||+|.++...
T Consensus 2 m~i~il~~~~~~-~~~~~--~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIAN-INIKK--DSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGG-CCTTT--CHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHh-CCcCC--ChHHHHHHHHHHCCCEEEEEchh
Confidence 699999974211 11112 23467999999999999999765
No 365
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=35.20 E-value=1.4e+02 Score=22.21 Aligned_cols=76 Identities=14% Similarity=0.173 Sum_probs=46.0
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH---cCCcEEec-CCCCCc--cceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMAS-RFPSIK--GTIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s-~~~~~~--~e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++....+.. .|++++-..-++.-|..+++.+. .+.|+|.. ...... .+....|..|++..| +.++|..+|.
T Consensus 37 ~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~ 116 (132)
T 3crn_A 37 GEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADAYIMKPVNPRDLLEKIK 116 (132)
T ss_dssp HHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccccHHHHHHHHhccchhhccCCCCHHHHHHHHH
Confidence 344444433 57777643222334566666664 35677654 322211 123456788999999 9999999999
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
+++..
T Consensus 117 ~~~~~ 121 (132)
T 3crn_A 117 EKLDE 121 (132)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88764
No 366
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5
Probab=35.18 E-value=16 Score=33.91 Aligned_cols=90 Identities=13% Similarity=0.133 Sum_probs=48.2
Q ss_pred hCCCCCCcEEEEEecccc--cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHH
Q 039338 304 IGIPKNASLVLGVAGRLV--KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNA 381 (493)
Q Consensus 304 ~~i~~~~~~~i~~~Gr~~--~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~ 381 (493)
+|+ ..+ +-++.+|.+. ..++.+.+.+|++.++++.|++ .+.|.-+.+..+..-.....+.+ + .+-..
T Consensus 202 ~Gi-~Pr-VAlLs~~~~G~e~~~~~~~i~~A~~llk~~~~~~--~v~Gpl~~D~a~~~~~~~~k~~~----s---~~~G~ 270 (337)
T 1r5j_A 202 FDI-DPK-IAMLSFSTKGSGKAPQVDKVREATEIATGLNPDL--ALDGELQFDAAFVPETAAIKAPD----S---AVAGQ 270 (337)
T ss_dssp TTC-CCC-EEEECSCSTTSSCSHHHHHHHHHHHHHHHHCTTS--CEEEEECHHHHHCHHHHHHHSCS----C---SSTTC
T ss_pred cCC-CCe-EEEEecCccCCCCCCCcHHHHHHHHHHhccCCCc--EEEecCcHHHhcCHHHHHhhCCC----C---ccCCC
Confidence 777 333 6666664443 3566777899999998765543 45564332222111000000000 0 01246
Q ss_pred cCEEEeCCCCCCCCChHHHHHHH
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMM 404 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~ 404 (493)
+|++|+|.....+.++++++.+.
T Consensus 271 aDvlv~p~~d~GnI~~K~l~~~~ 293 (337)
T 1r5j_A 271 ANTFVFPDLQSGNIGYKIAQRLG 293 (337)
T ss_dssp CCEEECSSHHHHHHHHHHHHHTT
T ss_pred CCEEEECChHHHHHHHHHHHHhc
Confidence 79999998654456667777554
No 367
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=35.15 E-value=62 Score=28.03 Aligned_cols=40 Identities=15% Similarity=0.283 Sum_probs=29.8
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||+.|+.. ...-|-...+.+|+.+|+++|+.|.++-...
T Consensus 2 ~~vi~v~s~----kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG----KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS----STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC----CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 355555541 2444667788999999999999999998765
No 368
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=35.13 E-value=1.4e+02 Score=24.70 Aligned_cols=65 Identities=12% Similarity=0.074 Sum_probs=40.2
Q ss_pred cCEEEeCCCCCCCCChHHHHHHH-------cCCcEEecCCCC-Ccc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMM-------SGKPVMASRFPS-IKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~-------~G~PvI~s~~~~-~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++|+-..-++.-|..+++.+. ..+|||..-... ..+ +.+..+..+++..| + +|.++|.+++..
T Consensus 120 ~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~--~L~~~i~~~l~~ 196 (206)
T 3mm4_A 120 FDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLN--QLANVIREIESK 196 (206)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCT--THHHHHHHHC--
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHH--HHHHHHHHHHhh
Confidence 58877643223445677777765 457877643222 211 23456778899998 7 899999888765
No 369
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=35.07 E-value=58 Score=26.94 Aligned_cols=42 Identities=5% Similarity=-0.009 Sum_probs=29.3
Q ss_pred eEEEEEeccCCCCCC--CCchHHHHHHHHHHHHhCC--CEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTT--PGGMERHAHTLHVALARRG--HRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~--~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~ 129 (493)
|||++|..+ | . .|-....+..+++.+.+.| ++|.++......
T Consensus 2 mkilii~~S-~---~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~~ 47 (201)
T 1t5b_A 2 SKVLVLKSS-I---LAGYSQSGQLTDYFIEQWREKHVADEITVRDLAANP 47 (201)
T ss_dssp CEEEEEECC-S---SGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTTSC
T ss_pred CeEEEEEeC-C---CCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCC
Confidence 689999874 1 3 2444555666788888876 999998876544
No 370
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=35.03 E-value=58 Score=27.36 Aligned_cols=39 Identities=26% Similarity=0.204 Sum_probs=28.6
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
|.|++.+.. ..-|-...+.+|+..|+++| .|.++-.+..
T Consensus 1 kvI~v~s~K-----GGvGKTT~a~~LA~~la~~g-~VlliD~D~q 39 (209)
T 3cwq_A 1 MIITVASFK-----GGVGKTTTAVHLSAYLALQG-ETLLIDGDPN 39 (209)
T ss_dssp CEEEEEESS-----TTSSHHHHHHHHHHHHHTTS-CEEEEEECTT
T ss_pred CEEEEEcCC-----CCCcHHHHHHHHHHHHHhcC-CEEEEECCCC
Confidence 456666642 44566777889999999999 9998876543
No 371
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=34.97 E-value=39 Score=30.84 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=23.0
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
|||++.. ..|+.+. .+++.|.++||+|.++..
T Consensus 1 m~vlVTG-------atG~iG~---~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 1 MRVLVTG-------GSGYIGS---HTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEC-------CCCHHHH---HHHHHHHHCCCEEEEEec
Confidence 6666553 3466665 488899999999998764
No 372
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=34.97 E-value=41 Score=30.35 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=25.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.+.|||++|.. |-++ ..++..|.+.||+|+++...
T Consensus 5 ~~~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 5 GTDFHVGIVGL--------GSMG---MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp --CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECC--------CHHH---HHHHHHHHHCCCeEEEEECC
Confidence 34689999953 4444 45888999999999988543
No 373
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=34.97 E-value=45 Score=31.19 Aligned_cols=81 Identities=9% Similarity=-0.043 Sum_probs=51.3
Q ss_pred HHHHHHHHcCEEEe--CCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC--CHHHHHHHHHHHHHcC
Q 039338 374 ELRAFYNAIDIFVN--PTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP--NVESLHKTLEAAVSEG 449 (493)
Q Consensus 374 ~~~~~~~~adv~v~--ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~--d~~~l~~~i~~ll~~~ 449 (493)
+..++++...+.+. .|...+=.-=++.+|+.+|+..|....+... +++ ....-+-+.. ++++|++-|..|.+|
T Consensus 224 ~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~~~~-~~~-Pp~SfI~~~dF~s~~~La~yL~~L~~n- 300 (371)
T 2nzw_A 224 NKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVA-KDF-NPKSFVNVHDFKNFDEAIDYIKYLHTH- 300 (371)
T ss_dssp CHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGG-GTS-CGGGSEEGGGSSSHHHHHHHHHHHHTC-
T ss_pred cHHHHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCCchh-hhC-CCCceEEcccCCCHHHHHHHHHHHhcC-
Confidence 45566777777665 2222122344788999999866666555554 444 3333334444 899999999999988
Q ss_pred cHHHHHHH
Q 039338 450 PMRLAQRG 457 (493)
Q Consensus 450 ~~~~~~~~ 457 (493)
++.+.+.-
T Consensus 301 ~~~Y~~y~ 308 (371)
T 2nzw_A 301 KNAYLDML 308 (371)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76665543
No 374
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=34.86 E-value=51 Score=27.63 Aligned_cols=39 Identities=13% Similarity=0.081 Sum_probs=27.7
Q ss_pred eEEEEEeccCCCCCCC--Cch-HHHHHHHHHHHHhCC--CEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTP--GGM-ERHAHTLHVALARRG--HRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~--gG~-~~~~~~l~~~L~~~G--~~V~v~~~~ 126 (493)
|||++|..+- .. +|. ...+..+++.+.+.| ++|.++...
T Consensus 2 ~kilii~gS~----r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL~ 45 (208)
T 2hpv_A 2 SKLLVVKAHP----LTKEESRSVRALETFLASYRETNPSDEIEILDVY 45 (208)
T ss_dssp CEEEEEECCS----SCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT
T ss_pred CeEEEEEecC----CCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeCC
Confidence 6899998752 32 444 444556788888877 999998765
No 375
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=34.85 E-value=1.9e+02 Score=23.88 Aligned_cols=75 Identities=13% Similarity=0.094 Sum_probs=46.9
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++....+.. .|++++-..-++.-|..+++.+. ..+|||........ .+.+..|..|++..| +.+++..+|.
T Consensus 36 ~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~ 115 (225)
T 1kgs_A 36 EEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVR 115 (225)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHhCCccEEEeCCCCHHHHHHHHH
Confidence 444444433 57777633223444667777765 35787764322211 134556788999999 9999999999
Q ss_pred HHHH
Q 039338 444 AAVS 447 (493)
Q Consensus 444 ~ll~ 447 (493)
.++.
T Consensus 116 ~~~~ 119 (225)
T 1kgs_A 116 ALIR 119 (225)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8875
No 376
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=34.81 E-value=47 Score=28.84 Aligned_cols=36 Identities=39% Similarity=0.372 Sum_probs=25.3
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
....|||++|.. |.++ ..+++.|.+.||+|.++...
T Consensus 16 ~~~~~kIgiIG~--------G~mG---~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 16 YFQGMKIAVLGT--------GTVG---RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp ---CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCeEEEECC--------CHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 455789999953 4444 45789999999999988654
No 377
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=34.65 E-value=1.9e+02 Score=25.18 Aligned_cols=92 Identities=17% Similarity=0.260 Sum_probs=59.4
Q ss_pred EEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCC-------CcHH---HHhhhcCcEEEecC--CCHHHHHHHHH
Q 039338 313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSG-------PWEQ---RYKDFGHQVLVMGS--MSPAELRAFYN 380 (493)
Q Consensus 313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g-------~~~~---~~~~l~~~V~~~g~--~~~~~~~~~~~ 380 (493)
.|+|+|-+.-.-|...+...++++++++ | ++++..+ -... .+.+++-.+.-+|. .++.++.+++.
T Consensus 2 ~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d--~vi~ngen~~~G~g~~~~~~~~l~~~G~D~~T~GNHefD~~~l~~~l~ 78 (252)
T 2z06_A 2 RVLFIGDVMAEPGLRAVGLHLPDIRDRY-D--LVIANGENAARGKGLDRRSYRLLREAGVDLVSLGNHAWDHKEVYALLE 78 (252)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHGGGC-S--EEEEECTTTTTTSSCCHHHHHHHHHHTCCEEECCTTTTSCTTHHHHHH
T ss_pred EEEEEEecCCcccHHHHHHHHHHHHhhC-C--EEEEeCCCccCCCCcCHHHHHHHHhCCCCEEEeccEeeECchHHHHhc
Confidence 4779999887888999999999999887 5 4444321 1222 33445556656664 25568999999
Q ss_pred HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCC
Q 039338 381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI 417 (493)
Q Consensus 381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~ 417 (493)
..+ .+.|...+++.+ |+|......+|.
