BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039344
(873 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 166/567 (29%), Positives = 241/567 (42%), Gaps = 85/567 (14%)
Query: 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIP- 62
+ +N+ IP L + +L L++ NKLSG ++ T L L I +N G IP
Sbjct: 204 VSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP 262
Query: 63 -----------------GEIGNF-----RFFSDLELSNNKLSGSIPPSLGNLSNLATLYL 100
GEI +F + L+LS N G++PP G+ S L +L L
Sbjct: 263 LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 322
Query: 101 DTNSLSNSIPSEXXXXXXXXXXXXXXXXX-XXXXPHSLGNLT-NLATLYIYSNSLSASIL 158
+N+ S +P + P SL NL+ +L TL + SN+ S IL
Sbjct: 323 SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL 382
Query: 159 GKIGN--LKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPXXXXXXXXXX 216
+ +L L L N F G IPP+L N S L +L+L
Sbjct: 383 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHL-------------------- 422
Query: 217 XXXXXYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGP 276
+N LSG+IP S+G+LS L L L+ N L G IP E + L L+L N G
Sbjct: 423 ----SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGE 478
Query: 277 IPI-LRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLS 335
IP L N T+L + L N LTG I + NL + LS N+F G I ++ G C L
Sbjct: 479 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLI 538
Query: 336 TLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPI--------------------- 374
LD + N G +P + S +++N I G+ +
Sbjct: 539 WLDLNTNLFNGTIPAAMFKQSG----KIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ 594
Query: 375 -----ELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLEL 429
+L +L+ + G SP + + LD+S N LS IPK +G++
Sbjct: 595 GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPY 654
Query: 430 IHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNE 489
+ + L+L N + +IP ++ ++ L L+LS N L G IP + L ID+S N
Sbjct: 655 LFI--LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 712
Query: 490 LRGSIPNSTTFKDAPIEALQGNKGLYG 516
L G IP F+ P N GL G
Sbjct: 713 LSGPIPEMGQFETFPPAKFLNNPGLCG 739
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 156/513 (30%), Positives = 227/513 (44%), Gaps = 55/513 (10%)
Query: 22 SLSDLELGNNKLSGSIP--HSLGNLTNLATLYIHTNSLSGSIPGEI-GNFRFFS--DLEL 76
SL+ L+L N LSG + SLG+ + L L + +N+L PG++ G + S L+L
Sbjct: 98 SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDL 155
Query: 77 SNNKLSGS------IPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXXXXXXX 130
S N +SG+ + G L +LA + N +S + +
Sbjct: 156 SANSISGANVVGWVLSDGCGELKHLA---ISGNKISGDV--DVSRCVNLEFLDVSSNNFS 210
Query: 131 XXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSN 190
P LG+ + L L I N LS I L L +S N F G IPP
Sbjct: 211 TGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP------- 262
Query: 191 LATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISM-GNLSNLTYLNLFENSL 249
L SL Y NK +G IP + G LT L+L N
Sbjct: 263 -----LPLKSLQY--------------LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHF 303
Query: 250 SGAIPYEYRNLVKLTILLLGHNQFRGPIPI--LRNLTSLERVRLDRNYLTGNISESFY-I 306
GA+P + + L L L N F G +P+ L + L+ + L N +G + ES +
Sbjct: 304 YGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 363
Query: 307 YPNLTYIDLSQNNFYGEISSDWGRCPK--LSTLDFSINNITGNVPPEIGHSSQLGVLDLS 364
+L +DLS NNF G I + + PK L L N TG +PP + + S+L L LS
Sbjct: 364 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 423
Query: 365 SNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSL 424
N++ G IP LG L+ L L N L G++ +L + LE L L N L+ IP L
Sbjct: 424 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
Query: 425 GNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHID 484
N +L+ + LS N L IP I +++L L LS+NS SG IP+ L+ +D
Sbjct: 484 SN--CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLD 541
Query: 485 ISYNELRGSIPNSTTFKDAPIEA--LQGNKGLY 515
++ N G+IP + + I A + G + +Y
Sbjct: 542 LNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 574
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 122/285 (42%), Gaps = 55/285 (19%)
Query: 267 LLGHNQFRGPIPILRNLTSLERVRLDRNYLTG-----------------NISESFYIYP- 308
L ++ G + + SL + L RN L+G N+S + +P
Sbjct: 80 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPG 139
Query: 309 ---------NLTYIDLSQNNFYGEISSDW---GRCPKLSTLDFSINNITGNVPPEIGHSS 356
+L +DLS N+ G W C +L L S N I+G+V ++
Sbjct: 140 KVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCV 197
Query: 357 QLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRL 416
L LD+SSN+ IP LG + L ++ N+LSG S + + +L+ L++SSN+
Sbjct: 198 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 417 SNSIP----KSLGNLELIH-----------------LSELDLSRNFLREAIPSQICIMQS 455
IP KSL L L L+ LDLS N A+P
Sbjct: 257 VGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 316
Query: 456 LEKLNLSHNSLSGLIP-SCFEKMNGLLHIDISYNELRGSIPNSTT 499
LE L LS N+ SG +P KM GL +D+S+NE G +P S T
Sbjct: 317 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLT 361
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 2 PCIYNNSLYDSIPS-ELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGS 60
PC + +Y S N S+ L++ N LSG IP +G++ L L + N +SGS
Sbjct: 609 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGS 668
Query: 61 IPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIP 110
IP E+G+ R + L+LS+NKL G IP ++ L+ L + L N+LS IP
Sbjct: 669 IPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 166/567 (29%), Positives = 241/567 (42%), Gaps = 85/567 (14%)
Query: 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIP- 62
+ +N+ IP L + +L L++ NKLSG ++ T L L I +N G IP
Sbjct: 207 VSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP 265
Query: 63 -----------------GEIGNF-----RFFSDLELSNNKLSGSIPPSLGNLSNLATLYL 100
GEI +F + L+LS N G++PP G+ S L +L L
Sbjct: 266 LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 325
Query: 101 DTNSLSNSIPSEXXXXXXXXXXXXXXXXX-XXXXPHSLGNLT-NLATLYIYSNSLSASIL 158
+N+ S +P + P SL NL+ +L TL + SN+ S IL
Sbjct: 326 SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL 385
Query: 159 GKIGN--LKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPXXXXXXXXXX 216
+ +L L L N F G IPP+L N S L +L+L
Sbjct: 386 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHL-------------------- 425
Query: 217 XXXXXYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGP 276
+N LSG+IP S+G+LS L L L+ N L G IP E + L L+L N G
Sbjct: 426 ----SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGE 481
Query: 277 IPI-LRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLS 335
IP L N T+L + L N LTG I + NL + LS N+F G I ++ G C L
Sbjct: 482 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLI 541
Query: 336 TLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPI--------------------- 374
LD + N G +P + S +++N I G+ +
Sbjct: 542 WLDLNTNLFNGTIPAAMFKQSG----KIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ 597
Query: 375 -----ELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLEL 429
+L +L+ + G SP + + LD+S N LS IPK +G++
Sbjct: 598 GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPY 657
Query: 430 IHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNE 489
+ + L+L N + +IP ++ ++ L L+LS N L G IP + L ID+S N
Sbjct: 658 LFI--LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 715
Query: 490 LRGSIPNSTTFKDAPIEALQGNKGLYG 516
L G IP F+ P N GL G
Sbjct: 716 LSGPIPEMGQFETFPPAKFLNNPGLCG 742
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 156/513 (30%), Positives = 227/513 (44%), Gaps = 55/513 (10%)
Query: 22 SLSDLELGNNKLSGSIP--HSLGNLTNLATLYIHTNSLSGSIPGEI-GNFRFFS--DLEL 76
SL+ L+L N LSG + SLG+ + L L + +N+L PG++ G + S L+L
Sbjct: 101 SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDL 158
Query: 77 SNNKLSGS------IPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXXXXXXX 130
S N +SG+ + G L +LA + N +S + +
Sbjct: 159 SANSISGANVVGWVLSDGCGELKHLA---ISGNKISGDV--DVSRCVNLEFLDVSSNNFS 213
Query: 131 XXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSN 190
P LG+ + L L I N LS I L L +S N F G IPP
Sbjct: 214 TGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP------- 265
Query: 191 LATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISM-GNLSNLTYLNLFENSL 249
L SL Y NK +G IP + G LT L+L N
Sbjct: 266 -----LPLKSLQY--------------LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHF 306
Query: 250 SGAIPYEYRNLVKLTILLLGHNQFRGPIPI--LRNLTSLERVRLDRNYLTGNISESFY-I 306
GA+P + + L L L N F G +P+ L + L+ + L N +G + ES +
Sbjct: 307 YGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 366
Query: 307 YPNLTYIDLSQNNFYGEISSDWGRCPK--LSTLDFSINNITGNVPPEIGHSSQLGVLDLS 364
+L +DLS NNF G I + + PK L L N TG +PP + + S+L L LS
Sbjct: 367 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426
Query: 365 SNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSL 424
N++ G IP LG L+ L L N L G++ +L + LE L L N L+ IP L
Sbjct: 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
Query: 425 GNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHID 484
N +L+ + LS N L IP I +++L L LS+NS SG IP+ L+ +D
Sbjct: 487 SN--CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLD 544
Query: 485 ISYNELRGSIPNSTTFKDAPIEA--LQGNKGLY 515
++ N G+IP + + I A + G + +Y
Sbjct: 545 LNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 577
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 122/285 (42%), Gaps = 55/285 (19%)
Query: 267 LLGHNQFRGPIPILRNLTSLERVRLDRNYLTG-----------------NISESFYIYP- 308
L ++ G + + SL + L RN L+G N+S + +P
Sbjct: 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPG 142
Query: 309 ---------NLTYIDLSQNNFYGEISSDW---GRCPKLSTLDFSINNITGNVPPEIGHSS 356
+L +DLS N+ G W C +L L S N I+G+V ++
Sbjct: 143 KVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCV 200
Query: 357 QLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRL 416
L LD+SSN+ IP LG + L ++ N+LSG S + + +L+ L++SSN+
Sbjct: 201 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 417 SNSIP----KSLGNLELIH-----------------LSELDLSRNFLREAIPSQICIMQS 455
IP KSL L L L+ LDLS N A+P
Sbjct: 260 VGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319
Query: 456 LEKLNLSHNSLSGLIP-SCFEKMNGLLHIDISYNELRGSIPNSTT 499
LE L LS N+ SG +P KM GL +D+S+NE G +P S T
Sbjct: 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLT 364
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 2 PCIYNNSLYDSIPS-ELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGS 60
PC + +Y S N S+ L++ N LSG IP +G++ L L + N +SGS
Sbjct: 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGS 671
Query: 61 IPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIP 110
IP E+G+ R + L+LS+NKL G IP ++ L+ L + L N+LS IP
Sbjct: 672 IPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 156/290 (53%), Gaps = 19/290 (6%)
Query: 596 EIIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLP--GEMTFQQEFLNEVK 653
E+ A+++F +++ +G+GG G VY +LA G ++AVK+ GE+ FQ EV+
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ----TEVE 87
Query: 654 ALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKN-LGWTRRMNMIKG 712
++ HRN++++ GFC+ +VY Y S+A L ++ L W +R + G
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK-PDSSNWTELAGTY 771
L+Y+H+ C P I+HRD+ + N+LLD E EA V DFG+AK + D + GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNL---------NI 822
G++APE T K +EK DV+ +GV+ LE+I G+ D + + L
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L+ ++D L ++ +++ +++V + C +P RP M +V ++L+
Sbjct: 268 KLEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 155/290 (53%), Gaps = 19/290 (6%)
Query: 596 EIIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLP--GEMTFQQEFLNEVK 653
E+ A+++F +++ +G+GG G VY +LA G ++AVK+ GE+ FQ EV+
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ----TEVE 79
Query: 654 ALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKN-LGWTRRMNMIKG 712
++ HRN++++ GFC+ +VY Y S+A L ++ L W +R + G
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK-PDSSNWTELAGTY 771
L+Y+H+ C P I+HRD+ + N+LLD E EA V DFG+AK + D + G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNL---------NI 822
G++APE T K +EK DV+ +GV+ LE+I G+ D + + L
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L+ ++D L ++ +++ +++V + C +P RP M +V ++L+
Sbjct: 260 KLEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 24/281 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
ATN+FD + IG G G VY L G +A+K+ P +EF E++ L+
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR---RTPESSQGIEEFETEIETLSFCR 93
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVIL-SNDAAAKNLGWTRRMNMIKGIVDALS 718
H ++V + GFC + ++Y+Y + +L L +D ++ W +R+ + G L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTEL----AGTYGYV 774
Y+H I+HRD+ S N+LLD ++DFGI+K K + T L GT GY+
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGYI 208
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKH------PRDFI--SSMSFSSLNLNIALDE 826
PE ++TEK DVYSFGV+ EV+ + PR+ + + + S N N L++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN-NGQLEQ 267
Query: 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
++DP L R + L + + C+ + E RP+M V
Sbjct: 268 IVDPNLADKIRP--ESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 24/281 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
ATN+FD + IG G G VY L G +A+K+ P +EF E++ L+
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR---RTPESSQGIEEFETEIETLSFCR 93
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVIL-SNDAAAKNLGWTRRMNMIKGIVDALS 718
H ++V + GFC + ++Y+Y + +L L +D ++ W +R+ + G L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTEL----AGTYGYV 774
Y+H I+HRD+ S N+LLD ++DFGI+K K T L GT GY+
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYI 208
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKH------PRDFI--SSMSFSSLNLNIALDE 826
PE ++TEK DVYSFGV+ EV+ + PR+ + + + S N N L++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN-NGQLEQ 267
Query: 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
++DP L R + L + + C+ + E RP+M V
Sbjct: 268 IVDPNLADKIRP--ESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 136/298 (45%), Gaps = 35/298 (11%)
Query: 586 LTFEGKIIYEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVK-----KFHSPLPG 640
L F+G + +++ D + + IG G G+V+ ++ G +AVK FH+
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA---- 75
Query: 641 EMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKN 700
EFL EV + + H NIV G +L IV EY SL +L A +
Sbjct: 76 --ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133
Query: 701 LGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760
L RR++M + ++Y+HN PPIVHRD+ S N+L+D + V DFG+++
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASX 192
Query: 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH------PRDFISSMS 814
AGT ++APE+ EK DVYSFGV+ E+ + P ++++
Sbjct: 193 FLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG 252
Query: 815 FSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
F L I RN++ ++ +I+E C P RP+ + LL+
Sbjct: 253 FKCKRLEI-------------PRNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 586 LTFEGKIIYEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVK-----KFHSPLPG 640
L F+G + +++ D + + IG G G+V+ ++ G +AVK FH+
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA---- 75
Query: 641 EMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKN 700
EFL EV + + H NIV G +L IV EY SL +L A +
Sbjct: 76 --ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133
Query: 701 LGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760
L RR++M + ++Y+HN PPIVHR++ S N+L+D + V DFG+++
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192
Query: 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH------PRDFISSMS 814
+ AGT ++APE+ EK DVYSFGV+ E+ + P ++++
Sbjct: 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG 252
Query: 815 FSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
F L I RN++ ++ +I+E C P RP+ + LL+
Sbjct: 253 FKCKRLEI-------------PRNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 141/295 (47%), Gaps = 25/295 (8%)
Query: 594 YEEIIRATNDFDDE------HCIGKGGQGSVYMSKLASGEIIAVKKFHSPLP-GEMTFQQ 646
+ E+ TN+FD+ + +G+GG G VY + + +AVKK + + +Q
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 75
Query: 647 EFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
+F E+K + + H N+V++ GF L +VY Y SL LS L W R
Sbjct: 76 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 135
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--W 764
+ +G + ++++H + +HRDI S N+LLD A +SDFG+A+ + +
Sbjct: 136 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFISSMSFSS 817
+ + GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ +
Sbjct: 193 SRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE 251
Query: 818 LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
D +D ++ + + S+ C+ E RP ++KV QLL+
Sbjct: 252 DEEKTIED-YIDKKMNDADSTSVEAMYSVAS---QCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 140/295 (47%), Gaps = 25/295 (8%)
Query: 594 YEEIIRATNDFDDE------HCIGKGGQGSVYMSKLASGEIIAVKKFHSPLP-GEMTFQQ 646
+ E+ TN+FD+ + +G+GG G VY + + +AVKK + + +Q
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 75
Query: 647 EFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
+F E+K + + H N+V++ GF L +VY Y SL LS L W R
Sbjct: 76 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 135
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--W 764
+ +G + ++++H + +HRDI S N+LLD A +SDFG+A+ + +
Sbjct: 136 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFISSMSFSS 817
+ GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ +
Sbjct: 193 XRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE 251
Query: 818 LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
D +D ++ + + S+ C+ E RP ++KV QLL+
Sbjct: 252 DEEKTIED-YIDKKMNDADSTSVEAMYSVAS---QCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 140/295 (47%), Gaps = 25/295 (8%)
Query: 594 YEEIIRATNDFDDE------HCIGKGGQGSVYMSKLASGEIIAVKKFHSPLP-GEMTFQQ 646
+ E+ TN+FD+ + +G+GG G VY + + +AVKK + + +Q
Sbjct: 11 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 69
Query: 647 EFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
+F E+K + + H N+V++ GF L +VY Y SL LS L W R
Sbjct: 70 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 129
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--W 764
+ +G + ++++H + +HRDI S N+LLD A +SDFG+A+ + +
Sbjct: 130 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMX 186
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFISSMSFSS 817
+ GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ +
Sbjct: 187 XRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE 245
Query: 818 LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
D +D ++ + + S+ C+ E RP ++KV QLL+
Sbjct: 246 DEEKTIED-YIDKKMNDADSTSVEAMYSVAS---QCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 25/295 (8%)
Query: 594 YEEIIRATNDFDDE------HCIGKGGQGSVYMSKLASGEIIAVKKFHSPLP-GEMTFQQ 646
+ E+ TN+FD+ + G+GG G VY + + +AVKK + + +Q
Sbjct: 8 FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 66
Query: 647 EFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
+F E+K + H N+V++ GF L +VY Y SL LS L W R
Sbjct: 67 QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXR 126
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK--PDSSNW 764
+ +G + ++++H + +HRDI S N+LLD A +SDFG+A+ +
Sbjct: 127 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX 183
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFISSMSFSS 817
+ + GT Y APE A ++T K D+YSFGV+ LE+I G + P+ +
Sbjct: 184 SRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE 242
Query: 818 LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
D + S +V + V C+ E RP ++KV QLL+
Sbjct: 243 DEEKTIEDYIDKKXNDADSTSVE----AXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 38/281 (13%)
Query: 610 IGKGGQG-SVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKG G ++ ++ +GE++ +K+ + + Q+ FL EVK + + H N++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKEL---IRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ L + EY K +L +I S D+ W++R++ K I ++Y+H+
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHS---MN 128
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFL--------------KPDSSNWTELAGTYGY 773
I+HRD++S N L+ V+DFG+A+ + KPD + G +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFISSMSFSSLNLNIALDEMLDPR 831
+APE+ EK DV+SFG++ E+I P +M F LN+ LD P
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-GLNVRGFLDRYCPPN 247
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
P S +T+ C D +PE RP+ K+ L+
Sbjct: 248 CPP----------SFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 96.7 bits (239), Expect = 5e-20, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V + K +AVK G M+ + EF E + + ++ H +VK YG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE---GSMS-EDEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 670 CLHVRHLFIVYEYFKM-CSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
C ++IV EY C L + S+ K L ++ + M + + ++++ + F
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESHQF--- 125
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVT 785
+HRD++++N L+D + VSDFG+ +++ D + GT + APE+ + K +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD--QYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 786 EKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
K DV++FG+L EV GK P D + N + L RL P H
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDLYT-------NSEVVLKVSQGHRLYRP----HLASD 232
Query: 845 SIVEVTISCVDENPESRPTMQKV 867
+I ++ SC E PE RPT Q++
Sbjct: 233 TIYQIMYSCWHELPEKRPTFQQL 255
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 140/285 (49%), Gaps = 30/285 (10%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKF---HSPLPGEMTFQ-QEFLNEVKA 654
A N+ + E IGKGG G V+ +L + ++A+K S EM + QEF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 655 LTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
++ + H NIVK+YG + + V E+ L L + A + W+ ++ ++ I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENE-----AHVSDFGIAKFLKPDSSNWTELAG 769
+ YM N PPIVHRD+ S N+ L +E A V+DFG+++ + + L G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---QSVHSVSGLLG 188
Query: 770 TYGYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLN-LNIALDE 826
+ ++APE A TEK D YSF ++ ++ G+ P D S+ + +N+ +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---EYSYGKIKFINMIREE 245
Query: 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
L P +P + +L +++E+ C +P+ RP + + L
Sbjct: 246 GLRPTIP---EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 92.8 bits (229), Expect = 7e-19, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS TEL GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEM 177
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 235 DLISRLLK----------HNPSQRPMLREVLE 256
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 92.8 bits (229), Expect = 7e-19, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 24/273 (8%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
E IG GG G VY + E+ H P + E K + H NI+ +
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 667 YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
G CL +L +V E+ + L +LS ++ +N I ++Y+H++
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI----LVNWAVQIARGMNYLHDEAIV 127
Query: 727 PIVHRDISSKNVLL-------DFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
PI+HRD+ S N+L+ D N+ ++DFG+A+ + + AG Y ++APE+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYAWMAPEV 185
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838
++ DV+S+GVL E++ G+ P I ++ + +A++++ LP PS
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA---YGVAMNKL---ALPIPS-T 238
Query: 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
+ ++E C + +P SRP+ + L
Sbjct: 239 CPEPFAKLME---DCWNPDPHSRPSFTNILDQL 268
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 30/285 (10%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKF---HSPLPGEMTFQ-QEFLNEVKA 654
A N+ + E IGKGG G V+ +L + ++A+K S EM + QEF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 655 LTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
++ + H NIVK+YG + + V E+ L L + A + W+ ++ ++ I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENE-----AHVSDFGIAKFLKPDSSNWTELAG 769
+ YM N PPIVHRD+ S N+ L +E A V+DFG ++ + + L G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---QSVHSVSGLLG 188
Query: 770 TYGYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLN-LNIALDE 826
+ ++APE A TEK D YSF ++ ++ G+ P D S+ + +N+ +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---EYSYGKIKFINMIREE 245
Query: 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
L P +P + +L +++E+ C +P+ RP + + L
Sbjct: 246 GLRPTIP---EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T+L GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 182
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 239
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 240 DLISRLLK----------HNPSQRPMLREVLE 261
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.0 bits (227), Expect = 1e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T+L GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 235 DLISRLLK----------HNPSQRPMLREVLE 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T+L GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 235 DLISRLLK----------HNPSQRPMLREVLE 256
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 21/203 (10%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQE-----FLNEVKALTEIWHRNI 663
IG+G G+VY + +A+G+ +A++ +M QQ+ +NE+ + E + NI
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
V L L++V EY SL +++ + + + + + AL ++H++
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAVCRECLQALEFLHSN 135
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 783
++HRDI S N+LL + ++DFG + P+ S +E+ GT ++APE+
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKA 192
Query: 784 VTEKCDVYSFGVLALEVIKGKHP 806
K D++S G++A+E+I+G+ P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T+L GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 178
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 235
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 236 DLISRLLK----------HNPSQRPMLREVLE 257
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + SS T L+GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEM 178
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 235
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 236 DLISRLLK----------HNPSQRPMLREVLE 257
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 203
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 260
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 261 DLISRLLK----------HNPSQRPMLREVLE 282
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 194
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 251
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 252 DLISRLLK----------HNPSQRPMLREVLE 273
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 237
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 238 DLISRLLK----------HNPSQRPMLREVLE 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEM 177
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 235 DLISRLLK----------HNPSQRPMLREVLE 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 181
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 238
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 239 DLISRLLK----------HNPSQRPMLREVLE 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 176
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 233
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 234 DLISRLLK----------HNPSQRPMLREVLE 255
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 30/285 (10%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKF---HSPLPGEMTFQ-QEFLNEVKA 654
A N+ + E IGKGG G V+ +L + ++A+K S EM + QEF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 655 LTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
++ + H NIVK+YG + + V E+ L L + A + W+ ++ ++ I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENE-----AHVSDFGIAKFLKPDSSNWTELAG 769
+ YM N PPIVHRD+ S N+ L +E A V+DF +++ + + L G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---QSVHSVSGLLG 188
Query: 770 TYGYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLN-LNIALDE 826
+ ++APE A TEK D YSF ++ ++ G+ P D S+ + +N+ +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---EYSYGKIKFINMIREE 245
Query: 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
L P +P + +L +++E+ C +P+ RP + + L
Sbjct: 246 GLRPTIP---EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 239
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 240 DLISRLLK----------HNPSQRPMLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.5 bits (223), Expect = 4e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 237
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 238 DLISRLLK----------HNPSQRPMLREVLE 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.5 bits (223), Expect = 4e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 177
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 235 DLISRLLK----------HNPSQRPMLREVLE 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 90.1 bits (222), Expect = 4e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 231
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 232 DLISRLLK----------HNPSQRPMLREVLE 253
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS +L GT Y+ PE+
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 203
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 260
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 261 DLISRLLK----------HNPSQRPMLREVLE 282
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 89.7 bits (221), Expect = 6e-18, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEX 182
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 239
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 240 DLISRLLK----------HNPSQRPXLREVLE 261
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 89.4 bits (220), Expect = 8e-18, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS +L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 180
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 237
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 238 DLISRLLK----------HNPSQRPMLREVLE 259
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 21/203 (10%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQE-----FLNEVKALTEIWHRNI 663
IG+G G+VY + +A+G+ +A++ +M QQ+ +NE+ + E + NI
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
V L L++V EY SL +++ + + + + + AL ++H++
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAVCRECLQALEFLHSN 135
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 783
++HRDI S N+LL + ++DFG + P+ S + + GT ++APE+
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192
Query: 784 VTEKCDVYSFGVLALEVIKGKHP 806
K D++S G++A+E+I+G+ P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 89.4 bits (220), Expect = 9e-18, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 235 DLISRLLK----------HNPSQRPMLREVLE 256
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E +++FG + + SS T L GT Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 179
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 236
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 237 DLISRLLK----------HNPSQRPMLREVLE 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 180
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 237
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 238 DLISRLLK----------HNPSQRPMLREVLE 259
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 21/203 (10%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQE-----FLNEVKALTEIWHRNI 663
IG+G G+VY + +A+G+ +A++ +M QQ+ +NE+ + E + NI
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
V L L++V EY SL +++ + + + + + AL ++H++
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAVCRECLQALEFLHSN 135
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 783
++HRDI S N+LL + ++DFG + P+ S + + GT ++APE+
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 192
Query: 784 VTEKCDVYSFGVLALEVIKGKHP 806
K D++S G++A+E+I+G+ P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 21/203 (10%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQE-----FLNEVKALTEIWHRNI 663
IG+G G+VY + +A+G+ +A++ +M QQ+ +NE+ + E + NI
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
V L L++V EY SL +++ + + + + + AL ++H++
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAVCRECLQALEFLHSN 136
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 783
++HRDI S N+LL + ++DFG + P+ S + + GT ++APE+
Sbjct: 137 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 193
Query: 784 VTEKCDVYSFGVLALEVIKGKHP 806
K D++S G++A+E+I+G+ P
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 177
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 235 DLISRLLK----------HNPSQRPMLREVLE 256
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + + I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQDTYKRISRVEFTFPDFVTEGAR 234
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 235 DLISRLLK----------HNPSQRPMLREVLE 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 180
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 237
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 238 DLISRLLK----------HNPSQRPMLREVLE 259
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E +++FG + + SS T L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 237
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 238 DLISRLLK----------HNPSQRPMLREVLE 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 179
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 236
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 237 DLISRLLK----------HNPSQRPMLREVLE 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 34/270 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G V++ + + +A+K G M+ +++F+ E + + ++ H +V++YG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS-EEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
CL + +V+E+ + L+ L AA+ L + M + + ++Y+ C
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 121
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMK 783
++HRD++++N L+ VSDFG+ +F+ D +T GT + +PE+ +
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 178
Query: 784 VTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALD-EMLDPRLPTPSRNVHD 841
+ K DV+SFGVL EV +GK P + + S S + +I+ + PRL +
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS------- 228
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLL 871
+ ++ C E PE RP ++ + L
Sbjct: 229 --THVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 34/270 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G V++ + + +A+K G M+ +++F+ E + + ++ H +V++YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS-EEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
CL + +V+E+ + L+ L AA+ L + M + + ++Y+ C
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 123
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMK 783
++HRD++++N L+ VSDFG+ +F+ D +T GT + +PE+ +
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 180
Query: 784 VTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALD-EMLDPRLPTPSRNVHD 841
+ K DV+SFGVL EV +GK P + + S S + +I+ + PRL +
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS------- 230
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLL 871
+ ++ C E PE RP ++ + L
Sbjct: 231 --THVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY L + R I + +ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEM 178
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 235
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 236 DLISRLLK----------HNPSQRPMLREVLE 257
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 34/270 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G V++ + + +A+K G M+ +++F+ E + + ++ H +V++YG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS-EEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
CL + +V+E+ + L+ L AA+ L + M + + ++Y+ C
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 126
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMK 783
++HRD++++N L+ VSDFG+ +F+ D +T GT + +PE+ +
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 183
Query: 784 VTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALD-EMLDPRLPTPSRNVHD 841
+ K DV+SFGVL EV +GK P + + S S + +I+ + PRL +
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS------- 233
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLL 871
+ ++ C E PE RP ++ + L
Sbjct: 234 --THVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 131/270 (48%), Gaps = 34/270 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G V++ + + +A+K G M+ + +F+ E + + ++ H +V++YG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE---GSMS-EDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
CL + +V+E+ + L+ L AA+ L + M + + ++Y+ C
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 143
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMK 783
++HRD++++N L+ VSDFG+ +F+ D +T GT + +PE+ +
Sbjct: 144 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 200
Query: 784 VTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALD-EMLDPRLPTPSRNVHD 841
+ K DV+SFGVL EV +GK P + + S S + +I+ + PRL +
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS------- 250
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLL 871
+ ++ C E PE RP ++ + L
Sbjct: 251 --THVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 71/266 (26%), Positives = 127/266 (47%), Gaps = 24/266 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK---PGTMS-PESFLEEAQIMKKLKHDKLVQLYA- 71
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L D + L ++M + ++Y+ + +
Sbjct: 72 VVSEEPIYIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIERMNY---I 127
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ S N+L+ ++DFG+A+ ++ + + A + APE A + T K
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 789 DVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTPSRNVHDKLISI 846
DV+SFG+L E++ KG+ P + +N L+++ R+P P D IS+
Sbjct: 188 DVWSFGILLTELVTKGRVP--------YPGMNNREVLEQVERGYRMPCP----QDCPISL 235
Query: 847 VEVTISCVDENPESRPTMQKVCQLLK 872
E+ I C ++PE RPT + + L+
Sbjct: 236 HELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY + R I + +ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEY---APRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 239
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 240 DLISRLLK----------HNPSQRPMLREVLE 261
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 131/272 (48%), Gaps = 23/272 (8%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
+ + E +G+G G V +K + ++ A+K+ S + ++ F+ E++ L+ + H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIES-----ESERKAFIVELRQLSRVNHP 62
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
NIVK+YG CL+ + +V EY + SL +L M+ ++Y+H
Sbjct: 63 NIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 722 NDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
+ ++HRD+ N+LL + DFG A ++ ++ T G+ ++APE+
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSAAWMAPEVFE 177
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSL-NLNIALDEMLDPRLPTPSRNV 839
+EKCDV+S+G++ EVI + P D I +F + ++ L LP P
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP---- 233
Query: 840 HDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
I + C ++P RP+M+++ +++
Sbjct: 234 ------IESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 131/272 (48%), Gaps = 23/272 (8%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
+ + E +G+G G V +K + ++ A+K+ S + ++ F+ E++ L+ + H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIES-----ESERKAFIVELRQLSRVNHP 61
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
NIVK+YG CL+ + +V EY + SL +L M+ ++Y+H
Sbjct: 62 NIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 722 NDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
+ ++HRD+ N+LL + DFG A ++ ++ T G+ ++APE+
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSAAWMAPEVFE 176
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSL-NLNIALDEMLDPRLPTPSRNV 839
+EKCDV+S+G++ EVI + P D I +F + ++ L LP P
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP---- 232
Query: 840 HDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
I + C ++P RP+M+++ +++
Sbjct: 233 ------IESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 22/268 (8%)
Query: 604 FDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
FD +G+G GSVY + +G+I+A+K+ P+ ++ QE + E+ + + +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDL---QEIIKEISIMQQCDSPH 85
Query: 663 IVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
+VK YG L+IV EY S++ I+ K L +++ + L Y+H
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR--LRNKTLTEDEIATILQSTLKGLEYLH- 142
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 782
F +HRDI + N+LL+ E A ++DFG+A L + + GT ++APE+ +
Sbjct: 143 --FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEI 200
Query: 783 KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS-RNVHD 841
D++S G+ A+E+ +GK P I M + P P P+ R
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI----------FMIPTNPPPTFRKPEL 250
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQ 869
+ + C+ ++PE R T ++ Q
Sbjct: 251 WSDNFTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 105/203 (51%), Gaps = 21/203 (10%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQE-----FLNEVKALTEIWHRNI 663
IG+G G+VY + +A+G+ +A++ +M QQ+ +NE+ + E + NI
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
V L L++V EY SL +++ + + + + + AL ++H++
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAVCRECLQALEFLHSN 136
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 783
++HR+I S N+LL + ++DFG + P+ S + + GT ++APE+
Sbjct: 137 ---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 193
Query: 784 VTEKCDVYSFGVLALEVIKGKHP 806
K D++S G++A+E+I+G+ P
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 86.3 bits (212), Expect = 6e-17, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 603 DFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
DFD +GKG G+VY+++ S I+A+K + + + EV+ + + H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
NI+++YG+ ++++ EY L + R I + +ALSY H
Sbjct: 73 NILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 781
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 782 MKVTEKCDVYSFGVLALEVIKGKHP 806
EK D++S GVL E + G P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 131/270 (48%), Gaps = 34/270 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G V++ + + +A+K G M+ +++F+ E + + ++ H +V++YG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS-EEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
CL + +V E+ + L+ L AA+ L + M + + ++Y+ C
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 124
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMK 783
++HRD++++N L+ VSDFG+ +F+ D +T GT + +PE+ +
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 181
Query: 784 VTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALD-EMLDPRLPTPSRNVHD 841
+ K DV+SFGVL EV +GK P + + S S + +I+ + PRL +
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS------- 231
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLL 871
+ ++ C E PE RP ++ + L
Sbjct: 232 --THVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 23/272 (8%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
A DF+ +GKG G+VY+++ + I+A+K + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+++YG+ ++++ EY + R I + +ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEY---APRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
Y H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEM 182
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837
EK D++S GVL E + GK P + ++ I+ E P T +R
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQETYKRISRVEFTFPDFVTEGAR 239
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
++ +L+ NP RP +++V +
Sbjct: 240 DLISRLLK----------HNPSQRPMLREVLE 261
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 34/278 (12%)
Query: 607 EHCIGKGGQGSVYMSKL-ASGE---IIAVKKFHSPLPGEMTFQQ--EFLNEVKALTEIWH 660
E IG G G V +L A G+ +A+K L G T +Q EFL+E + + H
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKT----LKGGYTERQRREFLSEASIMGQFEH 76
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-NDAAAKNLGWTRRMNMIKGIVDALSY 719
NI+++ G + + I+ E+ + +L L ND + + + M++GI + Y
Sbjct: 77 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRY 133
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG-----YV 774
+ + VHRD++++N+L++ VSDFG+++FL+ +SS+ TE + G +
Sbjct: 134 LAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833
APE K T D +S+G++ EV+ G+ P S+ ++ A+++ D RLP
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-----YWDMSNQDVINAIEQ--DYRLP 243
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
P D S+ ++ + C ++ +RP +V L
Sbjct: 244 PPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 69/270 (25%), Positives = 131/270 (48%), Gaps = 34/270 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G V++ + + +A+K G M+ +++F+ E + + ++ H +V++YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS-EEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
CL + +V+E+ + L+ L AA+ L + M + + ++Y+
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEE---A 122
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMK 783
++HRD++++N L+ VSDFG+ +F+ D +T GT + +PE+ +
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 180
Query: 784 VTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALD-EMLDPRLPTPSRNVHD 841
+ K DV+SFGVL EV +GK P + + S S + +I+ + PRL +
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS------- 230
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLL 871
+ ++ C E PE RP ++ + L
Sbjct: 231 --THVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 603 DFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
DFD +GKG G+VY+++ S I+A+K + + + EV+ + + H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
NI+++YG+ ++++ EY L + R I + +ALSY H
Sbjct: 73 NILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 781
+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 782 MKVTEKCDVYSFGVLALEVIKGKHP 806
EK D++S GVL E + G P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 610 IGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEIWHRNIVK 665
IG+G G V ++ + +SG+++AVKK ++ QQ NEV + + H N+V+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK------GIVDALSY 719
+Y L L++V E+ + +L I+++ RMN + ++ ALS
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHT----------RMNEEQIAAVCLAVLQALSV 262
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 263 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 319
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G++ +E++ G+ P
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 610 IGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEIWHRNIVK 665
IG+G G V ++ + +SG+++AVKK ++ QQ NEV + + H N+V+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN------MIKGIVDALSY 719
+Y L L++V E+ + +L I+++ RMN + ++ ALS
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHT----------RMNEEQIAAVCLAVLQALSV 185
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 186 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 242
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G++ +E++ G+ P
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 15/249 (6%)
Query: 276 PIPILRNLTSLERVRL----DRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRC 331
P PI +L +L + N L G I + L Y+ ++ N G I +
Sbjct: 65 PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124
Query: 332 PKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLN-FFIKLVLAHN 390
L TLDFS N ++G +PP I L + N I G IP G + F + ++ N
Sbjct: 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN 184
Query: 391 QLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLG---NLELIHLSELDLSRNFLREAIP 447
+L+G++ P +L L +DLS N L G N + IHL++ L+ +
Sbjct: 185 RLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL------ 237
Query: 448 SQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFKDAPIEA 507
++ + ++L L+L +N + G +P ++ L +++S+N L G IP + + A
Sbjct: 238 GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSA 297
Query: 508 LQGNKGLYG 516
NK L G
Sbjct: 298 YANNKCLCG 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 119/262 (45%), Gaps = 29/262 (11%)
Query: 13 IPSELRNLKSLSDLELGN-NKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFF 71
IPS L NL L+ L +G N L G IP ++ LT L LYI ++SG+IP + +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 72 SDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXXXXXXXX 131
L+ S N LSG++PPS+ +L NL + D N +S +IP
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD-------------------- 167
Query: 132 XXPHSLGNLTNLAT-LYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSN 190
S G+ + L T + I N L+ I NL +L+ + LS N G G+ N
Sbjct: 168 ----SYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKN 222
Query: 191 LATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTYLNLFENSLS 250
++L NSL++ + N++ G++P + L L LN+ N+L
Sbjct: 223 TQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281
Query: 251 GAIPYEYRNLVKLTILLLGHNQ 272
G IP + NL + + +N+
Sbjct: 282 GEIP-QGGNLQRFDVSAYANNK 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 135/318 (42%), Gaps = 57/318 (17%)
Query: 137 LGNLTNLATLYIYSNSLSASILGKIGNLKS----LSNLQLSENNFNGS--IPPSLGNLSN 190
LGN T L++ ++ + + LG + + + ++NL LS N IP SL NL
Sbjct: 18 LGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77
Query: 191 LATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTYLNLFENSLS 250
L LY+ N L G IP ++ L+ L YL + ++S
Sbjct: 78 LNFLYIG-----------------------GINNLVGPIPPAIAKLTQLHYLYITHTNVS 114
Query: 251 GAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNL 310
GAIP L + +L + N L+G + S PNL
Sbjct: 115 GAIP-----------------------DFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151
Query: 311 TYIDLSQNNFYGEISSDWGRCPKL-STLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIV 369
I N G I +G KL +++ S N +TG +PP + + L +DLS N +
Sbjct: 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE 210
Query: 370 GEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLEL 429
G+ + G K+ LA N L+ L K+G L LDL +NR+ ++P+ L L+
Sbjct: 211 GDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKF 269
Query: 430 IHLSELDLSRNFLREAIP 447
+H L++S N L IP
Sbjct: 270 LH--SLNVSFNNLCGEIP 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPG 63
I + ++ +IP L +K+L L+ N LSG++P S+ +L NL + N +SG+IP
Sbjct: 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Query: 64 EIGNF-RFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXX 122
G+F + F+ + +S N+L+G IPP+ NL NLA + L N L
Sbjct: 168 SYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVL---------- 216
Query: 123 XXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIP 182
G+ N +++ NSL A LGK+G K+L+ L L N G++P
Sbjct: 217 --------------FGSDKNTQKIHLAKNSL-AFDLGKVGLSKNLNGLDLRNNRIYGTLP 261
Query: 183 PSLGNLSNLATLYLDTNSLSYSIP 206
L L L +L + N+L IP
Sbjct: 262 QGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 21 KSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNK 80
K+L+ L+L NN++ G++P L L L +L + N+L G IP + GN + F +NNK
Sbjct: 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNK 302
Query: 81 -LSGSIPPS 88
L GS P+
Sbjct: 303 CLCGSPLPA 311
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V K +A+K G M+ + EF+ E K + + H +V++YG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
C R +FI+ EY L L + + M K + +A+ Y+ + F +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 133
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD++++N L++ + VSDFG+++++ D +T G+ + PE+ K +
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 787 KCDVYSFGVLALEVIK-GKHPRD-FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
K D+++FGVL E+ GK P + F +S + + + L P L + +K+
Sbjct: 192 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL---YRPHLAS------EKVY 242
Query: 845 SIVEVTISCVDENPESRPTMQ 865
+I+ SC E + RPT +
Sbjct: 243 TIM---YSCWHEKADERPTFK 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V K +A+K G M+ + EF+ E K + + H +V++YG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
C R +FI+ EY L L + + M K + +A+ Y+ + F +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 126
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD++++N L++ + VSDFG+++++ D +T G+ + PE+ K +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 787 KCDVYSFGVLALEVIK-GKHPRD-FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
K D+++FGVL E+ GK P + F +S + + + L P L + +K+
Sbjct: 185 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL---YRPHLAS------EKVY 235
Query: 845 SIVEVTISCVDENPESRPTMQ 865
+I+ SC E + RPT +
Sbjct: 236 TIM---YSCWHEKADERPTFK 253
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V K +A+K G M+ + EF+ E K + + H +V++YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
C R +FI+ EY L L + + M K + +A+ Y+ + F +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 127
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD++++N L++ + VSDFG+++++ D +T G+ + PE+ K +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 787 KCDVYSFGVLALEVIK-GKHPRD-FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
K D+++FGVL E+ GK P + F +S + + + L P L + +K+
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL---YRPHLAS------EKVY 236
Query: 845 SIVEVTISCVDENPESRPTMQ 865
+I+ SC E + RPT +
Sbjct: 237 TIM---YSCWHEKADERPTFK 254
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V K +A+K G M+ + EF+ E K + + H +V++YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
C R +FI+ EY L L + + M K + +A+ Y+ + F +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 142
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD++++N L++ + VSDFG+++++ D +T G+ + PE+ K +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 787 KCDVYSFGVLALEVIK-GKHPRD-FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
K D+++FGVL E+ GK P + F +S + + + L P L + +K+
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL---YRPHLAS------EKVY 251
Query: 845 SIVEVTISCVDENPESRPTMQ 865
+I+ SC E + RPT +
Sbjct: 252 TIM---YSCWHEKADERPTFK 269
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V K +A+K G M+ + EF+ E K + + H +V++YG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
C R +FI+ EY L L + + M K + +A+ Y+ + F +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 122
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD++++N L++ + VSDFG+++++ D +T G+ + PE+ K +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 787 KCDVYSFGVLALEVIK-GKHPRD-FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
K D+++FGVL E+ GK P + F +S + + + L P L + +K+
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL---YRPHLAS------EKVY 231
Query: 845 SIVEVTISCVDENPESRPTMQ 865
+I+ SC E + RPT +
Sbjct: 232 TIM---YSCWHEKADERPTFK 249
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 610 IGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEIWHRNIVK 665
IG+G G V ++ + +SG+++AVKK ++ QQ NEV + + H N+V+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN------MIKGIVDALSY 719
+Y L L++V E+ + +L I+++ RMN + ++ ALS
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHT----------RMNEEQIAAVCLAVLQALSV 142
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 143 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 199
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G++ +E++ G+ P
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 610 IGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEIWHRNIVK 665
IG+G G V ++ + +SG+++AVKK ++ QQ NEV + + H N+V+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN------MIKGIVDALSY 719
+Y L L++V E+ + +L I+++ RMN + ++ ALS
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHT----------RMNEEQIAAVCLAVLQALSV 140
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 141 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 197
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G++ +E++ G+ P
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 29/275 (10%)
Query: 607 EHCIGKGGQGSVY--MSKLASGEI---IAVKKFHSPLPGEMTFQQ-EFLNEVKALTEIWH 660
+ IG G G VY M K +SG+ +A+K + G Q+ +FL E + + H
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA---GYTEKQRVDFLGEAGIMGQFSH 105
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NI+++ G + + I+ EY + +L L ++ + + M++GI + Y+
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQLVGMLRGIAAGMKYL 163
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSNWTELAGT--YGYVAPE 777
N + VHRD++++N+L++ VSDFG+++ L+ D + +T G + APE
Sbjct: 164 ANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
K T DV+SFG++ EV+ G+ P S+ + A+++ RLPTP
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERP-----YWELSNHEVMKAINDGF--RLPTP- 272
Query: 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
D +I ++ + C + RP + +L
Sbjct: 273 ---MDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V K +A+K G M+ + EF+ E K + + H +V++YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
C R +FI+ EY L L + + M K + +A+ Y+ + F +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 127
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD++++N L++ + VSDFG+++++ D +T G+ + PE+ K +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 787 KCDVYSFGVLALEVIK-GKHPRD-FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
K D+++FGVL E+ GK P + F +S + + + L P L + +K+
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL---YRPHLAS------EKVY 236
Query: 845 SIVEVTISCVDENPESRPTMQ 865
+I+ SC E + RPT +
Sbjct: 237 TIM---YSCWHEKADERPTFK 254
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 610 IGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEIWHRNIVK 665
IG+G G V ++ + +SG+++AVKK ++ QQ NEV + + H N+V+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN------MIKGIVDALSY 719
+Y L L++V E+ + +L I+++ RMN + ++ ALS
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHT----------RMNEEQIAAVCLAVLQALSV 135
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 136 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 192
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G++ +E++ G+ P
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 120/278 (43%), Gaps = 44/278 (15%)
Query: 610 IGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V+ +L A ++AVK LP ++ + +FL E + L + H NIV++ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 179
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
C + ++IV E + L + A L + M+ + Y+ + C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG-----------YVAPE 777
+HRD++++N L+ +N +SDFG+++ E G Y + APE
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR---------EEADGVYAASGGLRQVPVKWTAPE 285
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP--RLPT 834
+ + + DV+SFG+L E G P +S N E ++ RLP
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS---------NQQTREFVEKGGRLPC 336
Query: 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
P D + ++E C P RP+ + Q L+
Sbjct: 337 PEL-CPDAVFRLME---QCWAYEPGQRPSFSTIYQELQ 370
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 610 IGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEIWHRNIVK 665
IG+G G V ++ + +SG+++AVKK ++ QQ NEV + + H N+V+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN------MIKGIVDALSY 719
+Y L L++V E+ + +L I+++ RMN + ++ ALS
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHT----------RMNEEQIAAVCLAVLQALSV 131
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 132 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 188
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G++ +E++ G+ P
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 34/278 (12%)
Query: 607 EHCIGKGGQGSVYMSKL-ASGE---IIAVKKFHSPLPGEMTFQQ--EFLNEVKALTEIWH 660
E IG G G V +L A G+ +A+K L G T +Q EFL+E + + H
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKT----LKGGYTERQRREFLSEASIMGQFEH 74
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-NDAAAKNLGWTRRMNMIKGIVDALSY 719
NI+++ G + + I+ E+ + +L L ND + + + M++GI + Y
Sbjct: 75 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRY 131
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG-----YV 774
+ + VHRD++++N+L++ VSDFG+++FL+ +SS+ T + G +
Sbjct: 132 LAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833
APE K T D +S+G++ EV+ G+ P S+ ++ A+++ D RLP
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-----YWDMSNQDVINAIEQ--DYRLP 241
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
P D S+ ++ + C ++ +RP +V L
Sbjct: 242 PPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 24/261 (9%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G GG V++++ L +AVK + L + +F F E + + H IV VY
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 669 FCLHVRHL----FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+IV EY +L I+ + + R + +I AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYT 781
I+HRD+ N+++ N V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 782 MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
V + DVYS G + EV+ G+ P F S ++ D P P H+
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPVSVAYQHVRED-------PIPPSARHE 244
Query: 842 KLISIVE-VTISCVDENPESR 861
L + ++ V + + +NPE+R
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V K +A+K G M+ + EF+ E K + + H +V++YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
C R +FI+ EY L L + + M K + +A+ Y+ + F +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 142
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD++++N L++ + VSDFG+++++ D T G+ + PE+ K +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE--TSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 787 KCDVYSFGVLALEVIK-GKHPRD-FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
K D+++FGVL E+ GK P + F +S + + + L P L + +K+
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL---YRPHLAS------EKVY 251
Query: 845 SIVEVTISCVDENPESRPTMQ 865
+I+ SC E + RPT +
Sbjct: 252 TIM---YSCWHEKADERPTFK 269
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV EY + SL L A +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + F VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGF---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 259
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 260 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV EY + SL L A +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+A+ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 259
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 260 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 28/268 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 329
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 330 VVSEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 385
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY---GYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEMLDP-RLPTPSRNVHDKLI 844
K DV+SFG+L E+ KG+ P + + LD++ R+P P
Sbjct: 444 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPE---- 491
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLLK 872
S+ ++ C + PE RPT + + L+
Sbjct: 492 SLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 24/261 (9%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G GG V++++ L +AVK + L + +F F E + + H IV VY
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 669 FCLHVRHL----FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+IV EY +L I+ + + R + +I AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYT 781
I+HRD+ N+++ N V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 782 MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
V + DVYS G + EV+ G+ P F S ++ D P P H+
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPVSVAYQHVRED-------PIPPSARHE 244
Query: 842 KLISIVE-VTISCVDENPESR 861
L + ++ V + + +NPE+R
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 137/319 (42%), Gaps = 57/319 (17%)
Query: 586 LTFEGKI----------IYEEIIRATNDFDDE---------HCIGKGGQGSVYMSKL-AS 625
L F+GK+ YEE RA F E IG G G V +L
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 626 GEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEY 682
G+ +A+K + +++FL+E + + H NI+++ G R IV EY
Sbjct: 74 GQRDVPVAIKALKAGYTERQ--RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131
Query: 683 FKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF 742
+ SL L + + + M++G+ + Y+ + + VHRD++++NVL+D
Sbjct: 132 MENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDS 186
Query: 743 ENEAHVSDFGIAKFLKPD-SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALE 799
VSDFG+++ L+ D + +T G + APE + DV+SFGV+ E
Sbjct: 187 NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 800 VIK-GKHP------RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTIS 852
V+ G+ P RD ISS+ RLP P H ++ ++ +
Sbjct: 247 VLAYGERPYWNMTNRDVISSVEEGY-------------RLPAPMGCPH----ALHQLMLD 289
Query: 853 CVDENPESRPTMQKVCQLL 871
C ++ RP ++ +L
Sbjct: 290 CWHKDRAQRPRFSQIVSVL 308
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 28/263 (10%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G GG V++++ L +AVK + L + +F F E + + H IV VY
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 669 FCLHVRHL----FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+IV EY +L I+ + + R + +I AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYT 781
I+HRD+ N+++ N V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 782 MKVTEKCDVYSFGVLALEVIKGKHP--RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839
V + DVYS G + EV+ G+ P D S+++ + + P P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRED-----------PIPPSAR 242
Query: 840 HDKLISIVE-VTISCVDENPESR 861
H+ L + ++ V + + +NPE+R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENR 265
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 77
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 78 VVSEEPIYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVERMNY---V 133
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + WT G + APE A + T
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 192 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 243
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C + PE RPT + + L+
