BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039340
(419 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVN6|AP180_ARATH Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana
GN=AP180 PE=1 SV=1
Length = 653
Score = 480 bits (1235), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/338 (68%), Positives = 279/338 (82%), Gaps = 23/338 (6%)
Query: 1 MPSKLKKAIGAVKDQTSISLAKVSNA-----NASNVEVLILKATRHDE-APLDERYVDEI 54
MPSKLKKAIGAVKDQTSISLAKV+N + + +EV ILKAT HDE P+D+R V EI
Sbjct: 1 MPSKLKKAIGAVKDQTSISLAKVANGATGGGDLTTLEVAILKATSHDEEVPIDDRLVTEI 60
Query: 55 LQLIASSKVYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRG 114
L +I+S K +A +CA I +RIG+TRNWIVALKSL+LVLRIFQDGDPYFPREV HAMKRG
Sbjct: 61 LGIISSKKSHAASCAAAIGRRIGRTRNWIVALKSLVLVLRIFQDGDPYFPREVLHAMKRG 120
Query: 115 QKFLNLSNFRDDSNSSPWDYTAFVRTFALYLDERLDCFITGKLHKRFSNRGRRNGRIE-- 172
K LNLS+FRDDSNS PWD+TAFVRTFALYLDERLDCF+TGKL +R++NR + GRI
Sbjct: 121 AKILNLSSFRDDSNSCPWDFTAFVRTFALYLDERLDCFLTGKLQRRYTNR-EQTGRISTN 179
Query: 173 -------------RSYAP-VCEMKPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVS 218
+S+ P V +MKP+MLLD+I+ WQ+LLDRAI ++PTG AK N LV++S
Sbjct: 180 STTRSRFNPKAGIKSHEPAVRDMKPVMLLDKITYWQKLLDRAIATRPTGDAKANRLVKMS 239
Query: 219 LYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKG 278
LYA++QESFDLYRDISD LALLLDSFFHLQY +C++AFQACV+ASKQFEEL++FYDL K
Sbjct: 240 LYAVMQESFDLYRDISDGLALLLDSFFHLQYQSCINAFQACVRASKQFEELNAFYDLSKS 299
Query: 279 TGVGRTSEYPSVQKVSEELIETLQEFLKDQASFPAANG 316
G+GRTSEYPS+QK+S EL+ETLQEFLKDQ+SFPA++G
Sbjct: 300 IGIGRTSEYPSIQKISLELLETLQEFLKDQSSFPASSG 337
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 346 VPATNAFSVAPTFSAQNPSQGGTTFENKDDPFGPCLDISADKHVAAES-VDQNLLWQEQQ 404
VP S PTF A T K DPF + + V+Q + QEQQ
Sbjct: 585 VPDDFEPSSTPTFKATE------TLPMKCDPFTTFESFGFGETFSENGGVNQQSVLQEQQ 638
Query: 405 LWLQNQNKIIAKH 417
+WLQNQ KIIAKH
Sbjct: 639 IWLQNQKKIIAKH 651
>sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430 OS=Arabidopsis
thaliana GN=At2g25430 PE=1 SV=2
Length = 653
Score = 298 bits (763), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 155/377 (41%), Positives = 228/377 (60%), Gaps = 68/377 (18%)
Query: 1 MPSKLKKAIGAVKDQTSISLAKVSNANASNVEVLILKATRHDEAPLDERYVDEILQLIAS 60
M ++KAIGAVKDQTSI +AKV++ A ++EV I+KAT HD+ P E+Y+ EIL L +
Sbjct: 1 MAPSIRKAIGAVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYIREILNLTSL 60
Query: 61 SKVYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNL 120
S+ Y +AC +S+R+ KTR+W+VALK+LMLV R+ +GDP F E+ ++ +RG + LN+
Sbjct: 61 SRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILYSTRRGTRMLNM 120
Query: 121 SNFRDDSNSSPWDYTAFVRTFALYLDERLDCFI----------TGKLHKRFSN------- 163
S+FRD+++SS WD++AFVRT+A YLD+RL+ + +G SN
Sbjct: 121 SDFRDEAHSSSWDHSAFVRTYAGYLDQRLELALFERKSGVSVNSGGNSSHHSNNDDRYGR 180
Query: 164 -------------------------RGRRNG-----RIERSYA----------------- 176
RG NG + RSY
Sbjct: 181 GRDDFRSPPPRSYDYENGGGGGSDFRGDNNGYGGVPKRSRSYGDMTEMGGGGGGGGRDEK 240
Query: 177 ----PVCEMKPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRD 232
P+ EM P + ++ + QRLLDR + +PTG AKN+ ++ ++LY +V+ESF LY D
Sbjct: 241 KVVTPLREMTPERIFGKMGHLQRLLDRFLSLRPTGLAKNSRMILIALYPVVRESFKLYAD 300
Query: 233 ISDALALLLDSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQK 292
I + LA+LLD FF ++Y +CV AF A A+KQ +EL +FY+ CK TGV R+SEYP VQ+
Sbjct: 301 ICEVLAVLLDKFFDMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGVARSSEYPEVQR 360
Query: 293 VSEELIETLQEFLKDQA 309
++ +L+ETL+EF++D+A
Sbjct: 361 ITSKLLETLEEFVRDRA 377
>sp|Q8S9J8|CAP1_ARATH Probable clathrin assembly protein At4g32285 OS=Arabidopsis
thaliana GN=At4g32285 PE=1 SV=2
Length = 635
Score = 294 bits (752), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 222/357 (62%), Gaps = 48/357 (13%)
Query: 1 MPSKLKKAIGAVKDQTSISLAKVSNANASNVEVLILKATRHDEAPLDERYVDEILQLIAS 60
M ++KAIG VKDQTSI +AKV++ A ++EV I+KAT HD+ ++Y+ EIL L +
Sbjct: 1 MALSMRKAIGVVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDQSSDKYIREILSLTSL 60
Query: 61 SKVYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNL 120
S+ Y AC +S+R+ KTR+WIVALK+LMLV R+ +GDP F E+ +A +RG + LN+
Sbjct: 61 SRGYVHACVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEILYATRRGTRILNM 120
Query: 121 SNFRDDSNSSPWDYTAFVRTFALYLDERLDC----------------------------- 151
S+FRD+++SS WD++AFVRT+A YLD+RL+
Sbjct: 121 SDFRDEAHSSSWDHSAFVRTYASYLDQRLELALFERRGRNGGGSSSSHQSNGDDGYNRSR 180
Query: 152 ------------FITG------KLHKRFSNRGRRNGRIE-RSYAPVCEMKPIMLLDRISN 192
+ TG K + F + R E +S P+ EM P + ++ +
Sbjct: 181 DDFRSPPPRTYDYETGNGFGMPKRSRSFGDVNEIGAREEKKSVTPLREMTPERIFGKMGH 240