T Consensus 79 ~~~-~vrpaN~~~~~p---------g~~~~i~~~~G~ 105 (252)
T 2z06_A 79 SEP-VVRPLNYPPGTP---------GKGFWRLEVGGE 105 (252)
T ss_dssp HSS-EECCTTSCSSCS---------SCSEEEEEETTE
T ss_pred cCC-ceEeecCCCCCC---------CCCeEEEEECCE
Confidence 999 777764333322 566555554554
No 378
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=34.63 E-value=68 Score=27.29 Aligned_cols=40 Identities=23% Similarity=0.283 Sum_probs=29.3
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
|+..|+.. ...-|-...+.+|+..|+++|+.|.++-....
T Consensus 3 ~~i~v~s~----kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 3 RIISIVSG----KGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp EEEEEECS----STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEecC----CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 55555541 24456677789999999999999999976553
No 379
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=34.63 E-value=43 Score=31.23 Aligned_cols=27 Identities=22% Similarity=0.153 Sum_probs=20.3
Q ss_pred CCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 98 TPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
..|+++. .+++.|.++|++|.++....
T Consensus 36 atG~IG~---~l~~~L~~~g~~V~~~~r~~ 62 (381)
T 1n7h_A 36 ITGQDGS---YLTEFLLGKGYEVHGLIRRS 62 (381)
T ss_dssp TTSHHHH---HHHHHHHHTTCEEEEEECCC
T ss_pred CCchHHH---HHHHHHHHCCCEEEEEecCC
Confidence 3466554 48889999999999987654
No 380
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=34.56 E-value=48 Score=24.44 Aligned_cols=33 Identities=27% Similarity=0.309 Sum_probs=21.9
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEE
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIF 123 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~ 123 (493)
|.++||+++... ......+...|.+.|++|...
T Consensus 3 mm~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~ 35 (127)
T 2gkg_A 3 HMSKKILIVESD----------TALSATLRSALEGRGFTVDET 35 (127)
T ss_dssp ---CEEEEECSC----------HHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCeEEEEeCC----------HHHHHHHHHHHHhcCceEEEe
Confidence 345789999763 334566778888889988644
No 381
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=34.56 E-value=82 Score=28.12 Aligned_cols=107 Identities=10% Similarity=0.127 Sum_probs=54.7
Q ss_pred HHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeee------------------Ccce-----EE
Q 039338 374 ELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD------------------DEFG-----FM 430 (493)
Q Consensus 374 ~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~------------------~~~G-----~~ 430 (493)
.-..-++.||++|.-....|++-..+++++.....+++....++. -+-.. ...| +.
T Consensus 41 ~d~~~l~~Adlvv~~G~~~E~w~~~~~~~~~~~~~~~v~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~dPH~W 119 (284)
T 2prs_A 41 SDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQLEDVK-PLLMKSIHGDDDDHDHAEKSDEDHHHGDFNMHLW 119 (284)
T ss_dssp THHHHHHHCSEEEECCTTTCGGGHHHHHTSCGGGEEEGGGCTTTG-GGCCC---------------------CCCCCCGG
T ss_pred HHHHHHHcCCEEEEcCCCcHHHHHHHHHhcCCCCcEEEecCCCcc-cccccccccccccccccccccccCCCCCCCCccc
Confidence 334678999999986654477767777765433334444333332 11000 0112 23
Q ss_pred ECC-CHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 039338 431 FAP-NVESLHKTLEAAVSE-GPMRLAQRGEACRQYAASMFTANKMALAYERLFLCI 484 (493)
Q Consensus 431 ~~~-d~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i 484 (493)
.++ +...+++.|.+.|.. .|+......+++.++..+ ++.+-.++.+.+..+
T Consensus 120 ldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~---L~~Ld~~~~~~l~~~ 172 (284)
T 2prs_A 120 LSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQ---LASTETQVGNELAPL 172 (284)
T ss_dssp GCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH---HHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH---HHHHHHHHHHHHhcC
Confidence 333 445556666555441 266666666666665543 244444444444443
No 382
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=34.46 E-value=33 Score=31.98 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=25.8
Q ss_pred CCCce-EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 80 SKFTL-KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 80 ~~~~m-kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.+..| ||++|.. |.++. .++..|.+.||+|+++...
T Consensus 11 ~~m~M~kI~iIG~--------G~mG~---~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 11 ELLYLNKAVVFGS--------GAFGT---ALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp CCCCEEEEEEECC--------SHHHH---HHHHHHTTTEEEEEEECSC
T ss_pred HhhccCeEEEECC--------CHHHH---HHHHHHHhCCCEEEEEECC
Confidence 34457 9999953 54443 4788888999999988654
No 383
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=34.40 E-value=47 Score=28.62 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=24.2
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|.++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 3 k~vlItG------asggiG~---~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 3 RVAIVTG------ASSGNGL---AIATRFLARGDRVAALDLS 35 (250)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC------CCchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4666664 4467665 4889999999999888654
No 384
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=34.39 E-value=55 Score=28.52 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=25.8
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|+++|+. ..||.++. +++.|.++|++|.+.....
T Consensus 21 ~k~vlVTG------as~gIG~a---ia~~l~~~G~~V~~~~r~~ 55 (253)
T 2nm0_A 21 SRSVLVTG------GNRGIGLA---IARAFADAGDKVAITYRSG 55 (253)
T ss_dssp CCEEEEET------TTSHHHHH---HHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEeC------CCCHHHHH---HHHHHHHCCCEEEEEeCCh
Confidence 35677774 45776654 8899999999998887543
No 385
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=34.29 E-value=58 Score=27.92 Aligned_cols=26 Identities=27% Similarity=0.293 Sum_probs=20.1
Q ss_pred CCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 98 TPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
..||.++. +++.|.++|++|.++...
T Consensus 15 asggiG~~---~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 15 AGKGIGRD---TVKALHASGAKVVAVTRT 40 (244)
T ss_dssp TTSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CCchHHHH---HHHHHHHCCCEEEEEeCC
Confidence 44676654 889999999999887654
No 386
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=34.25 E-value=51 Score=30.86 Aligned_cols=35 Identities=26% Similarity=0.295 Sum_probs=24.7
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHH-hCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALA-RRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~-~~G~~V~v~~~~~ 127 (493)
.|+|++.. ..|+.+. .+++.|. ++||+|+++....
T Consensus 2 ~m~vlVTG-------atG~iG~---~l~~~L~~~~g~~V~~~~r~~ 37 (397)
T 1gy8_A 2 HMRVLVCG-------GAGYIGS---HFVRALLRDTNHSVVIVDSLV 37 (397)
T ss_dssp CCEEEEET-------TTSHHHH---HHHHHHHHHCCCEEEEEECCT
T ss_pred CCEEEEEC-------CCCHHHH---HHHHHHHHhCCCEEEEEecCC
Confidence 47776653 3466654 4788888 9999999987543
No 387
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=34.23 E-value=42 Score=30.59 Aligned_cols=26 Identities=19% Similarity=0.111 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 103 ERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 103 ~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
++.-..+++++.++|++|++++....
T Consensus 65 GkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred cHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 34456689999999999999987654
No 388
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=34.23 E-value=76 Score=28.43 Aligned_cols=106 Identities=15% Similarity=0.106 Sum_probs=54.5
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE 157 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (493)
..++|||+++... .| ..+..|..+.... ..+|.++.+.... ..... ...+.+...+....
T Consensus 87 ~~~~~ri~vl~Sg-------~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~--~~~~A-------~~~gIp~~~~~~~~ 148 (286)
T 3n0v_A 87 PNHRPKVVIMVSK-------AD--HCLNDLLYRQRIGQLGMDVVAVVSNHPD--LEPLA-------HWHKIPYYHFALDP 148 (286)
T ss_dssp TTCCCEEEEEESS-------CC--HHHHHHHHHHHTTSSCCEEEEEEESSST--THHHH-------HHTTCCEEECCCBT
T ss_pred CCCCcEEEEEEeC-------CC--CCHHHHHHHHHCCCCCcEEEEEEeCcHH--HHHHH-------HHcCCCEEEeCCCc
Confidence 4557899998751 23 3466676665543 4687777766544 11111 11233322221111
Q ss_pred CCccccccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 158 ADKWRYSKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
......-..+.+.+++.+||+|++.++. ++..+....+.-++.+|.
T Consensus 149 ---~~r~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 196 (286)
T 3n0v_A 149 ---KDKPGQERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAINIHH 196 (286)
T ss_dssp ---TBHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEEecc
Confidence 0111112356666777899999987652 333333333335677775
No 389
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=34.08 E-value=40 Score=26.79 Aligned_cols=34 Identities=26% Similarity=0.170 Sum_probs=25.5
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
|||++-+.+ +|.+. =..+.+.|.++||+|.=+.+
T Consensus 2 MkIaigsDh-------aG~~l-K~~i~~~L~~~G~eV~D~G~ 35 (149)
T 2vvr_A 2 KKIAFGCDH-------VGFIL-KHEIVAHLVERGVEVIDKGT 35 (149)
T ss_dssp CEEEEEECT-------TGGGG-HHHHHHHHHHTTCEEEECCC
T ss_pred cEEEEEeCc-------hhHHH-HHHHHHHHHHCCCEEEEeCC
Confidence 899888753 56553 34588899999999887754
No 390
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=34.04 E-value=48 Score=29.76 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=26.6
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
-|+++|+. ..+|++. .+++.|+++|++|.++....
T Consensus 28 gk~~lVTG------as~GIG~---aia~~la~~G~~V~~~~~~~ 62 (299)
T 3t7c_A 28 GKVAFITG------AARGQGR---SHAITLAREGADIIAIDVCK 62 (299)
T ss_dssp TCEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEECCS
T ss_pred CCEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeccc
Confidence 36888885 4567665 48899999999999887553
No 391
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=34.03 E-value=45 Score=31.02 Aligned_cols=28 Identities=21% Similarity=0.159 Sum_probs=20.8
Q ss_pred CCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 98 TPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
..|+.+. .+++.|.++|++|.++.....
T Consensus 32 atG~iG~---~l~~~L~~~g~~V~~~~r~~~ 59 (375)
T 1t2a_A 32 ITGQDGS---YLAEFLLEKGYEVHGIVRRSS 59 (375)
T ss_dssp TTSHHHH---HHHHHHHHTTCEEEEEECCCS
T ss_pred CCchHHH---HHHHHHHHCCCEEEEEECCcc
Confidence 3466554 488899999999999876543
No 392
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=33.94 E-value=41 Score=28.10 Aligned_cols=34 Identities=9% Similarity=0.019 Sum_probs=23.8
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCC--EEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH--RVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~ 126 (493)
.|||++.. ..|+.+. .+++.|.++|+ +|.+++..