Sbjct: 244 -------LMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 599 RATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEF 648
R F++ H +GKG GSV M + +GE++AVKK + ++F
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 61
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
E++ L + H NIVK G C R+L ++ EY SL L A A+ + +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--AHAERIDHIKL 119
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+ I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 120 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 767 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSL 818
+ APE K + DV+SFGV+ E+ K K P +F+ +
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 819 NLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
I L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 283
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 141/302 (46%), Gaps = 35/302 (11%)
Query: 587 TFEGKIIYEEIIRATNDFDDE---------HCIGKGGQGSVYMSKL---ASGEI-IAVKK 633
TF YE+ + ++F E +G G G V +L + EI +A+K
Sbjct: 21 TFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 634 FHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS 693
+ +++FL E + + H NI+++ G + + IV EY + SL L
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 694 NDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753
A + + + M++GI + Y+ + + VHRD++++N+L++ VSDFG+
Sbjct: 139 KHDAQFTV--IQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGL 193
Query: 754 AKFLKPD-SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDF 809
++ L+ D + +T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--- 250
Query: 810 ISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
S+ ++ A+DE RLP P D ++ ++ + C ++ +RP +++
Sbjct: 251 --YWEMSNQDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 870 LL 871
+L
Sbjct: 303 IL 304
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 24/261 (9%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G GG V++++ L +AVK + L + +F F E + + H IV VY
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 669 FCLHVRHL----FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+IV EY +L I+ + + R + +I AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYT 781
I+HRD+ N+++ N V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 782 MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
V + DVYS G + EV+ G+ P F S ++ D P P H+
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPVSVAYQHVRED-------PIPPSARHE 244
Query: 842 KLISIVE-VTISCVDENPESR 861
L + ++ V + + +NPE+R
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 28/268 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 248 -VSEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 302
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY---GYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTPSRNVHDKLI 844
K DV+SFG+L E+ KG+ P + + LD++ R+P P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPE---- 408
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLLK 872
S+ ++ C + PE RPT + + L+
Sbjct: 409 SLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 26/262 (9%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G GG V++++ L +AVK + L + +F F E + + H IV VY
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 669 FCLHVRHL----FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+IV EY +L I+ + + R + +I AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN----WTELAGTYGYVAPELAY 780
I+HRD+ N+L+ N V DFGIA+ + DS N + GT Y++PE A
Sbjct: 137 ---IIHRDVKPANILISATNAVKVVDFGIARAIA-DSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840
V + DVYS G + EV+ G+ P F S ++ D P P H
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPVSVAYQHVRED-------PIPPSARH 243
Query: 841 DKLISIVE-VTISCVDENPESR 861
+ L + ++ V + + +NPE+R
Sbjct: 244 EGLSADLDAVVLKALAKNPENR 265
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 28/268 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 248 -VSEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 302
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY---GYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTPSRNVHDKLI 844
K DV+SFG+L E+ KG+ P + + LD++ R+P P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPE---- 408
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLLK 872
S+ ++ C + PE RPT + + L+
Sbjct: 409 SLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 32/272 (11%)
Query: 610 IGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V+ +L A ++AVK LP ++ + +FL E + L + H NIV++ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 179
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
C + ++IV E + L + A L + M+ + Y+ + C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-----TYGYVAPELAYTMK 783
+HRD++++N L+ +N +SDFG++ + ++ +G + APE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMS---REEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 784 VTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP--RLPTPSRNVH 840
+ + DV+SFG+L E G P +S N E ++ RLP P
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLS---------NQQTREFVEKGGRLPCPEL-CP 341
Query: 841 DKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
D + ++E C P RP+ + Q L+
Sbjct: 342 DAVFRLME---QCWAYEPGQRPSFSTIYQELQ 370
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV EY + SL L A +
Sbjct: 78 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 135
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 136 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 247
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 248 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV EY + SL L A +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 259
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 260 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV EY + SL L A +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+ + L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 259
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 260 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV EY + SL L A +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 259
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 260 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV EY + SL L A +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 259
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 260 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 28/268 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 248 -VSEEPIYIVGEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 302
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY---GYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTPSRNVHDKLI 844
K DV+SFG+L E+ KG+ P + + LD++ R+P P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPE---- 408
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLLK 872
S+ ++ C + PE RPT + + L+
Sbjct: 409 SLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 57/319 (17%)
Query: 586 LTFEGKI----------IYEEIIRATNDFDDE---------HCIGKGGQGSVYMSKL-AS 625
L F+GK+ YEE RA F E IG G G V +L
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 626 GEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEY 682
G+ +A+K + +++FL+E + + H NI+++ G R IV EY
Sbjct: 74 GQRDVPVAIKALKAGYTERQ--RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131
Query: 683 FKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF 742
+ SL L + + + M++G+ + Y+ + + VHRD++++NVL+D
Sbjct: 132 MENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDS 186
Query: 743 ENEAHVSDFGIAKFLKPDSSNWTELAG---TYGYVAPELAYTMKVTEKCDVYSFGVLALE 799
VSDFG+++ L+ D G + APE + DV+SFGV+ E
Sbjct: 187 NLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 800 VIK-GKHP------RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTIS 852
V+ G+ P RD ISS+ RLP P H ++ ++ +
Sbjct: 247 VLAYGERPYWNMTNRDVISSVEEGY-------------RLPAPMGCPH----ALHQLMLD 289
Query: 853 CVDENPESRPTMQKVCQLL 871
C ++ RP ++ +L
Sbjct: 290 CWHKDRAQRPRFSQIVSVL 308
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 24/261 (9%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G GG V++++ L +AVK + L + +F F E + + H IV VY
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 669 FCLHVRHL----FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+IV EY +L I+ + + R + +I AL++ H +
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 153
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYT 781
I+HRD+ N+++ N V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 154 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 210
Query: 782 MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
V + DVYS G + EV+ G+ P F S ++ D P P H+
Sbjct: 211 DSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPVSVAYQHVRED-------PIPPSARHE 261
Query: 842 KLISIVE-VTISCVDENPESR 861
L + ++ V + + +NPE+R
Sbjct: 262 GLSADLDAVVLKALAKNPENR 282
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV EY + SL L A +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 118
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 119 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 230
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 231 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV EY + SL L A +
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 145
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 146 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 257
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 258 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+D++ + IG G V + A E +A+K+ + L T E L E++A+++ H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQTSMDELLKEIQAMSQCHH 67
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKN-----LGWTRRMNMIKGIVD 715
NIV Y + L++V + S+ I+ + A L + +++ +++
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-----SSNWTELAGT 770
L Y+H + +HRD+ + N+LL + ++DFG++ FL + GT
Sbjct: 128 GLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 771 YGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLD 829
++APE+ ++ + K D++SFG+ A+E+ G P M L L D
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------D 238
Query: 830 PRLPTPSRNVHDKLI------SIVEVTISCVDENPESRPT 863
P P+ V DK + S ++ C+ ++PE RPT
Sbjct: 239 P--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 610 IGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEIWHRNIVK 665
IG+G G V +++ SG +AVK ++ QQ NEV + + H N+V+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM------DLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCF 725
+Y L L+++ E+ + +L I+S L + + + ++ AL+Y+H
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQG- 161
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 785
++HRDI S ++LL + +SDFG + D L GT ++APE+
Sbjct: 162 --VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 786 EKCDVYSFGVLALEVIKGKHP 806
+ D++S G++ +E++ G+ P
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPP 240
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEIWHRNIVK 665
IG+G G V ++ + +G+ +AVKK ++ QQ NEV + + H N+V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM------DLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCF 725
+Y L L++V E+ + +L I+++ + T +++++ ALSY+HN
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLR----ALSYLHNQG- 161
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 785
++HRDI S ++LL + +SDFG + + L GT ++APE+ +
Sbjct: 162 --VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 786 EKCDVYSFGVLALEVIKGKHP 806
+ D++S G++ +E+I G+ P
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPP 240
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+D++ + IG G V + A E +A+K+ + L T E L E++A+++ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQTSMDELLKEIQAMSQCHH 72
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKN-----LGWTRRMNMIKGIVD 715
NIV Y + L++V + S+ I+ + A L + +++ +++
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK-----PDSSNWTELAGT 770
L Y+H + +HRD+ + N+LL + ++DFG++ FL + GT
Sbjct: 133 GLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 771 YGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLD 829
++APE+ ++ + K D++SFG+ A+E+ G P M L L D
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------D 243
Query: 830 PRLPTPSRNVHDKLI------SIVEVTISCVDENPESRPT 863
P P+ V DK + S ++ C+ ++PE RPT
Sbjct: 244 P--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 28/268 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGNMS-PEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 249 -VSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 303
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY---GYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+ + + + + +T G + APE A + T
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTPSRNVHDKLI 844
K DV+SFG+L E+ KG+ P + + LD++ R+P P
Sbjct: 362 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPE---- 409
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLLK 872
S+ ++ C ++PE RPT + + L+
Sbjct: 410 SLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + +I H +V++Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKIRHEKLVQLYA- 80
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 81 VVSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 195 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C ++PE RPT + + L+
Sbjct: 247 -------LMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 21/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M + +AVK PG M+ Q FL E + + H +V++Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK---PGTMSVQA-FLEEANLMKTLQHDKLVRLYAV 76
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY SL L +D K L + ++ I + ++Y+ + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---I 132
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + NVL+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 789 DVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIV 847
DV+SFG+L E++ GK P ++ ++ AL + R+P N D+L I+
Sbjct: 193 DVWSFGILLYEIVTYGKIPYP-----GRTNADVMTALSQGY--RMPR-VENCPDELYDIM 244
Query: 848 EVTISCVDENPESRPTMQKVCQLL 871
++ C E E RPT + +L
Sbjct: 245 KM---CWKEKAEERPTFDYLQSVL 265
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 80
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 81 VVSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+++ N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 195 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C ++PE RPT + + L+
Sbjct: 247 -------LMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKK--FHSPLPGEMTFQQEFLNEVKALTEIW 659
+DFD +GKG G+VY+++ + I K F S L E + + E++ + +
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-GVEHQLRREIEIQSHLR 72
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI+++Y + + ++++ E+ L L R ++ + DAL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHY 129
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
H ++HRDI +N+L+ ++ E ++DFG + + S + GT Y+ PE+
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839
EK D++ GVL E + G P D S +N+ D P L S+++
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLKFPPFLSDGSKDL 242
Query: 840 HDKLI 844
KL+
Sbjct: 243 ISKLL 247
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKK--FHSPLPGEMTFQQEFLNEVKALTEIW 659
+DFD +GKG G+VY+++ + I K F S L E + + E++ + +
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-GVEHQLRREIEIQSHLR 72
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI+++Y + + ++++ E+ L L R ++ + DAL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHY 129
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
H ++HRDI +N+L+ ++ E ++DFG + + S + GT Y+ PE+
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839
EK D++ GVL E + G P D S +N+ D P L S+++
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLKFPPFLSDGSKDL 242
Query: 840 HDKLI 844
KL+
Sbjct: 243 ISKLL 247
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKK--FHSPLPGEMTFQQEFLNEVKALTEIW 659
+DFD +GKG G+VY+++ + I K F S L E + + E++ + +
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-GVEHQLRREIEIQSHLR 73
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI+++Y + + ++++ E+ L L R ++ + DAL Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHY 130
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
H ++HRDI +N+L+ ++ E ++DFG + + S + GT Y+ PE+
Sbjct: 131 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 185
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839
EK D++ GVL E + G P D S +N+ D P L S+++
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLKFPPFLSDGSKDL 243
Query: 840 HDKLI 844
KL+
Sbjct: 244 ISKLL 248
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 80
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 81 VVSEEPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 195 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C ++PE RPT + + L+
Sbjct: 247 -------LMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 69
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 70 VVSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 125
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 184 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 235
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C ++PE RPT + + L+
Sbjct: 236 -------LMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 71
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 72 VVSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 127
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 186 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 237
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C ++PE RPT + + L+
Sbjct: 238 -------LMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 80
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 81 VVSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 195 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C ++PE RPT + + L+
Sbjct: 247 -------LMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 80
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 81 VVSEEPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ V+DFG+A+ ++ + + A + APE A + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 789 DVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHDKL 843
DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 197 DVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD-- 246
Query: 844 ISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C ++PE RPT + + L+
Sbjct: 247 -----LMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 36/292 (12%)
Query: 598 IRATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQE 647
+R F++ H +GKG GSV M + +GE++AVKK + ++
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RD 57
Query: 648 FLNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
F E++ L + H NIVK G C R+L ++ EY SL L + + +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIK 115
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT 765
+ I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 116 LLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 766 ELAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSS 817
+ APE K + DV+SFGV+ E+ K K P +F+ +
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 818 LNLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
I L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 280
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 73
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 74 VVSEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 129
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 188 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 239
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C + PE RPT + + L+
Sbjct: 240 -------LMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 80
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 81 VVSEEPIYIVCEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 195 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C ++PE RPT + + L+
Sbjct: 247 -------LMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 38/300 (12%)
Query: 590 GKIIYEEIIRATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLP 639
G + +E+ R F++ H +GKG GSV M + +GE++AVKK
Sbjct: 1 GAMAFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 58
Query: 640 GEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAA 697
+ ++F E++ L + H NIVK G C R+L ++ EY SL L
Sbjct: 59 EHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--H 113
Query: 698 AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757
+ + + + I + Y+ + +HRD++++N+L++ EN + DFG+ K L
Sbjct: 114 KERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVL 170
Query: 758 KPDSSNWTELAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDF 809
D + APE K + DV+SFGV+ E+ K K P +F
Sbjct: 171 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 230
Query: 810 ISSMSFSSLNLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
+ + I L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 231 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 286
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 130/273 (47%), Gaps = 26/273 (9%)
Query: 607 EHCIGKGGQGSVYMSKL---ASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
E IG G G V +L EI +A+K + + +++FL+E + + H N
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--RRDFLSEASIMGQFDHPN 76
Query: 663 IVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
I+ + G + + I+ EY + SL L + + + + M++GI + Y+ +
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSD 134
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSNWTELAGT--YGYVAPELA 779
+ VHRD++++N+L++ VSDFG+++ L+ D + +T G + APE
Sbjct: 135 MSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 780 YTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838
K T DV+S+G++ EV+ G+ P S+ ++ A++E RLP P
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERP-----YWDMSNQDVIKAIEEGY--RLPPP--- 241
Query: 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
D I++ ++ + C + RP ++ +L
Sbjct: 242 -MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 599 RATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEF 648
R F++ H +GKG GSV M + +GE++AVKK + ++F
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 63
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
E++ L + H NIVK G C R+L ++ EY SL L + + +
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 121
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+ I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 122 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 178
Query: 767 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSL 818
+ APE K + DV+SFGV+ E+ K K P +F+ +
Sbjct: 179 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 238
Query: 819 NLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
I L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 239 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 285
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 132/307 (42%), Gaps = 36/307 (11%)
Query: 586 LTFEGKIIYEEIIRATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFH 635
L F+G + R F++ H +GKG GSV M + +GE++AVKK
Sbjct: 20 LYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ 79
Query: 636 SPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILS 693
+ ++F E++ L + H NIVK G C R+L ++ EY SL L
Sbjct: 80 HSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ 136
Query: 694 NDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753
+ + + + I + Y+ + +HRD++++N+L++ EN + DFG+
Sbjct: 137 K--HKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGL 191
Query: 754 AKFLKPDSSNWTELAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH- 805
K L D + APE K + DV+SFGV+ E+ K K
Sbjct: 192 TKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251
Query: 806 PRDFISSMSFSSLNLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESR 861
P +F+ + I L E+L + RLP P D++ I+ C + N R
Sbjct: 252 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQR 307
Query: 862 PTMQKVC 868
P+ + +
Sbjct: 308 PSFRDLA 314
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 599 RATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEF 648
R F++ H +GKG GSV M + +GE++AVKK + ++F
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 65
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
E++ L + H NIVK G C R+L ++ EY SL L + + +
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 123
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+ I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 124 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 180
Query: 767 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSL 818
+ APE K + DV+SFGV+ E+ K K P +F+ +
Sbjct: 181 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 240
Query: 819 NLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
I L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 241 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 287
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 77
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 78 VVSEEPIYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVERMNY---V 133
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 192 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 243
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C + PE RPT + + L+
Sbjct: 244 -------LMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 599 RATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEF 648
R F++ H +GKG GSV M + +GE++AVKK + ++F
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 61
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
E++ L + H NIVK G C R+L ++ EY SL L + + +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 119
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+ I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 120 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 767 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSL 818
+ APE K + DV+SFGV+ E+ K K P +F+ +
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 819 NLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
I L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 283
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 21/261 (8%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IGKG G V+ + +++A+K L ++ E+ L++ + K YG
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L L+I+ EY S +L A + M+K I+ L Y+H++
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSE---KK 141
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRDI + NVLL + + ++DFG+A L GT ++APE+ K
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 201
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
D++S G+ A+E+ KG+ P + M L P+ P+ V D S E
Sbjct: 202 DIWSLGITAIELAKGEPPNSDMHPMRVL----------FLIPKNNPPTL-VGDFTKSFKE 250
Query: 849 VTISCVDENPESRPTMQKVCQ 869
+C++++P RPT +++ +
Sbjct: 251 FIDACLNKDPSFRPTAKELLK 271
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 599 RATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEF 648
R F++ H +GKG GSV M + +GE++AVKK + ++F
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 57
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
E++ L + H NIVK G C R+L ++ EY SL L + + +
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 115
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+ I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 116 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 767 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSL 818
+ APE K + DV+SFGV+ E+ K K P +F+ +
Sbjct: 173 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 232
Query: 819 NLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
I L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 233 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 279
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 599 RATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEF 648
R F++ H +GKG GSV M + +GE++AVKK + ++F
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 62
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
E++ L + H NIVK G C R+L ++ EY SL L + + +
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 120
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+ I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 121 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 177
Query: 767 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSL 818
+ APE K + DV+SFGV+ E+ K K P +F+ +
Sbjct: 178 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 237
Query: 819 NLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
I L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 238 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 284
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 28/275 (10%)
Query: 607 EHCIGKGGQGSVYMSKL---ASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
E IG G G V L EI +A+K S + +++FL+E + + H N
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ--RRDFLSEASIMGQFDHPN 95
Query: 663 IVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
++ + G + I+ E+ + SL L + + + + M++GI + Y+ +
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYLAD 153
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG-----YVAPE 777
+ VHRD++++N+L++ VSDFG+++FL+ D+S+ T + G + APE
Sbjct: 154 MNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
K T DV+S+G++ EV+ G+ P M+ + I D L P + PS
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDVINAIEQDYRLPPPMDCPS 267
Query: 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
++ ++ + C ++ RP ++ L
Sbjct: 268 --------ALHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 35/304 (11%)
Query: 585 VLTFEGKIIYEEIIRATNDFDDE---------HCIGKGGQGSVYMSKL---ASGEI-IAV 631
V TF +E+ +A +F E IG G G V +L EI +A+
Sbjct: 3 VRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAI 62
Query: 632 KKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVI 691
K + + +++FL+E + + H NI+ + G + + I+ EY + SL
Sbjct: 63 KTLKAGYTDKQ--RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF 120
Query: 692 LSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDF 751
L + + + + M++GI + Y+ + VHRD++++N+L++ VSDF
Sbjct: 121 LRKNDGRFTV--IQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDF 175
Query: 752 GIAKFLKPD-SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPR 807
G+++ L+ D + +T G + APE K T DV+S+G++ EV+ G+ P
Sbjct: 176 GMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP- 234
Query: 808 DFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
S+ ++ A++E RLP P D I++ ++ + C + RP ++
Sbjct: 235 ----YWDMSNQDVIKAIEEGY--RLPPP----MDCPIALHQLMLDCWQKERSDRPKFGQI 284
Query: 868 CQLL 871
+L
Sbjct: 285 VNML 288
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV E + SL L A +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--I 147
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 259
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 260 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 32/295 (10%)
Query: 586 LTFEGKIIYEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTF 644
L F+G Y++ D +H +G G G VY + +AVK L +
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTME 65
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+EFL E + EI H N+V++ G C +I+ E+ +L L + + +
Sbjct: 66 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV 124
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNW 764
+ M I A+ Y+ F +HRD++++N L+ + V+DFG+++ + D+ +
Sbjct: 125 VLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--Y 179
Query: 765 TELAGT---YGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLN 819
T AG + APE LAY K + K DV++FGVL E+ G P + ++
Sbjct: 180 TAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGID 230
Query: 820 LNIALDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L+ + E+L D R+ P + E+ +C NP RP+ ++ Q +
Sbjct: 231 LS-QVYELLEKDYRMERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+ + G + + IV EY + SL L + +
Sbjct: 67 RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--I 124
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 125 QLVGMLRGISAGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 181
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + APE K T DV+S+G++ EV+ G+ P ++ ++
Sbjct: 182 YTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP-----YWEMTNQDV 236
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A++E RLP+P D ++ ++ + C + SRP ++ +L
Sbjct: 237 IKAVEEGY--RLPSP----MDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Query: 599 RATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEF 648
R F++ H +GKG GSV M + +GE++AVKK + ++F
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 59
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
E++ L + H NIVK G C R+L ++ EY SL L + + +
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 117
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+ I + Y+ + +HR+++++N+L++ EN + DFG+ K L D +
Sbjct: 118 LQYTSQICKGMEYLGTKRY---IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 767 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSL 818
+ APE K + DV+SFGV+ E+ K K P +F+ +
Sbjct: 175 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 234
Query: 819 NLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
I L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 235 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 281
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 604 FDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVK 653
F++ H +GKG GSV M + +GE++AVKK + ++F E++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 63
Query: 654 ALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
L + H NIVK G C R+L ++ EY SL L + + + +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTS 121
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I + Y+ + +HRD++++N+L++ EN + DFG+ K L D +
Sbjct: 122 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178
Query: 772 G---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSLNLNIA 823
+ APE K + DV+SFGV+ E+ K K P +F+ + I
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 824 --LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 239 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 280
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV E + SL L A +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--I 118
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 119 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 230
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 231 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKK-FHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
+G GG +VY+++ I +A+K F P E T ++ F EV +++ H+NIV +
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR-FEREVHNSSQLSHQNIVSMI 77
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
++V EY + +L+ + + L +N I+D + + H+
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHD---MR 131
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT-ELAGTYGYVAPELAYTMKVTE 786
IVHRDI +N+L+D + DFGIAK L S T + GT Y +PE A E
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 787 KCDVYSFGVLALEVIKGKHP 806
D+YS G++ E++ G+ P
Sbjct: 192 CTDIYSIGIVLYEMLVGEPP 211
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 25/263 (9%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IGKG G V+ + +++A+K L ++ E+ L++ + K YG
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L L+I+ EY S +L L T+ +++ I+ L Y+H++
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KK 145
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRDI + NVLL E ++DFG+A L GT ++APE+ K
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 205
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR--LPTPSRNVHDKLISI 846
D++S G+ A+E+ +G+ P + M L P+ PT N L
Sbjct: 206 DIWSLGITAIELARGEPPHSELHPMKVL----------FLIPKNNPPTLEGNYSKPLKEF 255
Query: 847 VEVTISCVDENPESRPTMQKVCQ 869
VE +C+++ P RPT +++ +
Sbjct: 256 VE---ACLNKEPSFRPTAKELLK 275
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 36/286 (12%)
Query: 604 FDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVK 653
F++ H +GKG GSV M + +GE++AVKK + ++F E++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 81
Query: 654 ALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
L + H NIVK G C R+L ++ EY SL L + + + +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTS 139
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 140 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 772 G---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSLNLNIA 823
+ APE K + DV+SFGV+ E+ K K P +F+ + I
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 824 --LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 257 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 298
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 36/286 (12%)
Query: 604 FDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVK 653
F++ H +GKG GSV M + +GE++AVKK + ++F E++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 81
Query: 654 ALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
L + H NIVK G C R+L ++ EY SL L + + + +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTS 139
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 140 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 772 G---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSLNLNIA 823
+ APE K + DV+SFGV+ E+ K K P +F+ + I
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 824 --LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 257 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 298
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.3 bits (186), Expect = 7e-14, Method: Composition-based stats.
Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 80
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY L L + K L + ++M I ++Y+ + V
Sbjct: 81 VVSEEPIYIVMEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 195 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C ++PE RPT + + L+
Sbjct: 247 -------LMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.3 bits (186), Expect = 7e-14, Method: Composition-based stats.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 28/274 (10%)
Query: 607 EHCIGKGGQGSVYMSKL---ASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
E IG G G V +L EI +A+K + + +++FL+E + + H N
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--RRDFLSEASIMGQFDHPN 70
Query: 663 IVKVYGFCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
I+ + G + + I+ EY + SL A + ND + + M++GI + Y+
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYLS 127
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSNWTELAGTYG--YVAPEL 778
+ + VHRD++++N+L++ VSDFG+++ L+ D + +T G + APE
Sbjct: 128 DMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 779 AYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837
K T DV+S+G++ EV+ G+ P S+ ++ A++E RLP P
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERP-----YWDMSNQDVIKAIEEGY--RLPPPM- 236
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
D I++ ++ + C + RP ++ +L
Sbjct: 237 ---DCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 36/286 (12%)
Query: 604 FDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVK 653
F++ H +GKG GSV M + +GE++AVKK + ++F E++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 63
Query: 654 ALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
L + H NIVK G C R+L ++ EY SL L + + + +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTS 121
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 122 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 772 G---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSLNLNIA 823
+ APE K + DV+SFGV+ E+ K K P +F+ + I
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 824 --LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 239 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 280
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 27/267 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M + +AVK PG M+ Q FL E + + H +V++Y
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK---PGTMSVQA-FLEEANLMKTLQHDKLVRLYAV 75
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ E+ SL L +D K L + ++ I + ++Y+ + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---I 131
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + NVL+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 789 DVYSFGVLALEVIK-GKHP---RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
+V+SFG+L E++ GK P R MS S + PR+ N D+L
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM-------PRM----ENCPDELY 240
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLL 871
I+++ C E E RPT + +L
Sbjct: 241 DIMKM---CWKEKAEERPTFDYLQSVL 264
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 34/271 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 80
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ ++IV EY L L + K L + ++M I ++Y+ + V
Sbjct: 81 VVSEEPIYIVTEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTE 786
HRD+ + N+L+ V+DFG+A+ + + + +T G + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 787 KCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHD 841
K DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 195 KSDVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C ++PE RPT + + L+
Sbjct: 247 -------LMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 36/286 (12%)
Query: 604 FDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVK 653
F++ H +GKG GSV M + +GE++AVKK + ++F E++
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 61
Query: 654 ALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
L + H NIVK G C R+L ++ EY SL L + + + +
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTS 119
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 120 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 176
Query: 772 G---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSLNLNIA 823
+ APE K + DV+SFGV+ E+ K K P +F+ + I
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 236
Query: 824 --LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 237 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 278
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 599 RATNDFDDEHC-----IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEF 648
R F++ H +GKG GSV M + +GE++AVKK + ++F
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 61
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
E++ L + H NIVK G C R+L ++ E+ SL L + + +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK--HKERIDHIKL 119
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+ I + Y+ + +HRD++++N+L++ EN + DFG+ K L D
Sbjct: 120 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 767 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFISSMSFSSL 818
+ APE K + DV+SFGV+ E+ K K P +F+ +
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 819 NLNIA--LDEML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
I L E+L + RLP P D++ I+ C + N RP+ +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 283
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 35/270 (12%)
Query: 610 IGKGGQGSVYM-SKLASG---EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVK 665
+G G G V++ + +SG I + K S +P E + E++ L + H NI+K
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME-----QIEAEIEVLKSLDHPNIIK 84
Query: 666 VYGFCLHVRHLFIVYEYFKMCS----LAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
++ +++IV E C L I+S A K L ++K +++AL+Y H
Sbjct: 85 IFEVFEDYHNMYIVME---TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAH----VSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+ +VH+D+ +N+L + H + DFG+A+ K D + T AGT Y+APE
Sbjct: 142 SQ---HVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPE 196
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837
+ + VT KCD++S GV+ ++ G P + S + E P R
Sbjct: 197 V-FKRDVTFKCDIWSAGVVMYFLLTGCLP---FTGTSLEEVQQKATYKE---PNYAVECR 249
Query: 838 NVHDKLISIVEVTISCVDENPESRPTMQKV 867
+ + + +++ ++ ++PE RP+ +V
Sbjct: 250 PLTPQAVDLLKQMLT---KDPERRPSAAQV 276
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 30/269 (11%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G V+M +A+K PG M+ + FL E + + ++ H +V++Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYA- 70
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ + IV EY SL L + K L + ++M I ++Y+ + V
Sbjct: 71 VVSEEPIXIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 126
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ V+DFG+A+ ++ + + A + APE A + T K
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 789 DVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEM-LDPRLPTP---SRNVHDKL 843
DV+SFG+L E+ KG+ P + + LD++ R+P P ++HD
Sbjct: 187 DVWSFGILLTELTTKGRVP--------YPGMVNREVLDQVERGYRMPCPPECPESLHD-- 236
Query: 844 ISIVEVTISCVDENPESRPTMQKVCQLLK 872
+ C + PE RPT + + L+
Sbjct: 237 -----LMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 25/263 (9%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IGKG G V+ + +++A+K L ++ E+ L++ + K YG
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L L+I+ EY S +L L T+ +++ I+ L Y+H++
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KK 140
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRDI + NVLL E ++DFG+A L GT ++APE+ K
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 200
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR--LPTPSRNVHDKLISI 846
D++S G+ A+E+ +G+ P + M L P+ PT N L
Sbjct: 201 DIWSLGITAIELARGEPPHSELHPMKVL----------FLIPKNNPPTLEGNYSKPLKEF 250
Query: 847 VEVTISCVDENPESRPTMQKVCQ 869
VE +C+++ P RPT +++ +
Sbjct: 251 VE---ACLNKEPSFRPTAKELLK 270
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 18/194 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IGKG G V + G +AVK + Q FL E +T++ H N+V++ G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHSNLVQLLGV 67
Query: 670 CLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ + L+IV EY SL L + + LG + + +A+ Y+ + F
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF--- 123
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTE 786
VHRD++++NVL+ +N A VSDFG+ K ++ T+ G + APE K +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 787 KCDVYSFGVLALEV 800
K DV+SFG+L E+
Sbjct: 179 KSDVWSFGILLWEI 192
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 25/263 (9%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IGKG G V+ + +++A+K L ++ E+ L++ + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L L+I+ EY S +L L T+ +++ I+ L Y+H++
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KK 125
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRDI + NVLL E ++DFG+A L GT ++APE+ K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 185
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR--LPTPSRNVHDKLISI 846
D++S G+ A+E+ +G+ P + M L P+ PT N L
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVL----------FLIPKNNPPTLEGNYSKPLKEF 235
Query: 847 VEVTISCVDENPESRPTMQKVCQ 869
VE +C+++ P RPT +++ +
Sbjct: 236 VE---ACLNKEPSFRPTAKELLK 255
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 18/194 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IGKG G V + G +AVK + Q FL E +T++ H N+V++ G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHSNLVQLLGV 82
Query: 670 CLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ + L+IV EY SL L + + LG + + +A+ Y+ + F
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF--- 138
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTE 786
VHRD++++NVL+ +N A VSDFG+ K ++ T+ G + APE K +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 787 KCDVYSFGVLALEV 800
K DV+SFG+L E+
Sbjct: 194 KSDVWSFGILLWEI 207
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 25/263 (9%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IGKG G V+ + +++A+K L ++ E+ L++ + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L L+I+ EY S +L L T+ +++ I+ L Y+H++
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KK 125
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRDI + NVLL E ++DFG+A L GT ++APE+ K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 185
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR--LPTPSRNVHDKLISI 846
D++S G+ A+E+ +G+ P + M L P+ PT N L
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVL----------FLIPKNNPPTLEGNYSKPLKEF 235
Query: 847 VEVTISCVDENPESRPTMQKVCQ 869
VE +C+++ P RPT +++ +
Sbjct: 236 VE---ACLNKEPSFRPTAKELLK 255
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKK--FHSPLPGEMTFQQEFLNEVKALTEIW 659
+DF+ +GKG G+VY+++ I K F S + E + + E++ +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKE-GVEHQLRREIEIQAHLH 81
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI+++Y + R ++++ EY L L R +++ + DAL Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC---TFDEQRTATIMEELADALMY 138
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
H ++HRDI +N+LL + E ++DFG + + S + GT Y+ PE+
Sbjct: 139 CHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMI 193
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839
EK D++ GVL E++ G P F S+ + + +D +PT ++++
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPP--FESASHNETYRRIVKVDLKFPASVPTGAQDL 251
Query: 840 HDKLI 844
KL+
Sbjct: 252 ISKLL 256
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H NI+++ G + + IV E + SL L A +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--I 147
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + VHRD++++N+L++ VSDFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + +PE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDV 259
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A+DE RLP P D ++ ++ + C ++ +RP +++ +L
Sbjct: 260 IKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 603 DFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTF--QQEFLNEVKALTEIW 659
D++ + IG G G + + + G+I+ K+ G MT +Q ++EV L E+
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQMLVSEVNLLRELK 63
Query: 660 HRNIVKVYGFCLHVRH--LFIVYEYFKMCSLAVILSNDAAAKN-LGWTRRMNMIKGIVDA 716
H NIV+ Y + + L+IV EY + LA +++ + L + ++ + A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 717 LSYMH--NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
L H +D ++HRD+ NV LD + + DFG+A+ L D E GT Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 775 APELAYTMKVTEKCDVYSFGVLALEV 800
+PE M EK D++S G L E+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 232
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 233 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 232
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 233 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 187
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 237
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 238 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 34/288 (11%)
Query: 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNE 651
Y++ D +H +G G G VY + +AVK E T + +EFL E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 263
Query: 652 VKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
+ EI H N+V++ G C +I+ E+ +L L + + + + M
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 322
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I A+ Y+ F +HR+++++N L+ + V+DFG+++ + D+ +T AG
Sbjct: 323 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 377
Query: 772 ---GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDE 826
+ APE LAY K + K DV++FGVL E+ G P + ++L+ + E
Sbjct: 378 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYE 427
Query: 827 ML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+L D R+ P +K + E+ +C NP RP+ ++ Q +
Sbjct: 428 LLEKDYRMERPE-GCPEK---VYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 232
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 233 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 232
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 233 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 603 DFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTF--QQEFLNEVKALTEIW 659
D++ + IG G G + + + G+I+ K+ G MT +Q ++EV L E+
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQMLVSEVNLLRELK 63
Query: 660 HRNIVKVYGFCLHVRH--LFIVYEYFKMCSLAVILSNDAAAKN-LGWTRRMNMIKGIVDA 716
H NIV+ Y + + L+IV EY + LA +++ + L + ++ + A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 717 LSYMH--NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
L H +D ++HRD+ NV LD + + DFG+A+ L D+S GT Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 775 APELAYTMKVTEKCDVYSFGVLALEV 800
+PE M EK D++S G L E+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 34/288 (11%)
Query: 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNE 651
Y++ D +H +G G G VY + +AVK E T + +EFL E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 266
Query: 652 VKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
+ EI H N+V++ G C +I+ E+ +L L + + + + M
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 325
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I A+ Y+ F +HR+++++N L+ + V+DFG+++ + D+ +T AG
Sbjct: 326 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 380
Query: 772 ---GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDE 826
+ APE LAY K + K DV++FGVL E+ G P + ++L+ + E
Sbjct: 381 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYE 430
Query: 827 ML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+L D R+ P +K + E+ +C NP RP+ ++ Q +
Sbjct: 431 LLEKDYRMERP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 187
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 237
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 238 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 232
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 233 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 72
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 132 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 186
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 187 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 236
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 237 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 232
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 233 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 70
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 184
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 185 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 234
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 235 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 70
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 184
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 185 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 234
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 235 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 69
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 129 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPE 183
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 184 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 233
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 234 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 70
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ +T AG + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPE 184
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 185 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 234
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 235 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 603 DFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTF--QQEFLNEVKALTEIW 659
D++ + IG G G + + + G+I+ K+ G MT +Q ++EV L E+
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQMLVSEVNLLRELK 63
Query: 660 HRNIVKVYGFCLHVRH--LFIVYEYFKMCSLAVILSNDAAAKN-LGWTRRMNMIKGIVDA 716
H NIV+ Y + + L+IV EY + LA +++ + L + ++ + A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 717 LSYMH--NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
L H +D ++HRD+ NV LD + + DFG+A+ L D+S GT Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 775 APELAYTMKVTEKCDVYSFGVLALEV 800
+PE M EK D++S G L E+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 22/267 (8%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
E +G G G V+M+ +AVK PG M+ + FL E + + H +VK+
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA-FLAEANVMKTLQHDKLVKL 75
Query: 667 YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
+ ++I+ E+ SL L +D +K + ++ I + ++++ +
Sbjct: 76 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY- 132
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVT 785
+HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T
Sbjct: 133 --IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 786 EKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
K DV+SFG+L +E++ G+ P +S+ AL+ R+P P N ++L
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR-----ALERGY--RMPRP-ENCPEELY 242
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLL 871
+I+ + C PE RPT + + +L
Sbjct: 243 NIM---MRCWKNRPEERPTFEYIQSVL 266
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 34/288 (11%)
Query: 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNE 651
Y++ D +H +G G G VY + +AVK E T + +EFL E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 305
Query: 652 VKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
+ EI H N+V++ G C +I+ E+ +L L + + + + M
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 364
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I A+ Y+ F +HR+++++N L+ + V+DFG+++ + D+ +T AG
Sbjct: 365 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 419
Query: 772 ---GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDE 826
+ APE LAY K + K DV++FGVL E+ G P + ++L+ + E
Sbjct: 420 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYE 469
Query: 827 ML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+L D R+ P +K + E+ +C NP RP+ ++ Q +
Sbjct: 470 LLEKDYRMERPE-GCPEK---VYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 607 EHCIGKGGQGSVYMSKL---ASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
E IG G G V L EI +A+K S + +++FL+E + + H N
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ--RRDFLSEASIMGQFDHPN 69
Query: 663 IVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
++ + G + I+ E+ + SL L + + + + M++GI + Y+ +
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYLAD 127
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG-----YVAPE 777
+ VHR ++++N+L++ VSDFG+++FL+ D+S+ T + G + APE
Sbjct: 128 MNY---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
K T DV+S+G++ EV+ G+ P M+ + I D L P + PS
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDVINAIEQDYRLPPPMDCPS 241
Query: 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
++ ++ + C ++ RP ++ L
Sbjct: 242 --------ALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 88
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L A+ + +++ + + Y+H I+
Sbjct: 89 STKPQ-LAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPELAYTMK 783
HRD+ S N+ L +N + DFG+A + S W+ +L+G+ ++APE+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 784 ---VTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEM-----LDPRLPTP 835
+ + DVY+FG++ E++ G+ P +S++N + EM L P L
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIEMVGRGSLSPDLSKV 250
Query: 836 SRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
N ++ ++ C+ + + RP+ ++
Sbjct: 251 RSNCPKRMKRLM---AECLKKKRDERPSFPRI 279
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 130/286 (45%), Gaps = 43/286 (15%)
Query: 610 IGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G V++++ ++AVK P + +++F E + LT + H +I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHI 79
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSL----------AVILSND---AAAKNLGWTRRMNMI 710
VK YG C L +V+EY K L A+IL + A LG ++ +++
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 711 KGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG- 769
I + Y+ + F VHRD++++N L+ + DFG+++ + S+++ + G
Sbjct: 140 SQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRDVY--STDYYRVGGH 194
Query: 770 ---TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++ PE K T + DV+SFGV+ E+ GK P +S + + I
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP---WFQLSNTEVIECITQG 251
Query: 826 EMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
+L+ P + +V + C P+ R ++++ ++L
Sbjct: 252 RVLERPRVCPK--------EVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 22/267 (8%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
E +G G G V+M+ +AVK PG M+ + FL E + + H +VK+
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA-FLAEANVMKTLQHDKLVKL 248
Query: 667 YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
+ ++I+ E+ SL L +D +K + ++ I + ++++ +
Sbjct: 249 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY- 305
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVT 785
+HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T
Sbjct: 306 --IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 786 EKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLI 844
K DV+SFG+L +E++ G+ P S+ + AL+ R+P P N ++L
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYP-----GMSNPEVIRALERGY--RMPRPE-NCPEELY 415
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLL 871
+I+ + C PE RPT + + +L
Sbjct: 416 NIM---MRCWKNRPEERPTFEYIQSVL 439
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 30/268 (11%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 76
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L A+ + +++ + + Y+H I+
Sbjct: 77 STKPQ-LAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 730 HRDISSKNVLLDFENEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMK---V 784
HRD+ S N+ L +N + DFG+A K S + +L+G+ ++APE+
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 785 TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEM-----LDPRLPTPSRNV 839
+ + DVY+FG++ E++ G+ P +S++N + EM L P L N
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIEMVGRGSLSPDLSKVRSNC 242
Query: 840 HDKLISIVEVTISCVDENPESRPTMQKV 867
++ ++ C+ + + RP+ ++
Sbjct: 243 PKRMKRLM---AECLKKKRDERPSFPRI 267
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 604 FDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
F D IG G G+VY ++ + + E++A+KK Q+ + EV+ L ++ H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 663 IVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
++ G L ++V EY + S + +L + K L + G + L+Y+H+
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 782
++HRD+ + N+LL + DFG A + P + GT ++APE+ M
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAM 225
Query: 783 KVTE---KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839
+ K DV+S G+ +E+ + K P + +M+ S +IA +E P L S +
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNE--SPAL--QSGHW 278
Query: 840 HDKLISIVEVTISCVDENPESRPT 863
+ + V+ SC+ + P+ RPT
Sbjct: 279 SEYFRNFVD---SCLQKIPQDRPT 299
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
++ + + +GKG G V + K +G+ AVK + T ++ L EV+ L ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI+K+Y F + ++V E + L + K +I+ ++ ++Y
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAP 776
MH + IVHRD+ +N+LL+ +++ + DFG++ + S + GT Y+AP
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 220
Query: 777 ELAYTMKVTEKCDVYSFGVL 796
E+ + EKCDV+S GV+
Sbjct: 221 EVLHGT-YDEKCDVWSTGVI 239
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 12/210 (5%)
Query: 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
++ + + +GKG G V + K +G+ AVK + T ++ L EV+ L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI+K+Y F + ++V E + L + K +I+ ++ ++Y
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAP 776
MH + IVHRD+ +N+LL+ +++ + DFG++ + S + GT Y+AP
Sbjct: 142 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 197
Query: 777 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
E+ + EKCDV+S GV+ ++ G P
Sbjct: 198 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 18/194 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IGKG G V + G +AVK + Q FL E +T++ H N+V++ G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHSNLVQLLGV 254
Query: 670 CLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ + L+IV EY SL L + + LG + + +A+ Y+ + F
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNNF--- 310
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTE 786
VHRD++++NVL+ +N A VSDFG+ K ++ T+ G + APE K +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFST 365
Query: 787 KCDVYSFGVLALEV 800
K DV+SFG+L E+
Sbjct: 366 KSDVWSFGILLWEI 379
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
++ + + +GKG G V + K +G+ AVK + T ++ L EV+ L ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI+K+Y F + ++V E + L + K +I+ ++ ++Y
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAP 776
MH + IVHRD+ +N+LL+ +++ + DFG++ + S + GT Y+AP
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 221
Query: 777 ELAYTMKVTEKCDVYSFGVL 796
E+ + EKCDV+S GV+
Sbjct: 222 EVLHGT-YDEKCDVWSTGVI 240
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 88
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
L IV ++ + SL L A+ + +++ + + Y+H I+
Sbjct: 89 ST-APQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPELAYTMK 783
HRD+ S N+ L +N + DFG+A + S W+ +L+G+ ++APE+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 784 ---VTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEM-----LDPRLPTP 835
+ + DVY+FG++ E++ G+ P +S++N + EM L P L
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIEMVGRGSLSPDLSKV 250
Query: 836 SRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
N ++ ++ C+ + + RP+ ++
Sbjct: 251 RSNCPKRMKRLM---AECLKKKRDERPSFPRI 279
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 34/288 (11%)
Query: 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNE 651
Y++ D +H +G G G VY + +AVK E T + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 64
Query: 652 VKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
+ EI H N+V++ G C +I+ E+ +L L + + + + M
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 123
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT- 770