Query: 193 WQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNC 252
QRLLDR + +PTG AKN+ ++ +++Y +V+ESF LY DI + LA+LLD FF ++Y +C
Sbjct: 241 LQRLLDRFLSCRPTGLAKNSRMILIAMYPVVKESFRLYADICEVLAVLLDKFFDMEYTDC 300
Query: 253 VSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFLKDQA 309
V AF A A+KQ +EL +FY CK TGV R+SEYP VQ+++ +L+ETL+EF++D+A
Sbjct: 301 VKAFDAYASAAKQIDELIAFYHWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRA 357
>sp|Q8GX47|CAP3_ARATH Putative clathrin assembly protein At4g02650 OS=Arabidopsis
thaliana GN=At4g02650 PE=2 SV=2
Length = 611
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 215/333 (64%), Gaps = 23/333 (6%)
Query: 3 SKLKKAIGAVKDQTSISLAKVSNANAS--NVEVLILKATRHDEAPLDERYVDEILQLIAS 60
SKLK+AIGAVKDQTS+ LAKV ++S +E+ ++KATRHD+ P +++Y+ EIL L +
Sbjct: 4 SKLKRAIGAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRHDDYPAEDKYIREILCLTSY 63
Query: 61 SKVYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNL 120
S+ Y AC +S+R+ KT+NW VALK+L+L+ R+ DGD + +E+ A +RG + LN+
Sbjct: 64 SRNYVSACVATLSRRLNKTKNWSVALKTLILIQRLLTDGDRAYEQEIFFATRRGTRLLNM 123
Query: 121 SNFRDDSNSSPWDYTAFVRTFALYLDERLDCFI--------------------TGKLHKR 160
S+FRD S S WDY+AFVRT+ALYLDERLD + H+
Sbjct: 124 SDFRDASQSDSWDYSAFVRTYALYLDERLDYRMQGRRGKKKSGGGGGGDGDSGEEDDHRG 183
Query: 161 FSNRGRRNGRIERSYAPVCEMKPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLY 220
SN R + +S PV EMK + +R+ + Q+LLDR + +PTG AKNN +V V++Y
Sbjct: 184 TSNDIRSKAIVVKS-KPVAEMKTEKIFNRVQHLQQLLDRFLACRPTGNAKNNRVVIVAMY 242
Query: 221 AIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTG 280
IV+ESF LY +I++ + +L++ F L H+ + ++ + SKQF+EL FY CK
Sbjct: 243 PIVKESFQLYYNITEIMGVLIERFMELDIHDSIKVYEIFCRVSKQFDELDPFYGWCKNMA 302
Query: 281 VGRTSEYPSVQKVSEELIETLQEFLKDQASFPA 313
V R+SEYP ++K++++ ++ + EF++D+++ A
Sbjct: 303 VARSSEYPELEKITQKKLDLMDEFIRDKSALAA 335
>sp|Q9SA65|CAP4_ARATH Putative clathrin assembly protein At1g03050 OS=Arabidopsis
thaliana GN=At1g03050 PE=2 SV=1
Length = 599
Score = 281 bits (718), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 213/325 (65%), Gaps = 16/325 (4%)
Query: 3 SKLKKAIGAVKDQTSISLAKVS--NANASNVEVLILKATRHDEAPLDERYVDEILQLIAS 60
SK K+AIGAVKDQTS+ LAKV+ +A+ S ++V I+KATRH+E P +E+Y+ EIL L +
Sbjct: 4 SKFKRAIGAVKDQTSVGLAKVNGRSASLSELDVAIVKATRHEEFPAEEKYIREILSLTSY 63
Query: 61 SKVYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNL 120
S+ Y AC +S+R+ KT+ W VALK+L+L+ R+ +GD + +E+ A +RG + LN+
Sbjct: 64 SRSYINACVSTLSRRLNKTKCWTVALKTLILIQRLLGEGDQAYEQEIFFATRRGTRLLNM 123
Query: 121 SNFRDDSNSSPWDYTAFVRTFALYLDERLDCFITGKLHKR--FSNRGRRNGRIERSYA-- 176
S+FRD S S+ WDY+AFVRT+ALYLDERLD + + KR + G + + A
Sbjct: 124 SDFRDVSRSNSWDYSAFVRTYALYLDERLDFRMQARHGKRGVYCVGGEADEEEQDQAAAD 183
Query: 177 ----------PVCEMKPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQES 226
P+ EMK + RI + Q+LLDR + +PTG A+NN +V V+LY IV+ES
Sbjct: 184 LSTAIVVRSQPIAEMKTEQIFIRIQHLQQLLDRFLACRPTGNARNNRVVIVALYPIVKES 243
Query: 227 FDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSE 286
F +Y D+++ + +L++ F L + + + + SKQFEEL FY CK G+ R+SE
Sbjct: 244 FQIYYDVTEIMGILIERFMELDIPDSIKVYDIFCRVSKQFEELDQFYSWCKNMGIARSSE 303
Query: 287 YPSVQKVSEELIETLQEFLKDQASF 311
YP ++K++++ ++ + EF++D+++
Sbjct: 304 YPEIEKITQKKLDLMDEFIRDKSAL 328
>sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600 OS=Arabidopsis
thaliana GN=At2g01600 PE=2 SV=2
Length = 571
Score = 215 bits (548), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 189/304 (62%), Gaps = 4/304 (1%)
Query: 6 KKAIGAVKDQTSISLAKVSNANASNVEVLILKATRHDEAPLDERYVDEILQLIASSKVYA 65
+KA GA+KD T + L +V N+ ++++V I+KAT H E P +R++ +I + ++ A
Sbjct: 8 RKAYGALKDSTKVGLVRV-NSEYADLDVAIVKATNHVECPPKDRHLRKIFAATSVTRARA 66
Query: 66 --VACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSNF 123
C +S+R+ KTRNW VALK+L+++ R+ ++GDP F E+ + +RG + L LSNF
Sbjct: 67 DVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRG-RILQLSNF 125
Query: 124 RDDSNSSPWDYTAFVRTFALYLDERLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEMKP 183
+DDS+ WD +A+VRT+AL+L+ERL+CF K + N ++ Y+ ++
Sbjct: 126 KDDSSPIAWDCSAWVRTYALFLEERLECFRVLKYDTEAERLPKSNPGQDKGYSRTRDLDG 185
Query: 184 IMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDS 243
LL+++ Q+LL R IG +P GAA +N ++Q +L +++ESF +Y I+D + L+D
Sbjct: 186 EELLEQLPALQQLLYRLIGCRPEGAANHNHVIQYALALVLKESFKVYCAINDGIINLIDK 245
Query: 244 FFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQE 303
FF + H +++ + +A +Q LS FY+ CKG + R ++P +++ + + T++E
Sbjct: 246 FFEMAKHEAITSLEIYKRAGQQARSLSDFYEACKGLELARNFQFPVLREPPQSFLTTMEE 305
Query: 304 FLKD 307
++K+
Sbjct: 306 YIKE 309