T Consensus 5 ~~~vlVtG-------atG~iG~---~l~~~l~~~g~~~~V~~~~r~ 40 (215)
T 2a35_A 5 PKRVLLAG-------ATGLTGE---HLLDRILSEPTLAKVIAPARK 40 (215)
T ss_dssp CCEEEEEC-------TTSHHHH---HHHHHHHHCTTCCEEECCBSS
T ss_pred CceEEEEC-------CCcHHHH---HHHHHHHhCCCCCeEEEEeCC
Confidence 46777664 3366554 48889999998 88877654
No 393
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=33.85 E-value=1.4e+02 Score=21.94 Aligned_cols=76 Identities=13% Similarity=0.182 Sum_probs=41.6
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCcc---ceeeeCcceEEECC--CHHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIKG---TIVVDDEFGFMFAP--NVESLHKTL 442 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~~---e~v~~~~~G~~~~~--d~~~l~~~i 442 (493)
++..+.+.. .|++++-..-++.-|..+++.+.. .+|+|........+ +....|..+++..| +.+.+.+++
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~l~~~i 120 (130)
T 3eod_A 41 VDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMV 120 (130)
T ss_dssp HHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHHHHHHH
Confidence 444444433 477776432234446677776654 46776543222221 23456778899888 689999999
Q ss_pred HHHHHc
Q 039338 443 EAAVSE 448 (493)
Q Consensus 443 ~~ll~~ 448 (493)
.+++..
T Consensus 121 ~~~l~~ 126 (130)
T 3eod_A 121 FACLYP 126 (130)
T ss_dssp HHHHC-
T ss_pred HHHhch
Confidence 988764
No 394
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=33.82 E-value=67 Score=27.76 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=25.2
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|+++|+. ..||.++. +++.|.++|++|.++....
T Consensus 16 k~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~~r~~ 49 (247)
T 1uzm_A 16 RSVLVTG------GNRGIGLA---IAQRLAADGHKVAVTHRGS 49 (247)
T ss_dssp CEEEETT------TTSHHHHH---HHHHHHHTTCEEEEEESSS
T ss_pred CEEEEeC------CCCHHHHH---HHHHHHHCCCEEEEEeCCh
Confidence 5667764 45676654 8899999999999887543
No 395
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=33.74 E-value=31 Score=31.85 Aligned_cols=90 Identities=16% Similarity=0.127 Sum_probs=50.7
Q ss_pred cEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcC--cE-EEecCCCHHHHHHHHHH--cCEE
Q 039338 311 SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGH--QV-LVMGSMSPAELRAFYNA--IDIF 385 (493)
Q Consensus 311 ~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~--~V-~~~g~~~~~~~~~~~~~--adv~ 385 (493)
.+.++.+|-=. -|....+.+++.. ++++++-+.+. ..+..+++++ .+ .. + +++.++++. .|++
T Consensus 23 mirigiIG~G~--ig~~~~~~~~~~~----~~~~lvav~d~-~~~~a~~~a~~~g~~~~--y---~d~~ell~~~~iDaV 90 (350)
T 4had_A 23 MLRFGIISTAK--IGRDNVVPAIQDA----ENCVVTAIASR-DLTRAREMADRFSVPHA--F---GSYEEMLASDVIDAV 90 (350)
T ss_dssp CEEEEEESCCH--HHHHTHHHHHHHC----SSEEEEEEECS-SHHHHHHHHHHHTCSEE--E---SSHHHHHHCSSCSEE
T ss_pred ccEEEEEcChH--HHHHHHHHHHHhC----CCeEEEEEECC-CHHHHHHHHHHcCCCee--e---CCHHHHhcCCCCCEE
Confidence 37888888421 1122234555444 78888766653 3333333331 11 11 1 356666765 6888
Q ss_pred EeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338 386 VNPTLRPQGLDLTLMEAMMSGKPVMASR 413 (493)
Q Consensus 386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~ 413 (493)
+..+.. ..-.-.+.+|+..|++|++=+
T Consensus 91 ~I~tP~-~~H~~~~~~al~aGkhVl~EK 117 (350)
T 4had_A 91 YIPLPT-SQHIEWSIKAADAGKHVVCEK 117 (350)
T ss_dssp EECSCG-GGHHHHHHHHHHTTCEEEECS
T ss_pred EEeCCC-chhHHHHHHHHhcCCEEEEeC
Confidence 886632 222235788999999999864
No 396
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=33.74 E-value=40 Score=31.43 Aligned_cols=35 Identities=17% Similarity=0.328 Sum_probs=25.3
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
++.|||++|.. |-+ -..++..|.+.||+|.++...
T Consensus 20 m~~mkIgiIGl--------G~m---G~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGL--------GRM---GADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECc--------hHH---HHHHHHHHHhCCCEEEEEeCC
Confidence 45689999953 433 345889999999999988654
No 397
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=33.69 E-value=2.3e+02 Score=24.34 Aligned_cols=67 Identities=15% Similarity=0.177 Sum_probs=42.0
Q ss_pred cCEEEeCCCCCCCCChHHHHHHH---cCCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMM---SGKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+. ..+|||+.-.....+ +....|..+++..| +.++|.++|.+++..
T Consensus 174 ~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~~ 247 (254)
T 2ayx_A 174 IDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAER 247 (254)
T ss_dssp CSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEEESSTTSHHHHHHHHCCCEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEEECCCCHHHHHHHHHcCCceEEECCCCHHHHHHHHHHHHHH
Confidence 47776532112334556666654 467887643222221 23456778999999 999999999988764
No 398
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=33.67 E-value=22 Score=32.04 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=25.4
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|||+++.. |+++. .++..|.+.|++|+++....
T Consensus 2 ~mkI~iiGa--------Ga~G~---~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGP--------GAVGT---TIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECC--------SHHHH---HHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECC--------CHHHH---HHHHHHHHCCCeEEEEEecc
Confidence 489999954 55554 46778888899999998653
No 399
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=33.64 E-value=55 Score=27.59 Aligned_cols=42 Identities=17% Similarity=0.052 Sum_probs=29.4
Q ss_pred eEEEEEeccCCCCCCC-Cch-HHHHHHHHHHHHhC--CCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTP-GGM-ERHAHTLHVALARR--GHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~-gG~-~~~~~~l~~~L~~~--G~~V~v~~~~~~~ 129 (493)
|||++|..+ | .. +|. ...+..+++.+.+. |++|.++......
T Consensus 2 mkiLii~gS-p---r~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~~~~ 47 (212)
T 3r6w_A 2 SRILAVHAS-P---RGERSQSRRLAEVFLAAYREAHPQARVARREVGRVP 47 (212)
T ss_dssp CCEEEEECC-S---CSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESSSSC
T ss_pred CEEEEEEeC-C---CCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 789999875 2 22 343 44455678888777 9999999876544
No 400
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=33.56 E-value=50 Score=28.76 Aligned_cols=35 Identities=9% Similarity=-0.067 Sum_probs=26.1
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|+++|+. ..||.++ .+++.|+++|++|.++....
T Consensus 7 ~k~vlVTG------as~GIG~---aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 7 NATVAVIG------AGDYIGA---EIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp SCEEEEEC------CSSHHHH---HHHHHHHHTTCEEEEEESSG
T ss_pred CCEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEeCCH
Confidence 35777774 4577665 58899999999998876543
No 401
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=33.52 E-value=33 Score=29.68 Aligned_cols=31 Identities=19% Similarity=0.098 Sum_probs=23.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEE
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIF 123 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~ 123 (493)
+|+++|+. ..||.++. +++.|.++|++|.++
T Consensus 1 ~k~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTH------ARHFAGPA---AVEALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESS------TTSTTHHH---HHHHHHHTTCEEEEC
T ss_pred CCEEEEEC------CCChHHHH---HHHHHHHCCCEEEEe
Confidence 35677774 45777754 889999999998886
No 402
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=33.49 E-value=48 Score=28.96 Aligned_cols=38 Identities=11% Similarity=0.054 Sum_probs=27.5
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC---CEEEEEecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG---HRVHIFTSPVD 128 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G---~~V~v~~~~~~ 128 (493)
-+||.++|+. ..||.+. .+++.|.++| ++|.++.....
T Consensus 19 ~~~k~vlITG------asggIG~---~la~~L~~~G~~~~~V~~~~r~~~ 59 (267)
T 1sny_A 19 SHMNSILITG------CNRGLGL---GLVKALLNLPQPPQHLFTTCRNRE 59 (267)
T ss_dssp -CCSEEEESC------CSSHHHH---HHHHHHHTSSSCCSEEEEEESCTT
T ss_pred CCCCEEEEEC------CCCcHHH---HHHHHHHhcCCCCcEEEEEecChh
Confidence 3567777774 4467664 5889999999 99998876543
No 403
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=33.47 E-value=38 Score=30.45 Aligned_cols=35 Identities=14% Similarity=0.253 Sum_probs=24.8
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|+|+++. ..|+.+.. +++.|.++||+|.+++...
T Consensus 4 ~~~ilVtG-------atG~iG~~---l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVG-------GTGYIGKR---IVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEES-------TTSTTHHH---HHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEc-------CCcHHHHH---HHHHHHhCCCcEEEEECCC
Confidence 36677664 33665544 7788889999999887654
No 404
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=33.42 E-value=40 Score=28.74 Aligned_cols=34 Identities=12% Similarity=0.003 Sum_probs=24.7
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
++.|||++|.. +..-..+++.|.+.|++|.++..
T Consensus 21 m~mmkI~IIG~-----------G~mG~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGA-----------GAIGSALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEEC-----------HHHHHHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECC-----------CHHHHHHHHHHHhCCCEEEEEEC
Confidence 34579999963 33445688999999999988443
No 405
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=33.36 E-value=45 Score=30.66 Aligned_cols=35 Identities=11% Similarity=0.026 Sum_probs=24.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|+|++.. ..|+.+. .+++.|.++|++|.++....
T Consensus 27 ~~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~ 61 (352)
T 1sb8_A 27 PKVWLITG-------VAGFIGS---NLLETLLKLDQKVVGLDNFA 61 (352)
T ss_dssp CCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEECCS
T ss_pred CCeEEEEC-------CCcHHHH---HHHHHHHHCCCEEEEEeCCC
Confidence 45666553 3466554 48889999999999987643
No 406
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=33.30 E-value=32 Score=30.61 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=24.9
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
+...|||++.. ..|+.+. .+++.|.++||+|.++...
T Consensus 9 ~~~~~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~ 45 (292)
T 1vl0_A 9 HHHHMKILITG-------ANGQLGR---EIQKQLKGKNVEVIPTDVQ 45 (292)
T ss_dssp ---CEEEEEES-------TTSHHHH---HHHHHHTTSSEEEEEECTT
T ss_pred ccccceEEEEC-------CCChHHH---HHHHHHHhCCCeEEeccCc
Confidence 33467888764 3355554 4888999999999987643
No 407
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=33.29 E-value=68 Score=27.26 Aligned_cols=104 Identities=11% Similarity=0.112 Sum_probs=51.1
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC--CEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRG--HRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW 161 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (493)
|||+++.. .+| .-+..|.++..+.. .+|.++.+.... .+..+.- ...+.+...+.. ..+
T Consensus 3 ~riavl~S-------g~G--snl~ali~~~~~~~l~~eI~~Visn~~~--a~v~~~A-----~~~gIp~~~~~~---~~~ 63 (211)
T 3p9x_A 3 KRVAIFAS-------GSG--TNAEAIIQSQKAGQLPCEVALLITDKPG--AKVVERV-----KVHEIPVCALDP---KTY 63 (211)
T ss_dssp CEEEEECC-------TTC--HHHHHHHHHHHTTCCSSEEEEEEESCSS--SHHHHHH-----HTTTCCEEECCG---GGS
T ss_pred CEEEEEEe-------CCc--hHHHHHHHHHHcCCCCcEEEEEEECCCC--cHHHHHH-----HHcCCCEEEeCh---hhc
Confidence 68988874 133 34777777765532 577776665433 1111110 012222222211 111
Q ss_pred ccc-cchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 162 RYS-KGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 162 ~~~-~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
... ..-..+.+.+++.+||+|++.++. ++.-+....+.-++.+|.