I A+ Y+ F +HRD++++N L+ + V+DFG+++ + D+ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 771 --YGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDE 826
+ APE LAY K + K DV++FGVL E+ G P + ++L+ + E
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYE 228
Query: 827 ML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+L D R+ P + E+ +C NP RP+ ++ Q +
Sbjct: 229 LLEKDYRMERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 136/268 (50%), Gaps = 27/268 (10%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G G VY +K +G + A K + E+ ++++ E++ L H IVK+ G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 75
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
H L+I+ E+ ++ A++L D + L + + + +++AL+++H+
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHSK---R 129
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGI-AKFLKPDSSNWTELAGTYGYVAPE--LAYTMKV 784
I+HRD+ + NVL+ E + ++DFG+ AK LK GT ++APE + TMK
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKD 188
Query: 785 TE---KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
T K D++S G+ +E+ + + P ++ M + L IA + P L TPS+
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHELNPM---RVLLKIAKSD--PPTLLTPSKWS-- 241
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQ 869
+ + +D+NPE+RP+ ++ +
Sbjct: 242 --VEFRDFLKIALDKNPETRPSAAQLLE 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 69
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ T AG + APE
Sbjct: 129 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 183
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 184 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 233
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 234 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IGKG G V + G +AVK + Q FL E +T++ H N+V++ G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHSNLVQLLGV 73
Query: 670 CLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ + L+IV EY SL L + + LG + + +A+ Y+ + F
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF--- 129
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTE 786
VHRD++++NVL+ +N A VSDFG+ K ++ T+ G + APE +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFST 184
Query: 787 KCDVYSFGVLALEV 800
K DV+SFG+L E+
Sbjct: 185 KSDVWSFGILLWEI 198
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 136/268 (50%), Gaps = 27/268 (10%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G G VY +K +G + A K + E+ ++++ E++ L H IVK+ G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 83
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
H L+I+ E+ ++ A++L D + L + + + +++AL+++H+
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHSK---R 137
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGI-AKFLKPDSSNWTELAGTYGYVAPE--LAYTMKV 784
I+HRD+ + NVL+ E + ++DFG+ AK LK GT ++APE + TMK
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKD 196
Query: 785 TE---KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
T K D++S G+ +E+ + + P ++ M + L IA + P L TPS+
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPM---RVLLKIAKSD--PPTLLTPSKWS-- 249
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQ 869
+ + +D+NPE+RP+ ++ +
Sbjct: 250 --VEFRDFLKIALDKNPETRPSAAQLLE 275
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 34/276 (12%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ T AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 187
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML--DPRLP 833
LAY K + K DV++FGVL E+ G P + ++L+ + E+L D R+
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYELLEKDYRME 237
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
P +K + E+ +C NP RP+ ++ Q
Sbjct: 238 RP-EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 34/288 (11%)
Query: 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNE 651
Y++ D +H +G G G VY + +AVK E T + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 64
Query: 652 VKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
+ EI H N+V++ G C +I+ E+ +L L + + + + M
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 123
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT- 770
I A+ Y+ F +HRD++++N L+ + V+DFG+++ + D+ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 771 --YGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDE 826
+ APE LAY K + K DV++FGVL E+ G P + ++L+ + E
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLS-QVYE 228
Query: 827 ML--DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
+L D R+ P + E+ +C NP RP+ ++ Q +
Sbjct: 229 LLEKDYRMERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 12/210 (5%)
Query: 601 TNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
++ + + +GKG G V + K +G+ AVK + T ++ L EV+ L ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI+K+Y F + ++V E + L + K +I+ ++ ++Y
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGTYGYVAP 776
MH + IVHRD+ +N+LL+ +++ + DFG++ + S + GT Y+AP
Sbjct: 148 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 203
Query: 777 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
E+ + EKCDV+S GV+ ++ G P
Sbjct: 204 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 124/274 (45%), Gaps = 30/274 (10%)
Query: 603 DFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIWH 660
D +H +G G G VY + +AVK E T + +EFL E + EI H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 66
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
N+V++ G C +I+ E+ +L L + + + + M I A+ Y+
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 777
F +HRD++++N L+ + V+DFG+++ + D+ T AG + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 778 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP 835
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL-----LEK--DYRMERP 232
Query: 836 SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
+K + E+ +C NP RP+ ++ Q
Sbjct: 233 -EGCPEK---VYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 604 FDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
F D IG G G+VY ++ + + E++A+KK Q+ + EV+ L ++ H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 663 IVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
++ G L ++V EY + S + +L + K L + G + L+Y+H+
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 782
++HRD+ + N+LL + DFG A + P + GT ++APE+ M
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAM 186
Query: 783 KVTE---KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839
+ K DV+S G+ +E+ + K P + +M+ S +IA +E P L S +
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNE--SPAL--QSGHW 239
Query: 840 HDKLISIVEVTISCVDENPESRPT 863
+ + V+ SC+ + P+ RPT
Sbjct: 240 SEYFRNFVD---SCLQKIPQDRPT 260
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 116/262 (44%), Gaps = 23/262 (8%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IGKG G VY + E++A+K L ++ E+ L++ I + +G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L L+I+ EY S +L L T +++ I+ L Y+H++
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHSER---K 137
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRDI + NVLL + + ++DFG+A L GT ++APE+ K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS-RNVHDKLISIV 847
D++S G+ A+E+ KG+ P + M L P+ P+ H K
Sbjct: 198 DIWSLGITAIELAKGEPPNSDLHPMRVL----------FLIPKNSPPTLEGQHSK--PFK 245
Query: 848 EVTISCVDENPESRPTMQKVCQ 869
E +C++++P RPT +++ +
Sbjct: 246 EFVEACLNKDPRFRPTAKELLK 267
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 129/296 (43%), Gaps = 46/296 (15%)
Query: 609 CIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
C+GKG G V+ GE +AVK F S + E N V + H NI+
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 98
Query: 669 FCLHVRH----LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ RH L+++ Y +M SL L L + ++ I L+++H +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 725 F-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-----GTYGYV 774
F P I HRD+ SKN+L+ + ++D G+A + S+N ++ GT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 775 APE-LAYTMKVT-----EKCDVYSFGVLALEVIKGKHPRDFISSM------------SFS 816
APE L T++V ++ D+++FG++ EV + + SF
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 273
Query: 817 SLNLNIALDEMLDPRLPTPSRNVHD-KLISIVEVTISCVDENPESRPTMQKVCQLL 871
+ + +D+ R P+R D L S+ ++ C +NP +R T ++ + L
Sbjct: 274 DMRKVVCVDQQ---RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 326
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 30/266 (11%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
E +G G G V+M+ +AVK PG M+ + FL E + + H +VK+
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA-FLAEANVMKTLQHDKLVKL 242
Query: 667 YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
+ ++I+ E+ SL L +D +K + ++ I + ++++ +
Sbjct: 243 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY- 299
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 786
+HRD+ + N+L+ ++DFG+A+ WT APE T
Sbjct: 300 --IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGSFTI 348
Query: 787 KCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLIS 845
K DV+SFG+L +E++ G+ P S+ + AL+ R+P P N ++L +
Sbjct: 349 KSDVWSFGILLMEIVTYGRIPYP-----GMSNPEVIRALERGY--RMPRPE-NCPEELYN 400
Query: 846 IVEVTISCVDENPESRPTMQKVCQLL 871
I+ + C PE RPT + + +L
Sbjct: 401 IM---MRCWKNRPEERPTFEYIQSVL 423
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 45/290 (15%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVK 665
E +G G G+V G +AVK+ + F L E+K LTE H N+++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIR 91
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN---MIKGIVDALSYMHN 722
Y R L+I E + ++ S + + +NL + N +++ I ++++H+
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 723 DCFPPIVHRDISSKNVLL--------DFENEAH-----VSDFGIAKFLKPDS----SNWT 765
I+HRD+ +N+L+ D + A +SDFG+ K L N
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 766 ELAGTYGYVAPEL---AYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLN 821
+GT G+ APEL + ++T D++S G + ++ KGKHP S + +
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 268
Query: 822 IALDEMLDPRLPTPSRNVHDK--LISIVEVTISCVDENPESRPTMQKVCQ 869
+LDEM + +HD+ + ++ +D +P RPT KV +
Sbjct: 269 FSLDEM---------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVK 665
E +G G G+V G +AVK+ + F L E+K LTE H N+++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIR 73
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN---MIKGIVDALSYMHN 722
Y R L+I E + ++ S + + +NL + N +++ I ++++H+
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 723 DCFPPIVHRDISSKNVLL--------DFENEAH-----VSDFGIAKFLKPDSS----NWT 765
I+HRD+ +N+L+ D + A +SDFG+ K L S N
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 766 ELAGTYGYVAPE-------LAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSS 817
+GT G+ APE L ++T D++S G + ++ KGKHP S +
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250
Query: 818 LNLNIALDEMLDPRLPTPSRNVHDK--LISIVEVTISCVDENPESRPTMQKVCQ 869
+ +LDEM + +HD+ + ++ +D +P RPT KV +
Sbjct: 251 IRGIFSLDEM---------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 610 IGKGGQGSVYMSKLASG------EIIAVKKFHSPLPGE-----MTFQQEFLNEVKALTEI 658
+G G G V + K +G ++I +F + F +E NE+ L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NI+K++ ++ ++V E+++ L + N N++K I+ +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGIC 160
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGTYGYVA 775
Y+H IVHRDI +N+LL+ +N + DFG++ F D L Y Y+A
Sbjct: 161 YLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY-YIA 216
Query: 776 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
PE+ K EKCDV+S GV+ ++ G P
Sbjct: 217 PEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 42/235 (17%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALT 656
+R +DF++ +G+G G V ++ A A+KK T L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVMLLA 57
Query: 657 EIWHRNIVKVYGFCLHVRH-------------LFIVYEYFKMCSLAVILSNDAAAKNLGW 703
+ H+ +V+ Y L R+ LFI EY + +L ++ ++ NL
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE----NLNQ 113
Query: 704 TRR--MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK------ 755
R + + I++ALSY+H+ I+HRD+ N+ +D + DFG+AK
Sbjct: 114 QRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 756 -FLKPDSS-------NWTELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI 801
LK DS N T GT YVA E L T EK D+YS G++ E+I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 42/235 (17%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALT 656
+R +DF++ +G+G G V ++ A A+KK T L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVMLLA 57
Query: 657 EIWHRNIVKVYGFCLHVRH-------------LFIVYEYFKMCSLAVILSNDAAAKNLGW 703
+ H+ +V+ Y L R+ LFI EY + +L ++ ++ NL
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE----NLNQ 113
Query: 704 TRR--MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK------ 755
R + + I++ALSY+H+ I+HRD+ N+ +D + DFG+AK
Sbjct: 114 QRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 756 -FLKPDSS-------NWTELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI 801
LK DS N T GT YVA E L T EK D+YS G++ E+I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 45/290 (15%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVK 665
E +G G G+V G +AVK+ + F L E+K LTE H N+++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIR 91
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN---MIKGIVDALSYMHN 722
Y R L+I E + ++ S + + +NL + N +++ I ++++H+
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 723 DCFPPIVHRDISSKNVLL--------DFENEAH-----VSDFGIAKFLKPDS----SNWT 765
I+HRD+ +N+L+ D + A +SDFG+ K L N
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 766 ELAGTYGYVAPEL---AYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLN 821
+GT G+ APEL + ++T D++S G + ++ KGKHP S + +
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 268
Query: 822 IALDEMLDPRLPTPSRNVHDK--LISIVEVTISCVDENPESRPTMQKVCQ 869
+LDEM + +HD+ + ++ +D +P RPT KV +
Sbjct: 269 FSLDEM---------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 85 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 139
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 200 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 252
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 253 L---CWKERPEDRPTFDYLRSVLE 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 192 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 244
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 245 L---CWKERPEDRPTFDYLRSVLE 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 192 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 244
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 245 L---CWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 137
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 198 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 250
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 251 L---CWKERPEDRPTFDYLRSVLE 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 78 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 132
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 193 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 245
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 246 L---CWKERPEDRPTFDYLRSVLE 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 79 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 133
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 194 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 246
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 247 L---CWKERPEDRPTFDYLRSVLE 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 86 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 140
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 201 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 253
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 254 L---CWKERPEDRPTFDYLRSVLE 274
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 124/278 (44%), Gaps = 30/278 (10%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIW 659
D +H +G G G VY + +AVK E T + +EFL E + EI
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIK 65
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H N+V++ G C +I+ E+ +L L + + + + M I A+ Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEY 124
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAP 776
+ F +HRD++++N L+ + V+DFG+++ + D+ +T AG + AP
Sbjct: 125 LEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAP 179
Query: 777 E-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
E LAY K + K DV++FGVL E+ G P I L L++ D R+
Sbjct: 180 ESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL-----LEK--DYRMER 231
Query: 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
P + E+ +C NP RP+ ++ Q +
Sbjct: 232 PEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ E A + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 192 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 244
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 245 L---CWKERPEDRPTFDYLRSVLE 265
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 42/281 (14%)
Query: 610 IGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G V++++ ++AVK + +Q+F E + LT + H++I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 105
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVIL------------SNDAAAKNLGWTRRMNMIK 711
V+ +G C R L +V+EY + L L D A LG + + +
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT- 770
+ + Y+ F VHRD++++N L+ + DFG+++ + S+++ + G
Sbjct: 166 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 220
Query: 771 ---YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDE 826
++ PE K T + DV+SFGV+ E+ GK P +S+ +++ E
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCITQGRE 278
Query: 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
+ PR P + + C P+ R +++ V
Sbjct: 279 LERPRACPP---------EVYAIMRGCWQREPQQRHSIKDV 310
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 129/296 (43%), Gaps = 46/296 (15%)
Query: 609 CIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
C+GKG G V+ GE +AVK F S + E N V + H NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 69
Query: 669 FCLHVRH----LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ RH L+++ Y +M SL L L + ++ I L+++H +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 725 F-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-----GTYGYV 774
F P I HRD+ SKN+L+ + ++D G+A + S+N ++ GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 775 APE-LAYTMKVT-----EKCDVYSFGVLALEVIKGKHPRDFISSM------------SFS 816
APE L T++V ++ D+++FG++ EV + + SF
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 244
Query: 817 SLNLNIALDEMLDPRLPTPSRNVHD-KLISIVEVTISCVDENPESRPTMQKVCQLL 871
+ + +D+ R P+R D L S+ ++ C +NP +R T ++ + L
Sbjct: 245 DMRKVVCVDQQ---RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 137
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 198 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 250
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 251 L---CWKERPEDRPTFDYLRSVLE 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 87 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 141
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 202 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 254
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 255 L---CWKERPEDRPTFDYLRSVLE 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 192 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 244
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 245 L---CWKERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 72 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 126
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 187 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 239
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 240 L---CWKERPEDRPTFDYLRSVLE 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 82 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 136
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 197 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 249
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 250 L---CWKERPEDRPTFDYLRSVLE 270
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 13/272 (4%)
Query: 603 DFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
+F E IG+G VY + L G +A+KK + + + + E+ L ++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRM-NMIKGIVDALSYM 720
N++K Y + L IV E L+ ++ + K L R + + AL +M
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRDI NV + + D G+ +F ++ L GT Y++PE +
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840
K D++S G L E+ + P + M+ SL I E D P PS +
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPF-YGDKMNLYSLCKKI---EQCD-YPPLPSDHYS 264
Query: 841 DKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
++L +V + C++ +PE RP + V + K
Sbjct: 265 EELRQLVNM---CINPDPEKRPDVTYVYDVAK 293
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 129/296 (43%), Gaps = 46/296 (15%)
Query: 609 CIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
C+GKG G V+ GE +AVK F S + E N V + H NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 69
Query: 669 FCLHVRH----LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ RH L+++ Y +M SL L L + ++ I L+++H +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 725 F-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-----GTYGYV 774
F P I HRD+ SKN+L+ + ++D G+A + S+N ++ GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 775 APE-LAYTMKVT-----EKCDVYSFGVLALEVIKGKHPRDFISSM------------SFS 816
APE L T++V ++ D+++FG++ EV + + SF
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 244
Query: 817 SLNLNIALDEMLDPRLPTPSRNVHD-KLISIVEVTISCVDENPESRPTMQKVCQLL 871
+ + +D+ R P+R D L S+ ++ C +NP +R T ++ + L
Sbjct: 245 DMRKVVCVDQQ---RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 30/278 (10%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIW 659
D +H +G G G VY + +AVK E T + +EFL E + EI
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIK 65
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H N+V++ G C +I+ E+ +L L + + + + M I A+ Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEY 124
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAP 776
+ F +HRD++++N L+ + V+DFG+++ + D+ T AG + AP
Sbjct: 125 LEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAP 179
Query: 777 E-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
E LAY K + K DV++FGVL E+ G P I L L++ D R+
Sbjct: 180 ESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL-----LEK--DYRMER 231
Query: 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
P + E+ +C NP RP+ ++ Q +
Sbjct: 232 PEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG+G G VY ++ GE A+KK E + E+ L E+ H NIVK+Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDV 68
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L +V+E+ L +L D L + + +++ ++Y H+ ++
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKC 788
HRD+ +N+L++ E E ++DFG+A+ +T T Y AP+ L + K +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 789 DVYSFGVLALEVIKG 803
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG+G G VY ++ GE A+KK E + E+ L E+ H NIVK+Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDV 68
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L +V+E+ L +L D L + + +++ ++Y H+ ++
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKC 788
HRD+ +N+L++ E E ++DFG+A+ +T T Y AP+ L + K +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 789 DVYSFGVLALEVIKG 803
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 596 EIIR--ATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVK 653
+I+R T F H I G Y K+ EI+ K Q E N+ +
Sbjct: 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK-----------QVEHTNDER 57
Query: 654 -ALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
L+ + H I++++G + +F++ +Y + L +L N
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN---PVAKFYAAE 114
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
+ AL Y+H+ I++RD+ +N+LLD ++DFG AK++ PD + L GT
Sbjct: 115 VCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXLCGTPD 168
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ T + D +SFG+L E++ G P
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 31/287 (10%)
Query: 594 YEEIIRATNDFDDEHCIGKGGQ-GSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEV 652
YE + R N D IG+ G G VY ++ ++A K E ++++ E+
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEI 58
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIK 711
L H NIVK+ + +L+I+ E+ ++ AV+L + + L ++ + K
Sbjct: 59 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCK 115
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI-AKFLKPDSSNWTELAGT 770
+DAL+Y+H++ I+HRD+ + N+L + + ++DFG+ AK + GT
Sbjct: 116 QTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 771 YGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALD 825
++APE+ + K DV+S G+ +E+ + + P ++ M + L IA
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM---RVLLKIAKS 229
Query: 826 EMLDPRLPTPSR---NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
E P L PSR N D L C+++N ++R T ++ Q
Sbjct: 230 E--PPTLAQPSRWSSNFKDFL-------KKCLEKNVDARWTTSQLLQ 267
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
++ + + +GKG G V + K +G+ AVK + T ++ L EV+ L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI K+Y F + ++V E + L + K +I+ ++ ++Y
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAP 776
H + IVHRD+ +N+LL+ +++ + DFG++ + S + GT Y+AP
Sbjct: 142 XHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKDKIGTAYYIAP 197
Query: 777 ELAYTMKVTEKCDVYSFGVL 796
E+ + EKCDV+S GV+
Sbjct: 198 EVLHGT-YDEKCDVWSTGVI 216
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG+G G VY ++ GE A+KK E + E+ L E+ H NIVK+Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDV 68
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L +V+E+ L +L D L + + +++ ++Y H+ ++
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKC 788
HRD+ +N+L++ E E ++DFG+A+ +T T Y AP+ L + K +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 789 DVYSFGVLALEVIKG 803
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 49/294 (16%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVK 665
E +G G G+V G +AVK+ + F L E+K LTE H N+++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIR 73
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN---MIKGIVDALSYMHN 722
Y R L+I E + ++ S + + +NL + N +++ I ++++H+
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 723 DCFPPIVHRDISSKNVLL--------DFENEAH-----VSDFGIAKFLKPDS----SNWT 765
I+HRD+ +N+L+ D + A +SDFG+ K L N
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 766 ELAGTYGYVAPE-------LAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSS 817
+GT G+ APE L ++T D++S G + ++ KGKHP S +
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250
Query: 818 LNLNIALDEMLDPRLPTPSRNVHDK--LISIVEVTISCVDENPESRPTMQKVCQ 869
+ +LDEM + +HD+ + ++ +D +P RPT KV +
Sbjct: 251 IRGIFSLDEM---------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 42/281 (14%)
Query: 610 IGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G V++++ ++AVK + +Q+F E + LT + H++I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 76
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVIL------------SNDAAAKNLGWTRRMNMIK 711
V+ +G C R L +V+EY + L L D A LG + + +
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT- 770
+ + Y+ F VHRD++++N L+ + DFG+++ + S+++ + G
Sbjct: 137 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 191
Query: 771 ---YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDE 826
++ PE K T + DV+SFGV+ E+ GK P +S+ +++ E
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCITQGRE 249
Query: 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
+ PR P + + C P+ R +++ V
Sbjct: 250 LERPRACPP---------EVYAIMRGCWQREPQQRHSIKDV 281
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 42/281 (14%)
Query: 610 IGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G V++++ ++AVK + +Q+F E + LT + H++I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 82
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVIL------------SNDAAAKNLGWTRRMNMIK 711
V+ +G C R L +V+EY + L L D A LG + + +
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT- 770
+ + Y+ F VHRD++++N L+ + DFG+++ + S+++ + G
Sbjct: 143 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 197
Query: 771 ---YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDE 826
++ PE K T + DV+SFGV+ E+ GK P +S+ +++ E
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCITQGRE 255
Query: 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
+ PR P + + C P+ R +++ V
Sbjct: 256 LERPRACPP---------EVYAIMRGCWQREPQQRHSIKDV 287
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 603 DFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
DF + +GKG VY ++ + +G +A+K + Q NEVK ++ H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+I+++Y + ++++V E + L N K + + I+ + Y+H
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLH 129
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK-PDSSNWTELAGTYGYVAPELAY 780
+ I+HRD++ N+LL ++DFG+A LK P ++T L GT Y++PE+A
Sbjct: 130 SH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIAT 185
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHPRD 808
+ DV+S G + ++ G+ P D
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 104/235 (44%), Gaps = 42/235 (17%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALT 656
+R +DF++ +G+G G V ++ A A+KK T L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVXLLA 57
Query: 657 EIWHRNIVKVYGFCLHVRH-------------LFIVYEYFKMCSLAVILSNDAAAKNLGW 703
+ H+ +V+ Y L R+ LFI EY + +L ++ ++ NL
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE----NLNQ 113
Query: 704 TRR--MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK------ 755
R + + I++ALSY+H+ I+HR++ N+ +D + DFG+AK
Sbjct: 114 QRDEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 756 -FLKPDSS-------NWTELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI 801
LK DS N T GT YVA E L T EK D YS G++ E I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G G G V+M +AVK G M+ FL E + ++ H+ +V++Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
++I+ EY + SL L + K L + ++M I + ++++ + +
Sbjct: 73 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 127
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 788
HR++ + N+L+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+SFG+L E++ H R M+ + N+ R+ P N ++L ++
Sbjct: 188 DVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPD-NCPEELYQLMR 240
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ C E PE RPT + +L+
Sbjct: 241 L---CWKERPEDRPTFDYLRSVLE 261
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 38/312 (12%)
Query: 581 GLLSVLTFEG----KIIYEEIIRATNDFDDEHCIGKGGQGSVYM---SKLASGEIIAVKK 633
G L VL F+G + ++ ++ D + H G+ S+Y + +GE++AVK
Sbjct: 13 GALEVL-FQGPGDPTVFHKRYLKKIRDLGEGHF----GKVSLYCYDPTNDGTGEMVAVKA 67
Query: 634 FHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFC--LHVRHLFIVYEYFKMCSLAVI 691
+ + + + E+ L ++H +I+K G C L +V EY + SL
Sbjct: 68 LKADAGPQ--HRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY 125
Query: 692 LSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDF 751
L ++G + + + I + ++Y+H + +HRD++++NVLLD + + DF
Sbjct: 126 LPR----HSIGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLDNDRLVKIGDF 178
Query: 752 GIAKFLKPDSSNW---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI-----KG 803
G+AK + + + + APE K DV+SFGV E++
Sbjct: 179 GLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238
Query: 804 KHPRDFISSMSFSSLNLNI-ALDEMLD--PRLPTPSRNVHDKLISIVEVTISCVDENPES 860
P F+ + + + + L E+L+ RLP P + + + + +C +
Sbjct: 239 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAE----VYHLMKNCWETEASF 294
Query: 861 RPTMQKVCQLLK 872
RPT + + +LK
Sbjct: 295 RPTFENLIPILK 306
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 20/231 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
+++FL E + + H N+V + G + + IV E+ + +L L +
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--I 145
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD-SSN 763
+ + M++GI + Y+ + + VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 146 QLVGMLRGIAAGMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV 202
Query: 764 WTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820
+T G + APE K T DV+S+G++ EV+ G+ P S+ ++
Sbjct: 203 YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-----YWDMSNQDV 257
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
A++E RLP P D + ++ + C + RP +++ +L
Sbjct: 258 IKAIEEGY--RLPAPM----DCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 40/284 (14%)
Query: 610 IGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G V++++ ++AVK +++F E + LT + H +I
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD---ASDNARKDFHREAELLTNLQHEHI 77
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSL----------AVILSNDAAAKNLGWTRRMNMIKGI 713
VK YG C+ L +V+EY K L AV+++ L ++ +++ + I
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 714 VDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG---- 769
+ Y+ + F VHRD++++N L+ + DFG+++ + S+++ + G
Sbjct: 138 AAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMSRDVY--STDYYRVGGHTML 192
Query: 770 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML 828
++ PE K T + DV+S GV+ E+ GK P + L+ N ++ +
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP--------WYQLSNNEVIECIT 244
Query: 829 DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
R+ R + + E+ + C P R ++ + LL+
Sbjct: 245 QGRVLQRPRTCPQE---VYELMLGCWQREPHMRKNIKGIHTLLQ 285
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 28/263 (10%)
Query: 624 ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYE 681
+GE++AVK + + + + E+ L ++H +I+K G C + L +V E
Sbjct: 41 GTGEMVAVKALKADCGPQ--HRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 682 YFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD 741
Y + SL L + +G + + + I + ++Y+H+ + +HR+++++NVLLD
Sbjct: 99 YVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLLD 151
Query: 742 FENEAHVSDFGIAKFLKPDSSNWTELA----GTYGYVAPELAYTMKVTEKCDVYSFGVLA 797
+ + DFG+AK + P+ + + + APE K DV+SFGV
Sbjct: 152 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 798 LEVI-----KGKHPRDFISSMSFSSLNLNI-ALDEMLD--PRLPTPSRNVHDKLISIVEV 849
E++ P F+ + + + + L E+L+ RLP P + + +
Sbjct: 211 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP----CEVYHL 266
Query: 850 TISCVDENPESRPTMQKVCQLLK 872
+C + RPT + + +LK
Sbjct: 267 MKNCWETEASFRPTFENLIPILK 289
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G G VY + + +G++ A+K E +QE +N +K + HRNI YG
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE-INMLKKYSH--HRNIATYYG 88
Query: 669 FCLHVR------HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
+ L++V E+ S+ ++ N L + + I+ LS++H
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGLSHLHQ 147
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 782
++HRDI +NVLL E + DFG++ L GT ++APE+
Sbjct: 148 H---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204
Query: 783 KVTE-----KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-- 835
+ + K D++S G+ A+E+ +G P ++ AL L PR P P
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPP--------LCDMHPMRAL--FLIPRNPAPRL 254
Query: 836 -SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
S+ K S +E SC+ +N RP + QL+K
Sbjct: 255 KSKKWSKKFQSFIE---SCLVKNHSQRPATE---QLMK 286
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 596 EIIRATNDFDDEHCIGKGGQGSV-YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKA 654
EI+RA IGKG G V + K + ++ A+K + E + E++
Sbjct: 18 EILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQI 68
Query: 655 LTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
+ + H +V ++ +F+V + L L + K T ++ I +V
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE--TVKL-FICELV 125
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL Y+ N I+HRD+ N+LLD H++DF IA L P + T +AGT Y+
Sbjct: 126 MALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYM 181
Query: 775 APELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISSMS 814
APE+ + K + D +S GV A E+++G+ P SS S
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS 224
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 123/284 (43%), Gaps = 42/284 (14%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIW 659
D +H +G G G VY+ + +AVK E T + +EFL E + EI
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIK 86
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H N+V++ G C +IV EY +L L + + + + M I A+ Y
Sbjct: 87 HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEY 145
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAP 776
+ F +HRD++++N L+ + V+DFG+++ + D+ +T AG + AP
Sbjct: 146 LEKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAP 200
Query: 777 E-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD------EML 828
E LAY + K DV++FGVL E+ G P + ++L+ D M
Sbjct: 201 ESLAYN-TFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYDLLEKGYRME 251
Query: 829 DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
P P + E+ +C +P RP+ + Q +
Sbjct: 252 QPEGCPP---------KVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 28/263 (10%)
Query: 624 ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYE 681
+GE++AVK + + + + E+ L ++H +I+K G C + L +V E
Sbjct: 41 GTGEMVAVKALKADCGPQ--HRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 682 YFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD 741
Y + SL L ++G + + + I + ++Y+H + +HR+++++NVLLD
Sbjct: 99 YVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLLD 151
Query: 742 FENEAHVSDFGIAKFLKPDSSNWTELA----GTYGYVAPELAYTMKVTEKCDVYSFGVLA 797
+ + DFG+AK + P+ + + + APE K DV+SFGV
Sbjct: 152 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 798 LEVI-----KGKHPRDFISSMSFSSLNLNI-ALDEMLD--PRLPTPSRNVHDKLISIVEV 849
E++ P F+ + + + + L E+L+ RLP P + + +
Sbjct: 211 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP----CEVYHL 266
Query: 850 TISCVDENPESRPTMQKVCQLLK 872
+C + RPT + + +LK
Sbjct: 267 MKNCWETEASFRPTFENLIPILK 289
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 32/296 (10%)
Query: 586 LTFEGKIIYEEIIRATNDFDDEHCIGKGGQGS---VYMSKLASGEIIAVKKFHSPLPGEM 642
L F+ YE + R N D IG+ G G+ VY ++ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 643 TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNL 701
++++ E+ L H NIVK+ + +L+I+ E+ ++ AV+L + L
Sbjct: 78 L--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE---LERPL 132
Query: 702 GWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS 761
++ + K +DAL+Y+H++ I+HRD+ + N+L + + ++DFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 189
Query: 762 SNWTELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFISSMSFS 816
GT ++APE+ + K DV+S G+ +E+ + + P ++ M
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM--- 246
Query: 817 SLNLNIALDEMLDPRLPTPSR---NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
+ L IA E P L PSR N D L C+++N ++R T ++ Q
Sbjct: 247 RVLLKIAKSE--PPTLAQPSRWSSNFKDFL-------KKCLEKNVDARWTTSQLLQ 293
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 32/296 (10%)
Query: 586 LTFEGKIIYEEIIRATNDFDDEHCIGKGGQGS---VYMSKLASGEIIAVKKFHSPLPGEM 642
L F+ YE + R N D IG+ G G+ VY ++ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 643 TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNL 701
++++ E+ L H NIVK+ + +L+I+ E+ ++ AV+L + L
Sbjct: 78 L--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE---LERPL 132
Query: 702 GWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS 761
++ + K +DAL+Y+H++ I+HRD+ + N+L + + ++DFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 762 SNWTELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFISSMSFS 816
GT ++APE+ + K DV+S G+ +E+ + + P ++ M
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM--- 246
Query: 817 SLNLNIALDEMLDPRLPTPSR---NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
+ L IA E P L PSR N D L C+++N ++R T ++ Q
Sbjct: 247 RVLLKIAKSE--PPTLAQPSRWSSNFKDFL-------KKCLEKNVDARWTTSQLLQ 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 32/296 (10%)
Query: 586 LTFEGKIIYEEIIRATNDFDDEHCIGKGGQGS---VYMSKLASGEIIAVKKFHSPLPGEM 642
L F+ YE + R N D IG+ G G+ VY ++ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 643 TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNL 701
++++ E+ L H NIVK+ + +L+I+ E+ ++ AV+L + L
Sbjct: 78 L--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE---LERPL 132
Query: 702 GWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS 761
++ + K +DAL+Y+H++ I+HRD+ + N+L + + ++DFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 762 SNWTELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFISSMSFS 816
GT ++APE+ + K DV+S G+ +E+ + + P ++ M
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM--- 246
Query: 817 SLNLNIALDEMLDPRLPTPSR---NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
+ L IA E P L PSR N D L C+++N ++R T ++ Q
Sbjct: 247 RVLLKIAKSE--PPTLAQPSRWSSNFKDFL-------KKCLEKNVDARWTTSQLLQ 293
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 44/282 (15%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G+G G V + +G I+A+KKF +M ++ + E+K L ++ H N+V +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV-KKIAMREIKLLKQLRHENLVNLLE 91
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN-DAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
C + ++V+E+ IL + + L + + I++ + + H+
Sbjct: 92 VCKKKKRWYLVFEFVD----HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---N 144
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTE 786
I+HRDI +N+L+ + DFG A+ L + + T Y APEL +K +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGK 204
Query: 787 KCDVYSFGVLALEVIKG-------------------------KHPRDFISSMSFSSLNL- 820
DV++ G L E+ G +H F + F+ + L
Sbjct: 205 AVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLP 264
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
I E L+ R P S ++++ C+ +P+ RP
Sbjct: 265 EIKEREPLERRYPKLSE-------VVIDLAKKCLHIDPDKRP 299
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 647 EFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
EF++E + + H ++V++ G CL + C L + + N+G
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEH---KDNIGSQLL 142
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+N I + Y+ +VHRD++++NVL+ N ++DFG+A+ L+ D +
Sbjct: 143 LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
Query: 767 LAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIA 823
G ++A E + K T + DV+S+GV E++ G P D I + L
Sbjct: 200 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL----- 254
Query: 824 LDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
L++ RLP P I + V + C + +SRP +++
Sbjct: 255 LEK--GERLPQPPICT----IDVYMVMVKCWMIDADSRPKFKEL 292
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 20/225 (8%)
Query: 647 EFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
EF++E + + H ++V++ G CL + C L + + N+G
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEH---KDNIGSQLL 119
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+N I + Y+ +VHRD++++NVL+ N ++DFG+A+ L+ D +
Sbjct: 120 LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
Query: 767 LAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIA 823
G ++A E + K T + DV+S+GV E++ G P D I + L
Sbjct: 177 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL----- 231
Query: 824 LDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVC 868
L++ RLP P I + V + C + +SRP +++
Sbjct: 232 LEK--GERLPQPPICT----IDVYMVMVKCWMIDADSRPKFKELA 270
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKGG + +S + E+ A K L + +++ E+ + H+++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
F +F+V E +C +L K L ++ IV Y+H + +
Sbjct: 85 FFEDNDFVFVVLE---LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+ L+ + E + DFG+A ++ D L GT Y+APE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 789 DVYSFGVLALEVIKGKHP 806
DV+S G + ++ GK P
Sbjct: 199 DVWSIGCIMYTLLVGKPP 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKGG + +S + E+ A K L + +++ E+ + H+++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
F +F+V E +C +L K L ++ IV Y+H + +
Sbjct: 85 FFEDNDFVFVVLE---LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+ L+ + E + DFG+A ++ D L GT Y+APE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 789 DVYSFGVLALEVIKGKHP 806
DV+S G + ++ GK P
Sbjct: 199 DVWSIGCIMYTLLVGKPP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKGG + +S + E+ A K L + +++ E+ + H+++V +G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
F +F+V E +C +L K L ++ IV Y+H + +
Sbjct: 89 FFEDNDFVFVVLE---LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 142
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+ L+ + E + DFG+A ++ D L GT Y+APE+ + +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 202
Query: 789 DVYSFGVLALEVIKGKHP 806
DV+S G + ++ GK P
Sbjct: 203 DVWSIGCIMYTLLVGKPP 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 30/264 (11%)
Query: 624 ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV--RHLFIVYE 681
+GE++AVK ++ + + E++ L ++H +IVK G C + + +V E
Sbjct: 36 GTGEMVAVKALKEGCGPQL--RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 93
Query: 682 YFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD 741
Y + SL L +G + + + I + ++Y+H + +HR ++++NVLLD
Sbjct: 94 YVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLD 146
Query: 742 FENEAHVSDFGIAKFLKPDSSNWTELA----GTYGYVAPELAYTMKVTEKCDVYSFGVLA 797
+ + DFG+AK + P+ + + + APE K DV+SFGV
Sbjct: 147 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTL 205
Query: 798 LEVI------KGKHPRDFISSMSFSSLNLNI-ALDEMLD--PRLPTPSRNVHDKLISIVE 848
E++ + H + F + + + + L E+L+ RLP P R I
Sbjct: 206 YELLTYCDSNQSPHTK-FTELIGHTQGQMTVLRLTELLERGERLPRPDRCP----CEIYH 260
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ +C + RPT Q + +L+
Sbjct: 261 LMKNCWETEASFRPTFQNLVPILQ 284
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVY 667
+GKG G V+ S +GE++AVKK Q+ F E+ LTE+ H NIV +
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 668 GFCL--HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCF 725
+ R +++V++Y + AVI +N L + ++ ++ + Y+H+
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANI-----LEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKF---------------------LKPDSSNW 764
++HRD+ N+LL+ E V+DFG+++ D
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 765 TELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGK 804
T+ T Y APE L + K T+ D++S G + E++ GK
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKGG + +S + E+ A K L + +++ E+ + H+++V +G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
F +F+V E +C +L K L ++ IV Y+H + +
Sbjct: 109 FFEDNDFVFVVLE---LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+ L+ + E + DFG+A ++ D L GT Y+APE+ + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 789 DVYSFGVLALEVIKGKHP 806
DV+S G + ++ GK P
Sbjct: 223 DVWSIGCIMYTLLVGKPP 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKGG + +S + E+ A K L + +++ E+ + H+++V +G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
F +F+V E +C +L K L ++ IV Y+H + +
Sbjct: 107 FFEDNDFVFVVLE---LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+ L+ + E + DFG+A ++ D L GT Y+APE+ + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 789 DVYSFGVLALEVIKGKHP 806
DV+S G + ++ GK P
Sbjct: 221 DVWSIGCIMYTLLVGKPP 238
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 609 CIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
IGKG V +++ + +G+ +AV+ + Q+ F EV+ + + H NIVK++
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLF 79
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ L++V EY S + A + + IV A+ Y H
Sbjct: 80 EVIETEKTLYLVMEY---ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-E 786
IVHRD+ ++N+LLD + ++DFG + + E G+ Y APEL K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 787 KCDVYSFGVLALEVIKGKHPRD 808
+ DV+S GV+ ++ G P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKGG + +S + E+ A K L + +++ E+ + H+++V +G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
F +F+V E +C +L K L ++ IV Y+H + +
Sbjct: 83 FFEDNDFVFVVLE---LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 136
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+ L+ + E + DFG+A ++ D L GT Y+APE+ + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 789 DVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
DV+S G + ++ GK P + L I +E P+ P V LI
Sbjct: 197 DVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQ--- 247
Query: 849 VTISCVDENPESRPTMQKV 867
+ +P +RPT+ ++
Sbjct: 248 ---KMLQTDPTARPTINEL 263
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G VY +K + G I+A+K+ E + E+ L E+ H NIV +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE-GIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRM-NMIKGIVDALSYMHNDCFPPI 728
R L +V+E+ + V+ N ++ + +++G+ A + H I
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV--AHCHQHR-----I 140
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEK 787
+HRD+ +N+L++ + ++DFG+A+ ++T T Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 788 CDVYSFGVLALEVIKGK 804
D++S G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 599 RATNDFDDEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTE 657
R DF+ C+G+GG G V+ +K + A+K+ LP +++ + EVKAL +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAK 59
Query: 658 IWHRNIVKVYGFCLHVR------------HLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
+ H IV+ + L +L+I + + +L ++ + +
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT 765
+++ I +A+ ++H+ ++HRD+ N+ ++ V DFG+ + D T
Sbjct: 120 CLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 766 EL------------AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
L GT Y++PE + + K D++S G++ E++
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 644 FQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGW 703
+ E L E + ++ + IV++ G C +V E ++ L L + K+
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--- 110
Query: 704 TRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN 763
+ ++ + + Y+ F VHRD++++NVLL ++ A +SDFG++K L+ D +
Sbjct: 111 KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENX 167
Query: 764 WTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 168 YK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
+G+G G VY +K + G I+A+K+ E + E+ L E+ H NIV +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE-GIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRM-NMIKGIVDALSYMHNDCFPPI 728
R L +V+E+ + V+ N ++ + +++G+ A + H I
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV--AHCHQHR-----I 140
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEK 787
+HRD+ +N+L++ + ++DFG+A+ ++T T Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 788 CDVYSFGVLALEVIKGK 804
D++S G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 92
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L + +++ + + Y+H I+
Sbjct: 93 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---II 146
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPELAYTMK 783
HRD+ S N+ L + + DFG+A + S W+ +L+G+ ++APE+ ++
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---IR 199
Query: 784 VTEK------CDVYSFGVLALEVIKGKHP 806
+ +K DVY+FG++ E++ G+ P
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NIVK++ H F+V E + + + K+ T +++ +V A+S+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVME---LLNGGELFERIKKKKHFSETEASYIMRKLVSAVSH 121
Query: 720 MHNDCFPPIVHRDISSKNVLLDFEN---EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAP 776
MH+ +VHRD+ +N+L EN E + DFG A+ PD+ T Y AP
Sbjct: 122 MHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 777 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
EL E CD++S GV+ ++ G+ P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 596 EIIRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKA 654
+I DF+ +GKG G V++++ + + A+K + + + E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 655 LTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
L+ W + + FC +LF V EY L + + +R
Sbjct: 72 LSLAWEHPFL-THMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAE 127
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
I+ L ++H+ IV+RD+ N+LLD + ++DFG+ K + E GT
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD 184
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ K D +SFGVL E++ G+ P
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 100
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L + +++ + + Y+H I+
Sbjct: 101 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPELAYTMK 783
HRD+ S N+ L + + DFG+A + S W+ +L+G+ ++APE+ ++
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---IR 207
Query: 784 VTEK------CDVYSFGVLALEVIKGKHP 806
+ +K DVY+FG++ E++ G+ P
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 24/241 (9%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL 688
+AVK + + +F+ EV A+ + HRN++++YG L + +V E + SL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 107
Query: 689 AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHV 748
L LG R + + + + Y+ + F +HRD++++N+LL + +
Sbjct: 108 LDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKI 162
Query: 749 SDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GK 804
DFG+ + L + ++ + + APE T + D + FGV E+ G+
Sbjct: 163 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 805 HPRDFISSMSFSSLNLNIALDEM--LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P + LN + L ++ RLP P D I V + C PE RP
Sbjct: 223 EP--------WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCWAHKPEDRP 270
Query: 863 T 863
T
Sbjct: 271 T 271
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 100
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L + +++ + + Y+H I+
Sbjct: 101 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 730 HRDISSKNVLLDFENEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
HRD+ S N+ L + + DFG+A K S + +L+G+ ++APE+ +++ +K
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 211
Query: 788 ------CDVYSFGVLALEVIKGKHP 806
DVY+FG++ E++ G+ P
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 77
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L + +++ + + Y+H I+
Sbjct: 78 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 730 HRDISSKNVLLDFENEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
HRD+ S N+ L + + DFG+A K S + +L+G+ ++APE+ +++ +K
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 188
Query: 788 ------CDVYSFGVLALEVIKGKHP 806
DVY+FG++ E++ G+ P
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 24/241 (9%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL 688
+AVK + + +F+ EV A+ + HRN++++YG L + +V E + SL
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 101
Query: 689 AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHV 748
L LG R + + + + Y+ + F +HRD++++N+LL + +
Sbjct: 102 LDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKI 156
Query: 749 SDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GK 804
DFG+ + L + ++ + + APE T + D + FGV E+ G+
Sbjct: 157 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 216
Query: 805 HPRDFISSMSFSSLNLNIALDEM--LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P + LN + L ++ RLP P D I V + C PE RP
Sbjct: 217 EP--------WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCWAHKPEDRP 264
Query: 863 T 863
T
Sbjct: 265 T 265
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 37/284 (13%)
Query: 610 IGKGGQGSVYM-----SKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
+G+G G V + + +GE++AVK ++ + + E++ L ++H +IV
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQL--RSGWQREIEILRTLYHEHIV 73
Query: 665 KVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
K G C + + +V EY + SL L +G + + + I + ++Y+H
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHA 129
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTEL-----AGTYGYVAPE 777
+ +HR ++++NVLLD + + DFG+AK + P+ + + + + Y APE
Sbjct: 130 QHY---IHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APE 184
Query: 778 LAYTMKVTEKCDVYSFGVLALEVI------KGKHPRDFISSMSFSSLNLNI-ALDEMLD- 829
K DV+SFGV E++ + H + F + + + + L E+L+
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTK-FTELIGHTQGQMTVLRLTELLER 243
Query: 830 -PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
RLP P R I + +C + RPT Q + +L+
Sbjct: 244 GERLPRPDRCP----CEIYHLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 77
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L + +++ + + Y+H I+
Sbjct: 78 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 730 HRDISSKNVLLDFENEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
HRD+ S N+ L + + DFG+A K S + +L+G+ ++APE+ +++ +K
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 188
Query: 788 ------CDVYSFGVLALEVIKGKHP 806
DVY+FG++ E++ G+ P
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 99
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L + +++ + + Y+H I+
Sbjct: 100 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---II 153
Query: 730 HRDISSKNVLLDFENEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
HRD+ S N+ L + + DFG+A K S + +L+G+ ++APE+ +++ +K
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 210
Query: 788 ------CDVYSFGVLALEVIKGKHP 806
DVY+FG++ E++ G+ P
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 644 FQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGW 703
+ E L E + ++ + IV++ G C +V E ++ L L + K+
Sbjct: 49 LKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--- 104
Query: 704 TRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN 763
+ ++ + + Y+ F VHRD++++NVLL ++ A +SDFG++K L+ D +
Sbjct: 105 KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 161
Query: 764 WTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 162 YK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 644 FQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGW 703
+ E L E + ++ + IV++ G C +V E ++ L L + K+
Sbjct: 51 LKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--- 106
Query: 704 TRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN 763
+ ++ + + Y+ F VHRD++++NVLL ++ A +SDFG++K L+ D +
Sbjct: 107 KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163
Query: 764 WTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 164 YK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 644 FQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGW 703
+ E L E + ++ + IV++ G C +V E ++ L L + K+
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--- 110
Query: 704 TRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN 763
+ ++ + + Y+ F VHRD++++NVLL ++ A +SDFG++K L+ D +
Sbjct: 111 KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 167
Query: 764 WTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 168 YK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 74
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L + +++ + + Y+H I+
Sbjct: 75 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---II 128
Query: 730 HRDISSKNVLLDFENEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
HRD+ S N+ L + + DFG+A K S + +L+G+ ++APE+ +++ +K
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 185
Query: 788 ------CDVYSFGVLALEVIKGKHP 806
DVY+FG++ E++ G+ P
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
L IV ++ + SL L + +++ + + Y+H I+
Sbjct: 73 ST-APQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 730 HRDISSKNVLLDFENEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
HRD+ S N+ L + + DFG+A K S + +L+G+ ++APE+ +++ +K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 183
Query: 788 ------CDVYSFGVLALEVIKGKHP 806
DVY+FG++ E++ G+ P
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L + +++ + + Y+H I+
Sbjct: 73 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPELAYTMK 783
HRD+ S N+ L + + DFG+A + S W+ +L+G+ ++APE+ ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV---IR 179
Query: 784 VTEK------CDVYSFGVLALEVIKGKHP 806
+ +K DVY+FG++ E++ G+ P
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + +P P ++ Q F NEV L + H NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ L IV ++ + SL L + +++ + + Y+H I+
Sbjct: 73 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 730 HRDISSKNVLLDFENEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
HRD+ S N+ L + + DFG+A K S + +L+G+ ++APE+ +++ +K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 183
Query: 788 ------CDVYSFGVLALEVIKGKHP 806
DVY+FG++ E++ G+ P
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V+ + +G+I+A+KKF + ++ L E++ L ++ H N+V +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLES-EDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH-NDCFPP 727
R L +V+EY C V+ D + + ++ + A+++ H ++C
Sbjct: 70 VFRRKRRLHLVFEY---CDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC--- 123
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTE 786
+HRD+ +N+L+ + + DFG A+ L S + + T Y +PEL +
Sbjct: 124 -IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGP 182
Query: 787 KCDVYSFGVLALEVIKG 803
DV++ G + E++ G
Sbjct: 183 PVDVWAIGCVFAELLSG 199
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G G V + K +G A+K + L+EV L ++ H NI+K+Y
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 669 FCLHVRHLFIVYEYFKMCSL--AVILSN-----DAAAKNLGWTRRMNMIKGIVDALSYMH 721
F R+ ++V E ++ L +IL DAA ++K ++ +Y+H
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----------IMKQVLSGTTYLH 138
Query: 722 NDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
IVHRD+ +N+LL+ ++ + DFG++ + E GT Y+APE+
Sbjct: 139 KH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEV 194
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHP 806
K EKCDV+S GV+ ++ G P
Sbjct: 195 -LRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 643 TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLG 702
+ E L E + ++ + IV++ G C +V E ++ L L + K+
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-- 469
Query: 703 WTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS 762
+ ++ + + Y+ F VHRD++++NVLL ++ A +SDFG++K L+ D +
Sbjct: 470 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525
Query: 763 NWTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 526 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHE 65
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 643 TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLG 702
+ E L E + ++ + IV++ G C +V E ++ L L + K+
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-- 468
Query: 703 WTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS 762
+ ++ + + Y+ F VHRD++++NVLL ++ A +SDFG++K L+ D +
Sbjct: 469 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524
Query: 763 NWTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 525 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 604 FDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
F+ + +G G V +++ A+G++ AVK P + NE+ L +I H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCI--PKKALKGKESSIENEIAVLRKIKHEN 81
Query: 663 IVKVYGFCLHVRHLFIVYE-------YFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
IV + HL++V + + ++ DA+ +I+ ++D
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS----------TLIRQVLD 131
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLL---DFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
A+ Y+H IVHRD+ +N+L D E++ +SDFG++K ++ + GT G
Sbjct: 132 AVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPG 187
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YVAPE+ ++ D +S GV+A ++ G P
Sbjct: 188 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 609 CIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
IGKG V +++ + +G+ +AVK + Q+ F EV+ + + H NIVK++
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLF 79
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ L++V EY S + A + + IV A+ Y H
Sbjct: 80 EVIETEKTLYLVMEY---ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-E 786
IVHRD+ ++N+LLD + ++DFG + + G+ Y APEL K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 787 KCDVYSFGVLALEVIKGKHPRD 808
+ DV+S GV+ ++ G P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 609 CIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
IGKG V +++ + +G+ +AVK + Q+ F EV+ + + H NIVK++
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLF 79
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ L++V EY S + A + + IV A+ Y H
Sbjct: 80 EVIETEKTLYLVMEY---ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-E 786
IVHRD+ ++N+LLD + ++DFG + + G+ Y APEL K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 787 KCDVYSFGVLALEVIKGKHPRD 808
+ DV+S GV+ ++ G P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 184/434 (42%), Gaps = 114/434 (26%)
Query: 6 NNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEI 65
NN L D P L+NL L D+ + NN+++ P L NLTNL L + N ++ P +
Sbjct: 72 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 125
Query: 66 GNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXX 125
N + LELS+N +S +L L++L L +N +++ P
Sbjct: 126 KNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--------------- 168
Query: 126 XXXXXXXXPHSLGNLTNLATLYIYSNSLS-ASILGKIGNLKSLSNLQLSENNFNGSIPPS 184
L NLT L L I SN +S S+L K+ NL+SL ++ NN I P
Sbjct: 169 -----------LANLTTLERLDISSNKVSDISVLAKLTNLESL----IATNNQISDITP- 212
Query: 185 LGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTYLNL 244
LG L+NL L L+ N L K G ++ +L+NLT L+L
Sbjct: 213 LGILTNLDELSLNGNQL----------------------KDIG----TLASLTNLTDLDL 246
Query: 245 FENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESF 304
N +S P L KLT L LG NQ P L LT+L + L+ N L +IS
Sbjct: 247 ANNQISNLAPLS--GLTKLTELKLGANQISNISP-LAGLTALTNLELNENQL-EDISP-I 301
Query: 305 YIYPNLTYIDLSQNNFYGEIS--SDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLD 362
NLTY+ L ++ IS S KL L FS N ++ D
Sbjct: 302 SNLKNLTYLTL----YFNNISDISPVSSLTKLQRLFFSNNKVS----------------D 341
Query: 363 LSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSN---- 418
+SS L L L HNQ+S L+P L +L ++ L L+ +N
Sbjct: 342 VSS----------LANLTNINWLSAGHNQIS-DLTP-LANLTRITQLGLNDQAWTNAPVN 389
Query: 419 -----SIPKSLGNL 427
SIP ++ N+
Sbjct: 390 YKANVSIPNTVKNV 403
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 130/287 (45%), Gaps = 41/287 (14%)
Query: 236 LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNY 295
L+NLT +N N L+ P +NL KL +L+ +NQ P L NLT+L + L N
Sbjct: 62 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQ 118