>sp|P94017|CAP9_ARATH Putative clathrin assembly protein At1g14910 OS=Arabidopsis
thaliana GN=At1g14910 PE=2 SV=2
Length = 692
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 216/374 (57%), Gaps = 11/374 (2%)
Query: 6 KKAIGAVKDQTSISLAKVSNANASNVEVLILKATRHDEAPLDERYVDEILQLIASSKVYA 65
++A GA+KD T + L +V N++ + ++V I+KAT H E P +R++ +I +A+S +
Sbjct: 8 RRAYGALKDTTKVGLVRV-NSDYAELDVAIVKATNHVECPPKDRHLRKIF--LATSAIRP 64
Query: 66 VA----CAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLS 121
A C +S+R+ KTRNW VALK+L+++ R+ +DGDP F E+ + ++G + + +S
Sbjct: 65 RADVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQKG-RIMQIS 123
Query: 122 NFRDDSNSSPWDYTAFVRTFALYLDERLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEM 181
NF+DDS+ WD + +VRT+AL+L+ERL+CF K + + E+ Y+ ++
Sbjct: 124 NFKDDSSPVAWDCSGWVRTYALFLEERLECFRVLKYDIEAERLPKVSPGQEKGYSKTRDL 183
Query: 182 KPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRDISDALALLL 241
LL+++ Q+LL R IG KP GAAK+N ++Q +L +++ESF +Y I++ + L+
Sbjct: 184 DGEKLLEQLPALQQLLHRLIGCKPEGAAKHNHIIQYALSLVLKESFKVYCAINEGIINLV 243
Query: 242 DSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETL 301
+ FF + H + A + +A Q LS+FY++CKG + R ++P +++ + + T+
Sbjct: 244 EKFFEMPRHEAIKALEIYKRAGLQAGNLSAFYEVCKGLELARNFQFPVLREPPQSFLTTM 303
Query: 302 QEFLKDQASFPAANGRSALMLPATPIKDPGSSSDRVGLSSSLAIVPATNAFSVAPTFSAQ 361
+E+++D L+L TP D G +S+ VG S + + +V P+ Q
Sbjct: 304 EEYMRDAPQMVDVT-SGPLLLTYTP--DDGLTSEDVGPSHEEHETSSPSDSAVVPSEETQ 360
Query: 362 NPSQGGTTFENKDD 375
SQ + E +
Sbjct: 361 LSSQSPPSVETPQN 374
>sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g57200 OS=Arabidopsis
thaliana GN=At5g57200 PE=3 SV=1
Length = 591
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 186/307 (60%), Gaps = 5/307 (1%)
Query: 3 SKLKKAIGAVKDQTSISLAKVSNANASNVEVLILKATRHDEAPLDERYVDEILQL--IAS 60
+ +KA GA+KD T++ LAKV N+ ++++ I+KAT H E+P ER+V +I +
Sbjct: 5 TSFRKAYGALKDTTTVGLAKV-NSEFKDLDIAIVKATNHVESPPKERHVRKIFSATSVIQ 63
Query: 61 SKVYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNL 120
+ C +SKR+ KTRNW+VA+K L+++ R ++GDP F E+ + R + L +
Sbjct: 64 PRADVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHR-RHILRI 122
Query: 121 SNFRDDSNSSPWDYTAFVRTFALYLDERLDCFITGKLHKRFSNRGRRNGRIERSYAPVCE 180
SNF+DD++ WD +A+VRT+AL+L+ERL+C+ K + +G +++
Sbjct: 123 SNFKDDTSPLAWDCSAWVRTYALFLEERLECYRVLKYDIEAERLPKASGAASKTHR-TRM 181
Query: 181 MKPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRDISDALALL 240
+ LL+++ Q+LL R IG +P GAA +N L+Q +L +++ESF +Y I+D + L
Sbjct: 182 LSGEDLLEQLPALQQLLYRLIGCQPEGAAYSNYLIQYALALVLKESFKIYCAINDGIINL 241
Query: 241 LDSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQKVSEELIET 300
+D FF + H+ V A +A +Q E L+ FYD CKG + R ++P++++ + T
Sbjct: 242 VDMFFEMSRHDAVKALNIYKRAGQQAENLAEFYDYCKGLELARNFQFPTLRQPPPSFLAT 301
Query: 301 LQEFLKD 307
++E++K+
Sbjct: 302 MEEYIKE 308
>sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940 OS=Arabidopsis
thaliana GN=At4g25940 PE=2 SV=1
Length = 601
Score = 202 bits (514), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 185/312 (59%), Gaps = 11/312 (3%)
Query: 5 LKKAIGAVKDQTSISLAKVSNANASNVEVLILKATRHDEAPLDERYVDEILQL--IASSK 62
+KA+GA+KD T++S+AKV N+ +++V I+KAT H E+ ER++ I + +
Sbjct: 7 FRKAVGAIKDSTTVSIAKV-NSEFKDLDVAIVKATNHVESAPKERHIRRIFSATSVVQPR 65
Query: 63 VYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSN 122
C ++KR+ KTRNW+VA+K L+++ R ++GDP F E+ + RG L +SN
Sbjct: 66 ADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSHRGH-ILRISN 124
Query: 123 FRDDSNSSPWDYTAFVRTFALYLDERLDCF------ITGKLHKRFSNRGRRNGRIERSYA 176
F+DD++ WD +A++RT+AL+L+ERL+C+ I + + S +N S
Sbjct: 125 FKDDTSPLAWDCSAWIRTYALFLEERLECYRVLKYDIEAERLPKGSGASSKNVDFNASQT 184
Query: 177 PVCEM-KPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRDISD 235
M LL+++ Q+LL R IG +P G+A +N L+Q +L +++ESF +Y I+D
Sbjct: 185 YRTRMLSDEELLEQLPALQQLLYRLIGCQPEGSAYSNYLIQYALALVLKESFKIYCAIND 244
Query: 236 ALALLLDSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQKVSE 295
+ L+D FF + H+ V A +A +Q E L+ FY+ CKG + R ++P++++
Sbjct: 245 GIINLVDMFFEMSRHDAVKALNIYKRAGQQAENLADFYEYCKGLELARNFQFPTLRQPPP 304
Query: 296 ELIETLQEFLKD 307
+ T+++++K+
Sbjct: 305 SFLATMEDYIKE 316
>sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200 OS=Arabidopsis
thaliana GN=At5g35200 PE=1 SV=1
Length = 544
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 177/305 (58%), Gaps = 15/305 (4%)
Query: 5 LKKAIGAVKDQTSISLAKVSNANASNVEVLILKATRHDEAPLDERYVDEILQLIASSKVY 64
L++ +GA+KD T++SLAKV N++ +++ I+KAT H E P ERY+ I I++++
Sbjct: 11 LRRYLGAIKDTTTVSLAKV-NSDYKELDIAIVKATNHVERPSKERYIRAIFMAISATRPR 69