T Consensus 64 ~~r~~~d~~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHp 111 (211)
T 3p9x_A 64 PSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHP 111 (211)
T ss_dssp SSHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred CchhhhHHHHHHHHHhcCCCEEEEeCchhhcCHHHHhhccCCeEEECC
Confidence 111 112355666778899999987652 333222222324677775
No 408
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=33.24 E-value=48 Score=30.03 Aligned_cols=26 Identities=15% Similarity=0.120 Sum_probs=19.5
Q ss_pred CCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 99 PGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 99 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|+.+ ..+++.|.++||+|.++....
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r~~ 35 (330)
T 2c20_A 10 AGYIG---SHAVKKLVDEGLSVVVVDNLQ 35 (330)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECCS
T ss_pred CcHHH---HHHHHHHHhCCCEEEEEeCCC
Confidence 35555 458889999999999987543
No 409
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=33.19 E-value=66 Score=29.77 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=24.7
Q ss_pred CCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 98 TPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
..-|-...+.+++..|+++|+.|.++..+..
T Consensus 35 GGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 35 GGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3345566678899999999999999997753
No 410
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=33.15 E-value=44 Score=29.91 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=26.7
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
+.|+++|+. ..||++. .+++.|+++|++|.+.+...
T Consensus 11 ~~k~vlITG------as~GIG~---~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 11 KRRCAVVTG------GNKGIGF---EICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp -CCEEEESS------CSSHHHH---HHHHHHHHTTCEEEEEESCH
T ss_pred CCcEEEEec------CCchHHH---HHHHHHHHCCCEEEEEeCCH
Confidence 346788875 5577775 48899999999998887543
No 411
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=33.14 E-value=59 Score=27.87 Aligned_cols=26 Identities=8% Similarity=0.026 Sum_probs=19.7
Q ss_pred CCCchHHHHHHHHHHHHhC--CCEEEEEecC
Q 039338 98 TPGGMERHAHTLHVALARR--GHRVHIFTSP 126 (493)
Q Consensus 98 ~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~ 126 (493)
..||.+. .+++.|.++ |++|.++...
T Consensus 12 asG~iG~---~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 12 ASGRTGQ---IVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp TTSHHHH---HHHHHHHHTTTTCEEEEEESC
T ss_pred CCcHHHH---HHHHHHHhcCCCcEEEEEEcC
Confidence 3466665 488899998 8999998764
No 412
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=32.99 E-value=64 Score=28.78 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=23.9
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|.++|+. ..||.+. .+++.|.++|++|.++...
T Consensus 27 k~vlITG------asggiG~---~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 27 KVAFITG------GGTGLGK---GMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4556663 4467665 4889999999999887654
No 413
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=32.97 E-value=52 Score=30.28 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=31.0
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.++|++++.. ..-|-...+.+++..|++.|..|.++..+.
T Consensus 15 ~~~i~~~sgk-----GGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 15 SLRWIFVGGK-----GGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp TCCEEEEECS-----TTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CeEEEEEeCC-----CCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4678887752 344556678889999999999999998874
No 414
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=32.91 E-value=56 Score=28.80 Aligned_cols=35 Identities=31% Similarity=0.415 Sum_probs=26.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|+++|+. ..||.++ .+++.|+++|++|.++....
T Consensus 11 ~k~vlVTG------as~gIG~---aia~~l~~~G~~V~~~~r~~ 45 (271)
T 3tzq_B 11 NKVAIITG------ACGGIGL---ETSRVLARAGARVVLADLPE 45 (271)
T ss_dssp TCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEcCCH
Confidence 36778875 4577665 48899999999998876543
No 415
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=32.88 E-value=59 Score=29.12 Aligned_cols=101 Identities=10% Similarity=0.038 Sum_probs=58.5
Q ss_pred cCcEEEecC-CCHH--HHHHHHHHcCEEEe--CCCCCCCCChHHHHHHHcCCcEEecCCCCCccce-eeeCcceEEECCC
Q 039338 361 GHQVLVMGS-MSPA--ELRAFYNAIDIFVN--PTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTI-VVDDEFGFMFAPN 434 (493)
Q Consensus 361 ~~~V~~~g~-~~~~--~~~~~~~~adv~v~--ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~-v~~~~~G~~~~~d 434 (493)
.++|.|.|. +|.+ +..+.+..||++|. +|+.-.++. .+.++...|.|+|.-+..... .. ..+...-+.+..+
T Consensus 174 rP~IV~FGE~lp~~~~~~~~~~~~aDlllviGTSl~V~Paa-~l~~~~~~~~~~v~IN~~~~~-~~~~~~~~~d~~~~g~ 251 (285)
T 3glr_A 174 KPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEPFA-SLTEAVRSSVPRLLINRDLVG-PLAWHPRSRDVAQLGD 251 (285)
T ss_dssp EEEECCTTSBCCGGGGGHHHHHHHCSEEEEESCCCCEETTG-GGGGSSCTTSCEEEEESSCCT-HHHHSCCTTEEEEESC
T ss_pred CCcEEEeCCcCCHHHHHHHHHHhcCCEEEEeCCCCccccHH-HHHHHHhCCCcEEEECCCCcC-ccccCCCCccEEEcCC
Confidence 367777776 3432 23456789999876 343222322 233556667888776643332 11 0112233344447
Q ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Q 039338 435 VESLHKTLEAAVSEGPMRLAQRGEACRQYA 464 (493)
Q Consensus 435 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 464 (493)
.++....|.+.+.- .++++++.++..+.+
T Consensus 252 ~~~~~~~L~~~lgw-~~el~~~~~~~~~~~ 280 (285)
T 3glr_A 252 VVHGVESLVELLGW-TEEMRDLVQRETGKL 280 (285)
T ss_dssp HHHHHHHHHHHHTC-HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCC-HHHHHHHHHhhHhhh
Confidence 78888888888876 677777777665543
No 416
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=32.80 E-value=55 Score=27.57 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=23.3
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
...|||+++.. |.++ ..++..|.+.|++|.++..
T Consensus 17 ~~~~~I~iiG~--------G~mG---~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 17 FQGMEITIFGK--------GNMG---QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp ---CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECT
T ss_pred cCCCEEEEECC--------CHHH---HHHHHHHHHCCCEEEEEcC
Confidence 34689999853 4433 4578889999999988753
No 417
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=32.76 E-value=1.4e+02 Score=21.67 Aligned_cols=76 Identities=7% Similarity=0.102 Sum_probs=45.3
Q ss_pred HHHHHHHH--HcCEEEeCCCCCCCCChHHHHHHH---cCCcEEec-CCCCCc--cceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYN--AIDIFVNPTLRPQGLDLTLMEAMM---SGKPVMAS-RFPSIK--GTIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~--~adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s-~~~~~~--~e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++....+. ..|++++-..-++.-|..+++.+. ...|+|.. ...... .+....|..+++..| +.+++..++.
T Consensus 37 ~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~ 116 (124)
T 1srr_A 37 LQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVK 116 (124)
T ss_dssp HHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhccCCCCHHHHHHHHH
Confidence 44444443 368877633222334566666664 36777654 322211 123445778999999 9999999998
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
+++..
T Consensus 117 ~~~~~ 121 (124)
T 1srr_A 117 KYLPL 121 (124)
T ss_dssp HHSCC
T ss_pred HHhcc
Confidence 87643
No 418
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=32.74 E-value=47 Score=31.82 Aligned_cols=80 Identities=13% Similarity=0.148 Sum_probs=48.0
Q ss_pred EEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChH--HHHHHH---------cCCcEEecCC---CCCcccee-------e
Q 039338 365 LVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLT--LMEAMM---------SGKPVMASRF---PSIKGTIV-------V 423 (493)
Q Consensus 365 ~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~--~~EAm~---------~G~PvI~s~~---~~~~~e~v-------~ 423 (493)
+..+.+ .+....++..||.+|.- +.|+|+- ++|++. .++|||..+. .+.-+.++ .
T Consensus 230 Iiv~~m-~eRK~~mv~~SDAfIaL---PGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~~l~~~l~ 305 (460)
T 3bq9_A 230 VILPDI-EKRLEAFVRCAHGIVIF---PGGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALDEFIGATIG 305 (460)
T ss_dssp EECSSH-HHHHHHHHHHCSEEEEC---SCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHTC
T ss_pred EEECCH-HHHHHHHHHhCCEEEEc---CCCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHHHHHHHHhc
Confidence 344444 34556678889998862 4677754 677777 4889999862 22211111 1
Q ss_pred -eCcce-EEECCCHHHHHHHHHHHHHc
Q 039338 424 -DDEFG-FMFAPNVESLHKTLEAAVSE 448 (493)
Q Consensus 424 -~~~~G-~~~~~d~~~l~~~i~~ll~~ 448 (493)
..... +.+..|++++.+.+.+.+..
T Consensus 306 ~~~~~~~iiv~ddpeEal~~l~~~~~~ 332 (460)
T 3bq9_A 306 DEARQLYKIIIDDPAAVAQHMHAGMAA 332 (460)
T ss_dssp TTGGGGCEEEESCHHHHHHHHHHHHHH
T ss_pred chhhcCcEEEeCCHHHHHHHHHHHHHH
Confidence 11122 23444999999999887765
No 419
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.73 E-value=46 Score=28.43 Aligned_cols=26 Identities=31% Similarity=0.462 Sum_probs=19.9
Q ss_pred CCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 98 TPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
..||.+. .+++.|.++|++|.++...
T Consensus 10 asggiG~---~la~~l~~~G~~V~~~~r~ 35 (242)
T 1uay_A 10 GASGLGR---AAALALKARGYRVVVLDLR 35 (242)
T ss_dssp TTSHHHH---HHHHHHHHHTCEEEEEESS
T ss_pred CCChHHH---HHHHHHHHCCCEEEEEccC
Confidence 4467665 4888999999999988654
No 420
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.71 E-value=55 Score=28.48 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=24.4
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 7 k~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTG------GARGIGRA---IAQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEET------TTSHHHHH---HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC------CCCHHHHH---HHHHHHHCCCEEEEEeCC
Confidence 4666764 45777654 889999999999887643
No 421
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=32.70 E-value=36 Score=29.46 Aligned_cols=33 Identities=18% Similarity=0.350 Sum_probs=24.4
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
.+|||+||... ..|+ .|+..|.+.||+|..+..
T Consensus 5 ~~mkI~IIG~G-----~~G~------sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDG-----SSTV------NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCS-----CCCS------CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeC-----HHHH------HHHHHHHHCCCEEEEecC
Confidence 46999999762 3343 378888999999887654
No 422
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=32.61 E-value=59 Score=28.50 Aligned_cols=33 Identities=15% Similarity=0.290 Sum_probs=24.5
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 9 k~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 9 KVVIVTG------ASMGIGRA---IAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp CEEEEES------CSSHHHHH---HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC------CCCHHHHH---HHHHHHHCCCEEEEEecC
Confidence 4666664 45777654 889999999999887654
No 423
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=32.57 E-value=35 Score=30.87 Aligned_cols=33 Identities=36% Similarity=0.450 Sum_probs=24.0
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-----C-CEEEEEec
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR-----G-HRVHIFTS 125 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-----G-~~V~v~~~ 125 (493)
++|||+++.. |.++. .++..|.+. | |+|+++..