Query: 296 LTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHS 355
+T + NL ++LS N +IS+ G L L FS N +T P + +
Sbjct: 119 ITD--IDPLKNLTNLNRLELSSNTI-SDISALSGLT-SLQQLSFSSNQVTDLKP--LANL 172
Query: 356 SQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSP----------------- 398
+ L LD+SSN V +I + L KL L+ +NQ+S ++P
Sbjct: 173 TTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQIS-DITPLGILTNLDELSLNGNQL 229
Query: 399 ----KLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQ 454
L SL L LDL++N++SN P S L L+EL L N + P + +
Sbjct: 230 KDIGTLASLTNLTDLDLANNQISNLAPLS----GLTKLTELKLGANQISNISP--LAGLT 283
Query: 455 SLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFK 501
+L L L+ N L + P + L ++ + +N + P S+ K
Sbjct: 284 ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 328
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 120/256 (46%), Gaps = 34/256 (13%)
Query: 233 MGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLD 292
+ NL+NLT L LF N ++ P +NL L L L N I L LTSL+++
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-ISALSGLTSLQQLSFS 159
Query: 293 RNYLTGNISESFYIYPNLTY---IDLSQNNFYGEISSDWGRCPKLSTLD--FSINNITGN 347
N +T NLT +D+S N SD KL+ L+ + NN +
Sbjct: 160 SNQVT-----DLKPLANLTTLERLDISSNKV-----SDISVLAKLTNLESLIATNNQISD 209
Query: 348 VPPEIGHSSQLGVLDLSSNHI--VGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQ 405
+ P +G + L L L+ N + +G L L L LA+NQ+S L+P L L +
Sbjct: 210 ITP-LGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLANNQISN-LAP-LSGLTK 262
Query: 406 LEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNS 465
L L L +N++SN P + L L+ L+L+ N L + P I +++L L L N+
Sbjct: 263 LTELKLGANQISNISPLA----GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 316
Query: 466 LSGLIP-SCFEKMNGL 480
+S + P S K+ L
Sbjct: 317 ISDISPVSSLTKLQRL 332
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 132/316 (41%), Gaps = 65/316 (20%)
Query: 3 CIYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIP 62
++NN + D P L+NL +L+ LEL +N +S +L LT+L L +N ++ P
Sbjct: 113 TLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP 168
Query: 63 GEIGNFRFFSDLELSNNKLSG-SIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXX 121
+ N L++S+NK+S S+ L L+NL +L N +S+ P
Sbjct: 169 --LANLTTLERLDISSNKVSDISV---LAKLTNLESLIATNNQISDITP----------- 212
Query: 122 XXXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSI 181
LG LTNL L + N L +G + +L +L++L L+ N +
Sbjct: 213 ---------------LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA 255
Query: 182 PPSLGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTY 241
P L L+ L L L N +S P N+L PIS NL NLTY
Sbjct: 256 P--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNE--NQLEDISPIS--NLKNLTY 309
Query: 242 LNLFENSLSGAIPY--------------------EYRNLVKLTILLLGHNQFRGPIPILR 281
L L+ N++S P NL + L GHNQ P L
Sbjct: 310 LTLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNINWLSAGHNQISDLTP-LA 368
Query: 282 NLTSLERVRLDRNYLT 297
NLT + ++ L+ T
Sbjct: 369 NLTRITQLGLNDQAWT 384
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 24/241 (9%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL 688
+AVK + + +F+ EV A+ + HRN++++YG L + +V E + SL
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 101
Query: 689 AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHV 748
L LG R + + + + Y+ + F +HRD++++N+LL + +
Sbjct: 102 LDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKI 156
Query: 749 SDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GK 804
DFG+ + L + ++ + + APE T + D + FGV E+ G+
Sbjct: 157 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 216
Query: 805 HPRDFISSMSFSSLNLNIALDEM--LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P + LN + L ++ RLP P D I V + C PE RP
Sbjct: 217 EP--------WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCWAHKPEDRP 264
Query: 863 T 863
T
Sbjct: 265 T 265
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 24/241 (9%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL 688
+AVK + + +F+ EV A+ + HRN++++YG L + +V E + SL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 97
Query: 689 AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHV 748
L LG R + + + + Y+ + F +HRD++++N+LL + +
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKI 152
Query: 749 SDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GK 804
DFG+ + L + ++ + + APE T + D + FGV E+ G+
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 805 HPRDFISSMSFSSLNLNIALDEM--LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P + LN + L ++ RLP P D I V + C PE RP
Sbjct: 213 EP--------WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCWAHKPEDRP 260
Query: 863 T 863
T
Sbjct: 261 T 261
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 24/241 (9%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL 688
+AVK + + +F+ EV A+ + HRN++++YG L + +V E + SL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 97
Query: 689 AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHV 748
L LG R + + + + Y+ + F +HRD++++N+LL + +
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKI 152
Query: 749 SDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GK 804
DFG+ + L + ++ + + APE T + D + FGV E+ G+
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 805 HPRDFISSMSFSSLNLNIALDEM--LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P + LN + L ++ RLP P D I V + C PE RP
Sbjct: 213 EP--------WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCWAHKPEDRP 260
Query: 863 T 863
T
Sbjct: 261 T 261
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 601 TNDFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
D+D +G+G G V ++ + E +AVK + + + E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 63
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H N+VK YG H R I Y + + CS + + ++ + Y
Sbjct: 64 HENVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPE 777
+H I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 778 LAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
L + E DV+S G++ ++ G+ P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 601 TNDFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
D+D +G+G G V ++ + E +AVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 62
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H N+VK YG H R I Y + + CS + + ++ + Y
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPE 777
+H I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 778 LAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
L + E DV+S G++ ++ G+ P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 609 CIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
IGKG V +++ + +G+ +AVK + Q+ F EV+ + + H NIVK++
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLF 79
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ L++V EY S + A + + IV A+ Y H
Sbjct: 80 EVIETEKTLYLVMEY---ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-E 786
IVHRD+ ++N+LLD + ++DFG + + G Y APEL K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 787 KCDVYSFGVLALEVIKGKHPRD 808
+ DV+S GV+ ++ G P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINAMLNHE 65
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 141/316 (44%), Gaps = 71/316 (22%)
Query: 6 NNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEI 65
NN L D P L+NL L D+ + NN+++ P L NLTNL L + N ++ P +
Sbjct: 72 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 125
Query: 66 GNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXX 125
N + LELS+N +S +L L++L L +N +++ P
Sbjct: 126 KNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--------------- 168
Query: 126 XXXXXXXXPHSLGNLTNLATLYIYSNSLS-ASILGKIGNLKSLSNLQLSENNFNGSIPPS 184
L NLT L L I SN +S S+L K+ NL+SL ++ NN I P
Sbjct: 169 -----------LANLTTLERLDISSNKVSDISVLAKLTNLESL----IATNNQISDITP- 212
Query: 185 LGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTYLNL 244
LG L+NL L L+ N L K G ++ +L+NLT L+L
Sbjct: 213 LGILTNLDELSLNGNQL----------------------KDIG----TLASLTNLTDLDL 246
Query: 245 FENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESF 304
N +S P L KLT L LG NQ P L LT+L + L+ N L +IS
Sbjct: 247 ANNQISNLAPLS--GLTKLTELKLGANQISNISP-LAGLTALTNLELNENQL-EDISP-I 301
Query: 305 YIYPNLTYIDLSQNNF 320
NLTY+ L NN
Sbjct: 302 SNLKNLTYLTLYFNNI 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 130/287 (45%), Gaps = 41/287 (14%)
Query: 236 LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNY 295
L+NLT +N N L+ P +NL KL +L+ +NQ P L NLT+L + L N
Sbjct: 62 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQ 118
Query: 296 LTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHS 355
+T + NL ++LS N +IS+ G L L FS N +T P + +
Sbjct: 119 ITD--IDPLKNLTNLNRLELSSNTI-SDISALSG-LTSLQQLSFSSNQVTDLKP--LANL 172
Query: 356 SQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSP----------------- 398
+ L LD+SSN V +I + L KL L+ +NQ+S ++P
Sbjct: 173 TTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQIS-DITPLGILTNLDELSLNGNQL 229
Query: 399 ----KLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQ 454
L SL L LDL++N++SN P S L L+EL L N + P + +
Sbjct: 230 KDIGTLASLTNLTDLDLANNQISNLAPLS----GLTKLTELKLGANQISNISP--LAGLT 283
Query: 455 SLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFK 501
+L L L+ N L + P + L ++ + +N + P S+ K
Sbjct: 284 ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 328
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 120/256 (46%), Gaps = 34/256 (13%)
Query: 233 MGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLD 292
+ NL+NLT L LF N ++ P +NL L L L N I L LTSL+++
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-ISALSGLTSLQQLSFS 159
Query: 293 RNYLTGNISESFYIYPNLTY---IDLSQNNFYGEISSDWGRCPKLSTLD--FSINNITGN 347
N +T NLT +D+S N SD KL+ L+ + NN +
Sbjct: 160 SNQVT-----DLKPLANLTTLERLDISSNKV-----SDISVLAKLTNLESLIATNNQISD 209
Query: 348 VPPEIGHSSQLGVLDLSSNHI--VGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQ 405
+ P +G + L L L+ N + +G L L L LA+NQ+S L+P L L +
Sbjct: 210 ITP-LGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLANNQISN-LAP-LSGLTK 262
Query: 406 LEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNS 465
L L L +N++SN P + L L+ L+L+ N L + P I +++L L L N+
Sbjct: 263 LTELKLGANQISNISPLA----GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 316
Query: 466 LSGLIP-SCFEKMNGL 480
+S + P S K+ L
Sbjct: 317 ISDISPVSSLTKLQRL 332
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 132/316 (41%), Gaps = 65/316 (20%)
Query: 3 CIYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIP 62
++NN + D P L+NL +L+ LEL +N +S +L LT+L L +N ++ P
Sbjct: 113 TLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP 168
Query: 63 GEIGNFRFFSDLELSNNKLSG-SIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXX 121
+ N L++S+NK+S S+ L L+NL +L N +S+ P
Sbjct: 169 --LANLTTLERLDISSNKVSDISV---LAKLTNLESLIATNNQISDITP----------- 212
Query: 122 XXXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSI 181
LG LTNL L + N L +G + +L +L++L L+ N +
Sbjct: 213 ---------------LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA 255
Query: 182 PPSLGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTY 241
P L L+ L L L N +S P N+L PIS NL NLTY
Sbjct: 256 P--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNE--NQLEDISPIS--NLKNLTY 309
Query: 242 LNLFENSLSGAIPY--------------------EYRNLVKLTILLLGHNQFRGPIPILR 281
L L+ N++S P NL + L GHNQ P L
Sbjct: 310 LTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP-LA 368
Query: 282 NLTSLERVRLDRNYLT 297
NLT + ++ L+ T
Sbjct: 369 NLTRITQLGLNDQAWT 384
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 121/277 (43%), Gaps = 40/277 (14%)
Query: 602 NDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+DF+ +G G G V+ +S SG ++A K H L + + + + E++ L E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 66
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDAL 717
IV YG + I E+ SL D K G + K ++ L
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKKAGRIPEQILGKVSIAVIKGL 120
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+Y+ I+HRD+ N+L++ E + DFG++ L + +N E GT Y++PE
Sbjct: 121 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPE 176
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLD-------P 830
+ + D++S G+ +E+ G++PR +A+ E+LD P
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPRP------------PMAIFELLDYIVNEPPP 224
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
+LP+ + + + C+ +NP R ++++
Sbjct: 225 KLPSAVFS-----LEFQDFVNKCLIKNPAERADLKQL 256
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 63
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 64 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 121 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 141/316 (44%), Gaps = 71/316 (22%)
Query: 6 NNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEI 65
NN L D P L+NL L D+ + NN+++ P L NLTNL L + N ++ P +
Sbjct: 72 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 125
Query: 66 GNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXX 125
N + LELS+N +S +L L++L L +N +++ P
Sbjct: 126 KNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDLKP--------------- 168
Query: 126 XXXXXXXXPHSLGNLTNLATLYIYSNSLS-ASILGKIGNLKSLSNLQLSENNFNGSIPPS 184
L NLT L L I SN +S S+L K+ NL+SL ++ NN I P
Sbjct: 169 -----------LANLTTLERLDISSNKVSDISVLAKLTNLESL----IATNNQISDITP- 212
Query: 185 LGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTYLNL 244
LG L+NL L L+ N L K G ++ +L+NLT L+L
Sbjct: 213 LGILTNLDELSLNGNQL----------------------KDIG----TLASLTNLTDLDL 246
Query: 245 FENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESF 304
N +S P L KLT L LG NQ P L LT+L + L+ N L +IS
Sbjct: 247 ANNQISNLAPLS--GLTKLTELKLGANQISNISP-LAGLTALTNLELNENQL-EDISP-I 301
Query: 305 YIYPNLTYIDLSQNNF 320
NLTY+ L NN
Sbjct: 302 SNLKNLTYLTLYFNNI 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 131/287 (45%), Gaps = 41/287 (14%)
Query: 236 LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNY 295
L+NLT +N N L+ P +NL KL +L+ +NQ P L NLT+L + L N
Sbjct: 62 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQ 118
Query: 296 LTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHS 355
+T + NL ++LS N +IS+ G L L+FS N +T P + +
Sbjct: 119 ITD--IDPLKNLTNLNRLELSSNTI-SDISALSG-LTSLQQLNFSSNQVTDLKP--LANL 172
Query: 356 SQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSP----------------- 398
+ L LD+SSN V +I + L KL L+ +NQ+S ++P
Sbjct: 173 TTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQIS-DITPLGILTNLDELSLNGNQL 229
Query: 399 ----KLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQ 454
L SL L LDL++N++SN P S L L+EL L N + P + +
Sbjct: 230 KDIGTLASLTNLTDLDLANNQISNLAPLS----GLTKLTELKLGANQISNISP--LAGLT 283
Query: 455 SLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFK 501
+L L L+ N L + P + L ++ + +N + P S+ K
Sbjct: 284 ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 328
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 120/256 (46%), Gaps = 34/256 (13%)
Query: 233 MGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLD 292
+ NL+NLT L LF N ++ P +NL L L L N I L LTSL+++
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-ISALSGLTSLQQLNFS 159
Query: 293 RNYLTGNISESFYIYPNLTY---IDLSQNNFYGEISSDWGRCPKLSTLD--FSINNITGN 347
N +T NLT +D+S N SD KL+ L+ + NN +
Sbjct: 160 SNQVT-----DLKPLANLTTLERLDISSNKV-----SDISVLAKLTNLESLIATNNQISD 209
Query: 348 VPPEIGHSSQLGVLDLSSNHI--VGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQ 405
+ P +G + L L L+ N + +G L L L LA+NQ+S L+P L L +
Sbjct: 210 ITP-LGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLANNQISN-LAP-LSGLTK 262
Query: 406 LEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNS 465
L L L +N++SN P + L L+ L+L+ N L + P I +++L L L N+
Sbjct: 263 LTELKLGANQISNISPLA----GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 316
Query: 466 LSGLIP-SCFEKMNGL 480
+S + P S K+ L
Sbjct: 317 ISDISPVSSLTKLQRL 332
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 132/316 (41%), Gaps = 65/316 (20%)
Query: 3 CIYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIP 62
++NN + D P L+NL +L+ LEL +N +S +L LT+L L +N ++ P
Sbjct: 113 TLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDLKP 168
Query: 63 GEIGNFRFFSDLELSNNKLSG-SIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXX 121
+ N L++S+NK+S S+ L L+NL +L N +S+ P
Sbjct: 169 --LANLTTLERLDISSNKVSDISV---LAKLTNLESLIATNNQISDITP----------- 212
Query: 122 XXXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSI 181
LG LTNL L + N L +G + +L +L++L L+ N +
Sbjct: 213 ---------------LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA 255
Query: 182 PPSLGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTY 241
P L L+ L L L N +S P N+L PIS NL NLTY
Sbjct: 256 P--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNE--NQLEDISPIS--NLKNLTY 309
Query: 242 LNLFENSLSGAIPY--------------------EYRNLVKLTILLLGHNQFRGPIPILR 281
L L+ N++S P NL + L GHNQ P L
Sbjct: 310 LTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP-LA 368
Query: 282 NLTSLERVRLDRNYLT 297
NLT + ++ L+ T
Sbjct: 369 NLTRITQLGLNDQAWT 384
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 601 TNDFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
D+D +G+G G V ++ + E +AVK + + + E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 63
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H N+VK YG H R I Y + + CS + + ++ + Y
Sbjct: 64 HENVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPE 777
+H I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 778 LAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
L + E DV+S G++ ++ G+ P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 601 TNDFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW 659
D+D +G+G G V ++ + E +AVK + + + E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 63
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H N+VK YG H R I Y + + CS + + ++ + Y
Sbjct: 64 HENVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPE 777
+H I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 778 LAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
L + E DV+S G++ ++ G+ P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
NDFD +GKG G V + + A+G A+K + + E + L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 661 RNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG--IVDAL 717
+ + Y F H R F++ EY L LS + +T G IV AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 118
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
Y+H+ +V+RDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
+ D + GV+ E++ G+ P + L I ++E+ PR +P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPE 231
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 124/285 (43%), Gaps = 37/285 (12%)
Query: 596 EIIRATNDFDDEHCIGKGGQGSVYMS------KLASGEIIAVKKFHSPLPGEMTFQQEFL 649
E IR DF D +G G V ++ KL + + IA K G M
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK-EGSME------ 64
Query: 650 NEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR--M 707
NE+ L +I H NIV + HL+++ + L D + +T R
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDAS 119
Query: 708 NMIKGIVDALSYMHNDCFPPIVHRDISSKNVL---LDFENEAHVSDFGIAKFLKPDSSNW 764
+I ++DA+ Y+H+ IVHRD+ +N+L LD +++ +SDFG++K P S
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVL 175
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIAL 824
+ GT GYVAPE+ ++ D +S GV+A ++ G P F N
Sbjct: 176 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--------FYDENDAKLF 227
Query: 825 DEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
+++L S D S + ++++PE R T ++ Q
Sbjct: 228 EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 603 DFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
D+D +G+G G V ++ + E +AVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+VK YG H R I Y + + CS + + ++ + Y+H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELA 779
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 780 YTMKV-TEKCDVYSFGVLALEVIKGKHPRD 808
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 609 CIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
IGKG V +++ + +G+ +AV+ + Q+ F EV+ + + H NIVK++
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLF 79
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ L++V EY S + A + + IV A+ Y H
Sbjct: 80 EVIETEKTLYLVMEY---ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-E 786
IVHRD+ ++N+LLD + ++DFG + + G+ Y APEL K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 787 KCDVYSFGVLALEVIKGKHPRD 808
+ DV+S GV+ ++ G P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
NDFD +GKG G V + + A+G A+K + + E + L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 661 RNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG--IVDAL 717
+ + Y F H R F++ EY L LS + +T G IV AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 118
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
Y+H+ +V+RDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
+ D + GV+ E++ G+ P + L I ++E+ PR +P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPE 231
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 25/170 (14%)
Query: 647 EFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN-------DAAAK 699
+ L EV L + H NI+K+Y F R+ ++V E +K L + + DAA
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV- 140
Query: 700 NLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD-FENEA--HVSDFGIAKF 756
+IK ++ ++Y+H IVHRD+ +N+LL+ E +A + DFG++
Sbjct: 141 ---------IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188
Query: 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + E GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 189 FE-NQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 609 CIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
IGKG V +++ + +G +A+K + Q+ F EV+ + + H NIVK++
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLF 77
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ L+++ EY S + A + + + IV A+ Y H
Sbjct: 78 EVIETEKTLYLIMEY---ASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KR 131
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-E 786
IVHRD+ ++N+LLD + ++DFG + G+ Y APEL K
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 787 KCDVYSFGVLALEVIKGKHPRD 808
+ DV+S GV+ ++ G P D
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFD 212
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 10/204 (4%)
Query: 607 EHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVK 665
+ IGKG V +++ + +G +AVK + Q+ F EV+ + + H NIVK
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVK 78
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCF 725
++ + L++V EY S + A + + IV A+ Y H
Sbjct: 79 LFEVIETEKTLYLVMEY---ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY- 134
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 785
IVHRD+ ++N+LLD + ++DFG + + G+ Y APEL K
Sbjct: 135 --IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGSPPYAAPELFQGKKYD 191
Query: 786 -EKCDVYSFGVLALEVIKGKHPRD 808
+ DV+S GV+ ++ G P D
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
NDFD +GKG G V + + A+G A+K + + E + L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 661 RNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG--IVDAL 717
+ + Y F H R F++ EY L LS + +T G IV AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 118
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
Y+H+ +V+RDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
+ D + GV+ E++ G+ P + L I ++E+ PR +P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPE 231
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 24/241 (9%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL 688
+AVK + + +F+ EV A+ + HRN++++YG L + +V E + SL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 107
Query: 689 AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHV 748
L LG R + + + + Y+ + F +HRD++++N+LL + +
Sbjct: 108 LDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKI 162
Query: 749 SDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GK 804
DFG+ + L + + + + APE T + D + FGV E+ G+
Sbjct: 163 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 805 HPRDFISSMSFSSLNLNIALDEM--LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P + LN + L ++ RLP P D I V + C PE RP
Sbjct: 223 EP--------WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCWAHKPEDRP 270
Query: 863 T 863
T
Sbjct: 271 T 271
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 609 CIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
IGKG V +++ + +G+ +AVK + Q+ F EV+ + + H NIVK++
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLF 72
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNM---IKGIVDALSYMHNDC 724
+ L++V EY S + A GW + + IV A+ Y H
Sbjct: 73 EVIETEKTLYLVMEY---ASGGEVFDYLVAH---GWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
IVHRD+ ++N+LLD + ++DFG + + G+ Y APEL K
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKY 182
Query: 785 T-EKCDVYSFGVLALEVIKGKHPRD 808
+ DV+S GV+ ++ G P D
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 29/281 (10%)
Query: 596 EIIRATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKF-HSPLPGEMTFQQEFLNEVK 653
E IR DF D +G G V +++ + +++A+K L G+ + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK---EGSMENEIA 68
Query: 654 ALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR--MNMIK 711
L +I H NIV + HL+++ + L D + +T R +I
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIF 123
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVL---LDFENEAHVSDFGIAKFLKPDSSNWTELA 768
++DA+ Y+H+ IVHRD+ +N+L LD +++ +SDFG++K P S +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTAC 179
Query: 769 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEML 828
GT GYVAPE+ ++ D +S GV+A ++ G P F N +++L
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--------FYDENDAKLFEQIL 231
Query: 829 DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
S D S + ++++PE R T ++ Q
Sbjct: 232 KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 130/303 (42%), Gaps = 35/303 (11%)
Query: 578 NSRGLLSVLTFEGKIIYEEIIR--ATNDFDDEHCIGKGGQGSVYMS-KLASGE------- 627
R L+ LT G+ + ++R +F +G G G+VY + GE
Sbjct: 23 QERELVEPLTPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 82
Query: 628 IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCS 687
I+ +++ SP +E L+E + + + ++ ++ G CL I C
Sbjct: 83 IMELREATSP-----KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 137
Query: 688 LAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAH 747
L + + N+G +N I ++Y+ + +VHRD++++NVL+
Sbjct: 138 LDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 191
Query: 748 VSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GK 804
++DFG+AK L + + G ++A E T + DV+S+GV E++ G
Sbjct: 192 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 251
Query: 805 HPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTM 864
P D I + SS+ L++ RLP P I + + + C + +SRP
Sbjct: 252 KPYDGIPASEISSI-----LEK--GERLPQPPICT----IDVYMIMVKCWMIDADSRPKF 300
Query: 865 QKV 867
+++
Sbjct: 301 REL 303
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
NDFD +GKG G V + + A+G A+K + + E + L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 661 RNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG--IVDAL 717
+ + Y F H R F++ EY L LS + +T G IV AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 118
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
Y+H+ +V+RDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
+ D + GV+ E++ G+ P + L I ++E+ PR +P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPE 231
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 124/282 (43%), Gaps = 42/282 (14%)
Query: 611 GKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFC 670
+G G V+ ++L + E +AVK F P+ + ++Q E+ EV +L + H NI++ G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIF--PIQDKQSWQNEY--EVYSLPGMKHENILQFIG-- 85
Query: 671 LHVR------HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
R L+++ + + SL+ L A + W ++ + + L+Y+H D
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLK----ANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 725 -------FPPIVHRDISSKNVLLDFENEAHVSDFGIA-KFLKPDSSNWTE-LAGTYGYVA 775
P I HRDI SKNVLL A ++DFG+A KF S+ T GT Y+A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 776 PE-----LAYTMKVTEKCDVYSFGV----LALEVIKGKHPRDFISSMSFSSLNLNIALDE 826
PE + + + D+Y+ G+ LA P D + + +L++
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLED 261
Query: 827 MLDPRLPTPSRNV-------HDKLISIVEVTISCVDENPESR 861
M + + R V H + + E C D + E+R
Sbjct: 262 MQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEAR 303
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F V +L +V +Y V A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
NDFD +GKG G V + + A+G A+K + + E + L H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 661 RNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG--IVDAL 717
+ + Y F H R F++ EY L LS + +T G IV AL
Sbjct: 68 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 121
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
Y+H+ +V+RDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 122 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
+ D + GV+ E++ G+ P + L I ++E+ PR +P
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPE 234
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IGKG V +++ + +G +A+K + Q+ F EV+ + + H NIVK++
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFE 81
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ L+++ EY S + A + + + IV A+ Y H I
Sbjct: 82 VIETEKTLYLIMEY---ASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KRI 135
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EK 787
VHRD+ ++N+LLD + ++DFG + G Y APEL K +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 788 CDVYSFGVLALEVIKGKHPRD 808
DV+S GV+ ++ G P D
Sbjct: 195 VDVWSLGVILYTLVSGSLPFD 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 643 TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLG 702
+ E L E + ++ + IV++ G C +V E ++ L L + K+
Sbjct: 68 ALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-- 124
Query: 703 WTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS 762
+ ++ + + Y+ F VHRD++++NVLL ++ A +SDFG++K L+ D +
Sbjct: 125 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 180
Query: 763 NWTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 181 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 118 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 26/198 (13%)
Query: 610 IGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G G V + K +G A+K + L+EV L ++ H NI+K+Y
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 669 FCLHVRHLFIVYEYFKMCSL--AVILSN-----DAAAKNLGWTRRMNMIKGIVDALSYMH 721
F R+ ++V E ++ L +IL DAA ++K ++ +Y+H
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----------IMKQVLSGTTYLH 121
Query: 722 NDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
IVHRD+ +N+LL+ ++ + DFG++ + E GT Y+APE+
Sbjct: 122 K---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEV 177
Query: 779 AYTMKVTEKCDVYSFGVL 796
K EKCDV+S GV+
Sbjct: 178 -LRKKYDEKCDVWSCGVI 194
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 117 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 643 TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLG 702
+ E L E + ++ + IV++ G C +V E ++ L L + K+
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-- 116
Query: 703 WTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS 762
+ ++ + + Y+ F VHRD++++NVLL ++ A +SDFG++K L+ D +
Sbjct: 117 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172
Query: 763 NWTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 173 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 29/281 (10%)
Query: 596 EIIRATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKF-HSPLPGEMTFQQEFLNEVK 653
E IR DF D +G G V +++ + +++A+K L G+ + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK---EGSMENEIA 68
Query: 654 ALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR--MNMIK 711
L +I H NIV + HL+++ + L D + +T R +I
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIF 123
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVL---LDFENEAHVSDFGIAKFLKPDSSNWTELA 768
++DA+ Y+H+ IVHRD+ +N+L LD +++ +SDFG++K P S +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTAC 179
Query: 769 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEML 828
GT GYVAPE+ ++ D +S GV+A ++ G P F N +++L
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--------FYDENDAKLFEQIL 231
Query: 829 DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
S D S + ++++PE R T ++ Q
Sbjct: 232 KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 119 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 116 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 29/281 (10%)
Query: 596 EIIRATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKF-HSPLPGEMTFQQEFLNEVK 653
E IR DF D +G G V +++ + +++A+K L G+ + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK---EGSMENEIA 68
Query: 654 ALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR--MNMIK 711
L +I H NIV + HL+++ + L D + +T R +I
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIF 123
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVL---LDFENEAHVSDFGIAKFLKPDSSNWTELA 768
++DA+ Y+H+ IVHRD+ +N+L LD +++ +SDFG++K P S +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTAC 179
Query: 769 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEML 828
GT GYVAPE+ ++ D +S GV+A ++ G P F N +++L
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--------FYDENDAKLFEQIL 231
Query: 829 DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
S D S + ++++PE R T ++ Q
Sbjct: 232 KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
NDFD +GKG G V + + A+G A+K + + E + L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 661 RNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG--IVDAL 717
+ + Y F H R F++ EY L LS + +T G IV AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 118
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
Y+H+ +V+RDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
+ D + GV+ E++ G+ P + L I ++E+ PR +P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPE 231
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 93/198 (46%), Gaps = 7/198 (3%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKGG Y ++ + + E+ A K + + +++ E+ + + ++V +G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
F +++V E +C +L K + ++ + + Y+HN+ +
Sbjct: 94 FFEDDDFVYVVLE---ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 147
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+ L+ + + + DFG+A ++ D +L GT Y+APE+ + +
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 207
Query: 789 DVYSFGVLALEVIKGKHP 806
D++S G + ++ GK P
Sbjct: 208 DIWSLGCILYTLLVGKPP 225
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 643 TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLG 702
+ E L E + ++ + IV++ G C +V E ++ L L + K+
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-- 126
Query: 703 WTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS 762
+ ++ + + Y+ F VHRD++++NVLL ++ A +SDFG++K L+ D +
Sbjct: 127 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 763 NWTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 183 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 643 TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLG 702
+ E L E + ++ + IV++ G C +V E ++ L L + K+
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-- 126
Query: 703 WTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS 762
+ ++ + + Y+ F VHRD++++NVLL ++ A +SDFG++K L+ D +
Sbjct: 127 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 763 NWTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 183 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
NDFD +GKG G V + + A+G A+K + + E + L H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 661 RNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG--IVDAL 717
+ + Y F H R F++ EY L LS + +T G IV AL
Sbjct: 70 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 123
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
Y+H+ +V+RDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 124 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
+ D + GV+ E++ G+ P + L I ++E+ PR +P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPE 236
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 24/241 (9%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSL 688
+AVK + + +F+ EV A+ + HRN++++YG L + +V E + SL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 97
Query: 689 AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHV 748
L LG R + + + + Y+ + F +HRD++++N+LL + +
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKI 152
Query: 749 SDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GK 804
DFG+ + L + + + + APE T + D + FGV E+ G+
Sbjct: 153 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 805 HPRDFISSMSFSSLNLNIALDEM--LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P + LN + L ++ RLP P D I V + C PE RP
Sbjct: 213 EP--------WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCWAHKPEDRP 260
Query: 863 T 863
T
Sbjct: 261 T 261
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 610 IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
+G+G G V + + +GE +AVK G + E++ L ++H NIV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--ADLKKEIEILRNLYHENIV 86
Query: 665 KVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
K G C + ++ E+ SL L + NL +++ I + Y+ +
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGS 144
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELA 779
+ VHRD++++NVL++ E++ + DFG+ K ++ D T + + APE
Sbjct: 145 RQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 780 YTMKVTEKCDVYSFGVLALEVI 801
K DV+SFGV E++
Sbjct: 202 MQSKFYIASDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 610 IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
+G+G G V + + +GE +AVK G + E++ L ++H NIV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--ADLKKEIEILRNLYHENIV 74
Query: 665 KVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
K G C + ++ E+ SL L + NL +++ I + Y+ +
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGS 132
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELA 779
+ VHRD++++NVL++ E++ + DFG+ K ++ D T + + APE
Sbjct: 133 RQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 780 YTMKVTEKCDVYSFGVLALEVI 801
K DV+SFGV E++
Sbjct: 190 MQSKFYIASDVWSFGVTLHELL 211
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 604 FDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQ---EFLNEVKALTE-- 657
+D + IG+G V A+G AVK E+T ++ E L EV+ T
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIM------EVTAERLSPEQLEEVREATRRE 149
Query: 658 -------IWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMI 710
H +I+ + +F+V++ + L L+ A L +++
Sbjct: 150 THILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIM 206
Query: 711 KGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT 770
+ +++A+S++H + IVHRD+ +N+LLD + +SDFG + L+P EL GT
Sbjct: 207 RSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLRELCGT 262
Query: 771 YGYVAPE-LAYTMKVT-----EKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIAL 824
GY+APE L +M T ++ D+++ GV+ ++ G P F + L
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP--------FWHRRQILML 314
Query: 825 DEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
+++ + S D+ ++ ++ + +PE+R T ++ Q
Sbjct: 315 RMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 93/198 (46%), Gaps = 7/198 (3%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKGG Y ++ + + E+ A K + + +++ E+ + + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
F +++V E +C +L K + ++ + + Y+HN+ +
Sbjct: 110 FFEDDDFVYVVLE---ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+ L+ + + + DFG+A ++ D +L GT Y+APE+ + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 223
Query: 789 DVYSFGVLALEVIKGKHP 806
D++S G + ++ GK P
Sbjct: 224 DIWSLGCILYTLLVGKPP 241
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 609 CIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
IGKG V +++ + +G+ +AVK + Q+ F EV+ + H NIVK++
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLNHPNIVKLF 79
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ L++V EY S + A + IV A+ Y H
Sbjct: 80 EVIETEKTLYLVXEY---ASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-E 786
IVHRD+ ++N+LLD + ++DFG + + G Y APEL K
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 787 KCDVYSFGVLALEVIKGKHPRD 808
+ DV+S GV+ ++ G P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 65
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 66 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQ 122
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I + ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 123 IAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 232
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 233 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 266
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 72
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I+ C L + + N+G +N
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 129
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 130 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 239
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 240 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 273
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 57 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 110
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 165
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS----SNWTELAGTYGY 773
Y+ + F VHRD++++N +LD + V+DFG+A+ + N T +
Sbjct: 166 KYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 280
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 281 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 306
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 70
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I+ C L + + N+G +N
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 127
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 237
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 238 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 271
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 56 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 109
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 164
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS----SNWTELAGTYGY 773
Y+ + F VHRD++++N +LD + V+DFG+A+ + N T +
Sbjct: 165 KYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 279
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 280 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 305
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 23/233 (9%)
Query: 640 GEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK 699
G +FQ + + A+ + H +IV++ G C L +V +Y + SL + A
Sbjct: 73 GRQSFQA-VTDHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGA- 129
Query: 700 NLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759
LG +N I + Y+ +VHR+++++NVLL ++ V+DFG+A L P
Sbjct: 130 -LGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 185
Query: 760 DSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFS 816
D ++E ++A E + K T + DV+S+GV E++ G P ++
Sbjct: 186 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP--------YA 237
Query: 817 SLNLNIALDEMLD-PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVC 868
L L D + RL P D + +V V +DEN RPT +++
Sbjct: 238 GLRLAEVPDLLEKGERLAQPQICTID--VYMVMVKCWMIDEN--IRPTFKELA 286
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 32/258 (12%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIVYEYFKMCS 687
+AVK S + ++ ++E+K ++ + H NIV + G C H + ++ EY
Sbjct: 71 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 688 LAVILSNDAAA-------KNLGWTRRMNMIKGIVDALSYMHN-DCFPPIVHRDISSKNVL 739
L L A A + L ++ + ++++ + +C +HRD++++NVL
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVL 184
Query: 740 LDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLA 797
L + A + DFG+A+ + DS+ + ++APE + T + DV+S+G+L
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 244
Query: 798 LEVIK---GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCV 854
E+ +P ++S + + +M P +N++ SI++ +C
Sbjct: 245 WEIFSLGLNPYPGILVNSKFYKLVKDGY---QMAQPAF--APKNIY----SIMQ---ACW 292
Query: 855 DENPESRPTMQKVCQLLK 872
P RPT Q++C L+
Sbjct: 293 ALEPTHRPTFQQICSFLQ 310
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 25/234 (10%)
Query: 640 GEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK 699
G +FQ + + A+ + H +IV++ G C L +V +Y + SL + A
Sbjct: 55 GRQSFQA-VTDHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGA- 111
Query: 700 NLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759
LG +N I + Y+ +VHR+++++NVLL ++ V+DFG+A L P
Sbjct: 112 -LGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167
Query: 760 DSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFS 816
D ++E ++A E + K T + DV+S+GV E++ G P ++
Sbjct: 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP--------YA 219
Query: 817 SLNLNIALDEMLDP--RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVC 868
L L + ++L+ RL P D + +V V +DEN RPT +++
Sbjct: 220 GLRLA-EVPDLLEKGERLAQPQICTID--VYMVMVKCWMIDEN--IRPTFKELA 268
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 71
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I+ C L + + N+G +N
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 128
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 238
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 239 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 272
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 37 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 90
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 145
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS----NWTELAGTYGY 773
Y+ + F VHRD++++N +LD + V+DFG+A+ + N T +
Sbjct: 146 KYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 260
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 261 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 286
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 75
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQ 132
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 242
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 243 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 596 EIIRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKA 654
+I DF +GKG G V++++ + + A+K + + + E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 655 LTEIWHRNIVKVYGFCLHV--RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
L+ W + + FC +LF V EY L + + +R
Sbjct: 71 LSLAWEHPFL-THMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAE 126
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
I+ L ++H+ IV+RD+ N+LLD + ++DFG+ K + GT
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD 183
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ K D +SFGVL E++ G+ P
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 69
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I+ C L + + N+G +N
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 126
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 236
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 237 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 270
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 30 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 83
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 138
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS----SNWTELAGTYGY 773
Y+ + F VHRD++++N +LD + V+DFG+A+ + N T +
Sbjct: 139 KYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 253
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 254 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 279
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 71
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 128
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 238
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 239 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 68
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I+ C L + + N+G +N
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 125
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 235
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 236 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 70
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 127
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 237
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 238 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 271
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 74
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 75 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQ 131
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 132 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 241
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 242 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 275
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKGG Y ++ + + E+ A K + + +++ E+ + + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
F +++V E +C +L K + ++ + + Y+HN+ +
Sbjct: 110 FFEDDDFVYVVLE---ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+ L+ + + + DFG+A ++ D L GT Y+APE+ + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEV 223
Query: 789 DVYSFGVLALEVIKGKHP 806
D++S G + ++ GK P
Sbjct: 224 DIWSLGCILYTLLVGKPP 241
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 91
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 146
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS----SNWTELAGTYGY 773
Y+ + F VHRD++++N +LD + V+DFG+A+ + N T +
Sbjct: 147 KYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 261
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 262 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL ++ D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 68
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 125
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 235
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 236 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALT 656
+RA + D +G G G+V + +G +A+KK + P E+ F + E++ L
Sbjct: 23 VRAV--YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-FAKRAYRELRLLK 79
Query: 657 EIWHRNIVKVYGFCLHVRHL--FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
+ H N++ + L F + Y M + L + LG R ++ ++
Sbjct: 80 HMRHENVIGLLDVFTPDETLDDFTDF-YLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML 138
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG---TY 771
L Y+H I+HRD+ N+ ++ + E + DFG+A+ + DS E+ G T
Sbjct: 139 KGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADS----EMXGXVVTR 189
Query: 772 GYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK 804
Y APE+ M+ T+ D++S G + E+I GK
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+GKGG Y ++ + + E+ A K + + +++ E+ + + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
F +++V E +C +L K + ++ + + Y+HN+ +
Sbjct: 110 FFEDDDFVYVVLE---ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+ L+ + + + DFG+A ++ D L GT Y+APE+ + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEV 223
Query: 789 DVYSFGVLALEVIKGKHP 806
D++S G + ++ GK P
Sbjct: 224 DIWSLGCILYTLLVGKPP 241
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 93
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 94 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 150
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 151 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 260
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 261 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 294
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 71
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQ 128
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 238
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 239 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 10/205 (4%)
Query: 606 DEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
D +GKG G VY + S ++ IA+K+ + + Q E+ + H+NIV
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHKNIV 82
Query: 665 KVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ G + I E SL+ +L + K I++ L Y+H++
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN- 141
Query: 725 FPPIVHRDISSKNVLLD-FENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL--AYT 781
IVHRDI NVL++ + +SDFG +K L + GT Y+APE+
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 782 MKVTEKCDVYSFGVLALEVIKGKHP 806
+ D++S G +E+ GK P
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK L G + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG-----KAFKNRELQIMRKLDHC 73
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 74
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 135 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 190
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 608 HCIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
CIG+G G V YMS +A+K + + +++FL E + + H +I
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHI 101
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHN 722
VK+ G + ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 102 VKLIGV-ITENPVWIIME---LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 157
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAY 780
F VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE
Sbjct: 158 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 213
Query: 781 TMKVTEKCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRN 838
+ T DV+ FGV E+ + G P F + N + + + RLP P N
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-N 264
Query: 839 VHDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 265 CPPTLYSLM---TKCWAYDPSRRP 285
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 10/205 (4%)
Query: 606 DEHCIGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
D +GKG G VY + S ++ IA+K+ + + Q E+ + H+NIV
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHKNIV 68
Query: 665 KVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ G + I E SL+ +L + K I++ L Y+H++
Sbjct: 69 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN- 127
Query: 725 FPPIVHRDISSKNVLLD-FENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL--AYT 781
IVHRDI NVL++ + +SDFG +K L + GT Y+APE+
Sbjct: 128 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 782 MKVTEKCDVYSFGVLALEVIKGKHP 806
+ D++S G +E+ GK P
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 33 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 86
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 141
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS----SNWTELAGTYGY 773
Y+ + F VHRD++++N +LD + V+DFG+A+ + N T +
Sbjct: 142 KYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 256
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 257 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 282
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 608 HCIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
CIG+G G V YMS +A+K + + +++FL E + + H +I
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHI 73
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHN 722
VK+ G + ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 74 VKLIGV-ITENPVWIIME---LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAY 780
F VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE
Sbjct: 130 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 781 TMKVTEKCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRN 838
+ T DV+ FGV E+ + G P F + N + + + RLP P N
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-N 236
Query: 839 VHDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 237 CPPTLYSLM---TKCWAYDPSRRP 257
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 91
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 146
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS----SNWTELAGTYGY 773
Y+ + F VHRD++++N +LD + V+DFG+A+ + N T +
Sbjct: 147 KYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 261
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 262 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 123/262 (46%), Gaps = 36/262 (13%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIVYEYFKMCS 687
+AVK S + ++ ++E+K ++ + H NIV + G C H + ++ EY
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 688 L-------AVILSNDAA---AKNLGWTRRM-NMIKGIVDALSYMHN-DCFPPIVHRDISS 735
L + +L D A A + TR + + + ++++ + +C +HRD+++
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAA 192
Query: 736 KNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSF 793
+NVLL + A + DFG+A+ + DS+ + ++APE + T + DV+S+
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 794 GVLALEVIK---GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVT 850
G+L E+ +P ++S + + +M P +N++ SI++
Sbjct: 253 GILLWEIFSLGLNPYPGILVNSKFYKLVKDGY---QMAQPAF--APKNIY----SIMQ-- 301
Query: 851 ISCVDENPESRPTMQKVCQLLK 872
+C P RPT Q++C L+
Sbjct: 302 -ACWALEPTHRPTFQQICSFLQ 322
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 36/277 (12%)
Query: 602 NDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+DF+ +G G G V+ +S SG ++A K H L + + + + E++ L E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 82
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDAL 717
IV YG + I E+ SL D K G + K ++ L
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKKAGRIPEQILGKVSIAVIKGL 136
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+Y+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 137 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 192
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLD-------P 830
+ + D++S G+ +E+ G++P I S S S +A+ E+LD P
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP---IGSGSGS-----MAIFELLDYIVNEPPP 244
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
+LP+ + + + C+ +NP R ++++
Sbjct: 245 KLPSGVFS-----LEFQDFVNKCLIKNPAERADLKQL 276
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 36 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 89
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 144
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS----SNWTELAGTYGY 773
Y+ + F VHRD++++N +LD + V+DFG+A+ + N T +
Sbjct: 145 KYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 259
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 260 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 285
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 608 HCIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
CIG+G G V YMS +A+K + + +++FL E + + H +I
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHI 453
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHN 722
VK+ G + ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 454 VKLIGV-ITENPVWIIME---LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAY 780
F VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE
Sbjct: 510 KRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 565
Query: 781 TMKVTEKCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRN 838
+ T DV+ FGV E+ + G P F + N + + + RLP P N
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-N 616
Query: 839 VHDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 617 CPPTLYSLM---TKCWAYDPSRRP 637
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + F N E++ + ++ H
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 77
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 138 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 193
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 37 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 90
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 145
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS----SNWTELAGTYGY 773
Y+ + F VHRD++++N +LD + V+DFG+A+ + N T +
Sbjct: 146 KYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 260
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 261 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 286
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 73
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 35 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 88
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 143
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS----SNWTELAGTYGY 773
Y+ + F VHRD++++N +LD + V+DFG+A+ + N T +
Sbjct: 144 KYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 258
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 259 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 284
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 81
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 142 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 197
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 92
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 153 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 208
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 32/258 (12%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIVYEYFKMCS 687
+AVK S + ++ ++E+K ++ + H NIV + G C H + ++ EY
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 688 LAVILSNDAAA-------KNLGWTRRMNMIKGIVDALSYMHN-DCFPPIVHRDISSKNVL 739
L L A A + L ++ + ++++ + +C +HRD++++NVL
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVL 192
Query: 740 LDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLA 797
L + A + DFG+A+ + DS+ + ++APE + T + DV+S+G+L
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
Query: 798 LEVIK---GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCV 854
E+ +P ++S + + +M P +N++ SI++ +C
Sbjct: 253 WEIFSLGLNPYPGILVNSKFYKLVKDGY---QMAQPAF--APKNIY----SIMQ---ACW 300
Query: 855 DENPESRPTMQKVCQLLK 872
P RPT Q++C L+
Sbjct: 301 ALEPTHRPTFQQICSFLQ 318
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 33/269 (12%)
Query: 610 IGKGGQGSVYMS-KLASGE-------IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
+G G G+VY + GE I +++ SP +E L+E + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP-----KANKEILDEAYVMAGVGSP 79
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+ ++ G CL + C L + N LG +N I +SY+
Sbjct: 80 YVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRG---RLGSQDLLNWCMQIAKGMSYLE 136
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELA 779
+ +VHRD++++NVL+ N ++DFG+A+ L D + + G ++A E
Sbjct: 137 D---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 780 YTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838
+ T + DV+S+GV E++ G P D I + L L++ RLP P
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL-----LEK--GERLPQPPIC 246
Query: 839 VHDKLISIVEVTISCVDENPESRPTMQKV 867
I + + + C + E RP +++
Sbjct: 247 T----IDVYMIMVKCWMIDSECRPRFREL 271
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 85
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 85
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 608 HCIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
CIG+G G V YMS +A+K + + +++FL E + + H +I
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHI 73
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHN 722
VK+ G + ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 74 VKLIGV-ITENPVWIIME---LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAY 780
F VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE
Sbjct: 130 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 781 TMKVTEKCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRN 838
+ T DV+ FGV E+ + G P F + N + + + RLP P N
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-N 236
Query: 839 VHDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 237 CPPTLYSLM---TKCWAYDPSRRP 257
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 610 IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
+GKG GSV + + +G ++AVK+ P + Q++F E++ L + IV
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 74
Query: 665 KVYG--FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
K G + + L +V EY L L A L +R + I + Y+ +
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGS 132
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG---YVAPELA 779
VHRD++++N+L++ E ++DFG+AK L D + + APE
Sbjct: 133 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 780 YTMKVTEKCDVYSFGVLALEVI 801
+ + DV+SFGV+ E+
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELF 211
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
YV+PEL + D+++ G + +++ G P F + + I L+
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 252
Query: 831 RLPTPSRNVHDKLI 844
+ +R++ +KL+
Sbjct: 253 KFFPKARDLVEKLL 266
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
YV+PEL + D+++ G + +++ G P F + + I L+
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 831 RLPTPSRNVHDKLI 844
+ +R++ +KL+
Sbjct: 254 KFFPKARDLVEKLL 267
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
YV+PEL + D+++ G + +++ G P F + + I L+
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 831 RLPTPSRNVHDKLI 844
+ +R++ +KL+
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 608 HCIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
CIG+G G V YMS +A+K + + +++FL E + + H +I
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHI 453
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHN 722
VK+ G + ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 454 VKLIGV-ITENPVWIIME---LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAY 780
F VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE
Sbjct: 510 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 565
Query: 781 TMKVTEKCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRN 838
+ T DV+ FGV E+ + G P F + N + + + RLP P N
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-N 616
Query: 839 VHDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 617 CPPTLYSLM---TKCWAYDPSRRP 637
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 608 HCIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