Query: 65 A--VACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSN 122
A C +++R+ +T NW VALK+L+++ R ++ D F EV + + LN+S+
Sbjct: 70 ADVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINYSRSRSHMLNMSH 129
Query: 123 FRDDSNSSPWDYTAFVRTFALYLDERLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEMK 182
F+DDS + W Y+A+VR +AL+L+ERL+CF K +E ++
Sbjct: 130 FKDDSGPNAWAYSAWVRFYALFLEERLECFRVLKYD------------VEVDPPRTKDLD 177
Query: 183 PIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRDISDALALLLD 242
LL+++ Q LL R + +P GAA N ++Q++L ++ ES +Y+ ++D + L+D
Sbjct: 178 TPDLLEQLPALQELLFRVLDCQPEGAAVQNHIIQLALSMVISESTKIYQALTDGIDNLVD 237
Query: 243 SFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQ 302
FF +Q ++ V A +A KQ LS F+++CK VGR + +++ ++ ++
Sbjct: 238 KFFDMQRNDAVKALDMYRRAVKQAGRLSEFFEVCKSVNVGRGERFIKIEQPPTSFLQAME 297
Query: 303 EFLKD 307
E++K+
Sbjct: 298 EYVKE 302
>sp|Q9C502|CAP11_ARATH Putative clathrin assembly protein At1g33340 OS=Arabidopsis
thaliana GN=At1g33340 PE=2 SV=1
Length = 374
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 152/308 (49%), Gaps = 16/308 (5%)
Query: 1 MPSKLKKAIGAVKDQTSISLAKVSNANAS---NVEVLILKATRHDEAPLDERYVDEILQL 57
+ +K ++ +G KD SI A V N N ++EV +++AT HD+ P+D++ + EIL L
Sbjct: 5 LSAKFRQVLGLAKDHASIGRAIVQNYNEKAFFDIEVAVVRATSHDDCPVDDKTMHEILFL 64
Query: 58 IASSKVYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKF 117
++++ A+ IS+R+ KTR+ +VA K+L+L R+ + +++ A G
Sbjct: 65 VSNTPGSIPFLAEQISRRLAKTRDCLVAGKTLLLFHRLLRGSSRSIEQQLHIAHTSGHLQ 124
Query: 118 LNLSNFRDDSNSSPWDYTAFVRTFALYLDERLDCFIT--GKLHKRFSNRGRRNGRIERSY 175
+ S F +S + F++ + YL ER+ I GKL S + + E+S
Sbjct: 125 IGCSWFMMSLDSRSF---VFLQNYVAYLQERVGWIINQAGKLEPVMSGGTKFSRYKEKSM 181
Query: 176 APVCEMKPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRDISD 235
V + P Q + + + P A ++LVQ + I++ESF +Y SD
Sbjct: 182 DLVFHILP--------KCQEFIAQVLKCSPVDAWPIDNLVQAATGNILKESFQVYMTYSD 233
Query: 236 ALALLLDSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQKVSE 295
+ L+ F L A KAS+Q ++L YD C+G ++ +YPSVQ +S
Sbjct: 234 GMTALVSMLFDLSRPARDLACGMLRKASQQIQDLRILYDKCRGFAGMKSLDYPSVQAISM 293
Query: 296 ELIETLQE 303
+ I L+E
Sbjct: 294 DHIVALEE 301
>sp|Q9C9X5|CAP12_ARATH Putative clathrin assembly protein At1g68110 OS=Arabidopsis
thaliana GN=At1g68110 PE=2 SV=1
Length = 379
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 24/306 (7%)
Query: 6 KKAIGAVKDQTSISLAKVSNANAS----NVEVLILKATRHDEAPLDERYVDEILQLIASS 61
K+A A+KD+ S+ S N+S ++E I+KAT HD++ +D + + I SS
Sbjct: 5 KRAAAAIKDRKSLLAVGFSRRNSSYRNADLEAAIIKATSHDDSSVDYSNAHRVYKWIRSS 64
Query: 62 KVYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLS 121
+ IS R+ TR+WIVALKSLML+ + P V +R +LS
Sbjct: 65 PLNLKTLVYAISSRVNHTRSWIVALKSLMLLHGVLCCKVP----SVVGEFRRLP--FDLS 118
Query: 122 NFRDDSN--SSPWDYTAFVRTFALYLDERLDCFITGKLHKRFSNRGRRNGRIERSYAPVC 179
+F D + S W + FVRT+ +L F++ ++H+ RG +E++ V
Sbjct: 119 DFSDGHSCLSKTWGFNVFVRTYFAFL-HHYSSFLSDQIHRL---RGNNRRSLEKTSDSV- 173
Query: 180 EMKPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRDISDALAL 239
I L+RI Q LLD + +P +L+ ++ +V ES ++Y I A+
Sbjct: 174 ----IQELERIQKLQSLLDMILQIRPVADNMKKTLILEAMDCLVIESINIYGRICGAVMK 229
Query: 240 LLDSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQKVSEELIE 299
+L + + K + Q E+L +++ CKG GV E P ++ EE +E
Sbjct: 230 VLPL---AGKSEAATVLKIVNKTTSQGEDLIVYFEFCKGFGVSNAREIPQFVRIPEEEVE 286
Query: 300 TLQEFL 305
+++ +
Sbjct: 287 AIEKMI 292
>sp|Q9FRH3|CAP13_ARATH Putative clathrin assembly protein At1g25240 OS=Arabidopsis
thaliana GN=At1g25240 PE=3 SV=1
Length = 376
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 145/311 (46%), Gaps = 38/311 (12%)
Query: 6 KKAIGAVKDQTS---ISLAKVSNANASNVEVLILKATRHDEAPLDERYVDEILQLIASSK 62
K+A GA+KD+ + I ++ ++ +++ I+ AT HD++ +D + + I SS
Sbjct: 5 KRASGALKDRKTLFTIGFSRKTSFRNPDLDSAIIHATSHDDSSVDYHNAHRVYKWIRSSP 64
Query: 63 VYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSN 122
+S R+ +TR+WIVALK+LMLV + +V + + +LS+
Sbjct: 65 ANLKPLVHALSSRVNRTRSWIVALKALMLVHGVLC-------CKVTSLQEIRRLPFDLSD 117
Query: 123 FRDDSN--SSPWDYTAFVRTFALYLDERLDCFITGKLHKRFSNRGRRNGRIERSYAPVCE 180
F D + S W + AF+R + +LD+ F++ ++ +R + E
Sbjct: 118 FSDGHSRPSKTWGFNAFIRAYFSFLDQ-YSFFLSDQIRRRHKKPQLDSVNQE-------- 168
Query: 181 MKPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRDISDALALL 240
L+RI Q LL + +P +L+ ++ +V E FD+Y I A+A L
Sbjct: 169 ------LERIEKLQSLLHMLLQIRPMADNMKKTLILEAMDCVVIEIFDIYGRICSAIAKL 222
Query: 241 LDSFFHLQYH------NCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQKVS 294
L ++ H V A + KA+ Q E+L+ +++ CK GV + P +
Sbjct: 223 L-----IKIHPAAGKAEAVIALKIVKKATSQGEDLALYFEFCKEFGVSNAHDIPKFVTIP 277