T Consensus 7 ~~m~I~iiG~--------G~mG~---~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGL--------GGVGG---YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECC--------SHHHH---HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECc--------CHHHH---HHHHHHHhCccccCCCCCEEEEEc
Confidence 3589999953 55553 367777777 9 99999865
No 424
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=32.50 E-value=1.5e+02 Score=21.93 Aligned_cols=76 Identities=11% Similarity=0.022 Sum_probs=46.4
Q ss_pred HHHHHHHH--HcCEEEeCCCCCCCCChHHHHHHH---cCCcEEec-CCCCCc--cceeeeCcceEEECC-CHHHHHHHHH
Q 039338 373 AELRAFYN--AIDIFVNPTLRPQGLDLTLMEAMM---SGKPVMAS-RFPSIK--GTIVVDDEFGFMFAP-NVESLHKTLE 443 (493)
Q Consensus 373 ~~~~~~~~--~adv~v~ps~~~eg~~~~~~EAm~---~G~PvI~s-~~~~~~--~e~v~~~~~G~~~~~-d~~~l~~~i~ 443 (493)
++....+. ..|++++-..-++.-|..+++.+. ...|+|.. ..+... .+....|..+++..| +.+++..++.
T Consensus 37 ~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~ 116 (136)
T 1mvo_A 37 EEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVK 116 (136)
T ss_dssp HHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHhCCCCEEEECCCCHHHHHHHHH
Confidence 34444443 357777633222334566777665 34677654 322211 123456778999999 9999999999
Q ss_pred HHHHc
Q 039338 444 AAVSE 448 (493)
Q Consensus 444 ~ll~~ 448 (493)
.++..
T Consensus 117 ~~~~~ 121 (136)
T 1mvo_A 117 AILRR 121 (136)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98876
No 425
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=32.46 E-value=59 Score=29.70 Aligned_cols=41 Identities=10% Similarity=0.118 Sum_probs=30.2
Q ss_pred ceE-EEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 83 TLK-IAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 83 ~mk-Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|| |++++. ...-|-...+.+++..|+++|..|.++..+..
T Consensus 12 gm~~i~v~sg-----KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 12 GKTTFVFIGG-----KGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp TBCEEEEEEE-----STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEEeC-----CCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 455 555543 24456667788999999999999999988763
No 426
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=32.45 E-value=72 Score=27.76 Aligned_cols=39 Identities=26% Similarity=0.323 Sum_probs=28.7
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|+..|+.. ...-|-...+.+|+..|+++|+.|.++-.+.
T Consensus 3 ~~I~v~s~----kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 3 RTITVASG----KGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp EEEEEEES----SSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECC----CCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 55555441 2445667788999999999999999987654
No 427
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=32.31 E-value=51 Score=30.68 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=24.3
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC-CEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG-HRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 127 (493)
.|+|++.. ..|+.+. .+++.|.++| ++|+++....
T Consensus 32 ~~~ilVtG-------atG~iG~---~l~~~L~~~g~~~V~~~~r~~ 67 (377)
T 2q1s_A 32 NTNVMVVG-------GAGFVGS---NLVKRLLELGVNQVHVVDNLL 67 (377)
T ss_dssp TCEEEEET-------TTSHHHH---HHHHHHHHTTCSEEEEECCCT
T ss_pred CCEEEEEC-------CccHHHH---HHHHHHHHcCCceEEEEECCC
Confidence 36666553 3355554 5888999999 9999986543
No 428
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=32.15 E-value=71 Score=27.67 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=25.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
-|+++|+. ..||.+. .+++.|+++|++|.++...
T Consensus 12 ~k~vlVTG------as~gIG~---aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 12 DRIILVTG------ASDGIGR---EAAMTYARYGATVILLGRN 45 (252)
T ss_dssp TCEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeC------CCChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 36778875 4577765 4889999999999887644
No 429
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=32.11 E-value=47 Score=30.71 Aligned_cols=35 Identities=26% Similarity=0.269 Sum_probs=24.8
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|+|++.. ..|+.+. .+++.|.++||+|.+++...
T Consensus 5 ~~~ilVtG-------atG~iG~---~l~~~L~~~g~~V~~~~R~~ 39 (352)
T 1xgk_A 5 KKTIAVVG-------ATGRQGA---SLIRVAAAVGHHVRAQVHSL 39 (352)
T ss_dssp CCCEEEES-------TTSHHHH---HHHHHHHHTTCCEEEEESCS
T ss_pred CCEEEEEC-------CCCHHHH---HHHHHHHhCCCEEEEEECCC
Confidence 46776664 3466554 47788888999999987544
No 430
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=32.11 E-value=50 Score=29.21 Aligned_cols=33 Identities=9% Similarity=0.114 Sum_probs=25.5
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 22 k~vlVTG------as~gIG~a---ia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITG------ATSGFGEA---CARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESS------TTTSSHHH---HHHHHHHTTCEEEEEESC
T ss_pred cEEEEeC------CCCHHHHH---HHHHHHHCCCEEEEEECC
Confidence 6777775 55777754 889999999999887654
No 431
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=32.00 E-value=50 Score=30.73 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=29.8
Q ss_pred eEEEEEeccCCCCCCCCch--HHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGM--ERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~--~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|||+.|+. ..||+ .+.+.+|+..|++.|..|.++-.+...
T Consensus 1 MkvIav~s------~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q~ 42 (361)
T 3pg5_A 1 MRTISFFN------NKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQC 42 (361)
T ss_dssp CEEEEBCC------SSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CeEEEEEc------CCCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCCC
Confidence 77777765 33444 455778999999999999999876544
No 432
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=31.93 E-value=1.5e+02 Score=21.69 Aligned_cols=76 Identities=11% Similarity=0.117 Sum_probs=46.7
Q ss_pred HHHHHHHHH--cCEEEeCCCCCCCCChHHHHHHHc-----CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHH
Q 039338 373 AELRAFYNA--IDIFVNPTLRPQGLDLTLMEAMMS-----GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKT 441 (493)
Q Consensus 373 ~~~~~~~~~--adv~v~ps~~~eg~~~~~~EAm~~-----G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~ 441 (493)
++....+.. .|++++-..-++.-|..+++.+.. ..|+|.....+..+ +.+..|..+++..| +.+++..+
T Consensus 41 ~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 120 (129)
T 1p6q_A 41 EQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANNVLAKPFTIEKMKAA 120 (129)
T ss_dssp HHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTCSCEECCCSSHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHH
Confidence 444455443 477776432233446677777753 56776543222211 23445778999999 99999999
Q ss_pred HHHHHHc
Q 039338 442 LEAAVSE 448 (493)
Q Consensus 442 i~~ll~~ 448 (493)
|.+++..
T Consensus 121 i~~~~~~ 127 (129)
T 1p6q_A 121 IEAVFGA 127 (129)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9887653
No 433
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=31.92 E-value=71 Score=28.75 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=32.8
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
+++|++.|+.. ...-|-...+.+|+..|++.|..|.++-.+..
T Consensus 102 ~~~kvI~vts~----kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r 144 (299)
T 3cio_A 102 TENNILMITGA----TPDSGKTFVSSTLAAVIAQSDQKVLFIDADLR 144 (299)
T ss_dssp CSCCEEEEEES----SSSSCHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCeEEEEECC----CCCCChHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 45677777762 13456777899999999999999999976653
No 434
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=31.87 E-value=79 Score=28.22 Aligned_cols=40 Identities=18% Similarity=0.225 Sum_probs=31.1
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC-CEEEEEecC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG-HRVHIFTSP 126 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~ 126 (493)
++.|||+|+.. ...........|.+.|.+.| ++|++....
T Consensus 3 ~~~kvLiv~G~-----~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLITGQ-----NNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEESC-----CSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEcCC-----CCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 47899999763 22336777788999999998 999998754
No 435
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=31.78 E-value=58 Score=28.07 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=25.2
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
+-|..+|+. ..||.++ .+++.|.++|++|.++...
T Consensus 13 ~~k~vlVTG------as~gIG~---~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 13 TGKTSLITG------ASSGIGS---AIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp TTCEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEcCC
Confidence 334666664 4577665 4889999999999887654
No 436
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=31.74 E-value=1.6e+02 Score=21.80 Aligned_cols=68 Identities=13% Similarity=0.121 Sum_probs=42.5
Q ss_pred HcCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCc---cceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 381 AIDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIK---GTIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 381 ~adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~---~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
..|++++-..-++.-|..+++.+.. ..|+|........ .+....|..+++..| +.+++.++|..++..
T Consensus 46 ~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 120 (134)
T 3f6c_A 46 KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNG 120 (134)
T ss_dssp CCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGGGCTHHHHHHHHHHHTT
T ss_pred CCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCCCCHHHHHHHHHHHHCC
Confidence 3577766432234446667766653 4566653221111 133456778999999 999999999999875
No 437
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=31.66 E-value=58 Score=27.95 Aligned_cols=33 Identities=30% Similarity=0.423 Sum_probs=24.2
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|.++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 3 k~vlVTG------as~giG~---~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTG------GSRGIGR---AIAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4566664 4567665 4889999999999887654
No 438
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=31.66 E-value=31 Score=31.91 Aligned_cols=45 Identities=11% Similarity=-0.009 Sum_probs=31.2
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.+|||+++.... +.+..-.-.....++++|.+.||+|+.+.....
T Consensus 2 ~~~~v~vl~GG~--s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~~~ 46 (346)
T 3se7_A 2 SHMKIGIIFGGV--SEEHDISVKSAREVATHLGTGVFEPFYLGITKS 46 (346)
T ss_dssp CCEEEEEEEECS--STTHHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred CCCEEEEEeeec--CCCccHHHHHHHHHHHHhcccCCEEEEEEECCC
Confidence 479999998632 112222223567788999999999999987643
No 439
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=31.64 E-value=73 Score=28.32 Aligned_cols=40 Identities=20% Similarity=0.241 Sum_probs=28.9
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|||..|+.. ...-|-...+.+|+.+|+++|..|.++-.+.
T Consensus 4 ~kvI~v~s~----KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 4 TRVIVVGNE----KGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp CEEEEECCS----SSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEcC----CCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 356555541 2445666778899999999999999987654
No 440
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=31.55 E-value=56 Score=28.90 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=27.0
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
.|+++|+. ..+|.++ .+++.|+++|++|.+......
T Consensus 33 gk~~lVTG------as~GIG~---aia~~la~~G~~V~~~~r~~~ 68 (275)
T 4imr_A 33 GRTALVTG------SSRGIGA---AIAEGLAGAGAHVILHGVKPG 68 (275)
T ss_dssp TCEEEETT------CSSHHHH---HHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEcCCHH
Confidence 36888875 4577665 488999999999988876443
No 441
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=31.55 E-value=53 Score=28.43 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=25.5
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|+++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 9 ~k~vlITG------as~giG~---~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 9 NKVGIVTG------SGGGIGQ---AYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEcCC
Confidence 35777774 4567665 5899999999999887654
No 442
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=31.52 E-value=58 Score=28.24 Aligned_cols=35 Identities=26% Similarity=0.385 Sum_probs=25.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
+-|.++|+. ..||.++ .+++.|.++|++|.+....
T Consensus 12 ~~k~vlITG------as~giG~---~ia~~l~~~G~~v~~~~~~ 46 (256)
T 3ezl_A 12 SQRIAYVTG------GMGGIGT---SICQRLHKDGFRVVAGCGP 46 (256)
T ss_dssp -CEEEEETT------TTSHHHH---HHHHHHHHTTEEEEEEECT
T ss_pred CCCEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 456777774 4577665 5889999999999887743
No 443
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=31.52 E-value=50 Score=29.35 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=25.7
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
.|+++|+. ..||.+. .+++.|+++|++|.++..