CIG+G G V YMS +A+K + + +++FL E + + H +I
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHI 76
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHN 722
VK+ G + ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 77 VKLIGV-ITENPVWIIME---LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 132
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAY 780
F VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE
Sbjct: 133 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 188
Query: 781 TMKVTEKCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRN 838
+ T DV+ FGV E+ + G P F + N + + + RLP P N
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-N 239
Query: 839 VHDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 240 CPPTLYSLM---TKCWAYDPSRRP 260
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 62
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 63 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 119
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 120 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 229
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 230 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 263
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
YV+PEL + D+++ G + +++ G P F + + I L+
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 252
Query: 831 RLPTPSRNVHDKLI 844
+ +R++ +KL+
Sbjct: 253 KFFPKARDLVEKLL 266
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 69
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIK 711
+ + + ++ ++ G CL I+ ++ +L K N+G +N
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQLIM----QLMPFGXLLDYVREHKDNIGSQYLLNWCV 125
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 126 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 772 --GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML 828
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK-- 235
Query: 829 DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 236 GERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 270
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 608 HCIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
CIG+G G V YMS +A+K + + +++FL E + + H +I
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHI 78
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHN 722
VK+ G + ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 79 VKLIGV-ITENPVWIIME---LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 134
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAY 780
F VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE
Sbjct: 135 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 190
Query: 781 TMKVTEKCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRN 838
+ T DV+ FGV E+ + G P F + N + + + RLP P N
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-N 241
Query: 839 VHDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 242 CPPTLYSLM---TKCWAYDPSRRP 262
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + F N E++ + ++ H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 107
Query: 662 NIVKVYGFCLHVR------HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 223
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + F N E++ + ++ H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 78
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 139 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 194
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
YV+PEL + D+++ G + +++ G P F + + I L+
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 260
Query: 831 RLPTPSRNVHDKLI 844
+ +R++ +KL+
Sbjct: 261 KFFPKARDLVEKLL 274
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYXQRTLREIKILLRFRHENIIGIND 92
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGT 770
IV AL Y+H I+HRD+ +N+LL+ + ++DFG AK L P+S + GT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
YV+PEL + D+++ G + +++ G P F + + I L+
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 237
Query: 831 RLPTPSRNVHDKLI 844
+ +R++ +KL+
Sbjct: 238 KFFPKARDLVEKLL 251
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 86
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 147 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 202
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IG G G+VY K + + K P P + Q F NEV L + H NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF---QAFRNEVAVLRKTRHVNILLFMGY 100
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ +L IV ++ + SL L + + +++ + + Y+H I+
Sbjct: 101 -MTKDNLAIVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAKN---II 154
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPELAYTMK 783
HRD+ S N+ L + DFG+A S W+ + G+ ++APE+
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 784 ---VTEKCDVYSFGVLALEVIKGKHPRDFI 810
+ + DVYS+G++ E++ G+ P I
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 610 IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
+GKG GSV + + +G ++AVK+ P + Q++F E++ L + IV
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 75
Query: 665 KVYG--FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
K G + + L +V EY L L A L +R + I + Y+ +
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGS 133
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG---YVAPELA 779
VHRD++++N+L++ E ++DFG+AK L D + + APE
Sbjct: 134 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 780 YTMKVTEKCDVYSFGVLALEVI 801
+ + DV+SFGV+ E+
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELF 212
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 31/263 (11%)
Query: 609 CIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
CIG+G G V YMS +A+K + + +++FL E + + H +IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 665 KVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHND 723
K+ G ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 75 KLIGVITE-NPVWIIME---LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 130
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYT 781
F VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE
Sbjct: 131 RF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 186
Query: 782 MKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRNV 839
+ T DV+ FGV E++ G P F + N + + + RLP P N
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-NC 237
Query: 840 HDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 238 PPTLYSLM---TKCWAYDPSRRP 257
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 28/225 (12%)
Query: 594 YEEIIRATNDFDDEHCIGKGGQGSVYMS-KLASGEIIAVK-----KFHSPLPGEMTFQQE 647
Y+E+++ ++ IG GG V ++ + +GE++A+K S LP T
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT---- 57
Query: 648 FLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRM 707
E++AL + H++I ++Y +F+V EY C + + L
Sbjct: 58 ---EIEALKNLRHQHICQLYHVLETANKIFMVLEY---CPGGELFDYIISQDRLSEEETR 111
Query: 708 NMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTEL 767
+ + IV A++Y+H+ + HRD+ +N+L D ++ + DFG+ KP + L
Sbjct: 112 VVFRQIVSAVAYVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCA--KPKGNKDYHL 166
Query: 768 ---AGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRD 808
G+ Y APEL + + DV+S G+L ++ G P D
Sbjct: 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEI 658
DF+ IG+G G V + K+ + E I K + EM + E F E L
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW--EMLKRAETACFREERDVLVNG 147
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLGWTRRMNMIKGIVDA 716
+ I ++ HL++V +Y+ L +LS D +++ M+ I D+
Sbjct: 148 DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-DS 206
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-GTYGYVA 775
+ +H VHRDI NVLLD ++DFG + D + + +A GT Y++
Sbjct: 207 IHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYIS 260
Query: 776 PELAYTM-----KVTEKCDVYSFGVLALEVIKGKHP 806
PE+ M K +CD +S GV E++ G+ P
Sbjct: 261 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 610 IGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
+GKG GSV + + +G ++AVK+ P + Q++F E++ L + IV
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 87
Query: 665 KVYG--FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
K G + + L +V EY L L A L +R + I + Y+ +
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGS 145
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG---YVAPELA 779
VHRD++++N+L++ E ++DFG+AK L D + + APE
Sbjct: 146 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 780 YTMKVTEKCDVYSFGVLALEVI 801
+ + DV+SFGV+ E+
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELF 224
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + F N E++ + ++ H
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 152
Query: 662 NIVKVYGFCLHVR------HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 213 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 268
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 29/279 (10%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 68
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIK 711
+ + + ++ ++ G CL I ++ +L K N+G +N
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLIT----QLMPFGXLLDYVREHKDNIGSQYLLNWCV 124
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 772 --GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEML 828
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK-- 234
Query: 829 DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 235 GERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 111
Query: 662 NIVKVYGFCLHVR------HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 172 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 227
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK L G + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG-----KAFKNRELQIMRKLDHC 73
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK L G + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG-----KAFKNRELQIMRKLDHC 73
Query: 662 NIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEI 658
DF+ IG+G G V + K+ + E I K + EM + E F E L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW--EMLKRAETACFREERDVLVNG 131
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLGWTRRMNMIKGIVDA 716
+ I ++ HL++V +Y+ L +LS D +++ M+ I D+
Sbjct: 132 DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-DS 190
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-GTYGYVA 775
+ +H VHRDI NVLLD ++DFG + D + + +A GT Y++
Sbjct: 191 IHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYIS 244
Query: 776 PELAYTM-----KVTEKCDVYSFGVLALEVIKGKHP 806
PE+ M K +CD +S GV E++ G+ P
Sbjct: 245 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 31/263 (11%)
Query: 609 CIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
CIG+G G V YMS +A+K + + +++FL E + + H +IV
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 71
Query: 665 KVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHND 723
K+ G ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 72 KLIGVITE-NPVWIIME---LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 127
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYT 781
F VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE
Sbjct: 128 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 183
Query: 782 MKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRNV 839
+ T DV+ FGV E++ G P F + N + + + RLP P N
Sbjct: 184 RRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-NC 234
Query: 840 HDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 235 PPTLYSLM---TKCWAYDPSRRP 254
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 31/263 (11%)
Query: 609 CIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV 664
CIG+G G V YMS +A+K + + +++FL E + + H +IV
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 76
Query: 665 KVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHND 723
K+ G ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 77 KLIGVITE-NPVWIIME---LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 132
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYT 781
F VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE
Sbjct: 133 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 188
Query: 782 MKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRNV 839
+ T DV+ FGV E++ G P F + N + + + RLP P N
Sbjct: 189 RRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-NC 239
Query: 840 HDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 240 PPTLYSLM---TKCWAYDPSRRP 259
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 109
Query: 662 NIVKVYGFCLHVR------HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 170 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 225
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSP--------LPGEMTFQQEFLN 650
AT+ ++ IG G G+VY ++ SG +A+K P LP + L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 651 EVKALTEIWHRNIVKVYGFCLHVR-----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
++A H N+V++ C R + +V+E+ L L + A L
Sbjct: 67 RLEAFE---HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAET 121
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT 765
++++ + L ++H +C IVHRD+ +N+L+ ++DFG+A+ + T
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LT 177
Query: 766 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 804
+ T Y APE+ D++S G + E+ + K
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + F N E++ + ++ H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 107
Query: 662 NIVKVYGFCLHVR------HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 223
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-- 659
DFD IG+G V + +L + I K + E+ E ++ V+ ++
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV---VKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 660 ---HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDA 716
H +V ++ LF V EY L + + L I A
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 118
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF-LKPDSSNWTELAGTYGYVA 775
L+Y+H I++RD+ NVLLD E ++D+G+ K L+P + + GT Y+A
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 174
Query: 776 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISS 812
PE+ D ++ GVL E++ G+ P D + S
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 211
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLAFRHENIIGIND 90
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 144
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ ++ + DFG+A+ PD + TE T Y APE+
Sbjct: 145 --ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 88
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 142
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 88
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 142
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 39 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 92
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 147
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDS-SNWTELAGTYGY 773
++ + F VHRD++++N +LD + V+DFG+A+ + + DS N T +
Sbjct: 148 KFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 262
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 263 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 288
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 70
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I+ C L + + N+G +N
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 127
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 237
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 238 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 271
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 97 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 150
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 205
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDS-SNWTELAGTYGY 773
++ + F VHRD++++N +LD + V+DFG+A+ + + DS N T +
Sbjct: 206 KFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 320
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 321 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 346
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 604 FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLN-EVKALTEIWHR 661
+ D IG G G VY +KL SGE++A+KK + + F N E++ + ++ H
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 101
Query: 662 NIVKVYGFCLHVR------HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
NIV++ F +L +V +Y V A + L + +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 774
+L+Y+H+ I HRDI +N+LLD + + DFG AK L N + + Y Y
Sbjct: 162 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 217
Query: 775 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
APEL + T DV+S G + E++ G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 75
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQ 132
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 242
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 243 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 23/241 (9%)
Query: 575 SPGNSRGLLSVLTFEGKIIYEEIIRATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKK 633
S G+S LT G+ EI ND ++ +G G G V+ + +G +IAVK+
Sbjct: 2 SSGSSGKQTGYLTIGGQRYQAEI----NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQ 57
Query: 634 FHSPLPGEMTFQQEFLNEVKALTEIWH-RNIVKVYGFCLHVRHLFIVYEYFKMCS--LAV 690
G + L ++ + + IV+ +G + +FI E C+ L
Sbjct: 58 MRRS--GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKK 115
Query: 691 ILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSD 750
+ + LG M IV AL Y+ ++HRD+ N+LLD + + D
Sbjct: 116 RMQGPIPERILG-----KMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCD 168
Query: 751 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKH 805
FGI+ L D + AG Y+APE T+ + DV+S G+ +E+ G+
Sbjct: 169 FGISGRLVDDKAK-DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQF 227
Query: 806 P 806
P
Sbjct: 228 P 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 88
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 142
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-- 659
DFD IG+G V + +L + I K + E+ E ++ V+ ++
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV---VKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 660 ---HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDA 716
H +V ++ LF V EY L + + L I A
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 122
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF-LKPDSSNWTELAGTYGYVA 775
L+Y+H I++RD+ NVLLD E ++D+G+ K L+P + + GT Y+A
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 178
Query: 776 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISS 812
PE+ D ++ GVL E++ G+ P D + S
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 215
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 39 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 92
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 147
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDS-SNWTELAGTYGY 773
++ + F VHRD++++N +LD + V+DFG+A+ + + DS N T +
Sbjct: 148 KFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 262
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 263 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 288
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 608 HCIGKGGQGSV----YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
CIG+G G V YMS +A+K + + +++FL E + + H +I
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHI 73
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK-NLGWTRRMNMIKGIVDALSYMHN 722
VK+ G + ++I+ E +C+L + S K +L + + AL+Y+ +
Sbjct: 74 VKLIGV-ITENPVWIIME---LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAY 780
F VHRDI+++NVL+ + + DFG++++++ DS+ G ++APE
Sbjct: 130 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESIN 185
Query: 781 TMKVTEKCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEMLD-PRLPTPSRN 838
+ T DV+ FGV E+ + G P F + N + + + RLP P N
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP--------FQGVKNNDVIGRIENGERLPMPP-N 236
Query: 839 VHDKLISIVEVTISCVDENPESRP 862
L S++ C +P RP
Sbjct: 237 CPPTLYSLM---TKCWAYDPSRRP 257
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 72
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I+ C L + + N+G +N
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 129
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 130 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 239
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 240 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 273
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
Query: 604 FDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
F D +G+GG G V+ ++ A+G++ A KK + + Q + E K L ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 663 IVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSN-DAAAKNLGWTRRMNMIKGIVDALSYM 720
IV + Y F L +V + + N D R + IV L ++
Sbjct: 247 IVSLAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H I++RD+ +NVLLD + +SD G+A LK + AGT G++APEL
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHP 806
+ D ++ GV E+I + P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
Query: 604 FDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
F D +G+GG G V+ ++ A+G++ A KK + + Q + E K L ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 663 IVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSN-DAAAKNLGWTRRMNMIKGIVDALSYM 720
IV + Y F L +V + + N D R + IV L ++
Sbjct: 247 IVSLAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H I++RD+ +NVLLD + +SD G+A LK + AGT G++APEL
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHP 806
+ D ++ GV E+I + P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 96
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 150
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 151 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 88
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 142
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 56/284 (19%)
Query: 610 IGKGGQGSV-YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI----- 663
+G+G G V M + SG+I+AVK+ + + + Q+ L ++ +I R +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDL----DISMRTVDCPFT 112
Query: 664 VKVYGFCLHVRHLFIVYE---------YFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
V YG ++I E Y ++ + D K + IV
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK---------IAVSIV 163
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL ++H+ ++HRD+ NVL++ + + DFGI+ +L DS T AG Y+
Sbjct: 164 KALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYM 220
Query: 775 APEL--------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826
APE Y++ K D++S G+ +E+ + P D + F L + E
Sbjct: 221 APERINPELNQKGYSV----KSDIWSLGITMIELAILRFPYDSWGT-PFQQLKQVV---E 272
Query: 827 MLDPRLPTPSRNVHDKL-ISIVEVTISCVDENPESRPTMQKVCQ 869
P+LP DK V+ T C+ +N + RPT ++ Q
Sbjct: 273 EPSPQLPA------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 126/299 (42%), Gaps = 50/299 (16%)
Query: 609 CIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
C+GKG G V+ L GE +AVK F S + E N V + H NI+
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVL----LRHDNILGFIA 69
Query: 669 FCLHVR----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ R L+++ Y + SL L +L + + L+++H +
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEI 125
Query: 725 F-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-----GTYGYV 774
F P I HRD S+NVL+ + ++D G+A + S++ ++ GT Y+
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 775 APELAYTMKVTEKC-------DVYSFGVLALEVIKGKHPRDFISSM------------SF 815
APE+ ++ C D+++FG++ E+ + + SF
Sbjct: 185 APEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSF 243
Query: 816 SSLNLNIALDEMLDPRLPT-PSRNVHDKLIS-IVEVTISCVDENPESRPTMQKVCQLLK 872
+ + +D+ + PT P+R D ++S + ++ C NP +R T ++ + L+
Sbjct: 244 EDMKKVVCVDQ----QTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQ 298
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
Query: 604 FDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
F D +G+GG G V+ ++ A+G++ A KK + + Q + E K L ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 663 IVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSN-DAAAKNLGWTRRMNMIKGIVDALSYM 720
IV + Y F L +V + + N D R + IV L ++
Sbjct: 247 IVSLAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H I++RD+ +NVLLD + +SD G+A LK + AGT G++APEL
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHP 806
+ D ++ GV E+I + P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 90
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 144
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 92
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-- 659
DFD IG+G V + +L + I + + E+ E ++ V+ ++
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRV---VKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 660 ---HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDA 716
H +V ++ LF V EY L + + L I A
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 165
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF-LKPDSSNWTELAGTYGYVA 775
L+Y+H I++RD+ NVLLD E ++D+G+ K L+P + T GT Y+A
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIA 221
Query: 776 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISS 812
PE+ D ++ GVL E++ G+ P D + S
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 91
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 146
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDS-SNWTELAGTYGY 773
++ + F VHRD++++N +LD + V+DFG+A+ + + DS N T +
Sbjct: 147 KFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 261
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 262 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 43 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 96
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 151
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDS-SNWTELAGTYGY 773
++ + F VHRD++++N +LD + V+DFG+A+ + + DS N T +
Sbjct: 152 KFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 266
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 267 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 292
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 108
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 162
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 163 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
Query: 604 FDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
F D +G+GG G V+ ++ A+G++ A KK + + Q + E K L ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 663 IVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSN-DAAAKNLGWTRRMNMIKGIVDALSYM 720
IV + Y F L +V + + N D R + IV L ++
Sbjct: 247 IVSLAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H I++RD+ +NVLLD + +SD G+A LK + AGT G++APEL
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHP 806
+ D ++ GV E+I + P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 88
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 142
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 68
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 125
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 235
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 236 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 75/319 (23%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNE--VKALTEIWHRNIVKVY 667
IG+G G+VY L +AVK F +Q F+NE + + + H NI +
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVF------SFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 668 GFCLHVR-----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
V +V EY+ SL LS + W + + L+Y+H
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHT 129
Query: 723 DC------FPPIVHRDISSKNVLLDFENEAHVSDFGIA------KFLKP---DSSNWTEL 767
+ P I HRD++S+NVL+ + +SDFG++ + ++P D++ +E+
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 768 AGTYGYVAPEL---AYTMKVTE----KCDVYSFGVLALEVIK------------------ 802
GT Y+APE+ A ++ E + D+Y+ G++ E+
Sbjct: 190 -GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF 248
Query: 803 ----GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENP 858
G HP +F + + ++ E P+ P + + S+ E C D++
Sbjct: 249 QTEVGNHP-------TFEDMQVLVS-REKQRPKFPEAWKENSLAVRSLKETIEDCWDQDA 300
Query: 859 ESRPTMQ----KVCQLLKI 873
E+R T Q ++ +L+ I
Sbjct: 301 EARLTAQXAEERMAELMMI 319
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-- 659
DFD IG+G V + +L + I K + E+ E ++ V+ ++
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV---VKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 660 ---HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDA 716
H +V ++ LF V EY L + + L I A
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 133
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF-LKPDSSNWTELAGTYGYVA 775
L+Y+H I++RD+ NVLLD E ++D+G+ K L+P + + GT Y+A
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 189
Query: 776 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISS 812
PE+ D ++ GVL E++ G+ P D + S
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 226
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 36 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 89
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 144
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDS-SNWTELAGTYGY 773
++ + F VHRD++++N +LD + V+DFG+A+ + + DS N T +
Sbjct: 145 KFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 259
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 260 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 285
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIWHR 661
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 91
Query: 662 NIVKVYGFCLHVR-HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDAL 717
N++ + G CL +V Y K L + N+ K+L + + +
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 146
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDS-SNWTELAGTYGY 773
++ + F VHRD++++N +LD + V+DFG+A+ + + DS N T +
Sbjct: 147 KFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPR- 831
+A E T K T K DV+SFGVL E++ +G P +++ + L +L P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEY 261
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
P P + EV + C E RP+ ++
Sbjct: 262 CPDP----------LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G GG G V +GE +A+K+ L + ++ + E++ + ++ H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN--RERWCLEIQIMKKLNHPNVVSARE 79
Query: 669 FCLHVRHL------FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
++ L + EY + L L+ L ++ I AL Y+H
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 723 DCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+ I+HRD+ +N++L + + D G AK L TE GT Y+APEL
Sbjct: 140 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELL 195
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
K T D +SFG LA E I G P
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G GG G V +GE +A+K+ L + ++ + E++ + ++ H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN--RERWCLEIQIMKKLNHPNVVSARE 80
Query: 669 FCLHVRHL------FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
++ L + EY + L L+ L ++ I AL Y+H
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 723 DCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+ I+HRD+ +N++L + + D G AK L TE GT Y+APEL
Sbjct: 141 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELL 196
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
K T D +SFG LA E I G P
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ LS+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 71
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQ 128
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 238
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + C + +SRP +++
Sbjct: 239 ERLPQPPICT----IDVYMIMRKCWMIDADSRPKFREL 272
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 20/225 (8%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
+E L+E + + + ++ ++ G CL I+ C L + + N+G
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK---DNIGSQY 125
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT 765
+N I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + +
Sbjct: 126 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 766 ELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNI 822
G ++A E T + DV+S+GV E++ G P D I + SS+
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---- 238
Query: 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
L++ RLP P I + + + C + +SRP +++
Sbjct: 239 -LEK--GERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 614 GQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
G+GS KLA +G+ +A+K + + + Q E+ L + H +I+K+Y
Sbjct: 22 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 81
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ +V EY I+ D ++ RR + I+ A+ Y H IV
Sbjct: 82 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF--FQQIISAVEYCHRH---KIV 134
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKC 788
HRD+ +N+LLD ++DFG++ + D + G+ Y APE ++ + +
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 193
Query: 789 DVYSFGVLALEVIKGKHPRD 808
DV+S GV+ ++ + P D
Sbjct: 194 DVWSCGVILYVMLCRRLPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 614 GQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
G+GS KLA +G+ +A+K + + + Q E+ L + H +I+K+Y
Sbjct: 17 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 76
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ +V EY I+ D ++ RR + I+ A+ Y H IV
Sbjct: 77 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF--FQQIISAVEYCHRH---KIV 129
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKC 788
HRD+ +N+LLD ++DFG++ + D + G+ Y APE ++ + +
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 188
Query: 789 DVYSFGVLALEVIKGKHPRD 808
DV+S GV+ ++ + P D
Sbjct: 189 DVWSCGVILYVMLCRRLPFD 208
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 93
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 147
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 86
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 140
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 94
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 148
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 149 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 85
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 139
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 140 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 92
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
N F +GKGG G V ++ A+G++ A KK + + LNE + L ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK----NLGWT-----RRMNMIK 711
R +V L YE L + L N K ++G R +
Sbjct: 244 RFVVS----------LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I L +H + IV+RD+ +N+LLD +SD G+A + P+ GT
Sbjct: 294 EICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTV 349
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
GY+APE+ + T D ++ G L E+I G+ P
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 86
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 140
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 123/262 (46%), Gaps = 36/262 (13%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIVYEYFKMCS 687
+AVK S + ++ ++E+K ++ + H NIV + G C H + ++ EY
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 688 L-------AVILSNDAA---AKNLGWTRRM-NMIKGIVDALSYMHN-DCFPPIVHRDISS 735
L + +L D A A + TR + + + ++++ + +C +HRD+++
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAA 192
Query: 736 KNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSF 793
+NVLL + A + DFG+A+ + DS+ + ++APE + T + DV+S+
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 794 GVLALEVIK---GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVT 850
G+L E+ +P ++S + + +M P +N++ SI++
Sbjct: 253 GILLWEIFSLGLNPYPGILVNSKFYKLVKDGY---QMAQPAF--APKNIY----SIMQ-- 301
Query: 851 ISCVDENPESRPTMQKVCQLLK 872
+C P RPT Q++C L+
Sbjct: 302 -ACWALEPTHRPTFQQICSFLQ 322
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLAFRHENIIGIND 90
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 144
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 614 GQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
G+GS KLA +G+ +A+K + + + Q E+ L + H +I+K+Y
Sbjct: 23 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 82
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ +V EY I+ D ++ RR + I+ A+ Y H IV
Sbjct: 83 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF--FQQIISAVEYCHRH---KIV 135
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKC 788
HRD+ +N+LLD ++DFG++ + D + G+ Y APE ++ + +
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 194
Query: 789 DVYSFGVLALEVIKGKHPRD 808
DV+S GV+ ++ + P D
Sbjct: 195 DVWSCGVILYVMLCRRLPFD 214
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 68
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ + + +A + + + ++ L++
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 127 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMV 205
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 68
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQ 125
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 235
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + C + +SRP +++
Sbjct: 236 ERLPQPPICT----IDVYMIMRKCWMIDADSRPKFREL 269
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEV---KAL 655
AT+ ++ IG G G+VY ++ SG +A+K P GE + EV + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRL 60
Query: 656 TEIWHRNIVKVYGFCLHVR-----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMI 710
H N+V++ C R + +V+E+ L L + A L +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLM 118
Query: 711 KGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT 770
+ + L ++H +C IVHRD+ +N+L+ ++DFG+A+ + + T
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPVVVT 174
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 804
Y APE+ D++S G + E+ + K
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEV---KAL 655
AT+ ++ IG G G+VY ++ SG +A+K P GE + EV + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRL 60
Query: 656 TEIWHRNIVKVYGFCLHVR-----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMI 710
H N+V++ C R + +V+E+ L L + A L +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLM 118
Query: 711 KGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT 770
+ + L ++H +C IVHRD+ +N+L+ ++DFG+A+ + + + T
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-T 174
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 804
Y APE+ D++S G + E+ + K
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 601 TNDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKK---FHSPLPGEMTFQQEFLNEVKALT 656
++DF + +G+G G V + +GEI+A+KK F PL F L E+K L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-----FALRTLREIKILK 64
Query: 657 EIWHRNIVKVYGFCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
H NI+ ++ + ++I+ E + VI + + ++ + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIY 119
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN-------- 763
+ A+ +H ++HRD+ N+L++ + V DFG+A+ + +++
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 764 --WTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEV 800
TE T Y APE+ T K + DV+S G + E+
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 601 TNDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKK---FHSPLPGEMTFQQEFLNEVKALT 656
++DF + +G+G G V + +GEI+A+KK F PL F L E+K L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-----FALRTLREIKILK 64
Query: 657 EIWHRNIVKVYGFCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
H NI+ ++ + ++I+ E + VI + + ++ + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIY 119
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN-------- 763
+ A+ +H ++HRD+ N+L++ + V DFG+A+ + +++
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 764 --WTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEV 800
TE T Y APE+ T K + DV+S G + E+
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ M L + + +A + + + ++ L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
N F +GKGG G V ++ A+G++ A KK + + LNE + L ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAK----NLGWT-----RRMNMIK 711
R +V L YE L + L N K ++G R +
Sbjct: 244 RFVVS----------LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
I L +H + IV+RD+ +N+LLD +SD G+A + P+ GT
Sbjct: 294 EICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTV 349
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
GY+APE+ + T D ++ G L E+I G+ P
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 20/225 (8%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
+E L+E + + + ++ ++ G CL I C L + + N+G
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK---DNIGSQY 125
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT 765
+N I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + +
Sbjct: 126 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 766 ELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNI 822
G ++A E T + DV+S+GV E++ G P D I + SS+
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---- 238
Query: 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
L++ RLP P I + + + C + +SRP +++
Sbjct: 239 -LEK--GERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ M + + +A + + + ++ L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 121 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 78
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 79 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 135
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 136 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 245
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + C + +SRP +++
Sbjct: 246 ERLPQPPICT----IDVYMIMRKCWMIDADSRPKFREL 279
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 614 GQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
G+GS KLA +G+ +A+K + + + Q E+ L + H +I+K+Y
Sbjct: 13 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 72
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ +V EY I+ D ++ RR + I+ A+ Y H IV
Sbjct: 73 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF--FQQIISAVEYCHRH---KIV 125
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKC 788
HRD+ +N+LLD ++DFG++ + D + G+ Y APE ++ + +
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 184
Query: 789 DVYSFGVLALEVIKGKHPRD 808
DV+S GV+ ++ + P D
Sbjct: 185 DVWSCGVILYVMLCRRLPFD 204
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 56/284 (19%)
Query: 610 IGKGGQGSV-YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI----- 663
+G+G G V M + SG+I+AVK+ + + + Q+ L ++ +I R +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDL----DISMRTVDCPFT 68
Query: 664 VKVYGFCLHVRHLFIVYE---------YFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
V YG ++I E Y ++ + D K + IV
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK---------IAVSIV 119
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL ++H+ ++HRD+ NVL++ + + DFGI+ +L D + + AG Y+
Sbjct: 120 KALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYM 176
Query: 775 APEL--------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826
APE Y++ K D++S G+ +E+ + P D + F L + E
Sbjct: 177 APERINPELNQKGYSV----KSDIWSLGITMIELAILRFPYDSWGT-PFQQLKQVV---E 228
Query: 827 MLDPRLPTPSRNVHDKLIS-IVEVTISCVDENPESRPTMQKVCQ 869
P+LP DK + V+ T C+ +N + RPT ++ Q
Sbjct: 229 EPSPQLPA------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 68
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ + + +A + + + ++ L++
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 127 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMV 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 61
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ + + +A + + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMV 198
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 625 SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFK 684
+G +AVK + + + E++ L H +I+K+Y F+V EY
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 685 MCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN 744
L + + + R + + I+ A+ Y H +VHRD+ +NVLLD
Sbjct: 95 GGELFDYICKHGRVEEMEARR---LFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHM 148
Query: 745 EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKG 803
A ++DFG++ + D + G+ Y APE ++ + + D++S GV+ ++ G
Sbjct: 149 NAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
Query: 804 KHPRD 808
P D
Sbjct: 208 TLPFD 212
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F + G G+VY + GE + A+K+ + +E L+E
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 68
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 125
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 235
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + + C + +SRP +++
Sbjct: 236 ERLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ M L + + +A + + + ++ L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
++F+ +GKG G V ++++ +G++ AVK + + + + E + L+ +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 661 RNIVKVYGFCLHV-RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
+ C LF V E+ L + ++ R I+ AL +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMF 139
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H+ I++RD+ NVLLD E ++DFG+ K + GT Y+APE+
Sbjct: 140 LHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL 196
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
M D ++ GVL E++ G P
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 92
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + ++ + + I+ L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ + + +A + + + ++ L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 175
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEV---KAL 655
AT+ ++ IG G G+VY ++ SG +A+K P GE + EV + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRL 60
Query: 656 TEIWHRNIVKVYGFCLHVR-----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMI 710
H N+V++ C R + +V+E+ L L + A L +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLM 118
Query: 711 KGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT 770
+ + L ++H +C IVHRD+ +N+L+ ++DFG+A+ + + T
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVVVT 174
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 804
Y APE+ D++S G + E+ + K
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ M L + + +A + + + ++ L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFM-DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ + + +A + + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 60
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A++K SP + T+ Q L E+K L H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 92
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN 708
L EV+ L ++ H NI+K++ +IV E + L K
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAAR 125
Query: 709 MIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN---EAHVSDFGIAKFLKPDSSNWT 765
+IK + ++YMH IVHRD+ +N+LL+ + + + DFG++ + ++
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMK 181
Query: 766 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ GT Y+APE+ EKCDV+S GV+ ++ G P
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN 708
L EV+ L ++ H NI+K++ +IV E + L K
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAAR 125
Query: 709 MIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN---EAHVSDFGIAKFLKPDSSNWT 765
+IK + ++YMH IVHRD+ +N+LL+ + + + DFG++ + ++
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMK 181
Query: 766 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ GT Y+APE+ EKCDV+S GV+ ++ G P
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 65
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ L++
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 124 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMV 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMV 197
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 602 NDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+DF+ +G G G V+ +S SG ++A K H L + + + + E++ L E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 125
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDAL 717
IV YG + I E+ SL +L K G + K ++ L
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGL 179
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+Y+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 180 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 235
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G+ +E+ G++P
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 47/288 (16%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L +K + ++ K D L+ H
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----SKRNEFVPYKDLYK---DFLTLEH 145
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 146 LICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 253
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 254 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 8/205 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 781 TMK-VTEKCDVYSFGVLALEVIKGK 804
K + D++S G + E++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 11/237 (4%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
N+F+ +GKG G V + K A+G A+K + L E + L H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 661 RNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
+ + Y F H R F++ EY L LS + + R IV AL Y
Sbjct: 68 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDY 123
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H++ +V+RD+ +N++LD + ++DFG+ K D + GT Y+APE+
Sbjct: 124 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 181
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
D + GV+ E++ G+ P + L I ++E+ PR P
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLFELILMEEIRFPRTLGPE 235
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 649 LNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN 708
L EV+ L ++ H NI+K++ +IV E + L K
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAAR 125
Query: 709 MIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN---EAHVSDFGIAKFLKPDSSNWT 765
+IK + ++YMH IVHRD+ +N+LL+ + + + DFG++ + ++
Sbjct: 126 IIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMK 181
Query: 766 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ GT Y+APE+ EKCDV+S GV+ ++ G P
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 602 NDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+DF+ +G G G V+ +S SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDAL 717
IV YG + I E+ SL D K G + K ++ L
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+Y+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G+ +E+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFC--LHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGW 703
++ E+ L ++ H N+VK+ + HL++V+E + + + +++
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 704 TRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN 763
++IKGI Y+H + I+HRDI N+L+ + ++DFG++ K +
Sbjct: 141 FYFQDLIKGI----EYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 764 WTELAGTYGYVAPE-LAYTMKV--TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNL 820
+ GT ++APE L+ T K+ + DV++ GV + G+ P F+ L+
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP--FMDE-RIMCLHS 250
Query: 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESR 861
I + P P + ++ D + + +D+NPESR
Sbjct: 251 KIKSQALEFPDQPDIAEDLKDLITRM-------LDKNPESR 284
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 19/227 (8%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
++E EV L + H NIV+ L+IV +Y C + A K + +
Sbjct: 67 REESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY---CEGGDLFKRINAQKGVLFQ 123
Query: 705 RR--MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS 762
++ I AL ++H+ I+HRDI S+N+ L + + DFGIA+ L
Sbjct: 124 EDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180
Query: 763 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNI 822
GT Y++PE+ K D+++ G + E+ KH +F + ++
Sbjct: 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH--------AFEAGSMKN 232
Query: 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
+ +++ P S + L S+V NP RP++ + +
Sbjct: 233 LVLKIISGSFPPVSLHYSYDLRSLVS---QLFKRNPRDRPSVNSILE 276
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 595 EEIIRATNDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVK 653
EE+ AT+ +G+G G V+ M +G AVKK + F+ E L
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-----FRAEELMACA 140
Query: 654 ALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGI 713
LT IV +YG + I E + SL ++ L R + +
Sbjct: 141 GLTSP---RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC---LPEDRALYYLGQA 194
Query: 714 VDALSYMHNDCFPPIVHRDISSKNVLLDFE-NEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
++ L Y+H+ I+H D+ + NVLL + + A + DFG A L+PD + L G Y
Sbjct: 195 LEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI 251
Query: 772 ----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
++APE+ K DV+S + L ++ G HP
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 70
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I+ C L + + N+G +N
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 127
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 237
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + C + +SRP +++
Sbjct: 238 ERLPQPPICT----IDVYMIMRKCWMIDADSRPKFREL 271
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 602 NDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+DF+ +G G G V+ +S SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDAL 717
IV YG + I E+ SL D K G + K ++ L
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+Y+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G+ +E+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 8/185 (4%)
Query: 625 SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFK 684
+G +AVK + + + E++ L H +I+K+Y F+V EY
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 685 MCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN 744
L + + + R + + I+ A+ Y H +VHRD+ +NVLLD
Sbjct: 95 GGELFDYICKHGRVEEMEARR---LFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHM 148
Query: 745 EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKG 803
A ++DFG++ + D G+ Y APE ++ + + D++S GV+ ++ G
Sbjct: 149 NAKIADFGLSNMMS-DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
Query: 804 KHPRD 808
P D
Sbjct: 208 TLPFD 212
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 8/207 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
N+F+ +GKG G V + K A+G A+K + L E + L H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 661 RNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
+ + Y F H R F++ EY L LS + + R IV AL Y
Sbjct: 70 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDY 125
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H++ +V+RD+ +N++LD + ++DFG+ K D + GT Y+APE+
Sbjct: 126 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 183
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
D + GV+ E++ G+ P
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + SGE +A+KK P E+ F + E+ L + H N++ +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENVIGLLD 108
Query: 669 FCLHVRHLFIVYEY-----FKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
L Y++ F L I+ + + + + + ++ ++ L Y+H+
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHSA 163
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-M 782
+VHRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ + M
Sbjct: 164 G---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV---VTRWYRAPEVILSWM 217
Query: 783 KVTEKCDVYSFGVLALEVIKGK 804
+ D++S G + E++ GK
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 601 TNDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKK---FHSPLPGEMTFQQEFLNEVKALT 656
++DF + +G+G G V + +GEI+A+KK F PL F L E+K L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-----FALRTLREIKILK 64
Query: 657 EIWHRNIVKVYGFCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
H NI+ ++ + ++I+ E + VI + + ++ + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIY 119
Query: 712 GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN-------- 763
+ A+ +H ++HRD+ N+L++ + V DFG+A+ + +++
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 764 --WTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEV 800
E T Y APE+ T K + DV+S G + E+
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 602 NDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+DF+ +G G G V+ +S SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDAL 717
IV YG + I E+ SL D K G + K ++ L
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+Y+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G+ +E+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
I++RD+ NV+LD E ++DFG+ K D E GT Y+APE+ +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKS 200
Query: 788 CDVYSFGVLALEVIKGKHPRD 808
D +++GVL E++ G+ P D
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFD 221
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 130/287 (45%), Gaps = 42/287 (14%)
Query: 236 LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNY 295
L+NLT +N N L+ P +NL KL +L+ +NQ P L NLT+L + L N
Sbjct: 62 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQ 118
Query: 296 LTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHS 355
+T + NL ++LS N +IS+ G L L+F N +T P + +
Sbjct: 119 ITD--IDPLKNLTNLNRLELSSNTI-SDISALSGLT-SLQQLNFG-NQVTDLKP--LANL 171
Query: 356 SQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSP----------------- 398
+ L LD+SSN V +I + L KL L+ +NQ+S ++P
Sbjct: 172 TTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQIS-DITPLGILTNLDELSLNGNQL 228
Query: 399 ----KLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQ 454
L SL L LDL++N++SN P S L L+EL L N + P + +
Sbjct: 229 KDIGTLASLTNLTDLDLANNQISNLAPLS----GLTKLTELKLGANQISNISP--LAGLT 282
Query: 455 SLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFK 501
+L L L+ N L + P + L ++ + +N + P S+ K
Sbjct: 283 ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 132/329 (40%), Gaps = 54/329 (16%)
Query: 6 NNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEI 65
NN L D P L+NL L D+ + NN+++ P L NLTNL L + N ++ P +
Sbjct: 72 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 125
Query: 66 GNFRFFSDLELSNNKLS----------------GSIPPSLGNLSNLATL-YLDTNSLSNS 108
N + LELS+N +S G+ L L+NL TL LD +S S
Sbjct: 126 KNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVS 185
Query: 109 IPSEXXXXXXXXXXXXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLS 168
S P LG LTNL L + N L +G + +L +L+
Sbjct: 186 DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLT 241
Query: 169 NLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGS 228
+L L+ N + P L L+ L L L N +S P N+L
Sbjct: 242 DLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNE--NQLEDI 297
Query: 229 IPISMGNLSNLTYLNLFENSLSGAIPY--------------------EYRNLVKLTILLL 268
PIS NL NLTYL L+ N++S P NL + L
Sbjct: 298 SPIS--NLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSA 355
Query: 269 GHNQFRGPIPILRNLTSLERVRLDRNYLT 297
GHNQ P L NLT + ++ L+ T
Sbjct: 356 GHNQISDLTP-LANLTRITQLGLNDQAWT 383
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 11/237 (4%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
N+F+ +GKG G V + K A+G A+K + L E + L H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 661 RNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
+ + Y F H R F++ EY L LS + + R IV AL Y
Sbjct: 69 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDY 124
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H++ +V+RD+ +N++LD + ++DFG+ K D + GT Y+APE+
Sbjct: 125 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 182
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836
D + GV+ E++ G+ P + L I ++E+ PR P
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLFELILMEEIRFPRTLGPE 236
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 117/278 (42%), Gaps = 27/278 (9%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEII----AVKKFHSPLPGEMTFQQEFLNEV 652
I +F +G G G+VY + GE + A+K+ + +E L+E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEA 70
Query: 653 KALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG 712
+ + + ++ ++ G CL I C L + + N+G +N
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQ 127
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
I ++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 772 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD 829
++A E T + DV+S+GV E++ G P D I + SS+ L++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--G 237
Query: 830 PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
RLP P I + + C + +SRP +++
Sbjct: 238 ERLPQPPICT----IDVYMIMRKCWMIDADSRPKFREL 271
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIVYEYFKMCS 687
+AVK S + ++ ++E+K ++ + H NIV + G C H + ++ EY
Sbjct: 64 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 688 LAVILSNDAAA--------------------KNLGWTRRMNMIKGIVDALSYMHN-DCFP 726
L L A A + L ++ + ++++ + +C
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC-- 179
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKV 784
+HRD++++NVLL + A + DFG+A+ + DS+ + ++APE +
Sbjct: 180 --IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 237
Query: 785 TEKCDVYSFGVLALEVIK---GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
T + DV+S+G+L E+ +P ++S + + +M P +N++
Sbjct: 238 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY---QMAQPAF--APKNIY- 291
Query: 842 KLISIVEVTISCVDENPESRPTMQKVCQLLK 872
SI++ +C P RPT Q++C L+
Sbjct: 292 ---SIMQ---ACWALEPTHRPTFQQICSFLQ 316
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 602 NDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+DF+ +G G G V+ +S SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDAL 717
IV YG + I E+ SL D K G + K ++ L
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+Y+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G+ +E+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 602 NDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+DF+ +G G G V+ +S SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDAL 717
IV YG + I E+ SL D K G + K ++ L
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+Y+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G+ +E+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 130/287 (45%), Gaps = 42/287 (14%)
Query: 236 LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNY 295
L+NLT +N N L+ P +NL KL +L+ +NQ P L NLT+L + L N
Sbjct: 62 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQ 118
Query: 296 LTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHS 355
+T + NL ++LS N +IS+ G L L+F N +T P + +
Sbjct: 119 ITD--IDPLKNLTNLNRLELSSNTI-SDISALSGLT-SLQQLNFG-NQVTDLKP--LANL 171
Query: 356 SQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSP----------------- 398
+ L LD+SSN V +I + L KL L+ +NQ+S ++P
Sbjct: 172 TTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQIS-DITPLGILTNLDELSLNGNQL 228
Query: 399 ----KLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQ 454
L SL L LDL++N++SN P S L L+EL L N + P + +
Sbjct: 229 KDIGTLASLTNLTDLDLANNQISNLAPLS----GLTKLTELKLGANQISNISP--LAGLT 282
Query: 455 SLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFK 501
+L L L+ N L + P + L ++ + +N + P S+ K
Sbjct: 283 ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 132/329 (40%), Gaps = 54/329 (16%)
Query: 6 NNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEI 65
NN L D P L+NL L D+ + NN+++ P L NLTNL L + N ++ P +
Sbjct: 72 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 125
Query: 66 GNFRFFSDLELSNNKLS----------------GSIPPSLGNLSNLATL-YLDTNSLSNS 108
N + LELS+N +S G+ L L+NL TL LD +S S
Sbjct: 126 KNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVS 185
Query: 109 IPSEXXXXXXXXXXXXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLS 168
S P LG LTNL L + N L +G + +L +L+
Sbjct: 186 DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLT 241
Query: 169 NLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGS 228
+L L+ N + P L L+ L L L N +S P N+L
Sbjct: 242 DLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNE--NQLEDI 297
Query: 229 IPISMGNLSNLTYLNLFENSLSGAIPY--------------------EYRNLVKLTILLL 268
PIS NL NLTYL L+ N++S P NL + L
Sbjct: 298 SPIS--NLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNINWLSA 355
Query: 269 GHNQFRGPIPILRNLTSLERVRLDRNYLT 297
GHNQ P L NLT + ++ L+ T
Sbjct: 356 GHNQISDLTP-LANLTRITQLGLNDQAWT 383
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 222
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 223 TVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 164
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 221
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 222 TVDIWSVGCIMAELLTGR 239
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 35/239 (14%)
Query: 609 CIGKGGQGSVYMSKLASG----EIIAVK-------KFHSPLPGEMTFQQEFLNEVKALTE 657
+G+G G V++ K SG ++ A+K K + +M E L E
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--------ERDILVE 82
Query: 658 IWHRNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDA--AAKNLGWTRRMNMIKGIV 714
+ H IVK+ Y F + L+++ ++ + L LS + +++ + + +
Sbjct: 83 VNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELA 136
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL ++H+ I++RD+ +N+LLD E ++DFG++K GT Y+
Sbjct: 137 LALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 193
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP---RDFISSMSFSSLNLNIALDEMLDP 830
APE+ T+ D +SFGVL E++ G P +D +M+ L + + + L P
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM-ILKAKLGMPQFLSP 251
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 35/239 (14%)
Query: 609 CIGKGGQGSVYMSKLASG----EIIAVK-------KFHSPLPGEMTFQQEFLNEVKALTE 657
+G+G G V++ K SG ++ A+K K + +M E L E
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--------ERDILVE 82
Query: 658 IWHRNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDA--AAKNLGWTRRMNMIKGIV 714
+ H IVK+ Y F + L+++ ++ + L LS + +++ + + +
Sbjct: 83 VNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELA 136