Query: 295 EELIETLQEFL 305
EE I+ +++ +
Sbjct: 278 EEDIKAIEKVI 288
>sp|Q9LQW4|CAP15_ARATH Putative clathrin assembly protein At1g14686 OS=Arabidopsis
thaliana GN=At1g14686 PE=3 SV=1
Length = 339
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 30/277 (10%)
Query: 35 ILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVALKSLMLVLR 94
++KAT HDE +D I + + SS +IS R+ +TR+W VALK LML+
Sbjct: 28 VVKATSHDELSIDTESAQFIYRHVLSSPSSLKPLVSLISSRVKRTRSWAVALKGLMLM-- 85
Query: 95 IFQDGDPYFPREVAHAMKRGQKFLNLSNFRDDSN---SSPWDYTAFVRTFALYLDERLDC 151
+F + A G+ +LS+F + ++ S + FVR + +LD R
Sbjct: 86 -----HGFFLCKSTVAESIGRLPFDLSSFGEGNSRIMSKSGGFNLFVRAYFAFLDRRSIL 140
Query: 152 FITGKLHKRFSNRGRRNGRIERSYAPVCEMKPIMLLDRISNWQRLLDRAIGSKPTGAAKN 211
F G NR R N E ++ L I Q ++D I KP G
Sbjct: 141 FHDG-------NRHRYNE----------ESSVLIRLVIIRKMQIIVDSLIRIKPIGENMM 183
Query: 212 NSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVS--AFQACVKASKQFEEL 269
++ ++ +V E ++Y I +A +L + H + + A + K+ KQ EL
Sbjct: 184 IPVINEAMENVVSEIMEIYGWICRRIAEVLPN-VHSKIGKTEADLALKIVAKSMKQGGEL 242
Query: 270 SSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFLK 306
+++ CK GV E P+ ++ E + L E ++
Sbjct: 243 KKYFEFCKDLGVSNAQEIPNFVRIPEADVIHLDELVR 279
>sp|Q9SHV5|CAP14_ARATH Putative clathrin assembly protein At2g01920 OS=Arabidopsis
thaliana GN=At2g01920 PE=2 SV=3
Length = 312
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 132/326 (40%), Gaps = 51/326 (15%)
Query: 6 KKAIGAVKDQTSISLAKVSNANASNVEVLILKATRHDEAPLDERYVDEILQLIASSKVYA 65
++ GA+KD+ S+ A A+ ++KAT H++ +D V I + I S+
Sbjct: 9 RRVSGAIKDKLSLITATDEKFTAA-----VIKATSHNDVSMDIENVQFIYRYIQSNPSSF 63
Query: 66 VACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSNF-- 123
+ +S R+ TRNW VALK LML+ +F G + G+ +LS F
Sbjct: 64 KPIIRAVSLRVEHTRNWTVALKCLMLLHGLFFSG-------IMTVDSIGRLPFDLSGFGR 116
Query: 124 RDDSNSSPWDYTAFVRTFALYLDERLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEMKP 183
R S + FVR + ++LDER + K
Sbjct: 117 RKSRFSRTGRFNIFVRAYFMFLDERSILYYN---------------------------KN 149
Query: 184 IMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAIVQESFDLYRDISDALALLL-- 241
++ L+ I QR++D + KP G LV ++ ++ E + I A L
Sbjct: 150 MIRLEIIVKMQRIVDSLMRIKPIG---ETPLVIEAMEYVISEVVLINGHICRGFAGFLSD 206
Query: 242 --DSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRTSEYPSVQKVSEELIE 299
+ + A K+ Q E+L +++ C+G GV E ++ +++E +
Sbjct: 207 VQSNMLEISSAEADLAMNIVAKSLSQREKLFKYFEFCRGFGVTNAQETSNILRITESQMI 266
Query: 300 TLQEFLKDQASFPAANGRSALMLPAT 325
L + L P + ++A + P T
Sbjct: 267 VLDKLLHIA---PELDWKAAKVTPVT 289
>sp|O60641|AP180_HUMAN Clathrin coat assembly protein AP180 OS=Homo sapiens GN=SNAP91 PE=1
SV=2
Length = 907
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 123/279 (44%), Gaps = 14/279 (5%)
Query: 27 NASNVEVLILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVAL 86
S V + KAT H+ ++++D ++Q + V A + +R +W+V
Sbjct: 18 TGSAVARAVCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFER-ATNSSWVVVF 76
Query: 87 KSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSNFRDDSNSSPWDYTAFVRTFALYLD 146
K+L+ + G+ F + + R F NLSNF D S S +D + F+R ++ YL+
Sbjct: 77 KALVTTHHLMVHGNERF---IQYLASRNTLF-NLSNFLDKSGSHGYDMSTFIRRYSRYLN 132
Query: 147 ERLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEMKPIMLLDRISNWQRLLDRAIGSKPT 206
E+ F ++ F+ + + R+ AP +K + +L Q +D +
Sbjct: 133 EK--AFSYRQMAFDFARVKKGADGVMRTMAPEKLLKSMPIL------QGQIDALLEFDVH 184
Query: 207 GAAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQF 266
N ++ + + ++ L+ +D + LL+ FF ++ C A + + +
Sbjct: 185 PNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRM 244
Query: 267 EELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFL 305
+S F + + G+ + + P + + L+ETL++ L
Sbjct: 245 TRVSEFLKVAEQVGIDK-GDIPDLTQAPSSLMETLEQHL 282
>sp|Q61548|AP180_MOUSE Clathrin coat assembly protein AP180 OS=Mus musculus GN=Snap91 PE=1
SV=1
Length = 901
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 121/279 (43%), Gaps = 14/279 (5%)
Query: 27 NASNVEVLILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVAL 86
S V + KAT H+ ++++D ++Q + V A + +R +W+V
Sbjct: 18 TGSAVARAVCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFER-ATNSSWVVVF 76
Query: 87 KSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSNFRDDSNSSPWDYTAFVRTFALYLD 146
K+L+ + G+ F + + R F NLSNF D S S +D + F+R ++ YL+
Sbjct: 77 KALVTTHHLMVHGNERF---IQYLASRNTLF-NLSNFLDKSGSHGYDMSTFIRRYSRYLN 132
Query: 147 ERLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEMKPIMLLDRISNWQRLLDRAIGSKPT 206
E+ F ++ F+ + + R+ M P LL + Q +D +