T Consensus 29 ~k~~lVTG------as~GIG~---aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTG------GRRGIGL---GIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CCEEEEec------CCCHHHH---HHHHHHHHCCCeEEEEeC
Confidence 36888885 5577765 488999999999988874
No 444
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=31.50 E-value=93 Score=26.69 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=28.8
Q ss_pred HHHHHHHHcCEEEeCCC---------CCCCCChHHHHHHHcCCcEEecC
Q 039338 374 ELRAFYNAIDIFVNPTL---------RPQGLDLTLMEAMMSGKPVMASR 413 (493)
Q Consensus 374 ~~~~~~~~adv~v~ps~---------~~eg~~~~~~EAm~~G~PvI~s~ 413 (493)
+..+.+..||.+++|.- +..++--.+-|+...|+|++.+-
T Consensus 72 d~~~~l~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~s 120 (229)
T 1fy2_A 72 DPLAAIEKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWS 120 (229)
T ss_dssp CHHHHHHHCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEET
T ss_pred cHHHHHhcCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEEC
Confidence 45578889999999861 11234456778888999999875
No 445
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=31.47 E-value=61 Score=28.54 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=26.1
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
-|.++|+. ..||+++ .+++.|+++|++|.++......
T Consensus 14 ~k~vlVTG------as~GIG~---aia~~l~~~G~~V~~~~r~~~~ 50 (269)
T 3vtz_A 14 DKVAIVTG------GSSGIGL---AVVDALVRYGAKVVSVSLDEKS 50 (269)
T ss_dssp TCEEEESS------TTSHHHH---HHHHHHHHTTCEEEEEESCC--
T ss_pred CCEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCCchh
Confidence 45677774 4577775 4889999999999888755433
No 446
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=31.47 E-value=92 Score=26.80 Aligned_cols=41 Identities=20% Similarity=0.055 Sum_probs=29.5
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
++||.+... ..-|=...+.+++..+.++|++|.++......
T Consensus 6 ~l~I~~~~k------gGvGKTt~a~~la~~l~~~G~~V~v~d~D~q~ 46 (228)
T 2r8r_A 6 RLKVFLGAA------PGVGKTYAMLQAAHAQLRQGVRVMAGVVETHG 46 (228)
T ss_dssp CEEEEEESS------TTSSHHHHHHHHHHHHHHTTCCEEEEECCCTT
T ss_pred eEEEEEECC------CCCcHHHHHHHHHHHHHHCCCCEEEEEeCCCC
Confidence 566665543 33455666789999999999999888876543
No 447
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=31.44 E-value=44 Score=30.50 Aligned_cols=25 Identities=16% Similarity=0.175 Sum_probs=19.2
Q ss_pred CCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 98 TPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
..|+.+. .+++.|.++|++|.++..
T Consensus 9 atG~iG~---~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 9 GCGFLGS---NLASFALSQGIDLIVFDN 33 (347)
T ss_dssp TTSHHHH---HHHHHHHHTTCEEEEEEC
T ss_pred CCchhHH---HHHHHHHhCCCEEEEEeC
Confidence 3466654 488899999999999865
No 448
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=31.42 E-value=60 Score=29.67 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=26.1
Q ss_pred ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|||.++. .||.+ +..+++.|.++|++|.+.-...
T Consensus 4 ~~~i~~iG--------iGg~G--ms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIG--------IGGTF--MGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEES--------CCSHH--HHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEE--------ECHHH--HHHHHHHHHhCCCEEEEEcCCC
Confidence 35788874 47766 4468899999999999976543
No 449
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=31.41 E-value=73 Score=25.28 Aligned_cols=35 Identities=29% Similarity=0.376 Sum_probs=26.5
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|||++=+++ +|.+ .=..+.+.|.++||+|.=+.+.
T Consensus 1 MkI~igsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~~ 35 (149)
T 3he8_A 1 MKIGIGSDH-------GGYN-LKREIADFLKKRGYEVIDFGTH 35 (149)
T ss_dssp CEEEEEECG-------GGHH-HHHHHHHHHHHTTCEEEECCCC
T ss_pred CEEEEEECc-------hhHH-HHHHHHHHHHHCCCEEEEcCCC
Confidence 788888763 5655 3567889999999999876654
No 450
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=31.41 E-value=52 Score=29.98 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=23.8
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~ 127 (493)
|||++.. ..|+.+. .+++.|.++ ||+|+++....
T Consensus 1 m~vlVtG-------atG~iG~---~l~~~L~~~~g~~V~~~~r~~ 35 (345)
T 2bll_A 1 MRVLILG-------VNGFIGN---HLTERLLREDHYEVYGLDIGS 35 (345)
T ss_dssp CEEEEET-------CSSHHHH---HHHHHHHHSTTCEEEEEESCC
T ss_pred CeEEEEC-------CCcHHHH---HHHHHHHHhCCCEEEEEeCCc
Confidence 5676653 3355554 488889888 89999987643
No 451
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=31.35 E-value=1.6e+02 Score=28.45 Aligned_cols=74 Identities=15% Similarity=0.136 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccccchHHHHHHhcCCCCcEE
Q 039338 103 ERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVV 182 (493)
Q Consensus 103 ~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiI 182 (493)
..+...+++.|.+.|.+|..+...... . ..+. . ....+.. .....+.+.+++.+||++
T Consensus 322 ~~~~~~l~~~L~elGm~vv~~~~~~~~--~-~~~~------~--~~~~v~~-----------~D~~~le~~i~~~~pDll 379 (458)
T 3pdi_B 322 PDLLLGFDALLRSMGAHTVAAVVPARA--A-ALVD------S--PLPSVRV-----------GDLEDLEHAARAGQAQLV 379 (458)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEESSCC--S-CCTT------T--TSSCEEE-----------SHHHHHHHHHHHHTCSEE
T ss_pred cHHHHHHHHHHHHCCCEEEEEEECCCC--h-hhhh------C--ccCcEEe-----------CCHHHHHHHHHhcCCCEE
Confidence 346889999999999999887765533 1 1111 0 0011111 122345566667789999
Q ss_pred EeCccchhHHhhhccC
Q 039338 183 HSESVALPHWLARNVT 198 (493)
Q Consensus 183 ~~~~~~~~~~~~~~~p 198 (493)
+.++..-......++|
T Consensus 380 ig~~~~~~~a~k~gip 395 (458)
T 3pdi_B 380 IGNSHALASARRLGVP 395 (458)
T ss_dssp EECTTHHHHHHHTTCC
T ss_pred EEChhHHHHHHHcCCC
Confidence 9987755555555667
No 452
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=31.35 E-value=61 Score=28.06 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=24.5
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 8 k~vlVTG------as~giG~~---ia~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 8 KNVWVTG------AGKGIGYA---TALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CEEEEES------TTSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC------CCcHHHHH---HHHHHHHCCCEEEEEeCc
Confidence 4566664 45777654 889999999999887654
No 453
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=31.34 E-value=36 Score=30.37 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=22.2
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|||++.. ..|+.+. .+++.|. +||+|+++...
T Consensus 1 m~ilVtG-------atG~iG~---~l~~~L~-~g~~V~~~~r~ 32 (299)
T 1n2s_A 1 MNILLFG-------KTGQVGW---ELQRSLA-PVGNLIALDVH 32 (299)
T ss_dssp CEEEEEC-------TTSHHHH---HHHHHTT-TTSEEEEECTT
T ss_pred CeEEEEC-------CCCHHHH---HHHHHhh-cCCeEEEeccc
Confidence 6777664 3355554 4778888 79999988643
No 454
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=31.32 E-value=59 Score=28.16 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=25.1
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|+++|+. ..||.++ .+++.|.++|++|.++....
T Consensus 8 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 8 KLAVITG------GANGIGR---AIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeC------CCcHHHH---HHHHHHHHCCCEEEEEcCCc
Confidence 4667764 4577665 48899999999998886543
No 455
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=31.20 E-value=68 Score=28.21 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=24.1
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|.++|+. ..||.+. .+++.|.++|++|.++...
T Consensus 32 k~vlITG------asggIG~---~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 32 EIVLITG------AGHGIGR---LTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEEcC
Confidence 4566664 4467665 4889999999999887654
No 456
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=31.13 E-value=60 Score=28.24 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=24.9
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|.++|+. ..||.+. .+++.|.++|++|.++....
T Consensus 13 k~vlVTG------asggiG~---~~a~~l~~~G~~V~~~~r~~ 46 (265)
T 2o23_A 13 LVAVITG------GASGLGL---ATAERLVGQGASAVLLDLPN 46 (265)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEeCCc
Confidence 4666664 4467665 48899999999999887544
No 457
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=31.12 E-value=53 Score=30.01 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=23.3
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+|++.. ..|+.+. .+++.|.++||+|.++...
T Consensus 3 ~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~ 35 (348)
T 1ek6_A 3 EKVLVTG-------GAGYIGS---HTVLELLEAGYLPVVIDNF 35 (348)
T ss_dssp SEEEEET-------TTSHHHH---HHHHHHHHTTCCEEEEECS
T ss_pred CEEEEEC-------CCCHHHH---HHHHHHHHCCCEEEEEecC
Confidence 5666553 3366554 4888899999999998653
No 458
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=31.01 E-value=56 Score=28.58 Aligned_cols=33 Identities=24% Similarity=0.205 Sum_probs=24.4
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 8 k~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 8 KVALVSG------GARGMGAS---HVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp CEEEEET------TTSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC------CCCHHHHH---HHHHHHHCCCEEEEEeCC
Confidence 4566664 45777654 889999999999887654
No 459
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=30.97 E-value=53 Score=28.63 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=24.8
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 15 k~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 15 KVALVTA------STDGIGLA---IARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp CEEEESS------CSSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHHHH---HHHHHHHCCCEEEEEeCC
Confidence 5667764 45777654 889999999999887654
No 460
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=30.91 E-value=97 Score=28.25 Aligned_cols=37 Identities=8% Similarity=0.028 Sum_probs=21.8
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|++|||++|.. ...|. ..+++.|...|+++..++...
T Consensus 2 M~~~rvgiiG~------G~~~~----~~~~~~l~~~~~~lvav~d~~ 38 (336)
T 2p2s_A 2 MKKIRFAAIGL------AHNHI----YDMCQQLIDAGAELAGVFESD 38 (336)
T ss_dssp --CCEEEEECC------SSTHH----HHHHHHHHHTTCEEEEEECSC
T ss_pred CCccEEEEECC------ChHHH----HHhhhhhcCCCcEEEEEeCCC
Confidence 56799999974 12222 234455556789987666544
No 461
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=30.76 E-value=64 Score=28.45 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=26.9
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|+++|+. ..+|.++ .+++.|+++|++|.++......
T Consensus 7 k~~lVTG------as~GIG~---aia~~la~~G~~V~~~~r~~~~ 42 (274)
T 3e03_A 7 KTLFITG------ASRGIGL---AIALRAARDGANVAIAAKSAVA 42 (274)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESCCSC
T ss_pred cEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEeccchh
Confidence 5777875 4577775 4889999999999888765443
No 462
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=30.68 E-value=58 Score=28.18 Aligned_cols=33 Identities=9% Similarity=0.242 Sum_probs=24.8
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 3 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 3 RGVIVTG------GGHGIGK---QICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 5677774 4577765 4889999999999887654
No 463
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=30.68 E-value=49 Score=29.85 Aligned_cols=33 Identities=30% Similarity=0.508 Sum_probs=23.7
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
||+++. ..|+.+.. +++.|.++||+|.+++...