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL ++H+ I++RD+ +N+LLD E ++DFG++K GT Y+
Sbjct: 137 LALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 193
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP---RDFISSMSFSSLNLNIALDEMLDP 830
APE+ T+ D +SFGVL E++ G P +D +M+ L + + + L P
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM-ILKAKLGMPQFLSP 251
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ ++E + DFG+A+ + + + T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 208
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 128/313 (40%), Gaps = 62/313 (19%)
Query: 224 KLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG-PIPILRN 282
++ SIP+ N YLNL ENS+ +++L L IL L N R +
Sbjct: 28 EVPASIPV------NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG 81
Query: 283 LTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSIN 342
L SL + L N LT +++F L + L N S + R P L LD
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD---- 137
Query: 343 NITGNVPPEIGHSSQLGVLDLSS-NHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLG 401
+G +L + ++ +V + LG N + P L
Sbjct: 138 ---------LGELKRLEYISEAAFEGLVNLRYLNLGMCNL-------------KDIPNLT 175
Query: 402 SLVQLEHLDLSSNRLSNSIP------KSLGNLELIHLSELDLSRNFLREAIPSQICIMQS 455
+LV+LE L+LS NRL P SL L L+H + RN + ++S
Sbjct: 176 ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDD--------LKS 227
Query: 456 LEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNE-------------LRGSIPNSTTFKD 502
LE+LNLSHN+L L F ++ L + +++N L+ ++P++TT
Sbjct: 228 LEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCC- 286
Query: 503 APIEALQGNKGLY 515
A A G KG Y
Sbjct: 287 ARCHAPAGLKGRY 299
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 207
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 602 NDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+DF+ +G G G V+ +S SG ++A K H L + + + + E++ L E
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 90
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDAL 717
IV YG + I E+ SL D K G + K ++ L
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKKAGRIPEQILGKVSIAVIKGL 144
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+Y+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 145 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 200
Query: 778 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G+ +E+ G++P
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 67/291 (23%), Positives = 120/291 (41%), Gaps = 51/291 (17%)
Query: 603 DFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
DF + IG GG G V+ +K G+ +K+ ++ EVKAL ++ H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-------NEKAEREVKALAKLDHV 64
Query: 662 NIVKVYGFCL-----------------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
NIV Y C + LFI E+ +L + K L
Sbjct: 65 NIVH-YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKV 122
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNW 764
+ + + I + Y+H+ +++RD+ N+ L + + DFG+ LK D
Sbjct: 123 LALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR- 178
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD--FISSMSFSSLNLNI 822
GT Y++PE + ++ D+Y+ G++ E++ H D F +S F+ L I
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFETSKFFTDLRDGI 235
Query: 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLKI 873
+ ++ D + + + KL+S + PE RP ++ + L +
Sbjct: 236 -ISDIFDKK----EKTLLQKLLS----------KKPEDRPNTSEILRTLTV 271
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ ++E + DFG+A+ + + + T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 204
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 610 IGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMT--FQQEFLNEVKALTEIWHRNIVKV 666
+G+G +VY ++ + +I+A+KK E + L E+K L E+ H NI+ +
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 667 YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFP 726
H ++ +V+++ + L VI+ +++ + ++ + L Y+H
Sbjct: 78 LDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQHW-- 132
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 786
I+HRD+ N+LLD ++DFG+AK + + T Y APEL + ++
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYG 191
Query: 787 -KCDVYSFGVLALEVI 801
D+++ G + E++
Sbjct: 192 VGVDMWAVGCILAELL 207
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 198
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 21/242 (8%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
N+F+ +GKG G V + K A+G A+K + L E + L H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 661 RNIVKV-YGFCLHVRHLFIVY-----EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
+ + Y F H R F++ E F S + S D A + G IV
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA-RFYG--------AEIV 261
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL Y+H++ +V+RD+ +N++LD + ++DFG+ K D + GT Y+
Sbjct: 262 SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 319
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
APE+ D + GV+ E++ G+ P + L I ++E+ PR
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLFELILMEEIRFPRTLG 376
Query: 835 PS 836
P
Sbjct: 377 PE 378
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 98
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 155
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 212
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 213 TVDIWSVGCIMAELLTGR 230
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 35/239 (14%)
Query: 609 CIGKGGQGSVYMSKLASG----EIIAVK-------KFHSPLPGEMTFQQEFLNEVKALTE 657
+G+G G V++ K SG ++ A+K K + +M E L E
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--------ERDILVE 83
Query: 658 IWHRNIVKV-YGFCLHVRHLFIVYEYFKMCSLAVILSNDA--AAKNLGWTRRMNMIKGIV 714
+ H IVK+ Y F + L+++ ++ + L LS + +++ + + +
Sbjct: 84 VNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELA 137
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL ++H+ I++RD+ +N+LLD E ++DFG++K GT Y+
Sbjct: 138 LALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 194
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP---RDFISSMSFSSLNLNIALDEMLDP 830
APE+ T+ D +SFGVL E++ G P +D +M+ L + + + L P
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM-ILKAKLGMPQFLSP 252
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 21/242 (8%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
N+F+ +GKG G V + K A+G A+K + L E + L H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 661 RNIVKV-YGFCLHVRHLFIVY-----EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
+ + Y F H R F++ E F S + S D A + G IV
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA-RFYG--------AEIV 258
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL Y+H++ +V+RD+ +N++LD + ++DFG+ K D + GT Y+
Sbjct: 259 SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 316
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
APE+ D + GV+ E++ G+ P + L I ++E+ PR
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLFELILMEEIRFPRTLG 373
Query: 835 PS 836
P
Sbjct: 374 PE 375
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 108
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMN-----MIKGIVDALSYMHND 723
+R I E K L L K L N + I+ L Y+H+
Sbjct: 109 I---IRAPTI--EQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS- 162
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 163 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 10/206 (4%)
Query: 602 NDFDDEHCIGKGGQGSV-YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+DF+ +G G G V + SG I+A K H L + + + + E++ L E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIH--LEIKPAIRNQIIRELQVLHECNS 73
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
IV YG + I E+ SL +L AK + + ++ L+Y+
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYL 130
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
I+HRD+ N+L++ E + DFG++ L +N GT Y+APE
Sbjct: 131 REKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPERLQ 186
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + D++S G+ +E+ G++P
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 92
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + E T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + ++ +A+KK SP + T+ Q L E+K L H NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 93
Query: 669 FCL-----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
++ ++IV + + ++ + + ++ + + I+ L Y+H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 147
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+LL+ + + DFG+A+ PD + E T Y APE+
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 44/226 (19%)
Query: 610 IGKGGQGSVYMSKLASG-------EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
IG+G G V+ ++ A G ++AVK +M Q +F E + E + N
Sbjct: 55 IGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADM--QADFQREAALMAEFDNPN 111
Query: 663 IVKVYGFCLHVRHLFIVYEYFK---------------MCSLA-VILSNDAAAKNLG---- 702
IVK+ G C + + +++EY +CSL+ LS A + G
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 703 -WTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI------AK 755
++ + + + ++Y+ F VHRD++++N L+ ++DFG+ A
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
Query: 756 FLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
+ K D ++ A ++ PE + + T + DV+++GV+ E+
Sbjct: 229 YYKADGND----AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 208
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNAMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 20/216 (9%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQE---FLNEVKALTEI 658
DF+ IG+G G V + KL + + + K + EM + E F E L
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKW--EMLKRAETACFREERDVLVNG 131
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLGWTRRMNMIKGIVDA 716
+ I ++ +L++V +Y+ L +LS D + + M+ I D+
Sbjct: 132 DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI-DS 190
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-GTYGYVA 775
+ +H VHRDI N+L+D ++DFG L D + + +A GT Y++
Sbjct: 191 VHQLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYIS 244
Query: 776 PELAYTM-----KVTEKCDVYSFGVLALEVIKGKHP 806
PE+ M + +CD +S GV E++ G+ P
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 129
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L + +N ++ D L+ H
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 187 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 294
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 295 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 33/236 (13%)
Query: 582 LLSVLTFEGKIIYEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGE 641
++ VL +GK + I TN IG G G V+ +KL + +A+KK
Sbjct: 24 VIKVLASDGKTGEQREIAYTNC----KVIGNGSFGVVFQAKLVESDEVAIKKVLQ----- 74
Query: 642 MTFQQEFLN-EVKALTEIWHRNIVKVYGFCL------HVRHLFIVYEYFKMCSLAVILSN 694
+ F N E++ + + H N+V + F L +V EY V ++
Sbjct: 75 ---DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY---VPETVYRAS 128
Query: 695 DAAAKNLGWTRRMNMIK----GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVS 749
AK L T M +IK ++ +L+Y+H+ I HRDI +N+LLD + +
Sbjct: 129 RHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLI 184
Query: 750 DFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 804
DFG AK L N + + Y Y APEL + T D++S G + E+++G+
Sbjct: 185 DFGSAKILIAGEPNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 128/288 (44%), Gaps = 44/288 (15%)
Query: 236 LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNY 295
L+NLT +N N L+ P +NL KL +L+ +NQ P L NLT+L + L N
Sbjct: 66 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQ 122
Query: 296 LTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLD-FSINNITGNVPPEIGH 354
+T + NL ++LS N SD L++L S N ++ P + +
Sbjct: 123 ITD--IDPLKNLTNLNRLELSSNTI-----SDISALSGLTSLQQLSFGNQVTDLKP-LAN 174
Query: 355 SSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSP---------------- 398
+ L LD+SSN V +I + L KL L+ +NQ+S ++P
Sbjct: 175 LTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQIS-DITPLGILTNLDELSLNGNQ 231
Query: 399 -----KLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIM 453
L SL L LDL++N++SN P S L L+EL L N + P + +
Sbjct: 232 LKDIGTLASLTNLTDLDLANNQISNLAPLS----GLTKLTELKLGANQISNISP--LAGL 285
Query: 454 QSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFK 501
+L L L+ N L + P + L ++ + +N + P S+ K
Sbjct: 286 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 331
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 132/329 (40%), Gaps = 54/329 (16%)
Query: 6 NNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEI 65
NN L D P L+NL L D+ + NN+++ P L NLTNL L + N ++ P +
Sbjct: 76 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 129
Query: 66 GNFRFFSDLELSNNKLS----------------GSIPPSLGNLSNLATL-YLDTNSLSNS 108
N + LELS+N +S G+ L L+NL TL LD +S S
Sbjct: 130 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS 189
Query: 109 IPSEXXXXXXXXXXXXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLS 168
S P LG LTNL L + N L +G + +L +L+
Sbjct: 190 DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLT 245
Query: 169 NLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGS 228
+L L+ N + P L L+ L L L N +S P N+L
Sbjct: 246 DLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNE--NQLEDI 301
Query: 229 IPISMGNLSNLTYLNLFENSLSGAIPY--------------------EYRNLVKLTILLL 268
PIS NL NLTYL L+ N++S P NL + L
Sbjct: 302 SPIS--NLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDVSSLANLTNINWLSA 359
Query: 269 GHNQFRGPIPILRNLTSLERVRLDRNYLT 297
GHNQ P L NLT + ++ L+ T
Sbjct: 360 GHNQISDLTP-LANLTRITQLGLNDQAWT 387
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L + +N ++ D L+ H
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 257
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 128/288 (44%), Gaps = 44/288 (15%)
Query: 236 LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNY 295
L+NLT +N N L+ P +NL KL +L+ +NQ P L NLT+L + L N
Sbjct: 67 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQ 123
Query: 296 LTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLD-FSINNITGNVPPEIGH 354
+T + NL ++LS N SD L++L S N ++ P + +
Sbjct: 124 ITD--IDPLKNLTNLNRLELSSNTI-----SDISALSGLTSLQQLSFGNQVTDLKP-LAN 175
Query: 355 SSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSP---------------- 398
+ L LD+SSN V +I + L KL L+ +NQ+S ++P
Sbjct: 176 LTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQIS-DITPLGILTNLDELSLNGNQ 232
Query: 399 -----KLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIM 453
L SL L LDL++N++SN P S L L+EL L N + P + +
Sbjct: 233 LKDIGTLASLTNLTDLDLANNQISNLAPLS----GLTKLTELKLGANQISNISP--LAGL 286
Query: 454 QSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFK 501
+L L L+ N L + P + L ++ + +N + P S+ K
Sbjct: 287 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 332
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 132/329 (40%), Gaps = 54/329 (16%)
Query: 6 NNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEI 65
NN L D P L+NL L D+ + NN+++ P L NLTNL L + N ++ P +
Sbjct: 77 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 130
Query: 66 GNFRFFSDLELSNNKLS----------------GSIPPSLGNLSNLATL-YLDTNSLSNS 108
N + LELS+N +S G+ L L+NL TL LD +S S
Sbjct: 131 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS 190
Query: 109 IPSEXXXXXXXXXXXXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLS 168
S P LG LTNL L + N L +G + +L +L+
Sbjct: 191 DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLT 246
Query: 169 NLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGS 228
+L L+ N + P L L+ L L L N +S P N+L
Sbjct: 247 DLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNE--NQLEDI 302
Query: 229 IPISMGNLSNLTYLNLFENSLSGAIPY--------------------EYRNLVKLTILLL 268
PIS NL NLTYL L+ N++S P NL + L
Sbjct: 303 SPIS--NLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSA 360
Query: 269 GHNQFRGPIPILRNLTSLERVRLDRNYLT 297
GHNQ P L NLT + ++ L+ T
Sbjct: 361 GHNQISDLTP-LANLTRITQLGLNDQAWT 388
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 63
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 121
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 178
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 207
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 115/281 (40%), Gaps = 33/281 (11%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSND----AAAKNL--GWTRRMNMIKGIVD 715
+V + G C L ++ E+ K +L+ L + K+L + ++I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTELAGTYGY 773
M +HRD++++N+LL +N + DFG+A+ + PD + +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRL 832
+APE + T + DV+SFGVL E+ G P + +DE RL
Sbjct: 213 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKIDEEFXRRL 260
Query: 833 PTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
+R + + + + C P RPT ++ + L
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 128/313 (40%), Gaps = 62/313 (19%)
Query: 224 KLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG-PIPILRN 282
++ SIP+ N YLNL ENS+ +++L L IL L N R +
Sbjct: 28 EVPASIPV------NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG 81
Query: 283 LTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSIN 342
L SL + L N LT +++F L + L N S + R P L LD
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD---- 137
Query: 343 NITGNVPPEIGHSSQLGVLDLSS-NHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLG 401
+G +L + ++ +V + LG N + P L
Sbjct: 138 ---------LGELKRLEYISEAAFEGLVNLRYLNLGMCNL-------------KDIPNLT 175
Query: 402 SLVQLEHLDLSSNRLSNSIP------KSLGNLELIHLSELDLSRNFLREAIPSQICIMQS 455
+LV+LE L+LS NRL P SL L L+H + RN + ++S
Sbjct: 176 ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDD--------LKS 227
Query: 456 LEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNE-------------LRGSIPNSTTFKD 502
LE+LNLSHN+L L F ++ L + +++N L+ ++P++TT
Sbjct: 228 LEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCC- 286
Query: 503 APIEALQGNKGLY 515
A A G KG Y
Sbjct: 287 ARCHAPAGLKGRY 299
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 101/216 (46%), Gaps = 19/216 (8%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALT 656
+ +++ F +G G +VY +G +A+K+ L E + E+ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK--LDSEEGTPSTAIREISLMK 58
Query: 657 EIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR---MNMIK-- 711
E+ H NIV++Y L +V+E+ + L ++ +G T R +N++K
Sbjct: 59 ELKHENIVRLYDVIHTENKLTLVFEF-----MDNDLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 712 --GIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG 769
++ L++ H + I+HRD+ +N+L++ + + DFG+A+ + ++
Sbjct: 114 QWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV 170
Query: 770 TYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGK 804
T Y AP+ L + + D++S G + E+I GK
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWMHYNQ 198
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 604 FDDEHC-----IGKGGQGSVYMSKL-----ASGEIIAVKKFHSPLPGEMTFQQEFLNEVK 653
F++ H +GKG GSV + + +G ++AVK+ P + Q++F E++
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQ 60
Query: 654 ALTEIWHRNIVKVYG--FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK 711
L + IVK G + L +V EY L L A L +R +
Sbjct: 61 ILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSS 118
Query: 712 GIVDALSYM-HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT 770
I + Y+ C VHRD++++N+L++ E ++DFG+AK L D
Sbjct: 119 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPG 174
Query: 771 YG---YVAPELAYTMKVTEKCDVYSFGVLALEV 800
+ APE + + DV+SFGV+ E+
Sbjct: 175 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ + + +A + + + ++ L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 156
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 213
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 214 TVDIWSVGCIMAELLTGR 231
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.8 bits (133), Expect = 9e-08, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L + +N ++ D L+ H
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR---SKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 248
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G+V+ +K + EI+A+K+ E L E+ L E+ H+NIV+++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHD 68
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ L +V+E+ C + D+ +L + + ++ L + H+ +
Sbjct: 69 VLHSDKKLTLVFEF---CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NV 122
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV-TEK 787
+HRD+ +N+L++ E ++DFG+A+ ++ T Y P++ + K+ +
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 788 CDVYSFGVLALEVIKGKHP 806
D++S G + E+ P
Sbjct: 183 IDMWSAGCIFAELANAARP 201
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 25/219 (11%)
Query: 595 EEIIRATNDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVK 653
EE+ AT+ +G+G G V+ M +G AVKK + F+ E L
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-----FRAEELMACA 121
Query: 654 ALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGI 713
LT IV +YG + I E + SL ++ L R + +
Sbjct: 122 GLTSP---RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC---LPEDRALYYLGQA 175
Query: 714 VDALSYMHNDCFPPIVHRDISSKNVLLDFE-NEAHVSDFGIAKFLKPDSSNWTELAGTY- 771
++ L Y+H+ I+H D+ + NVLL + + A + DFG A L+PD L G Y
Sbjct: 176 LEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYI 232
Query: 772 ----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
++APE+ K DV+S + L ++ G HP
Sbjct: 233 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 214
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 215 TVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 222
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 223 TVDIWSVGCIMAELLTGR 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 27/275 (9%)
Query: 595 EEIIRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVK---KFHSPLPGEMTFQQEFLN 650
+E+ +DF+ IG+G V + K+ +G++ A+K K+ GE++ F
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSC---FRE 110
Query: 651 EVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMI 710
E L R I +++ +L++V EY+ L +LS + + +
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK--FGERIPAEMARFYL 168
Query: 711 KGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-G 769
IV A+ +H + VHRDI N+LLD ++DFG L+ D + + +A G
Sbjct: 169 AEIVMAIDSVHRLGY---VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVG 225
Query: 770 TYGYVAPELAYTMKVTE-------KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNI 822
T Y++PE+ + +CD ++ GV A E+ G+ P F + + + +
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP--FYADSTAETYGKIV 283
Query: 823 ALDE-----MLDPRLPTPSRNVHDKLISIVEVTIS 852
E ++D +P +R+ +L+ E +
Sbjct: 284 HYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLG 318
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 164
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 221
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 222 TVDIWSVGCIMAELLTGR 239
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 214
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 215 TVDIWSVGCIMAELLTGR 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 207
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 168
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 225
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 226 TVDIWSVGCIMAELLTGR 243
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 214
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 215 TVDIWSVGCIMAELLTGR 232
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L + +N ++ D L+ H
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 257
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E ++++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKLNHQ 108
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 276
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 277 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 305
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 204
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 142
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 199
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 200 TVDIWSVGCIMAELLTGR 217
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L + +N ++ D L+ H
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR---SKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 248
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 204
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 204
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 50/223 (22%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IGKG G V+M K GE +AVK F + E ++ +E E+ + H NI+ GF
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTT--EEASWFRE--TEIYQTVLMRHENIL---GF 96
Query: 670 CL-------HVRHLFIVYEYFKMCSLAVIL-SNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
L+++ +Y + SL L S AK++ + + V L ++H
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLH 151
Query: 722 NDCF-----PPIVHRDISSKNVLLDFENEAHVSDFGIA-KFLKPDSSNWTEL-----AGT 770
+ F P I HRD+ SKN+L+ ++D G+A KF+ +N ++ GT
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI--SDTNEVDIPPNTRVGT 209
Query: 771 YGYVAPEL-----------AYTMKVTEKCDVYSFGVLALEVIK 802
Y+ PE+ +Y M D+YSFG++ EV +
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIM-----ADMYSFGLILWEVAR 247
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 93
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L + + + + ++ K D L+ H
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS-KRNEFVPYKTPEDLYK---DFLTLEH 149
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAKFL--KPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 257
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 122/288 (42%), Gaps = 30/288 (10%)
Query: 237 SNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERV-RLDRNY 295
SN+T LNL N L P + +L IL G N P L + L +V L N
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNE 84
Query: 296 LTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITG--------- 346
L+ ++F NLT +DL N+ + S+ + L LD S N ++
Sbjct: 85 LSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQL 144
Query: 347 -----------------NVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAH 389
+ E +S L LDLSSN + P + L+L +
Sbjct: 145 ENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNN 204
Query: 390 NQLSGQLSPKLG---SLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAI 446
QL+ L+ KL S +++L L++N+L + + L+ +L++LDLS N L +
Sbjct: 205 AQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVG 264
Query: 447 PSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSI 494
+ SL L+L +N++ L P F ++ L ++ + + S+
Sbjct: 265 NGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSV 312
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 367 HIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGN 426
HI ++P + LN L HNQL QL LD N +S P+
Sbjct: 18 HIPDDLPSNITVLN------LTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQI 71
Query: 427 LELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDIS 486
L L+ + L+L N L + +L +L+L NS+ + + F+ L+ +D+S
Sbjct: 72 LPLLKV--LNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLS 129
Query: 487 YNELRGS 493
+N L +
Sbjct: 130 HNGLSST 136
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 44/280 (15%)
Query: 233 MGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPI-----LRNLTSLE 287
+GN S+L L+L N L P ++ + KL LLL + Q + L N TS++
Sbjct: 168 LGN-SSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSN-TSIQ 225
Query: 288 RVRLDRNYLTGNISESF--YIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNIT 345
+ L N L +F + NLT +DLS NN + + + P L L NNI
Sbjct: 226 NLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQ 285
Query: 346 GNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGS--- 402
P S L L L K +S P +
Sbjct: 286 RLSPRSFYGLSNLRYLSL--------------------KRAFTKQSVSLASHPNIDDFSF 325
Query: 403 --LVQLEHLDLSSNRLSNSIPKSLGNL--ELIHLSELDLSRNFLR-EAIPSQICIMQS-- 455
L LE+L++ N +IP + N L+ L L LS+ F + + ++ + +
Sbjct: 326 QWLKYLEYLNMDDN----NIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHS 381
Query: 456 -LEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSI 494
L LNL+ N +S + F + L +D+ NE+ +
Sbjct: 382 PLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKL 421
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV---ATRWYRAPEIMLNWMHYNQ 209
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 156
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 213
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 214 TVDIWSVGCIMAELLTGR 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+ K E + E+ L E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 781 TMK-VTEKCDVYSFGVLALEVIKGK 804
K + D++S G + E++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+ K E + E+ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ +T T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 781 TMK-VTEKCDVYSFGVLALEVIKGK 804
K + D++S G + E++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV---K 665
+G G GSV + SGE +A+KK P E+ F + E+ L + H N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENVIGLLD 90
Query: 666 VYGFCLHVRHLFIVYEY--FKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
V+ +R+ + Y F L I+ + + + + ++ ++ L Y+H+
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHSA 145
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-M 782
+VHRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ + M
Sbjct: 146 G---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV---VTRWYRAPEVILSWM 199
Query: 783 KVTEKCDVYSFGVLALEVIKGK 804
+ D++S G + E++ GK
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 209
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 207
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 13/203 (6%)
Query: 610 IGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G G V + K +G +AVK + + + E++ L H +I+K+Y
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKN--LGWTRRMNMIKGIVDALSYMHNDCFP 726
+F+V EY L D KN L + + I+ + Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELF-----DYICKNGRLDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 727 PIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVT 785
+VHRD+ +NVLLD A ++DFG++ + D G+ Y APE ++ +
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYAG 194
Query: 786 EKCDVYSFGVLALEVIKGKHPRD 808
+ D++S GV+ ++ G P D
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFD 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 87
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 144
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 201
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 202 TVDIWSVGCIMAELLTGR 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 120/304 (39%), Gaps = 64/304 (21%)
Query: 603 DFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR 661
DF + IG GG G V+ +K G+ +++ ++ EVKAL ++ H
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYN-------NEKAEREVKALAKLDHV 65
Query: 662 NIVKVYGFCL------------------------------HVRHLFIVYEYFKMCSLAVI 691
NIV Y C + LFI E+ +L
Sbjct: 66 NIVH-YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 692 LSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDF 751
+ K L + + + I + Y+H+ ++HRD+ N+ L + + DF
Sbjct: 125 IEKRRGEK-LDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 752 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD--F 809
G+ LK D T GT Y++PE + ++ D+Y+ G++ E++ H D F
Sbjct: 181 GLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAF 236
Query: 810 ISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869
+S F+ L I D + D + T + KL+S + PE RP ++ +
Sbjct: 237 ETSKFFTDLRDGIISD-IFDKKEKT----LLQKLLS----------KKPEDRPNTSEILR 281
Query: 870 LLKI 873
L +
Sbjct: 282 TLTV 285
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 60
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 208
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV---ATRWYRAPEIMLNWMHYNQ 209
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N ++ L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ ++E + DFG+ + + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V + +A+KK SP + T+ Q L E++ L H N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKI-SPFEHQ-TYCQRTLREIQILLRFRHENVIGIRD 108
Query: 669 FCLH-----VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
+R ++IV + + ++ S + ++ + + I+ L Y+H+
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGLKYIHS- 162
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAY 780
++HRD+ N+L++ + + DFG+A+ P+ + TE T Y APE+
Sbjct: 163 --ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 781 TMK-VTEKCDVYSFGVLALE------VIKGKH 805
K T+ D++S G + E + GKH
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 86
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 143
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 200
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 201 TVDIWSVGCIMAELLTGR 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 198
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 120 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 142
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 199
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 200 TVDIWSVGCIMAELLTGR 217
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV---ATRWYRAPEIMLNWMHYNQ 209
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E ++++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKLNHQ 94
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 209
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 262
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 263 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 291
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N L +I I+ L Y+H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 198
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+F IG+G G VY ++ +GE++A+KK E + E+ L E+ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 62
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
NIVK+ L++V+E+ L + + +A + + + ++ L++
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 121 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 781 TMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 28/268 (10%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQ---QEFLNEVKALTEIWHRNIVKV 666
+G+G GSV L + ++K + + + Q +EFL+E + + H N++++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 667 YGFCLH-----VRHLFIVYEYFKMCSLAVIL---SNDAAAKNLGWTRRMNMIKGIVDALS 718
G C+ + ++ + K L L + K++ + + I +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIA-KFLKPDSSNWTELAGT-YGYVAP 776
Y+ N F +HRD++++N +L + V+DFG++ K D +A ++A
Sbjct: 162 YLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 777 ELAYTMKVTEKCDVYSFGVLALEV-IKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP 835
E T K DV++FGV E+ +G P + + L+ RL P
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH-------GHRLKQP 271
Query: 836 SRNVHDKLISIVEVTISCVDENPESRPT 863
D L + E+ SC +P RPT
Sbjct: 272 ----EDCLDELYEIMYSCWRTDPLDRPT 295
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 168
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + T Y APE+ M +
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV---ATRWYRAPEIMLNWMHYNQ 225
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 226 TVDIWSVGCIMAELLTGR 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L + +N ++ D L+ H
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAKFL--KPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 248
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 208
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 134
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + + + G
Sbjct: 195 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLP 249
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 302
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 303 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 331
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ T T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGXVATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 610 IGKGGQGSV---YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
+G G GSV Y ++L + +AVKK P + ++ + E++ L + H N++ +
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 667 YGFCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCF 725
+ E + + +L L+N ++ L ++ ++ L Y+H+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG- 151
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKV 784
I+HRD+ NV ++ ++E + DFG+A+ + + + T Y APE+ M
Sbjct: 152 --IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV---ATRWYRAPEIMLNWMHY 206
Query: 785 TEKCDVYSFGVLALEVIKGK 804
+ D++S G + E+++GK
Sbjct: 207 NQTVDIWSVGCIMAELLQGK 226
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L + +N ++ D L+ H
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR---SKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAKFL--KPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 248
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 100
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 161 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 215
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 268
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 269 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 297
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 32/271 (11%)
Query: 607 EHCIGKGGQGSVYMSKL---ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+ IGKG G VY + A I K S + EM + FL E + + H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNV 84
Query: 664 VKVYGFCLH---VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
+ + G L + H+ + Y MC ++ + +N ++ + + Y+
Sbjct: 85 LALIGIMLPPEGLPHVLLPY----MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140
Query: 721 HNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG-----YVA 775
F VHRD++++N +LD V+DFG+A+ + D ++ + + A
Sbjct: 141 AEQKF---VHRDLAARNCMLDESFTVKVADFGLARDIL-DREYYSVQQHRHARLPVKWTA 196
Query: 776 PELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
E T + T K DV+SFGVL E++ +G P I + RLP
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ-------GRRLPQ 249
Query: 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQ 865
P S+ +V C + +P RPT +
Sbjct: 250 PEYCPD----SLYQVMQQCWEADPAVRPTFR 276
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 85
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS----NDAAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 146 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 200
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 253
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 254 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 282
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L + +N ++ D L+ H
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAKFL--KPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 257
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 8/207 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 59
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 118 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 779 AYTMK-VTEKCDVYSFGVLALEVIKGK 804
K + D++S G + E++ +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 600 ATNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
+ +F IG+G G VY ++ +GE++A+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS 718
H NIVK+ L++V+E+ L + + +A + + + ++ L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 719 YMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
+ H+ ++HRD+ +N+L++ E ++DFG+A+ + T Y APE+
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 779 AYTMK-VTEKCDVYSFGVLALEVI 801
K + D++S G + E++
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 108
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 276
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 277 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 305
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 110
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 171 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 225
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 278
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 279 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 307
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 24/220 (10%)
Query: 600 ATNDFDDEHCIGKGGQGSV-YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
D D IG+G GSV M SG+I+AVK+ S + E +Q ++ +
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSS 78
Query: 659 WHRNIVKVYGFCLHVRHLFIVYE--------YFKMCSLAVILSNDAAAKNLGWTRRMNMI 710
IV+ YG +I E ++K + +L + + LG +
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKY--VYSVLDDVIPEEILG-----KIT 131
Query: 711 KGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT 770
V AL+++ + I+HRDI N+LLD + DFGI+ L DS T AG
Sbjct: 132 LATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGC 188
Query: 771 YGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE A + DV+S G+ E+ G+ P
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 111
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + + + G
Sbjct: 172 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLP 226
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 279
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 280 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 308
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTE 786
+HRD++++N+LL + DFG+A+ +K DS+ + ++APE + T
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 787 KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP--RLPTPSRNVHDKLI 844
+ DV+S+G+ E+ + S + + ++ +M+ R+ +P +
Sbjct: 250 ESDVWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE--- 299
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLLK 872
+ ++ +C D +P RPT +++ QL++
Sbjct: 300 -MYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 56/284 (19%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI----- 663
+G+G G V + + SG+I AVK+ + + + Q+ L ++ +I R +
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQE--QKRLLXDL----DISXRTVDCPFT 95
Query: 664 VKVYGFCLHVRHLFIVYE---------YFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
V YG ++I E Y ++ + D K + IV
Sbjct: 96 VTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGK---------IAVSIV 146
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL ++H+ ++HRD+ NVL++ + DFGI+ +L D + + AG Y
Sbjct: 147 KALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-AGCKPYX 203
Query: 775 APEL--------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826
APE Y++ K D++S G+ +E+ + P D + F L + E
Sbjct: 204 APERINPELNQKGYSV----KSDIWSLGITXIELAILRFPYDSWGT-PFQQLKQVV---E 255
Query: 827 MLDPRLPTPSRNVHDKL-ISIVEVTISCVDENPESRPTMQKVCQ 869
P+LP DK V+ T C+ +N + RPT ++ Q
Sbjct: 256 EPSPQLPA------DKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVYSEQDELDFLMEALIISKFNHQ 108
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 276
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 277 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 305
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 38/264 (14%)
Query: 629 IAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIVYEYFKMCS 687
+AVK S + ++ ++E+K ++ + H NIV + G C H + ++ EY
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 688 LAVILSNDAA-------------AKNLGWTRRMNMIKGIVDALSYMHN-DCFPPIVHRDI 733
L L + L ++ + ++++ + +C +HRD+
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDV 192
Query: 734 SSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTEKCDVY 791
+++NVLL + A + DFG+A+ + DS+ + ++APE + T + DV+
Sbjct: 193 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 252
Query: 792 SFGVLALEVIK---GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVE 848
S+G+L E+ +P ++S + + +M P P +I
Sbjct: 253 SYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY---QMAQPAF-APK--------NIYS 300
Query: 849 VTISCVDENPESRPTMQKVCQLLK 872
+ +C P RPT Q++C L+
Sbjct: 301 IMQACWALEPTHRPTFQQICSFLQ 324
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DFG+A+ + T Y APE+ M +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---XVATRWYRAPEIMLNWMHYNQ 222
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 223 TVDIWSVGCIMAELLTGR 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 209
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 262
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 263 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 291
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
+E + E + + ++ + IV++ G C L +V E L L + + +
Sbjct: 55 EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSN 111
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT 765
++ + + Y+ F VHRD++++NVLL + A +SDFG++K L D S +T
Sbjct: 112 VAELLHQVSMGMKYLEEKNF---VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168
Query: 766 -ELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
AG + + APE K + + DV+S+GV E + G+ P
Sbjct: 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 102/218 (46%), Gaps = 33/218 (15%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHS-----PLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G +V+ + +G++ A+K F++ P+ +M E + L ++ H+NI
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM-------REFEVLKKLNHKNI 69
Query: 664 VKVYGFCLH--VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
VK++ RH ++ E+ SL +L + A L + + +++ +V ++++
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 722 NDCFPPIVHRDISSKNVLL----DFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+ IVHR+I N++ D ++ ++DFG A+ L+ D + L GT Y+ P+
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPD 185
Query: 778 LAYTMKVTEK---------CDVYSFGVLALEVIKGKHP 806
+ Y V K D++S GV G P
Sbjct: 186 M-YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 120
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS----NDAAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 181 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 235
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 288
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 289 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 317
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHS-----PLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G +V+ + +G++ A+K F++ P+ +M E + L ++ H+NI
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM-------REFEVLKKLNHKNI 69
Query: 664 VKVYGFCLH--VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
VK++ RH ++ E+ SL +L + A L + + +++ +V ++++
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 722 NDCFPPIVHRDISSKNVLL----DFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 777
+ IVHR+I N++ D ++ ++DFG A+ L+ D + L GT Y+ P+
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPD 185
Query: 778 L--------AYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + K D++S GV G P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 43/288 (14%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 94
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
+V + G C L ++ E+ K +L+ L + +N + D L+ H
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 722 NDCFP-------------PIVHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTE 766
C+ +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALD 825
++APE + T + DV+SFGVL E+ G P + +D
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKID 259
Query: 826 EMLDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
E RL +R + + + + C P RPT ++ + L
Sbjct: 260 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 32/232 (13%)
Query: 594 YEEIIRA-------TNDFDDEHCIGKGGQGSVYMSK-LASGEIIAVK---KFHSPLPGEM 642
YE+I++ D+D IG+G G V + + AS ++ A+K KF +
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 643 TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN-DAAAKNL 701
F E + + W +V+++ ++L++V EY L ++SN D K
Sbjct: 120 AFFWEERDIMAFANSPW---VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK-- 174
Query: 702 GWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS 761
W + +V AL +H+ ++HRD+ N+LLD ++DFG +K D
Sbjct: 175 -WAKFYTA--EVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDE 226
Query: 762 SNWTEL---AGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHP 806
+ GT Y++PE+ + +CD +S GV E++ G P
Sbjct: 227 TGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS----NDAAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 154 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 208
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 261
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 262 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 290
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 610 IGKGGQGSV---YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
+G G GSV Y ++L + +AVKK P + ++ + E++ L + H N++ +
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 667 YGFCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCF 725
+ E + + +L L+N + L ++ ++ L Y+H+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG- 151
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKV 784
I+HRD+ NV ++ ++E + DFG+A+ + + + T Y APE+ M
Sbjct: 152 --IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV---ATRWYRAPEIMLNWMHY 206
Query: 785 TEKCDVYSFGVLALEVIKGK 804
+ D++S G + E+++GK
Sbjct: 207 NQTVDIWSVGCIMAELLQGK 226
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS----NDAAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 154 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 208
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 261
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 262 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 290
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 610 IGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQE--FLNEVKALTEIWHR 661
+G G G VY +++ S +AVK LP + Q E FL E +++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDAL 717
NIV+ G L FI+ E L L + +L +++ + I
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 718 SYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGT---- 770
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY--RASYYRKGGCAMLP 209
Query: 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830
++ PE T K D +SFGVL E+ + M + S + L+ +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQEVLEFVTSG 262
Query: 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P +N + I+ C PE RP
Sbjct: 263 GRMDPPKNCPGPVYRIM---TQCWQHQPEDRP 291
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 611 GKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV---- 666
+G G V+ ++L + + +AVK F PL + ++Q E E+ + + H N+++
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIF--PLQDKQSWQSE--REIFSTPGMKHENLLQFIAAE 78
Query: 667 -YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND-- 723
G L V L+++ + SL L + + W ++ + + LSY+H D
Sbjct: 79 KRGSNLEVE-LWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVP 133
Query: 724 -CF-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGTYGYVA 775
C P I HRD SKNVLL + A ++DFG+A +P + GT Y+A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 776 PE-----LAYTMKVTEKCDVYSFGVLALEVI 801
PE + + + D+Y+ G++ E++
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + D+G+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTE 786
+HRD++++N+LL + DFG+A+ +K DS+ + ++APE + T
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 226
Query: 787 KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP--RLPTPSRNVHDKLI 844
+ DV+S+G+ E+ + S + + ++ +M+ R+ +P +
Sbjct: 227 ESDVWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE--- 276
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLLK 872
+ ++ +C D +P RPT +++ QL++
Sbjct: 277 -MYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTE 786
+HRD++++N+LL + DFG+A+ +K DS+ + ++APE + T
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 787 KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP--RLPTPSRNVHDKLI 844
+ DV+S+G+ E+ + S + + ++ +M+ R+ +P +
Sbjct: 250 ESDVWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE--- 299
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLLK 872
+ ++ +C D +P RPT +++ QL++
Sbjct: 300 -MYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTE 786
+HRD++++N+LL + DFG+A+ +K DS+ + ++APE + T
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 244
Query: 787 KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP--RLPTPSRNVHDKLI 844
+ DV+S+G+ E+ + S + + ++ +M+ R+ +P +
Sbjct: 245 ESDVWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE--- 294
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLLK 872
+ ++ +C D +P RPT +++ QL++
Sbjct: 295 -MYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 39/241 (16%)
Query: 610 IGKGGQGSVYMSKLASG----EIIAVKKFHSPLPGEMTFQQEFLNEVKA----LTEIWHR 661
+GKGG G V+ + +G +I A+K + + + KA L E+ H
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAM---IVRNAKDTAHTKAERNILEEVKHP 81
Query: 662 NIVK-VYGFCLHVRHLFIVYEY------FKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
IV +Y F + L+++ EY F I D A L I
Sbjct: 82 FIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFMEDTACFYLA---------EIS 131
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL ++H I++RD+ +N++L+ + ++DFG+ K D + GT Y+
Sbjct: 132 MALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYM 188
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
APE+ D +S G L +++ G P F+ N +D++L +L
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPP--------FTGENRKKTIDKILKCKLNL 240
Query: 835 P 835
P
Sbjct: 241 P 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 39/241 (16%)
Query: 610 IGKGGQGSVYMSKLASG----EIIAVKKFHSPLPGEMTFQQEFLNEVKA----LTEIWHR 661
+GKGG G V+ + +G +I A+K + + + KA L E+ H
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAM---IVRNAKDTAHTKAERNILEEVKHP 81
Query: 662 NIVK-VYGFCLHVRHLFIVYEY------FKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
IV +Y F + L+++ EY F I D A L I
Sbjct: 82 FIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFMEDTACFYLA---------EIS 131
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 774
AL ++H I++RD+ +N++L+ + ++DFG+ K D + GT Y+
Sbjct: 132 MALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYM 188
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
APE+ D +S G L +++ G P F+ N +D++L +L
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPP--------FTGENRKKTIDKILKCKLNL 240
Query: 835 P 835
P
Sbjct: 241 P 241
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTE 786
+HRD++++N+LL + DFG+A+ +K DS+ + ++APE + T
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 242
Query: 787 KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP--RLPTPSRNVHDKLI 844
+ DV+S+G+ E+ + S + + ++ +M+ R+ +P +
Sbjct: 243 ESDVWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE--- 292
Query: 845 SIVEVTISCVDENPESRPTMQKVCQLLK 872
+ ++ +C D +P RPT +++ QL++
Sbjct: 293 -MYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K + WT L GT
Sbjct: 171 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPE 224
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 142/340 (41%), Gaps = 45/340 (13%)
Query: 555 LIGLFFKFQRRKNDSQTQQSSPGNSRGLLSV--LTFEGKIIY--EEIIRATNDFDDEHCI 610
L+ + + F R++N+S+ GN SV F +Y +E A +
Sbjct: 1 LVIMLYVFHRKRNNSRL-----GNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSREL 55
Query: 611 GKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
G+G G VY +A G + +A+K + M + EFLNE + E ++
Sbjct: 56 GQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHHV 112
Query: 664 VKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVDA 716
V++ G + ++ E + SL + N+ ++ + M I D
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----YG 772
++Y++ + F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 173 MAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 227
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832
+++PE T DV+SFGV+ E+ ++ + L+ L +++ L
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGGL 280
Query: 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N D L ++ + C NP+ RP+ ++ +K
Sbjct: 281 LDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 317
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
ND + IG+G G V +++ + A+K+ + ++F E++ L ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKL 72
Query: 659 WHR-NIVKVYGFCLHVRHLFIVYEYFKMCSL------AVILSNDAA-------AKNLGWT 704
H NI+ + G C H +L++ EY +L + +L D A A L
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNW 764
+ ++ + + Y+ F +HRD++++N+L+ A ++DFG+++
Sbjct: 133 QLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR------GQE 183
Query: 765 TELAGTYG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSS 817
+ T G ++A E L Y++ T DV+S+GVL E++ G P M+ +
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTP---YCGMTCAE 239
Query: 818 LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
L + L+ L N D++ ++ C E P RP+ ++
Sbjct: 240 LYEKLPQGYRLEKPL-----NCDDEVYDLMR---QCWREKPYERPSFAQI 281
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
ND + IG+G G V +++ + A+K+ + ++F E++ L ++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKL 82
Query: 659 WHR-NIVKVYGFCLHVRHLFIVYEYFKMCSL------AVILSNDAA-------AKNLGWT 704
H NI+ + G C H +L++ EY +L + +L D A A L
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNW 764
+ ++ + + Y+ F +HRD++++N+L+ A ++DFG+++
Sbjct: 143 QLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR------GQE 193
Query: 765 TELAGTYG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSS 817
+ T G ++A E L Y++ T DV+S+GVL E++ G P M+ +
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTP---YCGMTCAE 249
Query: 818 LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
L + L+ L N D++ ++ C E P RP+ ++
Sbjct: 250 LYEKLPQGYRLEKPL-----NCDDEVYDLMR---QCWREKPYERPSFAQI 291
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEII-AVKKFHSPLPGEMTFQQEFLNEVKALTE-IW 659
+DF IGKG G V +++ + E+ AVK + ++ ++E L + +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H +V ++ L+ V +Y L L + + R I AL Y
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGY 154
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 779
+H+ IV+RD+ +N+LLD + ++DFG+ K +S + GT Y+APE+
Sbjct: 155 LHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 780 YTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ D + G + E++ G P
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
I++RD+ NV+LD E ++DFG+ K D GT Y+APE+ +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 788 CDVYSFGVLALEVIKGKHP 806
D ++FGVL E++ G+ P
Sbjct: 202 VDWWAFGVLLYEMLAGQAP 220
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
I++RD+ NV+LD E ++DFG+ K D GT Y+APE+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 788 CDVYSFGVLALEVIKGKHP 806
D ++FGVL E++ G+ P
Sbjct: 523 VDWWAFGVLLYEMLAGQAP 541
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 115/286 (40%), Gaps = 41/286 (14%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR-N 662
+G+G G V + K A+ +AVK + + ++E+K L I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 94
Query: 663 IVKVYGFCLHVRH-LFIVYEYFKMCSLAVILSN-----------DAAAKNLGWTRRMNMI 710
+V + G C L ++ E+ K +L+ L + D L +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 711 KGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL--KPDSSNWTELA 768
+ + ++ + +HRD++++N+LL +N + DFG+A+ + PD +
Sbjct: 155 FQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 769 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEM 827
++APE + T + DV+SFGVL E+ G P + +DE
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------------GVKIDEE 259
Query: 828 LDPRLPTPSRNVHDKLIS--IVEVTISCVDENPESRPTMQKVCQLL 871
RL +R + + + + C P RPT ++ + L
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIV---K 665
+G G GSV S + SG IAVKK P + ++ + E++ L + H N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCF 725
V+ + VY + + L+N + L +I I+ L Y+H+
Sbjct: 118 VFTPATSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 172
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKV 784
I+HRD+ N+ ++ + E + DFG+A+ + + + T Y APE+ M
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 229
Query: 785 TEKCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 230 NMTVDIWSVGCIMAELLTGR 249
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G+V+ +K + EI+A+K+ E L E+ L E+ H+NIV+++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHD 68
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ L +V+E+ C + D+ +L + + ++ L + H+ +
Sbjct: 69 VLHSDKKLTLVFEF---CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NV 122
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV-TEK 787
+HRD+ +N+L++ E +++FG+A+ ++ T Y P++ + K+ +
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 788 CDVYSFGVLALEVIKGKHP 806
D++S G + E+ P
Sbjct: 183 IDMWSAGCIFAELANAGRP 201
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 1/176 (0%)
Query: 28 LGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNN-KLSGSIP 86
L N++S S + NL L++H+N+L+G L+LS+N +L P
Sbjct: 38 LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 87 PSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXXXXXXXXXXPHSLGNLTNLATL 146
+ L +L TL+LD L P ++ +L NL L
Sbjct: 98 TTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHL 157
Query: 147 YIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLS 202
+++ N + + L SL L L +N+ P + +L L TLYL N+LS
Sbjct: 158 FLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS 213
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 73/185 (39%), Gaps = 2/185 (1%)
Query: 136 SLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSEN-NFNGSIPPSLGNLSNLATL 194
S + NL L+++SN+L+ L L L LS+N P + L +L TL
Sbjct: 50 SFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTL 109
Query: 195 YLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIP 254
+LD L P N L + +L NLT+L L N +
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPE 169
Query: 255 YEYRNLVKLTILLLGHNQFRGPIP-ILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYI 313
+ +R L L LLL N P R+L L + L N L+ +E +L Y+
Sbjct: 170 HAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYL 229
Query: 314 DLSQN 318
L+ N
Sbjct: 230 RLNDN 234
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 1/173 (0%)
Query: 4 IYNNSLYDSIPSELRNLKSLSDLELGNN-KLSGSIPHSLGNLTNLATLYIHTNSLSGSIP 62
+++N+L + L L L+L +N +L P + L +L TL++ L P
Sbjct: 62 LHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGP 121
Query: 63 GEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXX 122
G L L +N L + +L NL L+L N + +
Sbjct: 122 GLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRL 181
Query: 123 XXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSEN 175
PH+ +L L TLY+++N+LS + L+SL L+L++N
Sbjct: 182 LLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 37.7 bits (86), Expect = 0.027, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 385 LVLAHNQLSGQLSPKLGSLVQLEHLDLSSN-RLSNSIPKSLGNLELIHLSELDLSRNFLR 443
L L N L+G + L LE LDLS N +L P + L HL L L R L+
Sbjct: 60 LWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLG--HLHTLHLDRCGLQ 117
Query: 444 EAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIP 495
E P + +L+ L L N+L L + F + L H+ + N + S+P
Sbjct: 118 ELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIP-SVP 168
Score = 33.9 bits (76), Expect = 0.43, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 71/194 (36%), Gaps = 2/194 (1%)
Query: 223 NKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHN-QFRGPIP-IL 280
N++S S + NLT L L N+L+G + L L L L N Q R P
Sbjct: 41 NRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTF 100
Query: 281 RNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFS 340
R L L + LDR L F L Y+ L NN + + L+ L
Sbjct: 101 RGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLH 160
Query: 341 INNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKL 400
N I L L L NH+ P L + L L N LS + L
Sbjct: 161 GNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVL 220
Query: 401 GSLVQLEHLDLSSN 414
L L++L L+ N
Sbjct: 221 VPLRSLQYLRLNDN 234
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 121/281 (43%), Gaps = 36/281 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 33 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 89
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL ++N+ ++ + M I D
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----Y 771
++Y++ + F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 150 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 204
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831
+++PE T DV+SFGV+ E+ ++ + L+ L +++
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGG 257
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L N D L ++ + C NP+ RP+ ++ +K
Sbjct: 258 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 295
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 120/278 (43%), Gaps = 35/278 (12%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
IGKG G VY + GE+ A++ E + F EV A + H N+V G
Sbjct: 41 IGKGRFGQVYHGRW-HGEV-AIRLIDIERDNEDQLKA-FKREVMAYRQTRHENVVLFMGA 97
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
C+ HL I+ K +L ++ + ++ TR+ + + IV + Y+H I+
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQ--IAQEIVKGMGYLHAKG---IL 152
Query: 730 HRDISSKNVLLDFENEAHVSDFG---IAKFLKPDSSNWTELA---GTYGYVAPELAYTMK 783
H+D+ SKNV D + ++DFG I+ L+ +L G ++APE+ +
Sbjct: 153 HKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE-DKLRIQNGWLCHLAPEIIRQLS 210
Query: 784 ---------VTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
++ DV++ G + E+ H R++ F + + +M P
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYEL----HAREW----PFKTQPAEAIIWQMGTGMKPN 262
Query: 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
S+ K IS ++ + C E RPT K+ +L+
Sbjct: 263 LSQIGMGKEIS--DILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 610 IGKGGQGSV---YMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
+G G GSV Y ++L + +AVKK P + ++ + E++ L + H N++ +
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 84
Query: 667 YGFCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCF 725
+ E + + +L L+N + L ++ ++ L Y+H+
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS--- 141
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKV 784
I+HRD+ NV ++ + E + DFG+A+ + + + T Y APE+ M