Sbjct: 133 EK--AFSYRQMAFDFARVKKGADGVMRT------MVPEKLLKSMPILQGQIDALLEFDVH 184
Query: 207 GAAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQF 266
N ++ + + ++ L+ +D + LL+ FF ++ C A + + +
Sbjct: 185 PNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRM 244
Query: 267 EELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFL 305
+S F + + G+ + + P + + L+ETL++ L
Sbjct: 245 TRVSEFLKVAEQVGIDK-GDIPDLTQAPSSLMETLEQHL 282
>sp|Q05140|AP180_RAT Clathrin coat assembly protein AP180 OS=Rattus norvegicus GN=Snap91
PE=1 SV=1
Length = 915
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 14/279 (5%)
Query: 27 NASNVEVLILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVAL 86
S V + KAT H+ ++++D ++Q + V A + +R +W+V
Sbjct: 18 TGSAVARAVCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFER-ATNSSWVVVF 76
Query: 87 KSLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSNFRDDSNSSPWDYTAFVRTFALYLD 146
K+L+ + G+ F + + R F NLSNF D S S +D + F+R ++ YL+
Sbjct: 77 KALVTTHHLMVHGNERF---IQYLASRNTLF-NLSNFLDKSGSHGYDMSTFIRRYSRYLN 132
Query: 147 ERLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEMKPIMLLDRISNWQRLLDRAIGSKPT 206
E+ F ++ F+ + + R+ M P LL + Q +D +
Sbjct: 133 EK--AFSYRQMAFDFARVKKGADGVMRT------MVPEKLLKSMPILQGQIDALLEFDVH 184
Query: 207 GAAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQF 266
N ++ + + ++ L+ +D + LL+ FF ++ C A + + +
Sbjct: 185 PNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRM 244
Query: 267 EELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFL 305
+S F + G+ + + P + + L+ETL++ L
Sbjct: 245 TRVSEFLKVADEVGIDK-GDIPDLTQAPSSLMETLEQHL 282
>sp|P38856|AP18A_YEAST Clathrin coat assembly protein AP180A OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1801 PE=1 SV=1
Length = 637
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 125/276 (45%), Gaps = 17/276 (6%)
Query: 34 LILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVALKSLMLVL 93
L+ AT+ AP ++Y+D IL L S++ + + RI T W + KSL++V
Sbjct: 7 LVKGATKIKSAPPKQKYLDPIL-LGTSNEEDFYEIVKGLDSRINDTA-WTIVYKSLLVVH 64
Query: 94 RIFQDGDPYFPREVA-HAMKRGQKFLNLSNFRDDSNSSPWDYTAFVRTFALYLDERLDCF 152
+ ++G ++VA R +F ++ N R + S+ D A R + YL R C
Sbjct: 65 LMIREGS----KDVALRYYSRNLEFFDIENIRGSNGSASGDMRALDR-YDNYLKVR--CR 117
Query: 153 ITGKLHKRFSNRGRRNGRIERSYAPVCEMKPIML---LDRISNWQRLLDRAIGSKPTGAA 209
GK+ K + G R ++ K + LD + + + + I +K T
Sbjct: 118 EFGKIKKDYVRDGYRTLKLNSGNYGSSRNKQHSINIALDHVESLEVQIQALIKNKYTQYD 177
Query: 210 KNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQFEEL 269
+N L+ ++Q+ LY +++ + LL+SFF L +HN + + K F +L
Sbjct: 178 LSNELIIFGFKLLIQDLLALYNALNEGIITLLESFFELSHHNA----ERTLDLYKTFVDL 233
Query: 270 SSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFL 305
+ +G + P ++ ++ +L+ +L+E L
Sbjct: 234 TEHVVRYLKSGKTAGLKIPVIKHITTKLVRSLEEHL 269
>sp|Q8L936|CAP16_ARATH Putative clathrin assembly protein At4g40080 OS=Arabidopsis
thaliana GN=At4g40080 PE=2 SV=2
Length = 365
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 9 IGAVKDQTSISLAKVSNANASN----VEVLILKATRHD-EAPLDERYVDEILQLIASSKV 63
IG +KD+ S S A + ++N + + +L+AT HD P R++ IL S+
Sbjct: 11 IGRIKDKASQSKAALVSSNTKSKTLSFHLSVLRATTHDPSTPPGNRHLAVILSAGTGSRA 70
Query: 64 YAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVA-HAMKRGQKFLNLSN 122
A + + I +R+ T + VALKSL+++ I + G +++ G+ +L LS
Sbjct: 71 TASSAVESIMERLHTTGDACVALKSLIIIHHIVKHGRFILQDQLSVFPASGGRNYLKLSA 130
Query: 123 FRDDSNSSPWDYTAFVRTFALYLDERL 149
FRD+ + W+ +++VR +ALYL+ L
Sbjct: 131 FRDEKSPLMWELSSWVRWYALYLEHLL 157
>sp|O55012|PICA_RAT Phosphatidylinositol-binding clathrin assembly protein OS=Rattus
norvegicus GN=Picalm PE=1 SV=1
Length = 640
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 118/278 (42%), Gaps = 14/278 (5%)
Query: 28 ASNVEVLILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVALK 87
S V + KAT H+ ++++D ++Q V A + +R + +W+V K
Sbjct: 19 GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNS-SWVVVFK 77
Query: 88 SLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSNFRDDSNSSPWDYTAFVRTFALYLDE 147
SL+ + G+ F + + R F NLSNF D S +D + F+R ++ YL+E
Sbjct: 78 SLITTHHLMVYGNERF---IQYLASRNTLF-NLSNFLDKSGLQGYDMSTFIRRYSRYLNE 133
Query: 148 RLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEMKPIMLLDRISNWQRLLDRAIGSKPTG 207
+ + ++ F+ R + R+ M LL + Q +D +
Sbjct: 134 KAVSY--RQVAFDFTKVKRGADGVMRT------MNTEKLLKTVPIIQNQMDALLDFNVNS 185
Query: 208 AAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQFE 267
N ++ + + +++ L+ ++ + LL+ +F ++ + C K +
Sbjct: 186 NELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMT 245
Query: 268 ELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFL 305