T Consensus 13 ~ilVtG-------atG~iG~~---l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIFG-------GTGYIGNH---MVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEET-------TTSTTHHH---HHHHHHHTTCCEEEEECTT
T ss_pred eEEEEC-------CCchHHHH---HHHHHHHCCCcEEEEECCC
Confidence 566664 33665554 7888999999999987654
No 464
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=30.64 E-value=57 Score=28.16 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=24.4
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|.++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 12 k~vlITG------asggiG~---~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTG------AGSGIGL---EICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4666664 4467665 4889999999999888654
No 465
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=30.58 E-value=63 Score=28.48 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=25.5
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.+. .+++.|+++|++|.++...
T Consensus 14 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 14 KVAFITG------AARGQGR---AHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp CEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEC------CCChHHH---HHHHHHHHCCCeEEEEecc
Confidence 5777875 4577765 4889999999999888654
No 466
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=30.54 E-value=58 Score=28.16 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=24.8
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 8 k~~lVTG------as~gIG~a---ia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 8 KVALITG------ASSGIGEA---TARALAAEGAAVAIAARR 40 (247)
T ss_dssp CEEEEES------CSSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCCHHHHH---HHHHHHHCCCEEEEEECC
Confidence 5677774 45777754 889999999999887654
No 467
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=30.51 E-value=32 Score=28.53 Aligned_cols=41 Identities=10% Similarity=0.053 Sum_probs=22.9
Q ss_pred CceEEEEEeccCCCCCCCCchHHH-HHHHHHHHHhCCCEEEEEecCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERH-AHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~-~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.+|||++|..+- ..+|.... +..+++.+. .|++|.++....
T Consensus 5 ~~Mkilii~gS~----r~~g~t~~la~~i~~~l~-~g~~v~~~dl~~ 46 (193)
T 1rtt_A 5 DDIKVLGISGSL----RSGSYNSAALQEAIGLVP-PGMSIELADISG 46 (193)
T ss_dssp --CEEEEEESCC----STTCHHHHHHHHHHTTCC-TTCEEEECCCTT
T ss_pred CCceEEEEECCC----CCCChHHHHHHHHHHhcc-CCCeEEEEeHHH
Confidence 358999998741 33454333 233333333 588988876543
No 468
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=30.41 E-value=59 Score=28.09 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=24.4
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 6 k~vlVTG------as~giG~~---ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 6 KAVLITG------AAHGIGRA---TLELFAKEGARLVACDIE 38 (245)
T ss_dssp CEEEEES------TTSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCCHHHHH---HHHHHHHCCCEEEEEeCC
Confidence 4566664 45776654 888999999999987654
No 469
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=30.41 E-value=82 Score=27.72 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=27.4
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
+|++++.. .+.||-+ +-.++.|...|++|+|+....
T Consensus 87 ~vlVlcG~----GNNGGDG---lv~AR~L~~~G~~V~v~~~~~ 122 (259)
T 3d3k_A 87 TVALLCGP----HVKGAQG---ISCGRHLANHDVQVILFLPNF 122 (259)
T ss_dssp EEEEEECS----SHHHHHH---HHHHHHHHHTTCEEEEECCBC
T ss_pred eEEEEECC----CCCHHHH---HHHHHHHHHCCCeEEEEEecC
Confidence 79999862 3556654 458899999999999987653
No 470
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=30.36 E-value=58 Score=28.56 Aligned_cols=33 Identities=18% Similarity=0.392 Sum_probs=24.8
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 14 k~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 14 RVVLITG------GGSGLGRA---TAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp CEEEEET------TTSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCCHHHHH---HHHHHHHCCCEEEEEeCC
Confidence 5677774 45777654 889999999999887654
No 471
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=30.36 E-value=36 Score=30.26 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=25.4
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~ 129 (493)
|||++.. ..|+.+.. +++.|.+. |++|.+++.....
T Consensus 1 M~ilVtG-------atG~iG~~---l~~~L~~~~g~~V~~~~R~~~~ 37 (289)
T 3e48_A 1 MNIMLTG-------ATGHLGTH---ITNQAIANHIDHFHIGVRNVEK 37 (289)
T ss_dssp CCEEEET-------TTSHHHHH---HHHHHHHTTCTTEEEEESSGGG
T ss_pred CEEEEEc-------CCchHHHH---HHHHHhhCCCCcEEEEECCHHH
Confidence 6777764 34666655 66668887 9999999876543
No 472
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=30.19 E-value=87 Score=26.62 Aligned_cols=60 Identities=15% Similarity=0.059 Sum_probs=40.0
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK 160 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (493)
..+-||++.+.. ...+-.+ ..-++..|...||+|+-+....+.
T Consensus 90 ~~~~~vll~~v~----gd~HdiG--~~iv~~~l~~~G~~Vi~LG~~vp~------------------------------- 132 (215)
T 3ezx_A 90 EEAGLAITFVAE----GDIHDIG--HRLVTTMLGANGFQIVDLGVDVLN------------------------------- 132 (215)
T ss_dssp --CCEEEEEECT----TCCCCHH--HHHHHHHHHHTSCEEEECCSSCCH-------------------------------
T ss_pred CCCCeEEEEeCC----CChhHHH--HHHHHHHHHHCCCeEEEcCCCCCH-------------------------------
Confidence 345678887752 2333333 555777889999999877654443
Q ss_pred cccccchHHHHHHhcCCCCcEEEe
Q 039338 161 WRYSKGWEQFDEENQREPFDVVHS 184 (493)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~DiI~~ 184 (493)
..+.+...+.+||+|-+
T Consensus 133 -------e~iv~~~~~~~~d~v~l 149 (215)
T 3ezx_A 133 -------ENVVEEAAKHKGEKVLL 149 (215)
T ss_dssp -------HHHHHHHHHTTTSCEEE
T ss_pred -------HHHHHHHHHcCCCEEEE
Confidence 56666666888999877
No 473
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=30.16 E-value=51 Score=29.04 Aligned_cols=33 Identities=15% Similarity=0.414 Sum_probs=25.8
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++ .+++.|+++|++|.++...
T Consensus 17 k~vlVTG------as~gIG~---aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 17 KLVVITG------ASSGIGE---AIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp CEEEEES------TTSHHHH---HHHHHHHHTTCCEEEEESC
T ss_pred CEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEECC
Confidence 6777875 5577775 4889999999999988754
No 474
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=30.16 E-value=86 Score=27.14 Aligned_cols=45 Identities=11% Similarity=0.087 Sum_probs=29.1
Q ss_pred eEEEEEecc----CCCCCCCCchH-HHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 84 LKIAVFSRK----WPISTTPGGME-RHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 84 mkIl~v~~~----~p~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
+|||++... |.......|.+ .-+......|.+.|++|+++++...
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~ 53 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGK 53 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 479999863 32111112333 4466677888999999999997654
No 475
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=30.02 E-value=69 Score=27.80 Aligned_cols=33 Identities=18% Similarity=0.258 Sum_probs=24.1
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|.++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 15 k~vlITG------asggiG~---~~a~~l~~~G~~V~~~~r~ 47 (265)
T 1h5q_A 15 KTIIVTG------GNRGIGL---AFTRAVAAAGANVAVIYRS 47 (265)
T ss_dssp EEEEEET------TTSHHHH---HHHHHHHHTTEEEEEEESS
T ss_pred CEEEEEC------CCchHHH---HHHHHHHHCCCeEEEEeCc
Confidence 4556663 4467665 4889999999999888754
No 476
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=29.90 E-value=62 Score=24.75 Aligned_cols=68 Identities=15% Similarity=0.161 Sum_probs=41.2
Q ss_pred HcCEEEeCCCCCCCCChHHHHHHHc---CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 381 AIDIFVNPTLRPQGLDLTLMEAMMS---GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 381 ~adv~v~ps~~~eg~~~~~~EAm~~---G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
..|++++-..-++.-|..+++.+.. .+|||........+ +.+..|..+++..| +.++|..+|.+++..
T Consensus 67 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~~ 141 (146)
T 4dad_A 67 AFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAAQ 141 (146)
T ss_dssp TCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHhh
Confidence 3577766332223334555555443 56776543222111 23455778899999 999999999998875
No 477
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=29.82 E-value=84 Score=28.48 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=27.4
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
+|++++.. .+.||-+ +-.++.|...|++|.|+....
T Consensus 134 ~vlVlcG~----GNNGGDG---lv~AR~L~~~G~~V~V~~~~~ 169 (306)
T 3d3j_A 134 TVALLCGP----HVKGAQG---ISCGRHLANHDVQVILFLPNF 169 (306)
T ss_dssp EEEEEECS----SHHHHHH---HHHHHHHHHTTCEEEEECCCC
T ss_pred eEEEEECC----CCCHHHH---HHHHHHHHHCCCcEEEEEecC
Confidence 79999862 3556654 558899999999999987653
No 478
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=29.82 E-value=59 Score=28.35 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=24.6
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 10 k~vlVTG------as~giG~~---ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 10 CTALVTG------GSRGIGYG---IVEELASLGASVYTCSRN 42 (260)
T ss_dssp CEEEEES------CSSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHHHH---HHHHHHHCCCEEEEEeCC
Confidence 5667764 45777654 889999999999887653
No 479
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=29.81 E-value=61 Score=29.51 Aligned_cols=35 Identities=17% Similarity=0.375 Sum_probs=25.6
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.+.|||++|.. |.++ ..+++.|.+.||+|.++...
T Consensus 29 ~~~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGT--------GSMG---LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECC--------TTTH---HHHHHHHHHTTCEEEEECSC
T ss_pred cCCCEEEEECc--------cHHH---HHHHHHHHhCCCeEEEEcCC
Confidence 34689999964 4444 34788889999999987544
No 480
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=29.79 E-value=77 Score=26.91 Aligned_cols=46 Identities=9% Similarity=0.059 Sum_probs=30.0
Q ss_pred eEEEEEeccCCCCCC---CCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 84 LKIAVFSRKWPISTT---PGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 84 mkIl~v~~~~p~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
+||+++......... .|-...-+....+.|.+.|++|++++.....
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~~ 54 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGGE 54 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCBC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCCc
Confidence 379998863210000 2333345667788899999999999987644
No 481
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=29.77 E-value=60 Score=28.29 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=24.9
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 9 k~vlVTG------as~gIG~~---ia~~l~~~G~~V~~~~r~ 41 (259)
T 4e6p_A 9 KSALITG------SARGIGRA---FAEAYVREGATVAIADID 41 (259)
T ss_dssp CEEEEET------CSSHHHHH---HHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHHHH---HHHHHHHCCCEEEEEeCC
Confidence 5677774 45777754 889999999999887643
No 482
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=29.73 E-value=78 Score=24.01 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=23.4
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFT 124 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 124 (493)
..+||+++... ......+...|.+.|++|....