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV---ATRWYRAPEIMLNWMHY 198
Query: 785 TEKCDVYSFGVLALEVIKGK 804
+ D++S G + E+++GK
Sbjct: 199 NQTVDIWSVGCIMAELLQGK 218
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + DF +A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K WT L GT
Sbjct: 136 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPE 189
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 21/216 (9%)
Query: 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-- 658
D++ IG+G G V + + S + K S F E + +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 659 --WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN-DAAAKNLGWTRRMNMIKGIVD 715
W +V+++ R+L++V EY L ++SN D K W R +V
Sbjct: 133 SPW---VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EVVL 184
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-GTYGYV 774
AL +H+ F +HRD+ N+LLD ++DFG + + + A GT Y+
Sbjct: 185 ALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 775 APELAYTMK----VTEKCDVYSFGVLALEVIKGKHP 806
+PE+ + +CD +S GV E++ G P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K WT L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 42/253 (16%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN----------- 694
++ L+E L ++ H +++K+YG C L ++ EY K SL L
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 695 ------------DAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF 742
D A +G ++ I + Y+ +VHRD++++N+L+
Sbjct: 131 GGSRNSSSLDHPDERALTMG--DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAE 185
Query: 743 ENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEV 800
+ +SDFG+++ + + S G ++A E + T + DV+SFGVL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 801 IK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPE 859
+ G +P I NL M P N +++ ++ + C + P+
Sbjct: 246 VTLGGNPYPGIPPERL--FNLLKTGHRMERP------DNCSEEMYRLM---LQCWKQEPD 294
Query: 860 SRPTMQKVCQLLK 872
RP + + L+
Sbjct: 295 KRPVFADISKDLE 307
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 21/216 (9%)
Query: 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-- 658
D++ IG+G G V + + S + K S F E + +
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 659 --WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN-DAAAKNLGWTRRMNMIKGIVD 715
W +V+++ R+L++V EY L ++SN D K W R +V
Sbjct: 128 SPW---VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EVVL 179
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-GTYGYV 774
AL +H+ F +HRD+ N+LLD ++DFG + + + A GT Y+
Sbjct: 180 ALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 236
Query: 775 APELAYTMK----VTEKCDVYSFGVLALEVIKGKHP 806
+PE+ + +CD +S GV E++ G P
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 27/153 (17%)
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVTE 786
+HRD++++N+LL N + DFG+A+ + PD + ++APE + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 787 KCDVYSFGVLALEVIK-GKHP-------RDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838
K DV+S+GVL E+ G P DF S + M P TP
Sbjct: 281 KSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGM--------RMRAPEYSTP--- 329
Query: 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
I ++ + C +P+ RP ++ + L
Sbjct: 330 ------EIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVTE 786
+HRD++++N+LL +N + DFG+A+ + PD + ++APE + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 787 KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLIS- 845
+ DV+SFGVL E+ S+ S + +DE RL +R +
Sbjct: 275 QSDVWSFGVLLWEIF----------SLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTP 323
Query: 846 -IVEVTISCVDENPESRPTMQKVCQLL 871
+ + + C P RPT ++ + L
Sbjct: 324 EMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W LAGT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 598 IRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFH-SPLPGEMTFQQEFLNEVKAL 655
IR T F + +G G V++ K +G++ A+K SP + + + NE+ L
Sbjct: 7 IRKTFIFME--VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE----NEIAVL 60
Query: 656 TEIWHRNIVKVYGFCLHVRHLFIVYE-------YFKMCSLAVILSNDAAAKNLGWTRRMN 708
+I H NIV + H ++V + + ++ V DA+
Sbjct: 61 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---------- 110
Query: 709 MIKGIVDALSYMHNDCFPPIVHRDISSKNVLL---DFENEAHVSDFGIAKFLKPDSSNWT 765
+I+ ++ A+ Y+H + IVHRD+ +N+L + ++ ++DFG++K + +
Sbjct: 111 VIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMS 165
Query: 766 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
GT GYVAPE+ ++ D +S GV+ ++ G P
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVTE 786
+HRD++++N+LL +N + DFG+A+ + PD + ++APE + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 787 KCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLIS 845
+ DV+SFGVL E+ G P + +DE RL +R +
Sbjct: 273 QSDVWSFGVLLWEIFSLGASPYP------------GVKIDEEFCRRLKEGTRMRAPDYTT 320
Query: 846 --IVEVTISCVDENPESRPTMQKVCQLL 871
+ + + C P RPT ++ + L
Sbjct: 321 PEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 118/279 (42%), Gaps = 32/279 (11%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 18 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 74
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL + N+ ++ + M I D
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG--TYGY 773
++Y++ + F VHRD++++N ++ + + DFG+ + + G +
Sbjct: 135 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 191
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833
++PE T DV+SFGV+ E+ ++ + L+ L +++ L
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGGLL 244
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N D L+ ++ + C NP+ RP+ ++ +K
Sbjct: 245 DKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIK 280
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 121/281 (43%), Gaps = 36/281 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 23 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 79
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL ++N+ ++ + M I D
Sbjct: 80 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----Y 771
++Y++ + F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 140 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 194
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831
+++PE T DV+SFGV+ E+ ++ + L+ L +++
Sbjct: 195 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGG 247
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L N D L ++ + C NP+ RP+ ++ +K
Sbjct: 248 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 285
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 34/280 (12%)
Query: 610 IGKGGQGSVY---MSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G VY + GE +AVK + + + EFLNE + ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 81
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLG-----WTRRMNMIKGIVDA 716
V++ G + +V E L L + A N G + M I D
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----YG 772
++Y++ F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 142 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 196
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832
++APE T D++SFGV+ E+ ++ + L+ L ++D
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGY 249
Query: 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N +++ ++ + C NP+ RPT ++ LLK
Sbjct: 250 LDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 286
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 42/253 (16%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN----------- 694
++ L+E L ++ H +++K+YG C L ++ EY K SL L
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 695 ------------DAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF 742
D A +G ++ I + Y+ +VHRD++++N+L+
Sbjct: 131 GGSRNSSSLDHPDERALTMG--DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAE 185
Query: 743 ENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEV 800
+ +SDFG+++ + + S G ++A E + T + DV+SFGVL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 801 IK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPE 859
+ G +P I NL M P N +++ ++ + C + P+
Sbjct: 246 VTLGGNPYPGIPPERL--FNLLKTGHRMERP------DNCSEEMYRLM---LQCWKQEPD 294
Query: 860 SRPTMQKVCQLLK 872
RP + + L+
Sbjct: 295 KRPVFADISKDLE 307
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
Q+ E + ++ H NIV+++ ++ Y F + + + + A +
Sbjct: 50 QKLEREARICRKLQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 106
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSS 762
+ I+ I+++++Y H++ IVHR++ +N+LL + + ++DFG+A + DS
Sbjct: 107 ASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSE 162
Query: 763 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
W AGT GY++PE+ ++ D+++ GV+ ++ G P
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
Q+ E + ++ H NIV+++ ++ Y F + + + + A +
Sbjct: 49 QKLEREARICRKLQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 105
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSS 762
+ I+ I+++++Y H++ IVHR++ +N+LL + + ++DFG+A + DS
Sbjct: 106 ASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSE 161
Query: 763 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
W AGT GY++PE+ ++ D+++ GV+ ++ G P
Sbjct: 162 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
Q+ E + ++ H NIV+++ ++ Y F + + + + A +
Sbjct: 50 QKLEREARICRKLQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 106
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSS 762
+ I+ I+++++Y H++ IVHR++ +N+LL + + ++DFG+A + DS
Sbjct: 107 ASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSE 162
Query: 763 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
W AGT GY++PE+ ++ D+++ GV+ ++ G P
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + FG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVTE 786
+HRD++++N+LL +N + DFG+A+ + PD + ++APE + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 787 KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLIS- 845
+ DV+SFGVL E+ S+ S + +DE RL +R +
Sbjct: 282 QSDVWSFGVLLWEIF----------SLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTP 330
Query: 846 -IVEVTISCVDENPESRPTMQKVCQLL 871
+ + + C P RPT ++ + L
Sbjct: 331 EMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVTE 786
+HRD++++N+LL +N + DFG+A+ + PD + ++APE + T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 787 KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLIS- 845
+ DV+SFGVL E+ S+ S + +DE RL +R +
Sbjct: 280 QSDVWSFGVLLWEIF----------SLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTP 328
Query: 846 -IVEVTISCVDENPESRPTMQKVCQLL 871
+ + + C P RPT ++ + L
Sbjct: 329 EMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 113/278 (40%), Gaps = 30/278 (10%)
Query: 610 IGKGGQGSVY---MSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G VY + GE +AVK + + + EFLNE + ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 79
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLG-----WTRRMNMIKGIVDA 716
V++ G + +V E L L + A N G + M I D
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG--TYGYV 774
++Y++ F VHRD++++N ++ + + DFG+ + + G ++
Sbjct: 140 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
APE T D++SFGV+ E+ ++ + L+ L ++D
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGYLD 249
Query: 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N +++ ++ + C NP+ RPT ++ LLK
Sbjct: 250 QPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 284
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 21/216 (9%)
Query: 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-- 658
D++ IG+G G V + + S + K S F E + +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 659 --WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN-DAAAKNLGWTRRMNMIKGIVD 715
W +V+++ R+L++V EY L ++SN D K W R +V
Sbjct: 133 SPW---VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYT--AEVVL 184
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELA-GTYGYV 774
AL +H+ F +HRD+ N+LLD ++DFG + + + A GT Y+
Sbjct: 185 ALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 775 APELAYTMK----VTEKCDVYSFGVLALEVIKGKHP 806
+PE+ + +CD +S GV E++ G P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 34/280 (12%)
Query: 610 IGKGGQGSVY---MSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G VY + GE +AVK + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLG-----WTRRMNMIKGIVDA 716
V++ G + +V E L L + A N G + M I D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----YG 772
++Y++ F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 197
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832
++APE T D++SFGV+ E+ ++ + L+ L ++D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGY 250
Query: 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N +++ ++ + C NP+ RPT ++ LLK
Sbjct: 251 LDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 287
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
+E + E + + ++ + IV++ G C L +V E L L + + +
Sbjct: 381 EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR--EEIPVSN 437
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT 765
++ + + Y+ F VHR+++++NVLL + A +SDFG++K L D S +T
Sbjct: 438 VAELLHQVSMGMKYLEEKNF---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494
Query: 766 EL-AGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 806
AG + + APE K + + DV+S+GV E + G+ P
Sbjct: 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 631 VKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAV 690
+KK S ++E EV L ++ H N++ ++ + + ++ E L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 691 ILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EA 746
L A ++L + IK I+D ++Y+H I H D+ +N++L +N
Sbjct: 105 FL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158
Query: 747 HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
I++RD+ +N+LLD E ++DFG++K GT Y+APE+ +
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHS 210
Query: 788 CDVYSFGVLALEVIKGKHP 806
D +S+GVL E++ G P
Sbjct: 211 ADWWSYGVLMFEMLTGSLP 229
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 113/278 (40%), Gaps = 30/278 (10%)
Query: 610 IGKGGQGSVY---MSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G VY + GE +AVK + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLG-----WTRRMNMIKGIVDA 716
V++ G + +V E L L + A N G + M I D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG--TYGYV 774
++Y++ F VHRD++++N ++ + + DFG+ + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
APE T D++SFGV+ E+ ++ + L+ L ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N +++ ++ + C NP+ RPT ++ LLK
Sbjct: 253 QPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 287
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 18/170 (10%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHV----RHLFIVYEYFKMCSLAVILSNDAAAKN 700
+Q F E + L + H NIV+ Y + + +V E +L L K
Sbjct: 69 RQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKI 128
Query: 701 ---LGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN-EAHVSDFGIAKF 756
W R+ I+ L ++H PPI+HRD+ N+ + + D G+A
Sbjct: 129 KVLRSWCRQ------ILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
Query: 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ +S + GT + APE Y K E DVY+FG LE ++P
Sbjct: 182 KR--ASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + D G+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + D G+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 39/217 (17%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYG 668
+G G +G++ + +AVK+ LP +F EV+ L E H N+++
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFAD---REVQLLRESDEHPNVIRY-- 83
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT--RRMNMIKGIVDALSYMHNDCFP 726
FC F +Y + A L K+ + +++ L+++H+
Sbjct: 84 FCTEKDRQF---QYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---L 137
Query: 727 PIVHRDISSKNVLLDFEN-----EAHVSDFGIAKFL---KPDSSNWTELAGTYGYVAPEL 778
IVHRD+ N+L+ N +A +SDFG+ K L + S + + GT G++APE+
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM 197
Query: 779 AYTMKVTEKC--------DVYSFGVLALEVI-KGKHP 806
++E C D++S G + VI +G HP
Sbjct: 198 -----LSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 42/253 (16%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSN----------- 694
++ L+E L ++ H +++K+YG C L ++ EY K SL L
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 695 ------------DAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF 742
D A +G ++ I + Y+ +VHRD++++N+L+
Sbjct: 131 GGSRNSSSLDHPDERALTMG--DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAE 185
Query: 743 ENEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEV 800
+ +SDFG+++ + + S G ++A E + T + DV+SFGVL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 801 IK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPE 859
+ G +P I NL M P N +++ ++ + C + P+
Sbjct: 246 VTLGGNPYPGIPPERL--FNLLKTGHRMERP------DNCSEEMYRLM---LQCWKQEPD 294
Query: 860 SRPTMQKVCQLLK 872
RP + + L+
Sbjct: 295 KRPVFADISKDLE 307
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Query: 614 GQGSVYMSKLAS----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669
G+GS KLA+ + +A+K L + E+ L + H +I+K+Y
Sbjct: 18 GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV 77
Query: 670 CLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729
+ +V EY I+ ++ G RR + I+ A+ Y H IV
Sbjct: 78 ITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG--RRF--FQQIICAIEYCHRH---KIV 130
Query: 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTEKC 788
HRD+ +N+LLD ++DFG++ + D + G+ Y APE+ + +
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 789 DVYSFGVLALEVIKGKHPRD--FISSMSFSSLN 819
DV+S G++ ++ G+ P D FI ++ F +N
Sbjct: 190 DVWSCGIVLYVMLVGRLPFDDEFIPNL-FKKVN 221
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 33 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 89
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL + N+ ++ + M I D
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----Y 771
++Y++ + F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 150 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 204
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831
+++PE T DV+SFGV+ E+ ++ + L+ L +++
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGG 257
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L N D L ++ + C NP+ RP+ ++ +K
Sbjct: 258 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 295
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 20 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 76
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL + N+ ++ + M I D
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----Y 771
++Y++ + F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 137 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 191
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831
+++PE T DV+SFGV+ E+ ++ + L+ L +++
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGG 244
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L N D L ++ + C NP+ RP+ ++ +K
Sbjct: 245 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 282
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G GSV + +G +AVKK P + ++ + E++ L + H N++ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 669 FCLHVRHLFIVYEYFKMCSL-AVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
R L + + + L L+N + L +I I+ L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 786
I+HRD+ N+ ++ + E + D G+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 787 KCDVYSFGVLALEVIKGK 804
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 112/278 (40%), Gaps = 30/278 (10%)
Query: 610 IGKGGQGSVY---MSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G VY + GE +AVK + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLG-----WTRRMNMIKGIVDA 716
V++ G + +V E L L + A N G + M I D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG--TYGYV 774
++Y++ F VHRD++++N ++ + + DFG+ + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
APE T D++SFGV+ E+ ++ + L+ L ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N +++ ++ + C NP RPT ++ LLK
Sbjct: 253 QPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLK 287
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 26 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 82
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL + N+ ++ + M I D
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----Y 771
++Y++ + F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 143 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 197
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831
+++PE T DV+SFGV+ E+ ++ + L+ L +++
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGG 250
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L N D L ++ + C NP+ RP+ ++ +K
Sbjct: 251 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 288
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 602 NDFDDEHCIGKGGQGSVYMSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658
ND + IG+G G V +++ + A+K+ + ++F E++ L ++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKL 79
Query: 659 WHR-NIVKVYGFCLHVRHLFIVYEYFKMCSL------AVILSNDAA-------AKNLGWT 704
H NI+ + G C H +L++ EY +L + +L D A A L
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNW 764
+ ++ + + Y+ F +HR+++++N+L+ A ++DFG+++
Sbjct: 140 QLLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSR------GQE 190
Query: 765 TELAGTYG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSS 817
+ T G ++A E L Y++ T DV+S+GVL E++ G P M+ +
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTP---YCGMTCAE 246
Query: 818 LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867
L + L+ L N D++ ++ C E P RP+ ++
Sbjct: 247 LYEKLPQGYRLEKPL-----NCDDEVYDLMR---QCWREKPYERPSFAQI 288
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 32/279 (11%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 27 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 83
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL + N+ ++ + M I D
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG--TYGY 773
++Y++ + F VHRD++++N ++ + + DFG+ + + G +
Sbjct: 144 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 200
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833
++PE T DV+SFGV+ E+ ++ + L+ L +++ L
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGGLL 253
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N D L ++ + C NP+ RP+ ++ +K
Sbjct: 254 DKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 289
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSND----AAAKNL 701
+F NE++ +T+I + + G + ++I+YEY + S IL D KN
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS---ILKFDEYFFVLDKNY 144
Query: 702 GWTRRMNMIKGIV----DALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757
+ +IK I+ ++ SY+HN+ I HRD+ N+L+D +SDFG ++++
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
Query: 758 KPDSSNWTELAGTYGYVAPEL-----AYTMKVTEKCDVYSFGV 795
+ GTY ++ PE +Y K D++S G+
Sbjct: 203 VDKKIKGSR--GTYEFMPPEFFSNESSYN---GAKVDIWSLGI 240
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDX 212
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEV 800
T ++APE + T + DV+SFGVL E+
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 40/291 (13%)
Query: 230 PISMGNLSNLTYLNLFENSLSGAIPYE--YRNLVKLTILLLGHNQFRGPI--PILRNLTS 285
P + L +L L L+ LS A+ + +RNL LT L L NQ R P L S
Sbjct: 90 PDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNS 149
Query: 286 LERVRLDRN--YLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPK------LSTL 337
L+ + N +L L++ L+ N+ Y +S DWG+C L L
Sbjct: 150 LKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEIL 209
Query: 338 DFSIN----NITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLS 393
D S N +ITGN I S + + ++HI+G F N +
Sbjct: 210 DVSGNGWTVDITGNFSNAISKSQAFSL--ILAHHIMG------AGFGFHNIKDPDQNTFA 261
Query: 394 GQLSPKLGSLVQLEHLDLSSN---RLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQI 450
G + HLDLS L++ + ++L +L++ L+L+ N + +
Sbjct: 262 GLARSS------VRHLDLSHGFVFSLNSRVFETLKDLKV-----LNLAYNKINKIADEAF 310
Query: 451 CIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFK 501
+ +L+ LNLS+N L L S F + + +ID+ N + +I TFK
Sbjct: 311 YGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHI--AIIQDQTFK 359
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 36/240 (15%)
Query: 279 ILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEI-SSDWGRCPKLSTL 337
+ L L+ + L N + E+FY NL ++LS N GE+ SS++ PK++ +
Sbjct: 285 VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY-NLLGELYSSNFYGLPKVAYI 343
Query: 338 DFSINNITGNVPPEIGHSSQLGVLDLSSN-----HIVGEIP---------IELGKLNFFI 383
D N+I +L LDL N H + IP + L K+N
Sbjct: 344 DLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTA 403
Query: 384 KLV-LAHNQLSGQLSPKLGSLVQLEHLD---LSSNRLS----NSIPKSLGNLELIHLSEL 435
L+ L+ N+L L L+++ HL L+ NR S + P +LE + L E
Sbjct: 404 NLIHLSENRLENL--DILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGE- 460
Query: 436 DLSRNFLREAIPSQICI-----MQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNEL 490
N L+ A +++C + L+ L L+HN L+ L P F + L + ++ N L
Sbjct: 461 ----NMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRL 516
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 17 LRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSI--PGEIGNFRFFSDL 74
RNL +L L+LG++K+ P + L +L L ++ LS ++ G N + + L
Sbjct: 69 FRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRL 128
Query: 75 ELSNNKL-SGSIPPSLGNLSNLATLYLDTNSL 105
+LS N++ S + PS G L++L ++ +N +
Sbjct: 129 DLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI 160
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 134 PHSLGNLTNLATLYIYSNSLSASIL--GKIGNLKSLSNLQLSENNFNG-SIPPSLGNLSN 190
P + L +L L +Y LS ++L G NLK+L+ L LS+N + PS G L++
Sbjct: 90 PDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNS 149
Query: 191 LATLYLDTNSL 201
L ++ +N +
Sbjct: 150 LKSIDFSSNQI 160
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 27 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 83
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL + N+ ++ + M I D
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----Y 771
++Y++ + F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 144 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 198
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831
+++PE T DV+SFGV+ E+ ++ + L+ L +++
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGG 251
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L N D L ++ + C NP+ RP+ ++ +K
Sbjct: 252 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 289
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 30/224 (13%)
Query: 601 TNDFDDEH----CIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKAL 655
T D DE+ IG G G V ++ +G+ +A+KK + +T + L E+K L
Sbjct: 50 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKIL 108
Query: 656 TEIWHRNIVKV---------YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
H NI+ + YG + +++V + + +I S+ + L
Sbjct: 109 KHFKHDNIIAIKDILRPTVPYG---EFKSVYVVLDLMESDLHQIIHSS----QPLTLEHV 161
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL--KPDSSNW 764
+ ++ L YMH+ ++HRD+ N+L++ E + DFG+A+ L P +
Sbjct: 162 RYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 765 --TELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKH 805
TE T Y APEL ++ + T+ D++S G + E++ +
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 24 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 80
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL + N+ ++ + M I D
Sbjct: 81 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----Y 771
++Y++ + F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 141 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 195
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831
+++PE T DV+SFGV+ E+ ++ + L+ L +++
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGG 248
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L N D L ++ + C NP+ RP+ ++ +K
Sbjct: 249 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 286
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDX 212
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 26 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 82
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL + N+ ++ + M I D
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----Y 771
++Y++ + F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 143 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 197
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831
+++PE T DV+SFGV+ E+ ++ + L+ L +++
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGG 250
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L N D L ++ + C NP+ RP+ ++ +K
Sbjct: 251 LLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 288
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G+G G V+ M +G AVKK + F+ E L L+ IV +YG
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSP---RIVPLYG 117
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ I E + SL ++ R + + ++ L Y+H I
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---RI 171
Query: 729 VHRDISSKNVLLDFE-NEAHVSDFGIAKFLKPDSSNWTELAGTY-----GYVAPELAYTM 782
+H D+ + NVLL + + A + DFG A L+PD + L G Y ++APE+
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 783 KVTEKCDVYSFGVLALEVIKGKHP 806
K D++S + L ++ G HP
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 30/278 (10%)
Query: 610 IGKGGQGSVY---MSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G VY + GE +AVK + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLG-----WTRRMNMIKGIVDA 716
V++ G + +V E L L + A N G + M I D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG--TYGYV 774
++Y++ F VHRD++++N ++ + + DFG+ + + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 775 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834
APE T D++SFGV+ E+ ++ + L+ L ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N +++ ++ + C NP+ RPT ++ LLK
Sbjct: 253 QPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 287
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 23/218 (10%)
Query: 597 IIRATNDFDDEHCIGKGGQG-SVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKAL 655
I+ ++ +D IG G G + M + E++AVK + Q+E +N
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINH---- 70
Query: 656 TEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+ H NIV+ L HL I+ EY L + N A + ++
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLLS 127
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAH--VSDFGIAK----FLKPDSSNWTELAG 769
+SY H+ I HRD+ +N LLD + DFG +K +P S+ G
Sbjct: 128 GVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VG 179
Query: 770 TYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHP 806
T Y+APE+ + K DV+S GV ++ G +P
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 30/224 (13%)
Query: 601 TNDFDDEH----CIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKAL 655
T D DE+ IG G G V ++ +G+ +A+KK + +T + L E+K L
Sbjct: 49 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKIL 107
Query: 656 TEIWHRNIVKV---------YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
H NI+ + YG + +++V + + +I S+ + L
Sbjct: 108 KHFKHDNIIAIKDILRPTVPYG---EFKSVYVVLDLMESDLHQIIHSS----QPLTLEHV 160
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL--KPDSSNW 764
+ ++ L YMH+ ++HRD+ N+L++ E + DFG+A+ L P +
Sbjct: 161 RYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 765 --TELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKH 805
TE T Y APEL ++ + T+ D++S G + E++ +
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 610 IGKGGQGSVYMSKLASGEI-------IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+G+G G VY +A G + +A+K + M + EFLNE + E +
Sbjct: 20 LGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 76
Query: 663 IVKVYGFCLHVRHLFIVYEYFK-------MCSLAVILSNDAAAKNLGWTRRMNMIKGIVD 715
+V++ G + ++ E + SL + N+ ++ + M I D
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 716 ALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----Y 771
++Y++ + F VHRD++++N + + + DFG+ + + +++ G
Sbjct: 137 GMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 191
Query: 772 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831
+++PE T DV+SFGV+ E+ ++ + L+ L +++
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSNEQVLRFVMEGG 244
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
L N D L+ ++ + C NP+ RP+ ++ +K
Sbjct: 245 LLDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIK 282
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 49/288 (17%)
Query: 619 YMSKLASGEIIAVKKFH--SPLPGEMT---------------FQQEFLNEVKALTEIWHR 661
+M +L V K H P PGE T ++EF +E + H
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+V + G + L +++ Y L L + ++G T +K ++ ++H
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 722 ----------NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT- 770
+VH+D++++NVL+ + +SD G+ F + ++++ +L G
Sbjct: 133 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLGNS 190
Query: 771 ---YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDE 826
++APE K + D++S+GV+ EV G P S N + E
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS---------NQDVVE 241
Query: 827 MLDPR--LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
M+ R LP P D + + I C +E P RP + + L+
Sbjct: 242 MIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 171 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 224
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 646 QEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTR 705
Q+ E + ++ H NIV+++ ++ Y F + + + + A +
Sbjct: 73 QKLEREARICRKLQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 129
Query: 706 RMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSS 762
+ I+ I+++++Y H++ IVHR++ +N+LL + + ++DFG+A + DS
Sbjct: 130 ASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSE 185
Query: 763 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVL 796
W AGT GY++PE+ ++ D+++ GV+
Sbjct: 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 219
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 137 IVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 190
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 145 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 198
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 171 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 224
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 143 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 196
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 143 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 196
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 206 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 258
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEV 800
T ++APE + T + DV+SFGVL E+
Sbjct: 259 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 114/286 (39%), Gaps = 45/286 (15%)
Query: 619 YMSKLASGEIIAVKKFH--SPLPGEMT---------------FQQEFLNEVKALTEIWHR 661
+M +L V K H P PGE T ++EF +E + H
Sbjct: 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 89
Query: 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
N+V + G + L +++ Y L L + ++G T +K ++ ++H
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 722 NDCFPP----------IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT- 770
+VH+D++++NVL+ + +SD G+ F + ++++ +L G
Sbjct: 150 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLGNS 207
Query: 771 ---YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDE 826
++APE K + D++S+GV+ EV G P S+ + N +
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV-- 265
Query: 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
LP P D + + I C +E P RP + + L+
Sbjct: 266 -----LPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G+G G V+ M +G AVKK + F+ E L L+ IV +YG
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSP---RIVPLYG 133
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ I E + SL ++ L R + + ++ L Y+H I
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGC---LPEDRALYYLGQALEGLEYLHTR---RI 187
Query: 729 VHRDISSKNVLLDFE-NEAHVSDFGIAKFLKPDSSNWTELAGTY-----GYVAPELAYTM 782
+H D+ + NVLL + + A + DFG A L+PD + L G Y ++APE+
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 783 KVTEKCDVYSFGVLALEVIKGKHP 806
K D++S + L ++ G HP
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+++D + V+DFG+AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 610 IGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G+G G V+ M +G AVKK + F+ E L L+ IV +YG
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSP---RIVPLYG 131
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ I E + SL ++ R + + ++ L Y+H I
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---RI 185
Query: 729 VHRDISSKNVLLDFE-NEAHVSDFGIAKFLKPDSSNWTELAGTY-----GYVAPELAYTM 782
+H D+ + NVLL + + A + DFG A L+PD + L G Y ++APE+
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 783 KVTEKCDVYSFGVLALEVIKGKHP 806
K D++S + L ++ G HP
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 32/238 (13%)
Query: 644 FQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGW 703
+ + F ++++ H+++V YG C+ +V E+ K SL L + N+ W
Sbjct: 55 YSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW 114
Query: 704 TRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA--------HVSDFGIAK 755
++ + K + A+ ++ + ++H ++ +KN+LL E + +SD GI+
Sbjct: 115 --KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI 169
Query: 756 FLKPDSSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSMS 814
+ P L +V PE K + D +SFG E+ G
Sbjct: 170 TVLPKDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG-------GDKP 218
Query: 815 FSSLNLNIALDEMLDP-RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
S+L+ L D +LP P K + + +C+D P+ RP+ + + + L
Sbjct: 219 LSALDSQRKLQFYEDRHQLPAP------KAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 708 NMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN--EAHVSDFGIAK-FLKPDSSNW 764
N+++ I AL Y+HN I HRDI +N L E + DFG++K F K ++ +
Sbjct: 172 NIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 765 ---TELAGTYGYVAPELAYTMKVT--EKCDVYSFGVLALEVIKGKHP 806
T AGT +VAPE+ T + KCD +S GVL ++ G P
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 116/268 (43%), Gaps = 35/268 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN--IVKVY 667
IG GG V+ +I A+K + T + NE+ L ++ + I+++Y
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 78
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ + +++++V E C + S K++ R + K +++A+ +H
Sbjct: 79 DYEITDQYIYMVME----CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--- 131
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVT 785
IVH D+ N L+ + + DFGIA ++PD+++ + GT Y+ PE M +
Sbjct: 132 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 190
Query: 786 EK-----------CDVYSFGVLALEVIKGKHP-RDFISSMSFSSLNLNIALDEMLDPRLP 833
+ DV+S G + + GK P + I+ +S L ++DP
Sbjct: 191 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KLHAIIDPNHE 242
Query: 834 TPSRNVHDKLISIVEVTISCVDENPESR 861
++ +K + +V C+ +P+ R
Sbjct: 243 IEFPDIPEK--DLQDVLKCCLKRDPKQR 268
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ L + + + L + L R ++ ++ + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---I 147
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+++ + + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 789 DVYSFGVLALEVIKG 803
D++S GV+ E+IKG
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK--PDSSNW 764
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ + N
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 597 IIRATNDFDDEHCIGKGGQGSVYMSK--LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKA 654
+ RA ++ IG+G G V+ ++ G +A+K+ GE + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-GEEGMPLSTIREVAV 64
Query: 655 LTEIW---HRNIVKVYGFCLHVR-----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
L + H N+V+++ C R L +V+E+ L L + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVPTETI 122
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+M+ ++ L ++H+ +VHRD+ +N+L+ + ++DFG+A+ + T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTS 178
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 804
+ T Y APE+ D++S G + E+ + K
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLAR----DINNIDY 212
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 1/176 (0%)
Query: 28 LGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNN-KLSGSIP 86
L N++S S NL L++H+N L+ L+LS+N +L P
Sbjct: 38 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 97
Query: 87 PSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXXXXXXXXXXPHSLGNLTNLATL 146
+ L L TL+LD L P + +L NL L
Sbjct: 98 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 157
Query: 147 YIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLS 202
+++ N +S+ L SL L L +N P + +L L TLYL N+LS
Sbjct: 158 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 213
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 1/173 (0%)
Query: 4 IYNNSLYDSIPSELRNLKSLSDLELGNN-KLSGSIPHSLGNLTNLATLYIHTNSLSGSIP 62
+++N L + L L L+L +N +L P + L L TL++ L P
Sbjct: 62 LHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP 121
Query: 63 GEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXX 122
G L L +N L + +L NL L+L N +S+
Sbjct: 122 GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRL 181
Query: 123 XXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSEN 175
PH+ +L L TLY+++N+LSA + L++L L+L++N
Sbjct: 182 LLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 72/179 (40%), Gaps = 2/179 (1%)
Query: 142 NLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSI-PPSLGNLSNLATLYLDTNS 200
NL L+++SN L+ L L L LS+N S+ P + L L TL+LD
Sbjct: 56 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 115
Query: 201 LSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNL 260
L P N L + +L NLT+L L N +S +R L
Sbjct: 116 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 175
Query: 261 VKLTILLLGHNQFRGPIP-ILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQN 318
L LLL N+ P R+L L + L N L+ +E+ L Y+ L+ N
Sbjct: 176 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 35.0 bits (79), Expect = 0.16, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 385 LVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSI-PKSLGNLELIHLSELDLSRNFLR 443
L L N L+ + L LE LDLS N S+ P + L +H LD R L+
Sbjct: 60 LWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLD--RCGLQ 117
Query: 444 EAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIP 495
E P + +L+ L L N+L L F + L H+ + N + S+P
Sbjct: 118 ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI-SSVP 168
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 147 VSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLAR----DINNIDY 199
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 200 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 240
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V+ ++ +G+ +A+KK E F L E+K L + H N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIE 84
Query: 669 FCL-----HVRHLFIVYEYFKMCS--LAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
C + R +Y F C LA +LSN L +R+ ++ +++ L Y+H
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH 142
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755
+ I+HRD+ + NVL+ + ++DFG+A+
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 1/176 (0%)
Query: 28 LGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNN-KLSGSIP 86
L N++S S NL L++H+N L+ L+LS+N +L P
Sbjct: 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98
Query: 87 PSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXXXXXXXXXXPHSLGNLTNLATL 146
+ L L TL+LD L P + +L NL L
Sbjct: 99 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158
Query: 147 YIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLS 202
+++ N +S+ L SL L L +N P + +L L TLYL N+LS
Sbjct: 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 1/173 (0%)
Query: 4 IYNNSLYDSIPSELRNLKSLSDLELGNN-KLSGSIPHSLGNLTNLATLYIHTNSLSGSIP 62
+++N L + L L L+L +N +L P + L L TL++ L P
Sbjct: 63 LHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP 122
Query: 63 GEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXX 122
G L L +N L + +L NL L+L N +S+
Sbjct: 123 GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRL 182
Query: 123 XXXXXXXXXXXPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSEN 175
PH+ +L L TLY+++N+LSA + L++L L+L++N
Sbjct: 183 LLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 72/179 (40%), Gaps = 2/179 (1%)
Query: 142 NLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSI-PPSLGNLSNLATLYLDTNS 200
NL L+++SN L+ L L L LS+N S+ P + L L TL+LD
Sbjct: 57 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 116
Query: 201 LSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNL 260
L P N L + +L NLT+L L N +S +R L
Sbjct: 117 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 176
Query: 261 VKLTILLLGHNQFRGPIP-ILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQN 318
L LLL N+ P R+L L + L N L+ +E+ L Y+ L+ N
Sbjct: 177 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 35.0 bits (79), Expect = 0.17, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 385 LVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSI-PKSLGNLELIHLSELDLSRNFLR 443
L L N L+ + L LE LDLS N S+ P + L +H LD R L+
Sbjct: 61 LWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLD--RCGLQ 118
Query: 444 EAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIP 495
E P + +L+ L L N+L L F + L H+ + N + S+P
Sbjct: 119 ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI-SSVP 169
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN--IVKVY 667
IG GG V+ +I A+K + T + NE+ L ++ + I+++Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 94
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ + +++++V E C + S K++ R + K +++A+ +H
Sbjct: 95 DYEITDQYIYMVME----CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--- 147
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVT 785
IVH D+ N L+ + + DFGIA ++PD+++ + GT Y+ PE M +
Sbjct: 148 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 786 EK-----------CDVYSFGVLALEVIKGKHP-RDFISSMSFSSLNLNIALDEMLDPRLP 833
+ DV+S G + + GK P + I+ +S L+ +D + P
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----KLHAIIDPNHEIEFP 262
Query: 834 T-PSRNVHDKLISIVEVTISCVDENPESR 861
P +++ D V C+ +P+ R
Sbjct: 263 DIPEKDLQD-------VLKCCLKRDPKQR 284
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+++D + V+DFG+AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 149 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 201
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 202 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 242
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN--IVKVY 667
IG GG V+ +I A+K + T + NE+ L ++ + I+++Y
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 75
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ + +++++V E C + S K++ R + K +++A+ +H
Sbjct: 76 DYEITDQYIYMVME----CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--- 128
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVT 785
IVH D+ N L+ + + DFGIA ++PD+++ + GT Y+ PE M +
Sbjct: 129 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 187
Query: 786 EK-----------CDVYSFGVLALEVIKGKHP-RDFISSMSFSSLNLNIALDEMLDPRLP 833
+ DV+S G + + GK P + I+ +S L+ +D + P
Sbjct: 188 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----KLHAIIDPNHEIEFP 243
Query: 834 T-PSRNVHDKLISIVEVTISCVDENPESR 861
P +++ D V C+ +P+ R
Sbjct: 244 DIPEKDLQD-------VLKCCLKRDPKQR 265
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 612 KGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCL 671
+ G G Y +K I ++ S G ++E EV L EI H NI+ ++
Sbjct: 47 QKGTGKEYAAKF-----IKKRRLXSSRRG--VSREEIEREVNILREIRHPNIITLHDIFE 99
Query: 672 HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHR 731
+ + ++ E L L A ++L +K I+D + Y+H+ I H
Sbjct: 100 NKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHF 153
Query: 732 DISSKNVLLDFEN----EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 787
D+ +N++L +N + DFGIA ++ + + + GT +VAPE+ + +
Sbjct: 154 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLE 212
Query: 788 CDVYSFGVLALEVIKGKHP 806
D++S GV+ ++ G P
Sbjct: 213 ADMWSIGVITYILLSGASP 231
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 152 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 204
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 205 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 245
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN--IVKVY 667
IG GG V+ +I A+K + T + NE+ L ++ + I+++Y
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 74
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ + +++++V E C + S K++ R + K +++A+ +H
Sbjct: 75 DYEITDQYIYMVME----CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--- 127
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVT 785
IVH D+ N L+ + + DFGIA ++PD+++ + GT Y+ PE M +
Sbjct: 128 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 186
Query: 786 EK-----------CDVYSFGVLALEVIKGKHP-RDFISSMSFSSLNLNIALDEMLDPRLP 833
+ DV+S G + + GK P + I+ +S L+ +D + P
Sbjct: 187 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----KLHAIIDPNHEIEFP 242
Query: 834 T-PSRNVHDKLISIVEVTISCVDENPESR 861
P +++ D V C+ +P+ R
Sbjct: 243 DIPEKDLQD-------VLKCCLKRDPKQR 264
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L N + + +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 610 IGKGGQGSVY---MSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G VY + GE +AVK + + + EFLNE + ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 83
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLG-----WTRRMNMIKGIVDA 716
V++ G + +V E L L + A N G + M I D
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----YG 772
++Y++ F VHR+++++N ++ + + DFG+ + + +++ G
Sbjct: 144 MAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 198
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832
++APE T D++SFGV+ E+ ++ + L+ L ++D
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGY 251
Query: 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N +++ ++ + C NP RPT ++ LLK
Sbjct: 252 LDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLK 288
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ L + + + L + L R ++ ++ + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---I 147
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+++ + + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 789 DVYSFGVLALEVIKG 803
D++S GV+ E+IKG
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 631 VKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAV 690
+KK S ++E EV L ++ H N++ ++ + + ++ E + S
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE---LVSGGE 101
Query: 691 ILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EA 746
+ A ++L + IK I+D ++Y+H I H D+ +N++L +N
Sbjct: 102 LFDFLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 747 HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 631 VKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAV 690
+KK S ++E EV L ++ H N++ ++ + + ++ E + S
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE---LVSGGE 101
Query: 691 ILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EA 746
+ A ++L + IK I+D ++Y+H I H D+ +N++L +N
Sbjct: 102 LFDFLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 747 HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V+ ++ +G+ +A+KK E F L E+K L + H N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIE 84
Query: 669 FCL-----HVRHLFIVYEYFKMCS--LAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
C + R +Y F C LA +LSN L +R+ ++ +++ L Y+H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH 142
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755
+ I+HRD+ + NVL+ + ++DFG+A+
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 32/238 (13%)
Query: 644 FQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGW 703
+ + F ++++ H+++V YG C +V E+ K SL L + N+ W
Sbjct: 55 YSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW 114
Query: 704 TRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA--------HVSDFGIAK 755
++ + K + A+ ++ + ++H ++ +KN+LL E + +SD GI+
Sbjct: 115 --KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI 169
Query: 756 FLKPDSSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSMS 814
+ P L +V PE K + D +SFG E+ G
Sbjct: 170 TVLPKDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG-------GDKP 218
Query: 815 FSSLNLNIALDEMLDP-RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871
S+L+ L D +LP P K + + +C+D P+ RP+ + + + L
Sbjct: 219 LSALDSQRKLQFYEDRHQLPAP------KAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDSSNWTELAG 769
I+ L +MHN +V+RD+ N+LLD +SD G+A KP +S G
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VG 352
Query: 770 TYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
T+GY+APE L + D +S G + ++++G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDSSNWTELAG 769
I+ L +MHN +V+RD+ N+LLD +SD G+A KP +S G
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VG 351
Query: 770 TYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
T+GY+APE L + D +S G + ++++G P
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 610 IGKGGQGSVY---MSKLASGEI---IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G VY + GE +AVK + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSN--DAAAKNLG-----WTRRMNMIKGIVDA 716
V++ G + +V E L L + A N G + M I D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGT----YG 772
++Y++ F VHR+++++N ++ + + DFG+ + + +++ G
Sbjct: 143 MAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 197
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832
++APE T D++SFGV+ E+ ++ + L+ L ++D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDGGY 250
Query: 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872
N +++ ++ + C NP RPT ++ LLK
Sbjct: 251 LDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLK 287
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 650 NEVKALTEIWHRNIVKVYG--FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRM 707
E++ L + H+N++++ + + +++V EY +C + +L + K +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC-VCGMQEML-DSVPEKRFPVCQAH 112
Query: 708 NMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT-- 765
++D L Y+H+ IVH+DI N+LL +S G+A+ L P +++ T
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 766 ELAGTYGYVAPELAYTMKVTE--KCDVYSFGVLALEVIKGKHP 806
G+ + PE+A + K D++S GV + G +P
Sbjct: 170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V+ ++ +G+ +A+KK E F L E+K L + H N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIE 84
Query: 669 FCL-----HVRHLFIVYEYFKMCS--LAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
C + R +Y F C LA +LSN L +R+ ++ +++ L Y+H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH 142
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755
+ I+HRD+ + NVL+ + ++DFG+A+
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDSSNWTELAG 769
I+ L +MHN +V+RD+ N+LLD +SD G+A KP +S G
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VG 352
Query: 770 TYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
T+GY+APE L + D +S G + ++++G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL---KPDSSNWTELAG 769
I+ L +MHN +V+RD+ N+LLD +SD G+A KP +S G
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VG 352
Query: 770 TYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
T+GY+APE L + D +S G + ++++G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
++E EV L EI H NI+ ++ + + ++ E L L A ++L
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTED 115
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EAHVSDFGIAKFLKPD 760
+K I+D + Y+H+ I H D+ +N++L +N + DFGIA ++
Sbjct: 116 EATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 171
Query: 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL ++ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG+G G V+ ++ +G+ +A+KK E F L E+K L + H N+V +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIE 83
Query: 669 FCL-----HVRHLFIVYEYFKMCS--LAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH 721
C + R +Y F C LA +LSN L +R+ ++ +++ L Y+H
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH 141
Query: 722 NDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755
+ I+HRD+ + NVL+ + ++DFG+A+
Sbjct: 142 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
++E EV L EI H NI+ ++ + + ++ E L L A ++L
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTED 108
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EAHVSDFGIAKFLKPD 760
+K I+D + Y+H+ I H D+ +N++L +N + DFGIA ++
Sbjct: 109 EATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 164
Query: 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 56/303 (18%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
+ IGKG G V+ K GE +AVK F S E ++ +E E+ + H NI+
Sbjct: 34 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENIL-- 86
Query: 667 YGFCLH-------VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDA 716
GF L++V +Y + SL L+ MIK
Sbjct: 87 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASG 138
Query: 717 LSYMHNDCF-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ 765
L+++H + P I HRD+ SKN+L+ ++D G+A ++ DS+ T
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 196
Query: 766 ELAGTYGYVAPEL---AYTMKVTE---KCDVYSFGVLALEV-----IKGKHPR------D 808
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 256
Query: 809 FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVC 868
+ S + ++ L P +P ++ + L + ++ C N +R T ++
Sbjct: 257 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 315
Query: 869 QLL 871
+ L
Sbjct: 316 KTL 318
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 14/225 (6%)
Query: 275 GPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQN--NFYGEIS-SDWGRC 331
G P L+ L SL+R+ N SE P+L ++DLS+N +F G S SD+G
Sbjct: 317 GQFPTLK-LKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGT- 372
Query: 332 PKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHI--VGEIPIELGKLNFFIKLVLAH 389
L LD S N + +G QL LD +++ + E + L N I L ++H
Sbjct: 373 TSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNL-IYLDISH 430
Query: 390 NQLSGQLSPKLGSLVQLEHLDLSSNRLS-NSIPKSLGNLELIHLSELDLSRNFLREAIPS 448
+ L LE L ++ N N +P EL +L+ LDLS+ L + P+
Sbjct: 431 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT--ELRNLTFLDLSQCQLEQLSPT 488
Query: 449 QICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGS 493
+ SL+ LN+SHN+ L ++ +N L +D S N + S
Sbjct: 489 AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 533
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 236 LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFR-----GPIPILRNLTSLERVR 290
L NL YL++ A + L L +L + N F+ LRNLT L+ +
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 291 LDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPP 350
L+ +F +L +++S NNF+ + + L LD+S+N+I +
Sbjct: 480 CQLEQLSPT---AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 536
Query: 351 EIGH-SSQLGVLDLSSN 366
E+ H S L L+L+ N
Sbjct: 537 ELQHFPSSLAFLNLTQN 553
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 301 SESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGV 360
S SF+ +P L +DLS+ + LSTL + N I S L
Sbjct: 45 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 104
Query: 361 LDLSSNHIVGEIPIELGKLNFFIKLVLAHNQL-SGQLSPKLGSLVQLEHLDLSSNRL 416
L ++ +G L +L +AHN + S +L +L LEHLDLSSN++
Sbjct: 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 229 IPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG--PIPILRNLTSL 286
+P L NLT+L+L + L P + +L L +L + HN F P + L SL
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY-KCLNSL 520
Query: 287 ERVRLDRNYLTGNISESFYIYP-NLTYIDLSQNNF 320
+ + N++ + + +P +L +++L+QN+F
Sbjct: 521 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 555
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 56/303 (18%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
+ IGKG G V+ K GE +AVK F S E ++ +E E+ + H NI+
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENIL-- 99
Query: 667 YGFCLH-------VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDA 716
GF L++V +Y + SL L+ MIK
Sbjct: 100 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASG 151
Query: 717 LSYMHNDCF-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ 765
L+++H + P I HRD+ SKN+L+ ++D G+A ++ DS+ T
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 209
Query: 766 ELAGTYGYVAPEL---AYTMKVTE---KCDVYSFGVLALEV-----IKGKHPR------D 808
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269
Query: 809 FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVC 868
+ S + ++ L P +P ++ + L + ++ C N +R T ++
Sbjct: 270 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 328
Query: 869 QLL 871
+ L
Sbjct: 329 KTL 331
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 631 VKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAV 690
+KK S ++E EV L ++ H NI+ ++ + + ++ E L
Sbjct: 45 IKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFD 104
Query: 691 ILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EA 746
L A ++L + IK I+D ++Y+H I H D+ +N++L +N
Sbjct: 105 FL---AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 747 HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 602 NDFDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH 660
+ +D +G G G V+ +++ A+G A K +P + ++ E++ ++ + H
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRH 213
Query: 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYM 720
+V ++ + ++YE+ L ++++ + + ++ + L +M
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHM 271
Query: 721 HNDCFPPIVHRDISSKNVLLDFE--NEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778
H + + VH D+ +N++ + NE + DFG+ L P S GT + APE+
Sbjct: 272 HENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAPEV 327
Query: 779 AYTMKVTEKCDVYSFGVLALEVIKGKHP 806
A V D++S GVL+ ++ G P
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 631 VKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAV 690
+KK S ++E EV L ++ H N++ ++ + + ++ E + S
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE---LVSGGE 101
Query: 691 ILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EA 746
+ A ++L + IK I+D ++Y+H I H D+ +N++L +N
Sbjct: 102 LFDFLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 747 HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 631 VKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAV 690
+KK S ++E EV L ++ H N++ ++ + + ++ E + S
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE---LVSGGE 101
Query: 691 ILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EA 746
+ A ++L + IK I+D ++Y+H I H D+ +N++L +N
Sbjct: 102 LFDFLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 747 HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+ DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN--IVKVY 667
IG GG V+ +I A+K + T + NE+ L ++ + I+++Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 122
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ + +++++V E C + S K++ R + K +++A+ +H
Sbjct: 123 DYEITDQYIYMVME----CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--- 175
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVT 785
IVH D+ N L+ + + DFGIA ++PD+++ + GT Y+ PE M +
Sbjct: 176 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 786 EK-----------CDVYSFGVLALEVIKGKHP-RDFISSMSFSSLNLNIALDEMLDPRLP 833
+ DV+S G + + GK P + I+ +S L+ +D + P
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----KLHAIIDPNHEIEFP 290
Query: 834 T-PSRNVHDKLISIVEVTISCVDENPESR 861
P +++ D V C+ +P+ R
Sbjct: 291 DIPEKDLQD-------VLKCCLKRDPKQR 312
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 597 IIRATNDFDDEHCIGKGGQGSVYMSK--LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKA 654
+ RA ++ IG+G G V+ ++ G +A+K+ GE + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-GEEGMPLSTIREVAV 64
Query: 655 LTEIW---HRNIVKVYGFCLHVR-----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
L + H N+V+++ C R L +V+E+ L L + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVPTETI 122
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+M+ ++ L ++H+ +VHRD+ +N+L+ + ++DFG+A+ + T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTS 178
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 804
+ T Y APE+ D++S G + E+ + K
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 17/196 (8%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G G V+ + G + AVK+ SP G + + L E+ V +
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPK-------DRARKLAEVGSHEKVGQHP 117
Query: 669 FCLHVRHLF----IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
C+ + + I+Y ++C ++ +A +L + ++ + AL+++H+
Sbjct: 118 CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
+VH D+ N+ L + DFG+ L + + G Y+APEL
Sbjct: 178 ---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ-EGDPRYMAPELLQGSYG 233
Query: 785 TEKCDVYSFGVLALEV 800
T DV+S G+ LEV
Sbjct: 234 T-AADVFSLGLTILEV 248
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN--IVKVY 667
IG GG V+ +I A+K + T + NE+ L ++ + I+++Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 122
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ + +++++V E C + S K++ R + K +++A+ +H
Sbjct: 123 DYEITDQYIYMVME----CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--- 175
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVT 785
IVH D+ N L+ + + DFGIA ++PD+++ + GT Y+ PE M +
Sbjct: 176 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 786 EK-----------CDVYSFGVLALEVIKGKHP-RDFISSMSFSSLNLNIALDEMLDPRLP 833
+ DV+S G + + GK P + I+ +S L+ +D + P
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----KLHAIIDPNHEIEFP 290
Query: 834 T-PSRNVHDKLISIVEVTISCVDENPESR 861
P +++ D V C+ +P+ R
Sbjct: 291 DIPEKDLQD-------VLKCCLKRDPKQR 312
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 14/225 (6%)
Query: 275 GPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQN--NFYGEIS-SDWGRC 331
G P L+ L SL+R+ N SE P+L ++DLS+N +F G S SD+G
Sbjct: 341 GQFPTLK-LKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTI 397
Query: 332 PKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHI--VGEIPIELGKLNFFIKLVLAH 389
L LD S N + +G QL LD +++ + E + L N I L ++H
Sbjct: 398 -SLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNL-IYLDISH 454