+S F + + G+ R + P + + L++ L++ L
Sbjct: 246 RISEFLKVAEQVGIDR-GDIPDLSQAPSSLLDALEQHL 282
>sp|Q13492|PICAL_HUMAN Phosphatidylinositol-binding clathrin assembly protein OS=Homo
sapiens GN=PICALM PE=1 SV=2
Length = 652
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 118/278 (42%), Gaps = 14/278 (5%)
Query: 28 ASNVEVLILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVALK 87
S V + KAT H+ ++++D ++Q V A + +R + +W+V K
Sbjct: 19 GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNS-SWVVVFK 77
Query: 88 SLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSNFRDDSNSSPWDYTAFVRTFALYLDE 147
SL+ + G+ F + + R F NLSNF D S +D + F+R ++ YL+E
Sbjct: 78 SLITTHHLMVYGNERF---IQYLASRNTLF-NLSNFLDKSGLQGYDMSTFIRRYSRYLNE 133
Query: 148 RLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEMKPIMLLDRISNWQRLLDRAIGSKPTG 207
+ + ++ F+ R + R+ M LL + Q +D +
Sbjct: 134 KAVSY--RQVAFDFTKVKRGADGVMRT------MNTEKLLKTVPIIQNQMDALLDFNVNS 185
Query: 208 AAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQFE 267
N ++ + + +++ L+ ++ + LL+ +F ++ + C K +
Sbjct: 186 NELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMT 245
Query: 268 ELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFL 305
+S F + + G+ R + P + + L++ L++ L
Sbjct: 246 RISEFLKVAEQVGIDR-GDIPDLSQAPSSLLDALEQHL 282
>sp|Q7M6Y3|PICA_MOUSE Phosphatidylinositol-binding clathrin assembly protein OS=Mus
musculus GN=Picalm PE=1 SV=1
Length = 660
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 118/278 (42%), Gaps = 14/278 (5%)
Query: 28 ASNVEVLILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVALK 87
S V + KAT H+ ++++D ++Q V A + +R + +W+V K
Sbjct: 19 GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNS-SWVVVFK 77
Query: 88 SLMLVLRIFQDGDPYFPREVAHAMKRGQKFLNLSNFRDDSNSSPWDYTAFVRTFALYLDE 147
SL+ + G+ F + + R F NLSNF D S +D + F+R ++ YL+E
Sbjct: 78 SLITTHHLMVYGNERF---IQYLASRNTLF-NLSNFLDKSGLQGYDMSTFIRRYSRYLNE 133
Query: 148 RLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEMKPIMLLDRISNWQRLLDRAIGSKPTG 207
+ + ++ F+ R + R+ M LL + Q +D +
Sbjct: 134 KAVSY--RQVAFDFTKVKRGADGVMRT------MNTEKLLKTVPIIQNQMDALLDFNVNS 185
Query: 208 AAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQFE 267
N ++ + + +++ L+ ++ + LL+ +F ++ + C K +
Sbjct: 186 NELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMT 245
Query: 268 ELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFL 305
+S F + + G+ R + P + + L++ L++ L
Sbjct: 246 RISEFLKVAEQVGIDR-GDIPDLSQAPSSLLDALEQHL 282
>sp|P53309|AP18B_YEAST Clathrin coat assembly protein AP180B OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1802 PE=1 SV=1
Length = 568
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 124/282 (43%), Gaps = 28/282 (9%)
Query: 34 LILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVALKSLMLVL 93
L+ AT+ AP ++YVD IL +S++ + R+ T W + K+L+++
Sbjct: 8 LVKGATKIKMAPPKQKYVDPILSGTSSARGLQ-EITHALDIRLSDTA-WTIVYKALIVLH 65
Query: 94 RIFQDGDPYFPREVAHAMKRGQKFLNLSNFRDDSNSSPW---DYTAFVRTFALYLDERLD 150
+ Q G+ ++V ++ L++ R S+++ W D A R + YL R
Sbjct: 66 LMIQQGE----KDVT--LRHYSHNLDVFQLRKISHTTKWSSNDMRALQR-YDEYLKTR-- 116
Query: 151 CFITGKLHKRFSNRGRRNGRIERSYAPVCEMKPIML---LDRISNWQRLLDRAIGSKPTG 207
C G+L G + R S + + + LD + + + ++ I +K +
Sbjct: 117 CEEYGRL-------GMDHLRDNYSSLKLGSKNQLSMDEELDHVESLEIQINALIRNKYSV 169
Query: 208 AAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQFE 267
+ N L+ + +VQ+ LY +++ + LL+SFF L + E
Sbjct: 170 SDLENHLLLYAFQLLVQDLLGLYNALNEGVITLLESFFELSIEHAKRTLDLYKDFVDMTE 229
Query: 268 ELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFLKDQA 309
+ + + K G+ + P ++ ++ +LI +L+E L+++
Sbjct: 230 YVVRYLKIGKAVGL----KIPVIKHITTKLINSLEEHLREET 267
>sp|Q8H0W9|CAP17_ARATH Putative clathrin assembly protein At5g10410 OS=Arabidopsis
thaliana GN=At5g10410 PE=2 SV=2
Length = 338
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 1 MPSKLKKAIGAVKDQTSISLAKVSNANASN----VEVLILKAT-RHDEAPLDERYVDEIL 55
MP IG KD+ SI A++ ++ S + + +LK+T R P + YV ++
Sbjct: 1 MPGLKTHIIGKFKDKASIGKARLVHSFGSTAVKYIHLALLKSTTRTPNKPPNSDYVSAVI 60
Query: 56 QLIASSKVYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQDGDPYFPREVAHAMKRGQ 115
S+ YA A R+ T+N IVA KSL+++ ++ + R+ + G+
Sbjct: 61 SY--SNSRYAPAAFSAALWRLRVTKNAIVATKSLIVIHKLIKSS-----RDKFEGLGHGR 113
Query: 116 KFLNLSNFRDDSNSSPWDYTAFVRTFALYLD 146
L L+ F D S++ + + ++R + YLD
Sbjct: 114 NNLKLNEFSDKSSNLTLELSQWIRWYGQYLD 144
>sp|Q9VI75|PICA_DROME Phosphatidylinositol-binding clathrin assembly protein LAP
OS=Drosophila melanogaster GN=lap PE=1 SV=3
Length = 468
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 112/278 (40%), Gaps = 16/278 (5%)