T Consensus 2 ~~~~ilivdd~----------~~~~~~l~~~l~~~g~~v~~~~ 34 (143)
T 3jte_A 2 SLAKILVIDDE----------STILQNIKFLLEIDGNEVLTAS 34 (143)
T ss_dssp -CCEEEEECSC----------HHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCEEEEEcCC----------HHHHHHHHHHHHhCCceEEEeC
Confidence 45789999763 3346667888888999877543
No 483
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=29.68 E-value=60 Score=28.32 Aligned_cols=33 Identities=18% Similarity=0.418 Sum_probs=24.5
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 8 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 8 KVAVITG------SSSGIGL---AIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CEEEEES------CSSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEcCC
Confidence 4667764 4577765 4889999999999887654
No 484
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=29.67 E-value=37 Score=31.89 Aligned_cols=46 Identities=15% Similarity=-0.007 Sum_probs=31.7
Q ss_pred CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338 81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD 128 (493)
Q Consensus 81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 128 (493)
+++|||+++.... +.+..-.-.....++++|.+.||+|+.+.....
T Consensus 2 ~~~~~v~vl~GG~--S~E~evSl~Sa~~v~~~l~~~~~~v~~i~i~~~ 47 (372)
T 3tqt_A 2 AEKLHISVLCGGQ--STEHEISIQSAKNIVNTLDAAKYLISVIFIDHV 47 (372)
T ss_dssp CCSEEEEEEEECS--STTHHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred CCCCEEEEEeccC--CCccHhHHHHHHHHHHHHhhcCceEEEEEECCC
Confidence 4689999998743 112222233456788899899999999887654
No 485
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=29.66 E-value=1.1e+02 Score=27.60 Aligned_cols=106 Identities=12% Similarity=0.038 Sum_probs=54.6
Q ss_pred CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC
Q 039338 80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE 157 (493)
Q Consensus 80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (493)
..+++||+++... .| .-+..|..+.... ..+|.++.+.... ..... ...+.+...+....
T Consensus 92 ~~~~~ri~vl~Sg-------~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~--~~~~A-------~~~gIp~~~~~~~~ 153 (292)
T 3lou_A 92 VAARPKVLIMVSK-------LE--HCLADLLFRWKMGELKMDIVGIVSNHPD--FAPLA-------AQHGLPFRHFPITA 153 (292)
T ss_dssp TTSCCEEEEEECS-------CC--HHHHHHHHHHHHTSSCCEEEEEEESSST--THHHH-------HHTTCCEEECCCCS
T ss_pred cCCCCEEEEEEcC-------CC--cCHHHHHHHHHcCCCCcEEEEEEeCcHH--HHHHH-------HHcCCCEEEeCCCc
Confidence 3457899998752 23 3466676666543 4687777766544 11111 11233322222111
Q ss_pred CCccccccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338 158 ADKWRYSKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG 206 (493)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 206 (493)
......-..+.+.+++.+||+|++.++. ++.-+....+.-++.+|.
T Consensus 154 ---~~r~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 201 (292)
T 3lou_A 154 ---DTKAQQEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAINIHH 201 (292)
T ss_dssp ---SCHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred ---CCHHHHHHHHHHHHHHhCCCEEEecCchhhCCHHHHhhhcCCeEEeCC
Confidence 0111112356666777899999987652 333333333335677775
No 486
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=29.61 E-value=59 Score=29.10 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=23.0
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS 125 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 125 (493)
++|||++|.. |.++. .++..|.+.||+|.++..
T Consensus 3 ~~~~i~iiG~--------G~~G~---~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGL--------GAMGK---PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECC--------CTTHH---HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECc--------cHHHH---HHHHHHHHCCCeEEEEeC
Confidence 3689999964 44443 367778888999987654
No 487
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=29.57 E-value=74 Score=27.93 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=25.6
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|+++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 29 ~k~vlITG------as~gIG~---~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 29 GKNVLITG------ASKGIGA---EIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CCEEEETT------CSSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 35777774 4567665 5889999999999888764
No 488
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=29.52 E-value=67 Score=28.02 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=25.0
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++ .+++.|+++|++|.+....
T Consensus 9 k~vlVTG------as~GIG~---aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 9 RTIVVAG------AGRDIGR---ACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEECS
T ss_pred CEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEcCC
Confidence 5777775 4577765 4889999999999887543
No 489
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=29.50 E-value=75 Score=29.40 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=32.8
Q ss_pred CceEEEEEeccCCCCCCCCchHHHHHHHHHHHH--hCCCEEEEEecCC
Q 039338 82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALA--RRGHRVHIFTSPV 127 (493)
Q Consensus 82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~--~~G~~V~v~~~~~ 127 (493)
..+||++++.. ..-|-...+.+++..|+ +.|..|.++..+.
T Consensus 16 ~~~~i~~~~gk-----GGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 16 DSLKWIFVGGK-----GGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp TTCSEEEEECS-----TTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCcEEEEEeCC-----CCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 35789999863 44566677889999999 8999999998874
No 490
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=29.49 E-value=67 Score=28.34 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=25.2
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 31 k~vlVTG------as~GIG~---aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 31 ASAIVSG------GAGGLGE---ATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp EEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 6777875 4577665 4889999999999887654
No 491
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=29.44 E-value=62 Score=30.03 Aligned_cols=92 Identities=16% Similarity=0.116 Sum_probs=49.4
Q ss_pred EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHc--CEEEeCC
Q 039338 312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAI--DIFVNPT 389 (493)
Q Consensus 312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~a--dv~v~ps 389 (493)
+.++.+|-=. -|...+++++... ++++++-+-+ ...+..++++... -+..-.+++.++++.. |+++..+
T Consensus 6 ~rigiIG~G~--~g~~~~~~~l~~~----~~~~l~av~d-~~~~~~~~~a~~~--~~~~~~~~~~~ll~~~~vD~V~i~t 76 (359)
T 3m2t_A 6 IKVGLVGIGA--QMQENLLPSLLQM----QDIRIVAACD-SDLERARRVHRFI--SDIPVLDNVPAMLNQVPLDAVVMAG 76 (359)
T ss_dssp EEEEEECCSH--HHHHTHHHHHHTC----TTEEEEEEEC-SSHHHHGGGGGTS--CSCCEESSHHHHHHHSCCSEEEECS
T ss_pred ceEEEECCCH--HHHHHHHHHHHhC----CCcEEEEEEc-CCHHHHHHHHHhc--CCCcccCCHHHHhcCCCCCEEEEcC
Confidence 6677777421 1112234444333 6788774443 3344444444221 0101124667777765 8888765
Q ss_pred CCCCCCChHHHHHHHcCCcEEecC
Q 039338 390 LRPQGLDLTLMEAMMSGKPVMASR 413 (493)
Q Consensus 390 ~~~eg~~~~~~EAm~~G~PvI~s~ 413 (493)
.. ..-.-.+.+|+..|++|++-+
T Consensus 77 p~-~~H~~~~~~al~aGkhVl~EK 99 (359)
T 3m2t_A 77 PP-QLHFEMGLLAMSKGVNVFVEK 99 (359)
T ss_dssp CH-HHHHHHHHHHHHTTCEEEECS
T ss_pred Cc-HHHHHHHHHHHHCCCeEEEEC
Confidence 32 222234678999999999754
No 492
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=29.38 E-value=62 Score=28.68 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=25.8
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
.|+++|+. ..||.++ .+++.|+++|++|.++...
T Consensus 27 ~k~vlVTG------as~GIG~---aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTG------GGSGIGR---ATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 36778875 4577765 4889999999999887654
No 493
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=29.35 E-value=59 Score=28.21 Aligned_cols=32 Identities=16% Similarity=0.310 Sum_probs=23.6
Q ss_pred EEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 86 IAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 86 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
+++|+. ..||.++. +++.|.++|++|.++...
T Consensus 2 ~vlVTG------as~gIG~a---ia~~l~~~G~~V~~~~r~ 33 (248)
T 3asu_A 2 IVLVTG------ATAGFGEC---ITRRFIQQGHKVIATGRR 33 (248)
T ss_dssp EEEETT------TTSTTHHH---HHHHHHHTTCEEEEEESC
T ss_pred EEEEEC------CCChHHHH---HHHHHHHCCCEEEEEeCC
Confidence 456664 45777754 889999999999887653
No 494
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=29.32 E-value=75 Score=27.63 Aligned_cols=36 Identities=14% Similarity=0.244 Sum_probs=27.8
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN 129 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 129 (493)
|+++||. ..+|+++ .+++.|+++|.+|.+.......
T Consensus 12 K~alVTG------as~GIG~---aia~~la~~Ga~Vv~~~~~~~~ 47 (242)
T 4b79_A 12 QQVLVTG------GSSGIGA---AIAMQFAELGAEVVALGLDADG 47 (242)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESSTTS
T ss_pred CEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCCHHH
Confidence 5889985 5577775 4889999999999988765443
No 495
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=29.27 E-value=62 Score=28.20 Aligned_cols=33 Identities=30% Similarity=0.500 Sum_probs=24.7
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 8 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 8 KLAVVTA------GSSGLGF---ASALELARNGARLLLFSRN 40 (260)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 5677774 4577765 4889999999999887654
No 496
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=29.24 E-value=1.7e+02 Score=25.13 Aligned_cols=67 Identities=7% Similarity=0.098 Sum_probs=40.7
Q ss_pred cCEEEeCCCCCCCCChHHHHHHHc--CCcEEecCCCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338 382 IDIFVNPTLRPQGLDLTLMEAMMS--GKPVMASRFPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSE 448 (493)
Q Consensus 382 adv~v~ps~~~eg~~~~~~EAm~~--G~PvI~s~~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~ 448 (493)
.|++++-..-++.-|..+++.+.. .+|||........+ +.+..|..|++..| +.++|..+|..++..
T Consensus 82 ~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~~~i~~~l~~ 154 (249)
T 3q9s_A 82 PDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARDTVEEKVRLLGLGADDYLIKPFHPDELLARVKVQLRQ 154 (249)
T ss_dssp CSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHHHhh
Confidence 466665322223334555655543 45676543222221 23455778999999 999999999998863
No 497
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=29.24 E-value=74 Score=28.31 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=25.5
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
|+++|+. ..||.+. .+++.|+++|++|.++....
T Consensus 17 k~vlVTG------as~gIG~---~~a~~L~~~G~~V~~~~r~~ 50 (291)
T 3rd5_A 17 RTVVITG------ANSGLGA---VTARELARRGATVIMAVRDT 50 (291)
T ss_dssp CEEEEEC------CSSHHHH---HHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEeC------CCChHHH---HHHHHHHHCCCEEEEEECCH
Confidence 5677774 4577775 58899999999998887543
No 498
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=29.22 E-value=71 Score=27.57 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=25.9
Q ss_pred eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338 84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV 127 (493)
Q Consensus 84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 127 (493)
.|+++|+. ..+|.++ .+++.|.++|++|.++....
T Consensus 7 ~k~vlITG------as~gIG~---~~a~~l~~~G~~v~~~~~~~ 41 (255)
T 3icc_A 7 GKVALVTG------ASRGIGR---AIAKRLANDGALVAIHYGNR 41 (255)
T ss_dssp TCEEEETT------CSSHHHH---HHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEC------CCChHHH---HHHHHHHHCCCeEEEEeCCc
Confidence 36778875 4567665 48899999999998876543
No 499
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=29.21 E-value=62 Score=28.04 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=24.1
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|.++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 14 k~vlItG------asggiG~---~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTG------GAQNIGL---ACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC------CCchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4566663 4467665 4889999999999888654
No 500
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=29.18 E-value=63 Score=28.09 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=24.6
Q ss_pred EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338 85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP 126 (493)
Q Consensus 85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 126 (493)
|+++|+. ..||.++ .+++.|.++|++|.++...
T Consensus 3 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 35 (256)
T 1geg_A 3 KVALVTG------AGQGIGK---AIALRLVKDGFAVAIADYN 35 (256)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 5667774 4577665 4889999999999887654
Done!