Query: 390 NQLSGQLSPKLGSLVQLEHLDLSSNRLS-NSIPKSLGNLELIHLSELDLSRNFLREAIPS 448
+ L LE L ++ N N +P EL +L+ LDLS+ L + P+
Sbjct: 455 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT--ELRNLTFLDLSQCQLEQLSPT 512
Query: 449 QICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGS 493
+ SL+ LN+SHN+ L ++ +N L +D S N + S
Sbjct: 513 AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 557
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 236 LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFR-----GPIPILRNLTSLERVR 290
L NL YL++ A + L L +L + N F+ LRNLT L+ +
Sbjct: 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503
Query: 291 LDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPP 350
L+ +F +L +++S NNF+ + + L LD+S+N+I +
Sbjct: 504 CQLEQLSPT---AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 560
Query: 351 EIGH-SSQLGVLDLSSN 366
E+ H S L L+L+ N
Sbjct: 561 ELQHFPSSLAFLNLTQN 577
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 301 SESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGV 360
S SF+ +P L +DLS+ + LSTL + N I S L
Sbjct: 69 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 128
Query: 361 LDLSSNHIVGEIPIELGKLNFFIKLVLAHNQL-SGQLSPKLGSLVQLEHLDLSSNRL 416
L ++ +G L +L +AHN + S +L +L LEHLDLSSN++
Sbjct: 129 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 229 IPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG--PIPILRNLTSL 286
+P L NLT+L+L + L P + +L L +L + HN F P + L SL
Sbjct: 486 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY-KCLNSL 544
Query: 287 ERVRLDRNYLTGNISESFYIYP-NLTYIDLSQNNF 320
+ + N++ + + +P +L +++L+QN+F
Sbjct: 545 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 597 IIRATNDFDDEHCIGKGGQGSVYMSK--LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKA 654
+ RA ++ IG+G G V+ ++ G +A+K+ GE + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-GEEGMPLSTIREVAV 64
Query: 655 LTEIW---HRNIVKVYGFCLHVR-----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR 706
L + H N+V+++ C R L +V+E+ L L + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVPTETI 122
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
+M+ ++ L ++H+ +VHRD+ +N+L+ + ++DFG+A+ + T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTS 178
Query: 767 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 804
+ T Y APE+ D++S G + E+ + K
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 604 FDDEHCIGKGGQGSVY-MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN 662
+D +G G G V+ +++ A+G A K +P + ++ E++ ++ + H
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRHPT 109
Query: 663 IVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
+V ++ + ++YE+ L ++++ + + ++ + L +MH
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 723 DCFPPIVHRDISSKNVLLDFE--NEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
+ + VH D+ +N++ + NE + DFG+ L P S GT + APE+A
Sbjct: 168 NNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-TTGTAEFAAPEVAE 223
Query: 781 TMKVTEKCDVYSFGVLALEVIKGKHP 806
V D++S GVL+ ++ G P
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L + + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ +N ++DFG+A+ +
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 767 LAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEV 800
G ++APE + T + DV+SFGVL E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 56/303 (18%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
+ IGKG G V+ K GE +AVK F S E ++ +E E+ + H NI+
Sbjct: 14 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENIL-- 66
Query: 667 YGFCLH-------VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDA 716
GF L++V +Y + SL L+ MIK
Sbjct: 67 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASG 118
Query: 717 LSYMHNDCF-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ 765
L+++H + P I HRD+ SKN+L+ ++D G+A ++ DS+ T
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 176
Query: 766 ELAGTYGYVAPEL---AYTMKVTE---KCDVYSFGVLALEV-----IKGKHPR------D 808
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 236
Query: 809 FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVC 868
+ S + ++ L P +P ++ + L + ++ C N +R T ++
Sbjct: 237 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 295
Query: 869 QLL 871
+ L
Sbjct: 296 KTL 298
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 56/303 (18%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
+ IGKG G V+ K GE +AVK F S E ++ +E E+ + H NI+
Sbjct: 9 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENIL-- 61
Query: 667 YGFCLH-------VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDA 716
GF L++V +Y + SL L+ MIK
Sbjct: 62 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASG 113
Query: 717 LSYMHNDCF-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ 765
L+++H + P I HRD+ SKN+L+ ++D G+A ++ DS+ T
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 171
Query: 766 ELAGTYGYVAPEL---AYTMKVTE---KCDVYSFGVLALEV-----IKGKHPR------D 808
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 231
Query: 809 FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVC 868
+ S + ++ L P +P ++ + L + ++ C N +R T ++
Sbjct: 232 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 290
Query: 869 QLL 871
+ L
Sbjct: 291 KTL 293
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 56/303 (18%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
+ IGKG G V+ K GE +AVK F S E ++ +E E+ + H NI+
Sbjct: 11 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENIL-- 63
Query: 667 YGFCLH-------VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDA 716
GF L++V +Y + SL L+ MIK
Sbjct: 64 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASG 115
Query: 717 LSYMHNDCF-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ 765
L+++H + P I HRD+ SKN+L+ ++D G+A ++ DS+ T
Sbjct: 116 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 173
Query: 766 ELAGTYGYVAPEL---AYTMKVTE---KCDVYSFGVLALEV-----IKGKHPR------D 808
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 233
Query: 809 FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVC 868
+ S + ++ L P +P ++ + L + ++ C N +R T ++
Sbjct: 234 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 292
Query: 869 QLL 871
+ L
Sbjct: 293 KTL 295
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 33/240 (13%)
Query: 584 SVLTFEGKIIYEEIIRATNDFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEM 642
S +F G+ +E++ + D +G+G V L + + AVK PG +
Sbjct: 2 STDSFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHI 53
Query: 643 TFQQEFLNEVKALTEIW-HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNL 701
+ EV+ L + HRN++++ F ++V+E + S ILS+ ++
Sbjct: 54 --RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHF 108
Query: 702 GWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLK 758
+++ + AL ++HN I HRD+ +N+L + N+ + DFG+ +K
Sbjct: 109 NELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIK 165
Query: 759 --PDSS--NWTEL---AGTYGYVAPEL--AYTMKVT---EKCDVYSFGVLALEVIKGKHP 806
D S + EL G+ Y+APE+ A++ + + ++CD++S GV+ ++ G P
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY- 667
+G GG G V+ + + +A+KK P + + L E+K + + H NIVKV+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSV---KHALREIKIIRRLDHDNIVKVFE 75
Query: 668 -------------GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIV 714
G + ++IV EY + LA +L + +++G
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRG-- 132
Query: 715 DALSYMHNDCFPPIVHRDISSKNVLLDFENEA-HVSDFGIAKFLKPDSSNWTELAG---T 770
L Y+H+ ++HRD+ N+ ++ E+ + DFG+A+ + P S+ L+ T
Sbjct: 133 --LKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 771 YGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGK 804
Y +P L + T+ D+++ G + E++ GK
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 24/260 (9%)
Query: 561 KFQRR--KNDSQTQQSSPGNSRGLLSVLTFEGKIIYEEIIRATNDFDDEHCIGKGGQGSV 618
K +RR N+S+ S N + LT + + +Y + +R +++ +G G G V
Sbjct: 108 KGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALR--DEYIMSKTLGSGACGEV 165
Query: 619 YMS------KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH 672
++ K + II+ +KF E E++ L ++ H I+K+ F
Sbjct: 166 KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FD 224
Query: 673 VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRD 732
+IV E + L + + K T ++ + ++ A+ Y+H + I+HRD
Sbjct: 225 AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRD 278
Query: 733 ISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY---TMKVTE 786
+ +NVLL + E ++DFG +K L ++S L GT Y+APE+ T
Sbjct: 279 LKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNR 337
Query: 787 KCDVYSFGVLALEVIKGKHP 806
D +S GV+ + G P
Sbjct: 338 AVDCWSLGVILFICLSGYPP 357
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 56/303 (18%)
Query: 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKV 666
+ IGKG G V+ K GE +AVK F S E ++ +E E+ + H NI+
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENIL-- 60
Query: 667 YGFCLH-------VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIK---GIVDA 716
GF L++V +Y + SL L+ MIK
Sbjct: 61 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASG 112
Query: 717 LSYMHNDCF-----PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT------ 765
L+++H + P I HRD+ SKN+L+ ++D G+A ++ DS+ T
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 170
Query: 766 ELAGTYGYVAPEL---AYTMKVTE---KCDVYSFGVLALEV-----IKGKHPR------D 808
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230
Query: 809 FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVC 868
+ S + ++ L P +P ++ + L + ++ C N +R T ++
Sbjct: 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 289
Query: 869 QLL 871
+ L
Sbjct: 290 KTL 292
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y+AP + + + D ++ GVL E+ G P
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 708 NMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNW 764
+ I+ I++A+ + H +VHRD+ +N+LL + + ++DFG+A ++ D W
Sbjct: 107 HCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW 163
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVL 796
AGT GY++PE+ + D+++ GV+
Sbjct: 164 FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVI 195
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L + + L
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK------FLKPD 760
++ + + Y+ + +HRD++++NVL+ +N ++DFG+A+ + K
Sbjct: 194 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
++ + ++APE + T + DV+SFGVL E+
Sbjct: 251 TNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 610 IGKGGQGSVYM-SKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G G V+ + A+G +A K + M ++E NE+ + ++ H N++++Y
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTR---GMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ +V EY L + +++ NL + +K I + + +MH I
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESY--NLTELDTILFMKQICEGIRHMHQ---MYI 208
Query: 729 VHRDISSKNVLLDFENEAHVS--DFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 786
+H D+ +N+L + + DFG+A+ KP GT ++APE+ V+
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVSF 267
Query: 787 KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLN 819
D++S GV+A ++ G P F+ +LN
Sbjct: 268 PTDMWSVGVIAYMLLSGLSP--FLGDNDAETLN 298
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 708 NMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNW 764
+ I+ I++++++ H IVHRD+ +N+LL +++ ++DFG+A ++ D W
Sbjct: 107 HCIQQILESVNHCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW 163
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
AGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ L + + + L + L R ++ ++ + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---I 147
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+++ + + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 789 DVYSFGVLALEVIKG 803
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 38/223 (17%)
Query: 610 IGKGGQGSVY------MSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRN 662
+G G G V +SK +AVK + + ++ ++E+K +T++ H N
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK--ADSSEREALMSELKMMTQLGSHEN 110
Query: 663 IVKVYGFCLHVRHLFIVYEYFKMCSLAVIL----------SNDAA----AKNLGWTRRMN 708
IV + G C +++++EY C +L S D K L +N
Sbjct: 111 IVNLLGACTLSGPIYLIFEY---CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 709 MIKGIVDALSYMHNDC-------FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS 761
++ D L + + F VHRD++++NVL+ + DFG+A+ + D
Sbjct: 168 VLT-FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD- 225
Query: 762 SNWTELAGT---YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
SN+ ++APE + T K DV+S+G+L E+
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 708 NMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNW 764
+ I+ I++++++ H IVHRD+ +N+LL +++ ++DFG+A ++ D W
Sbjct: 107 HCIQQILESVNHCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW 163
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
AGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 112/282 (39%), Gaps = 25/282 (8%)
Query: 595 EEIIRATNDFDDEHCIGKGGQGSVYMSKLASGE----IIAVKKFHSPLPGEMTFQQEFLN 650
E+++ F +GKG GSV ++L + +AVK + + + EFL
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE-EFLR 74
Query: 651 EVKALTEIWHRNIVKVYGFCLHVRHL------FIVYEYFKMCSLAVILSNDAAAKNLGWT 704
E + E H ++ K+ G L R ++ + K L L +N
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNW 764
+++ +VD M +HRD++++N +L + V+DFG+++ +
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194
Query: 765 TELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSFSSLNLN 821
A ++A E T DV++FGV E++ +G+ P I + N
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YNYL 252
Query: 822 IALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPT 863
I + + P P V+D + C +P+ RP+
Sbjct: 253 IGGNRLKQP--PECMEEVYD-------LMYQCWSADPKQRPS 285
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 24/260 (9%)
Query: 561 KFQRR--KNDSQTQQSSPGNSRGLLSVLTFEGKIIYEEIIRATNDFDDEHCIGKGGQGSV 618
K +RR N+S+ S N + LT + + +Y + +R +++ +G G G V
Sbjct: 94 KGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALR--DEYIMSKTLGSGACGEV 151
Query: 619 YMS------KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH 672
++ K + II+ +KF E E++ L ++ H I+K+ F
Sbjct: 152 KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FD 210
Query: 673 VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRD 732
+IV E + L + + K T ++ + ++ A+ Y+H + I+HRD
Sbjct: 211 AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRD 264
Query: 733 ISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY---TMKVTE 786
+ +NVLL + E ++DFG +K L ++S L GT Y+APE+ T
Sbjct: 265 LKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNR 323
Query: 787 KCDVYSFGVLALEVIKGKHP 806
D +S GV+ + G P
Sbjct: 324 AVDCWSLGVILFICLSGYPP 343
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 23/205 (11%)
Query: 610 IGKGGQG-SVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G G + M S E++AVK + ++E +N + H NIV+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 81
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L HL IV EY L + N A + ++ +SY H +
Sbjct: 82 VILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCHA---MQV 135
Query: 729 VHRDISSKNVLLDFENEAH--VSDFGIAK----FLKPDSSNWTELAGTYGYVAPELAYTM 782
HRD+ +N LLD + DFG +K +P S+ GT Y+APE+
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLLKK 190
Query: 783 KVTEK-CDVYSFGVLALEVIKGKHP 806
+ K DV+S GV ++ G +P
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI+ + +H+++V E + L L K ++ I + Y
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGKTVEY 136
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENE----AHVSDFGIAKFLKPDSSNWTELAGTYGYVA 775
+H+ +VHRD+ N+L E+ + DFG AK L+ ++ T +VA
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVA 193
Query: 776 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
PE+ E CD++S G+L ++ G P
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ L + + + L + L R ++ ++ + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---I 147
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+++ + + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 789 DVYSFGVLALEVIKG 803
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK-FLKPDSSNWTELAGTY 771
IV AL ++H I++RDI +N+LLD ++DFG++K F+ ++ + GT
Sbjct: 168 IVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI 224
Query: 772 GYVAPELAYTMKV--TEKCDVYSFGVLALEVIKGKHP 806
Y+AP++ + D +S GVL E++ G P
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 669 FCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
+ ++IV E VI L R ++ ++ + ++H+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 782
I+HRD+ N+++ + + DFG+A+ E+ Y Y APE+ M
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-YRAPEVILGM 200
Query: 783 KVTEKCDVYSFGVLALEVIKG 803
E D++S G + E+IKG
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ Y +L L N + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 83/205 (40%), Gaps = 23/205 (11%)
Query: 610 IGKGGQG-SVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G G + M S E++AVK ++E +N + H NIV+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINH----RSLRHPNIVRFKE 82
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L HL IV EY L + N A + ++ +SY H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCHA---MQV 136
Query: 729 VHRDISSKNVLLDFENEAH--VSDFGIAK----FLKPDSSNWTELAGTYGYVAPELAYTM 782
HRD+ +N LLD + DFG +K +P S+ GT Y+APE+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLLKK 191
Query: 783 KVTEK-CDVYSFGVLALEVIKGKHP 806
+ K DV+S GV ++ G +P
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 644 FQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLG 702
++ L EV L ++ H NI+++ F+V++ K L L+
Sbjct: 53 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 112
Query: 703 WTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS 762
+ M + ++ AL ++ IVHRD+ +N+LLD + ++DFG + L P
Sbjct: 113 TRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GE 165
Query: 763 NWTELAGTYGYVAPE-LAYTMK-----VTEKCDVYSFGVLALEVIKGKHP 806
E+ GT Y+APE + +M ++ D++S GV+ ++ G P
Sbjct: 166 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L + + L
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ +N ++DFG+A+ +
Sbjct: 142 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 767 LAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
G ++APE + T + DV+SFGVL E+
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 235
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAA-------------AKNLGWTRR 706
H+NI+ + G C L+++ EY +L L + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ +N ++DFG+A+ +
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 767 LAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
G ++APE + T + DV+SFGVL E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 610 IGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN--IVKVY 667
IG GG V+ +I A+K + T + NE+ L ++ + I+++Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 122
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP 727
+ + +++++V E C + S K++ R + K +++A+ +H
Sbjct: 123 DYEITDQYIYMVME----CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--- 175
Query: 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVT 785
IVH D+ N L+ + + DFGIA ++PD+++ + G Y+ PE M +
Sbjct: 176 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS 234
Query: 786 EK-----------CDVYSFGVLALEVIKGKHP-RDFISSMSFSSLNLNIALDEMLDPRLP 833
+ DV+S G + + GK P + I+ +S L+ +D + P
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----KLHAIIDPNHEIEFP 290
Query: 834 T-PSRNVHDKLISIVEVTISCVDENPESR 861
P +++ D V C+ +P+ R
Sbjct: 291 DIPEKDLQD-------VLKCCLKRDPKQR 312
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 610 IGKGGQG-SVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G G + M + E++AVK + ++E +N + H NIV+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L HL IV EY L + N A + ++ +SY H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYAHA---MQV 136
Query: 729 VHRDISSKNVLLDFENEAH--VSDFGIAK----FLKPDSSNWTELAGTYGYVAPELAYTM 782
HRD+ +N LLD ++DFG +K +P S+ GT Y+APE+
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-----VGTPAYIAPEVLLKK 191
Query: 783 KVTEK-CDVYSFGVLALEVIKGKHP 806
+ K DV+S GV ++ G +P
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ L + + + L + L R ++ ++ + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---I 147
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+++ + + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 789 DVYSFGVLALEVIKG 803
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYG 772
IV Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 773 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
+APE+ + + D ++ GVL E+ G P
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L + + L
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ +N ++DFG+A+ +
Sbjct: 145 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 767 LAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
G ++APE + T + DV+SFGVL E+
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 238
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSY 719
H NI+ + +H+++V E + L L K ++ I + Y
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGKTVEY 136
Query: 720 MHNDCFPPIVHRDISSKNVLLDFENE----AHVSDFGIAKFLKPDSSNWTELAGTYGYVA 775
+H+ +VHRD+ N+L E+ + DFG AK L+ ++ T +VA
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVA 193
Query: 776 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
PE+ E CD++S G+L ++ G P
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L + + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ +N ++DFG+A+ +
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 767 LAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
G ++APE + T + DV+SFGVL E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L + + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ +N ++DFG+A+ +
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 767 LAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
G ++APE + T + DV+SFGVL E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L + + L
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ +N ++DFG+A+ +
Sbjct: 138 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 767 LAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
G ++APE + T + DV+SFGVL E+
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 90/238 (37%), Gaps = 20/238 (8%)
Query: 627 EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMC 686
I+A+K L + F+ E + + ++V ++ F L++
Sbjct: 60 RIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGV 119
Query: 687 SLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA 746
LA L L R + +++ I S + HRD+ +N+L+ ++ A
Sbjct: 120 DLAAXLRRQGP---LAPPRAVAIVRQIG---SALDAAHAAGATHRDVKPENILVSADDFA 173
Query: 747 HVSDFGIAKFLKPDSSNWTELAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVIKG 803
++ DFGIA T+L T G Y APE T + D+Y+ + E + G
Sbjct: 174 YLVDFGIASATT--DEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
Query: 804 KHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESR 861
P +S ++N A +P PS ++ V +NPE R
Sbjct: 232 SPPYQG-DQLSVXGAHINQA--------IPRPSTVRPGIPVAFDAVIARGXAKNPEDR 280
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ EY +L L + + L
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ +N ++DFG+A+ +
Sbjct: 146 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 767 LAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
G ++APE + T + DV+SFGVL E+
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 239
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ L + + + L + L R ++ ++ + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 147
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 788
+HRD+ N+++ + + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 789 DVYSFGVLALEVIKG 803
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 26/161 (16%)
Query: 660 HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILS-------------NDAAAKNLGWTRR 706
H+NI+ + G C L+++ Y +L L N + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 707 MNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTE 766
++ + + Y+ + +HRD++++NVL+ N ++DFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 767 LAGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVI 801
T ++APE + T + DV+SFGVL E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 14/227 (6%)
Query: 275 GPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQN--NFYGEIS-SDWGRC 331
G P L+ L SL+R+ N SE P+L ++DLS+N +F G S SD+G
Sbjct: 317 GQFPTLK-LKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGT- 372
Query: 332 PKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHI--VGEIPIELGKLNFFIKLVLAH 389
L LD S N + +G QL LD +++ + E + L N I L ++H
Sbjct: 373 TSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNL-IYLDISH 430
Query: 390 NQLSGQLSPKLGSLVQLEHLDLSSNRLS-NSIPKSLGNLELIHLSELDLSRNFLREAIPS 448
+ L LE L ++ N N +P EL +L+ LDLS+ L + P+
Sbjct: 431 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT--ELRNLTFLDLSQCQLEQLSPT 488
Query: 449 QICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIP 495
+ SL+ LN++ N L + F+++ L I + N S P
Sbjct: 489 AFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 301 SESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGV 360
S SF+ +P L +DLS+ + LSTL + N I S L
Sbjct: 45 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 104
Query: 361 LDLSSNHIVGEIPIELGKLNFFIKLVLAHNQL-SGQLSPKLGSLVQLEHLDLSSNRL 416
L ++ +G L +L +AHN + S +L +L LEHLDLSSN++
Sbjct: 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 229 IPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG-PIPILRNLTSLE 287
+P L NLT+L+L + L P + +L L +L + NQ + P I LTSL+
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQ 521
Query: 288 RVRLDRN 294
++ L N
Sbjct: 522 KIWLHTN 528
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 76/203 (37%), Gaps = 10/203 (4%)
Query: 227 GSIPISMGNLSNLTYLNLFENSLS--GAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLT 284
G S +L +L +L+L N LS G L L L F G I + N
Sbjct: 337 GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS---FNGVITMSSNFL 393
Query: 285 SLERVR-LDRNYLTGNISESFYIY---PNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFS 340
LE++ LD + F ++ NL Y+D+S + + + L L +
Sbjct: 394 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 453
Query: 341 INNITGNVPPEI-GHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPK 399
N+ N P+I L LDLS + P L+ L +A NQL
Sbjct: 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGI 513
Query: 400 LGSLVQLEHLDLSSNRLSNSIPK 422
L L+ + L +N S P+
Sbjct: 514 FDRLTSLQKIWLHTNPWDCSCPR 536
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Query: 708 NMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA---HVSDFGIAKFLKPDSSNW 764
+ I I+++++++H IVHRD+ +N+LL + + ++DFG+A ++ + W
Sbjct: 134 HCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAW 190
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
AGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 101/241 (41%), Gaps = 35/241 (14%)
Query: 584 SVLTFEGKIIYEEIIRATND-FDDEHCIGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGE 641
S+++ +E R D F E G+G G+V + K S G +A+KK + +
Sbjct: 4 SMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKK----VIQD 59
Query: 642 MTFQQEFLNEVKALTEIWHRNIVKV--YGFCLHVR-----HLFIVYEY----FKMCSLAV 690
F+ L ++ L + H NIV++ Y + L R +L +V EY C
Sbjct: 60 PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNY 119
Query: 691 ILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI--VHRDISSKNVLLDFENEA-- 746
A L +I+ I +H P + HRDI NVL+ NEA
Sbjct: 120 YRRQVAPPPILIKVFLFQLIRSI----GCLH---LPSVNVCHRDIKPHNVLV---NEADG 169
Query: 747 --HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKG 803
+ DFG AK L P N + Y Y APEL + T D++S G + E++ G
Sbjct: 170 TLKLCDFGSAKKLSPSEPNVAYICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
Query: 804 K 804
+
Sbjct: 229 E 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKXVNHKNIISLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 91 VFTPQKTL----EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG 146
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 842 K 842
+
Sbjct: 263 R 263
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 356 SQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSN- 414
+QL LDL++ H+ G +P + LN KLVL+ N + L HL + N
Sbjct: 275 TQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNV 333
Query: 415 ---RLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIP 471
L + LGNL+ + LS D+ + + Q+ + L+ LNLSHN GL
Sbjct: 334 KKLHLGVGCLEKLGNLQTLDLSHNDIEAS---DCCSLQLKNLSHLQTLNLSHNEPLGLQS 390
Query: 472 SCFEKMNGLLHIDISYNELRGSIPNS 497
F++ L +D+++ L + P S
Sbjct: 391 QAFKECPQLELLDLAFTRLHINAPQS 416
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 116/302 (38%), Gaps = 61/302 (20%)
Query: 242 LNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNIS 301
LNL E+ S ++ +L L L +G ++ L L+++ L N+
Sbjct: 256 LNLQEHRFSDISSTTFQCFTQLQELDLTATHLKGLPSGMKGLNLLKKLVLSVNHFDQLCQ 315
Query: 302 ESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVL 361
S +P+LT++ + N ++ G KL GN L L
Sbjct: 316 ISAANFPSLTHLYIRGN--VKKLHLGVGCLEKL-----------GN----------LQTL 352
Query: 362 DLSSNHIVGE--IPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNS 419
DLS N I ++L L+ L L+HN+ G S QLE LDL+ RL +
Sbjct: 353 DLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHIN 412
Query: 420 IPKS-LGNLELIH----------------------LSELDLSRNFLREAIPSQICIMQ-- 454
P+S NL + L L+L N ++ ++ ++Q
Sbjct: 413 APQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTV 472
Query: 455 -SLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFKDAPIEALQGNKG 513
SLE L LS L + F + + H+D+S+N L I++L KG
Sbjct: 473 GSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCD----------SIDSLSHLKG 522
Query: 514 LY 515
+Y
Sbjct: 523 IY 524
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 39/207 (18%)
Query: 280 LRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDF 339
L+NL+ L+ + L N G S++F P L +DL+ + + + + P +
Sbjct: 369 LKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLA----FTRLHINAPQSPFQNLHFL 424
Query: 340 SINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPI--------------ELGKLNFFIK- 384
+ N+T LD S+ H++ +P+ + K N
Sbjct: 425 QVLNLT------------YCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTV 472
Query: 385 -----LVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSR 439
L+L+ L SL ++ H+DLS N L+ SL +L+ I+ L+L+
Sbjct: 473 GSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCDSIDSLSHLKGIY---LNLAA 529
Query: 440 NFLREAIPSQICIMQSLEKLNLSHNSL 466
N + P + I+ +NLSHN L
Sbjct: 530 NSINIISPRLLPILSQQSTINLSHNPL 556
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 610 IGKGGQGSVYMSKLAS--GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
+G+G G VY + GE I V + +++F++E + + H +IVK+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILS-NDAAAKNLGWTRRMNMIKGIVDALSYMHN-DCF 725
G + +I+ E + L L N + K L T + ++ I A++Y+ + +C
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQ-ICKAMAYLESINC- 130
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD---SSNWTELAGTYGYVAPELAYTM 782
VHRDI+ +N+L+ + DFG++++++ + ++ T L +++PE
Sbjct: 131 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFR 185
Query: 783 KVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
+ T DV+ F V E++ GK P ++ + I + E D RLP P
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV------IGVLEKGD-RLPKPD----- 233
Query: 842 KLISIVEVTI--SCVDENPESRPTMQK-VCQL 870
L V T+ C D +P RP + VC L
Sbjct: 234 -LCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 610 IGKGGQGSVYMSKLAS--GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
+G+G G VY + GE I V + +++F++E + + H +IVK+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILS-NDAAAKNLGWTRRMNMIKGIVDALSYMHN-DCF 725
G + +I+ E + L L N + K L T + ++ I A++Y+ + +C
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQ-ICKAMAYLESINC- 134
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD---SSNWTELAGTYGYVAPELAYTM 782
VHRDI+ +N+L+ + DFG++++++ + ++ T L +++PE
Sbjct: 135 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFR 189
Query: 783 KVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
+ T DV+ F V E++ GK P ++ + I + E D RLP P
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV------IGVLEKGD-RLPKPD----- 237
Query: 842 KLISIVEVTI--SCVDENPESRPTMQK-VCQL 870
L V T+ C D +P RP + VC L
Sbjct: 238 -LCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 645 QQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWT 704
Q+ E + + H NIV+++ H +++ F + + + + A +
Sbjct: 65 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI---FDLVTGGELFEDIVAREYYSEA 121
Query: 705 RRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE---NEAHVSDFGIAKFLKPDS 761
+ I+ I++A+ + H +VHRD+ +N+LL + ++DFG+A ++ +
Sbjct: 122 DASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 178
Query: 762 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
W AGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 179 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 91
Query: 669 FCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
+ ++IV E VI L R ++ ++ + ++H+
Sbjct: 92 VFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLHS 145
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 782
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 146 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 783 KVTEKCDVYSFGVLALEVIKG 803
E D++S G + E+IKG
Sbjct: 202 GYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 669 FCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
+ ++IV E VI L R ++ ++ + ++H+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 782
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 783 KVTEKCDVYSFGVLALEVIKG 803
E D++S G + E+IKG
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 669 FCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
+ ++IV E VI L R ++ ++ + ++H+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 782
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 783 KVTEKCDVYSFGVLALEVIKG 803
E D++S G + E+IKG
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G G G V+ + A+G + K ++P P + + NE+ + ++ H ++ ++
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD---KYTVKNEISIMNQLHHPKLINLHD 115
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ ++ E+ L ++ A + +N ++ + L +MH I
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIA--AEDYKMSEAEVINYMRQACEGLKHMHEHS---I 170
Query: 729 VHRDISSKNVLLDFENEAHVS--DFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 786
VH DI +N++ + + + V DFG+A L PD A T + APE+ V
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIVDREPVGF 229
Query: 787 KCDVYSFGVLALEVIKGKHP 806
D+++ GVL ++ G P
Sbjct: 230 YTDMWAIGVLGYVLLSGLSP 249
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S TE T Y
Sbjct: 128 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYY 183
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 184 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKXVNHKNIISLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 91 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 144
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 145 -AGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 842 K 842
+
Sbjct: 263 R 263
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + G +AVKK P + T + E+ L + H+NI+ +
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ-THAKRAYRELVLLKCVNHKNIISLLN 88
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAK----NLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + + L R ++ ++ + ++H+
Sbjct: 89 VFTPQKTL----EEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS-- 142
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNW--TELAGTYGYVAPELAYTM 782
I+HRD+ N+++ + + DFG+A + S+N+ T T Y APE+ M
Sbjct: 143 -AGIIHRDLKPSNIVVKSDCTLKILDFGLA---RTASTNFMMTPYVVTRYYRAPEVILGM 198
Query: 783 KVTEKCDVYSFGVLALEVIKG 803
E D++S G + E++KG
Sbjct: 199 GYKENVDIWSVGCIMGELVKG 219
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 67/177 (37%), Gaps = 24/177 (13%)
Query: 26 LELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSI 85
L+L +NKLS + LT L LY++ N L G + L +++NKL
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALP 101
Query: 86 PPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXXXXXXXXXXPHSLGNLTNLAT 145
L NLA L LD N L S+P P +LT L
Sbjct: 102 IGVFDQLVNLAELRLDRNQLK-SLP-----------------------PRVFDSLTKLTY 137
Query: 146 LYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLS 202
L + N L + G L SL L+L N + L+ L TL LD N L
Sbjct: 138 LSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 69/180 (38%), Gaps = 25/180 (13%)
Query: 140 LTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTN 199
LT L LY+ N L G LK+L L +++N L NLA L LD N
Sbjct: 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119
Query: 200 SLSYSIPXXXXXXXXXXXXXXXYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRN 259
L S+P P +L+ LTYL+L N L +
Sbjct: 120 QLK-SLP-----------------------PRVFDSLTKLTYLSLGYNELQSLPKGVFDK 155
Query: 260 LVKLTILLLGHNQF-RGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQN 318
L L L L +NQ R P LT L+ ++LD N L +F L + L +N
Sbjct: 156 LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 65/169 (38%), Gaps = 3/169 (1%)
Query: 12 SIPSE-LRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRF 70
S+PS+ L L L L +NKL L NL TL++ N L G
Sbjct: 51 SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVN 110
Query: 71 FSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXXXXXXX 130
++L L N+L P +L+ L L L N L S+P
Sbjct: 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQL 169
Query: 131 XXXPH-SLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFN 178
P + LT L TL + +N L G +L+ L LQL EN ++
Sbjct: 170 KRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 344 ITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSL 403
I N+P + LDL SN + +L L L N+L + L
Sbjct: 31 IPSNIPADTKK------LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKEL 84
Query: 404 VQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSH 463
LE L ++ N+L ++P + + +L++L+EL L RN L+ P + L L+L +
Sbjct: 85 KNLETLWVTDNKLQ-ALPIGVFD-QLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGY 142
Query: 464 NSLSGLIPSCFEKMNGLLHIDISYNELR 491
N L L F+K+ L + + N+L+
Sbjct: 143 NELQSLPKGVFDKLTSLKELRLYNNQLK 170
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 80/217 (36%), Gaps = 54/217 (24%)
Query: 223 NKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG-PIPILR 281
NKLS + L+ L L L +N L ++ L L L + N+ + PI +
Sbjct: 47 NKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFD 106
Query: 282 NLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSI 341
L +L +RLDRN L F LTY+ L Y E+ S PK
Sbjct: 107 QLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLG----YNELQS----LPK-------- 150
Query: 342 NNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLG 401
GV D KL +L L +NQL
Sbjct: 151 -----------------GVFD---------------KLTSLKELRLYNNQLKRVPEGAFD 178
Query: 402 SLVQLEHLDLSSNRLSNSIPK----SLGNLELIHLSE 434
L +L+ L L +N+L +P+ SL L+++ L E
Sbjct: 179 KLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQE 214
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 708 NMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF---ENEAHVSDFGIAKFLKPDSSNW 764
+ +K I++A++Y+H + IVHRD+ +N+L + ++DFG++K ++
Sbjct: 152 DAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 765 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
T + GT GY APE+ + D++S G++ ++ G P
Sbjct: 209 T-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 84 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 143
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 144 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 199
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 200 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKXVNHKNIISLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 91 VFTPQKTL----EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHS-- 144
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 145 -AGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 842 K 842
+
Sbjct: 263 R 263
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 76 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 136 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 191
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 192 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 74 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 134 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 189
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 190 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 83
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 84 VFTPQKTL----EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG 139
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 140 ---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 842 K 842
+
Sbjct: 256 R 256
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 120 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 179
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 180 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 235
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 236 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 174 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 229
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 91 VFTPQKTL----EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG 146
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 842 K 842
+
Sbjct: 263 R 263
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 75 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 135 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 190
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 191 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EAHVSDFGIAKFLKPDSSNWTELA 768
I + Y+H +VHRD+ N+L E+ + DFG AK L+ ++
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 769 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
T +VAPE+ CD++S GVL ++ G P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 610 IGKGGQGSVYMS------KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G G G V ++ K + +II+ +KF E E++ L ++ H I
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
+K+ F +IV E + L + + K T ++ + ++ A+ Y+H +
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN 139
Query: 724 CFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
I+HRD+ +NVLL + E ++DFG +K L ++S L GT Y+APE+
Sbjct: 140 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 195
Query: 781 TMKVT---EKCDVYSFGVLALEVIKGKHP 806
++ D +S GV+ + G P
Sbjct: 196 SVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 346 GNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQ 405
+VP I ++Q +L L N I P L +L L NQL SL Q
Sbjct: 32 ASVPAGIPTNAQ--ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89
Query: 406 LEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNS 465
L LDL +N+L+ +P ++ + L+HL EL + N L E +P I + L L L N
Sbjct: 90 LTVLDLGTNQLT-VLPSAVFD-RLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQ 146
Query: 466 LSGLIPSCFEKMNGLLH 482
L + F++++ L H
Sbjct: 147 LKSIPHGAFDRLSSLTH 163
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 5/149 (3%)
Query: 31 NKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSL- 89
+K S+P G TN LY+H N ++ PG + +L L +N+L G++P +
Sbjct: 28 SKRHASVP--AGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF 84
Query: 90 GNLSNLATLYLDTNSLSNSIPSEXXXXXXXXXXXXXXXXXXXXXPHSLGNLTNLATLYIY 149
+L+ L L L TN L+ +PS P + LT+L L +
Sbjct: 85 DSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALD 143
Query: 150 SNSLSASILGKIGNLKSLSNLQLSENNFN 178
N L + G L SL++ L N ++
Sbjct: 144 QNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172
Score = 37.7 bits (86), Expect = 0.027, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSL-GNLTNLATLYIHTNSLSGSIP 62
+++N + P +L +L +L LG+N+L G++P + +LT L L + TN L+
Sbjct: 47 LHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPS 105
Query: 63 GEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIP 110
+L + NKL+ +P + L++L L LD N L SIP
Sbjct: 106 AVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL-KSIP 151
Score = 30.0 bits (66), Expect = 5.5, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 26/150 (17%)
Query: 170 LQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPXXXXXXXXXXXXXXXYNKLSGSI 229
L L +N P +L NL LYL +N L G++
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-------------------------GAL 79
Query: 230 PISM-GNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLER 288
P+ + +L+ LT L+L N L+ + LV L L + N+ + LT L
Sbjct: 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTH 139
Query: 289 VRLDRNYLTGNISESFYIYPNLTYIDLSQN 318
+ LD+N L +F +LT+ L N
Sbjct: 140 LALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 112/240 (46%), Gaps = 33/240 (13%)
Query: 584 SVLTFEGKIIYEEIIRATNDFDDEHCIGKGGQGSVYMS-KLASGEIIAVKKFHSPLPGEM 642
S +F G+ +E++ + D +G+G V L + + AVK PG +
Sbjct: 2 STDSFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHI 53
Query: 643 TFQQEFLNEVKALTEIW-HRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNL 701
+ EV+ L + HRN++++ F ++V+E + S ILS+ ++
Sbjct: 54 --RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHF 108
Query: 702 GWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLK 758
+++ + AL ++HN I HRD+ +N+L + N+ + DF + +K
Sbjct: 109 NELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165
Query: 759 --PDSS--NWTEL---AGTYGYVAPEL--AYTMKVT---EKCDVYSFGVLALEVIKGKHP 806
D S + EL G+ Y+APE+ A++ + + ++CD++S GV+ ++ G P
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 128 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 183
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 184 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 69 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 128
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 129 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 184
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 185 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 610 IGKGGQGSVYMS------KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G G G V ++ K + +II+ +KF E E++ L ++ H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
+K+ F +IV E + L + + K T ++ + ++ A+ Y+H +
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN 133
Query: 724 CFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
I+HRD+ +NVLL + E ++DFG +K L ++S L GT Y+APE+
Sbjct: 134 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 189
Query: 781 TMKVT---EKCDVYSFGVLALEVIKGKHP 806
++ D +S GV+ + G P
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 610 IGKGGQGSVYMSKLA--SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVY 667
+G+G G VY GE I V + +++F++E + + H +IVK+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 668 GFCLHVRHLFIVYEYFKMCSLAVILS-NDAAAKNLGWTRRMNMIKGIVDALSYMHN-DCF 725
G + +I+ E + L L N + K L T + ++ I A++Y+ + +C
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQ-ICKAMAYLESINC- 146
Query: 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD---SSNWTELAGTYGYVAPELAYTM 782
VHRDI+ +N+L+ + DFG++++++ + ++ T L +++PE
Sbjct: 147 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFR 201
Query: 783 KVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
+ T DV+ F V E++ GK P ++ + I + E D RLP P
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV------IGVLEKGD-RLPKPD----- 249
Query: 842 KLISIVEVTI--SCVDENPESRPTMQK-VCQL 870
L V T+ C D +P RP + VC L
Sbjct: 250 -LCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 610 IGKGGQGSVYMS------KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G G G V ++ K + +II+ +KF E E++ L ++ H I
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
+K+ F +IV E + L + + K T ++ + ++ A+ Y+H +
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN 132
Query: 724 CFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
I+HRD+ +NVLL + E ++DFG +K L ++S L GT Y+APE+
Sbjct: 133 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 188
Query: 781 TMKVT---EKCDVYSFGVLALEVIKGKHP 806
++ D +S GV+ + G P
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 337 LDFSINNITGNVPPEIGHSSQLGVLDLSSNHI-----VGEIPIELGKLNFFIKLVLAHNQ 391
LDFS N +T V GH ++L L L N + + E+ ++ L +L ++ N
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQ---QLDISQNS 385
Query: 392 LSGQLSPKLGSLVQ-LEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQI 450
+S S + L L++SSN L+++I + L + LDL N ++ +IP Q+
Sbjct: 386 VSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPP----RIKVLDLHSNKIK-SIPKQV 440
Query: 451 CIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIP 495
+++L++LN++ N L + F+++ L I + N S P
Sbjct: 441 VKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 282 NLTSLERVRLDRNYLT--GNISESFYIYPNLTYIDLSQNNF-YGEISSDWGRCPKLSTLD 338
+LT LE + L N L I+E +L +D+SQN+ Y E D L +L+
Sbjct: 346 HLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405
Query: 339 FSINNITGNV----PPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSG 394
S N +T + PP I VLDL SN I IP ++ KL +L +A NQL
Sbjct: 406 MSSNILTDTIFRCLPPRIK------VLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKS 458
Query: 395 QLSPKLGSLVQLEHLDLSSNRLSNSIPK 422
L L+ + L +N S P+
Sbjct: 459 VPDGIFDRLTSLQKIWLHTNPWDCSCPR 486
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 10/65 (15%)
Query: 408 HLDLSSNRLSNSIPKSLGNLELIHLSELD---LSRNFLRE--AIPSQICIMQSLEKLNLS 462
HLD S+N L++++ ++ G HL+EL+ L N L+E I M+SL++L++S
Sbjct: 328 HLDFSNNLLTDTVFENCG-----HLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDIS 382
Query: 463 HNSLS 467
NS+S
Sbjct: 383 QNSVS 387
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 377 GKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELD 436
K++ F+ L ++N L+ + G L +LE L L N+L + ++ L +LD
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380
Query: 437 LSRNFLREAIPSQIC-IMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIP 495
+S+N + C +SL LN+S N L+ I C +L D+ N+++ SIP
Sbjct: 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVL--DLHSNKIK-SIP 437
Query: 496 NSTTFKDAPIEALQ 509
+EALQ
Sbjct: 438 KQV----VKLEALQ 447
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 12 SIPSELRNLKSLSDLELGNNKLSGSIPHSL-GNLTNLATLYIHTNSLSGSIP 62
SIP ++ L++L +L + +N+L S+P + LT+L +++HTN S P
Sbjct: 435 SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 409 LDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSG 468
+D S N L + +PK L I L++S+N++ E S I + L L +SHN +
Sbjct: 5 VDRSKNGLIH-VPKDLSQKTTI----LNISQNYISELWTSDILSLSKLRILIISHNRIQY 59
Query: 469 LIPSCFEKMNGLLHIDISYNEL 490
L S F+ L ++D+S+N+L
Sbjct: 60 LDISVFKFNQELEYLDLSHNKL 81
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 27/142 (19%)
Query: 240 TYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG-PIPILRNLTSLERVRLDRNYLTG 298
T LN+ +N +S + +L KL IL++ HN+ + I + + LE + L N L
Sbjct: 24 TILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL-- 81
Query: 299 NISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQL 358
+ S + NL ++DLS N F P + E G+ SQL
Sbjct: 82 -VKISCHPTVNLKHLDLSFNAF--------DALP---------------ICKEFGNMSQL 117
Query: 359 GVLDLSSNHIVGEIPIELGKLN 380
L LS+ H+ + + LN
Sbjct: 118 KFLGLSTTHLEKSSVLPIAHLN 139
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 10/162 (6%)
Query: 26 LELGNNKLSGSIPHSLGNLTNLATLYIHTNSLS--GSIPGEIGNFRFFSDLELSNNKLSG 83
L+ NN L+ ++ + G+LT L TL + N L I + L++S N S
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQN--SV 386
Query: 84 SIPPSLGNLS---NLATLYLDTNSLSNSIPSEXXXXXXXXXXXXXXXXXXXXXPHSLGNL 140
S G+ S +L +L + +N L+++I P + L
Sbjct: 387 SYDEKKGDCSWTKSLLSLNMSSNILTDTI---FRCLPPRIKVLDLHSNKIKSIPKQVVKL 443
Query: 141 TNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIP 182
L L + SN L + G L SL + L N ++ S P
Sbjct: 444 EALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 610 IGKGGQGSVYMS------KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G G G V ++ K + +II+ +KF E E++ L ++ H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
+K+ F +IV E + L + + K T ++ + ++ A+ Y+H +
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN 133
Query: 724 CFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
I+HRD+ +NVLL + E ++DFG +K L ++S L GT Y+APE+
Sbjct: 134 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 189
Query: 781 TMKVT---EKCDVYSFGVLALEVIKGKHP 806
++ D +S GV+ + G P
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 130 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 185
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 186 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAVILSNDAAA--------KNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V+ D + +T R ++K I +A
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 130 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 185
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD++S GV+ ++ G P
Sbjct: 186 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 610 IGKGGQGSVYMSKLASGEI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A E +A+KK P + T + E+ + + H+NI+ +
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 92
Query: 669 FCL------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN 722
+ ++IV E VI L R ++ ++ + ++H+
Sbjct: 93 VFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLHS 146
Query: 723 DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 782
I+HRD+ N+++ + + DFG+A+ S T Y APE+ M
Sbjct: 147 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMVPFVVTRYYRAPEVILGM 202
Query: 783 KVTEKCDVYSFGVLALEVIKG 803
E D++S G + E+IKG
Sbjct: 203 GYKENVDIWSVGCIMGEMIKG 223
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 649 LNEVKALTEI-WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRM 707
L EV L ++ H NI+++ F+V++ K L L+ + M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 708 NMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTEL 767
+ ++ AL ++ IVHRD+ +N+LLD + ++DFG + L P E+
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 183
Query: 768 AGTYGYVAPEL----------AYTMKVTEKCDVYSFGVLALEVIKGKHP 806
GT Y+APE+ Y +V D++S GV+ ++ G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 610 IGKGGQGSVYMS-KLASGEIIAVKKFH-----SPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G+G G VY + + E +A+K+ +PG + EV L E+ HRNI
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA------IREVSLLKELQHRNI 95
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKG----IVDALSY 719
+++ H L +++EY + + N + M +IK +++ +++
Sbjct: 96 IELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVS--------MRVIKSFLYQLINGVNF 147
Query: 720 MHN-DCFPPIVHRDISSKNVLLDFENEAH-----VSDFGIAKFLKPDSSNWTELAGTYGY 773
H+ C +HRD+ +N+LL + + + DFG+A+ +T T Y
Sbjct: 148 CHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWY 203
Query: 774 VAPE-LAYTMKVTEKCDVYSFGVLALEVI 801
PE L + + D++S + E++
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 610 IGKGGQGSVYMS------KLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI 663
+G G G V ++ K + +II+ +KF E E++ L ++ H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND 723
+K+ F +IV E + L + + K T ++ + ++ A+ Y+H +
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN 133
Query: 724 CFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780
I+HRD+ +NVLL + E ++DFG +K L ++S L GT Y+APE+
Sbjct: 134 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 189
Query: 781 TMKVT---EKCDVYSFGVLALEVIKGKHP 806
++ D +S GV+ + G P
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EAHVSDFGIAKFLKPDSSNWTELA 768
I + Y+H +VHRD+ N+L E+ + DFG AK L+ ++
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 769 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
T +VAPE+ CD++S GVL + G P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 128
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 129 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 182
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 183 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 842 K 842
+
Sbjct: 301 R 301
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 91
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 92 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 145
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 146 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 842 K 842
+
Sbjct: 264 R 264
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 89
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 90 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 143
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 144 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 201
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 202 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 261
Query: 842 K 842
+
Sbjct: 262 R 262
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 83/205 (40%), Gaps = 23/205 (11%)
Query: 610 IGKGGQG-SVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G G + M S E++AVK + ++E +N + H NIV+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L HL IV EY L + N A + ++ +SY H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCHA---MQV 136
Query: 729 VHRDISSKNVLLDFENEAH--VSDFGIAK----FLKPDSSNWTELAGTYGYVAPELAYTM 782
HRD+ +N LLD + FG +K +P S+ GT Y+APE+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-----VGTPAYIAPEVLLKK 191
Query: 783 KVTEK-CDVYSFGVLALEVIKGKHP 806
+ K DV+S GV ++ G +P
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 83
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 84 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 137
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 138 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 842 K 842
+
Sbjct: 256 R 256
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 91 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 144
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 145 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 842 K 842
+
Sbjct: 263 R 263
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 84
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 85 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 138
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 139 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 842 K 842
+
Sbjct: 257 R 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 84
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 85 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 138
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 139 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 842 K 842
+
Sbjct: 257 R 257
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 90
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 91 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 144
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 145 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 842 K 842
+
Sbjct: 263 R 263
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 91
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 92 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 145
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 146 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 842 K 842
+
Sbjct: 264 R 264
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 33/271 (12%)
Query: 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G+GG V + + L G A+K+ L E ++E E H NI+++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRI---LCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 669 FCLHVR----HLFIVYEYFKMCSLAVILSNDAAAKN-LGWTRRMNMIKGIVDALSYMHND 723
+CL R +++ +FK +L + N L + + ++ GI L +H
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153
Query: 724 CFPPIVHRDISSKNVLLDFENEAHVSDFGI--AKFLKPDSS-------NWTELAGTYGYV 774
+ HRD+ N+LL E + + D G + + S +W T Y
Sbjct: 154 GY---AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 775 APELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831
APEL + E+ DV+S G + ++ G+ P D + S+ L + +++ P+
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVALAVQ-NQLSIPQ 268
Query: 832 LPTPSRNVHDKLISIVEVTISCVDENPESRP 862
P S + L S++ V +P RP
Sbjct: 269 SPRHSSALWQLLNSMMTV-------DPHQRP 292
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 610 IGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G QG V + A +A+KK P + T + E+ + + H+NI+ +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 128
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSN----DAAAKNLGWTRRMNMIKGIVDALSYMHNDC 724
+ L E F+ L + L + L R ++ ++ + ++H+
Sbjct: 129 VFTPQKTL----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS-- 182
Query: 725 FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 784
I+HRD+ N+++ + + DFG+A+ S T T Y APE+ M
Sbjct: 183 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 785 TEKCDVYSFGVLALEVIKGK--HP-RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841
E D++S G + E+++ K P RD+I + L E + PT V +
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 842 K 842
+
Sbjct: 301 R 301
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 610 IGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
+G+G +VY K + ++A+K+ L E + EV L ++ H NIV ++
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
+ L +V+EY L L + N+ + + ++ L+Y H +
Sbjct: 68 IIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLF--LFQLLRGLAYCHRQ---KV 121
Query: 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEK 787
+HRD+ +N+L++ E ++DFG+A+ + + T Y P+ L + + +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQ 181
Query: 788 CDVYSFGVLALEVIKGK 804
D++ G + E+ G+
Sbjct: 182 IDMWGVGCIFYEMATGR 198
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 171 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 225
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 166 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 220
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 20/153 (13%)
Query: 670 CLHVRHLFIVYEYF---KMCSLAV--------ILSNDAAAKNLGWTRRM--NMIKGIVDA 716
C H+ + VYE + C L V + S + +T R + K I +A
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEA 173
Query: 717 LSYMHNDCFPPIVHRDISSKNVLLDFENEAHV---SDFGIAKFLKPDSSNWTELAGTYGY 773
+ Y+H+ I HRD+ +N+L + + +DFG AK +S T Y Y
Sbjct: 174 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 229
Query: 774 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
VAPE+ K + CD +S GV+ ++ G P
Sbjct: 230 VAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 82/203 (40%), Gaps = 19/203 (9%)
Query: 610 IGKGGQG-SVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668
IG G G + M S E++AVK + ++E +N + H NIV+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728
L HL IV EY L + N A + ++ +SY H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCHA---MQV 136
Query: 729 VHRDISSKNVLLDFENEAH--VSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKV 784
HRD+ +N LLD + FG +K L S + GT Y+APE+ +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLH---SQPKDTVGTPAYIAPEVLLKKEY 193
Query: 785 TEK-CDVYSFGVLALEVIKGKHP 806
K DV+S GV ++ G +P
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 100/259 (38%), Gaps = 47/259 (18%)
Query: 231 ISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG-PIPILRNLTSLERV 289
+ G SN YLNL EN++ +R+L L +L LG N R + L SL +
Sbjct: 69 VPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTL 128
Query: 290 RLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLD----------- 338
L N+LT S +F L + L N S + R P L LD
Sbjct: 129 ELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYIS 188
Query: 339 --------------FSINNITG--NVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFF 382
+ NI N+ P +G L L++S NH P L+
Sbjct: 189 EGAFEGLFNLKYLNLGMCNIKDMPNLTPLVG----LEELEMSGNHFPEIRPGSFHGLSSL 244
Query: 383 IKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRN-- 440
KL + ++Q+S L L L+L+ N LS S+P L L +L EL L N
Sbjct: 245 KKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SLPHDLFT-PLRYLVELHLHHNPW 302
Query: 441 -----------FLREAIPS 448
+LRE IP+
Sbjct: 303 NCDCDILWLAWWLREYIPT 321
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 124 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 178
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 166 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 220
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 166 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 220
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 158 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 212
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 627 EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFKMC 686
+I+ V KF S PG T ++ E + H +IV++ L++V+E+
Sbjct: 55 KIVDVAKFTSS-PGLST--EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGA 111
Query: 687 SLAV-ILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL-DFEN 744
L I+ A + ++ I++AL Y H++ I+HRD+ +NVLL EN
Sbjct: 112 DLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPENVLLASKEN 168
Query: 745 EAHVS--DFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK 802
A V DFG+A L GT ++APE+ + DV+ GV+ ++
Sbjct: 169 SAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
Query: 803 GKHP 806
G P
Sbjct: 229 GCLP 232
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 146 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 200
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 713 IVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKPDSSNWTELAGTY 771
+++A+ + HN C ++HRDI +N+L+D E + DFG LK + +T+ GT
Sbjct: 139 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 193
Query: 772 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 806
Y PE + Y V+S G+L +++ G P
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,986,129
Number of Sequences: 62578
Number of extensions: 981529
Number of successful extensions: 5343
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 425
Number of HSP's that attempted gapping in prelim test: 2217
Number of HSP's gapped (non-prelim): 1696
length of query: 873
length of database: 14,973,337
effective HSP length: 107
effective length of query: 766
effective length of database: 8,277,491
effective search space: 6340558106
effective search space used: 6340558106
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)