Query: 35 ILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVALKSLMLVLR 94
+ KAT + ++++D ++ V A ++ +R + NW+V KSL+
Sbjct: 28 VCKATTEECIGPKKKHLDYLVHCTNEPNVSIPHLANLLIER-SQNANWVVVYKSLITTHH 86
Query: 95 IFQDGDPYFPREVA--HAMKRGQKFLNLSNFRDDSNSSP-----WDYTAFVRTFALYLDE 147
+ G+ F + +A ++ FL+ +D P +D + F+R +A YL+E
Sbjct: 87 LMAYGNERFMQYLASSNSTFNLSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRRYAKYLNE 146
Query: 148 RLDCFITGKLHKRFSNRGRRNGRIERSYAPVCEMKPIMLLDRISNWQRLLDRAIGSKPTG 207
+ + RG+ G + M LL + Q LD +
Sbjct: 147 KSLSYRAMAFDFCKVKRGKEEGSLR-------SMNAEKLLKTLPVLQAQLDALLEFDCQS 199
Query: 208 AAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKASKQFE 267
+N ++ +S + ++ L+ +D + LL+ +F + + A K + +
Sbjct: 200 NDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKFLVRMD 259
Query: 268 ELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFL 305
+ F + + G+ + + P + K L++ L++ L
Sbjct: 260 RVGEFLKVAENVGIDK-GDIPDLTKAPSSLLDALEQHL 296
>sp|A9X7L0|ANMT_RUTGR Anthranilate N-methyltransferase OS=Ruta graveolens PE=1 SV=1
Length = 364
Score = 36.2 bits (82), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 242 DSFFHLQYHNCVSAFQACVKASKQFEELSSFYDLCKGTGVGRT---SEYPSVQKVSEELI 298
D++ +++ A + ++ K FE ++ D+ G GV + S+YP +Q ++ +L
Sbjct: 175 DTYHRAMFNHSTIALKRILEHYKGFENVTKLVDVGGGLGVTLSMIASKYPHIQAINFDLP 234
Query: 299 ETLQEFLKDQASFPAANGRSALMLPATPIKD 329
+Q D AS+P M + P D
Sbjct: 235 HVVQ----DAASYPGVEHVGGNMFESVPEGD 261
>sp|O60167|YHC3_SCHPO ENTH domain-containing protein C19F8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC19F8.03c PE=1
SV=1
Length = 649
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/285 (17%), Positives = 110/285 (38%), Gaps = 34/285 (11%)
Query: 32 EVLILKATRHDEAPLDERYVDEILQLIASSKVYAVACAQVISKRIGKTRNWIVALKSLML 91
E + KAT+ A ++V+ IL+ Q + +R+ K ++W + K+L++
Sbjct: 11 ERAVKKATKVKLAAPKYKHVEIILEATTEDPETLENVIQALCERL-KEQSWTIVFKTLIV 69
Query: 92 VLRIFQDGDPYFPREVAHAMKRGQKFLNLSNFRDDSNSSPWDYTAFVRTFALYLDERLDC 151
+ ++G P R + L S+ + ++Y+ F+
Sbjct: 70 FHVMLKEGAPNTTIVALSQRPRILEVLKASSLLAQGKNI-YNYSRFL------------- 115
Query: 152 FITGKLHKRFSNRGRRNGRIERSYAPVC--------EMK-PIMLLDRISNWQRLLDRAIG 202
S R ++ GR+ YA V EMK LL + Q L R I
Sbjct: 116 ----------SERAKQYGRLGVDYAQVGDAPKKKIREMKLENGLLRNVEGIQAQLRRLIK 165
Query: 203 SKPTGAAKNNSLVQVSLYAIVQESFDLYRDISDALALLLDSFFHLQYHNCVSAFQACVKA 262
+ +N + + +V + L++ ++ + +L+ +F + +H+ + +
Sbjct: 166 CQFVAEEIDNDIAITAFRLLVGDLLVLFKAVNIGVINVLEHYFEMGHHDAAQSLRIYKTF 225
Query: 263 SKQFEELSSFYDLCKGTGVGRTSEYPSVQKVSEELIETLQEFLKD 307
Q E++ ++ + P+++ L +L+E+L D
Sbjct: 226 VNQTEDIINYLSTARSLEFVTKFPVPNIKHAPISLTASLEEYLND 270
>sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing protein 2 OS=Homo
sapiens GN=GIGYF2 PE=1 SV=1
Length = 1299
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 323 PATPIKDPGSSSDRVGLSSSLAIVPATNAFSVAPTFSAQNPSQGGTTFENKDDP 376
P K G +DRVG+ +S P T++ S P + + SQ + FE KD+P
Sbjct: 348 PDKTNKKEGEKTDRVGVEASEE-TPQTSSSSARPGTPSDHQSQEASQFERKDEP 400
>sp|Q9FKQ2|CAP18_ARATH Putative clathrin assembly protein At5g65370 OS=Arabidopsis
thaliana GN=At5g65370 PE=3 SV=1
Length = 295
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 34/249 (13%)
Query: 4 KLKKAIGAVKDQTSISLAKV----SNANASNVEVLILKATRH-DEAPLDERYVDEILQLI 58
KL G +KD+ S V S+ NA +++ +LKAT H P ++YV + I
Sbjct: 3 KLATLNGILKDEASQMKLNVVHLCSSVNAKTIDLALLKATSHTSNNPPSDKYVTFLQSTI 62
Query: 59 ASSKVYAVACAQVISKRIGKTRNWIVALKSLMLVLRIFQ-----DGDPYFPREVAH---A 110
+ Y I R+ T + VA K L+L+ ++ + +G+ + H
Sbjct: 63 DTC--YGPDTVDAILHRLRVTTDVCVAAKCLILLHKMVKSESGYNGEDSLRNNINHRTLI 120
Query: 111 MKRGQKFLNLSNFRDDSNSSPWDYTAFVRTFALYLDERLDCF--------ITGKLHKRFS 162
+G L L++ +S+ + T +V+ + Y LDC+ IT + ++
Sbjct: 121 YTQGGSNLKLNDLNVNSSRFTRELTPWVQWYKQY----LDCYLSIAEVLGITPNIKEKNE 176
Query: 163 NRGRRNGRIERSYAPVCEMKPIMLLDRISNWQRLLDRAIGSKPTGAAKNNSLVQVSLYAI 222
++ R+ SY C +K I L + ++ + DR + +K N +V +
Sbjct: 177 DKRLETQRVS-SYPMDCILKQIDFL--VELFEHISDRPKAPQ----SKLNKIVIEMTELM 229
Query: 223 VQESFDLYR 231
VQ+ F R
Sbjct: 230 VQDYFSAIR 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,453,991
Number of Sequences: 539616
Number of extensions: 6028190
Number of successful extensions: 14471
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 14396
Number of HSP's gapped (non-prelim): 45
length of query: 419
length of database: 191,569,459
effective HSP length: 120
effective length of query: 299
effective length of database: 126,815,539
effective search space: 37917846161
effective search space used: 37917846161
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)